Psyllid ID: psy4233

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
Protein Sequence
MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccccccccccEEEEEcccccHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHccccEEEcccccEEEccEEHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccccccccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEccccHccccccccccccEEEEEEcccccHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccHHcccccHHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEEHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHHcccccccccHHHHccccHccHHHHHHHHccccccccccHHHccc
Coil and Loop (DISEMBL)
mcrvhlkkgtggrssfnGVVATVFGASGYMGSYLCNKlgkqgsqiiipyrgnfydvrdlrlcgdlgqvlfqpyhprnddeIRKAIKYSNVVINLIGREfatknftiadanVEIPARLARLSKEMGVEKFIHISalnadpnpptyyisggsqfyrtkYQGEKEvlrefpeatifrpsdmygsgdKFLRYYGHMWRHVFRKLAVYkkgeetikqpvyVGDVAAAIVAACKdpdaagkiyqavgpkRYLLSELLDWFHVVMkkgepdygyyrydlrydpvmplklfinglfpgypmghltperver
Flexible Loop (DISEMBL)
mcrvhlkkgtggrssfnGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQpyhprnddeiRKAIKYSNVVINLIGREfatknftiadanVEIPARLARLSKEMGVEKFIHisalnadpnppTYYISGGSQFYRTKYQGEKEVLRefpeatifrpsdmygsGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLfpgypmghltperver
Low Complexity Region (SEG)
MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPdygyyrydlrydPVMPLKLFINGLFPGYPMGHLTPERVER
Disordered region (IsUnstruct)
**************SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG*********
Disordered Region (DISOPRED)
******************VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVE*
Disordered Region (DISEMBL)
**********GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER
Disordered Region (DISPRO)
MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTP*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	303	2.2.26 [Sep-21-2011]
P34943	380	NADH dehydrogenase [ubiqu	yes	N/A	0.808	0.644	0.484	8e-66
Q0MQB3	377	NADH dehydrogenase [ubiqu	N/A	N/A	0.801	0.644	0.511	2e-65
Q16795	377	NADH dehydrogenase [ubiqu	yes	N/A	0.801	0.644	0.511	2e-65
P0CB82	377	NADH dehydrogenase [ubiqu	N/A	N/A	0.801	0.644	0.507	4e-65
P0CB81	377	NADH dehydrogenase [ubiqu	yes	N/A	0.801	0.644	0.507	4e-65
Q0MQB4	377	NADH dehydrogenase [ubiqu	yes	N/A	0.801	0.644	0.507	5e-65
Q5BK63	377	NADH dehydrogenase [ubiqu	yes	N/A	0.775	0.623	0.508	2e-64
Q9DC69	377	NADH dehydrogenase [ubiqu	yes	N/A	0.785	0.631	0.514	1e-62
Q9SK66	402	NADH dehydrogenase [ubiqu	yes	N/A	0.808	0.609	0.436	2e-43
P25284	375	NADH-ubiquinone oxidoredu	N/A	N/A	0.755	0.610	0.374	2e-42

>sp|P34943|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1

 Score =  250 bits (639), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 124/256 (48%), Positives = 176/256 (68%), Gaps = 11/256 (4%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +  G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R   YD   LR  GDL
Sbjct: 41  IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDL 100

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQ++F  ++ R+ D IR+A+++S+VVINL+GRE+ T+NF   D  V+IP  +A++SKE G
Sbjct: 101 GQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAG 160

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VEKFIHIS LNAD       I   S++ R+K  GEKEV   FPEATI +P++++G  D+F
Sbjct: 161 VEKFIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRF 213

Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
           L Y+ ++ W   F  + +   G++T+KQPVY+ DV   I+ A KDPDA GK +  VGP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSR 270

Query: 245 YLLSELLDWFHVVMKK 260
           YLL +L+ +   V  +
Sbjct: 271 YLLFDLVQYVFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
Bos taurus (taxid: 9913)

>sp|Q0MQB3|NDUA9_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2

 Score =  249 bits (637), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct: 44  GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           LF  +  R+ D IR+ +++SNVVINLIGR++ TKNF   D  V+IP  +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD++G  D+FL  
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216

Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
           +  M  H F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL 
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274

Query: 249 ELLDWFHVVMKK 260
            L+ +   V  +
Sbjct: 275 HLVKYIFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Gorilla gorilla gorilla (taxid: 9595)

>sp|Q16795|NDUA9_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2

 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct: 44  GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           LF  +  R+ D IR+ +++SNVVINLIGR++ TKNF   D  V+IP  +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD++G  D+FL  
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 216

Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
           +  M  H F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL 
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274

Query: 249 ELLDWFHVVMKK 260
            L+ +   V  +
Sbjct: 275 HLVKYIFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Homo sapiens (taxid: 9606)

>sp|P0CB82|NDUA9_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1

 Score =  248 bits (633), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct: 44  GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           LF  +  R+ D IR+ +++SNVVINLIGR++ T+NF   D  V+IP  +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD++G  D+FL  
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216

Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
           +  M  H F    +   G +T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL 
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274

Query: 249 ELLDWFHVVMKK 260
            L+ +   V  +
Sbjct: 275 HLVKYIFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pongo pygmaeus (taxid: 9600)

>sp|P0CB81|NDUA9_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1

 Score =  248 bits (633), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct: 44  GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           LF  +  R+ D IR+ +++SNVVINLIGR++ T+NF   D  V+IP  +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD++G  D+FL  
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216

Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
           +  M  H F    +   G +T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL 
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274

Query: 249 ELLDWFHVVMKK 260
            L+ +   V  +
Sbjct: 275 HLVKYIFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pongo abelii (taxid: 9601)

>sp|Q0MQB4|NDUA9_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1

 Score =  248 bits (632), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 9/252 (3%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct: 44  GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           LF  +  R+ D IR+ +++SNVVINLIGR++ TKN+   D  V+IP  +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD++G  D+FL  
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216

Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
           +  M  H F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL 
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274

Query: 249 ELLDWFHVVMKK 260
            L+ +   V  +
Sbjct: 275 HLVKYIFAVAHR 286

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pan troglodytes (taxid: 9598)

>sp|Q5BK63|NDUA9_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2

 Score =  246 bits (628), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/246 (50%), Positives = 165/246 (67%), Gaps = 11/246 (4%)

Query: 9   GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
           G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD   LRL GDLGQ+
Sbjct: 44  GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQL 103

Query: 69  LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
           +F  +  R+ D IRKA+++SNVVINLIGRE+ T+NF   D  V IP  +A+ SKE GVE+
Sbjct: 104 IFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 163

Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
           FIH+S LNA        +   ++  R+K  GEKEV   FP+A I RPSDM+G  D+FL +
Sbjct: 164 FIHVSHLNAS-------MKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNH 216

Query: 189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
           +  + W   F  + +   G +T+KQPVYV DV+  I  A K+PDA GK +   GP RYLL
Sbjct: 217 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIANATKNPDAIGKTFAFTGPNRYLL 273

Query: 248 SELLDW 253
             L+ +
Sbjct: 274 FHLVKY 279

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Rattus norvegicus (taxid: 10116)

>sp|Q9DC69|NDUA9_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=2

 Score =  240 bits (612), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 167/249 (67%), Gaps = 11/249 (4%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +  G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LRL GDL
Sbjct: 41  IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDL 100

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQ+ F  +  R+ D IRKA+++SNVVINLIGRE+ T+NF   D  V IP  +A+ SKE G
Sbjct: 101 GQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG 160

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+S LNA        +   S+  R+K  GEKEV   FPEA I RPSD++G  D+F
Sbjct: 161 VERFIHVSHLNA-------SMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRF 213

Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
           L ++  + W   F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +   GP R
Sbjct: 214 LNHFANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNR 270

Query: 245 YLLSELLDW 253
           YLL  L+ +
Sbjct: 271 YLLFHLVKY 279

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Mus musculus (taxid: 10090)

>sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2 SV=2

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 162/261 (62%), Gaps = 16/261 (6%)

Query: 5   HL-KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
           HL +KGTGGRSS +G+VATVFGA+G++G YL  +L K GSQ+++P+RG+    R L+L G
Sbjct: 54  HLARKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMG 113

Query: 64  DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
           DLGQV+   + PR++D I+  +  +NVVINLIGRE+ T+NF+  DAN  I  +LA ++KE
Sbjct: 114 DLGQVVPMKFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKE 173

Query: 124 M-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
             G+ ++I +S L A        +S  S+  R K   E+ VL   PEATI RP+ M G+ 
Sbjct: 174 HGGIMRYIQVSCLGAS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTE 226

Query: 183 DKFLRYYGHMWRHVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQA 239
           D+ L    + W    +K        G  T  QPVYV DVAAAIVAA KD  ++ GK Y+ 
Sbjct: 227 DRIL----NPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYEL 282

Query: 240 VGPKRYLLSELLDWFHVVMKK 260
            GP  +   EL +  + ++++
Sbjct: 283 GGPDVFTTHELAEIMYDMIRE 303

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Arabidopsis thaliana (taxid: 3702)

>sp|P25284|NDUA9_NEUCR NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-40 PE=1 SV=2

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 14/243 (5%)

Query: 8   KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
           +  GGRSS  G  ATVFGA+G +G Y+ N+L +QG  ++IP+R   Y+ R L++ GDLG+
Sbjct: 41  RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99

Query: 68  VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
           V+   +  RN   I +++++S+VV NLIGR++ TKNF+  D ++E   R+A    +  V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159

Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
           +FIH+S+ NADPN          +F+ TK +GE+ V   FPE TI RP+ M+G  D+ L 
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212

Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
               +      K  +   G +    PV+V DV  A+     D + A + ++  GPK Y  
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTASETFELYGPKTYTT 266

Query: 248 SEL 250
           +E+
Sbjct: 267 AEI 269

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
195127640	417	GI13402 [Drosophila mojavensis] gi|19391	0.983	0.714	0.615	1e-106
195378672	417	GJ11526 [Drosophila virilis] gi|19415526	0.983	0.714	0.598	1e-105
170059692	401	NADH-ubiquinone oxidoreductase 39 kda su	0.983	0.743	0.605	1e-103
195021200	417	GH14554 [Drosophila grimshawi] gi|193898	0.983	0.714	0.591	1e-103
195480057	416	GE23238 [Drosophila yakuba] gi|194186422	0.983	0.716	0.581	1e-102
312380419	421	hypothetical protein AND_07551 [Anophele	0.983	0.707	0.575	1e-102
195348289	416	GM22299 [Drosophila sechellia] gi|195495	0.983	0.716	0.581	1e-102
158298342	385	AGAP010792-PA [Anopheles gambiae str. PE	0.983	0.774	0.585	1e-102
194874988	416	GG16121 [Drosophila erecta] gi|190655286	0.983	0.716	0.578	1e-102
91080689	398	PREDICTED: similar to NADH-ubiquinone ox	0.980	0.746	0.588	1e-102

>gi|195127640|ref|XP_002008276.1| GI13402 [Drosophila mojavensis] gi|193919885|gb|EDW18752.1| GI13402 [Drosophila mojavensis]

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/299 (61%), Positives = 232/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+  D   L++CGDL
Sbjct: 52  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDAIRLKVCGDL 111

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  YH  +   IR+A+K+SNVVINL+GR++ TKNF   D NV   ARLA + +E G
Sbjct: 112 GQVLFHFYHLDDPRSIREAVKHSNVVINLVGRDYETKNFRFKDVNVNGAARLASICRESG 171

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+SALNA+ NP  +YISGGSQ+ +TKY+GE  V   FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKPHYISGGSQWLKTKYEGELMVRDAFPNATIIRPADIYGSEDRF 231

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE T+KQPVYV DVA AIV A KDPD AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHKGERTVKQPVYVSDVAQAIVNAAKDPDTAGRIYQAVGPKRY 291

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK+ +  L  PG P+G L  +RVER
Sbjct: 292 QLSELVDWFHRLMRKDQKGWGYQRYDMRWDPTFKLKVKLTNLICPGAPIGGLHLDRVER 350

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195378672|ref|XP_002048107.1| GJ11526 [Drosophila virilis] gi|194155265|gb|EDW70449.1| GJ11526 [Drosophila virilis]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/299 (59%), Positives = 231/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+  D   L++CGDL
Sbjct: 52  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDANRLKVCGDL 111

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  YH  +   IR+A+K+SNVVINL+GR++ TKNF   D NV   ARLA + ++ G
Sbjct: 112 GQVLFHFYHLEDPRSIREAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRDAG 171

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+SALNA+ NP  +YISGGSQ+ ++KY+GE  V   FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKAHYISGGSQWLKSKYEGELMVRDAFPNATIIRPADIYGSEDRF 231

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++  GE T+KQPV+V DVA AIV A KDPD AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHSGERTVKQPVFVSDVAQAIVNAAKDPDTAGRIYQAVGPKRY 291

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK+ +  L  PG P+G L  +RVER
Sbjct: 292 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFKLKVKLTNLICPGAPIGGLHLDRVER 350

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059692|ref|XP_001865472.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex quinquefasciatus] gi|167878361|gb|EDS41744.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex quinquefasciatus]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/299 (60%), Positives = 226/299 (75%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           LK+GTGGRSSFNGVVATVFGA+G++G Y+CNKLGK GSQ+IIPYR + Y+   L+LCGDL
Sbjct: 45  LKRGTGGRSSFNGVVATVFGATGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLCGDL 104

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF PYH  +++ I KA+KYSNVVINL+GR++ TKNF   D +VE   RLAR++K+ G
Sbjct: 105 GQVLFHPYHLCDEESIYKAVKYSNVVINLVGRDWETKNFAFQDVHVEGARRLARIAKQAG 164

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VEKFIHIS+LNA P+P       GS+F ++KY GEK V  EFP+A +FRPSD+YG  D+F
Sbjct: 165 VEKFIHISSLNATPHPEPILTKEGSKFLKSKYAGEKAVREEFPDAIVFRPSDIYGQEDRF 224

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++  GE TIKQPVY GDVA  IV A KD D+ G+ YQAVGP+RY
Sbjct: 225 LRYYAHIWRRQFRGMPLWYSGERTIKQPVYCGDVAQGIVNAIKDSDSQGQTYQAVGPRRY 284

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH  M+K +  +GY RYDLRYDP   +K+ +     P +P+G L  ERVER
Sbjct: 285 KLSELVDWFHREMRKDKEWWGYQRYDLRYDPTFMIKVKLTEFICPSFPVGDLHTERVER 343

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195021200|ref|XP_001985349.1| GH14554 [Drosophila grimshawi] gi|193898831|gb|EDV97697.1| GH14554 [Drosophila grimshawi]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/299 (59%), Positives = 231/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+  DV  L++CGDL
Sbjct: 52  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDESDVIRLKVCGDL 111

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  Y+  +   IR A+K+SNVVINL+GR++ TKNF   D NV   ARLA + ++ G
Sbjct: 112 GQVLFHFYNLEDPRSIRDAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRDSG 171

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+SALNA+ NP  + ISGGSQ+ ++KY+GE +V   FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKAHCISGGSQWLKSKYEGELQVRDAFPNATIIRPADIYGSEDRF 231

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++  GE T+KQPV+V DVA AIV A KDPD+AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHNGELTVKQPVFVSDVAQAIVNAAKDPDSAGRIYQAVGPKRY 291

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK  +  L  PG P+G L  +R+ER
Sbjct: 292 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFKLKARLTSLICPGAPVGGLHLDRIER 350

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195480057|ref|XP_002086632.1| GE23238 [Drosophila yakuba] gi|194186422|gb|EDX00034.1| GE23238 [Drosophila yakuba]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/299 (58%), Positives = 231/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+  DV  L++ GDL
Sbjct: 51  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDL 110

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  Y+  +   IR+A+K+SNVVINL+GR+F TKNF   D +V    R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+S+LN + NP   Y+ GGS++ ++KY+GE  V   FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK  +N    PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312380419|gb|EFR26417.1| hypothetical protein AND_07551 [Anopheles darlingi]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/299 (57%), Positives = 228/299 (76%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFG++G++G Y+CNKLGK GSQ+IIPYR + Y+   L+L GDL
Sbjct: 65  IKRGTGGRSSFNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEALRLKLVGDL 124

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF PY  R++D IRKA+KYSNVVINL+GR++ TKNF+  D +VE   RLAR+++E G
Sbjct: 125 GQVLFHPYDLRDEDAIRKAVKYSNVVINLVGRDWETKNFSFKDVHVEGARRLARIAREAG 184

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VEKF+H+S+LNA P P  ++   GS+F ++KY GE  V  EFP+A +FRP+D+YG  D+F
Sbjct: 185 VEKFVHVSSLNATPTPQPFFTKEGSKFLQSKYYGELAVREEFPDAIVFRPADIYGQEDRF 244

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE TIKQPVY  D+A  I+ A KD D+ G+ YQAVGP+RY
Sbjct: 245 LRYYAHIWRRQFRAMPLWYKGERTIKQPVYCSDLAQGIINAIKDSDSQGQTYQAVGPRRY 304

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLK-LFINGLFPGYPMGHLTPERVER 303
            LS L+DWFH +M+K E  +GY+RYDLRYDP   +K L    + P +P+G +  ER+ER
Sbjct: 305 KLSVLVDWFHQIMRKDEKWWGYFRYDLRYDPTFRIKALLTETISPSFPIGDVHTERIER 363

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195348289|ref|XP_002040681.1| GM22299 [Drosophila sechellia] gi|195495852|ref|XP_002095444.1| GE19689 [Drosophila yakuba] gi|194122191|gb|EDW44234.1| GM22299 [Drosophila sechellia] gi|194181545|gb|EDW95156.1| GE19689 [Drosophila yakuba]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/299 (58%), Positives = 231/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+  DV  L++ GDL
Sbjct: 51  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDL 110

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  Y+  +   IR+A+K+SNVVINL+GR+F TKNF   D +V    R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+S+LN + NP   Y+ GGS++ ++KY+GE  V   FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK  +N    PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158298342|ref|XP_318516.3| AGAP010792-PA [Anopheles gambiae str. PEST] gi|157014355|gb|EAA13714.3| AGAP010792-PA [Anopheles gambiae str. PEST]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/299 (58%), Positives = 227/299 (75%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFG++G++G Y+CNKLGK GSQ+IIPYR + Y+   L+L GDL
Sbjct: 29  MKRGTGGRSSFNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLVGDL 88

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF PY  R+++ I KA+KYSNVVINL+GR++ TKNFT  D +V+   RLAR+++E G
Sbjct: 89  GQVLFHPYDLRDEEAIYKAVKYSNVVINLVGRDWETKNFTFKDVHVDGARRLARIAREAG 148

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE F+H+S+LNA PNP  ++   GS+F  +KY GE  V  EFP+A +FRPSD+YG  D+F
Sbjct: 149 VETFVHVSSLNATPNPQPFFTKEGSKFLASKYYGELAVREEFPDAIVFRPSDIYGQEDRF 208

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE TIKQPVY  D+A  IV A KD D+ G+ YQAVGP+RY
Sbjct: 209 LRYYAHIWRRQFRAMPLWYKGERTIKQPVYCSDLAQGIVNAIKDSDSQGQTYQAVGPRRY 268

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LS L+DWFH VM+K E  +GYYRYDLRYDP   +K+ +  L  P +P+G +  ERVER
Sbjct: 269 KLSALVDWFHQVMRKDEKWWGYYRYDLRYDPTFRMKVLLTELVSPSFPIGDVHTERVER 327

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194874988|ref|XP_001973503.1| GG16121 [Drosophila erecta] gi|190655286|gb|EDV52529.1| GG16121 [Drosophila erecta]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/299 (57%), Positives = 231/299 (77%), Gaps = 1/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+  DV  L++ GDL
Sbjct: 51  MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDL 110

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQVLF  Y+  +   IR+A+K+SNVVINL+GR+F TKNF   D +V    R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+S+LN + NP   Y+ GGS++ ++KY+GE  V   FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYY H+WR  FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHVWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
            LSEL+DWFH +M+K +  +GY RYD+R+DP   LK  +N    PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080689|ref|XP_975235.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 39 kda subunit [Tribolium castaneum] gi|270006426|gb|EFA02874.1| hypothetical protein TcasGA2_TC007967 [Tribolium castaneum]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/299 (58%), Positives = 235/299 (78%), Gaps = 2/299 (0%)

Query: 6   LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
           LK+GTGGRSSFNG+VATVFG  G++G Y+CN+LGK GSQ+I+PYRG+ YDV  L++CGDL
Sbjct: 41  LKRGTGGRSSFNGIVATVFGCGGFIGRYVCNRLGKNGSQLILPYRGDPYDVMRLKVCGDL 100

Query: 66  GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
           GQV F P+  R+++ I K  +YSNVVINLIGR++ T+NF+  D +V+    LA+++K  G
Sbjct: 101 GQVYFHPFDLRDEESIEKVCRYSNVVINLIGRDWETRNFSFDDVHVKGARLLAKVAKRSG 160

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
           VE+FIH+SALNA+  P    + GGS+F  +K++GE+ VL EFPEATIFRP+D+YG  D+F
Sbjct: 161 VERFIHLSALNAEETPEAVILKGGSKFLASKWRGEQAVLEEFPEATIFRPADVYGQEDRF 220

Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
           LRYYGH+WR     L ++KKGEETIKQPV+V D+A+ I+AA KD D AGK+YQAVGPKRY
Sbjct: 221 LRYYGHIWRRQATYLPLWKKGEETIKQPVFVSDLASGIMAALKDSDTAGKVYQAVGPKRY 280

Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN-GLFPGYPMGHLTPERVER 303
            LSEL+DWF  VM+K + D+GY+RYD+RYDP+  +++ +   L  G+P+G+L  ERVER
Sbjct: 281 YLSELVDWFFRVMRK-DKDWGYWRYDMRYDPIFQIRVTLTEKLRVGFPIGNLHWERVER 338

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
FB|FBgn0037001	416	CG6020 [Drosophila melanogaste	0.983	0.716	0.555	1.7e-89
UNIPROTKB|F1SL07	377	LOC100524622 "Uncharacterized	0.788	0.633	0.516	4.2e-63
UNIPROTKB|E2RJR2	377	NDUFA9 "Uncharacterized protei	0.775	0.623	0.532	2.3e-62
WB|WBGene00021800	431	Y53G8AL.2 [Caenorhabditis eleg	0.821	0.577	0.52	7.9e-62
UNIPROTKB|P34943	380	NDUFA9 "NADH dehydrogenase [ub	0.788	0.628	0.496	2.7e-61
MGI|MGI:1913358	377	Ndufa9 "NADH dehydrogenase (ub	0.775	0.623	0.520	1.5e-60
UNIPROTKB|Q16795	377	NDUFA9 "NADH dehydrogenase [ub	0.815	0.655	0.507	1.9e-60
UNIPROTKB|Q5ZI00	378	NDUFA9 "Uncharacterized protei	0.788	0.632	0.496	2.4e-60
ZFIN|ZDB-GENE-050320-20	380	ndufa9 "NADH dehydrogenase (ub	0.798	0.636	0.476	3.1e-60
RGD|1307307	377	Ndufa9 "NADH dehydrogenase (ub	0.775	0.623	0.508	2.2e-59

FB|FBgn0037001 CG6020 [Drosophila melanogaster (taxid:7227)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 166/299 (55%), Positives = 219/299 (73%)

Query:     6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
             +K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+  DV  L++ GDL
Sbjct:    51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDL 110

Query:    66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
             GQVLF  Y+  +   IR A+K+SNVVINL+GR+F TKNF   D +V    R+AR+++E G
Sbjct:   111 GQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170

Query:   126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
             VE+ IH+S+LN + NP   Y+ GGS++ ++KY+GE  V   FP ATI RP+D+YGS D+F
Sbjct:   171 VERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230

Query:   186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
             LRYY H+WR  FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG+IYQAVGPKRY
Sbjct:   231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRY 290

Query:   246 LLSELLDWFHVVMKKGEPXXXXXXXXXXXXPVMPLKLFINGLF-PGYPMGHLTPERVER 303
              LSEL+DWFH +M+K +             P   LK  +N    PG P+G L P R+ER
Sbjct:   291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

GO:0005747 "mitochondrial respiratory chain complex I" evidence=ISS

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=ISS

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

UNIPROTKB|F1SL07 LOC100524622 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 129/250 (51%), Positives = 172/250 (68%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR   YD   LR  GDLGQ+
Sbjct:    44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDLGQI 103

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
             +F  ++ ++ D IRK +++SNVVINL+GRE+ TKNF   D  V+IP  +A++SKE GVEK
Sbjct:   104 IFMEWNGKDKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKEAGVEK 163

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
              IHIS LNAD   P+ Y+       R+K  GEKEV   FPEATI +PSD++G  D+FL Y
Sbjct:   164 LIHISHLNADIKSPSRYL-------RSKAVGEKEVRAAFPEATIIKPSDIFGREDRFLNY 216

Query:   189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             +  M W   F  + +   G+ET+KQPVY+ DV+  I+ A KDPDA GK +  VGP RYLL
Sbjct:   217 FASMRW---FGGVPLISLGKETVKQPVYIVDVSKGIINAIKDPDAKGKTFAFVGPNRYLL 273

Query:   248 SELLDWFHVV 257
              +L+ +   V
Sbjct:   274 FDLVQYIFAV 283

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2RJR2 NDUFA9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 131/246 (53%), Positives = 171/246 (69%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD   LR  GDLGQ+
Sbjct:    44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDPYDTMHLRPMGDLGQI 103

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
             +F  +  RN D I++A+K+SNVVINLIGRE+ TKNF   D  V+IP  +A++SKE GVEK
Sbjct:   104 IFLEWDGRNKDSIQRAVKHSNVVINLIGREWETKNFDFEDVFVKIPQAIAKVSKEAGVEK 163

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
             FIH+S LNAD       I   S++ R K  GEKEV   FPEA I +PSD++G  D+FL +
Sbjct:   164 FIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNH 216

Query:   189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             + +  W   F  + +   G++T+KQPVYV DV+  IV A KDPDA GK +  VGP RYLL
Sbjct:   217 FANTRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVNAIKDPDAKGKSFAFVGPNRYLL 273

Query:   248 SELLDW 253
              +L+ +
Sbjct:   274 FDLVQY 279

GO:0000166 "nucleotide binding" evidence=IEA

WB|WBGene00021800 Y53G8AL.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 130/250 (52%), Positives = 166/250 (66%)

Query:     7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
             +KG GGR+SF+G V TVFGASG++G  + NK  K GSQIIIPYR + Y +R+ ++ G+LG
Sbjct:    48 RKGAGGRASFSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGELG 107

Query:    67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
             QVL+ P+   +++ IRKA+KYSNVVINLIG    T  +   D N     RLAR+ KEMGV
Sbjct:   108 QVLYFPFELMDEESIRKAVKYSNVVINLIGTRVPTGKYNYYDVNDTGARRLARICKEMGV 167

Query:   127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
             EKF+H+SAL A   P   +    SQF  +K  GE  V  EFPEATI RPS +YG  D F+
Sbjct:   168 EKFVHLSALGATTQPQKGHFVAKSQFLHSKGLGEVAVREEFPEATIIRPSVIYGELDGFI 227

Query:   187 RYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
             +YY   WR      + +YKKGEET K P++VGDVAA I +A  DP A G  Y+ VGP  Y
Sbjct:   228 QYYVSRWRKTPLDYVYLYKKGEETYKMPIWVGDVAAGIQSAVNDPTAKGHTYEFVGPHCY 287

Query:   246 LLSELLDWFH 255
              LSEL+D+ +
Sbjct:   288 QLSELIDFMY 297

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|P34943 NDUFA9 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 124/250 (49%), Positives = 174/250 (69%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R   YD   LR  GDLGQ+
Sbjct:    44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQI 103

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
             +F  ++ R+ D IR+A+++S+VVINL+GRE+ T+NF   D  V+IP  +A++SKE GVEK
Sbjct:   104 IFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAGVEK 163

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
             FIHIS LNAD       I   S++ R+K  GEKEV   FPEATI +P++++G  D+FL Y
Sbjct:   164 FIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNY 216

Query:   189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             + ++ W   F  + +   G++T+KQPVY+ DV   I+ A KDPDA GK +  VGP RYLL
Sbjct:   217 FANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSRYLL 273

Query:   248 SELLDWFHVV 257
              +L+ +   V
Sbjct:   274 FDLVQYVFAV 283

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0070469 "respiratory chain" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1913358 Ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Mus musculus (taxid:10090)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 128/246 (52%), Positives = 166/246 (67%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+  LRL GDLGQ+
Sbjct:    44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDLGQL 103

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
              F  +  R+ D IRKA+++SNVVINLIGRE+ T+NF   D  V IP  +A+ SKE GVE+
Sbjct:   104 TFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 163

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
             FIH+S LNA        +   S+  R+K  GEKEV   FPEA I RPSD++G  D+FL +
Sbjct:   164 FIHVSHLNAS-------MKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNH 216

Query:   189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             +  + W   F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +   GP RYLL
Sbjct:   217 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNRYLL 273

Query:   248 SELLDW 253
               L+ +
Sbjct:   274 FHLVKY 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003954 "NADH dehydrogenase activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070469 "respiratory chain" evidence=IEA

UNIPROTKB|Q16795 NDUFA9 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 132/260 (50%), Positives = 173/260 (66%)

Query:     2 CR-VH---LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR 57
             CR +H   +  G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ 
Sbjct:    33 CRQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIM 92

Query:    58 DLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL 117
              LR  GDLGQ+LF  +  R+ D IR+ +++SNVVINLIGR++ TKNF   D  V+IP  +
Sbjct:    93 HLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAI 152

Query:   118 ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
             A+LSKE GVEKFIH+S LNA+       I   S++ R K  GEK V   FPEA I +PSD
Sbjct:   153 AQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSD 205

Query:   178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
             ++G  D+FL  +  M  H F  + +   G +T+KQPVYV DV+  IV A KDPDA GK +
Sbjct:   206 IFGREDRFLNSFASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSF 263

Query:   238 QAVGPKRYLLSELLDWFHVV 257
               VGP RYLL  L+ +   V
Sbjct:   264 AFVGPSRYLLFHLVKYIFAV 283

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003954 "NADH dehydrogenase activity" evidence=IMP;NAS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=NAS

GO:0006814 "sodium ion transport" evidence=NAS

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0031966 "mitochondrial membrane" evidence=IDA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IDA

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=NAS

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0022904 "respiratory electron transport chain" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5ZI00 NDUFA9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 124/250 (49%), Positives = 174/250 (69%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G  GRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+  LR  GDLGQ+
Sbjct:    45 GRTGRSSVSGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQL 104

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
             LF  +  ++ D  R+A+++SNVVINL+G+E+ TKNF+  D  V IP  +A++++E GVE 
Sbjct:   105 LFLEWDCKDKDSTRRAVEHSNVVINLVGKEWETKNFSFEDEFVNIPKSIAQITREAGVET 164

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
              IHIS LNA    P+ Y+       R+K  GEK V  EFP+A I +PS+M+G  D+FL +
Sbjct:   165 LIHISHLNASMKSPSKYL-------RSKAVGEKAVREEFPDAVIMKPSEMFGREDRFLNH 217

Query:   189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             Y +M W   F  + +   G++T+KQPVYV DVA AI+ A KDPDA GK Y  VGP RYLL
Sbjct:   218 YANMRW---FGGVPLISLGKKTVKQPVYVVDVAKAIINAVKDPDAKGKTYALVGPNRYLL 274

Query:   248 SELLDWFHVV 257
              +++++ + V
Sbjct:   275 YDMIEYIYAV 284

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050320-20 ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Danio rerio (taxid:7955)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 119/250 (47%), Positives = 175/250 (70%)

Query:     8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
             +G GGRSS +G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+  LR  GDLGQ
Sbjct:    45 RGKGGRSSISGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 104

Query:    68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
             ++F  + PRN + I++AI +SNVVINL+GRE+ T N+   D  V IP ++AR ++E G++
Sbjct:   105 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATREAGIK 164

Query:   128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
             KFIH+S LNAD   P+ Y+       R K  GE+ V  EFP+A I +PS+++G  D+FL 
Sbjct:   165 KFIHMSHLNADIRSPSKYL-------RNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLN 217

Query:   188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             ++ +M R     + +   G++T+KQPV+V DVA AI+ A +DP+A GK Y  VGP RYLL
Sbjct:   218 HFANM-RWFGTAVPLIAMGKKTVKQPVHVVDVAKAIINAIQDPEANGKTYALVGPNRYLL 276

Query:   248 SELLDWFHVV 257
              +L+++ + V
Sbjct:   277 HDLVEYLYSV 286

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0001666 "response to hypoxia" evidence=IDA

RGD|1307307 Ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Rattus norvegicus (taxid:10116)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 125/246 (50%), Positives = 165/246 (67%)

Query:     9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
             G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD   LRL GDLGQ+
Sbjct:    44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQL 103

Query:    69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
             +F  +  R+ D IRKA+++SNVVINLIGRE+ T+NF   D  V IP  +A+ SKE GVE+
Sbjct:   104 IFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 163

Query:   129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
             FIH+S LNA        +   ++  R+K  GEKEV   FP+A I RPSDM+G  D+FL +
Sbjct:   164 FIHVSHLNAS-------MKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNH 216

Query:   189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
             +  + W   F  + +   G +T+KQPVYV DV+  I  A K+PDA GK +   GP RYLL
Sbjct:   217 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIANATKNPDAIGKTFAFTGPNRYLL 273

Query:   248 SELLDW 253
               L+ +
Sbjct:   274 FHLVKY 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0003954 "NADH dehydrogenase activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005747 "mitochondrial respiratory chain complex I" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0022900 "electron transport chain" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=ISO

GO:0070469 "respiratory chain" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5BK63	NDUA9_RAT	No assigned EC number	0.5081	0.7755	0.6233	yes	N/A
Q9SK66	NDUA9_ARATH	No assigned EC number	0.4367	0.8085	0.6094	yes	N/A
Q559Z0	NDUA9_DICDI	No assigned EC number	0.3636	0.7755	0.6601	yes	N/A
Q9DC69	NDUA9_MOUSE	No assigned EC number	0.5140	0.7854	0.6312	yes	N/A
Q0MQB4	NDUA9_PANTR	No assigned EC number	0.5079	0.8019	0.6445	yes	N/A
P34943	NDUA9_BOVIN	No assigned EC number	0.4843	0.8085	0.6447	yes	N/A
Q16795	NDUA9_HUMAN	No assigned EC number	0.5119	0.8019	0.6445	yes	N/A
P0CB81	NDUA9_PONAB	No assigned EC number	0.5079	0.8019	0.6445	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	303
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-108
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-24
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-17
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-15
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	7e-15
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	1e-14
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-14
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-12
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-12
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	4e-12
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	4e-12
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	2e-10
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	4e-09
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-08
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-08
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	1e-08
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-07
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-06
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	6e-06
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	7e-04
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	0.003
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	0.004

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score =  316 bits (811), Expect = e-108
 Identities = 126/286 (44%), Positives = 172/286 (60%), Gaps = 19/286 (6%)

Query: 19  VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
           +V TVFGA+G++G Y+ N+L K+GSQ+I+PYR   Y  R L + GDLGQVLF  +  R+D
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLL-VMGDLGQVLFVEFDLRDD 59

Query: 79  DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
           + IRKA++ S+VVINL+GR + TKNF+  D +VE P RLA+ +KE GVE+ IHISAL AD
Sbjct: 60  ESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISALGAD 119

Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
            N P+ Y+       R+K +GE+ V   FPEATI RPS ++G  D+FL  +  +    F 
Sbjct: 120 ANSPSKYL-------RSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNRFAKLLA--FL 170

Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
                  G +T  QPVYVGDVA AI  A KDP+  GK Y+ VGPK Y L+EL++      
Sbjct: 171 PFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYTLAELVELLR--- 227

Query: 259 KKGEPDYGYYRYDLRYDP-VMPLKLFINGLFPGYPMGHLTPERVER 303
                  G  +  +   P  +   +    L    P   LT +++ER
Sbjct: 228 -----RLGGRKRRVLPLPLWLARLIARVKLLLLLPEPPLTRDQLER 268

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 95.9 bits (239), Expect = 4e-24
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 10/168 (5%)

Query: 21  ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDD 79
             + GA+G++G  L  +L +QG ++ +  R         RL   D   V       R+ D
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVR------NTKRLSKEDQEPVAVVEGDLRDLD 54

Query: 80  EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
            +  A++  +VVI+L G    T++F   + +VE    +   +KE GV+ FI IS+L A  
Sbjct: 55  SLSDAVQGVDVVIHLAGAPRDTRDFC--EVDVEGTRNVLEAAKEAGVKHFIFISSLGAYG 112

Query: 140 NPPTYYISGGSQFY-RTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
           +         S  Y   K + E  +       TI RP  +YG   + +
Sbjct: 113 DLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYGDLARAI 160

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 43/245 (17%)

Query: 21  ATVFGASGYMGSYLCNKLGKQGSQIIIPYRG----NFYDVRDLRLCGDLGQVLFQPYHPR 76
             V G +G++GS+L  +L ++G ++I+  R     +    R     GDL           
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDL----------T 50

Query: 77  NDDEIRKAIKYS--NVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFI 130
           + D + + +     + VI+L  +     +F        ANV    RL   ++  GV++F+
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFV 110

Query: 131 HISALNADPNPPTYYISGGSQFY------RTKYQGEKEVLREFPE----ATIFRPSDMYG 180
             S+     +     I+  +           K   E+ V          A I R  ++YG
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYG 170

Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP--------VYVGDVAAAIVAACKDPDA 232
            G+    +  H+   + R++    +G+  +           +YV DVA AI+ A + PD 
Sbjct: 171 PGN-PDPFVTHVIPALIRRI---LEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPD- 225

Query: 233 AGKIY 237
            G+IY
Sbjct: 226 GGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 73.8 bits (181), Expect = 4e-15
 Identities = 60/285 (21%), Positives = 96/285 (33%), Gaps = 34/285 (11%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V G +G++GS+L  +L   G  +         D     L   L  V F      + D + 
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRG------LDRLRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 83  KAIKYSN-VVINLIGR-----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA-- 134
           +  K     VI+L  +       A+      D NV+    L   ++  GV++F+  S+  
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVS 118

Query: 135 -----LNADPNPPTYYISGGSQFY-RTKYQGEKEVLREFP----EATIFRPSDMYGSGDK 184
                    P             Y  +K   E+ +            I RP ++YG GDK
Sbjct: 119 VVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178

Query: 185 FLRYYGHMWRHVFRKLA------VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
                  +     R+L       V        +  VYV DVA A++ A ++PD  G ++ 
Sbjct: 179 P-DLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD--GGVFN 235

Query: 239 AVGPKR-YLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL 282
                    + EL +     +    P   Y     R D      L
Sbjct: 236 IGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLL 280

Length = 314

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 72.7 bits (179), Expect = 7e-15
 Identities = 59/257 (22%), Positives = 90/257 (35%), Gaps = 84/257 (32%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G+ L  +      ++I   R    D+ D                    D + 
Sbjct: 5   ITGANGQLGTELR-RALPGEFEVIATDRAEL-DITD-------------------PDAVL 43

Query: 83  KAIKYSN--VVINLIGREFATKNFTIAD-----------ANVEIPARLARLSKEMGVEKF 129
           + I+ +   VVIN          +T  D            N      LAR + E+G  + 
Sbjct: 44  EVIRETRPDVVINAAA-------YTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RL 95

Query: 130 IHISALNADPNPPTYYISGG--SQFY-------------RTKYQGEKEVLREFPEATIFR 174
           +HIS         T Y+  G     Y             R+K  GE+ V    P   I R
Sbjct: 96  VHIS---------TDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILR 146

Query: 175 PSDMYGS-GDKFLRYYGHMWRHVFRKLAVYKKGEET------IKQPVYVGDVAAAIVAAC 227
            S +YG  G+ F++    M R     LA  K+G+E          P Y  D+A AI+   
Sbjct: 147 TSWVYGEYGNNFVKT---MLR-----LA--KEGKELKVVDDQYGSPTYTEDLADAILELL 196

Query: 228 KDPDAAGKIYQAVGPKR 244
            + +  G +Y  V    
Sbjct: 197 -EKEKEGGVYHLVNSGE 212

Length = 281

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 64/251 (25%), Positives = 93/251 (37%), Gaps = 65/251 (25%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G  L   L ++G ++I   R             DL           + D + 
Sbjct: 4   ITGATGMLGRALVRLLKERGYEVIGTGRSRASL-----FKLDL----------TDPDAVE 48

Query: 83  KAI-KYS-NVVINLIG------RE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
           +AI  Y  +V+IN          E      + +   NV  P  LAR +KE+G  + IHIS
Sbjct: 49  EAIRDYKPDVIINCAAYTRVDKCESDPELAYRV---NVLAPENLARAAKEVGA-RLIHIS 104

Query: 134 ALNAD---------------PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
               D               PNP   Y   G    ++K  GE  VL   P   I R S +
Sbjct: 105 T---DYVFDGKKGPYKEEDAPNPLNVY---G----KSKLLGEVAVLNANPRYLILRTSWL 154

Query: 179 YGS---GDKFLRYYGHMWRHV--FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233
           YG    G+ F+ +   M R     +++ V       I  P Y  D+A AI+   +     
Sbjct: 155 YGELKNGENFVEW---MLRLAAERKEVNVVHDQ---IGSPTYAADLADAILELIERNSLT 208

Query: 234 GKIYQAVGPKR 244
           G IY       
Sbjct: 209 G-IYHLSNSGP 218

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 46/233 (19%), Positives = 88/233 (37%), Gaps = 45/233 (19%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLC-GDLGQVLFQPYHPRN 77
           V GA+G +G ++  +L  +G Q+      P +    +     +  GDL           +
Sbjct: 4   VVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDL----------TD 53

Query: 78  DDEIRKAIKYSNVVINLIG--REFATKNFTI-ADANVEIPARLARLSKEMGVEKFIHISA 134
            + +  A++  + VI+  G   +   +   +  D N+     L   +K+ GV++F+ +S+
Sbjct: 54  AESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNI----NLIDAAKKAGVKRFVLVSS 109

Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP----SDMYGSGDKFLRYYG 190
           + AD       +     +   K + E  +     + TI RP     D  G+G        
Sbjct: 110 IGADKPSH--PLEALGPYLDAKRKAEDYLRASGLDYTIVRPGGLTDDPAGTG-------- 159

Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
                   ++ +   G      P+   DVA  +  A   P A GK ++  G  
Sbjct: 160 --------RVVLGGDGTRLDG-PISRADVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 48/256 (18%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V GA+G++G  L +KL  +G ++ I  R             +   VL +   P  D    
Sbjct: 4   VTGANGFIGRALVDKLLSRGEEVRIAVR--------NAENAEPSVVLAE--LPDIDSFTD 53

Query: 83  KAIKYSNVVINLIGREFATKNFTIA------DANVEIPARLARLSKEMGVEKFIHISALN 136
                 + V++L  R     +            N E+  RLAR +   GV++F+ +S++ 
Sbjct: 54  -LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVK 112

Query: 137 AD--------------PNPPTYYISGGSQFYRTKYQGEKEVLREFP----EATIFRPSDM 178
            +              P P   Y  G     R+K + E+ +L        E  I RP  +
Sbjct: 113 VNGEGTVGAPFDETDPPAPQDAY--G-----RSKLEAERALLELGASDGMEVVILRPPMV 165

Query: 179 YGSGDK--FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
           YG G +  F R    + R + R L +     +  +  V + ++  AI      P AA   
Sbjct: 166 YGPGVRGNFAR----LMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221

Query: 237 YQAVGPKRYLLSELLD 252
           +          +EL+D
Sbjct: 222 FLVSDGPPVSTAELVD 237

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 51/248 (20%), Positives = 94/248 (37%), Gaps = 40/248 (16%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + G + ++G  L  +L   G  + +  RG         L   +  ++         +E+ 
Sbjct: 5   IIGGTRFIGKALVEELLAAGHDVTVFNRGR----TKPDLPEGVEHIVGDRNDRDALEELL 60

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA----- 137
               + +VV++ I        +T          R     K   V+++I IS+ +      
Sbjct: 61  GGEDF-DVVVDTIA-------YTPRQV-----ERALDAFK-GRVKQYIFISSASVYLKPG 106

Query: 138 ----DPNP--PTYYISGGSQFYRT--KYQGEKEVLRE--FPEATIFRPSDMYGSGDKFLR 187
               +  P      +     +     K   E  ++    FP  TI RP  +YG GD   R
Sbjct: 107 RVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFP-YTIVRPPYIYGPGDYTGR 165

Query: 188 ---YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
              ++  + R   R + V   G  ++ Q ++V D+A A++ A  +P A G I+   G + 
Sbjct: 166 LAYFFDRLARG--RPILVPGDGH-SLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEA 222

Query: 245 YLLSELLD 252
               ELL+
Sbjct: 223 VTWDELLE 230

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 59/257 (22%), Positives = 83/257 (32%), Gaps = 64/257 (24%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP------- 75
           V GA+G++GS L   L  QG           Y VR L         +     P       
Sbjct: 3   VTGATGFLGSNLVRALLAQG-----------YRVRALVR--SGSDAVLLDGLPVEVVEGD 49

Query: 76  -RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
             +   +  A+K  + V +L      +A     +   NVE    +   + E GV + +H 
Sbjct: 50  LTDAASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHT 109

Query: 133 S---ALNADPNPP---TYYISGGSQF---YRTKYQGEKEVLREFPE---ATIFRPSDMYG 180
           S   AL   P+     T   +        YR+K   E EVL    E     I  PS ++G
Sbjct: 110 SSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVFG 169

Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP---------VYVGDVAAAIVAACKDPD 231
            GD+               L          K P         V V DVA   +AA +   
Sbjct: 170 PGDE------GPTSTGLDVLDYLNG-----KLPAYPPGGTSFVDVRDVAEGHIAAMEKGR 218

Query: 232 AAGKIYQAVGPKRYLLS 248
                       RY+L 
Sbjct: 219 RGE---------RYILG 226

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 64.9 bits (158), Expect = 4e-12
 Identities = 46/238 (19%), Positives = 77/238 (32%), Gaps = 38/238 (15%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V GA+G++G  +  +L  +G ++          VR+      L   +          ++R
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRA-------AVRNPEAAAALAGGV-----EVVLGDLR 52

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLAR---LSKEMGVEKFIHISALNADP 139
                      + G    +     +DA   +          +   GV+  + +S L AD 
Sbjct: 53  DPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA 112

Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
             P+          R K   E  +       T  R +  Y                 F +
Sbjct: 113 ASPSALA-------RAKAAVEAALRSSGIPYTTLRRAAFYLG-----------AGAAFIE 154

Query: 200 LAVYKKGEETIK-----QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
            A         +      P+ V DVA A+ AA   P  AG+ Y+  GP+   L+EL  
Sbjct: 155 AAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELAS 212

Length = 275

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 44/230 (19%)

Query: 21  ATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-- 76
           A V GA+G +G +L  +L K    S++    R         R      ++ F     +  
Sbjct: 3   ALVLGATGLVGKHLLRELLKSPYYSKVTAIVR---------R------KLTFPEAKEKLV 47

Query: 77  ----NDDEI-RKAIKYSN--VVINLIG----REFATKNFTIADANVEIPARLARLSKEMG 125
               + + +      + N  V    +G    +  + +NF   D   +   +LA+L+K  G
Sbjct: 48  QIVVDFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVD--HDYVLKLAKLAKAAG 105

Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEATIFRPSDMYGSGDK 184
           V+ F+ +S+L ADP     Y+       + K + E+++ +  F   TIFRP  + G   +
Sbjct: 106 VQHFLLVSSLGADPKSSFLYL-------KVKGEVERDLQKLGFERLTIFRPGLLLGERQE 158

Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
             R    + + + R L+         K P+    VA A+V A     +  
Sbjct: 159 S-RPGERLAQKLLRILSPLGFP--KYK-PIPAETVAKAMVKAALKESSNK 204

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 58/251 (23%), Positives = 87/251 (34%), Gaps = 75/251 (29%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G  L  +L  +G  ++   R    D+ D                P   + + 
Sbjct: 4   ITGANGQLGRELVQQLSPEGRVVVALTRSQL-DLTD----------------PEALERLL 46

Query: 83  KAIKYSNVVINLIGREFATKNFTIADA-----------NVEIPARLARLSKEMGVEKFIH 131
           +AI+  + V+N       T  +T  D            N   P  LAR +   G  + +H
Sbjct: 47  RAIR-PDAVVN-------TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVH 97

Query: 132 IS-------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
           IS               +   NP   Y        ++K  GE+ V    P A I R S +
Sbjct: 98  ISTDYVFDGEGKRPYREDDATNPLNVY-------GQSKLAGEQAVRAAGPNALIVRTSWL 150

Query: 179 Y--GSGDKFLRYYGHMWRHVFRKLAVYKKGEE------TIKQPVYVGDVAAAIVAACKDP 230
           Y  G G  F+R           +LA   +GEE       I  P Y  D+A  I A  +  
Sbjct: 151 YGGGGGRNFVR--------TMLRLA--GRGEELRVVDDQIGSPTYAKDLARVIAALLQRL 200

Query: 231 DAAGKIYQAVG 241
             A  +Y    
Sbjct: 201 ARARGVYHLAN 211

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 58/259 (22%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLR----LCGDLGQVLFQPYHP- 75
           V G  G++G ++   L +          G   +VR  DLR    L  D  ++    Y   
Sbjct: 2   VTGGGGFLGRHIVRLLLR---------EGELQEVRVFDLRFSPELLEDFSKLQVITYIEG 52

Query: 76  --RNDDEIRKAIKYSNVVINL--IGREFATKNF-TIADANVEIPARLARLSKEMGVEKFI 130
              +  ++R+A++ S+VVI+   I   F      TI   NV+    +     + GV   +
Sbjct: 53  DVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLV 112

Query: 131 HISA-------------LNADPNPPTYYISGGSQFYRTKYQGEKEVLRE----------- 166
           + S+             +N D   P Y  +    +  +K   EK VL+            
Sbjct: 113 YTSSMEVVGPNSYGQPIVNGDETTP-YESTHQDPYPESKALAEKLVLKANGSTLKNGGRL 171

Query: 167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ-PVYVGDVAAAIVA 225
           +  A   RP+ ++G GD FL  +  + R +   LA ++ G++ +    VYVG+VA A + 
Sbjct: 172 YTCA--LRPAGIFGEGDPFL--FPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWAHIL 227

Query: 226 A-------CKDPDAAGKIY 237
           A        K    AG+ Y
Sbjct: 228 AARALQDPKKASSIAGQFY 246

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 60/235 (25%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V G +G++GS+L  +L ++G ++++       D  D                        
Sbjct: 3   VTGGAGFIGSHLVRRLLERGHEVVV------IDRLD------------------------ 32

Query: 83  KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS----- 133
                  VV++L                 + NV     L   +++ GV++F++ S     
Sbjct: 33  -------VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVY 85

Query: 134 ALNADPNPPTYYISGGSQFY-RTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLR 187
                              Y  +K   E  +LR + E+      I R +++YG G +   
Sbjct: 86  GSPEGLPEEEETPPRPLSPYGVSKLAAEH-LLRSYGESYGLPVVILRLANVYGPGQRPRL 144

Query: 188 YYGHMWRHVFRKLAVYKK-----GEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
               +     R+    K      G    +  ++V DV  AI+ A ++P   G +Y
Sbjct: 145 D--GVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 38/160 (23%), Positives = 54/160 (33%), Gaps = 49/160 (30%)

Query: 109 ANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQ--------------FY- 153
            N   P  LA      G    IHIS         T Y+  G++               Y 
Sbjct: 75  VNALGPGNLAEACAARGA-PLIHIS---------TDYVFDGAKGGPYREDDPTGPLNVYG 124

Query: 154 RTKYQGEKEVLREFPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIK- 211
           RTK  GE+ VL   P   I R + +YG     F++           +LA      + ++ 
Sbjct: 125 RTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK--------TMLRLA---AERDELRV 173

Query: 212 ------QPVYVGDVAAAIVAA----CKDPDAAGKIYQAVG 241
                  P    D+A A++A      + P  AG  Y   G
Sbjct: 174 VDDQLGSPTSARDLADALLALIRKRLRGPALAG-TYHLAG 212

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 35/230 (15%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV------LFQPYHPR 76
           V GA+GY+G  L  +L ++G Q+    R        L       +V      L  P    
Sbjct: 3   VTGATGYVGGRLVPRLLQEGHQVRALVR----SPEKLADRPWSERVTVVRGDLEDP---- 54

Query: 77  NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
             + +R A++  +    L+    +  +F  AD         AR ++  GV++ I++  L 
Sbjct: 55  --ESLRAALEGIDTAYYLVHSMGSGGDFEEADR--RAARNFARAARAAGVKRIIYLGGLI 110

Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLRE--FPEATIFRPSDMYGSGDKFLRYYGHMWR 194
                        S   R++ +   E+LR    P  T  R + + GSG         M R
Sbjct: 111 PKGEEL-------SPHLRSRAEVG-EILRAGGVP-VTELRAAVIIGSGSASFE----MVR 157

Query: 195 HVFRKLAVY--KKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
           ++  +L V    +   T  QP+ + DV   +VAA   P  AG+ ++  GP
Sbjct: 158 YLVERLPVMITPRWVNTPCQPIAIRDVLEYLVAALDRPATAGETFEIGGP 207

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 54/298 (18%), Positives = 104/298 (34%), Gaps = 48/298 (16%)

Query: 25  GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-------------GDLGQVLFQ 71
           G +G++G +L  +L + G ++++  R         R+              GDL Q    
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ---- 60

Query: 72  PYHPR---NDDEIRKAIKYSNVVINLIGR-EFATKNFTIADANVEIPARLARLSKEMGVE 127
              P    +    R+     + VI+     +F   N      N++    +  L+  + ++
Sbjct: 61  ---PNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 128 KFIHIS----------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFR 174
           +F ++S           +      P         + ++K + E+ ++R        T++R
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNP--YEQSKAEAEQ-LVRAAATQIPLTVYR 174

Query: 175 PSDMYG--SGDKFLRYYG--HMWRHVFRKLAVYKK--GEETIKQP-VYVGDVAAAIVAAC 227
           PS + G     +  +  G   +   +  KL  +    G +  +   V V  VA AIV   
Sbjct: 175 PSIVVGDSKTGRIEKIDGLYELLN-LLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN 285
           K P+A G+I+    P    L E+ D F                     P    +  +N
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEPNASLPNALRRSLLN 291

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 63/290 (21%), Positives = 101/290 (34%), Gaps = 73/290 (25%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-----N 77
           V GA+G +G+ +   L  + + ++         VR+                 R     +
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVAL-------VRNPE---KAKAFAADGVEVRQGDYDD 52

Query: 78  DDEIRKAIK-YSNVVI----NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
            + + +A +    +++    +L  R    KNF I  A            K+ GV+  +++
Sbjct: 53  PETLERAFEGVDRLLLISPSDLEDRIQQHKNF-IDAA------------KQAGVKHIVYL 99

Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
           SA  AD + P           R     EK +       TI RP   +   D  L +   +
Sbjct: 100 SASGADEDSP-------FLLARDHGATEKYLEASGIPYTILRPG-WFM--DNLLEFLPSI 149

Query: 193 WRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY------ 245
                    A    G+  +   V   D+A A  AA  +P   GK+Y   GP+        
Sbjct: 150 LEEGTIYGPA----GDGKVA-FVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELA 204

Query: 246 -LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG 294
            +LSE L         G+P        +RY PV P +     L  G P G
Sbjct: 205 AILSEAL---------GKP--------VRYVPVSPDEAARELLAAGLPEG 237

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 40/208 (19%), Positives = 69/208 (33%), Gaps = 74/208 (35%)

Query: 25  GASGYMGSYLCNKL-----------------GKQGSQIIIP---YRGNFYDVRDLR---- 60
           GA+G++G  L  KL                 G+   + +       G F  ++ L     
Sbjct: 3   GATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERIIP 62

Query: 61  LCGDLGQVLFQPYHPR---NDDEIRKAIKYSNVVINLIGREFATKNF-----TIADANVE 112
           + GDL +       P    +D++ ++  +  +V+I+      AT NF      +   NV 
Sbjct: 63  VAGDLSE-------PNLGLSDEDFQELAEEVDVIIHNA----ATVNFVEPYSDLRATNVL 111

Query: 113 IPARLARLSKEMGVEKFIHIS----------------------ALNADPNPPTYYISGGS 150
               + RL+K+M    F H+S                              P  Y     
Sbjct: 112 GTREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYT---- 167

Query: 151 QFYRTKYQGEKEVLREFPE--ATIFRPS 176
              ++K+  E+ V          I+RPS
Sbjct: 168 ---QSKWLAEQLVREAAGGLPVVIYRPS 192

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 36/159 (22%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + G +G +G  L  +L K G Q+ I  R      R  +   +L        +    + + 
Sbjct: 3   ITGGTGLIGRALTARLRKGGHQVTILTR------RPPKASQNL------HPNVTLWEGLA 50

Query: 83  KAIKYS-NVVINLIGREFATKNFT------IADANVEIPARLARLSKEMGVEKFIHISAL 135
            A+    + VINL G   A + +T      I  + +    +L  L           I+A 
Sbjct: 51  DALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVEL-----------IAAS 99

Query: 136 NADPNPPTYYISGGS-QFYRTKYQGEKEVLREFPEATIF 173
                 P   IS  +  +Y     G++ V  E P    F
Sbjct: 100 ET---KPKVLISASAVGYYGH--SGDRVVTEESPPGDDF 133

Length = 297

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 52/250 (20%), Positives = 94/250 (37%), Gaps = 55/250 (22%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP------- 75
           V G SG+ G  L  +L ++G   +       +D+          + L    HP       
Sbjct: 4   VTGGSGFFGERLVKQLLERGGTYVR-----SFDIAPPG------EALSAWQHPNIEFLKG 52

Query: 76  --RNDDEIRKAIKYSNVVINL--IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
              + +++ +A+  ++ V +   I      ++    + NV     +    +  GV+KF++
Sbjct: 53  DITDRNDVEQALSGADCVFHTAAIVPLAGPRDL-YWEVNVGGTQNVLDACQRCGVQKFVY 111

Query: 132 ISAL----------NAD---PNPPTYYISGGSQFY-RTKYQGEKEVL----REFPEATIF 173
            S+           N D   P PP       S  Y  TK   E  VL    R+       
Sbjct: 112 TSSSSVIFGGQNIHNGDETLPYPPLD-----SDMYAETKAIAEIIVLEANGRDDLLTCAL 166

Query: 174 RPSDMYGSGDKFLRYYGHMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVAAC---- 227
           RP+ ++G GD+ L     ++    + L   V+ +G   +    YV ++A A + A     
Sbjct: 167 RPAGIFGPGDQGL--VPILFEWAEKGLVKFVFGRGNNLV-DFTYVHNLAHAHILAAAALV 223

Query: 228 KDPDAAGKIY 237
           K    +G+ Y
Sbjct: 224 KGKTISGQTY 233

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 58/304 (19%), Positives = 98/304 (32%), Gaps = 98/304 (32%)

Query: 22  TVF--GASGYMGSYLCNKL--------------GKQGSQI-------IIPYRGNFYDVRD 58
           TV   GA+G++G+YL  +L               K            +  Y  N +D  +
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 59  LR----LCGDLGQVLF----QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF-----T 105
           L     + GDL +         Y      E+ + +   +V+I+  G   A  N+      
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDY-----QELAEEV---DVIIH-NG---ANVNWVYPYEE 108

Query: 106 IADANVEIPARLARLSKEMGVEKFIHISALNA-------------DPNPPTYYISGGSQF 152
           +  ANV     L +L+    ++    +S L+                +         + +
Sbjct: 109 LKPANVLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGY 168

Query: 153 YRTKYQGEKEVLREF----PEATIFRPSDMYG--------SGDKFLR---------YYGH 191
            ++K+  EK +LRE         I RP +++G        + D F R          Y  
Sbjct: 169 IQSKWVAEK-LLREAANRGLPVAIIRPGNIFGDSETGIGNTDDFFWRLLKGCLQLGIYPI 227

Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
               +                   V  VA AIV    +      IY  + P    L++LL
Sbjct: 228 SGAPLDL---------------SPVDWVARAIVKLALNESNEFSIYHLLNPPLISLNDLL 272

Query: 252 DWFH 255
           D   
Sbjct: 273 DALE 276

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	303
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
KOG2865|consensus	391		100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
KOG1502|consensus	327		100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
KOG0747|consensus	331		100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1429|consensus	350		100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
KOG1430|consensus	361		100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.98
KOG1371|consensus	343		99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PRK05865	854	hypothetical protein; Provisional	99.97
PLN02778	298	3,5-epimerase/4-reductase	99.97
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.96
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.96
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.96
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.95
PLN02503	605	fatty acyl-CoA reductase 2	99.95
PRK12320	699	hypothetical protein; Provisional	99.95
PLN03209	576	translocon at the inner envelope of chloroplast su	99.94
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.94
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.94
KOG1431|consensus	315		99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.93
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.93
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.93
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.91
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.91
PRK07806	248	short chain dehydrogenase; Provisional	99.91
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.9
PRK09135	249	pteridine reductase; Provisional	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.89
PRK07074	257	short chain dehydrogenase; Provisional	99.89
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.89
PRK07067	257	sorbitol dehydrogenase; Provisional	99.89
PRK07774	250	short chain dehydrogenase; Provisional	99.89
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK06914	280	short chain dehydrogenase; Provisional	99.88
PRK12746	254	short chain dehydrogenase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06180	277	short chain dehydrogenase; Provisional	99.87
COG2910	211	Putative NADH-flavin reductase [General function p	99.87
PLN02253	280	xanthoxin dehydrogenase	99.87
PRK06138	252	short chain dehydrogenase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK05876	275	short chain dehydrogenase; Provisional	99.87
PRK06194	287	hypothetical protein; Provisional	99.87
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
PRK07775	274	short chain dehydrogenase; Provisional	99.86
PRK07060	245	short chain dehydrogenase; Provisional	99.86
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.86
PRK06128	300	oxidoreductase; Provisional	99.86
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.86
PRK09186	256	flagellin modification protein A; Provisional	99.86
PRK06182	273	short chain dehydrogenase; Validated	99.85
PRK05717	255	oxidoreductase; Validated	99.85
PRK09134	258	short chain dehydrogenase; Provisional	99.85
PRK07890	258	short chain dehydrogenase; Provisional	99.85
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.85
PRK07856	252	short chain dehydrogenase; Provisional	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK12939	250	short chain dehydrogenase; Provisional	99.85
PRK08628	258	short chain dehydrogenase; Provisional	99.84
PRK06523	260	short chain dehydrogenase; Provisional	99.84
PRK06701	290	short chain dehydrogenase; Provisional	99.84
PRK07577	234	short chain dehydrogenase; Provisional	99.84
PRK07814	263	short chain dehydrogenase; Provisional	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.84
PRK06179	270	short chain dehydrogenase; Provisional	99.84
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.84
PRK10538	248	malonic semialdehyde reductase; Provisional	99.84
PRK06841	255	short chain dehydrogenase; Provisional	99.84
PRK06181	263	short chain dehydrogenase; Provisional	99.83
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.83
PRK12937	245	short chain dehydrogenase; Provisional	99.83
PRK07478	254	short chain dehydrogenase; Provisional	99.83
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
KOG1221|consensus	467		99.83
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.83
PRK06123	248	short chain dehydrogenase; Provisional	99.83
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK06398	258	aldose dehydrogenase; Validated	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07041	230	short chain dehydrogenase; Provisional	99.83
PRK07825	273	short chain dehydrogenase; Provisional	99.83
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07024	257	short chain dehydrogenase; Provisional	99.83
PRK09291	257	short chain dehydrogenase; Provisional	99.83
PRK06500	249	short chain dehydrogenase; Provisional	99.82
PRK12743	256	oxidoreductase; Provisional	99.82
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK09242	257	tropinone reductase; Provisional	99.82
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.82
PRK07035	252	short chain dehydrogenase; Provisional	99.82
PRK12742	237	oxidoreductase; Provisional	99.82
PRK07985	294	oxidoreductase; Provisional	99.82
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.82
PRK05650	270	short chain dehydrogenase; Provisional	99.82
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.82
PRK06114	254	short chain dehydrogenase; Provisional	99.82
PRK07454	241	short chain dehydrogenase; Provisional	99.82
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.81
PRK12747	252	short chain dehydrogenase; Provisional	99.81
PRK07063	260	short chain dehydrogenase; Provisional	99.81
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK05993	277	short chain dehydrogenase; Provisional	99.81
PRK08643	256	acetoin reductase; Validated	99.81
PRK06949	258	short chain dehydrogenase; Provisional	99.81
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.81
PRK08265	261	short chain dehydrogenase; Provisional	99.81
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.81
PRK06196	315	oxidoreductase; Provisional	99.81
PRK08017	256	oxidoreductase; Provisional	99.81
PRK05867	253	short chain dehydrogenase; Provisional	99.81
PRK08264	238	short chain dehydrogenase; Validated	99.81
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
PRK08339	263	short chain dehydrogenase; Provisional	99.8
PRK12744	257	short chain dehydrogenase; Provisional	99.8
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.8
PRK06172	253	short chain dehydrogenase; Provisional	99.8
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.8
PRK08226	263	short chain dehydrogenase; Provisional	99.8
PRK06057	255	short chain dehydrogenase; Provisional	99.79
PRK07576	264	short chain dehydrogenase; Provisional	99.79
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.79
PRK08267	260	short chain dehydrogenase; Provisional	99.79
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.79
PRK06198	260	short chain dehydrogenase; Provisional	99.79
PRK05866	293	short chain dehydrogenase; Provisional	99.79
PRK07102	243	short chain dehydrogenase; Provisional	99.79
PRK08589	272	short chain dehydrogenase; Validated	99.79
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.78
PRK07904	253	short chain dehydrogenase; Provisional	99.78
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.78
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.78
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.78
KOG1203|consensus	411		99.78
PRK06101	240	short chain dehydrogenase; Provisional	99.78
PRK07109	334	short chain dehydrogenase; Provisional	99.78
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.78
PRK08251	248	short chain dehydrogenase; Provisional	99.78
PRK07069	251	short chain dehydrogenase; Validated	99.77
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.77
PRK06197	306	short chain dehydrogenase; Provisional	99.77
PRK07677	252	short chain dehydrogenase; Provisional	99.77
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.77
PRK09072	263	short chain dehydrogenase; Provisional	99.77
PRK05872	296	short chain dehydrogenase; Provisional	99.77
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.76
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.76
PRK05693	274	short chain dehydrogenase; Provisional	99.76
PRK06139	330	short chain dehydrogenase; Provisional	99.76
PRK06924	251	short chain dehydrogenase; Provisional	99.76
PRK08278	273	short chain dehydrogenase; Provisional	99.76
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.76
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.76
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.75
KOG4039|consensus	238		99.75
PRK07062	265	short chain dehydrogenase; Provisional	99.75
PRK07023	243	short chain dehydrogenase; Provisional	99.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.74
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.74
PRK06125	259	short chain dehydrogenase; Provisional	99.74
PRK06940	275	short chain dehydrogenase; Provisional	99.73
PRK08703	239	short chain dehydrogenase; Provisional	99.73
KOG1372|consensus	376		99.73
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.73
PRK05884	223	short chain dehydrogenase; Provisional	99.73
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK07832	272	short chain dehydrogenase; Provisional	99.71
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07578	199	short chain dehydrogenase; Provisional	99.71
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.7
KOG2774|consensus	366		99.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK06953	222	short chain dehydrogenase; Provisional	99.7
PRK07201	657	short chain dehydrogenase; Provisional	99.7
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.7
PRK05855	582	short chain dehydrogenase; Validated	99.69
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK05854	313	short chain dehydrogenase; Provisional	99.68
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK08177	225	short chain dehydrogenase; Provisional	99.68
PRK07791	286	short chain dehydrogenase; Provisional	99.68
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.68
PRK12367	245	short chain dehydrogenase; Provisional	99.67
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.67
PRK06484	520	short chain dehydrogenase; Validated	99.66
KOG1205|consensus	282		99.65
KOG4288|consensus	283		99.65
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.64
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.63
KOG3019|consensus	315		99.63
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.62
PRK05599	246	hypothetical protein; Provisional	99.6
KOG1201|consensus	300		99.58
PRK08303	305	short chain dehydrogenase; Provisional	99.58
PLN02780	320	ketoreductase/ oxidoreductase	99.57
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.55
PRK08862	227	short chain dehydrogenase; Provisional	99.53
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.53
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.52
KOG0725|consensus	270		99.52
KOG1200|consensus	256		99.52
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.5
KOG1611|consensus	249		99.5
PLN00015	308	protochlorophyllide reductase	99.48
KOG4169|consensus	261		99.47
KOG1207|consensus	245		99.47
KOG1208|consensus	314		99.42
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.41
COG1028	251	FabG Dehydrogenases with different specificities (	99.38
KOG1209|consensus	289		99.37
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.35
KOG1610|consensus	322		99.35
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.34
KOG1210|consensus	331		99.28
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.18
PRK08309	177	short chain dehydrogenase; Provisional	99.18
PTZ00325	321	malate dehydrogenase; Provisional	99.12
PLN00106	323	malate dehydrogenase	99.06
PRK06720	169	hypothetical protein; Provisional	99.06
KOG1199|consensus	260		99.04
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.99
KOG1014|consensus	312		98.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.95
PRK09620	229	hypothetical protein; Provisional	98.76
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.74
PRK05086	312	malate dehydrogenase; Provisional	98.72
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.71
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.67
KOG1204|consensus	253		98.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.63
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.61
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.51
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.47
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.47
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.4
KOG1478|consensus	341		98.37
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.29
KOG2733|consensus	423		98.29
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.27
PRK14982	340	acyl-ACP reductase; Provisional	98.22
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.22
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.14
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.13
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.07
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.07
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.05
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.04
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.03
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.96
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.94
PRK05442	326	malate dehydrogenase; Provisional	97.92
COG3268	382	Uncharacterized conserved protein [Function unknow	97.92
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.92
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.92
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.92
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.9
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.87
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.78
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.78
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.77
PRK09496	453	trkA potassium transporter peripheral membrane com	97.75
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.75
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.75
PRK06223	307	malate dehydrogenase; Reviewed	97.74
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.71
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.62
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.61
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.6
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.6
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.59
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.58
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.58
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.56
PLN02383	344	aspartate semialdehyde dehydrogenase	97.55
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.54
KOG1494|consensus	345		97.53
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.53
PLN02602	350	lactate dehydrogenase	97.53
PTZ00117	319	malate dehydrogenase; Provisional	97.53
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.51
PRK04148	134	hypothetical protein; Provisional	97.49
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.47
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.42
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.42
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.42
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.41
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.37
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.36
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.35
PRK09496	453	trkA potassium transporter peripheral membrane com	97.34
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.32
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.31
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.29
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.28
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.25
KOG0023|consensus	360		97.23
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.23
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.22
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.21
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.21
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.2
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.2
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.2
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.19
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.19
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.15
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.15
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.14
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.12
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	97.1
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.08
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.08
KOG4022|consensus	236		97.06
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.06
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	97.05
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.03
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.03
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	97.02
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.02
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.02
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.01
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.01
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.01
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	97.0
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.98
PRK08328	231	hypothetical protein; Provisional	96.98
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.97
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.95
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.93
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.91
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.89
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.89
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.87
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.86
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.85
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.84
PRK08655	437	prephenate dehydrogenase; Provisional	96.83
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.81
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.78
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.78
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.77
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.77
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.77
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.76
PRK08223	287	hypothetical protein; Validated	96.74
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.71
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.7
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.68
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.68
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.67
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.67
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.66
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.65
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.65
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.64
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.64
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.64
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.63
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.6
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.6
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.59
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	96.57
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.53
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.52
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.51
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	96.51
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.51
PRK08462	445	biotin carboxylase; Validated	96.5
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.5
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.48
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.46
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.45
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.45
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.45
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.42
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.41
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.41
PRK06849	389	hypothetical protein; Provisional	96.4
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.39
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.38
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.38
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.38
PRK08818	370	prephenate dehydrogenase; Provisional	96.36
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.36
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.35
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.34
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.34
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.33
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.31
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.31
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.31
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.3
PRK07877	722	hypothetical protein; Provisional	96.29
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.29
PRK10669	558	putative cation:proton antiport protein; Provision	96.29
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.29
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.27
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.26
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.23
KOG1202|consensus	2376		96.23
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.2
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	96.19
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.19
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	96.19
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.19
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.19
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.18
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.17
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.17
PRK12480	330	D-lactate dehydrogenase; Provisional	96.16
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.15
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.15
PRK05678	291	succinyl-CoA synthetase subunit alpha; Validated	96.14
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.12
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.11
KOG1198|consensus	347		96.11
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.11
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.11
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	96.1

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.6e-41  Score=274.96  Aligned_cols=269  Identities=17%  Similarity=0.113  Sum_probs=217.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+||||||+||||+|.+.+|++.|++|++++.-.....+.+...    .++++++|+.|.+.+.++|+.  +|+|||+|+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            68999999999999999999999999999988655544443221    168999999999999999986  999999999


Q ss_pred             cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ..    +.+.|..+++.|+.++.+|+++++++++++|||.||..+||.+      |+.|..|.+||+++|++.|+++++.
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~  156 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDA  156 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHH
Confidence            63    3467889999999999999999999999999999999999984      5667789999999999999999885


Q ss_pred             ----CCCEEEEeecceeeCCC---------chhhHHHHHHHh---hhcceeeecCC------CceeeCceeHHHHHHHHH
Q psy4233         167 ----FPEATIFRPSDMYGSGD---------KFLRYYGHMWRH---VFRKLAVYKKG------EETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       167 ----~~~~~ilrp~~~~G~~~---------~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~i~~~Dva~~~~  224 (303)
                          +++++++|-.++-|...         .-..++...+..   +...+.++|+.      ... |||||+.|+|++.+
T Consensus       157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~i-RDYIHV~DLA~aH~  235 (329)
T COG1087         157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCI-RDYIHVDDLADAHV  235 (329)
T ss_pred             HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCee-eeeeehhHHHHHHH
Confidence                79999999999988311         112233322222   55667787743      445 99999999999999


Q ss_pred             HHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         225 AACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       225 ~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      .+++.  .....++||+++|..+|..|+++.+.++.|++.+. +.+++..-| -..+.......+.++|.|.
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDp-a~l~Ad~~kA~~~Lgw~p~  306 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDP-AILVADSSKARQILGWQPT  306 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCC-ceeEeCHHHHHHHhCCCcc
Confidence            98864  22223599999999999999999999999999887 667776555 4555555666777777766

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.7e-40  Score=271.60  Aligned_cols=243  Identities=18%  Similarity=0.160  Sum_probs=213.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC-CcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN-FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN   93 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~   93 (303)
                      |++|||||.||||+++++.++++.  .+|+.++.-. ....+.+....+.++..++++|+.|.+.+.++++.  +|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            689999999999999999999986  4577776632 23334444455567899999999999999999995  999999


Q ss_pred             ccccCc----cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHH
Q psy4233          94 LIGREF----ATKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPN--------PPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e  160 (303)
                      .|+.+.    ...|+.+.++|+.|+.+|++++++...+ ||+++||-.|||+        +|.+|.+|.+||+.||+.++
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            999743    3578899999999999999999998864 9999999999987        26778999999999999999


Q ss_pred             HHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         161 KEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       161 ~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      .+++++    |++++|.|+++-|||.+.+-.+++.++..  .++.+|++|+|.+. +||+|++|-++|+-.++.+... |
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i-RDWl~VeDh~~ai~~Vl~kg~~-G  238 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI-RDWLYVEDHCRAIDLVLTKGKI-G  238 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce-eeeEEeHhHHHHHHHHHhcCcC-C
Confidence            998885    89999999999999999877777776655  88999999999999 9999999999999999987655 9


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++||++++...+..|+++.|++.+|+..+
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999998766

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.9e-39  Score=287.50  Aligned_cols=244  Identities=15%  Similarity=0.079  Sum_probs=196.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hc--CCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LC--GDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      +.+|+|||||||||||++|+++|+++|++|++++|........+.    ..  ....+++++.+|+.|.+.+..+++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            356899999999999999999999999999999986432211111    00  011358899999999999999999999


Q ss_pred             EEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHH
Q psy4233          90 VVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        90 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~  159 (303)
                      +|||+|+...    ...+....++|+.++.+++++|++.++++|||+||..+|+..      ++.+..|.++|+.+|.++
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            9999998632    245567899999999999999999999999999999999853      223456778999999999


Q ss_pred             HHHHHhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         160 EKEVLRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       160 e~~~~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      |.+++.+    +++++++||+.+|||++...    ..+..++.+  .++.+.++++|.+. ++|+|++|+|++++.++..
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~-rd~i~v~D~a~a~~~~~~~  251 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS-RDFCYIENVIQANLLSATT  251 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce-EeeEEHHHHHHHHHHHHhc
Confidence            9987653    79999999999999975321    233344332  45677888888888 8999999999999987754


Q ss_pred             CC--CCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         230 PD--AAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       230 ~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ..  ..+++||+++++.+|+.|+++.+.+.++.
T Consensus       252 ~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        252 NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            32  24679999999999999999999999973

>KOG2865|consensus

Probab=100.00  E-value=4.2e-39  Score=261.20  Aligned_cols=286  Identities=53%  Similarity=0.865  Sum_probs=257.1

Q ss_pred             cccccCCCCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH
Q psy4233           4 VHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK   83 (303)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   83 (303)
                      +.+++|+|+|+|.++-.+.|.|||||+|..++.+|.+.|.+|++--|..+....+++..+++.++-+...|+.|++++++
T Consensus        47 a~~kkGtGGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~  126 (391)
T KOG2865|consen   47 AAMKKGTGGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA  126 (391)
T ss_pred             hhccCCCCCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH
Confidence            45788999999999999999999999999999999999999999999888888888988999999999999999999999


Q ss_pred             HhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233          84 AIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        84 ~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      +++..++|||+.|...+.....+.++|..+++.|++.|+++|++|+|++|+.++--       ...+.|-++|...|..+
T Consensus       127 vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv-------~s~Sr~LrsK~~gE~aV  199 (391)
T KOG2865|consen  127 VVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV-------KSPSRMLRSKAAGEEAV  199 (391)
T ss_pred             HHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc-------cChHHHHHhhhhhHHHH
Confidence            99999999999999877777889999999999999999999999999999988442       55688999999999999


Q ss_pred             HhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         164 LREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       164 ~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                      ++.....+|+||+.+||..+.+++.+..+|+ +.+.+|+++.|....-+++++-|||.+|+.+++.+.+.|++|.+.+++
T Consensus       200 rdafPeAtIirPa~iyG~eDrfln~ya~~~r-k~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~  278 (391)
T KOG2865|consen  200 RDAFPEATIIRPADIYGTEDRFLNYYASFWR-KFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD  278 (391)
T ss_pred             HhhCCcceeechhhhcccchhHHHHHHHHHH-hcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc
Confidence            9999999999999999999999999999998 688999999997776899999999999999999998899999999999


Q ss_pred             ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhhccC--CCCCCCCCCcccccC
Q psy4233         244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF--PGYPMGHLTPERVER  303 (303)
Q Consensus       244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~  303 (303)
                      -+++.|+++++-+....-...     ...| +|.+...+...+++  |..|..|+++|++++
T Consensus       279 ~yql~eLvd~my~~~~~~~ry-----~r~~-mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~  334 (391)
T KOG2865|consen  279 RYQLSELVDIMYDMAREWPRY-----VRLP-MPIFKAMAAARDFMIVPFPPPSPLNRDQIER  334 (391)
T ss_pred             hhhHHHHHHHHHHHHhhcccc-----ccCC-cHHHHHHHhhhheeecCCCCCCCCCHHHhhh
Confidence            999999999999988763321     2356 67777777777765  555666688888875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.8e-38  Score=271.39  Aligned_cols=238  Identities=19%  Similarity=0.190  Sum_probs=192.0

Q ss_pred             EEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCc
Q psy4233          22 TVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREF   99 (303)
Q Consensus        22 lVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~   99 (303)
                      |||||+||||++|+++|+++|  ++|+++++........  .....+..+++++|++|++++.++++++|+|||+|+...
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            699999999999999999999  7999999876543311  111123345999999999999999999999999998643


Q ss_pred             c---ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC----------CCCC--CCCCCCchhHHHHHHHHHHH
Q psy4233         100 A---TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN----------PPTY--YISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus       100 ~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~----------~~~~--~~~~~~~y~~~K~~~e~~~~  164 (303)
                      .   ...+.++++|+.++++|+++|++.+++++||+||.+++..          +|..  +....+.|+.+|.++|+++.
T Consensus        79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~  158 (280)
T PF01073_consen   79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL  158 (280)
T ss_pred             ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence            3   3456799999999999999999999999999999998654          1222  23456789999999999998


Q ss_pred             hh-C--------CCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC-----
Q psy4233         165 RE-F--------PEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD-----  229 (303)
Q Consensus       165 ~~-~--------~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~-----  229 (303)
                      +. +        +..++|||+.+|||++.. ...+....+ .+...+..+++... .+++|++|+|.+++.+.+.     
T Consensus       159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~-~g~~~~~~g~~~~~-~~~vyV~NvA~ahvlA~~~L~~~~  236 (280)
T PF01073_consen  159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR-SGLFLFQIGDGNNL-FDFVYVENVAHAHVLAAQALLEPG  236 (280)
T ss_pred             hhcccccccccceeEEEEeccEEeCcccccccchhhHHHH-hcccceeecCCCce-ECcEeHHHHHHHHHHHHHHhcccc
Confidence            75 3        689999999999998753 333334433 34355667776666 8999999999999887642     


Q ss_pred             --CCCCCcEEEEeCCcccC-HHHHHHHHHHHhcCCCC
Q psy4233         230 --PDAAGKIYQAVGPKRYL-LSELLDWFHVVMKKGEP  263 (303)
Q Consensus       230 --~~~~g~~~~i~~~~~~s-~~e~~~~i~~~~g~~~~  263 (303)
                        ....|+.|++++++++. +.|+...+.+.+|.+.+
T Consensus       237 ~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~  273 (280)
T PF01073_consen  237 KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP  273 (280)
T ss_pred             ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence              34589999999999998 99999999999999866

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.5e-37  Score=278.54  Aligned_cols=266  Identities=18%  Similarity=0.135  Sum_probs=199.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      .|||||||||||||++|+++|+++|++|++++|......+........++++++.+|+.+..     +.++|+|||+|+.
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~~~D~ViHlAa~  194 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LLEVDQIYHLACP  194 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----ccCCCEEEECcee
Confidence            57999999999999999999999999999999854322221111111246889999987653     4679999999985


Q ss_pred             Cc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CC-----CCCCCCCchhHHHHHHHHH
Q psy4233          98 EF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PT-----YYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        98 ~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~-----~~~~~~~~y~~~K~~~e~~  162 (303)
                      ..    ...+...++.|+.++.+|+++|++.++ ++|++||..+|+..      |+     .|..+.+.|+.+|..+|++
T Consensus       195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~  273 (436)
T PLN02166        195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  273 (436)
T ss_pred             ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence            32    235667889999999999999999986 89999999999853      22     2455677899999999998


Q ss_pred             HHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         163 VLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       163 ~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      ++.+    +++++++||+++|||+...  ...+..++..  .++.+.+++++.+. ++|+|++|+|++++.+++.+ . +
T Consensus       274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~-rdfi~V~Dva~ai~~~~~~~-~-~  350 (436)
T PLN02166        274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQT-RSFQYVSDLVDGLVALMEGE-H-V  350 (436)
T ss_pred             HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeE-EeeEEHHHHHHHHHHHHhcC-C-C
Confidence            8764    7999999999999997431  1223333322  45677788888887 89999999999999998753 3 4


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      .+||+++++.+|+.|+++.+++.+|.+..+ +.+.....+ .........+.+.++|.|-
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~-~~~~~d~~Ka~~~LGw~P~  409 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDP-HKRKPDISKAKELLNWEPK  409 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCc-cccccCHHHHHHHcCCCCC
Confidence            599999999999999999999999987654 333322222 1222233345566677665

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=8.3e-37  Score=272.22  Aligned_cols=266  Identities=15%  Similarity=0.103  Sum_probs=203.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ..|+|||||||||||++++++|+++||+|++++|.........     ...++++.+|+.|.+.+..++.++|+|||+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----MFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----cccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            5789999999999999999999999999999998643211110     11367899999999999998899999999997


Q ss_pred             cCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC----------C--CCCCCCCchhHHHHHH
Q psy4233          97 REF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP----------T--YYISGGSQFYRTKYQG  159 (303)
Q Consensus        97 ~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~----------~--~~~~~~~~y~~~K~~~  159 (303)
                      ...     ...+....+.|+.++.+|+++|++.++++|||+||..+|+...          +  .|..|.++|+.+|..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~  174 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT  174 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence            532     1234456778999999999999999999999999999987521          1  1556788999999999


Q ss_pred             HHHHHh----hCCCEEEEeecceeeCCCch-------h-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         160 EKEVLR----EFPEATIFRPSDMYGSGDKF-------L-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       160 e~~~~~----~~~~~~ilrp~~~~G~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      |+++..    ++++++++||+++|||+..+       . ..+..++. ....+++++++.+. ++|+|++|++++++.++
T Consensus       175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~g~~~-r~~i~v~D~a~ai~~~~  252 (370)
T PLN02695        175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALT-STDEFEMWGDGKQT-RSFTFIDECVEGVLRLT  252 (370)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHc-CCCCeEEeCCCCeE-EeEEeHHHHHHHHHHHH
Confidence            998766    48999999999999996532       1 12222222 34678888998888 89999999999999988


Q ss_pred             cCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      +++ . +++||+++++.+|+.|+++.+++.+|.+.++ +.+.....+  ........+.+.++|.|.
T Consensus       253 ~~~-~-~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~--~~~~d~sk~~~~lgw~p~  315 (370)
T PLN02695        253 KSD-F-REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVR--GRNSDNTLIKEKLGWAPT  315 (370)
T ss_pred             hcc-C-CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCcc--ccccCHHHHHHhcCCCCC
Confidence            754 2 5699999999999999999999999976554 111111111  222333356666777665

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=7.8e-37  Score=277.43  Aligned_cols=251  Identities=17%  Similarity=0.164  Sum_probs=192.7

Q ss_pred             CCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc------c----------cchhc--CCCCceEEEe
Q psy4233          11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV------R----------DLRLC--GDLGQVLFQP   72 (303)
Q Consensus        11 ~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~----------~~~~~--~~~~~~~~~~   72 (303)
                      +.....++|+|||||||||||++|+++|+++|++|++++|......      +          .+...  ....+++++.
T Consensus        40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            3344467899999999999999999999999999999875321110      0          00000  0013589999


Q ss_pred             cCCCCHHHHHHHhcc--cCEEEEccccCcc----cc---chhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCCCC
Q psy4233          73 YHPRNDDEIRKAIKY--SNVVINLIGREFA----TK---NFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPNPP  142 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~--~D~vi~~a~~~~~----~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~  142 (303)
                      +|+.|.+.+.+++++  +|+|||+|+....    ..   ....+++|+.++.+++++|++.+++ ++|++||..+|+...
T Consensus       120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~  199 (442)
T PLN02572        120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN  199 (442)
T ss_pred             CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence            999999999999985  8999999975221    11   2345689999999999999999985 999999999998531


Q ss_pred             ----------------C---CCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--------------
Q psy4233         143 ----------------T---YYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--------------  185 (303)
Q Consensus       143 ----------------~---~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--------------  185 (303)
                                      +   .|..|.++|+.+|.++|.+++.+    +++++++||+++|||++..              
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence                            1   24567789999999999988664    8999999999999997532              


Q ss_pred             ---hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC--cEEEEeCCcccCHHHHHHHHHHH-
Q psy4233         186 ---LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG--KIYQAVGPKRYLLSELLDWFHVV-  257 (303)
Q Consensus       186 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g--~~~~i~~~~~~s~~e~~~~i~~~-  257 (303)
                         ...+..++.+  .++.+.++|+|.+. ++|+|++|+|++++.++++....|  ++||+++ +.+|+.|+++.+++. 
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~-Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~  357 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQT-RGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAG  357 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEE-ECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHH
Confidence               1233333332  45567788999988 899999999999999998643334  5899975 679999999999999 


Q ss_pred             --hcCCCC
Q psy4233         258 --MKKGEP  263 (303)
Q Consensus       258 --~g~~~~  263 (303)
                        +|.+..
T Consensus       358 ~~~g~~~~  365 (442)
T PLN02572        358 EKLGLDVE  365 (442)
T ss_pred             HhhCCCCC
Confidence              886654

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=9.6e-37  Score=274.06  Aligned_cols=245  Identities=20%  Similarity=0.252  Sum_probs=190.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ...++|+|||||||||||++|+++|+++ |++|++++|+...........  ...++++++.+|+.|.+.+.++++++|+
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence            3456789999999999999999999998 599999998643221111000  1124699999999999999999999999


Q ss_pred             EEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC--------------
Q psy4233          91 VINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI--------------  146 (303)
Q Consensus        91 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~--------------  146 (303)
                      |||+|+....    ..+......|+.++.+++++|++.+ ++|||+||..+|+..      ++.|.              
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence            9999986322    2344566789999999999999887 799999999999752      12221              


Q ss_pred             --------CCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch-----------hhHHHHHHHh--hhccee
Q psy4233         147 --------SGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-----------LRYYGHMWRH--VFRKLA  201 (303)
Q Consensus       147 --------~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-----------~~~~~~~~~~--~~~~~~  201 (303)
                              .+.+.|+.+|..+|+++..+    +++++++||+++|||+...           ...+..++..  .++.+.
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK  248 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence                    12357999999999998763    7999999999999997431           1122222222  456677


Q ss_pred             eecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeCC-cccCHHHHHHHHHHHhcC
Q psy4233         202 VYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGP-KRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       202 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~  260 (303)
                      +++++.+. ++|+|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.
T Consensus       249 ~~g~g~~~-r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        249 LVDGGQSQ-RTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             EECCCCce-ECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            78887777 899999999999999998753 35779999987 589999999999999985

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=3.9e-36  Score=267.43  Aligned_cols=242  Identities=16%  Similarity=0.163  Sum_probs=191.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--cchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~   93 (303)
                      |++|||||||||||++++++|+++|++++++.++......  .+.......+++++.+|+.|.+++.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4799999999999999999999999876654443222111  111101113588999999999999999985  899999


Q ss_pred             ccccCcc----ccchhhhhhhcchHHHHHHHHHh---------cCCceEEEEecCccCCC--------CCCCCCCCCCch
Q psy4233          94 LIGREFA----TKNFTIADANVEIPARLARLSKE---------MGVEKFIHISALNADPN--------PPTYYISGGSQF  152 (303)
Q Consensus        94 ~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y  152 (303)
                      +|+....    ..+..+.++|+.++.+++++|++         .+++++|++||.++|+.        +|+.+..|.+.|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            9986432    24567899999999999999986         35679999999999874        234466678899


Q ss_pred             hHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       153 ~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +.+|..+|.+++.+    +++++++||+.+|||+......+..++..  .+..++++++|.+. ++|+|++|+|++++.+
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~i~v~D~a~a~~~~  239 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI-RDWLYVEDHARALYCV  239 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee-eCcCcHHHHHHHHHHH
Confidence            99999999988753    78999999999999986433333333332  45567888888888 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      ++.+. .+++||+++++.+|+.|+++.+++.+|+.
T Consensus       240 ~~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  273 (355)
T PRK10217        240 ATTGK-VGETYNIGGHNERKNLDVVETICELLEEL  273 (355)
T ss_pred             HhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence            98643 46799999999999999999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=4e-36  Score=272.08  Aligned_cols=267  Identities=16%  Similarity=0.124  Sum_probs=198.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ..|||||||||||||++|+++|+++|++|++++|......+........++++++.+|+.+..     +.++|+|||+|+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa  192 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLAC  192 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeee
Confidence            368999999999999999999999999999998753322221111111246889999987653     457999999998


Q ss_pred             cCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC------C-----CCCCCCCchhHHHHHHHH
Q psy4233          97 REF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP------T-----YYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        97 ~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~------~-----~~~~~~~~y~~~K~~~e~  161 (303)
                      ...    ...+...+++|+.++.+|+++|++.++ ++|++||..+|+...      +     .|..+.+.|+.+|..+|+
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            532    235678889999999999999999996 999999999997532      1     133446789999999999


Q ss_pred             HHHh----hCCCEEEEeecceeeCCCc--hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         162 EVLR----EFPEATIFRPSDMYGSGDK--FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       162 ~~~~----~~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      ++..    .+++++++||+++|||+..  ....+..++.+  .++.+.++++|.+. ++|+|++|+|++++.+++++ . 
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~-rdfi~V~Dva~ai~~a~e~~-~-  348 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT-RSFQFVSDLVEGLMRLMEGE-H-  348 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE-EeEEeHHHHHHHHHHHHhcC-C-
Confidence            8875    3799999999999999742  11223333332  45677888888888 89999999999999998754 3 


Q ss_pred             CcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         234 GKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       234 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      +..||+++++.+|+.|+++.+.+.+|.+..+ +.+.....+ .........+.+.++|.|.
T Consensus       349 ~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~-~~~~~d~sKa~~~LGw~P~  408 (442)
T PLN02206        349 VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDP-HKRKPDITKAKELLGWEPK  408 (442)
T ss_pred             CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCc-cccccCHHHHHHHcCCCCC
Confidence            4499999999999999999999999876553 222221112 2223333455566676665

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=5.8e-36  Score=265.43  Aligned_cols=239  Identities=15%  Similarity=0.151  Sum_probs=189.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCC-CHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-NDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~D~vi~~a   95 (303)
                      ||+|||||||||||++|+++|+++ |++|++++|+.......   . ..++++++.+|+. +.+.+.++++++|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~-~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---V-NHPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---c-cCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            479999999999999999999986 69999999864321111   1 1245999999997 7788888889999999999


Q ss_pred             ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCC-CC------CCCCchhHHHHH
Q psy4233          96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTY-YI------SGGSQFYRTKYQ  158 (303)
Q Consensus        96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~-~~------~~~~~y~~~K~~  158 (303)
                      +...    ...+...+++|+.++.+++++|++.+ +++||+||..+|+..      ++. +.      .|.++|+.+|..
T Consensus        77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~  155 (347)
T PRK11908         77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQL  155 (347)
T ss_pred             ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHH
Confidence            8532    34567788999999999999999988 699999999998752      121 11      345689999999


Q ss_pred             HHHHHHhh----CCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         159 GEKEVLRE----FPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       159 ~e~~~~~~----~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      +|++++.+    +++++++||+.+|||+...        ...+..++..  .++.+.+.++|.+. ++|+|++|+|++++
T Consensus       156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~-r~~i~v~D~a~a~~  234 (347)
T PRK11908        156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQK-RAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCcee-eccccHHHHHHHHH
Confidence            99998763    7999999999999997421        1233333332  45566777778877 89999999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCC-cccCHHHHHHHHHHHhcCCC
Q psy4233         225 AACKDPD--AAGKIYQAVGP-KRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~  262 (303)
                      .+++++.  ..+++||++++ ..+|+.|+++.|.+.+|..+
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            9998753  45789999987 47999999999999999643

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=4.4e-36  Score=262.78  Aligned_cols=227  Identities=16%  Similarity=0.142  Sum_probs=182.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+|+|||||||+|++++++|+++||+|++++|+.... ..+.    ..+++++.+|+.|++++.++++++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLK----EWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHh----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            5899999999999999999999999999999975322 1111    1369999999999999999999999999998753


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM  178 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~  178 (303)
                       ...+..+.++|+.++.+++++|++++++|||++||.++..       .+..+|..+|.++|+++++++++++++||+.+
T Consensus        76 -~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~  147 (317)
T CHL00194         76 -PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------YPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGF  147 (317)
T ss_pred             -CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------cCCChHHHHHHHHHHHHHHcCCCeEEEeecHH
Confidence             2334567888999999999999999999999999976543       23367899999999999999999999999988


Q ss_pred             eeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       179 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      |+....  ......+  ....+.+ +++.+. ++|||++|+|++++.++.++...+++||+++++.+|+.|+++.+++.+
T Consensus       148 ~~~~~~--~~~~~~~--~~~~~~~-~~~~~~-~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~  221 (317)
T CHL00194        148 FQGLIS--QYAIPIL--EKQPIWI-TNESTP-ISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLS  221 (317)
T ss_pred             hhhhhh--hhhhhhc--cCCceEe-cCCCCc-cCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence            853111  0111111  2223333 334445 799999999999999998766678899999999999999999999999


Q ss_pred             cCCCCC
Q psy4233         259 KKGEPD  264 (303)
Q Consensus       259 g~~~~~  264 (303)
                      |++..+
T Consensus       222 g~~~~~  227 (317)
T CHL00194        222 GQKAKI  227 (317)
T ss_pred             CCCCeE
Confidence            998663

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=2.9e-35  Score=255.39  Aligned_cols=220  Identities=19%  Similarity=0.197  Sum_probs=177.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+||||||+||||++++++|+++| +|++++|...                .+.+|+.|.+.+.+++++  +|+|||||+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa   63 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA   63 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence            589999999999999999999999 7999888531                246899999999999884  899999999


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ....    ..+...+.+|+.++.+++++|++.++ ++||+||..+|+..      |+.+..|.++|+.+|.++|++++.+
T Consensus        64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            7432    34566778999999999999999996 89999999998652      4556678899999999999999998


Q ss_pred             CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecC--CCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         167 FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKK--GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                      ..+++++|++++|||+.. +...+...+. .++.++++++  +.+. ..+...+|++.++..++..... +++||+++++
T Consensus       143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~-~~~~~~v~~d~~g~~~-~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~  219 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAK-EREELSVINDQFGAPT-GAELLADCTAHAIRVALNKPEV-AGLYHLVASG  219 (299)
T ss_pred             CCCEEEEecceecCCCCCCHHHHHHHHHh-cCCCeEEeCCCcCCCC-CHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCC
Confidence            889999999999999653 3333333222 4567788877  4444 3456677788888877764333 3499999999


Q ss_pred             ccCHHHHHHHHHHHhc
Q psy4233         244 RYLLSELLDWFHVVMK  259 (303)
Q Consensus       244 ~~s~~e~~~~i~~~~g  259 (303)
                      .+|+.|+++.+.+.++
T Consensus       220 ~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        220 TTTWHDYAALVFEEAR  235 (299)
T ss_pred             CccHHHHHHHHHHHHH
Confidence            9999999999988654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=8e-35  Score=277.11  Aligned_cols=239  Identities=15%  Similarity=0.137  Sum_probs=190.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH-HHHHhcccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE-IRKAIKYSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~D~vi~~   94 (303)
                      .+|+|||||||||||++|+++|+++ |++|++++|.........    ..++++++.+|++|.+. +.++++++|+|||+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~----~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl  389 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL----GHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL  389 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc----CCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence            4789999999999999999999986 799999999653321111    12468999999998665 56788899999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC-------CCCCchhHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI-------SGGSQFYRTKY  157 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~-------~~~~~y~~~K~  157 (303)
                      |+...    ...+...+++|+.++.+++++|++++ +++||+||..+|+..      |+.+.       .+.+.|+.+|.
T Consensus       390 Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        390 VAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             ccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            98643    23455688999999999999999998 799999999999852      22211       23457999999


Q ss_pred             HHHHHHHhh----CCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         158 QGEKEVLRE----FPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .+|++++.+    +++++++||+++|||+...        ...+..++..  .++.+.++++|.+. ++|+|++|+|+++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~-rd~i~v~Dva~a~  547 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK-RCFTDIRDGIEAL  547 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee-eceeeHHHHHHHH
Confidence            999999764    7999999999999997532        1233444333  45567778888888 8999999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCc-ccCHHHHHHHHHHHhcCC
Q psy4233         224 VAACKDPD--AAGKIYQAVGPK-RYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~  261 (303)
                      +.+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus       548 ~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        548 FRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            99998643  347799999986 799999999999999964

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=7.5e-35  Score=278.50  Aligned_cols=245  Identities=15%  Similarity=0.189  Sum_probs=195.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHh--cccCE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI--KYSNV   90 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~   90 (303)
                      .++|+|||||||||||++++++|+++  +++|++++|... .....+......++++++.+|+.|.+.+..++  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            45789999999999999999999998  689999987531 11111111112356999999999999888766  56999


Q ss_pred             EEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC---------CCCCCCCCCchhHHH
Q psy4233          91 VINLIGREFA----TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP---------PTYYISGGSQFYRTK  156 (303)
Q Consensus        91 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~---------~~~~~~~~~~y~~~K  156 (303)
                      |||+|+....    ..+..++++|+.++.+++++|++.+ +++|||+||..+|+..         ++.+..|.++|+.+|
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            9999997432    2345788999999999999999987 8999999999998753         333556788999999


Q ss_pred             HHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         157 YQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+|++++.+    +++++++||+++|||++.....+..++..  .++.+++++++.+. ++|+|++|+|++++.++++.
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~-r~~ihV~Dva~a~~~~l~~~  242 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNV-RSYLYCEDVAEAFEVVLHKG  242 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCce-EeeEEHHHHHHHHHHHHhcC
Confidence            9999998763    79999999999999986433333333222  45678888888887 89999999999999998754


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                       ..+++||+++++.+|+.|+++.+++.+|.+.
T Consensus       243 -~~~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        243 -EVGHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             -CCCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence             3467999999999999999999999999764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-34  Score=256.56  Aligned_cols=242  Identities=15%  Similarity=0.093  Sum_probs=188.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      ++|+||||||+||||+++++.|+++|++|++++|+...............+++++.+|++|.+++.+++++  +|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            46899999999999999999999999999999987654322211111123578899999999999999886  6999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+...    ...+...+++|+.++.+++++++..+ ++++|++||..+|+..       ++.+..|.++|+.+|..+|.+
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  162 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV  162 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence            98532    23456788999999999999999877 7899999999988742       334556788999999999998


Q ss_pred             HHhh-----------CCCEEEEeecceeeCCCch-hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         163 VLRE-----------FPEATIFRPSDMYGSGDKF-LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       163 ~~~~-----------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      ++.+           +++++++||+.+|||++.. ...+..+++.  .+..++ .+++.+. ++|+|++|+|++++.+++
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~~g~~~-rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       163 IASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IRNPDAT-RPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             HHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-ECCCCcc-cceeeHHHHHHHHHHHHH
Confidence            8763           7899999999999997522 2334444443  334444 4566777 899999999999998876


Q ss_pred             CC----CCCCcEEEEeCC--cccCHHHHHHHHHHHhcC
Q psy4233         229 DP----DAAGKIYQAVGP--KRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       229 ~~----~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~  260 (303)
                      ..    ...+++||++++  ++++..|+++.+.+.++.
T Consensus       241 ~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       241 KLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             HHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            31    123569999874  689999999999988764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.6e-34  Score=256.82  Aligned_cols=241  Identities=16%  Similarity=0.170  Sum_probs=189.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      |||||||||||||++++++|+++|++ |+++++... .............+++++.+|+.|.+++.+++++  +|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999975 555555321 1111111111124578899999999999999875  8999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhc---------CCceEEEEecCccCCC----------------CCCCC
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEM---------GVEKFIHISALNADPN----------------PPTYY  145 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~----------------~~~~~  145 (303)
                      |+...    ...+..+.++|+.++.+++++|++.         +++++|++||..+|+.                .|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            98632    2346789999999999999999874         4679999999999874                13445


Q ss_pred             CCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ..|.+.|+.+|..+|.+++.+    +++++++|++.+|||+......+..++..  .+..+++++++.+. ++|+|++|+
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~D~  239 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI-RDWLYVEDH  239 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeE-EeeEEHHHH
Confidence            678899999999999988753    79999999999999986433333333332  34567788888887 899999999


Q ss_pred             HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      |++++.+++++ ..+++||+++++.+|+.|+++.+++.+|+.
T Consensus       240 a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        240 ARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence            99999998864 346799999999999999999999999864

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=2.4e-34  Score=255.63  Aligned_cols=250  Identities=18%  Similarity=0.181  Sum_probs=191.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc---cchh-c-CCCCceEEEecCCCCHHHHHHHhc--
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR---DLRL-C-GDLGQVLFQPYHPRNDDEIRKAIK--   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~--   86 (303)
                      |++++++|+|||||||||++++++|+++|++|++++|.......   .... . ....+++++.+|+.|++.+..+++  
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            46778899999999999999999999999999999875432111   1111 0 012458899999999999999887  


Q ss_pred             ccCEEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233          87 YSNVVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTK  156 (303)
Q Consensus        87 ~~D~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K  156 (303)
                      ++|+|||+|+...    ...+...++.|+.++.++++++++.+++++|++||.++|+.      +|+.|..+.++|+.+|
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  160 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTK  160 (352)
T ss_pred             CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence            5899999998632    23455788999999999999999999999999999988874      2455667788999999


Q ss_pred             HHHHHHHHhh-----CCCEEEEeecceeeCCCc---------hhhHHHHHHHh----hhcceeeec------CCCceeeC
Q psy4233         157 YQGEKEVLRE-----FPEATIFRPSDMYGSGDK---------FLRYYGHMWRH----VFRKLAVYK------KGEETIKQ  212 (303)
Q Consensus       157 ~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~---------~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~  212 (303)
                      ..+|++++.+     +++++++|++.+||+...         ....+..++..    ....+.+++      +|.+. ++
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~  239 (352)
T PLN02240        161 LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGV-RD  239 (352)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEE-Ee
Confidence            9999998753     578899999999986321         11111111111    122455554      45666 89


Q ss_pred             ceeHHHHHHHHHHHhcC----CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         213 PVYVGDVAAAIVAACKD----PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~----~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+|++|+|++++.++.+    +...+++||+++++++|++|+++.+.+.+|++.++
T Consensus       240 ~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~  295 (352)
T PLN02240        240 YIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPL  295 (352)
T ss_pred             eEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCc
Confidence            99999999999988863    23345799999999999999999999999987664

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.4e-34  Score=250.82  Aligned_cols=242  Identities=18%  Similarity=0.193  Sum_probs=191.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      +|+||||||+||++++++|+++|  ++|++++|.... ..+........++++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  789998774221 111111111124688999999999999999987  9999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCC-------CCCCCCCCCCchhHHHHHHHHH
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPN-------PPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~-------~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+....    ..+..++++|+.++.++++++++.+.+ ++|++||..+|+.       .+..+..+.+.|+.+|..+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            986322    345678899999999999999987543 8999999988874       2344556778899999999998


Q ss_pred             HHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE
Q psy4233         163 VLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI  236 (303)
Q Consensus       163 ~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~  236 (303)
                      ++.    .+++++++||+.+|||.......+..++..  .++.+++++++.+. ++|+|++|+|+++..++++. ..+++
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~D~a~~~~~~~~~~-~~~~~  238 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQV-RDWLYVEDHCRAIYLVLEKG-RVGET  238 (317)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceE-EeeEEHHHHHHHHHHHHcCC-CCCce
Confidence            875    379999999999999975433334333332  44567788888777 89999999999999999754 45679


Q ss_pred             EEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         237 YQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       237 ~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ||+++++++++.|+++.+.+.+|.+..
T Consensus       239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~  265 (317)
T TIGR01181       239 YNIGGGNERTNLEVVETILELLGKDED  265 (317)
T ss_pred             EEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence            999999999999999999999997644

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.9e-34  Score=253.55  Aligned_cols=238  Identities=17%  Similarity=0.174  Sum_probs=182.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++|+|||||||||||++++++|+++|++|++++|+....... +. .....++++++.+|+.|.+++.++++++|+|||+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            467999999999999999999999999999999975432111 11 1111235889999999999999999999999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC-ccCCCC---------CCC------CCCCCCchhHHHHH
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL-NADPNP---------PTY------YISGGSQFYRTKYQ  158 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~~---------~~~------~~~~~~~y~~~K~~  158 (303)
                      |+.. ...+...++.|+.++.+++++|++.+++++|++||. .+|+..         |+.      +..+.++|+.+|..
T Consensus        89 A~~~-~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~  167 (342)
T PLN02214         89 ASPV-TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV  167 (342)
T ss_pred             cCCC-CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence            9975 345677889999999999999999999999999996 467532         111      22356789999999


Q ss_pred             HHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         159 GEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       159 ~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      +|++++.+    +++++++||+++|||+...  ...+..++....+..+.++  ... ++|||++|+|++++.+++++..
T Consensus       168 aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~--~~~-~~~i~V~Dva~a~~~al~~~~~  244 (342)
T PLN02214        168 AEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA--NLT-QAYVDVRDVALAHVLVYEAPSA  244 (342)
T ss_pred             HHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC--CCC-cCeeEHHHHHHHHHHHHhCccc
Confidence            99998764    7999999999999997542  1111222221112222233  344 7999999999999999987544


Q ss_pred             CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         233 AGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                       ++.||+++ +.+++.|+++.+.+.++.
T Consensus       245 -~g~yn~~~-~~~~~~el~~~i~~~~~~  270 (342)
T PLN02214        245 -SGRYLLAE-SARHRGEVVEILAKLFPE  270 (342)
T ss_pred             -CCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence             45899977 578999999999999963

>KOG1502|consensus

Probab=100.00  E-value=4.5e-34  Score=241.32  Aligned_cols=240  Identities=20%  Similarity=0.176  Sum_probs=184.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--cch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++++|+|||||||||++|+++||++||.|++++|++.+...  .+. +.+..++.+.+.+|+.|++++..++++||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            57899999999999999999999999999999998765322  222 333445699999999999999999999999999


Q ss_pred             ccccCccccc--h-hhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-----CCCCCC------------CCCch
Q psy4233          94 LIGREFATKN--F-TIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-----PTYYIS------------GGSQF  152 (303)
Q Consensus        94 ~a~~~~~~~~--~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-----~~~~~~------------~~~~y  152 (303)
                      +|.+..+...  + +..+..++|++|++++|++.. |+|+|++||..+-..+     +.....            ....|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            9998544322  3 799999999999999999998 9999999998875422     111111            12469


Q ss_pred             hHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       153 ~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..+|..+|+...++    +++.+.+.|+.|+||....  .......+....+....+   .+....|+|++|||.|.+.+
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHH
Confidence            99999999988775    6999999999999997543  111111111122223322   22224589999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      ++++.+.| .|.+.+.. .++.|+++.+.+.+...
T Consensus       242 ~E~~~a~G-Ryic~~~~-~~~~ei~~~l~~~~P~~  274 (327)
T KOG1502|consen  242 LEKPSAKG-RYICVGEV-VSIKEIADILRELFPDY  274 (327)
T ss_pred             HcCcccCc-eEEEecCc-ccHHHHHHHHHHhCCCC
Confidence            99888876 78776654 56999999999988654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.5e-34  Score=253.64  Aligned_cols=241  Identities=13%  Similarity=0.008  Sum_probs=189.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchh-cC-----CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRL-CG-----DLGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~-~~-----~~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      ++|||||||||||++++++|+++|++|++++|+.... ...+.. ..     ...+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999975421 111110 00     013589999999999999999985  69


Q ss_pred             EEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc---eEEEEecCccCCCC------CCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVE---KFIHISALNADPNP------PTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K  156 (303)
                      +|||+|+....    ..+....++|+.++.+++++|++.+++   ++||+||..+|+..      |+.|..|.++|+.+|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999996322    234566788999999999999998863   89999999999852      455667889999999


Q ss_pred             HHHHHHHHhh----CCCEEEEeecceeeCCCch---hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE----FPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..+|.+++.+    ++++++.|+.++|||+...   ...+...+..  .++ ...++|+|.+. ++|+|++|+|++++.+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-rd~i~V~D~a~a~~~~  239 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAK-RDWGHAKDYVEAMWLM  239 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccc-cCceeHHHHHHHHHHH
Confidence            9999998664    7889999999999986321   1222333322  222 33456888888 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      ++++.  ++.||+++++++|+.|+++.+++.+|++.
T Consensus       240 ~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       240 LQQDK--PDDYVIATGETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             HhcCC--CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence            98643  34899999999999999999999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=9.9e-34  Score=250.35  Aligned_cols=245  Identities=18%  Similarity=0.151  Sum_probs=185.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      |+|+|||||||||++++++|+++|++|++++|............  ....+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            58999999999999999999999999999877533222111100  011347889999999999999887  48999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC-CCCCchhHHHHHHHHHH
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI-SGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~-~~~~~y~~~K~~~e~~~  163 (303)
                      |+....    ..+...++.|+.++.++++++++.+++++|++||.++|+..      |+.|. .|.++|+.+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            986432    23457889999999999999999999999999999988742      33343 56789999999999998


Q ss_pred             Hhh-----CCCEEEEeecceeeCCCc----------hhhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHH
Q psy4233         164 LRE-----FPEATIFRPSDMYGSGDK----------FLRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDV  219 (303)
Q Consensus       164 ~~~-----~~~~~ilrp~~~~G~~~~----------~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dv  219 (303)
                      +.+     +++++++|++.+|||...          ....+..+...   ....+.+++      +|.+. ++|+|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV-RDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE-EeeEEHHHH
Confidence            763     578999999999986311          01112212111   122344444      45566 899999999


Q ss_pred             HHHHHHHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         220 AAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       220 a~~~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |++++.+++.  ....+++||+++++.+|+.|+++.+.+.+|++..+
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  286 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNY  286 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCe
Confidence            9999999874  22335799999999999999999999999987653

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.6e-33  Score=247.77  Aligned_cols=243  Identities=14%  Similarity=0.026  Sum_probs=190.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhc-----CCCCceEEEecCCCCHHHHHHHhcc--
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLC-----GDLGQVLFQPYHPRNDDEIRKAIKY--   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~--   87 (303)
                      .++|+||||||+||||++++++|+++|++|++++|+.... ...+...     ....+++++.+|+.|.+++.+++++  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            3468999999999999999999999999999999865321 1111110     0113589999999999999998885  


Q ss_pred             cCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-----eEEEEecCccCCC-----CCCCCCCCCCchh
Q psy4233          88 SNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVE-----KFIHISALNADPN-----PPTYYISGGSQFY  153 (303)
Q Consensus        88 ~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~Ss~~~~~~-----~~~~~~~~~~~y~  153 (303)
                      +|+|||+|+....    ..+...+++|+.++.++++++++.+++     ++|++||.++|+.     .|+.|..|.+.|+
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            7999999996322    345567789999999999999998875     8999999999986     3455667888999


Q ss_pred             HHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--h-hHHHHHHHh--hhcceee-ecCCCceeeCceeHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--L-RYYGHMWRH--VFRKLAV-YKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       154 ~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~-~~~~~~~~~--~~~~~~~-~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .+|..+|.+++.+    ++.++..|+.++|||+...  . ..+..++..  .+...++ .|++.+. ++|+|++|+|+++
T Consensus       164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-rd~i~v~D~a~a~  242 (340)
T PLN02653        164 VAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDAS-RDWGFAGDYVEAM  242 (340)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcce-ecceeHHHHHHHH
Confidence            9999999998664    6778889999999986432  1 222222221  2333444 4777877 8999999999999


Q ss_pred             HHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       224 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +.+++++.  ++.||+++++++|+.|+++.+++.+|.+
T Consensus       243 ~~~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        243 WLMLQQEK--PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             HHHHhcCC--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            99998643  4589999999999999999999999964

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-33  Score=247.23  Aligned_cols=236  Identities=22%  Similarity=0.228  Sum_probs=191.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc-CEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS-NVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-D~vi~~a~~   97 (303)
                      |+|||||||||||++|+++|+++|++|++++|...+.....      .+++++.+|+.|.+.......+. |+|||+|+.
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~   74 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQ   74 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEcccc
Confidence            35999999999999999999999999999999765443322      35889999999998888888888 999999997


Q ss_pred             Cccc-----cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CC-CCCCCCCchhHHHHHHHHHHH
Q psy4233          98 EFAT-----KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PT-YYISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus        98 ~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~-~~~~~~~~y~~~K~~~e~~~~  164 (303)
                      ....     .+..++++|+.++.+++++|++.+++++||+||.++++..       |+ .|..|.++|+.+|.++|+.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~  154 (314)
T COG0451          75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLR  154 (314)
T ss_pred             CchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence            4322     2345899999999999999999999999998887766532       33 466676789999999999998


Q ss_pred             hh----CCCEEEEeecceeeCCCchh---hHHHHHHHh--hhcc-eeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         165 RE----FPEATIFRPSDMYGSGDKFL---RYYGHMWRH--VFRK-LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       165 ~~----~~~~~ilrp~~~~G~~~~~~---~~~~~~~~~--~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      .+    +++++++||+++|||+....   .....++..  .+.. +...+++... ++++|++|++++++.+++++... 
T Consensus       155 ~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~-  232 (314)
T COG0451         155 AYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQT-RDFVYVDDVADALLLALENPDGG-  232 (314)
T ss_pred             HHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCcee-EeeEeHHHHHHHHHHHHhCCCCc-
Confidence            86    49999999999999986543   233322211  3333 5555566666 89999999999999999976553 


Q ss_pred             cEEEEeCCc-ccCHHHHHHHHHHHhcCCCC
Q psy4233         235 KIYQAVGPK-RYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       235 ~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~  263 (303)
                       .||+++++ ..+..|+++.+.+.+|.+.+
T Consensus       233 -~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         233 -VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             -EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence             99999997 89999999999999998865

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=4.7e-34  Score=239.64  Aligned_cols=215  Identities=27%  Similarity=0.363  Sum_probs=181.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc--CEEEEccccC
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS--NVVINLIGRE   98 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vi~~a~~~   98 (303)
                      |||||||||||++++++|+++|++|+.+.|+..+.......    .+++++.+|+.|.+.+.+++++.  |+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999999986654332221    15999999999999999999875  9999999974


Q ss_pred             c----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh--
Q psy4233          99 F----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE--  166 (303)
Q Consensus        99 ~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~--  166 (303)
                      .    ...+...++.|+.++.++++++++.+++++|++||..+|+..      |+.+..+.++|+.+|...|++++.+  
T Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            2    245667889999999999999999999999999999999875      3334567788999999999999875  


Q ss_pred             --CCCEEEEeecceeeCC---CchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         167 --FPEATIFRPSDMYGSG---DKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       167 --~~~~~ilrp~~~~G~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                        +++++++||+.+|||.   ......+..++..  .++.+.+++++.+. ++|+|++|+|++++.+++++...+++||+
T Consensus       157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~~yNi  235 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQV-RDFIHVDDLAEAIVAALENPKAAGGIYNI  235 (236)
T ss_dssp             HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCE-EEEEEHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred             ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCc-cceEEHHHHHHHHHHHHhCCCCCCCEEEe
Confidence              7999999999999998   3444444545444  55568889999997 89999999999999999988767889998


Q ss_pred             e
Q psy4233         240 V  240 (303)
Q Consensus       240 ~  240 (303)
                      +
T Consensus       236 g  236 (236)
T PF01370_consen  236 G  236 (236)
T ss_dssp             S
T ss_pred             C
Confidence            5

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=1.8e-33  Score=251.80  Aligned_cols=235  Identities=18%  Similarity=0.188  Sum_probs=188.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc----cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK----YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~   88 (303)
                      .++|+|+|||||||||++++++|+++|++|++++|+.......   .......++++++.+|++|++++.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            3577999999999999999999999999999999975432110   0011122569999999999999999988    59


Q ss_pred             CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh--h
Q psy4233          89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR--E  166 (303)
Q Consensus        89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~--~  166 (303)
                      |+||||++.... .....+++|+.++.++++++++.++++||++||.+++.        +...|..+|...|+.++.  .
T Consensus       138 D~Vi~~aa~~~~-~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------p~~~~~~sK~~~E~~l~~~~~  208 (390)
T PLN02657        138 DVVVSCLASRTG-GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------PLLEFQRAKLKFEAELQALDS  208 (390)
T ss_pred             cEEEECCccCCC-CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------cchHHHHHHHHHHHHHHhccC
Confidence            999999885322 22345678999999999999999999999999998763        346789999999999986  6


Q ss_pred             CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-ccc
Q psy4233         167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRY  245 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~  245 (303)
                      +++++++||+.+||+...   .+ ..+. .++.+.++|+|...+.++||++|+|++++.++.++...+++||++++ +.+
T Consensus       209 gl~~tIlRp~~~~~~~~~---~~-~~~~-~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~  283 (390)
T PLN02657        209 DFTYSIVRPTAFFKSLGG---QV-EIVK-DGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKAL  283 (390)
T ss_pred             CCCEEEEccHHHhcccHH---HH-Hhhc-cCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCccc
Confidence            899999999999975322   11 1222 45566678888765346899999999999999766666889999986 689


Q ss_pred             CHHHHHHHHHHHhcCCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+.|+++.+++.+|+++.+
T Consensus       284 S~~Eia~~l~~~lG~~~~~  302 (390)
T PLN02657        284 TPLEQGEMLFRILGKEPKF  302 (390)
T ss_pred             CHHHHHHHHHHHhCCCCce
Confidence            9999999999999998763

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=2.7e-33  Score=247.54  Aligned_cols=245  Identities=14%  Similarity=0.099  Sum_probs=180.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--chhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +++++++||||||+||||++++++|+++|++|++++|+.......  .......++++++.+|++|.+++.++++++|+|
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   84 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV   84 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence            345688999999999999999999999999999998875432111  111111235899999999999999999999999


Q ss_pred             EEccccCcc--ccch-hhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCCC----------C---------CCCCC
Q psy4233          92 INLIGREFA--TKNF-TIADANVEIPARLARLSKEM-GVEKFIHISALNADPNPP----------T---------YYISG  148 (303)
Q Consensus        92 i~~a~~~~~--~~~~-~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~----------~---------~~~~~  148 (303)
                      ||+|+....  ..+. .++++|+.++.++++++.+. +++++|++||..+|+...          +         .+..|
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            999986322  2232 46789999999999999886 588999999999886321          1         12245


Q ss_pred             CCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch-h-hHHHHHHHh-hhcceeeec-CCCce---eeCceeHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-L-RYYGHMWRH-VFRKLAVYK-KGEET---IKQPVYVG  217 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-~-~~~~~~~~~-~~~~~~~~~-~~~~~---~~~~i~~~  217 (303)
                      .++|+.+|..+|.+++.+    +++++++||+++|||+... . ..+...... .++.+.+.+ .+.+.   .++|+|++
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence            678999999999988763    7999999999999997431 1 111111111 333444444 22221   16999999


Q ss_pred             HHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         218 DVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       218 Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      |+|++++.+++.+.. ++.| +++++.+|+.|+++.+.+.++.
T Consensus       245 D~a~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        245 DVCRAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             HHHHHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence            999999999987543 3468 5566779999999999998864

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=3.5e-33  Score=241.33  Aligned_cols=219  Identities=19%  Similarity=0.241  Sum_probs=180.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~~   97 (303)
                      ||||||||||||++++++|+++|++|++++|+                    .+|+.|.+++.+++++  +|+|||+++.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence            58999999999999999999999999999885                    4688999999999987  4999999986


Q ss_pred             Ccc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhhC
Q psy4233          98 EFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLREF  167 (303)
Q Consensus        98 ~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~~  167 (303)
                      ...    ..+...+++|+.++.++++++++.+. ++|++||..+|+..      |+.+..+.++|+.+|..+|++++.++
T Consensus        61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~  139 (287)
T TIGR01214        61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAG  139 (287)
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhC
Confidence            432    23456789999999999999999886 89999999988652      34455677899999999999999999


Q ss_pred             CCEEEEeecceeeCCC--chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         168 PEATIFRPSDMYGSGD--KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      .+++++||+++|||+.  .+...+..... .++.+++.+  .+. ++++|++|+|++++.++.++...+++||+++++.+
T Consensus       140 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~  215 (287)
T TIGR01214       140 PNALIVRTSWLYGGGGGRNFVRTMLRLAG-RGEELRVVD--DQI-GSPTYAKDLARVIAALLQRLARARGVYHLANSGQC  215 (287)
T ss_pred             CCeEEEEeeecccCCCCCCHHHHHHHHhh-cCCCceEec--CCC-cCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCc
Confidence            9999999999999974  22222222222 334455554  344 78999999999999999875455779999999999


Q ss_pred             CHHHHHHHHHHHhcCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~  263 (303)
                      |+.|+++.+++.+|++..
T Consensus       216 s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       216 SWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             CHHHHHHHHHHHhCcccc
Confidence            999999999999998753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.3e-33  Score=245.40  Aligned_cols=238  Identities=18%  Similarity=0.190  Sum_probs=177.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--chhc-CCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++|||||||||||++++++|+++|++|++++|+.......  +... ...++++++.+|+.|++.+..+++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            57999999999999999999999999999999975432111  1111 11246899999999999999999999999999


Q ss_pred             cccCcc--ccch-hhhhhhcchHHHHHHHHHhc-CCceEEEEecCcc--CCCC---------CCCCCCC------CCchh
Q psy4233          95 IGREFA--TKNF-TIADANVEIPARLARLSKEM-GVEKFIHISALNA--DPNP---------PTYYISG------GSQFY  153 (303)
Q Consensus        95 a~~~~~--~~~~-~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~--~~~~---------~~~~~~~------~~~y~  153 (303)
                      |+....  ..+. .++++|+.++.++++++.+. +++++||+||.++  |+..         |+.+..|      .+.|+
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  163 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV  163 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence            986422  2333 68899999999999999887 8899999999863  5421         1122222      25799


Q ss_pred             HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      .+|..+|++++.    .+++++++||+.+|||+.... ......+.......+.+  +.+. ++|+|++|+|++++.+++
T Consensus       164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF--PNAS-YRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC--CCCC-cCeEEHHHHHHHHHHHhc
Confidence            999999998765    489999999999999975321 11222221110111112  2344 799999999999999998


Q ss_pred             CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ++...+ .|++. ++.+|+.|+++.+.+.++.
T Consensus       241 ~~~~~~-~~~~~-g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        241 IPSASG-RYCLV-ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             CcCcCC-cEEEe-CCCCCHHHHHHHHHHHCCC
Confidence            765444 78886 5779999999999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8e-33  Score=243.23  Aligned_cols=238  Identities=18%  Similarity=0.165  Sum_probs=179.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++|+||||||+||||++++++|+++|++|++++|+.........   ......+++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            46899999999999999999999999999998887543221111   111124689999999999999999999999999


Q ss_pred             ccccCc----cccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC-----------CCCCCCCC------CCc
Q psy4233          94 LIGREF----ATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN-----------PPTYYISG------GSQ  151 (303)
Q Consensus        94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-----------~~~~~~~~------~~~  151 (303)
                      +|+...    ...+...+++|+.++.++++++.+. ++++||++||..++..           +|+.+..|      .++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            999632    1234567899999999999999875 5789999999877542           12223322      367


Q ss_pred             hhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       152 y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |+.+|..+|.+++.    .+++++++||+.+|||+.... .....++.. ..+..+ ++  .+. ++|+|++|+|++++.
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~--~~~-r~~i~v~Dva~a~~~  239 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FN--TTH-HRFVDVRDVALAHVK  239 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CC--CcC-cCeeEHHHHHHHHHH
Confidence            99999999998875    379999999999999976431 122222221 112222 22  234 689999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      +++++.. ++.||++ ++.+|+.|+++.+.+.++.
T Consensus       240 ~l~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        240 ALETPSA-NGRYIID-GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             HhcCccc-CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            9987554 4589995 5689999999999999974

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=8.6e-33  Score=245.49  Aligned_cols=241  Identities=15%  Similarity=0.097  Sum_probs=177.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .+.++|||||||||||++++++|+++|++|++++|+..........   .....+++++.+|+.|.+.+.++++++|+||
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            3467999999999999999999999999999999975432211111   0111358899999999999999999999999


Q ss_pred             EccccCcc--ccc-hhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC--------CCC---------CCCCCCc
Q psy4233          93 NLIGREFA--TKN-FTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP--------PTY---------YISGGSQ  151 (303)
Q Consensus        93 ~~a~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~--------~~~---------~~~~~~~  151 (303)
                      |+|+....  ..+ ...+++|+.++.+++++|++.+ +++|||+||.++++..        |..         +..+.++
T Consensus        83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  162 (351)
T PLN02650         83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM  162 (351)
T ss_pred             EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence            99986422  123 3678999999999999999887 7899999999765431        110         1123458


Q ss_pred             hhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       152 y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |+.+|..+|.+++.+    +++++++||+++|||+...  ...+...+.........++. .+. ++|+|++|+|++++.
T Consensus       163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-r~~v~V~Dva~a~~~  240 (351)
T PLN02650        163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSI-IKQ-GQFVHLDDLCNAHIF  240 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCc-CCC-cceeeHHHHHHHHHH
Confidence            999999999988653    7999999999999997532  11111111111111122222 223 699999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      +++++...+ .| +++++.+|+.|+++.+.+.++.
T Consensus       241 ~l~~~~~~~-~~-i~~~~~~s~~el~~~i~~~~~~  273 (351)
T PLN02650        241 LFEHPAAEG-RY-ICSSHDATIHDLAKMLREKYPE  273 (351)
T ss_pred             HhcCcCcCc-eE-EecCCCcCHHHHHHHHHHhCcc
Confidence            998654434 78 6677889999999999998863

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.6e-33  Score=248.61  Aligned_cols=243  Identities=13%  Similarity=0.046  Sum_probs=184.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---C----CCCceEEEecCCCCHHHHHHHhc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---G----DLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~----~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      .++++|+||||||+||||++++++|+++|++|++++|+.... +.+...   +    ...+++++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~-~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK-EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            456789999999999999999999999999999988864321 111110   0    01258899999999999999999


Q ss_pred             ccCEEEEccccCccc----cchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCc--cCCC--C--------CC------
Q psy4233          87 YSNVVINLIGREFAT----KNFTIADANVEIPARLARLSKEM-GVEKFIHISALN--ADPN--P--------PT------  143 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~--~~~~--~--------~~------  143 (303)
                      ++|+|||+++.....    ......+.|+.++.++++++++. +++|+||+||..  +|+.  .        ++      
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            999999999864322    22456788999999999999986 799999999963  4542  1        11      


Q ss_pred             CCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         144 YYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       144 ~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      .+..+.++|+.+|..+|++++.+    +++++++||+++|||+...  ...+...+  . +..+++++|.   .+|+|++
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~--~-g~~~~~g~g~---~~~v~V~  281 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYL--K-GAQEMLADGL---LATADVE  281 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHh--c-CCCccCCCCC---cCeEEHH
Confidence            12234568999999999998653    7999999999999997532  11122222  2 2355665543   4699999


Q ss_pred             HHHHHHHHHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         218 DVAAAIVAACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       218 Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+|++++.+++..  ...+++| +++++.+++.|+++.+.+.+|.+...
T Consensus       282 Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~  329 (367)
T PLN02686        282 RLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINK  329 (367)
T ss_pred             HHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCc
Confidence            9999999999742  2345688 88889999999999999999987554

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-32  Score=244.43  Aligned_cols=243  Identities=14%  Similarity=0.091  Sum_probs=175.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +.+.|+||||||+||||++++++|+++|++|++++|+...............+++++.+|+.|.+.+.++++++|+|||+
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            45678999999999999999999999999999999875332211111111246899999999999999999999999999


Q ss_pred             cccCcc------ccchhh-----hhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-----------CC--CCC---
Q psy4233          95 IGREFA------TKNFTI-----ADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-----------PT--YYI---  146 (303)
Q Consensus        95 a~~~~~------~~~~~~-----~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-----------~~--~~~---  146 (303)
                      |+....      ..+..+     ++.|+.++.+++++|++.+ +++||++||.++|+..           |+  .|.   
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            986432      123333     3445689999999998875 7899999999998631           11  111   


Q ss_pred             ----CCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHh-hhc--ceeeecCCCce---e
Q psy4233         147 ----SGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRH-VFR--KLAVYKKGEET---I  210 (303)
Q Consensus       147 ----~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~-~~~--~~~~~~~~~~~---~  210 (303)
                          .+.++|+.+|.++|+++..+    +++++++||+++|||+...  ...+..++.. .+.  ..+..+ +.+.   .
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~  245 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILS-AVNSRMGS  245 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccc-ccccccCc
Confidence                13358999999999988764    7999999999999997531  1112112111 111  112221 1111   1


Q ss_pred             eCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         211 KQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ++|||++|+|++++.+++.+.. +..|+ ++++.+++.|+++.+++.++.
T Consensus       246 ~dfi~v~Dva~a~~~~l~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        246 IALVHIEDICDAHIFLMEQTKA-EGRYI-CCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             eeEEeHHHHHHHHHHHHhCCCc-CccEE-ecCCCCCHHHHHHHHHHhCCC
Confidence            5899999999999999986443 34785 567789999999999999974

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8.8e-33  Score=242.65  Aligned_cols=236  Identities=18%  Similarity=0.212  Sum_probs=177.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--c-hhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--L-RLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++|||||||||||++++++|+++|++|++++|+.......  + ...+..++++++.+|++|.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            57999999999999999999999999999999975432111  1 11111246899999999999999999999999999


Q ss_pred             cccCcc--ccc-hhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccC--CCC---------CCCCC------CCCCchh
Q psy4233          95 IGREFA--TKN-FTIADANVEIPARLARLSKEM-GVEKFIHISALNAD--PNP---------PTYYI------SGGSQFY  153 (303)
Q Consensus        95 a~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~--~~~---------~~~~~------~~~~~y~  153 (303)
                      |+....  ..+ ...++.|+.++.+++++|++. +++|+|++||.+++  +..         |+.+.      .+.+.|+
T Consensus        85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  164 (322)
T PLN02986         85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYP  164 (322)
T ss_pred             CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchH
Confidence            986422  223 246889999999999999986 68999999998753  321         11111      1347799


Q ss_pred             HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|..+|.++++    ++++++++||+.+|||..... .....++..  .+..  .++  .+. ++|+|++|+|++++.+
T Consensus       165 ~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~~--~~~-~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        165 LSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LFN--NRF-YRFVDVRDVALAHIKA  239 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CCC--CcC-cceeEHHHHHHHHHHH
Confidence            999999988776    479999999999999965321 111111111  2222  222  344 7899999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ++++...+ .||++ ++.+|+.|+++.+.+.++.
T Consensus       240 l~~~~~~~-~yni~-~~~~s~~e~~~~i~~~~~~  271 (322)
T PLN02986        240 LETPSANG-RYIID-GPIMSVNDIIDILRELFPD  271 (322)
T ss_pred             hcCcccCC-cEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            98765544 89994 5689999999999999874

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=1.4e-33  Score=242.63  Aligned_cols=220  Identities=25%  Similarity=0.348  Sum_probs=168.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      ||||||||+|+||++|.++|.++|++|+++.|.                    ..|+.|.+.+.+.++.  +|+|||||+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa   60 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA   60 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence            799999999999999999999999999999775                    4678899999998876  899999998


Q ss_pred             cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ..    .+..++..+.+|+.++.+|+++|++.+. ++||+||..||+.      .|+.+++|.+.||++|.++|+.+++.
T Consensus        61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            64    3357788999999999999999999998 9999999999855      35566788999999999999999998


Q ss_pred             CCCEEEEeecceeeCC-CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC---CCcEEEEeCC
Q psy4233         167 FPEATIFRPSDMYGSG-DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA---AGKIYQAVGP  242 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---~g~~~~i~~~  242 (303)
                      ..++.|+|++++||+. .++...+...+. .++.+.++.  ++. +++++++|+|+++..++++...   .+.+||++++
T Consensus       140 ~~~~~IlR~~~~~g~~~~~~~~~~~~~~~-~~~~i~~~~--d~~-~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~  215 (286)
T PF04321_consen  140 CPNALILRTSWVYGPSGRNFLRWLLRRLR-QGEPIKLFD--DQY-RSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP  215 (286)
T ss_dssp             -SSEEEEEE-SEESSSSSSHHHHHHHHHH-CTSEEEEES--SCE-E--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B
T ss_pred             cCCEEEEecceecccCCCchhhhHHHHHh-cCCeeEeeC--Cce-eCCEEHHHHHHHHHHHHHhcccccccceeEEEecC
Confidence            8899999999999993 345555554443 556666653  334 7899999999999999986422   2459999999


Q ss_pred             cccCHHHHHHHHHHHhcCCCC
Q psy4233         243 KRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       243 ~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +.+|+.|+++.+++.+|.+..
T Consensus       216 ~~~S~~e~~~~i~~~~~~~~~  236 (286)
T PF04321_consen  216 ERVSRYEFAEAIAKILGLDPE  236 (286)
T ss_dssp             S-EEHHHHHHHHHHHHTHCTT
T ss_pred             cccCHHHHHHHHHHHhCCCCc
Confidence            999999999999999998874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=5e-33  Score=242.74  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=169.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HH-HHHHhc-----ccCEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DE-IRKAIK-----YSNVV   91 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~-~~~~~~-----~~D~v   91 (303)
                      |||||||||||++|+++|+++|++++++.|+.......         ..+..+|+.|.   ++ +..++.     ++|+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V   72 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI   72 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence            89999999999999999999999877777754321110         12234555553   33 233332     58999


Q ss_pred             EEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHH
Q psy4233          92 INLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        92 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      ||+|+....  ..+...++.|+.++.+|+++|++.++ ++||+||..+|+..      |..+..|.++|+.+|..+|+++
T Consensus        73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  151 (308)
T PRK11150         73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYV  151 (308)
T ss_pred             EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHH
Confidence            999985322  23445789999999999999999987 79999999998863      2334567789999999999988


Q ss_pred             Hhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeee-cCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         164 LRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVY-KKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       164 ~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      +.+    +++++++||+++|||+....    .....+.+.  .+....++ +++... ++|+|++|+|++++.+++++. 
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~-r~~i~v~D~a~a~~~~~~~~~-  229 (308)
T PRK11150        152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK-RDFVYVGDVAAVNLWFWENGV-  229 (308)
T ss_pred             HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee-eeeeeHHHHHHHHHHHHhcCC-
Confidence            875    78999999999999975321    112222222  23333344 344445 899999999999999987643 


Q ss_pred             CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         233 AGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                       +++||+++++.+|+.|+++.+.+.+|.
T Consensus       230 -~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        230 -SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             -CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence             459999999999999999999999985

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=3.5e-32  Score=237.17  Aligned_cols=222  Identities=16%  Similarity=0.126  Sum_probs=174.9

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccccCc
Q psy4233          22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIGREF   99 (303)
Q Consensus        22 lVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~~~~   99 (303)
                      ||||||||||++|+++|+++|++|+++.+.                   ..+|+.|.+++.++++.  +|+|||+|+...
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~   61 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVG   61 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence            699999999999999999999988866432                   14789999999998875  799999998632


Q ss_pred             -----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC------C----CCCCCC-chhHHHHHHHHHH
Q psy4233         100 -----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT------Y----YISGGS-QFYRTKYQGEKEV  163 (303)
Q Consensus       100 -----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~------~----~~~~~~-~y~~~K~~~e~~~  163 (303)
                           ...+..+++.|+.++.+|+++|++.+++++|++||..+|+....      .    |..|.+ .|+.+|..+|+++
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725         62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence                 24566788999999999999999999999999999999985322      1    333433 4999999999877


Q ss_pred             Hh----hCCCEEEEeecceeeCCCchh----hHHHHHH----Hh--hhcceee-ecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         164 LR----EFPEATIFRPSDMYGSGDKFL----RYYGHMW----RH--VFRKLAV-YKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       164 ~~----~~~~~~ilrp~~~~G~~~~~~----~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      +.    .+++++++||+.+|||+..+.    ..+..++    ..  .+..+.+ ++++.+. ++|+|++|++++++.+++
T Consensus       142 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dv~~~~~~~~~  220 (306)
T PLN02725        142 QAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPL-REFLHVDDLADAVVFLMR  220 (306)
T ss_pred             HHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCee-eccccHHHHHHHHHHHHh
Confidence            54    489999999999999975321    1122222    11  2333444 6777777 899999999999999998


Q ss_pred             CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +... ++.||+++++.+|+.|+++.+++.+|.+..+
T Consensus       221 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~  255 (306)
T PLN02725        221 RYSG-AEHVNVGSGDEVTIKELAELVKEVVGFEGEL  255 (306)
T ss_pred             cccc-CcceEeCCCCcccHHHHHHHHHHHhCCCCce
Confidence            6433 4578999999999999999999999976543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=7.6e-32  Score=237.20  Aligned_cols=235  Identities=23%  Similarity=0.234  Sum_probs=183.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+|+||||+||||+++++.|+++|++|++++|+..... .+.    ..+++++.+|+.|.+++.++++++|+|||+++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLE----GLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccc----cCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            58999999999999999999999999999999754321 111    1358999999999999999999999999999853


Q ss_pred             --ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCC---CCchhHHHHHHHHHHHhh
Q psy4233          99 --FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISG---GSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        99 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~---~~~y~~~K~~~e~~~~~~  166 (303)
                        ....+...++.|+.++.++++++++.+++++|++||..+|+..       |+.+..+   .++|+.+|..+|++++..
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  155 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM  155 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence              2334567889999999999999999999999999999988741       2223222   457999999999988774


Q ss_pred             ----CCCEEEEeecceeeCCCchhhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         167 ----FPEATIFRPSDMYGSGDKFLRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       167 ----~~~~~ilrp~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                          +++++++||+.+|||+.........++. ...+..+...  ... .+|+|++|+|++++.+++++ ..+..|++ +
T Consensus       156 ~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~i~v~D~a~a~~~~~~~~-~~~~~~~~-~  230 (328)
T TIGR03466       156 AAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--DTG-LNLVHVDDVAEGHLLALERG-RIGERYIL-G  230 (328)
T ss_pred             HHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--CCC-cceEEHHHHHHHHHHHHhCC-CCCceEEe-c
Confidence                7899999999999997542222222211 1222333332  223 58999999999999999864 35778877 4


Q ss_pred             CcccCHHHHHHHHHHHhcCCCC
Q psy4233         242 PKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       242 ~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++.+|+.|+++.+++.+|++.+
T Consensus       231 ~~~~s~~e~~~~i~~~~g~~~~  252 (328)
T TIGR03466       231 GENLTLKQILDKLAEITGRPAP  252 (328)
T ss_pred             CCCcCHHHHHHHHHHHhCCCCC
Confidence            6889999999999999998765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=3e-32  Score=239.06  Aligned_cols=231  Identities=13%  Similarity=0.161  Sum_probs=181.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +++|+||||||+||||++++++|+++|  ++|++++|+.... ..+.......+++++.+|++|.+.+.++++++|+|||
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih   80 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVH   80 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence            357899999999999999999999986  7899998864432 1111111114689999999999999999999999999


Q ss_pred             ccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh----
Q psy4233          94 LIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR----  165 (303)
Q Consensus        94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~----  165 (303)
                      +||...    ...+...+++|+.++.++++++++.++++||++||....        .|.++|+.+|..+|++++.    
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--------~p~~~Y~~sK~~~E~l~~~~~~~  152 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--------NPINLYGATKLASDKLFVAANNI  152 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC--------CCCCHHHHHHHHHHHHHHHHHhh
Confidence            998632    234557889999999999999999999999999996433        4568899999999998854    


Q ss_pred             ---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         166 ---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       166 ---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                         .+++++++||+++|||+......+..... .+. .+++. ++.+. ++|+|++|+|++++.++++. ..+++| +.+
T Consensus       153 ~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~-~~~~~~~i~-~~~~~-r~~i~v~D~a~a~~~al~~~-~~~~~~-~~~  227 (324)
T TIGR03589       153 SGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKE-EGVTELPIT-DPRMT-RFWITLEQGVNFVLKSLERM-LGGEIF-VPK  227 (324)
T ss_pred             ccccCcEEEEEeecceeCCCCCcHHHHHHHHH-hCCCCeeeC-CCCce-EeeEEHHHHHHHHHHHHhhC-CCCCEE-ccC
Confidence               37999999999999997655444444332 232 45554 55666 89999999999999999864 346677 566


Q ss_pred             CcccCHHHHHHHHHHHhcC
Q psy4233         242 PKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       242 ~~~~s~~e~~~~i~~~~g~  260 (303)
                      +..+++.|+++.+.+....
T Consensus       228 ~~~~sv~el~~~i~~~~~~  246 (324)
T TIGR03589       228 IPSMKITDLAEAMAPECPH  246 (324)
T ss_pred             CCcEEHHHHHHHHHhhCCe
Confidence            6779999999999997654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG0747|consensus

Probab=100.00  E-value=1.3e-32  Score=223.64  Aligned_cols=244  Identities=16%  Similarity=0.178  Sum_probs=207.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecC-CCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      .++++||||.||||++.++.+...-  ++.+.++-- --+....+......++..++++|+.+...+..++..  +|.||
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            4799999999999999999999874  555554331 112234444445668899999999999988887765  89999


Q ss_pred             EccccC----ccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHH
Q psy4233          93 NLIGRE----FATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        93 ~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e  160 (303)
                      |.|+..    ....+..+...|+.++..|+++++.+| +++|||+||..|||+.       |...++|.++|+.+|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            999863    345667788999999999999999985 8999999999999983       4556789999999999999


Q ss_pred             HHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         161 KEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       161 ~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      ..++++    +++++++|.++||||++.....++++++.  .++..++.|+|.+. ++|+|++|+++++-.+++. ...|
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~-rs~l~veD~~ea~~~v~~K-g~~g  243 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQT-RSYLYVEDVSEAFKAVLEK-GELG  243 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccc-eeeEeHHHHHHHHHHHHhc-CCcc
Confidence            999886    79999999999999999988888877763  78899999999999 8999999999999999986 4569


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++|||++..+++..|+++.|++.+++..+
T Consensus       244 eIYNIgtd~e~~~~~l~k~i~eli~~~~~  272 (331)
T KOG0747|consen  244 EIYNIGTDDEMRVIDLAKDICELFEKRLP  272 (331)
T ss_pred             ceeeccCcchhhHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999988433

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=2.3e-32  Score=244.82  Aligned_cols=230  Identities=17%  Similarity=0.172  Sum_probs=177.0

Q ss_pred             CCcEEEEE----cCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----h--cCCCCceEEEecCCCCHHHHHHHh-
Q psy4233          17 NGVVATVF----GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----L--CGDLGQVLFQPYHPRNDDEIRKAI-   85 (303)
Q Consensus        17 ~~~~vlVt----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~~~~Dl~d~~~~~~~~-   85 (303)
                      ++++||||    |||||||++++++|+++||+|++++|+.........    .  .....+++++.+|+.|   +.+++ 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            46789999    999999999999999999999999998643211000    0  0001358999999877   33443 


Q ss_pred             -cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCC---CCCchhHHHHHHHH
Q psy4233          86 -KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYIS---GGSQFYRTKYQGEK  161 (303)
Q Consensus        86 -~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~---~~~~y~~~K~~~e~  161 (303)
                       .++|+|||+++.            +..++.+++++|++.|+++|||+||.++|+..+..|..   +..++. +|..+|+
T Consensus       128 ~~~~d~Vi~~~~~------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~  194 (378)
T PLN00016        128 GAGFDVVYDNNGK------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEA  194 (378)
T ss_pred             cCCccEEEeCCCC------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHH
Confidence             469999999763            23467899999999999999999999999864332221   122333 8999999


Q ss_pred             HHHhhCCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         162 EVLREFPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       162 ~~~~~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      ++++.+++++++||+++|||+...  ..++...+. .++.+++++++.+. ++|+|++|+|++++.+++++...+++||+
T Consensus       195 ~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~-~~~~i~~~g~g~~~-~~~i~v~Dva~ai~~~l~~~~~~~~~yni  272 (378)
T PLN00016        195 YLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLV-RGRPVPIPGSGIQL-TQLGHVKDLASMFALVVGNPKAAGQIFNI  272 (378)
T ss_pred             HHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHH-cCCceeecCCCCee-eceecHHHHHHHHHHHhcCccccCCEEEe
Confidence            999999999999999999996532  122222222 45567777777777 89999999999999999876566789999


Q ss_pred             eCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         240 VGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       240 ~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++++.+|+.|+++.+++.+|.+..+
T Consensus       273 ~~~~~~s~~el~~~i~~~~g~~~~i  297 (378)
T PLN00016        273 VSDRAVTFDGMAKACAKAAGFPEEI  297 (378)
T ss_pred             cCCCccCHHHHHHHHHHHhCCCCce
Confidence            9999999999999999999987653

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.4e-31  Score=235.42  Aligned_cols=244  Identities=18%  Similarity=0.182  Sum_probs=186.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~~   97 (303)
                      |||||||||+||++++++|+++|++|+++.|................+++++.+|+.|.+++.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            6899999999999999999999999998866433222221111111257889999999999999887  59999999986


Q ss_pred             Ccc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh--
Q psy4233          98 EFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR--  165 (303)
Q Consensus        98 ~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~--  165 (303)
                      ...    ..+...++.|+.++.++++++++.+++++|++||..+|+..      |+.+..+.+.|+.+|..+|.+++.  
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence            321    24456788999999999999999998999999999888653      444556778999999999998875  


Q ss_pred             ---hCCCEEEEeecceeeCCCch---------hhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHHHHHHH
Q psy4233         166 ---EFPEATIFRPSDMYGSGDKF---------LRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       166 ---~~~~~~ilrp~~~~G~~~~~---------~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~  224 (303)
                         .+++++++||+.+|||....         ...+..+...   ....+.+++      ++... ++|+|++|+|++++
T Consensus       161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~~~D~a~~~~  239 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCV-RDYIHVMDLADAHL  239 (328)
T ss_pred             HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceE-EeeeeHHHHHHHHH
Confidence               37899999999999985321         1122222211   223333333      34445 79999999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      .++.+.  ...+++||+++++++|+.|+++.+++.+|++..+
T Consensus       240 ~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~  281 (328)
T TIGR01179       240 AALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPV  281 (328)
T ss_pred             HHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcce
Confidence            998752  2346799999999999999999999999987653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.7e-32  Score=224.58  Aligned_cols=218  Identities=22%  Similarity=0.254  Sum_probs=184.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+|||||++|++|++|+++|. .+++|++++|..                    +|++|++.+.++++.  +|+|||+|+
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~AA   59 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAAA   59 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECcc
Confidence            459999999999999999999 669999999863                    679999999999985  899999999


Q ss_pred             cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ..    .+..++..+.+|..++.+++++|++.|. ++||+||-.||..      .|+++..|.+.||++|+..|..+++.
T Consensus        60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          60 YTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             ccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            74    3456678999999999999999999998 9999999999765      35566788999999999999999999


Q ss_pred             CCCEEEEeecceeeCCC-chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         167 FPEATIFRPSDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      +.+.+|+|.+++||... +|...+.++.. .++.+.+.  .++. .++++..|+|+++..+++.....+ +||+.+....
T Consensus       139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~-~~~~l~vv--~Dq~-gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~~g~~  213 (281)
T COG1091         139 GPRHLILRTSWVYGEYGNNFVKTMLRLAK-EGKELKVV--DDQY-GSPTYTEDLADAILELLEKEKEGG-VYHLVNSGEC  213 (281)
T ss_pred             CCCEEEEEeeeeecCCCCCHHHHHHHHhh-cCCceEEE--CCee-eCCccHHHHHHHHHHHHhccccCc-EEEEeCCCcc
Confidence            99999999999999854 44444444443 44455554  3444 789999999999999998765544 9999999999


Q ss_pred             CHHHHHHHHHHHhcCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~  263 (303)
                      ||.|+++.|.+.++.+..
T Consensus       214 Swydfa~~I~~~~~~~~~  231 (281)
T COG1091         214 SWYEFAKAIFEEAGVDGE  231 (281)
T ss_pred             cHHHHHHHHHHHhCCCcc
Confidence            999999999999986553

>KOG1429|consensus

Probab=100.00  E-value=7.1e-32  Score=219.22  Aligned_cols=268  Identities=17%  Similarity=0.111  Sum_probs=210.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      .++++|+||||.||||+||++.|+.+||+|++++-........+..+-..+.++.+.-|+..+     ++.++|-|+|+|
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLA   99 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLA   99 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhc
Confidence            457899999999999999999999999999999987766655555555556677777666444     788899999999


Q ss_pred             ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC-----------CCCCCchhHHHHHHH
Q psy4233          96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY-----------ISGGSQFYRTKYQGE  160 (303)
Q Consensus        96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-----------~~~~~~y~~~K~~~e  160 (303)
                      +...    ..+|-.....|+.++.+++..|++.+ +||++.||..+|+++...|           ..+...|...|+.+|
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE  178 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE  178 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence            8633    35667788899999999999999988 5999999999999976554           345778999999999


Q ss_pred             HHHHhh----CCCEEEEeecceeeCCCc--hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         161 KEVLRE----FPEATIFRPSDMYGSGDK--FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       161 ~~~~~~----~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      .++.++    |+.+.|.|+.+.|||...  ....++.++.+  +..++.++|+|.|. ++|.++.|+.++++.+++++..
T Consensus       179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qt-RSF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQT-RSFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcce-EEEEeHHHHHHHHHHHhcCCCc
Confidence            998876    799999999999999753  23334444433  78899999999999 8999999999999999997654


Q ss_pred             CCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         233 AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                       + .+|+++++.+|..|+++.+.+..+-...+ +.....+-| .-.-.......+.++|-|-
T Consensus       258 -~-pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp-~kR~pDit~ake~LgW~Pk  316 (350)
T KOG1429|consen  258 -G-PVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDP-RKRKPDITKAKEQLGWEPK  316 (350)
T ss_pred             -C-CcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCc-cccCccHHHHHHHhCCCCC
Confidence             3 59999999999999999999999654433 221111222 2333344455666666554

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-32  Score=258.08  Aligned_cols=242  Identities=16%  Similarity=0.157  Sum_probs=184.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHH--hCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCH------HHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLG--KQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRND------DEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll--~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D   89 (303)
                      |+|||||||||||++++++|+  ++|++|++++|+.... ...+.......+++++.+|+.|+      +.+..+ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            589999999999999999999  5789999999964321 11111000124699999999984      455555 8899


Q ss_pred             EEEEccccCc-cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC--------CCCCCCCchhHHHHHHH
Q psy4233          90 VVINLIGREF-ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT--------YYISGGSQFYRTKYQGE  160 (303)
Q Consensus        90 ~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~--------~~~~~~~~y~~~K~~~e  160 (303)
                      +|||||+... ........++|+.++.+++++|++.+++++||+||..+|+..+.        .+..+.++|+.+|+++|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            9999999643 23445678899999999999999999999999999999864321        12233578999999999


Q ss_pred             HHHHh-hCCCEEEEeecceeeCCCch-------hhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         161 KEVLR-EFPEATIFRPSDMYGSGDKF-------LRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       161 ~~~~~-~~~~~~ilrp~~~~G~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      +++++ .+++++++||+++|||....       ...+...+..   .....+..+.+... .+++|++|+++++..++..
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~vddva~ai~~~~~~  238 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGR-TNIVPVDYVADALDHLMHK  238 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCe-eeeeeHHHHHHHHHHHhcC
Confidence            99985 58999999999999985321       0111112211   11223444555555 7899999999999999886


Q ss_pred             CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      +...|++||+++++++|+.|+++.+++.+|.+.
T Consensus       239 ~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        239 DGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             cCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            666788999999999999999999999999886

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.3e-31  Score=234.36  Aligned_cols=233  Identities=18%  Similarity=0.180  Sum_probs=178.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEcc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINLI   95 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~a   95 (303)
                      |||||||||||+++++.|+++|+ +|+++.|.....  .+...    ....+..|+.+.+.++.+.+    ++|+|||+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            69999999999999999999997 788887754321  11100    12456788888888877664    699999999


Q ss_pred             ccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCC-CCCCCCchhHHHHHHHHHHHhh-
Q psy4233          96 GRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTY-YISGGSQFYRTKYQGEKEVLRE-  166 (303)
Q Consensus        96 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~-~~~~~~~y~~~K~~~e~~~~~~-  166 (303)
                      +..  ....+...+++|+.++.+++++|++.++ ++|++||..+|+..     ++. +..|.+.|+.+|..+|++++++ 
T Consensus        75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             cccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence            863  2335567889999999999999999887 89999999999752     222 2346789999999999998752 


Q ss_pred             -----CCCEEEEeecceeeCCCch----hhHHHHHHHh--hhcceeee------cCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         167 -----FPEATIFRPSDMYGSGDKF----LRYYGHMWRH--VFRKLAVY------KKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       167 -----~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                           +++++++||+.+|||+...    ...+..++..  .+..+.++      ++|.+. ++|+|++|++++++.++..
T Consensus       154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQL-RDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCce-eeeEEHHHHHHHHHHHHhc
Confidence                 4689999999999997532    1223333332  33344443      455666 7999999999999999986


Q ss_pred             CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                        ..+++||+++++++|+.|+++.+++.+|.+..
T Consensus       233 --~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~  264 (314)
T TIGR02197       233 --GVSGIFNLGTGRARSFNDLADAVFKALGKDEK  264 (314)
T ss_pred             --ccCceEEcCCCCCccHHHHHHHHHHHhCCCCc
Confidence              34569999999999999999999999997753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1430|consensus

Probab=100.00  E-value=2.2e-31  Score=229.39  Aligned_cols=245  Identities=20%  Similarity=0.182  Sum_probs=195.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +++.+++||||+||+|++++++|++++  .+|++++..+... ......-....+++++.+|+.|...+..++.++ .|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            346799999999999999999999998  8999999876522 221111113467999999999999999999999 777


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC---------CCCCCCCCCCchhHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN---------PPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~---------~~~~~~~~~~~y~~~K~~~  159 (303)
                      |||+...    ...++..+++|+.+|.+++++|++.+++++||+||..|...         .++.|....++|+.+|..+
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a  160 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA  160 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence            7776422    23578899999999999999999999999999999999543         2333444457999999999


Q ss_pred             HHHHHhhC----CCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc-----C
Q psy4233         160 EKEVLREF----PEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-----D  229 (303)
Q Consensus       160 e~~~~~~~----~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~-----~  229 (303)
                      |+++++.+    +..+.+||+.+|||++. ....+..+++ .+......+.+... .++++++.+|.+.+.+..     .
T Consensus       161 E~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~-~g~~~f~~g~~~~~-~~~~~~~Nva~ahilA~~aL~~~~  238 (361)
T KOG1430|consen  161 EKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALK-NGGFLFKIGDGENL-NDFTYGENVAWAHILAARALLDKS  238 (361)
T ss_pred             HHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHH-ccCceEEeeccccc-cceEEechhHHHHHHHHHHHHhcC
Confidence            99999874    78999999999999986 3334444444 66667777777666 899999999888876542     3


Q ss_pred             CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +...|+.|++.+++++...++...+.+.+|...+
T Consensus       239 ~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  239 PSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             CccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            4568999999999999888888899999999866

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1e-31  Score=246.41  Aligned_cols=246  Identities=15%  Similarity=0.115  Sum_probs=188.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCccccc--ch-------hc-------C-C-----CCceEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRD--LR-------LC-------G-D-----LGQVLF   70 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~--~~-------~~-------~-~-----~~~~~~   70 (303)
                      .++++|||||||||||+++++.|++.+   .+|+++.|........  +.       ..       + .     .+++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            468899999999999999999999864   4789999976432211  10       00       0 0     157999


Q ss_pred             EecCCC-------CHHHHHHHhcccCEEEEccccCc-cccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCC
Q psy4233          71 QPYHPR-------NDDEIRKAIKYSNVVINLIGREF-ATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNP  141 (303)
Q Consensus        71 ~~~Dl~-------d~~~~~~~~~~~D~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~  141 (303)
                      +.+|++       |.+.+..+++++|+|||+|+... ...+....++|+.++.+++++|++. +++++|++||..+|+..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~  168 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK  168 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence            999998       45557778889999999999743 3456678899999999999999986 68899999999998752


Q ss_pred             CC----C--C---------------------------------------------------CCCCCchhHHHHHHHHHHH
Q psy4233         142 PT----Y--Y---------------------------------------------------ISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus       142 ~~----~--~---------------------------------------------------~~~~~~y~~~K~~~e~~~~  164 (303)
                      ..    .  |                                                   ....+.|+.+|+.+|+++.
T Consensus       169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~  248 (491)
T PLN02996        169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG  248 (491)
T ss_pred             CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence            10    0  0                                                   1124679999999999998


Q ss_pred             hh--CCCEEEEeecceeeCCCchhh-H------HHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC---
Q psy4233         165 RE--FPEATIFRPSDMYGSGDKFLR-Y------YGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP---  230 (303)
Q Consensus       165 ~~--~~~~~ilrp~~~~G~~~~~~~-~------~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---  230 (303)
                      ++  +++++++||+++|||...+.. +      ...++..  .+....++++|.+. +|+++++|++++++.++...   
T Consensus       249 ~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~-~D~v~Vddvv~a~l~a~~~~~~~  327 (491)
T PLN02996        249 NFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV-LDVIPADMVVNAMIVAMAAHAGG  327 (491)
T ss_pred             HhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee-cceecccHHHHHHHHHHHHhhcc
Confidence            86  799999999999998654311 1      1122221  44455678888888 89999999999999998752   


Q ss_pred             CCCCcEEEEeCC--cccCHHHHHHHHHHHhcCCC
Q psy4233         231 DAAGKIYQAVGP--KRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       231 ~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~  262 (303)
                      ...+++||++++  .++|+.|+++.+.+.++..+
T Consensus       328 ~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        328 QGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             CCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            124679999998  88999999999999887643

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.98  E-value=1.8e-30  Score=224.83  Aligned_cols=239  Identities=16%  Similarity=0.120  Sum_probs=171.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCcc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFA  100 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~  100 (303)
                      |||||||||||++++++|+++|++|++++|+....... ..      ..  ..|+.+ ..+...+.++|+|||+|+....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT-KW------EG--YKPWAP-LAESEALEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc-cc------ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence            69999999999999999999999999999986543221 10      11  112222 4455677889999999986432


Q ss_pred             ------ccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh-
Q psy4233         101 ------TKNFTIADANVEIPARLARLSKEMGVE--KFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR-  165 (303)
Q Consensus       101 ------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~-  165 (303)
                            ..+..+++.|+.++.++++++++.+++  ++|++||.++|+..      ++.+..+.+.|...+...|+.+.. 
T Consensus        71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~  150 (292)
T TIGR01777        71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAA  150 (292)
T ss_pred             cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhc
Confidence                  123467789999999999999999863  56667777777753      222233444556666666665443 


Q ss_pred             --hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         166 --EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       166 --~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                        .+++++++||+.+|||+......+...+.. .... .++++.+. ++|||++|+|++++.+++++.. +++||+++++
T Consensus       151 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~-~~g~~~~~-~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~  226 (292)
T TIGR01777       151 EDLGTRVVLLRTGIVLGPKGGALAKMLPPFRL-GLGG-PLGSGRQW-FSWIHIEDLVQLILFALENASI-SGPVNATAPE  226 (292)
T ss_pred             hhcCCceEEEeeeeEECCCcchhHHHHHHHhc-Cccc-ccCCCCcc-cccEeHHHHHHHHHHHhcCccc-CCceEecCCC
Confidence              479999999999999976433332222221 1111 24666666 8999999999999999987554 4599999999


Q ss_pred             ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHH
Q psy4233         244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL  282 (303)
Q Consensus       244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~  282 (303)
                      .+|+.|+++.+++.+|++..        ++ .|.+....
T Consensus       227 ~~s~~di~~~i~~~~g~~~~--------~~-~p~~~~~~  256 (292)
T TIGR01777       227 PVRNKEFAKALARALHRPAF--------FP-VPAFVLRA  256 (292)
T ss_pred             ccCHHHHHHHHHHHhCCCCc--------Cc-CCHHHHHH
Confidence            99999999999999998765        55 67766543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1371|consensus

Probab=99.97  E-value=2.6e-30  Score=215.02  Aligned_cols=246  Identities=19%  Similarity=0.125  Sum_probs=194.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hcCCCCceEEEecCCCCHHHHHHHhcc--cCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~v   91 (303)
                      .++||||||+||||+|.+.+|+++|+.|++++.-.......++    +.....++.++++|+.|.+.++++|+.  +|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            4689999999999999999999999999998765444333322    222246799999999999999999987  8999


Q ss_pred             EEccccC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCC-CCCchhHHHHHHH
Q psy4233          92 INLIGRE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYIS-GGSQFYRTKYQGE  160 (303)
Q Consensus        92 i~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~-~~~~y~~~K~~~e  160 (303)
                      +|.|+..    ..+.|..+++.|+.++.+|++++++++++++||.||+.+|+.+      |..|.. |.++|+.+|...|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            9999863    3467788999999999999999999999999999999999985      444555 8899999999999


Q ss_pred             HHHHhh----CCCEEEEeecceee--CCC----ch----hh---HHHHHHHhhhcceeeec------CCCceeeCceeHH
Q psy4233         161 KEVLRE----FPEATIFRPSDMYG--SGD----KF----LR---YYGHMWRHVFRKLAVYK------KGEETIKQPVYVG  217 (303)
Q Consensus       161 ~~~~~~----~~~~~ilrp~~~~G--~~~----~~----~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~  217 (303)
                      +++.+.    +..++.+|...++|  |..    .+    .+   .......-......++|      +|... +++||+-
T Consensus       162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~v-rdyi~v~  240 (343)
T KOG1371|consen  162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIV-RDYIHVL  240 (343)
T ss_pred             HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCee-ecceeeE
Confidence            999886    46788899999999  321    11    11   11111111222222222      34445 8999999


Q ss_pred             HHHHHHHHHhcCCC--CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         218 DVAAAIVAACKDPD--AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       218 Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |.|+....++....  ..-.+||+..+...+..++..+++++.|++.++
T Consensus       241 Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~  289 (343)
T KOG1371|consen  241 DLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK  289 (343)
T ss_pred             ehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc
Confidence            99999999998643  233499999999999999999999999998876

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=2.5e-30  Score=210.60  Aligned_cols=243  Identities=16%  Similarity=0.172  Sum_probs=183.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-ccCEEEEccccC-
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINLIGRE-   98 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~a~~~-   98 (303)
                      |+|||||||||++|+..|.+.||+|++++|+++.....+..     .+       ...+.+..... ++|+|||+||.+ 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----~v-------~~~~~~~~~~~~~~DavINLAG~~I   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----NV-------TLWEGLADALTLGIDAVINLAGEPI   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----cc-------cccchhhhcccCCCCEEEECCCCcc
Confidence            68999999999999999999999999999997654443211     11       12233444444 699999999963 


Q ss_pred             -----ccccchhhhhhhcchHHHHHHHHHh--cCCceEEEEecCccCCCCCCCCCCCCCchhH-------HHHHHHHHHH
Q psy4233          99 -----FATKNFTIADANVEIPARLARLSKE--MGVEKFIHISALNADPNPPTYYISGGSQFYR-------TKYQGEKEVL  164 (303)
Q Consensus        99 -----~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~-------~K~~~e~~~~  164 (303)
                           +.+..+.+.+..+..|..|+++..+  .+++.+|.-|.++.|++.++.+....++++.       ..|+.|..-.
T Consensus        69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a  148 (297)
T COG1090          69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA  148 (297)
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence                 3344567889999999999999985  4466777777778898865544333233222       2222222222


Q ss_pred             h-hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         165 R-EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       165 ~-~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                      + .+.+++.+|.|+|.+|..+.+..+....+.  ..=--+|+|.|+ ++|||++|++++|.+++++....| .||++++.
T Consensus       149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~--glGG~~GsGrQ~-~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~  224 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL--GLGGKLGSGRQW-FSWIHIEDLVNAILFLLENEQLSG-PFNLTAPN  224 (297)
T ss_pred             hhcCceEEEEEEEEEecCCCcchhhhcchhhh--ccCCccCCCCce-eeeeeHHHHHHHHHHHHhCcCCCC-cccccCCC
Confidence            2 378999999999999987766665544432  111336899999 899999999999999999877777 99999999


Q ss_pred             ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhhccC
Q psy4233         244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF  288 (303)
Q Consensus       244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~~~~  288 (303)
                      +++..++...+.+++++|..        ++ +|.+.....|+|..
T Consensus       225 PV~~~~F~~al~r~l~RP~~--------~~-vP~~~~rl~LGe~a  260 (297)
T COG1090         225 PVRNKEFAHALGRALHRPAI--------LP-VPSFALRLLLGEMA  260 (297)
T ss_pred             cCcHHHHHHHHHHHhCCCcc--------cc-CcHHHHHHHhhhhH
Confidence            99999999999999999988        78 99999888877643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=6.3e-30  Score=221.79  Aligned_cols=234  Identities=15%  Similarity=0.110  Sum_probs=174.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc--ccchh-cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV--RDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+++|+|||||||||++++++|+++|++|++++|+.....  ..+.. .....+++++.+|++|.+++.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4678999999999999999999999999999999632211  11111 11124689999999999999999999999999


Q ss_pred             ccccCccc--cchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccC--CCC---------CCCCCCC------CCchh
Q psy4233          94 LIGREFAT--KNFTIADANVEIPARLARLSKEM-GVEKFIHISALNAD--PNP---------PTYYISG------GSQFY  153 (303)
Q Consensus        94 ~a~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~--~~~---------~~~~~~~------~~~y~  153 (303)
                      +++.....  .....+++|+.++.++++++.+. +++++|++||.+++  +..         |+.+..+      ...|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            87653221  24578999999999999999886 58899999998764  211         1111111      12699


Q ss_pred             HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+|..+|+++++    .+++++++||+++|||+......   .+   ....+.++.+  . .+|||++|+|++++.+++.
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~---~~---~~~~~~~~~~--~-~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP---YL---KGAAQMYENG--V-LVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh---hh---cCCcccCccc--C-cceEEHHHHHHHHHHHhcC
Confidence            999999999865    38999999999999997643211   11   1122233222  2 5799999999999999997


Q ss_pred             CCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      +...+ .|.++++....+.++++.+.+.+..
T Consensus       236 ~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        236 VSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             cccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence            66655 7888877766778899999998764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.6e-29  Score=225.59  Aligned_cols=243  Identities=19%  Similarity=0.203  Sum_probs=180.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc--ccc----hhc---C-C-C-CceEEEecCCCCH------H
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV--RDL----RLC---G-D-L-GQVLFQPYHPRND------D   79 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~--~~~----~~~---~-~-~-~~~~~~~~Dl~d~------~   79 (303)
                      +|+|||||||||++++++|+++|  ++|++++|+.....  +.+    ...   . . . ++++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999754221  111    000   0 0 0 4799999998753      5


Q ss_pred             HHHHHhcccCEEEEccccCcc-ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCC-----CC
Q psy4233          80 EIRKAIKYSNVVINLIGREFA-TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYY-----IS  147 (303)
Q Consensus        80 ~~~~~~~~~D~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~-----~~  147 (303)
                      .+..+..++|+|||+|+.... .....+.+.|+.++.+++++|.+.++++++++||.++++..      ++.+     ..
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            677777889999999997432 33456778999999999999999999899999999998652      1111     12


Q ss_pred             CCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCCc----hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         148 GGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDK----FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      +.+.|+.+|+.+|.+++..   +++++++||+.+||+...    ....+..++... .....++.......++++++|+|
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC-LALGAYPDSPELTEDLTPVDYVA  239 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH-HHhCCCCCCCccccCcccHHHHH
Confidence            3468999999999998875   899999999999997321    122333333321 11112333333236899999999


Q ss_pred             HHHHHHhcCCCC--CCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         221 AAIVAACKDPDA--AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       221 ~~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++++.++.++..  .+++||+++++++++.|+++.+.+ +|.+...
T Consensus       240 ~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~  284 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKL  284 (367)
T ss_pred             HHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCc
Confidence            999999876543  277999999999999999999999 8887653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=2.1e-29  Score=239.91  Aligned_cols=200  Identities=18%  Similarity=0.149  Sum_probs=165.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+|+|||||||||++++++|+++|++|++++|+.....        ..+++++.+|+.|.+++.++++++|+|||+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------PSSADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            58999999999999999999999999999999743211        1358899999999999999999999999999864


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM  178 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~  178 (303)
                      ..     ..++|+.++.++++++++.+++++|++||.+                   |.++|+++++++++++++||+++
T Consensus        73 ~~-----~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~V  128 (854)
T PRK05865         73 GR-----NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALI  128 (854)
T ss_pred             cc-----hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceE
Confidence            32     5688999999999999999999999999864                   88999999989999999999999


Q ss_pred             eeCCCchhhHHHHHHHhhhcceeeecCC--CceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233         179 YGSGDKFLRYYGHMWRHVFRKLAVYKKG--EETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       179 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  256 (303)
                      |||+..  ..+..+.     ..+.++.|  .+. ++|+|++|+|++++.++++....+++||+++++.+|+.|+++.+.+
T Consensus       129 YGP~~~--~~i~~ll-----~~~v~~~G~~~~~-~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~  200 (854)
T PRK05865        129 FGRNVD--NWVQRLF-----ALPVLPAGYADRV-VQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGR  200 (854)
T ss_pred             eCCChH--HHHHHHh-----cCceeccCCCCce-EeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhh
Confidence            999632  1222211     23333333  334 7999999999999999875444466999999999999999999987


Q ss_pred             Hh
Q psy4233         257 VM  258 (303)
Q Consensus       257 ~~  258 (303)
                      ..
T Consensus       201 ~~  202 (854)
T PRK05865        201 PM  202 (854)
T ss_pred             hh
Confidence            54

>PLN02778 3,5-epimerase/4-reductase

Probab=99.97  E-value=9.5e-29  Score=214.13  Aligned_cols=210  Identities=15%  Similarity=0.119  Sum_probs=158.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      ..|+||||||+||||++|+++|+++|++|+...                       .|+.|.+.+...+.  ++|+|||+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~~~~D~ViH~   64 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDAVKPTHVFNA   64 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHhcCCCEEEEC
Confidence            357999999999999999999999999987532                       12345566666665  58999999


Q ss_pred             cccCc-------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------------CCCC-CCCCCCchhH
Q psy4233          95 IGREF-------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------------PPTY-YISGGSQFYR  154 (303)
Q Consensus        95 a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~-~~~~~~~y~~  154 (303)
                      |+...       ...+...+++|+.++.+|+++|++.+++ ++++||.++|+.            .|+. |..+.++|+.
T Consensus        65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~  143 (298)
T PLN02778         65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSK  143 (298)
T ss_pred             CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHH
Confidence            99642       2356788999999999999999999985 566676666542            1222 3234589999


Q ss_pred             HHHHHHHHHHhhCCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         155 TKYQGEKEVLREFPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       155 ~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      +|+++|.+++.+. +..++|+++.+|++... ...+..++  ....+...+      .++++++|++++++.+++++.  
T Consensus       144 sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~--~~~~~~~~~------~s~~yv~D~v~al~~~l~~~~--  212 (298)
T PLN02778        144 TKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKIT--RYEKVVNIP------NSMTILDELLPISIEMAKRNL--  212 (298)
T ss_pred             HHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHH--cCCCeeEcC------CCCEEHHHHHHHHHHHHhCCC--
Confidence            9999999998864 57789998888875332 22332222  222333221      368999999999999997543  


Q ss_pred             CcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         234 GKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       234 g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +++||+++++.+|+.|+++.+++.+|..
T Consensus       213 ~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        213 TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            3499999999999999999999999964

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.97  E-value=7.8e-29  Score=213.95  Aligned_cols=211  Identities=13%  Similarity=0.081  Sum_probs=163.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh------cc-cCEEE
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI------KY-SNVVI   92 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~-~D~vi   92 (303)
                      +|+||||||++|++++++|+++|++|++++|++.+..        ..+++.+.+|+.|++++..++      ++ +|+|+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence            5899999999999999999999999999999865321        135788899999999999998      57 99999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-CCCEE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEAT  171 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-~~~~~  171 (303)
                      |+++....         ......+++++|+++|++|||++||..++..            ...+...|+++++. +++++
T Consensus        73 ~~~~~~~~---------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------~~~~~~~~~~l~~~~gi~~t  131 (285)
T TIGR03649        73 LVAPPIPD---------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------GPAMGQVHAHLDSLGGVEYT  131 (285)
T ss_pred             EeCCCCCC---------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------CchHHHHHHHHHhccCCCEE
Confidence            99874321         1234568999999999999999998766431            11344567888886 99999


Q ss_pred             EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHH
Q psy4233         172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL  251 (303)
Q Consensus       172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~  251 (303)
                      ++||+++|++....  .....+  ......+.+.+... ++||+++|+|++++.++.++...++.|++.+++.+|+.|++
T Consensus       132 ilRp~~f~~~~~~~--~~~~~~--~~~~~~~~~~g~~~-~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia  206 (285)
T TIGR03649       132 VLRPTWFMENFSEE--FHVEAI--RKENKIYSATGDGK-IPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVA  206 (285)
T ss_pred             EEeccHHhhhhccc--cccccc--ccCCeEEecCCCCc-cCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHH
Confidence            99999998653111  011111  11122234455555 79999999999999999876666779999999999999999


Q ss_pred             HHHHHHhcCCCCC
Q psy4233         252 DWFHVVMKKGEPD  264 (303)
Q Consensus       252 ~~i~~~~g~~~~~  264 (303)
                      +.+.+.+|++...
T Consensus       207 ~~l~~~~g~~v~~  219 (285)
T TIGR03649       207 EILSRVLGRKITH  219 (285)
T ss_pred             HHHHHHhCCceEE
Confidence            9999999998764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.96  E-value=4.6e-29  Score=209.19  Aligned_cols=229  Identities=18%  Similarity=0.144  Sum_probs=174.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc---CCCCce----EEEecCCCCHHHHHHHhc--ccCE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC---GDLGQV----LFQPYHPRNDDEIRKAIK--YSNV   90 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~---~~~~~~----~~~~~Dl~d~~~~~~~~~--~~D~   90 (303)
                      ||||||+|.||+.|+++|++.+ .++++++|++.+........   ...+++    ..+.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 68999999865433222221   111233    456899999999999999  7999


Q ss_pred             EEEcccc----CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          91 VINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        91 vi~~a~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      |||+|+.    ..+.+|.+..++|+.++.|++++|.+++++++|++||..+.        +|.+.||.+|+.+|.++...
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv--------~PtnvmGatKrlaE~l~~~~  152 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV--------NPTNVMGATKRLAEKLVQAA  152 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS--------S--SHHHHHHHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC--------CCCcHHHHHHHHHHHHHHHH
Confidence            9999996    45678899999999999999999999999999999999886        57799999999999999886


Q ss_pred             C-------CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         167 F-------PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       167 ~-------~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      +       ..++++|+|+|.|...+....+...++ .++++.+-.  .+..+-|+++++.++.++.++... ..|++|.+
T Consensus       153 ~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~-~g~PlTvT~--p~mtRffmti~EAv~Lvl~a~~~~-~~geifvl  228 (293)
T PF02719_consen  153 NQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIK-NGGPLTVTD--PDMTRFFMTIEEAVQLVLQAAALA-KGGEIFVL  228 (293)
T ss_dssp             CCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHH-TTSSEEECE--TT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE
T ss_pred             hhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHH-cCCcceeCC--CCcEEEEecHHHHHHHHHHHHhhC-CCCcEEEe
Confidence            3       589999999999988877777777666 556666543  333367999999999999998754 34889999


Q ss_pred             eCCcccCHHHHHHHHHHHhcCC
Q psy4233         240 VGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       240 ~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      .-|+++++.|+++.+.+..|..
T Consensus       229 ~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  229 DMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             ---TCEECCCHHHHHHHHTT-E
T ss_pred             cCCCCcCHHHHHHHHHhhcccc
Confidence            9999999999999999999854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=8.9e-28  Score=213.68  Aligned_cols=233  Identities=17%  Similarity=0.129  Sum_probs=198.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      .++++||||||+|-||+++++++++.+ .+++.++|++.+-........   ...++.++.+|+.|.+.+..++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            468899999999999999999999987 679999998654322211111   136789999999999999999999  99


Q ss_pred             EEEEcccc----CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          90 VVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        90 ~vi~~a~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      +|||+|+.    ..+.+|.+..+.|+.||+|++++|.+.+++++|++||..+-        +|.|.||.+|+.+|.++.+
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV--------~PtNvmGaTKr~aE~~~~a  399 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV--------NPTNVMGATKRLAEKLFQA  399 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc--------CCchHhhHHHHHHHHHHHH
Confidence            99999995    56789999999999999999999999999999999998776        5789999999999999887


Q ss_pred             h-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEE
Q psy4233         166 E-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ  238 (303)
Q Consensus       166 ~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~  238 (303)
                      .       +..++.+|.|+|.|...+-...+...++ +++++++-  ..+.-+-|.++.|.++.++.+... ...|++|.
T Consensus       400 ~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~-~GgplTvT--dp~mtRyfMTI~EAv~LVlqA~a~-~~gGeifv  475 (588)
T COG1086         400 ANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIA-EGGPLTVT--DPDMTRFFMTIPEAVQLVLQAGAI-AKGGEIFV  475 (588)
T ss_pred             HhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHH-cCCCcccc--CCCceeEEEEHHHHHHHHHHHHhh-cCCCcEEE
Confidence            5       2689999999999999888888888777 56666654  233336799999999999999885 34588999


Q ss_pred             EeCCcccCHHHHHHHHHHHhcC
Q psy4233         239 AVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       239 i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      +..|+++++.|+++.+.+..|.
T Consensus       476 ldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         476 LDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             EcCCCCeEHHHHHHHHHHHhCC
Confidence            9999999999999999999984

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.96  E-value=2.6e-27  Score=200.69  Aligned_cols=224  Identities=17%  Similarity=0.143  Sum_probs=166.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHh-cccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAI-KYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~-~~~D~vi~   93 (303)
                      ..+|+|+||||||+||++++++|+++|++|++++|+.........   ...+++++.+|+.| .+.+.+.+ .++|+|||
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~   91 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVIC   91 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence            457899999999999999999999999999999997543222111   12468999999998 46777777 68999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCC-------CCchhHHHHHHHHHHHhh
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISG-------GSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~-------~~~y~~~K~~~e~~~~~~  166 (303)
                      +++......+....++|..++.++++++++.+++++|++||.++|+.....+..+       ...|...|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            9886432233334577888999999999999999999999999987543322221       122345788999999999


Q ss_pred             CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC---c
Q psy4233         167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP---K  243 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~---~  243 (303)
                      +++++++||++++++...            + .+... .+......+|+.+|+|++++.++..+...+.++.+.+.   .
T Consensus       172 gi~~~iirpg~~~~~~~~------------~-~~~~~-~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPT------------G-NIVME-PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCC------------c-eEEEC-CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            999999999999976321            0 11111 11111135799999999999999877766778888873   2


Q ss_pred             ccCHHHHHHHHHH
Q psy4233         244 RYLLSELLDWFHV  256 (303)
Q Consensus       244 ~~s~~e~~~~i~~  256 (303)
                      ..++.+++..+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            3788888888765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.95  E-value=7.7e-27  Score=188.40  Aligned_cols=179  Identities=23%  Similarity=0.322  Sum_probs=145.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCcc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFA  100 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~  100 (303)
                      |+|+||||++|+.++++|+++|++|++++|++.+..+       .++++++.+|+.|++++.++++++|+||++++....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999998654333       367999999999999999999999999999986543


Q ss_pred             ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----CCCCCchhHHHHHHHHHHHhhCCCEEEEeec
Q psy4233         101 TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----ISGGSQFYRTKYQGEKEVLREFPEATIFRPS  176 (303)
Q Consensus       101 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~  176 (303)
                               +...++++++++++.+++++|++|+.+++.......    ......|...|..+|+.++..+++|+++||+
T Consensus        74 ---------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~  144 (183)
T PF13460_consen   74 ---------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPG  144 (183)
T ss_dssp             ---------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEES
T ss_pred             ---------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECc
Confidence                     166788999999999999999999999998643310    0112468899999999999999999999999


Q ss_pred             ceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       177 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+||+.......             ....+... .++|+.+|+|++++.++++
T Consensus       145 ~~~~~~~~~~~~-------------~~~~~~~~-~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  145 WIYGNPSRSYRL-------------IKEGGPQG-VNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EEEBTTSSSEEE-------------ESSTSTTS-HCEEEHHHHHHHHHHHHH-
T ss_pred             EeEeCCCcceeE-------------EeccCCCC-cCcCCHHHHHHHHHHHhCC
Confidence            999986431111             11123333 6899999999999999864

...

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=9e-27  Score=215.54  Aligned_cols=243  Identities=17%  Similarity=0.191  Sum_probs=179.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCccc--ccch-h-------------cC------CCCceEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDV--RDLR-L-------------CG------DLGQVLF   70 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~--~~~~-~-------------~~------~~~~~~~   70 (303)
                      ..+++|||||||||||++|++.|++.+   .+|++++|......  +.+. .             .+      ...++++
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            468899999999999999999999865   37899999654321  1110 0             01      1357999


Q ss_pred             EecCCCCH------HHHHHHhcccCEEEEccccCc-cccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCC
Q psy4233          71 QPYHPRND------DEIRKAIKYSNVVINLIGREF-ATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPP  142 (303)
Q Consensus        71 ~~~Dl~d~------~~~~~~~~~~D~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~  142 (303)
                      +.+|+.++      +....+.+++|+|||+|+... ...+....++|+.++.+++++|++.+ ++++||+||..+|+...
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~  276 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ  276 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence            99999986      455666677999999999754 34566789999999999999998864 78999999999987632


Q ss_pred             ------CCC----------------------------------------------------------CCCCCchhHHHHH
Q psy4233         143 ------TYY----------------------------------------------------------ISGGSQFYRTKYQ  158 (303)
Q Consensus       143 ------~~~----------------------------------------------------------~~~~~~y~~~K~~  158 (303)
                            ..|                                                          ..-.+.|..+|..
T Consensus       277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l  356 (605)
T PLN02503        277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM  356 (605)
T ss_pred             CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence                  111                                                          0002789999999


Q ss_pred             HHHHHHhh--CCCEEEEeecce----------eeCCCchhhHHHHHHHhhhccee-eecCCCceeeCceeHHHHHHHHHH
Q psy4233         159 GEKEVLRE--FPEATIFRPSDM----------YGSGDKFLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       159 ~e~~~~~~--~~~~~ilrp~~~----------~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|+++.+.  ++|++|+||+.|          ++++...........  ..+.++ +++++... .|.|++|.++++++.
T Consensus       357 AE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~--g~G~lr~~~~~~~~~-~DiVPVD~vvna~i~  433 (605)
T PLN02503        357 GEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY--GKGQLTGFLADPNGV-LDVVPADMVVNATLA  433 (605)
T ss_pred             HHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe--eccceeEEEeCCCee-EeEEeecHHHHHHHH
Confidence            99999986  699999999999          444432222222111  223333 55555555 899999999999999


Q ss_pred             HhcC----CCCCCcEEEEeCC--cccCHHHHHHHHHHHhcCC
Q psy4233         226 ACKD----PDAAGKIYQAVGP--KRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       226 ~~~~----~~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~  261 (303)
                      ++..    ....+++||++++  .++++.++.+.+.+.+.+.
T Consensus       434 a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~  475 (605)
T PLN02503        434 AMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS  475 (605)
T ss_pred             HHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence            8431    1224789999988  8899999999999877653

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=4.2e-26  Score=213.38  Aligned_cols=200  Identities=15%  Similarity=0.155  Sum_probs=155.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ||||||||+||||++++++|+++|++|++++|.+....        .++++++.+|+.|+. +.+++.++|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC
Confidence            58999999999999999999999999999998643211        135899999999985 778888999999999864


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM  178 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~  178 (303)
                      ...    ...+|+.++.|++++|++.++ ++||+||..  +.+        ..|.    .+|.++..++++++++|++++
T Consensus        72 ~~~----~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~~--------~~~~----~aE~ll~~~~~p~~ILR~~nV  132 (699)
T PRK12320         72 TSA----PGGVGITGLAHVANAAARAGA-RLLFVSQAA--GRP--------ELYR----QAETLVSTGWAPSLVIRIAPP  132 (699)
T ss_pred             ccc----hhhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CCC--------cccc----HHHHHHHhcCCCEEEEeCcee
Confidence            221    235799999999999999998 799999863  321        1232    478888888899999999999


Q ss_pred             eeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233         179 YGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       179 ~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  256 (303)
                      |||+...  ...+..++.....        .+. ..++|++|++++++.+++.+. .| +||+++++.+|+.|+++.+..
T Consensus       133 YGp~~~~~~~r~I~~~l~~~~~--------~~p-I~vIyVdDvv~alv~al~~~~-~G-iyNIG~~~~~Si~el~~~i~~  201 (699)
T PRK12320        133 VGRQLDWMVCRTVATLLRSKVS--------ARP-IRVLHLDDLVRFLVLALNTDR-NG-VVDLATPDTTNVVTAWRLLRS  201 (699)
T ss_pred             cCCCCcccHhHHHHHHHHHHHc--------CCc-eEEEEHHHHHHHHHHHHhCCC-CC-EEEEeCCCeeEHHHHHHHHHH
Confidence            9996542  2334444332111        122 346899999999999997533 34 999999999999999998876


Q ss_pred             H
Q psy4233         257 V  257 (303)
Q Consensus       257 ~  257 (303)
                      .
T Consensus       202 ~  202 (699)
T PRK12320        202 V  202 (699)
T ss_pred             h
Confidence            6

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.94  E-value=1.3e-25  Score=204.28  Aligned_cols=231  Identities=18%  Similarity=0.136  Sum_probs=168.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--------cC--CCCceEEEecCCCCHHHHHHHh
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--------CG--DLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--------~~--~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      .++++|+||||+|+||++++++|+++|++|++++|+..........        .+  ...+++++.+|+.|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            3567899999999999999999999999999999975443221110        01  0135889999999999999999


Q ss_pred             cccCEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-CCCCCCCCCchhHHHHHHHHH
Q psy4233          86 KYSNVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        86 ~~~D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      .++|+|||++|....  ......+++|+.++.++++++++.+++|||++||.++.... ..........|..+|..+|++
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~  237 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA  237 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence            999999999986422  12345678899999999999999999999999999874211 111122345677899999999


Q ss_pred             HHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeC
Q psy4233         163 VLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVG  241 (303)
Q Consensus       163 ~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~  241 (303)
                      +...|++|++||||+++++.+....        . ..+.....+... ...+..+|||+++++++.++. ..+++|.+.+
T Consensus       238 L~~sGIrvTIVRPG~L~tp~d~~~~--------t-~~v~~~~~d~~~-gr~isreDVA~vVvfLasd~~as~~kvvevi~  307 (576)
T PLN03209        238 LIASGLPYTIVRPGGMERPTDAYKE--------T-HNLTLSEEDTLF-GGQVSNLQVAELMACMAKNRRLSYCKVVEVIA  307 (576)
T ss_pred             HHHcCCCEEEEECCeecCCcccccc--------c-cceeeccccccC-CCccCHHHHHHHHHHHHcCchhccceEEEEEe
Confidence            9999999999999999987544210        0 111111111111 235899999999999998654 5788999998


Q ss_pred             CcccCHHHHHHHHHH
Q psy4233         242 PKRYLLSELLDWFHV  256 (303)
Q Consensus       242 ~~~~s~~e~~~~i~~  256 (303)
                      +.......+.+.+..
T Consensus       308 ~~~~p~~~~~~~~~~  322 (576)
T PLN03209        308 ETTAPLTPMEELLAK  322 (576)
T ss_pred             CCCCCCCCHHHHHHh
Confidence            865444555555543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.94  E-value=5.3e-26  Score=192.23  Aligned_cols=200  Identities=19%  Similarity=0.199  Sum_probs=123.6

Q ss_pred             EEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcc--cccc----h---hc--C---CCCceEEEecCCCCH------HH
Q psy4233          23 VFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYD--VRDL----R---LC--G---DLGQVLFQPYHPRND------DE   80 (303)
Q Consensus        23 VtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~--~~~~----~---~~--~---~~~~~~~~~~Dl~d~------~~   80 (303)
                      |||||||+|.+|+++|++++.  +|+|++|.....  .+.+    .   .+  .   ...+++++.||++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999976432  1111    1   00  0   157899999999874      56


Q ss_pred             HHHHhcccCEEEEccccCccc-cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC---------------
Q psy4233          81 IRKAIKYSNVVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY---------------  144 (303)
Q Consensus        81 ~~~~~~~~D~vi~~a~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~---------------  144 (303)
                      +..+.+++|+|||||+..... ......+.|+.+++++++.|.+.+.++|+|+||..+.+.....               
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            777778899999999975443 4456889999999999999998777799999995554432211               


Q ss_pred             CCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeC-CCc---hhhHHHHHHHh--hhccee-eecCCCceeeCc
Q psy4233         145 YISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGS-GDK---FLRYYGHMWRH--VFRKLA-VYKKGEETIKQP  213 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~-~~~---~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~  213 (303)
                      .....++|.++|+.+|+++++.    +++++|+|||.++|. ..+   ....+..++..  ..+.+| ..+..... .++
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~d~  239 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR-LDL  239 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT---E
T ss_pred             hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce-EeE
Confidence            1233578999999999999875    899999999999993 221   11112222221  334444 33333334 899


Q ss_pred             eeHHHHHHHH
Q psy4233         214 VYVGDVAAAI  223 (303)
Q Consensus       214 i~~~Dva~~~  223 (303)
                      +++|.+|++|
T Consensus       240 vPVD~va~aI  249 (249)
T PF07993_consen  240 VPVDYVARAI  249 (249)
T ss_dssp             EEHHHHHHHH
T ss_pred             ECHHHHHhhC
Confidence            9999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.94  E-value=3.1e-26  Score=191.93  Aligned_cols=224  Identities=18%  Similarity=0.153  Sum_probs=164.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREF   99 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~   99 (303)
                      |+|+||||.+|+++++.|++.+++|++++|+..+.. +.++.    .+++++.+|+.|.+++.++|+++|+||++.+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA----LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc----ccceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence            799999999999999999999999999999874322 22222    3588999999999999999999999999988643


Q ss_pred             cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeeccee
Q psy4233         100 ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY  179 (303)
Q Consensus       100 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~  179 (303)
                      .        .......+++++|+++|+++||+.|....+.....  ..|..++...|...|+++++.+++|+++|||.++
T Consensus        77 ~--------~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~--~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~  146 (233)
T PF05368_consen   77 P--------SELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG--SEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFM  146 (233)
T ss_dssp             C--------CHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT--STTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEH
T ss_pred             h--------hhhhhhhhHHHhhhccccceEEEEEeccccccccc--ccccchhhhhhhhhhhhhhhccccceeccccchh
Confidence            1        12445668999999999999997666555532111  1223456678999999999999999999999887


Q ss_pred             eCCCchhhHHHHHHHhh--hcceeeecCCCceeeCc-eeHHHHHHHHHHHhcCCCCC--CcEEEEeCCcccCHHHHHHHH
Q psy4233         180 GSGDKFLRYYGHMWRHV--FRKLAVYKKGEETIKQP-VYVGDVAAAIVAACKDPDAA--GKIYQAVGPKRYLLSELLDWF  254 (303)
Q Consensus       180 G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-i~~~Dva~~~~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i  254 (303)
                      ...   ...+.......  ...+.+++++... ..+ ++.+|+|++++.++.++...  ++.+.+++ +.+|+.|+++.+
T Consensus       147 e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~  221 (233)
T PF05368_consen  147 ENL---LPPFAPVVDIKKSKDVVTLPGPGNQK-AVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAIL  221 (233)
T ss_dssp             HHH---HTTTHHTTCSCCTSSEEEEETTSTSE-EEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHH
T ss_pred             hhh---hhhhcccccccccceEEEEccCCCcc-ccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHH
Confidence            431   12111111111  1246677777654 445 59999999999999886543  55666654 889999999999


Q ss_pred             HHHhcCCCC
Q psy4233         255 HVVMKKGEP  263 (303)
Q Consensus       255 ~~~~g~~~~  263 (303)
                      ++.+|+++.
T Consensus       222 s~~~G~~v~  230 (233)
T PF05368_consen  222 SKVLGKKVK  230 (233)
T ss_dssp             HHHHTSEEE
T ss_pred             HHHHCCccE
Confidence            999999854

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1431|consensus

Probab=99.94  E-value=5.8e-25  Score=173.36  Aligned_cols=254  Identities=15%  Similarity=0.144  Sum_probs=188.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~   93 (303)
                      ++||||||++|.+|++|.+.+.+.|.  +-.++.-+                   -.+||++.++.+++|+.  +..|||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------ccccccchHHHHHHHhccCCceeee
Confidence            57999999999999999999999875  22222221                   25789999999999976  899999


Q ss_pred             ccccC-----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----------CCC-CCchhHHHH
Q psy4233          94 LIGRE-----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----------ISG-GSQFYRTKY  157 (303)
Q Consensus        94 ~a~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----------~~~-~~~y~~~K~  157 (303)
                      +|+..     ....+.++...|+....|+++.|.+.|++|+|++.|.+.|.+..+.|          +.| ...|+.+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            99752     33566789999999999999999999999999999999998743332          223 346888997


Q ss_pred             HHHH----HHHhhCCCEEEEeecceeeCCCchh----hHHHHHHHh-------hhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         158 QGEK----EVLREFPEATIFRPSDMYGSGDKFL----RYYGHMWRH-------VFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       158 ~~e~----~~~~~~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .+.-    |..++|..++.+-|.++|||.+++.    ..++.+++.       ....+.++|+|... ++|+|++|+|++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~Pl-RqFiys~DLA~l  220 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPL-RQFIYSDDLADL  220 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChH-HHHhhHhHHHHH
Confidence            6654    4444589999999999999976531    222222222       22378899999998 899999999999


Q ss_pred             HHHHhcCCCCCCcEEEEeCCc--ccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         223 IVAACKDPDAAGKIYQAVGPK--RYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       223 ~~~~~~~~~~~g~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      +++++.+-.. -+..+++.++  .+|++|+++++.++++-...+ |+-...+-. ...-...+.|..++|.+.+
T Consensus       221 ~i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq-~kKtasnsKL~sl~pd~~f  292 (315)
T KOG1431|consen  221 FIWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQ-FKKTASNSKLRSLLPDFKF  292 (315)
T ss_pred             HHHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCC-cccccchHHHHHhCCCccc
Confidence            9999986433 3467777777  799999999999999987775 443333332 2222333456666665444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.93  E-value=1.8e-24  Score=207.16  Aligned_cols=208  Identities=15%  Similarity=0.134  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      ..||||||||+||||++|++.|.++|++|...                       .+|++|.+.+...+.  ++|+||||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih~  435 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------KGRLEDRSSLLADIRNVKPTHVFNA  435 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------ccccccHHHHHHHHHhhCCCEEEEC
Confidence            35799999999999999999999999887311                       134678888888776  59999999


Q ss_pred             cccCc-------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------------CCCCCCCC-CCchhH
Q psy4233          95 IGREF-------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------------PPTYYISG-GSQFYR  154 (303)
Q Consensus        95 a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~~~~~-~~~y~~  154 (303)
                      |+...       ...+...+++|+.++.+|+++|++.++ ++|++||..+|+.            .|+.++.+ .++|+.
T Consensus       436 Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~  514 (668)
T PLN02260        436 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSK  514 (668)
T ss_pred             CcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhH
Confidence            98642       235678899999999999999999998 5777888777642            12333333 489999


Q ss_pred             HHHHHHHHHHhhCCCEEEEeecceeeCC-CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         155 TKYQGEKEVLREFPEATIFRPSDMYGSG-DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       155 ~K~~~e~~~~~~~~~~~ilrp~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      +|+++|++++.+ .++.++|+.++||.+ ....+++..+++ ....+.+.       .+..+++|++.+++.++..+ . 
T Consensus       515 sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~-~~~~~~vp-------~~~~~~~~~~~~~~~l~~~~-~-  583 (668)
T PLN02260        515 TKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISR-YNKVVNIP-------NSMTVLDELLPISIEMAKRN-L-  583 (668)
T ss_pred             HHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhc-cceeeccC-------CCceehhhHHHHHHHHHHhC-C-
Confidence            999999999887 477889999999743 122233444443 22222221       34677889999988888742 2 


Q ss_pred             CcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         234 GKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       234 g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      +++||+++++.+|+.|+++.|++.++
T Consensus       584 ~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        584 RGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             CceEEecCCCcCcHHHHHHHHHHhcC
Confidence            46999999999999999999999884

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.93  E-value=1.6e-24  Score=223.26  Aligned_cols=244  Identities=17%  Similarity=0.163  Sum_probs=179.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccc--cchh---------cCCCCceEEEecCCCC----
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVR--DLRL---------CGDLGQVLFQPYHPRN----   77 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~--~~~~---------~~~~~~~~~~~~Dl~d----   77 (303)
                      ..++|+|||||||+|++++++|++++    ++|+++.|.......  .+..         .....+++++.+|+.+    
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999887    899999997543211  1100         0012469999999974    


Q ss_pred             --HHHHHHHhcccCEEEEccccCccccch-hhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------------
Q psy4233          78 --DDEIRKAIKYSNVVINLIGREFATKNF-TIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------------  141 (303)
Q Consensus        78 --~~~~~~~~~~~D~vi~~a~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------------  141 (303)
                        .+.+..+..++|+|||+|+......+. .+...|+.++.+++++|.+.++++++|+||.++++..             
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence              466777778899999999975543333 4456799999999999999999999999999887421             


Q ss_pred             -----CCC-----CCCCCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCCch----hhHHHHHHHhhhcceeeec
Q psy4233         142 -----PTY-----YISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDKF----LRYYGHMWRHVFRKLAVYK  204 (303)
Q Consensus       142 -----~~~-----~~~~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~~~~~~~~~~  204 (303)
                           +..     +..+.+.|+.+|+.+|.++...   +++++++||+.+||+....    ...+..++.. ......++
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~-~~~~~~~p 1208 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKG-CIQLGLIP 1208 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHH-HHHhCCcC
Confidence                 111     1123467999999999998774   7999999999999985431    2233333321 11223333


Q ss_pred             CCCceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         205 KGEETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       205 ~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      .+... ++|++++|+|++++.++.++.  ..+.+||+.++..+++.++++.+.+ +|.+.+
T Consensus      1209 ~~~~~-~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~ 1267 (1389)
T TIGR03443      1209 NINNT-VNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVE 1267 (1389)
T ss_pred             CCCCc-cccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCC
Confidence            44445 799999999999999987653  2346899999999999999999976 466554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=5.1e-24  Score=173.74  Aligned_cols=243  Identities=14%  Similarity=0.009  Sum_probs=187.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-c--cchhcCCC--CceEEEecCCCCHHHHHHHhcc--cCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-R--DLRLCGDL--GQVLFQPYHPRNDDEIRKAIKY--SNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~--~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~--~D~   90 (303)
                      +++.||||-||+-|++|++.|+++||+|.++.|+..... .  .+...+..  ++++++.+|++|...+.++++.  +|.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            678999999999999999999999999999999743322 2  12222222  4488999999999999999886  899


Q ss_pred             EEEccccC----ccccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCC------CCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGRE----FATKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPN------PPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~  158 (303)
                      |+|+|+++    +++.|....+++-.++.+|+++.+..+.  .||...||...||.      .|.+|..|.+||+.+|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            99999974    4567888999999999999999998764  38999999888885      577899999999999999


Q ss_pred             HHHHHHh----hCCCEEEEeecceeeCCCc--h-hhHHHHH---HHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         159 GEKEVLR----EFPEATIFRPSDMYGSGDK--F-LRYYGHM---WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       159 ~e~~~~~----~~~~~~ilrp~~~~G~~~~--~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      +-.+...    +|+-.+.-+..+--+|..+  | ...+...   ++.........|+-+-. +||-|..|.+++++.+++
T Consensus       162 a~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAk-RDWG~A~DYVe~mwlmLQ  240 (345)
T COG1089         162 AYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAK-RDWGHAKDYVEAMWLMLQ  240 (345)
T ss_pred             HHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccc-ccccchHHHHHHHHHHHc
Confidence            9886654    4666665555554455332  2 1112211   11122233344444445 999999999999999999


Q ss_pred             CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++.  ...|.++.+++.|.+|+++...+..|....
T Consensus       241 q~~--PddyViATg~t~sVrefv~~Af~~~g~~l~  273 (345)
T COG1089         241 QEE--PDDYVIATGETHSVREFVELAFEMVGIDLE  273 (345)
T ss_pred             cCC--CCceEEecCceeeHHHHHHHHHHHcCceEE
Confidence            865  558999999999999999999999995433

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.92  E-value=2.1e-24  Score=184.20  Aligned_cols=234  Identities=19%  Similarity=0.155  Sum_probs=164.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc-----------CCCCceEEEecCCC------CHHH
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC-----------GDLGQVLFQPYHPR------NDDE   80 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~------d~~~   80 (303)
                      ++||+||||||+|.+++++|+.+- .+|+|++|..++....-++.           ....+++++.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999876 59999999866432221111           12367999999998      4577


Q ss_pred             HHHHhcccCEEEEccccC-ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC--------C--CC----
Q psy4233          81 IRKAIKYSNVVINLIGRE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP--------T--YY----  145 (303)
Q Consensus        81 ~~~~~~~~D~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~--------~--~~----  145 (303)
                      +..+.+.+|.|||+++.. ...........|+.++..+++.|...+.|.+.|+||+++.+...        +  .|    
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            888888899999999974 45666789999999999999999999999999999999965421        1  01    


Q ss_pred             -CCCCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCC-c---hhhHHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233         146 -ISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGD-K---FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       146 -~~~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~-~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~  215 (303)
                       ....++|++||+.+|..+++.   |++++|+|||++.|+.. +   ...++.++...  .-+.+|..   ... .+.+.
T Consensus       161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~---~~~-~~~~p  236 (382)
T COG3320         161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS---EYS-LDMLP  236 (382)
T ss_pred             cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc---ccc-hhhCc
Confidence             123589999999999999986   79999999999999744 1   12222233322  23333321   222 33344


Q ss_pred             HHHHHH-----------HHHHHhcCCCCCCcEEE-EeCCcccCHHHHHHHHHH
Q psy4233         216 VGDVAA-----------AIVAACKDPDAAGKIYQ-AVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       216 ~~Dva~-----------~~~~~~~~~~~~g~~~~-i~~~~~~s~~e~~~~i~~  256 (303)
                      ++.+++           ++..+..++...-+.|+ ...|..+...++.+++.+
T Consensus       237 ~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         237 VDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             cceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            333333           33333322222122444 344788999999999988

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=3.7e-23  Score=174.63  Aligned_cols=216  Identities=16%  Similarity=0.123  Sum_probs=157.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||||+||++++++|+++|++|+++.|+.....+....  .....+++++.+|+.|.+++.++++      
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            35578999999999999999999999999998888875543222211  1112458899999999998887764      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||++|....        ......+++|+.++.++++++    ++.+.+++|++||...+...     .....|+
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----~~~~~y~  157 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----PGRSNYA  157 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----CCchHHH
Confidence             47999999995322        123467788999999988887    55677899999998887432     3356899


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+++.       .+++++++||+.++++........ .... .....       .. ..+++.+|+++++..+
T Consensus       158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~-~~~~~-------~~-~~~~~~~dva~~~~~~  227 (249)
T PRK12825        158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE-AREA-KDAET-------PL-GRSGTPEDIARAVAFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch-hHHh-hhccC-------CC-CCCcCHHHHHHHHHHH
Confidence            999988877654       379999999999999864322111 1110 10011       11 3489999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCccc
Q psy4233         227 CKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++++  ...|+.|+++++..+
T Consensus       228 ~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        228 CSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             hCccccCcCCCEEEeCCCEee
Confidence            9764  346899999988654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9e-24  Score=181.54  Aligned_cols=226  Identities=17%  Similarity=0.127  Sum_probs=163.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      .+++|||||+|+||++++++|+++|++|++++|+.... +.+... ...+++++.+|++|.+++.++++       ++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-DDLKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999975322 221111 12468999999999998887664       3799


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |||++|....        ......+++|+.++.++++++    ++.+.+++|++||.+....     ..+.+.|+.+|+.
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a  154 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----YPGFSLYHATKWG  154 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----CCCCchhHHHHHH
Confidence            9999986422        122457789999999999997    5566779999999776431     2345789999999


Q ss_pred             HHHHHHh-------hCCCEEEEeecce---eeCCCchh---h-----HHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         159 GEKEVLR-------EFPEATIFRPSDM---YGSGDKFL---R-----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       159 ~e~~~~~-------~~~~~~ilrp~~~---~G~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      .|.+++.       ++++++++|||.+   ||++....   .     ....+.+.       ...+..  .-+.+++|++
T Consensus       155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~d~~~~~  225 (276)
T PRK06482        155 IEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRA-------LADGSF--AIPGDPQKMV  225 (276)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHH-------HhhccC--CCCCCHHHHH
Confidence            9987764       3789999999988   55432110   0     00011110       001111  1246899999


Q ss_pred             HHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         221 AAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       221 ~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ++++.++.++.. +..|++++++..+..|+++.+.+.++.
T Consensus       226 ~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        226 QAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALEA  264 (276)
T ss_pred             HHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence            999999986544 557999999888888888888777754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=3.6e-23  Score=176.37  Aligned_cols=221  Identities=13%  Similarity=0.023  Sum_probs=155.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      ++++++|||||+|+||++++++|+++|++|+++.|++....+..... ....++.++++|++|.+.+.+++++       
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999764322221111 1123578899999999988876653       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcch----HHHHHHHH-HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEI----PARLARLS-KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||++|....        ...+..+++|+.+    +.++++++ +..+.+++|++||...+..     ..+...|+.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~y~~  159 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----SPLKSAYVT  159 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----CCCCcccHH
Confidence            8999999996432        1233567789998    66677777 6667789999999766542     134578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-----hhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-----VFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +|...+.+++..       +++++++||+.+++|....  .+......     ......+++.+... .+|++++|++++
T Consensus       160 sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a  236 (262)
T PRK13394        160 AKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK--QIPEQAKELGISEEEVVKKVMLGKTVD-GVFTTVEDVAQT  236 (262)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh--hhHhhhhccCCChHHHHHHHHhcCCCC-CCCCCHHHHHHH
Confidence            999998877653       6899999999999885321  11111100     00001122223333 689999999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++.++....  ..|+.|++.++..
T Consensus       237 ~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        237 VLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHcCccccCCcCCEEeeCCcee
Confidence            999997543  2478898887643

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.9e-23  Score=175.06  Aligned_cols=234  Identities=16%  Similarity=0.090  Sum_probs=166.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +|++++++||||+|+||+++++.|+++|++|++++|+.........   ......++.++.+|+.|++++.++++     
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999987543221111   11112468889999999998887765     


Q ss_pred             --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        ++|++||++|....         ......+++|+.++.++++++.+.    +..+++++||...+..     ..+.+.
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~  158 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----HRWFGA  158 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----CCCCcc
Confidence              57999999985311         123457788999999998876543    3358999999887642     133578


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...|.+++..       +++++++|||.+.++...................       .. ..+++++|+|++++
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~dva~~~~  230 (276)
T PRK05875        159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT-------PL-PRVGEVEDVANLAM  230 (276)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC-------CC-CCCcCHHHHHHHHH
Confidence            999999999988764       5889999999988764321110001100000011       11 34688999999999


Q ss_pred             HHhcCCCC--CCcEEEEeCCccc----CHHHHHHHHHHHhcCC
Q psy4233         225 AACKDPDA--AGKIYQAVGPKRY----LLSELLDWFHVVMKKG  261 (303)
Q Consensus       225 ~~~~~~~~--~g~~~~i~~~~~~----s~~e~~~~i~~~~g~~  261 (303)
                      ++++++..  .|+++++++++.+    +..|+++.+.+..|..
T Consensus       231 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  273 (276)
T PRK05875        231 FLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR  273 (276)
T ss_pred             HHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence            99986543  4889999998876    8888888887766554

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.91  E-value=3.4e-22  Score=171.45  Aligned_cols=222  Identities=22%  Similarity=0.238  Sum_probs=173.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+||||||||++|++++++|+++|++|++++|++.......      .++++..+|+.++..+...+++.|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            58999999999999999999999999999999865433322      469999999999999999999999999998865


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeec
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS  176 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~  176 (303)
                      . ... ........   ++++.+++.  ++++++++|......       .....|..+|..+|+.+.+.+++++++|+.
T Consensus        75 ~-~~~-~~~~~~~~---~~~~~a~~a~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~  142 (275)
T COG0702          75 D-GSD-AFRAVQVT---AVVRAAEAAGAGVKHGVSLSVLGADA-------ASPSALARAKAAVEAALRSSGIPYTTLRRA  142 (275)
T ss_pred             c-ccc-chhHHHHH---HHHHHHHHhcCCceEEEEeccCCCCC-------CCccHHHHHHHHHHHHHHhcCCCeEEEecC
Confidence            4 322 23333333   344455543  477999999888766       345799999999999999999999999977


Q ss_pred             ceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233         177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       177 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  256 (303)
                      .+|.......  .. ..  .....+....+... .+++..+|++.++...+..+...+++|.+.+++..+..++++.+..
T Consensus       143 ~~~~~~~~~~--~~-~~--~~~~~~~~~~~~~~-~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~  216 (275)
T COG0702         143 AFYLGAGAAF--IE-AA--EAAGLPVIPRGIGR-LSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDY  216 (275)
T ss_pred             eeeeccchhH--HH-HH--HhhCCceecCCCCc-eeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHH
Confidence            7775433322  11 11  22232333323333 7899999999999999998777788999999999999999999999


Q ss_pred             HhcCCCCC
Q psy4233         257 VMKKGEPD  264 (303)
Q Consensus       257 ~~g~~~~~  264 (303)
                      ..|++..+
T Consensus       217 ~~gr~~~~  224 (275)
T COG0702         217 TIGRPVGL  224 (275)
T ss_pred             HhCCccee
Confidence            99999873

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-23  Score=173.35  Aligned_cols=220  Identities=15%  Similarity=0.134  Sum_probs=154.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.+.  +.....++.++.+|++|++++..+++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999987543222111  11112357889999999999887765       


Q ss_pred             ccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233          87 YSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        87 ~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      ++|+|||+++...  ...+...+++|+.++.++++++...-  ..++|++||..........+.....+|+.+|..+|.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~  163 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDA  163 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHH
Confidence            4899999998532  22355678899999999999998642  2489999996553211111112256899999999998


Q ss_pred             HHhh-------CCCEEEEeecceeeCCCchh-h-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         163 VLRE-------FPEATIFRPSDMYGSGDKFL-R-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       163 ~~~~-------~~~~~ilrp~~~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      ++..       ++++++++|+.+-+|..... . ......  .....+       . ..+++++|+|++++.+++.+...
T Consensus       164 ~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~~~dva~~~~~l~~~~~~~  233 (248)
T PRK07806        164 LRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI--EARREA-------A-GKLYTVSEFAAEVARAVTAPVPS  233 (248)
T ss_pred             HHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH--HHHHhh-------h-cccCCHHHHHHHHHHHhhccccC
Confidence            8774       57888888887665521100 0 000000  000111       1 36899999999999999976668


Q ss_pred             CcEEEEeCCccc
Q psy4233         234 GKIYQAVGPKRY  245 (303)
Q Consensus       234 g~~~~i~~~~~~  245 (303)
                      |++|++.+++..
T Consensus       234 g~~~~i~~~~~~  245 (248)
T PRK07806        234 GHIEYVGGADYF  245 (248)
T ss_pred             ccEEEecCccce
Confidence            999999988753

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-23  Score=179.69  Aligned_cols=227  Identities=12%  Similarity=0.047  Sum_probs=163.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      ++++|+||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++++|++|.+++.++++       ++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999754322111111  2358889999999988877654       479


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||++|....        +..+..+++|+.++..+++++    ++.+.+++|++||...+...     .....|+.+|.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~~~~~Y~~sKa  154 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF-----PMSGIYHASKW  154 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC-----CCccHHHHHHH
Confidence            99999996422        234567889999988877775    55667799999998776532     23468999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCch-------hhHHHHHHHhhhcceeeecCCCceeeCc-eeHHHHHHH
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKF-------LRYYGHMWRHVFRKLAVYKKGEETIKQP-VYVGDVAAA  222 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~Dva~~  222 (303)
                      ..+.+.+.       .+++++++|||.+..+....       ......+.......       ... ..+ ++.+|+|++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~p~dva~~  226 (275)
T PRK08263        155 ALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ-------WSE-RSVDGDPEAAAEA  226 (275)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH-------HHh-ccCCCCHHHHHHH
Confidence            98877654       37999999999887654310       01111110000001       111 345 899999999


Q ss_pred             HHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         223 IVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       223 ~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      ++.+++.+...+..|+..+++.+++.++.+.+.+..
T Consensus       227 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        227 LLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             HHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            999999776666555555567899999999988864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.90  E-value=1.9e-22  Score=170.70  Aligned_cols=216  Identities=14%  Similarity=0.085  Sum_probs=155.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++|+||||+|++|.+++++|+++|++|++++|+......... ......+++++.+|+.|.+++.+.++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999997543222111 11112458899999999998888775       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+++....        ...+..++.|+.++.++++++.    +.+.+++|++||...+..    +......|+.+
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----~~~~~~~y~~s  159 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----GYPGLAHYAAS  159 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----CCCCccHHHHH
Confidence            8999999986432        2234578899999999998873    455679999999887621    12345689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |..++.+++..       +++++++||+.++||........ .+........++        ..+++++|+|++++.++.
T Consensus       160 K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~  230 (251)
T PRK12826        160 KAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA-QWAEAIAAAIPL--------GRLGEPEDIAAAVLFLAS  230 (251)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch-HHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhC
Confidence            99988877663       68999999999999854321110 000001111221        257999999999999887


Q ss_pred             CCC--CCCcEEEEeCCcc
Q psy4233         229 DPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~~  244 (303)
                      ...  ..|++|++.+|..
T Consensus       231 ~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        231 DEARYITGQTLPVDGGAT  248 (251)
T ss_pred             ccccCcCCcEEEECCCcc
Confidence            542  3688999987653

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=4e-22  Score=168.53  Aligned_cols=215  Identities=14%  Similarity=0.137  Sum_probs=151.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcC-CCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCG-DLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++|+||||+|+||++++++|+++|++|++++|+..+..+...  ... ....++++.+|++|.+++..+++      
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            455799999999999999999999999999999987543322211  111 11358899999999999888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|+|||++|....        ...+..+++|+.++.++++++...   ....++.+++....     .|..+...|+.
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~  158 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE-----RPLKGYPVYCA  158 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc-----CCCCCchhHHH
Confidence             37999999985321        223568889999999999998642   12356666654332     24456789999


Q ss_pred             HHHHHHHHHHhh------CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE------FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|..+|.+++.+      +++++++||+.++||....  .......   .....++        ..+.+++|+|++++.+
T Consensus       159 sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~d~a~~~~~~  227 (249)
T PRK09135        159 AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQA---ILARTPL--------KRIGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHH---HHhcCCc--------CCCcCHHHHHHHHHHH
Confidence            999999988764      4789999999999987532  1111111   1111111        1234689999999776


Q ss_pred             hcCC-CCCCcEEEEeCCcccC
Q psy4233         227 CKDP-DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~-~~~g~~~~i~~~~~~s  246 (303)
                      +.+. ...|++|++++++.++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            6543 3468899999988765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-22  Score=170.41  Aligned_cols=220  Identities=13%  Similarity=0.062  Sum_probs=151.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++|+||||+|+||++++++|+++|++|++++|++......... .....+++++.+|+.|.+++.++++       .
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4567999999999999999999999999999999975433221111 1112468899999999999887765       4


Q ss_pred             cCEEEEccccCccc--------cchhhhhhhcchHH----HHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFAT--------KNFTIADANVEIPA----RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~----~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+++.....        .....+++|+.++.    .++.++++.+.++||++||...+..     ....+.|+.+
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----~~~~~~y~~~  156 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----SAGKAAYVSA  156 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----CCCcchhHHH
Confidence            79999999863221        12345678888844    4555555667889999999866542     2446789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhh-----cceeeecCCCceeeCceeHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVF-----RKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      |...+.+.+..       +++++++||+.+++|....  .+........     .....+...... ..+++++|+|+++
T Consensus       157 k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~  233 (258)
T PRK12429        157 KHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKERGISEEEVLEDVLLPLVPQ-KRFTTVEEIADYA  233 (258)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccccCCChHHHHHHHHhccCCc-cccCCHHHHHHHH
Confidence            99888777643       6889999999999875321  1111100000     000011112223 5799999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCc
Q psy4233         224 VAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +.++....  ..|+.|++.++-
T Consensus       234 ~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        234 LFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHcCccccCccCCeEEeCCCE
Confidence            99987533  357889888764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=7.1e-22  Score=166.57  Aligned_cols=215  Identities=15%  Similarity=0.111  Sum_probs=154.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      .|++++|+||||+|++|++++++|+++|++|++++|++........ ......+++++.+|+.|++++.+++++      
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4566899999999999999999999999999999997543221111 111124588999999999988777654      


Q ss_pred             -cCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 -SNVVINLIGREFAT--------KNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 -~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       +|+|||++|.....        .....++.|+.++.++++++.    +.+.+++|++||......     ..+...|+.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----~~~~~~y~~  156 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----NPGQTNYSA  156 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----CCCCcHhHh
Confidence             59999999863321        224567889999999988884    556789999999865432     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+++..       +++++++||+.++++.........  .......++       . ..+++.+|+|++++.++
T Consensus       157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~--~~~~~~~~~-------~-~~~~~~~dva~~~~~~~  226 (246)
T PRK05653        157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV--KAEILKEIP-------L-GRLGQPEEVANAVAFLA  226 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH--HHHHHhcCC-------C-CCCcCHHHHHHHHHHHc
Confidence            999887776653       689999999999988654211111  110111122       1 45799999999999999


Q ss_pred             cCC--CCCCcEEEEeCCcc
Q psy4233         228 KDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~  244 (303)
                      ...  ...|+.|++++|.-
T Consensus       227 ~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        227 SDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             CchhcCccCCEEEeCCCee
Confidence            753  33688999988763

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=6.1e-22  Score=168.18  Aligned_cols=218  Identities=16%  Similarity=0.106  Sum_probs=155.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++|.+++..++++       
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999997543222111111 123588899999999988887753       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        +..+..+++|+.++.++++++.+.    +.+++|++||.....     +......|+.+
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~~~y~~s  162 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----ARPGIAPYTAT  162 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----CCCCCccHHHH
Confidence            7999999986422        122456779999999999988643    567999999976543     22345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++..       ++++.+++|+.+.++..........+........+       . ..+...+|+|++++.++.
T Consensus       163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~  234 (255)
T PRK07523        163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP-------A-GRWGKVEELVGACVFLAS  234 (255)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcC
Confidence            99999887753       68999999999998753211000111110111222       1 346889999999999997


Q ss_pred             CCC--CCCcEEEEeCCcccC
Q psy4233         229 DPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~~~s  246 (303)
                      .+.  ..|+.+++.++..+|
T Consensus       235 ~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        235 DASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             chhcCccCcEEEECCCeecc
Confidence            532  368899998887655

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.4e-22  Score=168.70  Aligned_cols=225  Identities=12%  Similarity=0.006  Sum_probs=160.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~   90 (303)
                      +++++||||+|+||.++++.|+++|++|++++|+....... .......+++++.+|+.|.+++..++.+       +|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF-ADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999975432211 1111123588999999999998877653       799


Q ss_pred             EEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |||++|.....        .......+|+.++.++++++    .+.+..++|++||......      .....|+.+|..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------~~~~~y~~sK~a  154 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------LGHPAYSAAKAG  154 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC------CCCcccHHHHHH
Confidence            99999863221        11234668899888888877    3345568999999755431      123579999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+.+++.+       +++++.++||.++++.... ......+.......       ... .++++++|++++++.++...
T Consensus       155 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~d~a~~~~~l~~~~  226 (257)
T PRK07074        155 LIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW-------YPL-QDFATPDDVANAVLFLASPA  226 (257)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc-------CCC-CCCCCHHHHHHHHHHHcCch
Confidence            99887764       5889999999998874321 00001111100001       112 57899999999999999642


Q ss_pred             --CCCCcEEEEeCCcccCHHHHHHHHHHH
Q psy4233         231 --DAAGKIYQAVGPKRYLLSELLDWFHVV  257 (303)
Q Consensus       231 --~~~g~~~~i~~~~~~s~~e~~~~i~~~  257 (303)
                        ...|+.+++.++...+..|+++.+.+.
T Consensus       227 ~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        227 ARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             hcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence              335888899999989999999887653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.89  E-value=6.4e-22  Score=167.90  Aligned_cols=217  Identities=18%  Similarity=0.135  Sum_probs=150.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------cccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------KYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------~~~D   89 (303)
                      ++++|||||+|+||++++++|+++|++|++++|+........... ....+++++.+|+.|.+++..++       .++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            368999999999999999999999999999999754322111111 11245889999999999665544       4479


Q ss_pred             EEEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||+++.....        ..+..+..|+.++..+++++    ++.+++++|++||...+...     .....|+.+|.
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----~~~~~y~~sk~  155 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS-----PFKSAYVAAKH  155 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-----CCCchhHHHHH
Confidence            999999864321        12345678888887777776    56677899999998665431     23478999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhccee-------eecCCCceeeCceeHHHHHHHH
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA-------VYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      ..+.+++..       +++++++||+.+++|...  ..+.....  ....+       ....+... .++++++|+|+++
T Consensus       156 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~  230 (255)
T TIGR01963       156 GLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE--KQIADQAK--TRGIPEEQVIREVMLPGQPT-KRFVTVDEVAETA  230 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH--HHHHhhhc--ccCCCchHHHHHHHHccCcc-ccCcCHHHHHHHH
Confidence            988877643       689999999999987422  11111110  00110       01122333 5799999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCcc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +.++.+.  ...|+.|++.++..
T Consensus       231 ~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       231 LFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHcCccccCccceEEEEcCccc
Confidence            9999763  23577899987653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.89  E-value=4.6e-22  Score=169.14  Aligned_cols=223  Identities=11%  Similarity=-0.006  Sum_probs=156.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+...........  ..+++++.+|++|.+++.++++       .+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45679999999999999999999999999999998754322211111  1358899999999998887765       47


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC-----CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG-----VEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |++||+++....        ...+..+++|+.++.++++++....     -.++|++||......     ..+...|+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~s  156 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-----EALVSHYCAT  156 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-----CCCCchhhhh
Confidence            999999986321        2334678899999999999986431     248999999754321     1345789999


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchh-hHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+.       .+++++.++||.++++..... ..+...... .......++.+... ..+++.+|+|++++.+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  235 (257)
T PRK07067        157 KAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGMALFL  235 (257)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCC-CCccCHHHHHHHHHHH
Confidence            9998888764       368999999999998743211 111110000 00001112222223 5789999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCcccC
Q psy4233         227 CKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      +....  ..|++|++.+|+.+|
T Consensus       236 ~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        236 ASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             hCcccccccCcEEeecCCEeCC
Confidence            97543  368899998887553

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.2e-21  Score=164.19  Aligned_cols=215  Identities=13%  Similarity=0.079  Sum_probs=154.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+........... ....++.++.+|++|.+++..+++       
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999754321111111 112357889999999988877664       


Q ss_pred             ccCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 YSNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ~~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                      .+|+|||++|....           ......+++|+.++.++++++...    +.+++|++||..++.        +.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------~~~~  154 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------YSNF  154 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------Cccc
Confidence            47999999996321           122356789999999999988753    346999999988864        3478


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...|.+++..       ++.+++++||.+..+....... ..+.....+..+.        .-+.+.+|+|++++
T Consensus       155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~d~a~~~~  225 (250)
T PRK07774        155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPL--------SRMGTPEDLVGMCL  225 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence            999999999887764       5789999999988775431110 0111111112221        12567899999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCcccC
Q psy4233         225 AACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      .++....  ..|++|++.+++.++
T Consensus       226 ~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        226 FLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHhChhhhCcCCCEEEECCCeecc
Confidence            9987532  368899999887654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4e-21  Score=163.90  Aligned_cols=220  Identities=13%  Similarity=0.077  Sum_probs=150.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      ++.+++|||||+|+||++++++|+++|++|++++|+.....+....... .+++++.+|+.|++++.++++       ++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-AKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999974432221111111 157899999999998877664       58


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCC-ceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGV-EKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      |+|||++|....         ......++.|+.++.++++++    +..+. ++++++||......     ......|+.
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-----~~~~~~y~~  162 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-----YPGRTPYAA  162 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-----CCCCchhHH
Confidence            999999996411         123567889999999988877    33444 57888887654321     123467999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceee----ecCCCceeeCceeHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV----YKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +|...|.+++..       +++++++|||++++|....  ...............    ....... ..+++++|+|+++
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~  239 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR--VIEARAQQLGIGLDEMEQEYLEKISL-GRMVEPEDIAATA  239 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH--HhhhhhhccCCChhHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            999999887663       6899999999999885431  111100000000000    0000111 3589999999999


Q ss_pred             HHHhcC--CCCCCcEEEEeCCcc
Q psy4233         224 VAACKD--PDAAGKIYQAVGPKR  244 (303)
Q Consensus       224 ~~~~~~--~~~~g~~~~i~~~~~  244 (303)
                      +.++..  ....|+.|++.++..
T Consensus       240 ~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        240 LFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHcCccccCccCcEEEeCCCcc
Confidence            998864  233688999988764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.88  E-value=3.3e-21  Score=164.12  Aligned_cols=212  Identities=14%  Similarity=0.126  Sum_probs=145.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+... .+... ......++.++.+|++|.+++.++++       +
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999986421 11111 11112357889999999888776654       4


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....         ......+++|+.++..+++    .+++.+..+||++||...++       ....+|+.
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------~~~~~Y~~  157 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-------INRVPYSA  157 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-------CCCCccHH
Confidence            7999999984211         1223456778777665544    44455667999999988764       23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-----------hHHHHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-----------RYYGHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      +|...+.+++..       +++++.++||.+++|.....           ..+..+........++        .-+.+.
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  229 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM--------KRYGTI  229 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc--------ccCCCH
Confidence            999999888763       68999999999998742110           0011111111111111        235689


Q ss_pred             HHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         217 GDVAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +|+|++++.++..+.  ..|+.+++.+++
T Consensus       230 ~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        230 DEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            999999999987542  368899997765

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-21  Score=162.50  Aligned_cols=206  Identities=15%  Similarity=0.106  Sum_probs=151.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+...... ...++++.+|+.|.+++..+++       ++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP-ADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHh-hcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            457899999999999999999999999999999997644322221111 1347888999999988877665       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||+++....        ......++.|+.++.++++++.    +.+.+++|++||...+...     .+...|+.+|
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~y~~sk  158 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----PGMGAYAAAK  158 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----CCcchhHHHH
Confidence            999999986321        1123457789999999888774    4567899999999887632     3346899999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+++.       .++++..+|||.++++....             ..+.    ... ..+++.+|+|++++.++.+
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~-------------~~~~----~~~-~~~~~~~dva~~~~~~l~~  220 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA-------------DMPD----ADF-SRWVTPEQIAAVIAFLLSD  220 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh-------------cCCc----hhh-hcCCCHHHHHHHHHHHhCc
Confidence            988877754       26899999999999873221             0000    111 3479999999999999985


Q ss_pred             CC--CCCcEEEEeCCccc
Q psy4233         230 PD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       230 ~~--~~g~~~~i~~~~~~  245 (303)
                      ..  ..|+.+.+.+++..
T Consensus       221 ~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        221 EAQAITGASIPVDGGVAL  238 (239)
T ss_pred             ccccccceEEEecCCEeC
Confidence            42  35888888887643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.9e-21  Score=164.82  Aligned_cols=219  Identities=12%  Similarity=0.050  Sum_probs=153.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|++..|+....... .. ......++..+.+|+++++++..+++      
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999998877654322211 11 11111357788999999988877655      


Q ss_pred             -ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       ++|+|||++|.....        ..+..+++|+.+..++++++.+.  ...++|++||...+.     +..+.+.|+.+
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~s  157 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----PAYGLSIYGAM  157 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----CCCCchHHHHH
Confidence             479999999962211        11356789999999999888753  225899999988765     23456789999


Q ss_pred             HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHH-HHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...|.+++.+      ++.+.+++||.+.++.......+... .....+...      .. ..+++++|+|++++.+++
T Consensus       158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~dva~~~~~~~~  230 (252)
T PRK06077        158 KAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT------LM-GKILDPEEVAEFVAAILK  230 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcC------cC-CCCCCHHHHHHHHHHHhC
Confidence            99999888764      57888999999987632211000000 000001111      11 368999999999999998


Q ss_pred             CCCCCCcEEEEeCCccc
Q psy4233         229 DPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       229 ~~~~~g~~~~i~~~~~~  245 (303)
                      .....|++|++.+++.+
T Consensus       231 ~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        231 IESITGQVFVLDSGESL  247 (252)
T ss_pred             ccccCCCeEEecCCeec
Confidence            66667889999988653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=5.5e-21  Score=161.76  Aligned_cols=217  Identities=13%  Similarity=0.075  Sum_probs=151.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+.+++++||||+|+||.+++++|+++|++|++++|+...............++.++.+|+.|++++..+++       .
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            356789999999999999999999999999999999864332221111112358899999999999987765       3


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||++|....         ...+..+++|+.++..+.+.+.    +.+.++||++||...+..     ..+...|+.
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~y~~  156 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-----RPGLGWYNA  156 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-----CCCchHHHH
Confidence            6999999986322         1234578888888777776665    356679999999887652     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH--HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY--YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+++..       +++++.++||.+.++.......  ...........       ... ..+++++|+|.+++.
T Consensus       157 sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~dva~~~~~  228 (251)
T PRK07231        157 SKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT-------IPL-GRLGTPEDIANAALF  228 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC-------CCC-CCCcCHHHHHHHHHH
Confidence            999988877653       6899999999997664221100  00000000011       111 357899999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCcc
Q psy4233         226 ACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++..+.  ..|..+.+.++..
T Consensus       229 l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        229 LASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             HhCccccCCCCCeEEECCCcc
Confidence            997543  2577788876643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=8.7e-21  Score=161.13  Aligned_cols=213  Identities=15%  Similarity=0.040  Sum_probs=151.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhc-CCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||++++++|+++|++|++++|+........ ... ....++.++.+|++|++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999999998754321111 111 112358899999999988776654       47


Q ss_pred             CEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHhc-----C-----CceEEEEecCccCCCCCCCCCCC
Q psy4233          89 NVVINLIGREFA----------TKNFTIADANVEIPARLARLSKEM-----G-----VEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        89 D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                      |+|||++|....          ...+..+++|+.++.++++++...     +     ..++|++||......     ..+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~  156 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-----SPN  156 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-----CCC
Confidence            999999986321          233457889999999998887542     1     457999999876542     134


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ...|+.+|...|.+++..       ++++++++||.+.++.... ...+....  .....+       . ..+.+.+|+|
T Consensus       157 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~~~d~a  226 (256)
T PRK12745        157 RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALI--AKGLVP-------M-PRWGEPEDVA  226 (256)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhh--hhcCCC-------c-CCCcCHHHHH
Confidence            578999999999877653       6899999999999875321 11111111  111111       1 3578999999


Q ss_pred             HHHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233         221 AAIVAACKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       221 ~~~~~~~~~~~--~~g~~~~i~~~~~~  245 (303)
                      +++..++....  ..|+.|++.++...
T Consensus       227 ~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        227 RAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHhCCcccccCCCEEEECCCeec
Confidence            99999886432  35889999887543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.1e-21  Score=166.15  Aligned_cols=220  Identities=16%  Similarity=0.128  Sum_probs=151.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      |++++++||||+|++|+++++.|+++|++|++++|+.........   ......+++++.+|++|++++.+ ++      
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            346789999999999999999999999999999997543222111   11112468999999999988765 42      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||++|....        ......+++|+.++.++++++    ++.+..++|++||......     ..+...|+
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~Y~  154 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----FPGLSPYV  154 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----CCCCchhH
Confidence             37999999986332        122356778999988888875    5666779999999755432     13457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-----------hHHHHHHHhhhcceeeecCCCceeeCcee
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-----------RYYGHMWRHVFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (303)
                      .+|...+.+++..       +++++++|||.+++|.....           ..+..........+.     ... ..+++
T Consensus       155 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~  228 (280)
T PRK06914        155 SSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHIN-----SGS-DTFGN  228 (280)
T ss_pred             HhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHh-----hhh-hccCC
Confidence            9999999877653       79999999999988732100           000001000000000     111 35789


Q ss_pred             HHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHH
Q psy4233         216 VGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~  248 (303)
                      ++|+|++++.+++++... ..|++.++..+++.
T Consensus       229 ~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        229 PIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             HHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence            999999999999976554 47888776665544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1e-20  Score=160.52  Aligned_cols=214  Identities=17%  Similarity=0.153  Sum_probs=149.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+||||+|+||++++++|+++|++|+++ .|+......... ......+++++.+|++|++++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999875 454322111111 11112358899999999999887766       


Q ss_pred             ------ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ------YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ------~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                            ++|+|||++|.....        ..+..+++|+.++.++++++...  ...++|++||..++..     .....
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~-----~~~~~  158 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG-----FTGSI  158 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC-----CCCCc
Confidence                  489999999863221        11356779999999999988753  3358999999888652     23457


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+++..       ++++++++||.+++|.......-..........       ... ..+++++|+|+++
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~dva~~~  230 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-------SVF-GRIGQVEDIADAV  230 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc-------CCc-CCCCCHHHHHHHH
Confidence            8999999999876542       689999999999887432110000000000001       111 3567999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCC
Q psy4233         224 VAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~  242 (303)
                      ..++.++.  ..|++|++.++
T Consensus       231 ~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        231 AFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHcCcccCCcCCCEEEeCCC
Confidence            98887543  25889999766

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=4.7e-21  Score=162.20  Aligned_cols=216  Identities=16%  Similarity=0.091  Sum_probs=149.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      |++++++||||+|+||+++++.|+++|++|+++ .|+.....+... ......++.++.+|++|++++..+++       
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346799999999999999999999999998764 665432211111 11112458899999999998887765       


Q ss_pred             ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      .+|+|||++|.....        .....+++|+.++.++++++..    .+.++||++||...+..     ..+...|+.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~y~~  156 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----LENYTTVGV  156 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----CCCccHHHH
Confidence            379999999863221        1123567899999888888864    34569999999766532     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...|.+++..       +++++.++||.+..+...................+       . ..+++.+|+|++++.++
T Consensus       157 sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~~~  228 (250)
T PRK08063        157 SKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP-------A-GRMVEPEDVANAVLFLC  228 (250)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC-------C-CCCcCHHHHHHHHHHHc
Confidence            999999988763       68999999999987642211111111110111111       1 34799999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcc
Q psy4233         228 KDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~  244 (303)
                      ..+.  ..|+.+++.++..
T Consensus       229 ~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        229 SPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             CchhcCccCCEEEECCCee
Confidence            7543  3588898887764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.9e-21  Score=164.14  Aligned_cols=215  Identities=14%  Similarity=0.111  Sum_probs=147.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      ++++|+||||+|+||++++++|+++|++|++++|+..... .+... ...++..+.+|++|.+++.++++       ++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999999754322 11111 12358889999999998887766       379


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||+||....        ......+++|+.++.++++++    ++.+.+++|++||......     ..+...|+.+|.
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----~~~~~~Y~~sK~  155 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----MPGIGYYCGSKF  155 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----CCCcchhHHHHH
Confidence            99999996322        112356889999999999985    3445669999999877642     134578999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCc--------hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDK--------FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|.+++.       .+++++++|||.+.++...        ....+......... ....   ... ..+.+++|+|++
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~~~~dva~~  230 (277)
T PRK06180        156 ALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQ-AREA---KSG-KQPGDPAKAAQA  230 (277)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHH-HHHh---hcc-CCCCCHHHHHHH
Confidence            99887765       3799999999999875321        01111111100000 0000   011 346789999999


Q ss_pred             HHHHhcCCCCCCcEEEEeCCccc
Q psy4233         223 IVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       223 ~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      ++.++..+.. ...| +.+++..
T Consensus       231 ~~~~l~~~~~-~~~~-~~g~~~~  251 (277)
T PRK06180        231 ILAAVESDEP-PLHL-LLGSDAL  251 (277)
T ss_pred             HHHHHcCCCC-CeeE-eccHHHH
Confidence            9999986544 3234 4444443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.87  E-value=1.1e-20  Score=144.86  Aligned_cols=202  Identities=14%  Similarity=0.106  Sum_probs=155.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |||.|+||||.+|++|+++++.+||+|++++|++.+....       +++..++.|+.|++.+.+.+.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            7999999999999999999999999999999986543332       458899999999999999999999999998876


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCCCCCCCCchhHHHHHHH--HHHHhh-CCCE
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTYYISGGSQFYRTKYQGE--KEVLRE-FPEA  170 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~~~~~~~~y~~~K~~~e--~~~~~~-~~~~  170 (303)
                      ........    ......|++.++++++.|++.++..+...-.     .+.|.-|...|..++..+|  +.++.. .++|
T Consensus        74 ~~~~~~~~----~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W  149 (211)
T COG2910          74 ASDNDELH----SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW  149 (211)
T ss_pred             CCChhHHH----HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence            44333323    2336689999999999999999988875433     2345556667777888887  455553 6999


Q ss_pred             EEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEe
Q psy4233         171 TIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV  240 (303)
Q Consensus       171 ~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~  240 (303)
                      +.+-|+.++.|+.+...+.      .++...+.+...   -++|+..|.|-+++..++++....+.|.+.
T Consensus       150 TfvSPaa~f~PGerTg~yr------lggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         150 TFVSPAAFFEPGERTGNYR------LGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EEeCcHHhcCCccccCceE------eccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            9999999999976543331      334444443322   256999999999999999888777777653

>PLN02253 xanthoxin dehydrogenase

Probab=99.87  E-value=1.5e-20  Score=161.83  Aligned_cols=227  Identities=14%  Similarity=0.057  Sum_probs=153.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ..+++++++||||+|+||++++++|+++|++|++++|+.....+.........+++++++|++|.+++.++++       
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3456789999999999999999999999999999988643322211111222468999999999999888775       


Q ss_pred             ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccC-CCCCCCCCCCCCc
Q psy4233          87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNAD-PNPPTYYISGGSQ  151 (303)
Q Consensus        87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~-~~~~~~~~~~~~~  151 (303)
                      ++|+|||+||....          +..+..+++|+.++.++++++..    .+..++|++||.... +.      .....
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~  167 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------LGPHA  167 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC------CCCcc
Confidence            58999999986321          22356899999999998887753    233478998887653 32      22358


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch---h-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF---L-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      |+.+|...|.+.+..       ++.+..++||.+.++....   . ......+...   ..............++.+|+|
T Consensus       168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~dva  244 (280)
T PLN02253        168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGF---RAFAGKNANLKGVELTVDDVA  244 (280)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhh---HHHhhcCCCCcCCCCCHHHHH
Confidence            999999999988763       6888999999987753210   0 0000000000   000000000002347899999


Q ss_pred             HHHHHHhcCCC--CCCcEEEEeCCcccCHHH
Q psy4233         221 AAIVAACKDPD--AAGKIYQAVGPKRYLLSE  249 (303)
Q Consensus       221 ~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e  249 (303)
                      ++++.++....  ..|+.+++.++...+..+
T Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        245 NAVLFLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             HHHHhhcCcccccccCcEEEECCchhhccch
Confidence            99999987532  368889998876554433

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5e-21  Score=162.16  Aligned_cols=218  Identities=13%  Similarity=0.087  Sum_probs=150.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|+++.|+.....+.........++.++++|++|++++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            55789999999999999999999999999999999754332221111112458899999999999887665       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||+++....        ...+..+.+|+.++.++.+++    ++.+.++++++||.......     .....|+.+|
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~~~Y~~sK  157 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----RGRAAYVASK  157 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----CCccHHHHHH
Confidence            999999996322        122345788999887666654    55667799999998664321     3357899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+++..       ++++++++||.++++....  .+..... ......... .......+++.+|+|++++.++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~d~a~~~~~l~~~  233 (252)
T PRK06138        158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR--IFARHAD-PEALREALR-ARHPMNRFGTAEEVAQAALFLASD  233 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh--hhccccC-hHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999887764       6899999999999874321  0000000 000000000 011112478999999999999986


Q ss_pred             CCC--CCcEEEEeCC
Q psy4233         230 PDA--AGKIYQAVGP  242 (303)
Q Consensus       230 ~~~--~g~~~~i~~~  242 (303)
                      +..  .|..+.+.++
T Consensus       234 ~~~~~~g~~~~~~~g  248 (252)
T PRK06138        234 ESSFATGTTLVVDGG  248 (252)
T ss_pred             hhcCccCCEEEECCC
Confidence            432  5777777655

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=2.2e-20  Score=157.61  Aligned_cols=214  Identities=16%  Similarity=0.153  Sum_probs=149.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++++||||||++|+++++.|+++|++|+++.|+........ . ......++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999988888754321111 1 11122468899999999998887665      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||++|....        ...+..+..|+.++.++++++..    .+.+++|++||.......     .....|+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-----~~~~~y~  156 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-----PGQANYA  156 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-----CCCchhH
Confidence             47999999986322        12235677899999999888864    345689999997543221     2346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+++..       ++++++++||.+.++.....  ............+       . ..+.+.+|+|+++..+
T Consensus       157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l  226 (248)
T PRK05557        157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIP-------L-GRLGQPEEIASAVAFL  226 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence            9999988766542       68999999998876533211  1111110111111       1 3468999999999998


Q ss_pred             hcC--CCCCCcEEEEeCCc
Q psy4233         227 CKD--PDAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~--~~~~g~~~~i~~~~  243 (303)
                      +..  ....|+.|+++++.
T Consensus       227 ~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        227 ASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             cCcccCCccccEEEecCCc
Confidence            865  33468899998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=162.41  Aligned_cols=231  Identities=11%  Similarity=-0.017  Sum_probs=153.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      +++++++||||+|+||+++++.|+++|++|++.+|+.....+..... ....++.++.+|++|.+++.++++.       
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999998754322211111 1123578899999999988877653       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||+||....        +..+..+++|+.++.++++++.    +.+ ..++|++||...+..     ..+...|+.
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  158 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----NAGLGAYGV  158 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----CCCCchHHH
Confidence            7999999996321        2234567899999999998874    333 358999999887642     244578999


Q ss_pred             HHHHHHHHHH----hh---CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVL----RE---FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~----~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|..++.+.+    +.   ++++++++||.+.++......................+..... .++++++|+|++++.++
T Consensus       159 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        159 AKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQ-DDNLGVDDIAQLTADAI  237 (275)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccccccccccc-ccCCCHHHHHHHHHHHH
Confidence            9997544433    32   7899999999998774321111000000011111222322333 57899999999999999


Q ss_pred             cCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      .++    +.|.+.+  ......+.+.+.+..
T Consensus       238 ~~~----~~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        238 LAN----RLYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HcC----CeEEecC--hhhHHHHHHHHHHHH
Confidence            753    3454543  344455555544443

>PRK06194 hypothetical protein; Provisional

Probab=99.87  E-value=1.1e-20  Score=163.26  Aligned_cols=215  Identities=11%  Similarity=0.008  Sum_probs=145.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      +++++++|||||+|+||++++++|+++|++|++++|+.....+.... .....+++++.+|++|.+++.+++++      
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999999864322211111 11123578899999999999887763      


Q ss_pred             -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCC------ceEEEEecCccCCCCCCCCCCC
Q psy4233          88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGV------EKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~------~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                       +|+|||+||....        ......+++|+.++.+++++    +.+.+.      .++|++||...+...     ..
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~  157 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----PA  157 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----CC
Confidence             7999999997432        22335688999999997777    344433      489999998777532     34


Q ss_pred             CCchhHHHHHHHHHHHhh----C-----CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE----F-----PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~----~-----~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ...|+.+|...+.+++.+    +     +++..+.||.+..+.....         ..+...+.+++.+. ++|++++|.
T Consensus       158 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~  227 (287)
T PRK06194        158 MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE---------RNRPADLANTAPPT-RSQLIAQAM  227 (287)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc---------ccCchhcccCcccc-chhhHHHHH
Confidence            468999999999988753    2     4455666665543311100         22344555555555 677777776


Q ss_pred             HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      +.++....                .++..|+++.+.+.++.
T Consensus       228 ~~~~~~~~----------------~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        228 SQKAVGSG----------------KVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             HHhhhhcc----------------CCCHHHHHHHHHHHHHc
Confidence            66543210                15677777777666543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=1.1e-20  Score=159.57  Aligned_cols=213  Identities=15%  Similarity=0.139  Sum_probs=151.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      +++++++||||+|+||++++++|+++|++|+++.++.....+.. . ......++.++.+|++|.+++.+++++      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            55789999999999999999999999999987665433322211 1 111124588999999999988887765      


Q ss_pred             -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       +|+|||++|....        ......+++|+.++.++++++..    .+..++|++||.......     .+...|+.
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~  158 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----FGQTNYSA  158 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----CCCcchHH
Confidence             7999999996332        23346788999999999998864    334599999997665321     34578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++++++||.+.++......  .........       .... ..+.+++|++++++.++
T Consensus       159 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~-------~~~~-~~~~~~edva~~~~~~~  228 (247)
T PRK12935        159 AKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVA-------KIPK-KRFGQADEIAKGVVYLC  228 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHH-------hCCC-CCCcCHHHHHHHHHHHc
Confidence            999888776553       789999999999865322110  001000000       1122 46899999999999998


Q ss_pred             cCCC-CCCcEEEEeCCc
Q psy4233         228 KDPD-AAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~~-~~g~~~~i~~~~  243 (303)
                      +... ..|+.|++.++.
T Consensus       229 ~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        229 RDGAYITGQQLNINGGL  245 (247)
T ss_pred             CcccCccCCEEEeCCCc
Confidence            7532 468899998774

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-20  Score=158.36  Aligned_cols=210  Identities=13%  Similarity=0.125  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-----hcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-----LCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +++|+++||||+|+||++++++|+++|++|+++.|......+...     ......+++++.+|+.|.+++.+.++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999998764322211111     01112458899999999998887764    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         ++|+|||++|....        ......+++|+.++.++++++.     +.+.+++|++||...+...     .+..
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~  158 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----RGQV  158 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----CCCc
Confidence               48999999996431        1224577899999999999987     4566799999998776421     3457


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+++..       ++++++++||.+.++...........    ....+.        ..+.+.+|+|+++
T Consensus       159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~----~~~~~~--------~~~~~~~~va~~~  226 (249)
T PRK12827        159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHL----LNPVPV--------QRLGEPDEVAALV  226 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHH----HhhCCC--------cCCcCHHHHHHHH
Confidence            8999999888776653       79999999999998754321111111    111111        2246889999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCC
Q psy4233         224 VAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~  242 (303)
                      +.++...  ...|+.+++.++
T Consensus       227 ~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        227 AFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHcCcccCCccCcEEEeCCC
Confidence            9998653  235778888765

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=161.05  Aligned_cols=213  Identities=17%  Similarity=0.107  Sum_probs=148.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +.+++++||||+|+||++++++|+++|++|++++|+.....+... ......+++++.+|++|.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            446799999999999999999999999999999986533211111 11111358889999999999887765       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......+++|+.++.++++++.    +.+..+||++||...+...     .....|+.+
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~s  162 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----PHMGAYGAA  162 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----CCcchHHHH
Confidence            7999999986322        1223456899999999988864    3345689999998777532     234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeC-CCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGS-GDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...|.+++..       +++++++|||.+.++ +.... ........ .   ...++ +... ..+++++|+|++++.+
T Consensus       163 K~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~-~---~~~~~-~~~~-~~~~~~~dva~a~~~~  236 (274)
T PRK07775        163 KAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLE-D---WAKWG-QARH-DYFLRASDLARAITFV  236 (274)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHH-H---HHHhc-cccc-ccccCHHHHHHHHHHH
Confidence            99999988763       789999999987654 22111 11111111 0   00111 1122 4689999999999999


Q ss_pred             hcCCCCCCcEEEEe
Q psy4233         227 CKDPDAAGKIYQAV  240 (303)
Q Consensus       227 ~~~~~~~g~~~~i~  240 (303)
                      ++++. .+.+||+.
T Consensus       237 ~~~~~-~~~~~~~~  249 (274)
T PRK07775        237 AETPR-GAHVVNME  249 (274)
T ss_pred             hcCCC-CCCeeEEe
Confidence            98653 35577774

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.1e-20  Score=157.70  Aligned_cols=211  Identities=17%  Similarity=0.057  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi   92 (303)
                      +++++++||||+|+||+++++.|+++|++|++++|+..... .+...   .+.+++.+|++|.+++.++++.   +|+||
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD-RLAGE---TGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHH---hCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            55689999999999999999999999999999999753322 11111   2367889999999988887764   89999


Q ss_pred             EccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          93 NLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      |++|....        ...+..+.+|+.++.++++++.+.    + ..++|++||...+...     .....|+.+|..+
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~y~~sK~a~  157 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----PDHLAYCASKAAL  157 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----CCCcHhHHHHHHH
Confidence            99986422        123356678999999999888653    2 3589999998776421     3446899999999


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC-
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-  231 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  231 (303)
                      |.+++..       +++++.++|+.++++...................+       . ..+++.+|+|++++.++..+. 
T Consensus       158 ~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        158 DAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIP-------L-GRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHcCcccC
Confidence            9977653       68999999999998753210000000000001111       1 457999999999999997543 


Q ss_pred             -CCCcEEEEeCCc
Q psy4233         232 -AAGKIYQAVGPK  243 (303)
Q Consensus       232 -~~g~~~~i~~~~  243 (303)
                       ..|+.+++.++.
T Consensus       230 ~~~G~~~~~~~g~  242 (245)
T PRK07060        230 MVSGVSLPVDGGY  242 (245)
T ss_pred             CccCcEEeECCCc
Confidence             358888887654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.86  E-value=2.4e-20  Score=157.78  Aligned_cols=214  Identities=14%  Similarity=0.084  Sum_probs=150.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      ++++++||||+|+||++++++|+++|++|++++|+.....+.... .....+++++.+|+.|.+++.++++       ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999875432221111 1112458999999999998887765       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||+++....        ...+..+++|+.++.++++++.    +.+.+++|++||...+...     .....|+.+|
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~-----~~~~~Y~~sK  156 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS-----SGEAVYAACK  156 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC-----CCCchHHHHH
Confidence            999999985321        1223568899999999888774    4566799999999887532     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      ...+.+++..       ++++++++||.++++......    .-..+.......++       . ..+...+|+|+++..
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~  228 (250)
T TIGR03206       157 GGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP-------L-GRLGQPDDLPGAILF  228 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC-------c-cCCcCHHHHHHHHHH
Confidence            8888777653       699999999999987322100    00001110111121       1 235788999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCc
Q psy4233         226 ACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~  243 (303)
                      ++..+.  ..|++++++++.
T Consensus       229 l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       229 FSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HcCcccCCCcCcEEEeCCCc
Confidence            987543  258899997764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06128 oxidoreductase; Provisional

Probab=99.86  E-value=3.7e-20  Score=160.94  Aligned_cols=218  Identities=12%  Similarity=0.087  Sum_probs=154.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccc-hh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDL-RL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~-~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|||||+|+||++++++|+++|++|++..++.... .+.. .. .....++.++.+|++|.+++.++++      
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999998877653221 1111 11 1112357889999999988877664      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|+|||+||....         +.....+++|+.++.++++++...  .-.+||++||...+...     .....|+.
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~a  207 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----PTLLDYAS  207 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----CCchhHHH
Confidence             47999999996321         234568999999999999998753  12489999999887531     23467999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+++..       ++++.+++||.+.+|...................+       . ..+.+.+|+|.+++.++
T Consensus       208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dva~~~~~l~  279 (300)
T PRK06128        208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP-------M-KRPGQPVEMAPLYVLLA  279 (300)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC-------C-CCCcCHHHHHHHHHHHh
Confidence            999999887763       78999999999998853211111111110111112       1 34689999999999998


Q ss_pred             cCCC--CCCcEEEEeCCcccC
Q psy4233         228 KDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ....  ..|+.|++.++..++
T Consensus       280 s~~~~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        280 SQESSYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             CccccCccCcEEeeCCCEeCc
Confidence            7533  268899998886543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.86  E-value=4.1e-20  Score=156.59  Aligned_cols=216  Identities=12%  Similarity=-0.006  Sum_probs=151.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      .+++++++||||+|+||++++++|+++|++|++++|+..      ..  ...+++++++|+.|.+++.+++++       
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL------TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh------hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999751      11  124588999999999998887754       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......+++|+.++.++++++..    .+..++|++||.....     +..+...|+.+
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----~~~~~~~Y~~s  151 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----PRIGMAAYGAS  151 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----CCCCCchhHHH
Confidence            7999999986322        23346788999999999988743    3445899999986653     22345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      |...+.+++..       ++++++++||.+++|.............. ..........+... ..+++++|+|++++.++
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  230 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAVLFLA  230 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHHHHHh
Confidence            99999887653       68999999999998853211000000000 00000000011112 45799999999999999


Q ss_pred             cCC--CCCCcEEEEeCCcc
Q psy4233         228 KDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~  244 (303)
                      ...  ...|++..+.++..
T Consensus       231 ~~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        231 SDLASHITLQDIVVDGGAT  249 (252)
T ss_pred             cchhcCccCcEEEECCCee
Confidence            753  34677777777643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.1e-20  Score=154.80  Aligned_cols=200  Identities=15%  Similarity=0.080  Sum_probs=139.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~   93 (303)
                      +||+++||||+|++|++++++|+++ ++|++++|+..+.. .+..  ..++++++++|+.|.+++.++++   ++|+|||
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~-~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD-ELAA--ELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH-HHHH--HhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4679999999999999999999999 99999999754321 1111  12358899999999999998887   4899999


Q ss_pred             ccccCccc--------cchhhhhhhcchH----HHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHH
Q psy4233          94 LIGREFAT--------KNFTIADANVEIP----ARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        94 ~a~~~~~~--------~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~  161 (303)
                      ++|.....        .....++.|+.+.    .++++++++.+ +++|++||..++...     .+...|+.+|...+.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~-----~~~~~y~~~K~a~~~  151 (227)
T PRK08219         78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRAN-----PGWGSYAASKFALRA  151 (227)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcC-----CCCchHHHHHHHHHH
Confidence            99864321        1234567777774    44555555443 589999998776532     335789999999988


Q ss_pred             HHHhh-----C-CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233         162 EVLRE-----F-PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK  235 (303)
Q Consensus       162 ~~~~~-----~-~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  235 (303)
                      +++..     . +++..++||.+.++....      ........       ... ..+++.+|+|++++.+++++. .+.
T Consensus       152 ~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~------~~~~~~~~-------~~~-~~~~~~~dva~~~~~~l~~~~-~~~  216 (227)
T PRK08219        152 LADALREEEPGNVRVTSVHPGRTDTDMQRG------LVAQEGGE-------YDP-ERYLRPETVAKAVRFAVDAPP-DAH  216 (227)
T ss_pred             HHHHHHHHhcCCceEEEEecCCccchHhhh------hhhhhccc-------cCC-CCCCCHHHHHHHHHHHHcCCC-CCc
Confidence            77653     4 788888888766542211      10001111       111 457999999999999998654 355


Q ss_pred             EEEEeC
Q psy4233         236 IYQAVG  241 (303)
Q Consensus       236 ~~~i~~  241 (303)
                      ++++.-
T Consensus       217 ~~~~~~  222 (227)
T PRK08219        217 ITEVVV  222 (227)
T ss_pred             cceEEE
Confidence            777653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.86  E-value=2.4e-20  Score=158.72  Aligned_cols=219  Identities=13%  Similarity=0.063  Sum_probs=149.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++|+||||+|+||+++++.|+++|++|++++|+.......   +.......+++++.+|++|.+++.+++.       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999875432211   1111111358999999999988876654       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCcc-CCCCCCCCCCCCCchh
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNA-DPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~  153 (303)
                      +|+|||++|....        ......+++|+.++.++++++..    .+ -.++|++||... ++.      .....|+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------~~~~~Y~  155 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------KHNSGYS  155 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------CCCchhH
Confidence            7999999985321        12345678999998877776643    34 358999998654 332      2346899


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhh----hcceeeecCCCceeeCceeHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHV----FRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .+|+..+.+++.       .++++.+++||.++++.... ..+.......    ......+..+... ..+++.+|++++
T Consensus       156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv~~~  233 (259)
T PRK12384        156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQDVLNM  233 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHHHHHH
Confidence            999998777655       36999999999988753221 2222211100    0011112222233 568999999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++.++.+..  ..|+.|++.+++.
T Consensus       234 ~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        234 LLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHcCcccccccCceEEEcCCEE
Confidence            999987542  3688999988764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.86  E-value=3.3e-20  Score=157.52  Aligned_cols=214  Identities=11%  Similarity=0.047  Sum_probs=145.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      +++++|+||||+|+||+++++.|+++|++|+++.|+.....+....   ......+.++.+|+.|++++.+++++     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999875432211111   11123467789999999998887764     


Q ss_pred             --cCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCC-----CCCC
Q psy4233          88 --SNVVINLIGREFA-----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNP-----PTYY  145 (303)
Q Consensus        88 --~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~-----~~~~  145 (303)
                        +|+|||+|+....           ......+++|+.++..+++++    ++.+.+++|++||......+     +..+
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence              7999999974211           122356677777776555544    45566799999997664321     1222


Q ss_pred             CCCCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      ......|+.+|...+.+.+.       .++++++++||.++++...  . +....   ....+       . ..+++.+|
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~--~-~~~~~---~~~~~-------~-~~~~~~~d  227 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE--A-FLNAY---KKCCN-------G-KGMLDPDD  227 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH--H-HHHHH---HhcCC-------c-cCCCCHHH
Confidence            22234799999999988754       2689999999988765321  1 11111   11111       1 34799999


Q ss_pred             HHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         219 VAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       219 va~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +|++++.++.+..  ..|+.+.+.++.
T Consensus       228 va~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        228 ICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hhhhHhheeccccccccCceEEecCCc
Confidence            9999999997542  257777776653

>PRK06182 short chain dehydrogenase; Validated

Probab=99.85  E-value=8.9e-20  Score=156.47  Aligned_cols=209  Identities=16%  Similarity=0.064  Sum_probs=143.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      ++++++||||+|+||++++++|+++|++|++++|+.... +.+..    .+++++.+|++|.+++.++++       ++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999975432 22111    248899999999999888776       589


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchH----HHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIP----ARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||++|....        +..+..+++|+.++    ..++..+++.+..++|++||.......     .....|+.+|.
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sKa  151 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT-----PLGAWYHATKF  151 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC-----CCccHhHHHHH
Confidence            99999996422        23356778888875    445556666777799999997654321     22357999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhh-HH---------HHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLR-YY---------GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ..+.+.+.       .++++++++||.+.+|...... .+         .....   .....+...... ..+.+.+|+|
T Consensus       152 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~vA  227 (273)
T PRK06182        152 ALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQ---AVAASMRSTYGS-GRLSDPSVIA  227 (273)
T ss_pred             HHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHH---HHHHHHHHhhcc-ccCCCHHHHH
Confidence            99987543       3799999999999887432110 00         00000   000000000111 3568999999


Q ss_pred             HHHHHHhcCCCCCCcEEEEe
Q psy4233         221 AAIVAACKDPDAAGKIYQAV  240 (303)
Q Consensus       221 ~~~~~~~~~~~~~g~~~~i~  240 (303)
                      ++++.++..+.. ...|.++
T Consensus       228 ~~i~~~~~~~~~-~~~~~~g  246 (273)
T PRK06182        228 DAISKAVTARRP-KTRYAVG  246 (273)
T ss_pred             HHHHHHHhCCCC-CceeecC
Confidence            999999985433 3356553

>PRK05717 oxidoreductase; Validated

Probab=99.85  E-value=8.2e-20  Score=155.12  Aligned_cols=217  Identities=12%  Similarity=0.038  Sum_probs=151.4

Q ss_pred             CCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        11 ~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      .+..+.++++++||||+|+||++++++|+++|++|++++|+.....+..+..  ..++.++.+|++|.+++.++++    
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3455677889999999999999999999999999999988643322211111  1358899999999988765443    


Q ss_pred             ---ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         .+|+|||+||....          ..++..+++|+.++.++++++..   ....++|++||...+...     ....
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----~~~~  155 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----PDTE  155 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----CCCc
Confidence               37999999996422          12346889999999999999863   223589999988765421     2346


Q ss_pred             chhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      .|+.+|...+.+++..      ++++..++||++.++....... ..+........+       . ..+.+.+|+|.+++
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~va~~~~  226 (255)
T PRK05717        156 AYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA-EPLSEADHAQHP-------A-GRVGTVEDVAAMVA  226 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc-hHHHHHHhhcCC-------C-CCCcCHHHHHHHHH
Confidence            8999999999888763      4788899999999874321100 001000011111       1 24689999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCc
Q psy4233         225 AACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .++...  ...|+.+.+.++.
T Consensus       227 ~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        227 WLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHcCchhcCccCcEEEECCCc
Confidence            998643  2357788886654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=153.99  Aligned_cols=215  Identities=12%  Similarity=0.041  Sum_probs=151.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      ++|+++||||+|+||.+++++|+++|++|+++.++..+..+... . .....+++++.+|++|.+++.+++++       
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999888775433222111 1 11124588999999999988877653       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        ...+..+++|+.++.++++++...    +-.++|+++|...+..     ......|+.+
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~-----~p~~~~Y~~s  162 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL-----NPDFLSYTLS  162 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC-----CCCchHHHHH
Confidence            7999999986322        223467889999999999987653    2348888887655432     1123579999


Q ss_pred             HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      |..+|.+.+..      .+.++.++||.+..+.......+..    .....+.        ....+++|+|++++.+++.
T Consensus       163 K~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~----~~~~~~~--------~~~~~~~d~a~~~~~~~~~  230 (258)
T PRK09134        163 KAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFAR----QHAATPL--------GRGSTPEEIAAAVRYLLDA  230 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHH----HHhcCCC--------CCCcCHHHHHHHHHHHhcC
Confidence            99999877764      3788889999887543221111111    1111111        2247899999999999987


Q ss_pred             CCCCCcEEEEeCCcccCHH
Q psy4233         230 PDAAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       230 ~~~~g~~~~i~~~~~~s~~  248 (303)
                      +...|+.|.+.++..++|.
T Consensus       231 ~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        231 PSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             CCcCCCEEEECCCeecccc
Confidence            7667889999888766554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.1e-20  Score=156.57  Aligned_cols=220  Identities=14%  Similarity=0.072  Sum_probs=151.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++|+||||+|+||++++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++..+++       +
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999754322211111 112458899999999988876664       4


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....         ......+++|+.++..+++++...   ...++|++||......     ..+...|+.+
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~~s  157 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----QPKYGAYKMA  157 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----CCCcchhHHH
Confidence            7999999986321         233467889999999999998652   1248999999876542     2345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhh----hcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHV----FRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+++..       +++++.++||.+++|....  .+.......    ............. ..+.+++|+|++++
T Consensus       158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~  234 (258)
T PRK07890        158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG--YFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVL  234 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH--HhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHHHHHHHH
Confidence            99999888764       6899999999999985321  111000000    0000000000111 34688999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCc
Q psy4233         225 AACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .+++..  ...|+.+.+.++.
T Consensus       235 ~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        235 FLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHcCHhhhCccCcEEEeCCcc
Confidence            998742  3357777666654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.85  E-value=1.2e-19  Score=153.48  Aligned_cols=213  Identities=15%  Similarity=0.093  Sum_probs=149.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|+++.|+..... +.+..  ...+++++.+|++|.+++.++++       
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA--LGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356889999999999999999999999999999998643211 11111  12458899999999998886654       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||++|....        ...+..+++|+.++.++++++..    .+ ..++|++||...+...     .....|+
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~  154 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-----IRVPSYT  154 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-----CCCchhH
Confidence            48999999986432        23345688999999999988753    23 3589999998777532     2345799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       +++++.++||.+..+.......-........+..+       . ..+++.+|+|++++.+
T Consensus       155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l  226 (248)
T TIGR01832       155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP-------A-GRWGTPDDIGGPAVFL  226 (248)
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence            9999999887764       68999999999987643211000000000111121       1 3579999999999999


Q ss_pred             hcCCC--CCCcEEEEeCC
Q psy4233         227 CKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~  242 (303)
                      +....  ..|+++.+.++
T Consensus       227 ~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       227 ASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             cCccccCcCCcEEEeCCC
Confidence            97533  25766666554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=153.52  Aligned_cols=213  Identities=14%  Similarity=0.083  Sum_probs=151.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      +++++++++||||+|.||++++++|+++|++|++++|+....     .  ...+++++++|+.|.+++.++++.      
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-----V--DGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-----h--cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            346678999999999999999999999999999999975431     0  123588999999999988877653      


Q ss_pred             -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       +|+|||++|....        ...+..+++|+.++..+++++..     .+..++|++||...+..     ......|+
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~  149 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----SPGTAAYG  149 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----CCCCchhH
Confidence             5999999985321        12346788999999999998754     23358999999877542     23457899


Q ss_pred             HHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         154 RTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       154 ~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+|...+.+++..      .+.+..++||.+..+.......-...........|.        ..+...+|+|++++.++
T Consensus       150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~va~~~~~L~  221 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL--------GRLATPADIAWACLFLA  221 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC--------CCCcCHHHHHHHHHHHc
Confidence            9999999988764      267788899988766321100000000001111221        23578999999999999


Q ss_pred             cCC--CCCCcEEEEeCCcccC
Q psy4233         228 KDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ...  ...|+.+.+.++...+
T Consensus       222 ~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        222 SDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             CcccCCccCCEEEECCCcchH
Confidence            753  2378888888776544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.3e-19  Score=153.53  Aligned_cols=213  Identities=9%  Similarity=0.046  Sum_probs=149.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--------   87 (303)
                      +++++++||||+|+||+++++.|+++|++|++..++.....+.+.... ..++.++++|+.|++++.+++++        
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            456799999999999999999999999999887664333222211111 14688999999999988877653        


Q ss_pred             cCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          88 SNVVINLIGREFA--------------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                      +|++||+++....              +.....+++|+.++.++++++.    ..+..++|++||.....     +..+.
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~  156 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----PVVPY  156 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----CCCCc
Confidence            8999999975210              1123568899999999999885    34456999999865432     23456


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +.|+.+|...+.+++..       ++.+..++||.+..+...... ............|+        ..+.+.+|+|++
T Consensus       157 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~va~~  227 (253)
T PRK08642        157 HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPL--------RKVTTPQEFADA  227 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCc--------CCCCCHHHHHHH
Confidence            78999999999998874       578888999988765221100 01111111122222        347899999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++.++...  ...|+.+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        228 VLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHcCchhcCccCCEEEeCCCe
Confidence            99999743  3478888887764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5e-20  Score=155.82  Aligned_cols=213  Identities=12%  Similarity=0.040  Sum_probs=151.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +.+++++||||+|.||++++++|+++|++|++++|+..+...... ......+++++.+|+.|.+++.++++       +
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999887543222111 11112458999999999998887764       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......++.|+.++.++++++...    +..++|++||...+...     .....|+.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~y~~s  159 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----PKLGAYVAS  159 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----CCcchHHHH
Confidence            8999999996432        122345778999999998887543    33499999997765421     234679999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh--HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR--YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+++..       ++.++.++||.+..+......  .......   ..       ... ..+++.+|+|++++.+
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~---~~-------~~~-~~~~~~~dva~~~~~l  228 (250)
T PRK12939        160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL---KG-------RAL-ERLQVPDDVAGAVLFL  228 (250)
T ss_pred             HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH---hc-------CCC-CCCCCHHHHHHHHHHH
Confidence            99999988753       588999999998776432211  1111110   11       122 4579999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCcc
Q psy4233         227 CKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~  244 (303)
                      +...  ...|+.+++.++..
T Consensus       229 ~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        229 LSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             hCccccCccCcEEEECCCcc
Confidence            9753  23788899887653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.4e-20  Score=155.01  Aligned_cols=217  Identities=13%  Similarity=0.069  Sum_probs=151.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .++++++++||||+|.||++++++|+++|++|++++|+.... +.... .....+++++.+|+++++++..+++      
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            346678999999999999999999999999999999976433 21111 1112458899999999998887775      


Q ss_pred             -ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       ++|+|||++|....       +..+..+++|+.++.++.+++..   .+..+||++||......     ......|+.+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~s  156 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----QGGTSGYAAA  156 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----CCCCchhHHH
Confidence             47999999995321       22345678889888888887643   22358999999877642     1345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH---HHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+++..       +++++.++||.+++|.... ...+.   .......+..+.      . ..++..+|+|++++
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~dva~~~~  229 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL------G-HRMTTAEEIADTAV  229 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc------c-ccCCCHHHHHHHHH
Confidence            99999988763       6899999999999874221 00000   000000111111      0 24688999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCc
Q psy4233         225 AACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .++...  ...|+.+.+.++.
T Consensus       230 ~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        230 FLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHhChhhccccCceEEecCCc
Confidence            999753  3457778776553

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=151.94  Aligned_cols=211  Identities=14%  Similarity=0.106  Sum_probs=149.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|.||++++++|+++|++|++++|+.....        ..++.++.+|+.|.+++.++++       .+
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL--------PEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            55789999999999999999999999999999999754321        1358899999999988775543       47


Q ss_pred             CEEEEccccCc----------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          89 NVVINLIGREF----------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        89 D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      |+|||+||...          .+.....+++|+.++.++.+++    ++.+..++|++||...+...    ......|+.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----~~~~~~Y~~  154 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----PESTTAYAA  154 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----CCCcchhHH
Confidence            99999998521          1234467888999887776654    44455689999998775421    124578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH--------HHHHh---hhcceeeecCCCceeeCcee
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG--------HMWRH---VFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~--------~~~~~---~~~~~~~~~~~~~~~~~~i~  215 (303)
                      +|...+.+++..       ++++.+++||.+.+|.... ...+.        .....   ....+|+        ..+..
T Consensus       155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~  226 (260)
T PRK06523        155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL--------GRPAE  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc--------CCCCC
Confidence            999999877663       6899999999999875321 11000        00000   0011121        23578


Q ss_pred             HHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         216 VGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      .+|+|+++++++..+  ...|+.+.+.++...|
T Consensus       227 ~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        227 PEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            899999999999753  3468889998876544

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.5e-19  Score=153.33  Aligned_cols=216  Identities=12%  Similarity=0.106  Sum_probs=153.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ..+++++++||||+|+||.+++++|+++|++|+++.|+.....+...  ......++.++.+|+.|.+.+.++++     
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999887533222111  11112458899999999998887664     


Q ss_pred             --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        ++|+|||+||....         +.....+++|+.++.++++++...  ...++|++||...+...     .....|+
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~  196 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-----ETLIDYS  196 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----CCcchhH
Confidence              47999999986322         122457889999999999998653  23589999998887532     2236799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+++..       +++++.++||.++.+..... .........       ...... ..+.+.+|+|++++.+
T Consensus       197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~-~~~~~~~~~-------~~~~~~-~~~~~~~dva~~~~~l  267 (290)
T PRK06701        197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD-FDEEKVSQF-------GSNTPM-QRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc-cCHHHHHHH-------HhcCCc-CCCcCHHHHHHHHHHH
Confidence            9999999877663       68999999999988742210 000111101       111122 4578999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCc
Q psy4233         227 CKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~  243 (303)
                      +....  ..|..+++.++.
T Consensus       268 l~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             cCcccCCccCcEEEeCCCc
Confidence            97532  368888887764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.7e-19  Score=149.88  Aligned_cols=204  Identities=15%  Similarity=0.082  Sum_probs=145.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------ccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~   90 (303)
                      .+++++||||+|+||++++++|+++|++|+++.|+..+..          ..+++.+|+.|.+++.+++.      ++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF----------PGELFACDLADIEQTAATLAQINEIHPVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc----------CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence            4679999999999999999999999999999999764310          13578999999998887665      4799


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |||++|....        ......+++|+.++.++.+++    ++.+..++|++||...++.      .....|+.+|..
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------~~~~~Y~~sK~a  145 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA------LDRTSYSAAKSA  145 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC------CCchHHHHHHHH
Confidence            9999996432        223356778888877776655    4456679999999876653      234789999999


Q ss_pred             HHHHHHh-------hCCCEEEEeecceeeCCCchhhH-HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         159 GEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY-YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       159 ~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+.+++.       .++.+++++||.+..+....... ............+.        ..+...+|+|.+++.++..+
T Consensus       146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM--------RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC--------CCCcCHHHHHHHHHHHhCcc
Confidence            9887765       27999999999998764221100 00000000011111        12467899999999999754


Q ss_pred             C--CCCcEEEEeCCcc
Q psy4233         231 D--AAGKIYQAVGPKR  244 (303)
Q Consensus       231 ~--~~g~~~~i~~~~~  244 (303)
                      .  ..|+.+.+.++..
T Consensus       218 ~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        218 AGFITGQVLGVDGGGS  233 (234)
T ss_pred             cCCccceEEEecCCcc
Confidence            2  3578888876643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-19  Score=153.62  Aligned_cols=217  Identities=14%  Similarity=0.074  Sum_probs=150.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++++||||+|+||.++++.|+++|++|++++|+.....+... ......+++++.+|+++.+++.++++      
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34678899999999999999999999999999999997543221111 11112458889999999998877654      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|+|||+||....        ......+++|+.++.++.+++..     .+..++|++||......     ..+...|
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y  160 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----GRGFAAY  160 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----CCCCchh
Confidence             57999999985321        23456789999999999999864     34568999999765431     2445789


Q ss_pred             hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +.+|..++.+++..      .+.++.++||.+..+.......-..+........+.        ......+|+|++++.+
T Consensus       161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l  232 (263)
T PRK07814        161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPL--------RRLGDPEDIAAAAVYL  232 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            99999999988874      367888899888655321110000110001111111        2357889999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+.+.+.++.
T Consensus       233 ~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        233 ASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             cCccccCcCCCEEEECCCc
Confidence            9752  2367777776654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=1e-19  Score=174.24  Aligned_cols=224  Identities=18%  Similarity=0.117  Sum_probs=157.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +.+++++||||+|+||+++++.|+++|++|++++|+...............++.++.+|++|.+++.++++       ++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999754322211111111368899999999998887665       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCC-ceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGV-EKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |+|||++|....        ......+++|+.++.++++++.    +.+. .+||++||.......     .....|+.+
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----~~~~~Y~as  574 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----PNFGAYGAA  574 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----CCcHHHHHH
Confidence            999999996322        2334678899999999977664    4443 689999998765421     234789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcc----eeeecCCCceeeCceeHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRK----LAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      |...+.+++.+       ++++++++|+.+| +++.....+........+..    ...++.+... ..+++.+|+|+++
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-~~~v~~~DvA~a~  653 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLL-KREVTPEDVAEAV  653 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCc-CCccCHHHHHHHH
Confidence            99999988764       5899999999998 54321111110000000000    0123333344 6789999999999


Q ss_pred             HHHhc--CCCCCCcEEEEeCCccc
Q psy4233         224 VAACK--DPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~--~~~~~g~~~~i~~~~~~  245 (303)
                      +.++.  .....|+++++.+|...
T Consensus       654 ~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        654 VFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHhCccccCCcCCEEEECCCchh
Confidence            99984  34456889999888654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-19  Score=152.49  Aligned_cols=217  Identities=13%  Similarity=0.106  Sum_probs=150.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.++++.|+++|++|++++|+..+....... .....+++++.+|++|++++.+++.       .
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999975432211111 1112357889999999998866553       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc-----CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM-----GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||++|....        ......+++|+.++.++++++...     +..++|++||...+...... ..+..+|+.
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-~~~~~~Y~~  168 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-VMDTIAYNT  168 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-ccCcchHHH
Confidence            7999999986321        122356789999999999987654     56799999998665432111 123478999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|+.++.+++.+       ++++.+++|+.+-.+...  ..+....+......++        .-+...+|+|++++.++
T Consensus       169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~  238 (259)
T PRK08213        169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR--GTLERLGEDLLAHTPL--------GRLGDDEDLKGAALLLA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh--hhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence            999999988764       588999999888765322  1122222111111111        23567899999999988


Q ss_pred             cCC--CCCCcEEEEeCCc
Q psy4233         228 KDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~  243 (303)
                      ...  ...|+.+++.++.
T Consensus       239 ~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        239 SDASKHITGQILAVDGGV  256 (259)
T ss_pred             CccccCccCCEEEECCCe
Confidence            643  2368888887653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.7e-20  Score=155.98  Aligned_cols=207  Identities=20%  Similarity=0.120  Sum_probs=144.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D   89 (303)
                      ++++|+||||+|+||++++++|+++|++|++++|+..+...       ..+++++++|++|++++.+++++       +|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            45689999999999999999999999999999997543221       14588999999999999887764       69


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||++|....        ......+++|+.++.++++++    ++.+.++||++||...+..     ......|+.+|.
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK~  150 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----APYMALYAASKH  150 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----CCCccHHHHHHH
Confidence            99999996322        123567889999988888874    5667789999999876642     123468999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..+.+++.       .++++++++||.+.++......    .+...............  ... ......+|+|+.++.+
T Consensus       151 a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~va~~~~~~  227 (270)
T PRK06179        151 AVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA--KAV-KKADAPEVVADTVVKA  227 (270)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH--hcc-ccCCCHHHHHHHHHHH
Confidence            99987665       3899999999999876432110    00000000000000000  001 2346789999999999


Q ss_pred             hcCCCCCCcEEEE
Q psy4233         227 CKDPDAAGKIYQA  239 (303)
Q Consensus       227 ~~~~~~~g~~~~i  239 (303)
                      +..+.. +..|..
T Consensus       228 ~~~~~~-~~~~~~  239 (270)
T PRK06179        228 ALGPWP-KMRYTA  239 (270)
T ss_pred             HcCCCC-CeeEec
Confidence            986443 335543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-19  Score=152.13  Aligned_cols=216  Identities=14%  Similarity=0.057  Sum_probs=151.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++.+++++||||+|.||.+++++|+++|++|++++|+.....+...... ...++.++.+|++|++++.+++.       
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999999987543222111111 12357889999999998887664       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      .+|+|||++|....        ...+..+++|+.++..+++++..    .+..+||++||......     ......|+.
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~  160 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----RDTITPYAA  160 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----CCCCcchHH
Confidence            37999999986321        23345788999998888887654    34568999999865421     134578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+++..       ++++..++||++..+...................|+        ..+...+|+|++++.++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~va~~~~~l~  232 (254)
T PRK08085        161 SKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA--------ARWGDPQELIGAAVFLS  232 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence            999999988774       689999999999887432110001111101112221        34688999999999999


Q ss_pred             cCC--CCCCcEEEEeCCc
Q psy4233         228 KDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~  243 (303)
                      ...  ...|++..+.++.
T Consensus       233 ~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        233 SKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CccccCCcCCEEEECCCe
Confidence            743  3367788777664

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-19  Score=148.80  Aligned_cols=205  Identities=17%  Similarity=0.129  Sum_probs=145.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++|+||||+|+||++++++|+++|++|++++|++..............+++++.+|+.|.+++.+.++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45679999999999999999999999999999999754322211111111468899999999998887665       58


Q ss_pred             CEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          89 NVVINLIGREFAT--------KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        89 D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |+|||+++.....        .....+++|+.++..+++++..   .+.+++|++||......     ......|..+|+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~y~~sk~  158 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----FAGGAAYNASKF  158 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----CCCCchHHHHHH
Confidence            9999999863221        1235688899999998888754   24468999999876532     234567999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+.       .+++++++||+.+.++.....         ..         ... ...+..+|++++++.++..+
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~---------~~---------~~~-~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT---------PS---------EKD-AWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc---------cc---------hhh-hccCCHHHHHHHHHHHHhCC
Confidence            88776665       378999999999876532110         00         000 12378999999999999875


Q ss_pred             CC-CCcEEEEeCCcc
Q psy4233         231 DA-AGKIYQAVGPKR  244 (303)
Q Consensus       231 ~~-~g~~~~i~~~~~  244 (303)
                      .. ......+..+++
T Consensus       220 ~~~~~~~~~~~~~~~  234 (237)
T PRK07326        220 PRTLPSKIEVRPSRP  234 (237)
T ss_pred             ccccccceEEecCCC
Confidence            43 334555554443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.84  E-value=1.5e-19  Score=152.81  Aligned_cols=197  Identities=19%  Similarity=0.152  Sum_probs=136.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   91 (303)
                      |+|+||||+|+||.++++.|+++|++|++++|+...........  ..+++++.+|+.|.+++.++++       ++|.|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999754322211111  1358899999999988877664       58999


Q ss_pred             EEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||++|....         ......+++|+.++..+++++    ++.+..++|++||.....     +......|+.+|..
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----~~~~~~~Y~~sK~~  153 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----PYAGGNVYGATKAF  153 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----CCCCCchhHHHHHH
Confidence            999986321         122456788888865555554    556667999999987653     22345789999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      .+.+.+..       ++.+.+++||.+.|+........... . ....  .+    .. ..++..+|+|++++.++..+.
T Consensus       154 ~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~-~~~~--~~----~~-~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-G-KAEK--TY----QN-TVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-H-HHHh--hc----cc-cCCCCHHHHHHHHHHHhcCCC
Confidence            99887663       58899999999986532110000000 0 0000  00    01 245799999999999997543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.2e-19  Score=150.14  Aligned_cols=214  Identities=13%  Similarity=0.087  Sum_probs=151.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++.+++++||||+|+||.+++++|+++|++|++++|+.... +..... ...++..+.+|+.|.+++..++.       +
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL-LGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999975321 111111 12347789999999998877664       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......+++|+.++.++++++..    .+..++|++||......     ......|+.+
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~s  164 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA-----LERHVAYCAS  164 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC-----CCCCchHHHH
Confidence            7999999996422        12235788999999999998764    35569999999865431     1234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++.+..++||.+..+....... ..........++       . ..+.+.+|+|++++.++.
T Consensus       165 K~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l~~  235 (255)
T PRK06841        165 KAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIP-------A-GRFAYPEEIAAAALFLAS  235 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcC
Confidence            99998877653       6889999999998764221000 000000111222       1 357899999999999997


Q ss_pred             CCC--CCCcEEEEeCCcc
Q psy4233         229 DPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~~  244 (303)
                      .+.  ..|+.+.+.++..
T Consensus       236 ~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        236 DAAAMITGENLVIDGGYT  253 (255)
T ss_pred             ccccCccCCEEEECCCcc
Confidence            542  3688888877653

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.4e-19  Score=151.98  Aligned_cols=198  Identities=16%  Similarity=0.096  Sum_probs=141.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +++|+||||+|+||+++++.|+++|++|++++|+..+...... +.....++.++.+|+.|.+.+..+++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999997543221111 11112468889999999998887765       579


Q ss_pred             EEEEccccCccc---------cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFAT---------KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||++|.....         .....+++|+.++.++++.+..   .+..++|++||...+..     ..+...|+.+|.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~  155 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----VPTRSGYAASKH  155 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----CCCccHHHHHHH
Confidence            999999863221         1234588999999999998853   23468999999887652     234578999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ..+.+.+..       +++++.++||.+..+.....  .      .....+....+.+. ..+++++|+|++++.++..
T Consensus       156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~--~------~~~~~~~~~~~~~~-~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA--L------DGDGKPLGKSPMQE-SKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh--c------cccccccccccccc-cCCCCHHHHHHHHHHHhhC
Confidence            999887652       68999999999986633210  0      00011111112222 3689999999999999975

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.83  E-value=4.7e-19  Score=149.37  Aligned_cols=213  Identities=15%  Similarity=0.110  Sum_probs=149.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||+++++.|+++|++|+++.|+.....+... . .....++.++.+|+.|.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999997532211111 1 1112458999999999998877664       37


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||++|....        +..+..+++|+.++.++.++    +++.+..++|++||...+...     .....|..+|
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~~~Y~~sK  156 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-----FGQTNYSAAK  156 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-----CCChHHHHHH
Confidence            999999986322        22345778899998887554    455666799999998776421     2346799999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+++..       ++++++++|+.+.++.......  ..........+       . ..+...+|+++++..++..
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l~~~  226 (245)
T PRK12824        157 AGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--EVLQSIVNQIP-------M-KRLGTPEEIAAAVAFLVSE  226 (245)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--HHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHcCc
Confidence            9888777653       6899999999998774321111  11110111111       1 3467889999999998864


Q ss_pred             C--CCCCcEEEEeCCccc
Q psy4233         230 P--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~~~  245 (303)
                      .  ...|+.+++.++..+
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        227 AAGFITGETISINGGLYM  244 (245)
T ss_pred             cccCccCcEEEECCCeec
Confidence            3  236889999888643

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.4e-19  Score=148.64  Aligned_cols=214  Identities=14%  Similarity=0.084  Sum_probs=148.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ..++++++||||+|+||++++++|+++|++|+++.|+.........  ......++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999888776443222111  11112468899999999998888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       ++|+|||++|....        ...+..+++|+.++.++++++...  ...++|++||......     ..+...|+.+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~s  156 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-----LPGYGPYAAS  156 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-----CCCCchhHHH
Confidence             48999999996421        123356789999999999888653  2248999998766532     2345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++..       ++.++.++||.+..+..... ..........+..++        ..+.+.+|+|++++.++.
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQIDQLAGLAPL--------ERLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcC
Confidence            99999888763       58889999998876531100 001111111111221        235688999999999997


Q ss_pred             CCC--CCCcEEEEeCC
Q psy4233         229 DPD--AAGKIYQAVGP  242 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~  242 (303)
                      .+.  ..|+.+++.++
T Consensus       228 ~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        228 PDGAWVNGQVLRVNGG  243 (245)
T ss_pred             ccccCccccEEEeCCC
Confidence            532  35778888654

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.2e-19  Score=149.22  Aligned_cols=218  Identities=14%  Similarity=0.048  Sum_probs=148.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      |++++++++||||+|.||.+++++|+++|++|++++|+..+..+..... ....++.++.+|+.|++++.++++      
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3456789999999999999999999999999999999754322211111 112458889999999998887765      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       .+|++||+||....         +..+..+++|+.++..+++++    ++.+..++|++||...+..    +......|
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----~~~~~~~Y  157 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----GFPGMAAY  157 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----CCCCcchh
Confidence             47999999986321         123467889998777665544    4455568999999876531    11345789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++.+..++||.+-.+...................+       . ..+...+|+|+++++
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~  229 (254)
T PRK07478        158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA-------L-KRMAQPEEIAQAALF  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHH
Confidence            99999999887763       58899999999976632111000000000001111       1 235789999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCc
Q psy4233         226 ACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~  243 (303)
                      ++.++.  ..|+++.+.++.
T Consensus       230 l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        230 LASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HcCchhcCCCCCeEEeCCch
Confidence            997532  367888886654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=5.7e-19  Score=150.19  Aligned_cols=214  Identities=17%  Similarity=0.135  Sum_probs=149.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|.||.+++++|+++|++|+++.|+ .+..+..... ....+++++.+|++|.+++..+++       .
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999887 2211111111 112458899999999998887765       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||++|....        ...+..+++|+.++..+.+++.    +.+..++|++||...+...     .....|+.+
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  166 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG-----KFVPAYTAS  166 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-----CCchhhHHH
Confidence            7999999986321        1334578889999877776654    4455699999998876421     234589999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++..       +++++.++||.+..+..................++.        ..+...+|+|.++++++.
T Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~s  238 (258)
T PRK06935        167 KHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA--------GRWGEPDDLMGAAVFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcC
Confidence            99999988763       689999999998876422111000000001111221        246888999999999987


Q ss_pred             CC--CCCCcEEEEeCCc
Q psy4233         229 DP--DAAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~  243 (303)
                      ..  ...|+++.+.++.
T Consensus       239 ~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        239 RASDYVNGHILAVDGGW  255 (258)
T ss_pred             hhhcCCCCCEEEECCCe
Confidence            43  2368888887764

>KOG1221|consensus

Probab=99.83  E-value=3.7e-19  Score=157.86  Aligned_cols=244  Identities=18%  Similarity=0.162  Sum_probs=173.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhc----------------CCCCceEEEecCCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLC----------------GDLGQVLFQPYHPR   76 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~----------------~~~~~~~~~~~Dl~   76 (303)
                      ..+++|+|||||||+|.-++..|++.-   .+++++.|.........+..                ..+.++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            468899999999999999999999863   57899999765443221111                12367899999997


Q ss_pred             CH------HHHHHHhcccCEEEEccccCcc-ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCC--------
Q psy4233          77 ND------DEIRKAIKYSNVVINLIGREFA-TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPN--------  140 (303)
Q Consensus        77 d~------~~~~~~~~~~D~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~--------  140 (303)
                      ++      +++....+++|+|||+|+...+ +.-.....+|..|++++++.|++.. .+-+|++||..+...        
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~  169 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP  169 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence            63      5566677789999999997544 4445688899999999999999975 789999999887421        


Q ss_pred             ---CCCCC------------------------CCCCCchhHHHHHHHHHHHhh--CCCEEEEeecceeeCCCc-hhhHHH
Q psy4233         141 ---PPTYY------------------------ISGGSQFYRTKYQGEKEVLRE--FPEATIFRPSDMYGSGDK-FLRYYG  190 (303)
Q Consensus       141 ---~~~~~------------------------~~~~~~y~~~K~~~e~~~~~~--~~~~~ilrp~~~~G~~~~-~~~~~~  190 (303)
                         .+..+                        ....+.|.-+|+.+|.++.+.  ++|.+|+||+.+...... +..++.
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWid  249 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWID  249 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccc
Confidence               11000                        012678999999999999886  699999999999984221 111111


Q ss_pred             -------HHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC----CC-CCCcEEEEeCCc--ccCHHHHHHHHH
Q psy4233         191 -------HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD----PD-AAGKIYQAVGPK--RYLLSELLDWFH  255 (303)
Q Consensus       191 -------~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~----~~-~~g~~~~i~~~~--~~s~~e~~~~i~  255 (303)
                             -++.. ++..-.+..+.+.. .+.|.+|.++.+++.+...    .. ....+||+++++  +++|.++.+...
T Consensus       250 n~~gp~g~i~g~gkGvlr~~~~d~~~~-adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~  328 (467)
T KOG1221|consen  250 NLNGPDGVIIGYGKGVLRCFLVDPKAV-ADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELAL  328 (467)
T ss_pred             cCCCCceEEEEeccceEEEEEEccccc-cceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHH
Confidence                   11111 22222333444444 7899999999999876621    11 124599999874  489999999998


Q ss_pred             HHhcC
Q psy4233         256 VVMKK  260 (303)
Q Consensus       256 ~~~g~  260 (303)
                      +...+
T Consensus       329 ~~~~~  333 (467)
T KOG1221|consen  329 RYFEK  333 (467)
T ss_pred             Hhccc
Confidence            88763

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.83  E-value=6.2e-19  Score=148.64  Aligned_cols=212  Identities=16%  Similarity=0.087  Sum_probs=146.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++++||||+|+||+++++.|+++|+.|++..|+...........  ..+++++.+|++|.+++.++++       +
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            456789999999999999999999999998888877643322211111  2358899999999988877643       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......+++|+.++.++++++..    .+..++|++||...+...     .....|+.+
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~s  155 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN-----PGQANYCAS  155 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-----CCCcchHHH
Confidence            8999999996322        23356788999999888887642    355699999997554321     224679999


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+.       .+++++.++||.+..+........  .........+       . ..+.+.+|+++++..++.
T Consensus       156 k~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~-------~-~~~~~~~~ia~~~~~l~~  225 (245)
T PRK12936        156 KAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK--QKEAIMGAIP-------M-KRMGTGAEVASAVAYLAS  225 (245)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH--HHHHHhcCCC-------C-CCCcCHHHHHHHHHHHcC
Confidence            9977766654       268999999998865532211110  0000011111       1 336789999999998886


Q ss_pred             CCC--CCCcEEEEeCCc
Q psy4233         229 DPD--AAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~  243 (303)
                      ...  ..|+.+++.++.
T Consensus       226 ~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        226 SEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             ccccCcCCCEEEECCCc
Confidence            533  268899988764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.7e-19  Score=150.42  Aligned_cols=211  Identities=16%  Similarity=0.105  Sum_probs=143.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||++++++|+++|++|++..++.........  ......++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4589999999999999999999999988877654332222111  11111357889999999998887765       47


Q ss_pred             CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHHhc------C-CceEEEEecCccC-CCCCCCCCCCCCc
Q psy4233          89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSKEM------G-VEKFIHISALNAD-PNPPTYYISGGSQ  151 (303)
Q Consensus        89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~------~-~~~~v~~Ss~~~~-~~~~~~~~~~~~~  151 (303)
                      |+|||++|.....         .....+++|+.++.++++++...      + -.++|++||.... +.+     .....
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----~~~~~  156 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-----GEYID  156 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----CCccc
Confidence            9999999864221         22356889999999988877542      1 1369999997654 321     11246


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+++..       +++++++||+.+++|...... ............|+        .-+.+++|++++++
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~--------~~~~~~~d~a~~~~  227 (248)
T PRK06123        157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPM--------GRGGTAEEVARAIL  227 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence            999999999877653       799999999999998432111 11111111111221        12357899999999


Q ss_pred             HHhcCCC--CCCcEEEEeCC
Q psy4233         225 AACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~  242 (303)
                      .++....  ..|+.|++.++
T Consensus       228 ~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        228 WLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHhCccccCccCCEEeecCC
Confidence            9987532  46889998765

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=3.9e-19  Score=150.58  Aligned_cols=212  Identities=12%  Similarity=0.078  Sum_probs=148.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            55789999999999999999999999999999998754322211111 112458889999999888776554       3


Q ss_pred             cCEEEEccccCcc-----------------ccchhhhhhhcchHHHHHHHHH----hc-CCceEEEEecCccCCCCCCCC
Q psy4233          88 SNVVINLIGREFA-----------------TKNFTIADANVEIPARLARLSK----EM-GVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        88 ~D~vi~~a~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      +|+|||++|....                 ......+++|+.++..+.+++.    +. .-.++|++||...++.     
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----  157 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-----  157 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence            6999999985321                 1123466788888877665443    22 2247999999877653     


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                       .+...|+.+|...+.+++..       +++++.++|+.+.++.....  ............+       . ..+.+.+|
T Consensus       158 -~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~  226 (253)
T PRK08217        158 -MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIP-------V-GRLGEPEE  226 (253)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCC-------c-CCCcCHHH
Confidence             34578999999999877653       68999999999987753211  1111111111112       1 34678999


Q ss_pred             HHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         219 VAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       219 va~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                      +|+++..++......|++|++.++-
T Consensus       227 ~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        227 IAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            9999999997655578999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.83  E-value=1.4e-18  Score=147.84  Aligned_cols=211  Identities=15%  Similarity=0.079  Sum_probs=148.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|.||.+++++|+++|++|++++|+....          .+++++.+|++|++++.++++       .
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   72 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGR   72 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999975321          248899999999988877664       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++..+++++..    .+..++|++||...+..     ......|+.+
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s  147 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----TRNAAAYVTS  147 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----CCCCchhhhh
Confidence            8999999986321        22345689999999988887743    34569999999877642     2445789999


Q ss_pred             HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..      .+.+..++||.+-.|.......     -.......   ...++..... ..+...+|+|++++
T Consensus       148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~p~eva~~~~  223 (258)
T PRK06398        148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERK---IREWGEMHPM-KRVGKPEEVAYVVA  223 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHH---HHhhhhcCCc-CCCcCHHHHHHHHH
Confidence            99999988764      3778889999886552211000     00000000   0000011111 24678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++...  ...|+.+.+.++..
T Consensus       224 ~l~s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        224 FLASDLASFITGECVTVDGGLR  245 (258)
T ss_pred             HHcCcccCCCCCcEEEECCccc
Confidence            998743  23677888777643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=7.6e-19  Score=149.18  Aligned_cols=212  Identities=17%  Similarity=0.138  Sum_probs=146.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|.||.+++++|+++|++|+++.|+.....+.+..    .++.++.+|++|++++.++++       ++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999887765433332221    247899999999998887765       47


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||++|....        ......+++|+.++..+.+    .+++.+..++|++||...+...    ......|+.+|
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----~~~~~~Y~asK  156 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----AEGTTFYAITK  156 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----CCCccHhHHHH
Confidence            999999986321        2234678889999655544    4444455699999998877421    12346799999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCch---hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKF---LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ...+.+++..       +++++.++||.+-.+....   ...............+       . ..+...+|+|++++.+
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l  228 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV-------L-KTTGKPEDIANIVLFL  228 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC-------c-CCCcCHHHHHHHHHHH
Confidence            9999887763       6899999999886542110   0000000000011111       1 3467899999999999


Q ss_pred             hcCCC--CCCcEEEEeCCc
Q psy4233         227 CKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~  243 (303)
                      +....  ..|+.+.+.++.
T Consensus       229 ~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        229 ASDDARYITGQVIVADGGR  247 (255)
T ss_pred             cChhhcCCCCCEEEECCCe
Confidence            97543  368888887765

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.5e-19  Score=148.82  Aligned_cols=211  Identities=15%  Similarity=0.041  Sum_probs=149.3

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEEEccccC
Q psy4233          22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVINLIGRE   98 (303)
Q Consensus        22 lVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi~~a~~~   98 (303)
                      +||||+|+||++++++|+++|++|++++|+...............+++++.+|++|.+++.++++.   +|.+||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            599999999999999999999999999997433222111111124588999999999999988875   79999999863


Q ss_pred             cc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh----
Q psy4233          99 FA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE----  166 (303)
Q Consensus        99 ~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~----  166 (303)
                      ..        ...+..+++|+.++.+++++....+..++|++||...+..     ..+...|+.+|...+.+.+..    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~  155 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----SASGVLQGAINAALEALARGLALEL  155 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            22        2345678899999999999666556679999999988753     234568999999999988775    


Q ss_pred             -CCCEEEEeecceeeCCCchh--hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         167 -FPEATIFRPSDMYGSGDKFL--RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       167 -~~~~~ilrp~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                       .++++.++|+.+-.|.....  ..............+.        ..+...+|+|++++.++......|+.|++.+++
T Consensus       156 ~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~  227 (230)
T PRK07041        156 APVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA--------RRVGQPEDVANAILFLAANGFTTGSTVLVDGGH  227 (230)
T ss_pred             hCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCe
Confidence             45677888887765421110  0000111101111121        124678999999999998665668899998876


Q ss_pred             cc
Q psy4233         244 RY  245 (303)
Q Consensus       244 ~~  245 (303)
                      ++
T Consensus       228 ~~  229 (230)
T PRK07041        228 AI  229 (230)
T ss_pred             ec
Confidence            53

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.8e-19  Score=152.55  Aligned_cols=191  Identities=18%  Similarity=0.138  Sum_probs=137.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++++||||||.||++++++|+++|++|++++|+..........   ..+++++.+|++|++++.++++       +
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAE---LGLVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---hccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46678999999999999999999999999999999875432211111   1248889999999988766553       3


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||++|....        ......+++|+.++..+++++    ++.+..+||++||...+..     ......|+.+
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  153 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-----VPGMATYCAS  153 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-----CCCCcchHHH
Confidence            7999999996322        122457788998888777665    4556679999999877642     1345789999


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+.       .++++++++|+.+..+....              .+    +... ..+++.+|+|++++.++.
T Consensus       154 Kaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~--------------~~----~~~~-~~~~~~~~va~~~~~~l~  214 (273)
T PRK07825        154 KHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG--------------TG----GAKG-FKNVEPEDVAAAIVGTVA  214 (273)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc--------------cc----cccC-CCCCCHHHHHHHHHHHHh
Confidence            9887765443       37999999999876442110              00    0111 357899999999999998


Q ss_pred             CCCC
Q psy4233         229 DPDA  232 (303)
Q Consensus       229 ~~~~  232 (303)
                      ++..
T Consensus       215 ~~~~  218 (273)
T PRK07825        215 KPRP  218 (273)
T ss_pred             CCCC
Confidence            6543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=5.1e-19  Score=148.75  Aligned_cols=193  Identities=18%  Similarity=0.077  Sum_probs=141.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....+++++.+|+++++++.++++       +
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4567999999999999999999999999999999975432211111 1112368899999999999888775       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ...+..+++|+.++.++.+++..    .+.+++|++||...+...     .+...|+.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~~Y~~s  159 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----AVTSAYSAS  159 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----CCCcchHHH
Confidence            8999999986322        12245788999998888887753    456789999998765431     344679999


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++.       .++++++++||.+.++......            .+   . ... ..++..+|+|++++.++.
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------------~~---~-~~~-~~~~~~~~~a~~~~~~l~  222 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG------------LT---D-GNP-DKVMQPEDLAEFIVAQLK  222 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc------------cc---c-cCC-CCCCCHHHHHHHHHHHHh
Confidence            9998887654       3799999999999876322110            00   0 011 246889999999999998


Q ss_pred             CC
Q psy4233         229 DP  230 (303)
Q Consensus       229 ~~  230 (303)
                      ++
T Consensus       223 ~~  224 (239)
T PRK07666        223 LN  224 (239)
T ss_pred             CC
Confidence            64

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.6e-19  Score=150.73  Aligned_cols=188  Identities=14%  Similarity=0.043  Sum_probs=137.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~   90 (303)
                      +++|+||||+|+||+++++.|+++|++|++++|+.....+.........++.++.+|++|.+++.++++.       +|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5799999999999999999999999999999997543222111111112688999999999988876643       799


Q ss_pred             EEEccccCcc---------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREFA---------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +||++|....         ...+..+++|+.++.++++    ++++.+..++|++||...+..     ......|+.+|.
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asK~  156 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG-----LPGAGAYSASKA  156 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----CCCCcchHHHHH
Confidence            9999986321         1234678899999988777    445566679999999766532     123468999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+++.       .++++++++||.+.+|....          .  ..       .. -.++..+++|+.++.++.++
T Consensus       157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----------~--~~-------~~-~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        157 AAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH----------N--PY-------PM-PFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc----------C--CC-------CC-CCccCHHHHHHHHHHHHhCC
Confidence            99988755       37999999999998763210          0  00       00 01368999999999999753

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3e-19  Score=151.74  Aligned_cols=207  Identities=11%  Similarity=-0.026  Sum_probs=137.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-ccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~a   95 (303)
                      +++|+||||||+||++++++|+++|++|++++|+.....+..... ....+++++.+|+.|++++..++. ++|+|||++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            568999999999999999999999999999999753321111100 112358899999999999998887 699999999


Q ss_pred             ccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233          96 GREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        96 ~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      |....        ...+..+++|+.++.++.++    +++.+.+++|++||.......     .....|+.+|...|.+.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----~~~~~Y~~sK~a~~~~~  156 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----PFTGAYCASKHALEAIA  156 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----CCcchhHHHHHHHHHHH
Confidence            86322        12234667788877665554    455666899999997654321     23468999999999866


Q ss_pred             Hh-------hCCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         164 LR-------EFPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       164 ~~-------~~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      +.       .+++++++|||.+..+... ....+..+.......++.. .+... .+++..+|++..++.++..+.
T Consensus       157 ~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        157 EAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPE-DLAFP-LEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhh-hhhcc-ccCCCHHHHHHHHHHHhcCCC
Confidence            54       4799999999987543211 1111111110000001110 01112 356889999999999887543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.7e-19  Score=148.86  Aligned_cols=211  Identities=12%  Similarity=-0.011  Sum_probs=144.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++++|+.|.+++..+++       ++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            45689999999999999999999999999999988643222111111  1357889999999887665443       47


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCcc-CCCCCCCCCCCCCchhHHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNA-DPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |+|||++|....        ..++..+++|+.++.++++++...  ...++|++||... ++.      .....|+.+|.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------~~~~~Y~~sK~  155 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------PNSSVYAASKA  155 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------CCccHHHHHHH
Confidence            999999986321        233467899999999999999742  2247777777544 442      34578999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchh----hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFL----RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..|.+++..       ++++++++||.+++|.....    .....+.+...+..++        .-+...+|+|++++++
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l  227 (249)
T PRK06500        156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL--------GRFGTPEEIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            999988542       68999999999998742110    0111111111111121        1256899999999999


Q ss_pred             hcCCC--CCCcEEEEeCC
Q psy4233         227 CKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~  242 (303)
                      +..+.  ..|....+.++
T Consensus       228 ~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        228 ASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             cCccccCccCCeEEECCC
Confidence            87532  25666666555

>PRK12743 oxidoreductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=148.27  Aligned_cols=212  Identities=13%  Similarity=0.097  Sum_probs=148.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||+++++.|+++|++|+++.|++....+...  ......+++++.+|++|++++..+++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999988775443322211  11112458899999999988776654       37


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |+|||++|....        +.....+++|+.++..+++++...    + -.++|++||.....     +..+...|+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----~~~~~~~Y~~s  156 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----PLPGASAYTAA  156 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----CCCCcchhHHH
Confidence            999999986322        223467889999999999887543    1 24899999976543     22445789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++..       +++++.++||.+++|......  ...........++        ..+.+.+|+|++++.++.
T Consensus       157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~  226 (256)
T PRK12743        157 KHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--SDVKPDSRPGIPL--------GRPGDTHEIASLVAWLCS  226 (256)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--hHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhC
Confidence            99999887653       689999999999987432111  0111001112221        235688999999999987


Q ss_pred             CCC--CCCcEEEEeCCcc
Q psy4233         229 DPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~~  244 (303)
                      ...  ..|.++.+.++..
T Consensus       227 ~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        227 EGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             ccccCcCCcEEEECCCcc
Confidence            533  3688888877754

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=3.9e-19  Score=150.04  Aligned_cols=214  Identities=14%  Similarity=0.070  Sum_probs=148.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++||||||+||+++++.|+++|++|+++ .|+.......... .....++.++.+|++|++++.++++      
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999998 7764332111111 1112458899999999998887765      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||++|....        ...+..+++|+.++.++++++..    .+.+++|++||...+...     .....|+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----~~~~~y~  156 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-----SCEVLYS  156 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-----CCccHHH
Confidence             68999999986421        12346788899998888887754    345689999997765421     2345799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+++..       +++++.++||.+..+........  ........       ... ..+...+|+|++++.+
T Consensus       157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~--~~~~~~~~-------~~~-~~~~~~~~va~~~~~l  226 (247)
T PRK05565        157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE--DKEGLAEE-------IPL-GRLGKPEEIAKVVLFL  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH--HHHHHHhc-------CCC-CCCCCHHHHHHHHHHH
Confidence            9998877766553       78999999999876543221110  10000000       111 3467999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +.+.  ...|+.+++.++.
T Consensus       227 ~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        227 ASDDASYITGQIITVDGGW  245 (247)
T ss_pred             cCCccCCccCcEEEecCCc
Confidence            9753  2367788887653

>PRK09242 tropinone reductase; Provisional

Probab=99.82  E-value=1e-18  Score=148.55  Aligned_cols=218  Identities=15%  Similarity=0.093  Sum_probs=151.8

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc--
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK--   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~--   86 (303)
                      .+..+.+++++||||+|.||.++++.|+++|++|++++|+.........   ......++.++.+|++|.+++..++.  
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3455678899999999999999999999999999999997533221111   11012468889999999988766554  


Q ss_pred             -----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 -----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 -----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                           ++|+|||++|....        ......+++|+.++.++++++.    +.+..++|++||...+...     ...
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~  157 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----RSG  157 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----CCC
Confidence                 47999999986321        2334678899999999988874    3455699999998776532     345


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+++..       +++++.++||.+.+|...................++        .-+...+|++.+
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~  229 (257)
T PRK09242        158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM--------RRVGEPEEVAAA  229 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC--------CCCcCHHHHHHH
Confidence            78999999999988753       689999999999887532110001111101111111        235678999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~  242 (303)
                      ++.++....  ..|+.+.+.++
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            999987532  35777777655

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=148.27  Aligned_cols=218  Identities=14%  Similarity=0.153  Sum_probs=151.6

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY----   87 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   87 (303)
                      ++.+++++++||||+|+||++++++|+++|++|+++.|+.....+... ......++.++.+|++|.+++.+++++    
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            344678999999999999999999999999999999997543222111 111124588999999999988876653    


Q ss_pred             ---cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          88 ---SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        88 ---~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                         .|+|||++|....        ...+..+++|+.++.++.+++..    .+..++|++||.......     .....|
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~~Y  160 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----AGDAVY  160 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----CCccHh
Confidence               5999999996322        12335688899999888866643    566799999998765321     234689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+++..       ++++..++||.+.++.......-...........+.        ..+++.+|++++++.
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~  232 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL--------GRWGRPEEIAGAAVF  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHH
Confidence            99999998877652       689999999999987422110001111101111111        247899999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCc
Q psy4233         226 ACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~  243 (303)
                      ++..+.  ..|+.+.+.++.
T Consensus       233 l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        233 LASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HcCcccCCcCCCEEEECCCc
Confidence            998643  357777776553

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=148.03  Aligned_cols=216  Identities=14%  Similarity=0.079  Sum_probs=148.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+........+.. ....+++++++|+.|.+++.++++      
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3466789999999999999999999999999999999754322211111 111347889999999988876654      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       .+|++||+++....         ...+..+++|+.++..+++++    ++.+..++|++||......     ......|
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y  158 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----GDFQGIY  158 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----CCCCcch
Confidence             37999999985211         122357889999988887766    4445679999998765431     2345789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+++..       +++++.+.||.+..+.......-...........+.        ..+...+|+|++++.
T Consensus       159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~  230 (252)
T PRK07035        159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL--------RRHAEPSEMAGAVLY  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC--------CCcCCHHHHHHHHHH
Confidence            99999999988764       689999999988765321110000111111111221        236789999999999


Q ss_pred             HhcCCC--CCCcEEEEeCC
Q psy4233         226 ACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~  242 (303)
                      ++.+..  ..|+++.+.++
T Consensus       231 l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        231 LASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            997543  36777777654

>PRK12742 oxidoreductase; Provisional

Probab=99.82  E-value=1.6e-18  Score=145.44  Aligned_cols=209  Identities=13%  Similarity=0.143  Sum_probs=146.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi   92 (303)
                      +++++|+||||+|.||++++++|+++|++|+++.|+..+..+.+...   .+++++.+|++|.+++.+.++.   +|++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            56789999999999999999999999999988776543322222111   1367889999999888876653   89999


Q ss_pred             EccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233          93 NLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |++|....        +..+..+++|+.++..+++.+...  +..++|++||.....    .|..+...|+.+|...+.+
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~~Y~~sKaa~~~~  156 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----MPVAGMAAYAASKSALQGM  156 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----CCCCCCcchHHhHHHHHHH
Confidence            99986321        233568889999998887665543  235899999976532    1224567899999999988


Q ss_pred             HHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--CC
Q psy4233         163 VLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD--AA  233 (303)
Q Consensus       163 ~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  233 (303)
                      ++..       ++.++.++||.+..+...........   .....+.        ..+.+.+|+|+++..++....  ..
T Consensus       157 ~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~---~~~~~~~--------~~~~~p~~~a~~~~~l~s~~~~~~~  225 (237)
T PRK12742        157 ARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDM---MHSFMAI--------KRHGRPEEVAGMVAWLAGPEASFVT  225 (237)
T ss_pred             HHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHH---HHhcCCC--------CCCCCHHHHHHHHHHHcCcccCccc
Confidence            8653       68999999999987643211111111   1111111        235789999999999987532  36


Q ss_pred             CcEEEEeCC
Q psy4233         234 GKIYQAVGP  242 (303)
Q Consensus       234 g~~~~i~~~  242 (303)
                      |..+.+.++
T Consensus       226 G~~~~~dgg  234 (237)
T PRK12742        226 GAMHTIDGA  234 (237)
T ss_pred             CCEEEeCCC
Confidence            777777654

>PRK07985 oxidoreductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=151.13  Aligned_cols=215  Identities=12%  Similarity=0.053  Sum_probs=149.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchh--cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++..|+... ..+.+..  .....++.++.+|++|.+++.++++      
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            456799999999999999999999999999987765322 1111111  0112357889999999988776654      


Q ss_pred             -ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|++||+||...         .......+++|+.++..+++++...  .-.++|++||...+...     .....|+.
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----~~~~~Y~a  201 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----PHLLDYAA  201 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----CCcchhHH
Confidence             3799999998531         1233567899999999999988642  12489999999887531     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||++++|.......-...........+.        ..+...+|+|+++++++
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~r~~~pedva~~~~fL~  273 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM--------KRAGQPAELAPVYVYLA  273 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC--------CCCCCHHHHHHHHHhhh
Confidence            999999877653       789999999999988432100000111101111221        23678999999999999


Q ss_pred             cCCC--CCCcEEEEeCCc
Q psy4233         228 KDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~  243 (303)
                      ..+.  ..|+++.+.++.
T Consensus       274 s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        274 SQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             ChhcCCccccEEeeCCCe
Confidence            7533  367888887764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.82  E-value=1.6e-18  Score=145.62  Aligned_cols=205  Identities=17%  Similarity=0.150  Sum_probs=144.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhcc-------cCEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNVV   91 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~v   91 (303)
                      |+|||++|+||++++++|+++|++|++++|+..+......  ......+++++.+|++|.+++.+++.+       +|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999987532211111  111113578999999999988877654       6999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||++|....        ...+..++.|+.++.++++++..    .+.++++++||... ++.      .....|+.+|..
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------~~~~~y~~~k~a  154 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------AGQANYAASKAG  154 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------CCCchhHHHHHH
Confidence            999996422        23356788999999999998865    34569999999754 442      234689999998


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+.+++..       ++.+++++|+.+.++...... .....   ....++.        ..+.+.+|+|++++.++..+
T Consensus       155 ~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~a~~~~~~~~~~  223 (239)
T TIGR01830       155 VIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKK---ILSQIPL--------GRFGTPEEVANAVAFLASDE  223 (239)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHH---HHhcCCc--------CCCcCHHHHHHHHHHHhCcc
Confidence            88766552       789999999988765322111 11111   1111221        23678999999999988543


Q ss_pred             --CCCCcEEEEeCC
Q psy4233         231 --DAAGKIYQAVGP  242 (303)
Q Consensus       231 --~~~g~~~~i~~~  242 (303)
                        ...|++|++.++
T Consensus       224 ~~~~~g~~~~~~~g  237 (239)
T TIGR01830       224 ASYITGQVIHVDGG  237 (239)
T ss_pred             cCCcCCCEEEeCCC
Confidence              347889998654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.8e-19  Score=150.77  Aligned_cols=197  Identities=14%  Similarity=0.067  Sum_probs=137.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      |+|+||||||+||++++++|+++|++|++++|+.....+... ......++.++.+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999987543222211 11122468899999999988887665       4899


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |||++|....        ...+..+++|+.++.++.++    +++.+..++|++||...+..     ......|+.+|..
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~Y~~sKaa  155 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----GPAMSSYNVAKAG  155 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----CCCchHHHHHHHH
Confidence            9999996322        12234677888877776665    45566679999999877652     2345789999998


Q ss_pred             HHHHHHh-------hCCCEEEEeecceeeCCCchhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         159 GEKEVLR-------EFPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       159 ~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+.+.+.       .++++++++||.+.++...... .............        . ..+++++|+|+.++.++++
T Consensus       156 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        156 VVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL--------E-KSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh--------h-cCCCCHHHHHHHHHHHHhC
Confidence            7766544       2689999999999877432111 0000000000000        1 2468999999999999985

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.82  E-value=1.3e-18  Score=146.88  Aligned_cols=212  Identities=14%  Similarity=0.072  Sum_probs=140.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      |++++||||+|+||++++++|+++|++|+++. |+.....+... ......++..+.+|+.|++++.+++++       +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999998754 44322111111 111123588899999999988887654       5


Q ss_pred             CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHHhc-------CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSKEM-------GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      |+|||++|.....         .....+++|+.++..+++++...       ...++|++||...+...   | .....|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---~-~~~~~Y  156 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---P-GEYVDY  156 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---C-Ccccch
Confidence            8999999963211         12357888999988777665432       12469999998664321   1 112469


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+++..       +++++++||+.+|+|....... ...........++        .-..+.+|+|++++.
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~dva~~~~~  227 (247)
T PRK09730        157 AASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPM--------QRGGQPEEVAQAIVW  227 (247)
T ss_pred             HhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHHh
Confidence            99999999877642       7899999999999985321111 1111101111221        113478999999999


Q ss_pred             HhcCC--CCCCcEEEEeCC
Q psy4233         226 ACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~  242 (303)
                      ++...  ...|+.+.+.++
T Consensus       228 ~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        228 LLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             hcChhhcCccCcEEecCCC
Confidence            98753  245777777654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.6e-18  Score=145.81  Aligned_cols=217  Identities=13%  Similarity=0.043  Sum_probs=149.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      .+++++++||||+|.||++++++|+++|++|++++|+.....+.. . ......++..+.+|+.|.+++.++++.     
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999998754322211 1 111123578899999999888876653     


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        .|++||++|....        ...+..+++|+.++..+++++    ++.+..++|++||.........   .....|+
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~~~~~Y~  161 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---LLQAHYN  161 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---CCcchHH
Confidence              6999999996322        233467889999998777765    3344568999999876532111   1246899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++.+++||.+.++....... ...........|+        ..+...+|+|.+++++
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~-~~~~~~~~~~~p~--------~r~~~~~dva~~~~~l  232 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM-VHQTKLFEEQTPM--------QRMAKVDEMVGPAVFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc-hHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999988877663       6899999999998774321111 1111101122221        2357889999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +.+.  ...|+++.+.+|.
T Consensus       233 ~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        233 LSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             cCccccCcCCceEEECcCE
Confidence            8753  2367888877654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.6e-18  Score=145.97  Aligned_cols=194  Identities=13%  Similarity=0.017  Sum_probs=140.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +|++++||||+|.||+.++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++..+++       ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999754322211111 112458899999999998877665       38


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||++|....        ......+++|+.++.++++++    ++.+..++|++||...+..     ......|+.+|
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK  159 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA-----FPQWGAYCVSK  159 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC-----CCCccHHHHHH
Confidence            999999986321        223456788999888877765    4445568999999987753     23357899999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+.       .+++++++|||.+-.|.....           ......    .. ...+..+|+|++++.++.+
T Consensus       160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-----------~~~~~~----~~-~~~~~~~~va~~~~~l~~~  223 (241)
T PRK07454        160 AALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-----------TVQADF----DR-SAMLSPEQVAQTILHLAQL  223 (241)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-----------cccccc----cc-ccCCCHHHHHHHHHHHHcC
Confidence            999987754       279999999999876642110           000000    01 2358999999999999986


Q ss_pred             CC
Q psy4233         230 PD  231 (303)
Q Consensus       230 ~~  231 (303)
                      +.
T Consensus       224 ~~  225 (241)
T PRK07454        224 PP  225 (241)
T ss_pred             Cc
Confidence            64

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.81  E-value=1.8e-18  Score=146.88  Aligned_cols=216  Identities=13%  Similarity=0.122  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.......... .....++.++.+|++|.+++.++++       +
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999998865432111111 1111357889999999998877554       3


Q ss_pred             cCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|++||++|....       ...+..+++|+.++.++++++.    +.+..++|++||......     ..+...|+.+|
T Consensus        89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK  163 (255)
T PRK06113         89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----NINMTSYASSK  163 (255)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----CCCcchhHHHH
Confidence            7999999986321       2223458899999999999885    334459999999876532     23456899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+++..       ++.+.++.||.+..+..... ..........+..++        ..+...+|++++++.++..
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~d~a~~~~~l~~~  234 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITPEIEQKMLQHTPI--------RRLGQPQDIANAALFLCSP  234 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc-cCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHcCc
Confidence            9999988763       57888999998876532210 001111111112221        2367999999999999975


Q ss_pred             CC--CCCcEEEEeCCccc
Q psy4233         230 PD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       230 ~~--~~g~~~~i~~~~~~  245 (303)
                      ..  ..|+.+++.++...
T Consensus       235 ~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        235 AASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             cccCccCCEEEECCCccc
Confidence            32  36889999887543

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-18  Score=145.98  Aligned_cols=215  Identities=14%  Similarity=0.110  Sum_probs=144.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++..++.....+...  ......++..+.+|+.|.+++...+.       
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            346899999999999999999999999999887543322221111  11112347788999999876654331       


Q ss_pred             ------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                            ++|++||+||....        +..+..+++|+.++..+++++...  ...+||++||...+..     .....
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  156 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----LPDFI  156 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----CCCch
Confidence                  58999999995321        112457789999999999877543  2249999999987642     23346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|+.++.+++..       ++++..+.||.+.++....... ...........      ... ..+.+.+|+|+++
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~------~~~-~~~~~~~dva~~~  228 (252)
T PRK12747        157 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTI------SAF-NRLGEVEDIADTA  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhc------Ccc-cCCCCHHHHHHHH
Confidence            8999999999887753       6899999999998774321000 00000000001      011 3468999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCc
Q psy4233         224 VAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +.++....  ..|+.+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        229 AFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHcCccccCcCCcEEEecCCc
Confidence            99987432  367788887653

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.5e-18  Score=147.87  Aligned_cols=217  Identities=14%  Similarity=0.045  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+.....+......   ...++.++.+|++|.+++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999997543222111111   12458899999999988887765      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       .+|++||+||....        +..+..+++|+.++..+++++.    +.+..++|++||...+...     .....|+
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~  159 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----PGCFPYP  159 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----CCchHHH
Confidence             48999999996321        2334578899999988888764    3345689999998765421     2346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH---HHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY---YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .+|...+.+.+..       ++++..++||.+-.+..... ..   ............|.        .-+...+|+|.+
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~va~~  231 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM--------KRIGRPEEVAMT  231 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC--------CCCCCHHHHHHH
Confidence            9999999988764       68899999998876532100 00   00000001111111        235789999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++++...  ...|+...+.+|..+
T Consensus       232 ~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        232 AVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHcCccccccCCcEEEECCCeee
Confidence            99999753  237888888777544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=3.4e-18  Score=143.35  Aligned_cols=208  Identities=15%  Similarity=0.052  Sum_probs=146.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~D~vi~   93 (303)
                      .+++++++||||+|+||+++++.|+++|++|++++|+.....        ..++.++.+|+.++ +.+.+.+..+|+|||
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~   73 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN   73 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence            356789999999999999999999999999999998743211        13588999999987 444445566899999


Q ss_pred             ccccCc---------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          94 LIGREF---------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        94 ~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      ++|...         ....+..+++|+.++.++++++..    .+..++|++||...+...     .....|+.+|...+
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~  148 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----GGGAAYTASKHALA  148 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----CCCcccHHHHHHHH
Confidence            998521         112345788999999999988753    344589999998765421     23468999999988


Q ss_pred             HHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--C
Q psy4233         161 KEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--D  231 (303)
Q Consensus       161 ~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~  231 (303)
                      .+.+..       ++++++++||++.++.......-...........+       . ..+...+|+|++++.++.+.  .
T Consensus       149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~a~~~~~l~s~~~~~  220 (235)
T PRK06550        149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP-------I-KRWAEPEEVAELTLFLASGKADY  220 (235)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC-------c-CCCCCHHHHHHHHHHHcChhhcc
Confidence            877652       68999999999987743210000011110111111       1 34688999999999999753  3


Q ss_pred             CCCcEEEEeCCc
Q psy4233         232 AAGKIYQAVGPK  243 (303)
Q Consensus       232 ~~g~~~~i~~~~  243 (303)
                      ..|+++.+.++.
T Consensus       221 ~~g~~~~~~gg~  232 (235)
T PRK06550        221 MQGTIVPIDGGW  232 (235)
T ss_pred             CCCcEEEECCce
Confidence            367777776653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=149.42  Aligned_cols=154  Identities=12%  Similarity=0.072  Sum_probs=120.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D   89 (303)
                      +++|+||||+|+||++++++|.++|++|++++|+.... +.+..    .+++++.+|++|.+++.++++        .+|
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-AALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            56899999999999999999999999999999975432 22221    258899999999988876654        369


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||+||....        +..+..+++|+.+    +..++..+++.+..+||++||...+.     +......|+.+|+
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~asK~  153 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----PMKYRGAYNASKF  153 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----CCCccchHHHHHH
Confidence            99999986322        1224578889888    55667777777778999999987654     2234578999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGS  181 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~  181 (303)
                      ..+.+.+.       .++++++++||.+-.+
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        154 AIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            99998765       3799999999988765

>PRK08643 acetoin reductase; Validated

Probab=99.81  E-value=3e-18  Score=145.56  Aligned_cols=213  Identities=15%  Similarity=0.072  Sum_probs=145.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++++|++|++++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999754322211111 112458889999999998877665       479


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|||++|....        +..+..+++|+.++..+++++..    .+ ..++|++||...+...     .....|+.+|
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK  156 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----PELAVYSSTK  156 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----CCCchhHHHH
Confidence            99999986322        12245678899988777776643    22 2489999997664321     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHH-------HH-HHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYG-------HM-WRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~-------~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ...+.+.+..       +++++.++||.+.+|...... ...       .+ .......++       . ..+...+|+|
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va  228 (256)
T PRK08643        157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT-------L-GRLSEPEDVA  228 (256)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC-------C-CCCcCHHHHH
Confidence            9988877652       689999999999876321100 000       00 000001111       1 2357899999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .++..++...  ...|+.+.+.++.
T Consensus       229 ~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        229 NCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHhCccccCccCcEEEeCCCe
Confidence            9999999743  3478888887664

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.8e-18  Score=145.02  Aligned_cols=214  Identities=14%  Similarity=0.063  Sum_probs=149.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|+++.|+.....+.... .....+++++.+|+++.+++.++++       
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999975432211111 1112458899999999998888765       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC--------CceEEEEecCccCCCCCCCCC
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG--------VEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                      .+|++||++|....        ......+++|+.++.++++++..    ..        ..++|++||...+..     .
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~  160 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV-----L  160 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----C
Confidence            48999999996321        23446788999999998887642    11        248999999877642     2


Q ss_pred             CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ....+|+.+|...+.+++..       ++++++++||.+++|....... ........+.++.        ..+...+|+
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~p~~~  231 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPR--------KRVGKPEDL  231 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhcCCC--------CCCcCHHHH
Confidence            34578999999999887663       6899999999999875431100 0110001111221        246778999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      ++++.+++...  ...|....+.++
T Consensus       232 ~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        232 DGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHhChhhcCCCCcEEEeCCC
Confidence            99999998743  236766666544

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.81  E-value=2.7e-18  Score=145.49  Aligned_cols=213  Identities=14%  Similarity=0.073  Sum_probs=148.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+++++++||||+|.||.+++++|+++|++|+++.|+..... ..+..  ...++.++.+|++|.+++.++++       
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA--LGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH--cCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999888643221 11111  12468899999999999888765       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||+||....        ...+..+++|+.++..+.+++..    .+ -.++|++||...+...     .....|+
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~  157 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-----IRVPSYT  157 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-----CCCcchH
Confidence            37999999996321        23446788999998888887643    22 2589999998776532     2235899


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+.       .++++..++||.+-.+..................+|.        ..+...+|+|++++++
T Consensus       158 asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~peeva~~~~~L  229 (251)
T PRK12481        158 ASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA--------SRWGTPDDLAGPAIFL  229 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            999999988765       2789999999998765322110000000001112221        2357899999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +...  ...|+.+.+.++
T Consensus       230 ~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        230 SSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             hCccccCcCCceEEECCC
Confidence            9742  336777777665

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.81  E-value=3.2e-18  Score=144.52  Aligned_cols=212  Identities=15%  Similarity=0.123  Sum_probs=144.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++||||+|+||++++++|+++|++|+++.++... ..+..... ....++..+.+|+.|.+++.++++       +
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999886543222 11111111 112347788999999988877664       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ...+..+++|+.++..+.+++    ++.+..++|++||......     ......|+.+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~y~~s  156 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----QFGQTNYSTA  156 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----CCCChhHHHH
Confidence            7999999996421        233467888999877766554    4556679999999765432     1345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       +++++.++||.+.+|.....  ............+       . ..+...+|++++++.++.
T Consensus       157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~v~~~~~~l~~  226 (246)
T PRK12938        157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIP-------V-RRLGSPDEIGSIVAWLAS  226 (246)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCC-------c-cCCcCHHHHHHHHHHHcC
Confidence            99888766552       68999999999987743211  1111111111111       1 346789999999999986


Q ss_pred             CC--CCCCcEEEEeCCc
Q psy4233         229 DP--DAAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~  243 (303)
                      .+  ...|+.+.+.++.
T Consensus       227 ~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        227 EESGFSTGADFSLNGGL  243 (246)
T ss_pred             cccCCccCcEEEECCcc
Confidence            53  2367788887653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2e-18  Score=147.19  Aligned_cols=213  Identities=15%  Similarity=0.095  Sum_probs=147.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       .+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            56789999999999999999999999999999999754322211111  1458899999999998887665       47


Q ss_pred             CEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          89 NVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        89 D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++||++|....       +.....+++|+.++..+++++..   .+-.++|++||.......     .....|+.+|..
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~asKaa  156 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-----TGRWLYPASKAA  156 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----CCCchhHHHHHH
Confidence            999999986321       23346778899999888887653   233589999998764321     234689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+.+.+..       +++++.++||.+..+...... .-...... .....+       . ..+...+|+|++++.++..
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dva~~~~~l~s~  228 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHL-------L-GRVGDPEEVAQVVAFLCSD  228 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCC-------C-CCccCHHHHHHHHHHHcCc
Confidence            99887763       689999999988765321100 00000000 000111       1 2357899999999999975


Q ss_pred             C--CCCCcEEEEeCCc
Q psy4233         230 P--DAAGKIYQAVGPK  243 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~  243 (303)
                      .  ...|+.+.+.++.
T Consensus       229 ~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        229 AASFVTGADYAVDGGY  244 (261)
T ss_pred             cccCccCcEEEECCCe
Confidence            3  2368888887764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.81  E-value=5.3e-18  Score=145.85  Aligned_cols=216  Identities=13%  Similarity=0.110  Sum_probs=149.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+.+++++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.|.+++..+++       
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999999753322211111 112358889999999988877654       


Q ss_pred             ccCEEEEccccCcc-----------------------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCC
Q psy4233          87 YSNVVINLIGREFA-----------------------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADP  139 (303)
Q Consensus        87 ~~D~vi~~a~~~~~-----------------------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~  139 (303)
                      ++|++||++|....                       ......+++|+.++..+++++    ++.+..++|++||...+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            58999999985321                       123356788888887666554    344456899999998875


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCC
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGE  207 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  207 (303)
                      .     ......|+.+|...+.+++..       ++++..++||.+..|.......     ............|      
T Consensus       167 ~-----~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p------  235 (278)
T PRK08277        167 P-----LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP------  235 (278)
T ss_pred             C-----CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC------
Confidence            2     234568999999999888763       6899999999998874321000     0000000001111      


Q ss_pred             ceeeCceeHHHHHHHHHHHhcC-CC--CCCcEEEEeCCc
Q psy4233         208 ETIKQPVYVGDVAAAIVAACKD-PD--AAGKIYQAVGPK  243 (303)
Q Consensus       208 ~~~~~~i~~~Dva~~~~~~~~~-~~--~~g~~~~i~~~~  243 (303)
                       . ..+...+|+|+++++++.. ..  ..|+.+.+.+|.
T Consensus       236 -~-~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        236 -M-GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             -c-cCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence             1 2467899999999999875 22  368888887663

>PRK06196 oxidoreductase; Provisional

Probab=99.81  E-value=3.6e-18  Score=149.53  Aligned_cols=203  Identities=15%  Similarity=0.041  Sum_probs=138.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.....+....   ..+++++.+|++|.+++.++++       ++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---IDGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4568999999999999999999999999999999975432221111   1348899999999998887663       48


Q ss_pred             CEEEEccccCcc------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCC--C-----CCCCCCCCc
Q psy4233          89 NVVINLIGREFA------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNP--P-----TYYISGGSQ  151 (303)
Q Consensus        89 D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~--~-----~~~~~~~~~  151 (303)
                      |+|||+||....      ...+..+++|+.++..++++    +++.+..++|++||.+.....  .     ..+..+...
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  180 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA  180 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHH
Confidence            999999996321      22346788999986666654    445555699999997653211  0     122334467


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHH----HHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGH----MWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      |+.+|...+.+.+..       ++++++++||.+.+|.......-..    ++  .....++     .  ..+...+|+|
T Consensus       181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~-----~--~~~~~~~~~a  251 (315)
T PRK06196        181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWV--DEHGNPI-----D--PGFKTPAQGA  251 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhh--hhhhhhh-----h--hhcCCHhHHH
Confidence            999999998876543       6899999999999885332111000    00  0000111     0  0246789999


Q ss_pred             HHHHHHhcCC
Q psy4233         221 AAIVAACKDP  230 (303)
Q Consensus       221 ~~~~~~~~~~  230 (303)
                      ..++.++..+
T Consensus       252 ~~~~~l~~~~  261 (315)
T PRK06196        252 ATQVWAATSP  261 (315)
T ss_pred             HHHHHHhcCC
Confidence            9999998654

>PRK08017 oxidoreductase; Provisional

Probab=99.81  E-value=1.1e-18  Score=148.09  Aligned_cols=197  Identities=12%  Similarity=0.024  Sum_probs=137.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D   89 (303)
                      +++|+||||+|+||+++++.|+++|++|++++|+.... +....    .+++.+.+|+.|.+++.++++        .+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh-HHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            35899999999999999999999999999999975332 22111    247889999999887766543        368


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHH----HHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARL----ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      .+||++|....        ...+..++.|+.++.++    ++++++.+.+++|++||......     ......|+.+|.
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~sK~  151 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----TPGRGAYAASKY  151 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----CCCccHHHHHHH
Confidence            99999985321        12335778888887765    66666777789999999755432     134578999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..|.+.+.       .++++++++||.+..+.......       .....+....+... +.+++.+|+|+++..+++++
T Consensus       152 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ-------TQSDKPVENPGIAA-RFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc-------hhhccchhhhHHHh-hcCCCHHHHHHHHHHHHhCC
Confidence            99987653       37899999998876442211100       01111112222222 45799999999999999865


Q ss_pred             CC
Q psy4233         231 DA  232 (303)
Q Consensus       231 ~~  232 (303)
                      ..
T Consensus       224 ~~  225 (256)
T PRK08017        224 KP  225 (256)
T ss_pred             CC
Confidence            54

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.7e-18  Score=145.67  Aligned_cols=215  Identities=12%  Similarity=0.010  Sum_probs=149.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|.||.+++++|+++|++|+++.|+.....+..... ....++..+.+|++|++++.++++       
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999999998754322111111 112458889999999998877664       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      .+|++||++|....        ......+++|+.++..+++++..    .+ -.++|++||.......   .......|+
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~~~Y~  162 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN---VPQQVSHYC  162 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC---CCCCccchH
Confidence            58999999986322        12335678999999999888743    22 2379999887653210   001236899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+-.|...........   .....+.        ..+...+|+|++++++
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~---~~~~~~~--------~r~~~p~~va~~~~~L  231 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL---WEPKIPL--------GRLGRPEELAGLYLYL  231 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHH---HHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999988763       68999999999977643211111111   1112221        2367899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+.+.+.+|.
T Consensus       232 ~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        232 ASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             cCcccCCcCCCeEEECCCc
Confidence            9743  2368888887764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.81  E-value=3e-18  Score=143.92  Aligned_cols=182  Identities=15%  Similarity=0.069  Sum_probs=138.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SN   89 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D   89 (303)
                      +.+.+++|+||||+|+||+++++.|+++|+ +|++++|+.....+      ...+++++.+|+.|.+++.++++.   +|
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id   75 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVT   75 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            345677999999999999999999999998 99999997543221      124689999999999999888764   79


Q ss_pred             EEEEcccc-Ccc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGR-EFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~-~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|||++|. ...        ......+++|+.++.++++++.    ..+..++|++||...+..     ..+...|+.+|
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----~~~~~~y~~sK  150 (238)
T PRK08264         76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----FPNLGTYSASK  150 (238)
T ss_pred             EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----CCCchHhHHHH
Confidence            99999997 211        2234567889999999998865    345668999999877652     23456899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ..++.+.+..       +++++++||+.+.++...              ...         ...+..+|+++.++..+..
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~--------------~~~---------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA--------------GLD---------APKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc--------------cCC---------cCCCCHHHHHHHHHHHHhC
Confidence            9999877653       689999999988765311              000         1247788999999988874

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=2.2e-18  Score=139.50  Aligned_cols=202  Identities=20%  Similarity=0.185  Sum_probs=143.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------ccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~   88 (303)
                      ...|.++|||||+.||.++++.|.+.|++|++..|+.+...+.....+. ..+..+..|++|.+++.+++       .++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3467899999999999999999999999999999986533332222222 45889999999998866544       348


Q ss_pred             CEEEEccccC--------ccccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGRE--------FATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||..        ..+.+..++++|+.+..+..+++-    +.+..++|.+||......     ....+.|+.+|
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~-----y~~~~vY~ATK  157 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP-----YPGGAVYGATK  157 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc-----CCCCccchhhH
Confidence            9999999962        224566899999999999888773    334459999999876431     13347899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      +.+.++....       +++++.+-||.+-..-.+..+.-..    ..+.-.++    .. ..++..+|+|+++++++.+
T Consensus       158 ~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~----~~~~~~~y----~~-~~~l~p~dIA~~V~~~~~~  228 (246)
T COG4221         158 AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD----DERADKVY----KG-GTALTPEDIAEAVLFAATQ  228 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch----hhhHHHHh----cc-CCCCCHHHHHHHHHHHHhC
Confidence            9998876552       6889999998885321110000000    00000100    11 4679999999999999998


Q ss_pred             CCC
Q psy4233         230 PDA  232 (303)
Q Consensus       230 ~~~  232 (303)
                      |..
T Consensus       229 P~~  231 (246)
T COG4221         229 PQH  231 (246)
T ss_pred             CCc
Confidence            764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.2e-18  Score=145.30  Aligned_cols=218  Identities=10%  Similarity=0.018  Sum_probs=148.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-C-CCCceEEEecCCCCHHHHHHHhc------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-G-DLGQVLFQPYHPRNDDEIRKAIK------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~~------~   87 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+..+..+..... . ...+++++.+|++|++++.++++      .
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            56789999999999999999999999999999999754322111111 0 12458899999999998887765      3


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||++|....        +.....+++|+.+...++++    +++.+..++|++||......     ......|+.+
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----~~~~~~y~as  160 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----IPNIALSNVV  160 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----CCcchhhHHH
Confidence            8999999986321        23345677887766555544    44555569999999876542     1223579999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH---------HHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY---------YGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      |...+.+.+..       |+++..+.||.+..+.......         ...........+|.        ..+...+|+
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dv  232 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL--------GRLGEPEEI  232 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc--------ccCcCHHHH
Confidence            99999877763       6889999999887552110000         00000001111221        236789999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      |+++++++..+  ...|+.+.+.++...|
T Consensus       233 a~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        233 GYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHhcchhcCccCceEEECCCcccc
Confidence            99999998743  2368888887776554

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.5e-18  Score=145.30  Aligned_cols=218  Identities=13%  Similarity=0.024  Sum_probs=144.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----h-cCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----L-CGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~-~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +++++++||||+|+||.++++.|+++|++|+++.++.....+...    . .....+++++++|++|++++.+++.    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999997777665332211111    0 0111358899999999999887665    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEe-cC-ccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHIS-AL-NADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~S-s~-~~~~~~~~~~~~~~~~  151 (303)
                         ++|++||+||....        ...+..+++|+.++..+++++...  ...++++++ |. +.+.       .....
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-------~~~~~  158 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-------PFYSA  158 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-------CCccc
Confidence               47999999996211        223467889999999999988643  123566653 33 3232       23478


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|..+|.+.+..       +++++.++||.+.++............. .. . ......... ..+.+.+|+|+++.
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~-~-~~~~~~~~~-~~~~~~~dva~~~~  234 (257)
T PRK12744        159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY-HK-T-AAALSPFSK-TGLTDIEDIVPFIR  234 (257)
T ss_pred             chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc-cc-c-ccccccccc-CCCCCHHHHHHHHH
Confidence            999999999988774       5899999999998763211000000000 00 0 000000111 24789999999999


Q ss_pred             HHhcCCC-CCCcEEEEeCCcc
Q psy4233         225 AACKDPD-AAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~~-~~g~~~~i~~~~~  244 (303)
                      .+++... ..|+++++.++..
T Consensus       235 ~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        235 FLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             HhhcccceeecceEeecCCcc
Confidence            9998432 2588898887643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=9.2e-18  Score=141.86  Aligned_cols=212  Identities=14%  Similarity=0.075  Sum_probs=140.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+||||+|+||+.+++.|+++|++|+++.+++....+...  ......++.++.+|+.|.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999877654433222111  11112468899999999988876654       48


Q ss_pred             CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHH-hcCC------ceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSK-EMGV------EKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~-~~~~------~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      |+|||++|.....         .....+.+|+.++..+++++. ....      .++|++||........    .....|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----~~~~~Y  157 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----NEYVDY  157 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC----CCCccc
Confidence            9999999863221         113457899999888875443 2221      3699999876543211    122579


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+++..       ++++++++||.+..|........ ..........+.        .-+...+|+|++++.
T Consensus       158 ~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~e~va~~~~~  228 (248)
T PRK06947        158 AGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTPL--------GRAGEADEVAETIVW  228 (248)
T ss_pred             HhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCCC--------CCCcCHHHHHHHHHH
Confidence            99999999776552       68999999999988742210000 000001111111        124788999999999


Q ss_pred             HhcCCC--CCCcEEEEeCC
Q psy4233         226 ACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~  242 (303)
                      ++.++.  ..|+.+.+.++
T Consensus       229 l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        229 LLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HcCccccCcCCceEeeCCC
Confidence            987643  36777777554

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.80  E-value=6.7e-18  Score=143.19  Aligned_cols=215  Identities=16%  Similarity=0.107  Sum_probs=148.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      +++++++||||+|+||.+++++|+++|++|+++.|+.....+.... .....+++++.+|++|.+++.+++++       
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999975432211111 11124588999999999888876653       


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||++|....         +.....+++|+.++..+++++    .+.+..++|++||...+..     ......|+.
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~~  159 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-----APKMSIYAA  159 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-----CCCCchhHH
Confidence            5999999986321         123456789999887766654    3344568999999887653     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..       ++++..+.||.+-.+..... ..............+.        ..+...+|+|+.++++
T Consensus       160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~ia~~~~~l  231 (253)
T PRK06172        160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV--------GRIGKVEEVASAVLYL  231 (253)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC--------CCccCHHHHHHHHHHH
Confidence            999999887663       58889999998866532211 0001111101111111        2357899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +.+.  ...|+.+.+.++.
T Consensus       232 ~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        232 CSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             hCccccCcCCcEEEECCCc
Confidence            9753  3478888887764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-17  Score=142.72  Aligned_cols=218  Identities=15%  Similarity=0.072  Sum_probs=151.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      +.+.+++++||||+|.||.+++++|+++|++|+++.|+.....+..... ....++.++.+|++|.+++.+++..     
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3456789999999999999999999999999999988754332221111 1123588999999999988877643     


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        +|++||++|....        +.....+++|+.++..+.+++.    +.+..+||++||......     ......|+
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  160 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-----RETVSAYA  160 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-----CCCCccHH
Confidence              7999999996322        2234567789988887777664    345569999999754321     13457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHH------HHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYY------GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      .+|...+.+.+..       ++.++.++||.+..+........      ...........+       . ..+...+|+|
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva  232 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-------A-ARWGDPEDLA  232 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-------c-cCCcCHHHHH
Confidence            9999999888764       68999999999988743221100      000000000111       1 2367889999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ..++.++...  ...|+.+.+.++..
T Consensus       233 ~~~~~l~~~~~~~~~g~~~~~~gg~~  258 (265)
T PRK07097        233 GPAVFLASDASNFVNGHILYVDGGIL  258 (265)
T ss_pred             HHHHHHhCcccCCCCCCEEEECCCce
Confidence            9999999752  34677887776643

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.5e-18  Score=143.71  Aligned_cols=215  Identities=13%  Similarity=0.051  Sum_probs=147.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||+++++.|+++|++|++++|+.. ..+... ......++.++.+|+.|.+++.++++       .
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999998753 111111 11112357889999999998887765       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ...+..+++|+.++..+++++..    .+..++|++||......    +......|+.+
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~~Y~~s  158 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----ADPGETAYALT  158 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----CCCCcchHHHH
Confidence            7999999996322        12234688999999998887653    34568999998765321    11234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh------HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR------YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      |...+.+++..       +++++.++||.+.+|......      .....+.......|       . ..+...+|+|++
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~~va~~  230 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP-------L-RRLADPLEVGEL  230 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC-------C-CCCCCHHHHHHH
Confidence            99999888763       588999999999876321110      00011111111111       1 235799999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +..++...  ...|+.+.+.++.
T Consensus       231 ~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        231 AAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHcCchhcCCcCceEeECCCc
Confidence            99988643  3467777776663

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-17  Score=141.68  Aligned_cols=210  Identities=12%  Similarity=0.072  Sum_probs=143.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++|+||||+|+||.+++++|+++|++|++++|+...........    +.+++.+|+.|.+++.++++       ++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999754322111111    13678999999998887775       47


Q ss_pred             CEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCc-cCCCCCCCCCCCCCchh
Q psy4233          89 NVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALN-ADPNPPTYYISGGSQFY  153 (303)
Q Consensus        89 D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~-~~~~~~~~~~~~~~~y~  153 (303)
                      |+|||++|....          ...+..+++|+.++..+++++.    +.+..++|++||.. .++..     .....|+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----~~~~~Y~  155 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----TSQISYT  155 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----CCCcchH
Confidence            999999986321          1134677889998887777653    34455899998864 44421     2346799


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh-h-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL-R-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      .+|+..+.+.+.       .+++++.++||.+.+|..... . ......+ ....++       . ..+.+.+|+|+++.
T Consensus       156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~-------~-~~~~~~~~~a~~~~  226 (255)
T PRK06057        156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAAR-RLVHVP-------M-GRFAEPEEIAAAVA  226 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHH-HHhcCC-------C-CCCcCHHHHHHHHH
Confidence            999877766653       269999999999988743211 0 0000000 011111       1 24789999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCc
Q psy4233         225 AACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .++...  ...|+.+.+.++.
T Consensus       227 ~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        227 FLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHhCccccCccCcEEEECCCe
Confidence            888653  2357777776653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.2e-18  Score=144.82  Aligned_cols=216  Identities=14%  Similarity=0.077  Sum_probs=147.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+... ......++.++.+|++|++++.+++++     
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44567899999999999999999999999999999997543221111 111123578899999999988876643     


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                        +|++||++|....        ......+++|+.++.++++++...   .-.++|++||......     ......|+.
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----~~~~~~Y~a  159 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----MPMQAHVCA  159 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----CCCccHHHH
Confidence              6999999975221        223456789999999999887642   1258999999866431     133468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH-HHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG-HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+++..       +++++.++|+.+.+.... ..... ..... .....+       . ..+...+|+|++++.
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~-~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~  230 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM-ARLAPSPELQAAVAQSVP-------L-KRNGTKQDIANAALF  230 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH-hhcccCHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHH
Confidence            999999988763       578899999988642110 00000 00000 111112       1 346789999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCc
Q psy4233         226 ACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~  243 (303)
                      ++....  ..|..+.+.++.
T Consensus       231 l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        231 LASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HcChhhcCccCCEEEECCCc
Confidence            997532  367777777764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.5e-17  Score=139.62  Aligned_cols=208  Identities=15%  Similarity=0.124  Sum_probs=142.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      +++++|+||||+|+||+++++.|+++|++|++++|++..............+++++.+|+.|.+++.+++++       +
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999997543222111111223588999999999888776543       5


Q ss_pred             CEEEEccccCcc------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          89 NVVINLIGREFA------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        89 D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      |.+||+++....      ......++.|+.+...+++.+...  .-.++|++||......    +..+...|+.+|...+
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~~Y~~sK~~~~  158 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----ASPDQLSYAVAKAGLA  158 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----CCCCchHHHHHHHHHH
Confidence            999999985322      112345678888877777776542  1247999998765321    1133467999999888


Q ss_pred             HHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--
Q psy4233         161 KEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD--  231 (303)
Q Consensus       161 ~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  231 (303)
                      .+++.       .+++++++||++++++......     +  .  ....     .. ..++..+|++++++.++..+.  
T Consensus       159 ~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-----~--~--~~~~-----~~-~~~~~~~~va~~~~~~~~~~~~~  223 (238)
T PRK05786        159 KAVEILASELLGRGIRVNGIAPTTISGDFEPERN-----W--K--KLRK-----LG-DDMAPPEDFAKVIIWLLTDEADW  223 (238)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-----h--h--hhcc-----cc-CCCCCHHHHHHHHHHHhcccccC
Confidence            76654       2799999999999987432110     0  0  0110     01 235788999999999997533  


Q ss_pred             CCCcEEEEeCC
Q psy4233         232 AAGKIYQAVGP  242 (303)
Q Consensus       232 ~~g~~~~i~~~  242 (303)
                      ..|..+.+.++
T Consensus       224 ~~g~~~~~~~~  234 (238)
T PRK05786        224 VDGVVIPVDGG  234 (238)
T ss_pred             ccCCEEEECCc
Confidence            35767777554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.79  E-value=1.6e-17  Score=140.89  Aligned_cols=213  Identities=14%  Similarity=0.076  Sum_probs=148.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+.+++++||||+|.||.+++++|+++|++|++++|..... .+.+..  ...++..+++|++|.+++.++++       
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA--LGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35678999999999999999999999999999887754321 111111  12358889999999988887765       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||+||....        ......+++|+.++.++++++...    + -.++|++||...+...     .....|+
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~  159 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-----IRVPSYT  159 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----CCCcchH
Confidence            47999999986321        234578899999999988887432    2 2489999998776532     2235899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+-.+.......-....+.....+|.        .-+...+|+|+.++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~eva~~~~~l  231 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA--------GRWGLPSDLMGPVVFL  231 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999887653       688999999999866322110000000001112221        2367889999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +...  ...|+.+.+.++
T Consensus       232 ~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        232 ASSASDYINGYTIAVDGG  249 (253)
T ss_pred             hCccccCccCcEEEECCC
Confidence            9753  236777776554

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.6e-18  Score=145.44  Aligned_cols=195  Identities=14%  Similarity=-0.027  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D   89 (303)
                      |++++||||||+||++++++|+++|++|++++|+.....+ +.......+++++.+|++|.+++.++++        ++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            4789999999999999999999999999999997543222 1111112468999999999988887654        369


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||+||....        ...+..+++|+.++.++++++.    ..+..++|++||.......     .....|+.+|.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~Y~~sKa  154 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ-----PGLAVYSATKF  154 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC-----CCchhhHHHHH
Confidence            99999996322        2234678999999999988874    3445689999997554321     23468999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+..       +++++.++||.+..+.......  ...  . ...      ... .-.+..+|+|++++.+++.+
T Consensus       155 a~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~--~-~~~------~~~-~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        155 AVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN--EVD--A-GST------KRL-GVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc--hhh--h-hhH------hhc-cCCCCHHHHHHHHHHHHhCC
Confidence            988877663       6899999999887543221000  000  0 000      011 12367799999999999743

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.79  E-value=6.4e-18  Score=143.92  Aligned_cols=217  Identities=13%  Similarity=0.056  Sum_probs=142.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcC--CCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCG--DLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      .++++++++||||++.||.+++++|+++|++|+++.|+..+..+... ...  ...++.++.+|++|++++.++++    
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678899999999999999999999999999888765443322211 111  12358899999999988887664    


Q ss_pred             ---ccCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA--------------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                         ++|++||+||....              ......+++|+.+...+.+++    ++.+..+||++||......     
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  158 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY-----  158 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-----
Confidence               37999999974210              112245666776655554444    3344469999999765431     


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      ......|+.+|+.++.+++..       ++++..+.||.+-.+...................|.        ..+...+|
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--------~r~~~p~~  230 (260)
T PRK08416        159 IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL--------NRMGQPED  230 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC--------CCCCCHHH
Confidence            123468999999999988763       688999999888654211100001111001111111        23678999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +|.+++.++...  ...|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            999999998743  2367777776654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.9e-18  Score=143.30  Aligned_cols=215  Identities=13%  Similarity=0.074  Sum_probs=149.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+||||+|+||..++++|+++|++ |+++.|+........... ....++.++.+|+++++++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999988 999988743322111111 112457889999999998887664       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||++|....        ......+++|+.++.++++++..    .+ ..++|++||...+...     .....|+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~~Y~  158 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----PFLAAYC  158 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----CCcchhH
Confidence            47999999986321        12235688999999999887743    22 2479999998876532     2346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-h----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-R----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      .+|...|.+.+..       ++.++.++|+.++++..... .    ....+........+       . ..+++.+|+|+
T Consensus       159 ~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~a~  230 (260)
T PRK06198        159 ASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-------F-GRLLDPDEVAR  230 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-------c-cCCcCHHHHHH
Confidence            9999999988753       57889999999998753211 0    00111111111111       1 34689999999


Q ss_pred             HHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         222 AIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       222 ~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +++.++....  ..|+.+.+.++.
T Consensus       231 ~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        231 AVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHcChhhCCccCceEeECCcc
Confidence            9999986432  368888887654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.9e-18  Score=145.39  Aligned_cols=194  Identities=14%  Similarity=0.058  Sum_probs=138.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.|.+++.++++      
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4456789999999999999999999999999999999753321111111 112357889999999998888776      


Q ss_pred             -ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+||....          ......+++|+.++.++++++    ++.+..++|++||.+++...  .  .....
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~--p~~~~  191 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--S--PLFSV  191 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--C--CCcch
Confidence             58999999986321          112356788988887777765    35566799999998765421  1  23468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|+..+.+++..       +++++.++||.+-.+....           ....       .. ...++.+++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~-----------~~~~-------~~-~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP-----------TKAY-------DG-LPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc-----------cccc-------cC-CCCCCHHHHHHHHH
Confidence            999999998877653       6889999998776553210           0000       01 22478999999999


Q ss_pred             HHhcCC
Q psy4233         225 AACKDP  230 (303)
Q Consensus       225 ~~~~~~  230 (303)
                      .+++++
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            999853

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.8e-18  Score=142.72  Aligned_cols=188  Identities=13%  Similarity=0.030  Sum_probs=137.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcc----cCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKY----SNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~v   91 (303)
                      ||+++||||+|+||.++++.|+++|++|++++|+.....+.....  ....+++++++|+.|.+++.+++++    +|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            579999999999999999999999999999999764332211110  1124689999999999988877654    6999


Q ss_pred             EEccccCccc--------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          92 INLIGREFAT--------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        92 i~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      ||++|.....        .....+++|+.++.++++++..    .+..++|++||.......     .....|+.+|...
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~  155 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----ASNYVYGSAKAAL  155 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----CCCcccHHHHHHH
Confidence            9999853221        1235678999999998887653    456799999998654321     2346799999998


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      +.+.+..       ++++..++|+.++++...           . ...+      .  ...++.+|+|++++..+.++
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-----------~-~~~~------~--~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-----------G-LKLP------G--PLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcccChhhh-----------c-cCCC------c--cccCCHHHHHHHHHHHHhCC
Confidence            8877653       689999999999876211           0 0111      0  12578999999999999854

>PRK08589 short chain dehydrogenase; Validated

Probab=99.79  E-value=1.5e-17  Score=142.56  Aligned_cols=213  Identities=15%  Similarity=0.060  Sum_probs=146.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|.||.+++++|+++|++|+++.|+ ....+..... ....++.++.+|++|.+++..+++       .
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997 3322211111 112358899999999988877654       3


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....         ...+..+++|+.++..+++++.    +.+ .++|++||...+...     .....|+.
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~~~~~Y~a  156 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD-----LYRSGYNA  156 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-----CCCchHHH
Confidence            7999999986321         1123566788888877766653    334 589999998776421     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-h----HHHHHHHh-hhcceeeecCCCceeeCceeHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-R----YYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~----~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      +|...+.+++..       +++++.+.||.+..+..... .    ........ .....|       . ..+...+|+|+
T Consensus       157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~  228 (272)
T PRK08589        157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-------L-GRLGKPEEVAK  228 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-------C-CCCcCHHHHHH
Confidence            999999988763       68999999999876632210 0    00000000 000111       1 23578999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +++.++...  ...|+.+.+.++.
T Consensus       229 ~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        229 LVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCc
Confidence            999998743  3367788887664

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.78  E-value=3.2e-18  Score=150.32  Aligned_cols=166  Identities=13%  Similarity=0.036  Sum_probs=120.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++.      
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            346789999999999999999999999999999999754322211111 1123588999999999988877653      


Q ss_pred             -cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCC----C------
Q psy4233          88 -SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPN----P------  141 (303)
Q Consensus        88 -~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~----~------  141 (303)
                       +|+|||+||....         +..+..+++|+.++.++++++..    .+  ..++|++||...+..    .      
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence             8999999995321         22346789999999988887753    22  359999999765321    0      


Q ss_pred             --------------------CCCCCCCCCchhHHHHHHHHHHHh----h----CCCEEEEeecceee
Q psy4233         142 --------------------PTYYISGGSQFYRTKYQGEKEVLR----E----FPEATIFRPSDMYG  180 (303)
Q Consensus       142 --------------------~~~~~~~~~~y~~~K~~~e~~~~~----~----~~~~~ilrp~~~~G  180 (303)
                                          +..+..+...|+.+|...+.+.+.    +    ++.++.++||++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                                012334567899999877554433    2    58899999999985

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-17  Score=140.93  Aligned_cols=187  Identities=16%  Similarity=0.151  Sum_probs=133.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccc----cchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVR----DLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +.++|+||||+|.||++++++|+++| ++|++++|++....+    .++.. ...+++++.+|+.|.+++.+.++     
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            35789999999999999999999995 899999998654222    11111 12368999999999887655443     


Q ss_pred             -ccCEEEEccccCccc-----cc---hhhhhhhcchHHH----HHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFAT-----KN---FTIADANVEIPAR----LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||++|.....     ..   ...+++|+.++..    ++.++++.+..++|++||...+..     ......|+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-----~~~~~~Y~  160 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-----RRSNFVYG  160 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC-----CCCCcchH
Confidence             599999999874221     11   1357888887766    566667777789999999876431     12346799


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|+....+.+.       .++++++++||.+..+...           .....          ...+..+|+|+.++..
T Consensus       161 ~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~----------~~~~~~~~~A~~i~~~  219 (253)
T PRK07904        161 STKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-----------HAKEA----------PLTVDKEDVAKLAVTA  219 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-----------cCCCC----------CCCCCHHHHHHHHHHH
Confidence            999988765443       3799999999999865221           00000          1137899999999999


Q ss_pred             hcCC
Q psy4233         227 CKDP  230 (303)
Q Consensus       227 ~~~~  230 (303)
                      +.++
T Consensus       220 ~~~~  223 (253)
T PRK07904        220 VAKG  223 (253)
T ss_pred             HHcC
Confidence            9864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=3.6e-17  Score=139.39  Aligned_cols=214  Identities=15%  Similarity=0.084  Sum_probs=144.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|.||.+++++|+++|+.|+++.|+..+......  ......++.++.+|++|.+++.++++       
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999988885433222111  11112457889999999988877654       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      .+|++||++|....        ...+..+++|+.++..++++    +++.+ -.++|++||...+.     +......|+
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----~~~~~~~Y~  159 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----PWPLFVHYA  159 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----CCCCCcccH
Confidence            37999999996322        22335678888777655544    45444 35899999976543     223457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      .+|...+.+.+..       +++++.++||.+..|.... ... ...........+.        ..+...+|+|+++.+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~va~~~~~  230 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIPM--------GYIGKPEEIAAVAAW  230 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHHH
Confidence            9998887766553       6899999999998774321 000 0011101112221        246789999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCc
Q psy4233         226 ACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++...  ...|+.+.+.++.
T Consensus       231 l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        231 LASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HcCcccCCccCcEEEECCCc
Confidence            98753  2367677776654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.78  E-value=1.8e-17  Score=139.51  Aligned_cols=210  Identities=15%  Similarity=0.121  Sum_probs=143.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      ++++||||+|+||.++++.|+++|++|+++.|+.....+.. ... ....++.++.+|+.|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            47999999999999999999999999999988433222111 111 112358899999999988876654       379


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||++|....        ......++.|+.++..+.++    +++.+.+++|++||.......     .....|+.+|.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~~~y~~sk~  155 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----FGQTNYSAAKA  155 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----CCcchhHHHHH
Confidence            99999986321        12345677888887775544    455667799999997654321     23467999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+++..       +++++.++|+.+.+|......  ...........+.        ..+...+|+++++..++..+
T Consensus       156 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       156 GMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPV--------GRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHcCch
Confidence            887766553       689999999999887533211  1111111111121        23567899999998888653


Q ss_pred             --CCCCcEEEEeCCc
Q psy4233         231 --DAAGKIYQAVGPK  243 (303)
Q Consensus       231 --~~~g~~~~i~~~~  243 (303)
                        ...|+.+.+.++.
T Consensus       226 ~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       226 AGYITGATLSINGGL  240 (242)
T ss_pred             hcCccCCEEEecCCc
Confidence              2468888887764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.78  E-value=2e-17  Score=141.30  Aligned_cols=209  Identities=12%  Similarity=0.054  Sum_probs=147.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||.++++.|+++|++|++++|+.....        ..++.++.+|++|++++.++++       
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3466789999999999999999999999999999998754321        1358889999999998887664       


Q ss_pred             ccCEEEEccccCcc-----------------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCC
Q psy4233          87 YSNVVINLIGREFA-----------------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        87 ~~D~vi~~a~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      .+|+|||+||....                 +..+..+++|+.++..+++++...    +..++|++||...+...    
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  152 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS----  152 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----
Confidence            37999999985321                 122357889999999999888642    33589999998775421    


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchh--hHH--------HHHHHhhhc--ceeeecC
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFL--RYY--------GHMWRHVFR--KLAVYKK  205 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~--~~~--------~~~~~~~~~--~~~~~~~  205 (303)
                       .....|+.+|...+.+++..       ++++..++||.+. .+.....  ...        .........  ..|+   
T Consensus       153 -~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---  228 (266)
T PRK06171        153 -EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL---  228 (266)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC---
Confidence             23478999999999887763       6899999999874 2211100  000        000000000  1121   


Q ss_pred             CCceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         206 GEETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       206 ~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                           ..+...+|+|.++.+++....  ..|+++++.++.
T Consensus       229 -----~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        229 -----GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             -----CCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence                 235788999999999987532  367788876653

>KOG1203|consensus

Probab=99.78  E-value=1.1e-17  Score=146.24  Aligned_cols=236  Identities=17%  Similarity=0.030  Sum_probs=152.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH-HHhcc----cC
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR-KAIKY----SN   89 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~----~D   89 (303)
                      ++++++|||+||||.+|+.+++.|+++|+.|++++|+..+..+.+...........+..|.....+.. .+...    ..
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            34577999999999999999999999999999999987766555442222344555666555443333 23222    34


Q ss_pred             EEEEccccCccc-cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhC
Q psy4233          90 VVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREF  167 (303)
Q Consensus        90 ~vi~~a~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~  167 (303)
                      +++-+++..... ....-..+.+.+++|+++||+.+|++|+|++|+++......+.+..- ...+..+|+.+|+++++.+
T Consensus       156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg  235 (411)
T KOG1203|consen  156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG  235 (411)
T ss_pred             eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence            666666543222 12234567899999999999999999999999888765432221111 2345589999999999999


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCH
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~  247 (303)
                      ++++|+|++...-+.........     ........+++..   ..+...|+|+.++.++.++...++.+......+-.-
T Consensus       236 l~ytiIR~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gp  307 (411)
T KOG1203|consen  236 LPYTIIRPGGLEQDTGGQREVVV-----DDEKELLTVDGGA---YSISRLDVAELVAKALLNEAATFKKVVELVLKPEGP  307 (411)
T ss_pred             CCcEEEeccccccCCCCcceecc-----cCccccccccccc---eeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCC
Confidence            99999999977753222111100     1111111122221   258999999999999998777665554444333333


Q ss_pred             HHHHHHHHHHh
Q psy4233         248 SELLDWFHVVM  258 (303)
Q Consensus       248 ~e~~~~i~~~~  258 (303)
                      ....+.+.+..
T Consensus       308 g~~~~~l~~~~  318 (411)
T KOG1203|consen  308 GRPYKVLLELF  318 (411)
T ss_pred             CccHHHHHhhc
Confidence            33333333333

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=140.79  Aligned_cols=185  Identities=14%  Similarity=0.045  Sum_probs=137.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc----cCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY----SNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~vi~   93 (303)
                      |++++||||+|+||.+++++|+++|++|++++|+... .+.+..  ...+++++.+|++|.+++.+++++    +|.+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV-LDELHT--QSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHH--hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            4689999999999999999999999999999997432 222211  124588999999999999988875    589999


Q ss_pred             ccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233          94 LIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        94 ~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      ++|....        +..+..+++|+.++.++++++...  +..++|++||......     ......|+.+|..++.+.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~  152 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-----LPRAEAYGASKAAVAYFA  152 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-----CCCCchhhHHHHHHHHHH
Confidence            9974211        112357899999999999988753  2357999988654321     123468999999999887


Q ss_pred             Hh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         164 LR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       164 ~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      +.       .++++++++||.+++|.....            ...       . ...+..+|+|+.++..++.+
T Consensus       153 ~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~------------~~~-------~-~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        153 RTLQLDLRPKGIEVVTVFPGFVATPLTDKN------------TFA-------M-PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHhcCceEEEEeCCcCCCCCcCCC------------CCC-------C-CcccCHHHHHHHHHHHHhcC
Confidence            54       378999999999998743210            000       0 11478999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=146.93  Aligned_cols=206  Identities=13%  Similarity=0.019  Sum_probs=140.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++|+||||+|.||.+++++|+++|++|++++|+.....+.... .....++.++.+|++|.+++.++++       
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            35578999999999999999999999999999999975432211111 1112458899999999999887654       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHH----HHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPAR----LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      .+|++||++|....        +..+..+++|+.+..+    ++..+++.+..+||++||...+...     .....|+.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~a  159 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-----PLQSAYCA  159 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----CcchHHHH
Confidence            48999999986322        1223566777666655    4444555555799999999887531     23468999


Q ss_pred             HHHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+..         ++.+++++|+.+..|....   .....  .....       .. ..+.+.+|+|++++.
T Consensus       160 sK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~---~~~~~--~~~~~-------~~-~~~~~pe~vA~~i~~  226 (334)
T PRK07109        160 AKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW---ARSRL--PVEPQ-------PV-PPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh---hhhhc--ccccc-------CC-CCCCCHHHHHHHHHH
Confidence            999988766542         4789999999887663211   10000  00000       11 245789999999999


Q ss_pred             HhcCCCCCCcEEEEeC
Q psy4233         226 ACKDPDAAGKIYQAVG  241 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~  241 (303)
                      ++.++   ...+.+.+
T Consensus       227 ~~~~~---~~~~~vg~  239 (334)
T PRK07109        227 AAEHP---RRELWVGG  239 (334)
T ss_pred             HHhCC---CcEEEeCc
Confidence            99864   23455543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=4.4e-17  Score=136.73  Aligned_cols=206  Identities=15%  Similarity=0.113  Sum_probs=144.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      +++++||||+|.||++++++|+++|++|++++|+.....+.+..    .+++++.+|+.|.+++.+++.       ++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            57999999999999999999999999999999976443222221    237889999999988776553       3799


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +||++|....        ......+++|+.++..+.+++..    .+  ..++|++||......     ......|+.+|
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~~~~Y~asK  152 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----SDKHIAYAASK  152 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----CCCCccHHHHH
Confidence            9999986321        12346788899988877666543    23  358999998765421     12346899999


Q ss_pred             HHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         157 YQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       157 ~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ...+.+++.+      ++++..+.||.+..+.... ......   .....++        .-+...+|+|+++.+++...
T Consensus       153 aal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~~---~~~~~~~--------~~~~~~~~va~~~~~l~~~~  220 (236)
T PRK06483        153 AALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQK---ALAKSLL--------KIEPGEEEIIDLVDYLLTSC  220 (236)
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHHH---HhccCcc--------ccCCCHHHHHHHHHHHhcCC
Confidence            9999988764      4788889999875332111 111100   1111121        11457899999999999866


Q ss_pred             CCCCcEEEEeCCcc
Q psy4233         231 DAAGKIYQAVGPKR  244 (303)
Q Consensus       231 ~~~g~~~~i~~~~~  244 (303)
                      ...|+++.+.++..
T Consensus       221 ~~~G~~i~vdgg~~  234 (236)
T PRK06483        221 YVTGRSLPVDGGRH  234 (236)
T ss_pred             CcCCcEEEeCcccc
Confidence            56788888877643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=4.5e-17  Score=138.40  Aligned_cols=210  Identities=14%  Similarity=0.071  Sum_probs=145.6

Q ss_pred             cCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcc--------ccc--c-h-hcCCCCceEEEecCCCCHHH
Q psy4233          15 SFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYD--------VRD--L-R-LCGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        15 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~--~-~-~~~~~~~~~~~~~Dl~d~~~   80 (303)
                      ++++++|+||||||  .||.+++++|+++|++|+++.|++.+.        ...  + . ......+++++.+|+++.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            45678999999996  699999999999999999999873211        000  0 0 00112358999999999988


Q ss_pred             HHHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCC
Q psy4233          81 IRKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNP  141 (303)
Q Consensus        81 ~~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~  141 (303)
                      +..+++       .+|+|||++|....        ...+..+++|+.++..+++++...    +..++|++||...+.. 
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-  160 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP-  160 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC-
Confidence            776554       37999999986322        123456889999999999987542    3458999999877652 


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCce
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                          ......|+.+|...+.+++..       +++++.++||.+..+...  ......   .....+      .  ..+.
T Consensus       161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~--~~~~~~---~~~~~~------~--~~~~  223 (256)
T PRK12748        161 ----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT--EELKHH---LVPKFP------Q--GRVG  223 (256)
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC--hhHHHh---hhccCC------C--CCCc
Confidence                233468999999999987653       689999999987755322  111100   001111      0  1245


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCcEEEEeCC
Q psy4233         215 YVGDVAAAIVAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~~--~~g~~~~i~~~  242 (303)
                      ..+|+|+++..++....  ..|+.+++.++
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            68999999998887532  35788888665

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.1e-17  Score=139.69  Aligned_cols=188  Identities=14%  Similarity=0.015  Sum_probs=135.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++||||+|+||++++++|+++|++|++++|+.....+...   ......+++++.+|++|.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997543221111   10112358899999999988876654       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||++|....        ......+++|+.++.++++++.    +.+..++|++||.......    +.+...|+.+
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~~Y~~s  157 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----PGVKAAYAAS  157 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----CCCcccHHHH
Confidence            8999999986322        1223567899999988888764    4566799999997664321    1234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       +++++.++||++.++...           ..+.         . ...++.+|.|++++.+++
T Consensus       158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-----------~~~~---------~-~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA-----------KAKS---------T-PFMVDTETGVKALVKAIE  216 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh-----------cccc---------C-CccCCHHHHHHHHHHHHh
Confidence            99998877642       578999999998755221           0000         1 135789999999999997


Q ss_pred             CC
Q psy4233         229 DP  230 (303)
Q Consensus       229 ~~  230 (303)
                      ++
T Consensus       217 ~~  218 (248)
T PRK08251        217 KE  218 (248)
T ss_pred             cC
Confidence            53

>PRK07069 short chain dehydrogenase; Validated

Probab=99.77  E-value=3.1e-17  Score=138.82  Aligned_cols=210  Identities=14%  Similarity=0.077  Sum_probs=142.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcC---CCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCG---DLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++||||+|+||.++++.|+++|++|++++|+..+..+.+. ...   ....+..+.+|+.|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999997333222211 110   11224568899999998877654       47


Q ss_pred             CEEEEccccCccc--------cchhhhhhhcc----hHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFAT--------KNFTIADANVE----IPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~~--------~~~~~~~~n~~----~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||++|.....        .....+++|+.    .+..++.++++.+.+++|++||...+...     .....|+.+|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~-----~~~~~Y~~sK  155 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE-----PDYTAYNASK  155 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC-----CCCchhHHHH
Confidence            9999999863221        22345677877    67778888877777899999998876532     2346799999


Q ss_pred             HHHHHHHHhh---------CCCEEEEeecceeeCCCchhhH-HH--HHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         157 YQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRY-YG--HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       157 ~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      ...+.+++..         +++++.++||.+.+|....... ..  .......+.++       . ..+.+.+|+|++++
T Consensus       156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~  227 (251)
T PRK07069        156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP-------L-GRLGEPDDVAHAVL  227 (251)
T ss_pred             HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC-------C-CCCcCHHHHHHHHH
Confidence            9999887752         3678899999998875431100 00  00000111111       1 24578999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCC
Q psy4233         225 AACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~  242 (303)
                      .++..+  ...|+.+.+.++
T Consensus       228 ~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        228 YLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHcCccccCccCCEEEECCC
Confidence            987653  235666666544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.77  E-value=2.7e-17  Score=140.29  Aligned_cols=213  Identities=14%  Similarity=-0.005  Sum_probs=146.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.... +.+.... ..++.++++|+.|.+++..+++       .+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5678999999999999999999999999999999975432 2211111 1358889999999988877654       47


Q ss_pred             CEEEEccccCcc-----c-c-------chhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          89 NVVINLIGREFA-----T-K-------NFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        89 D~vi~~a~~~~~-----~-~-------~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      |++||++|....     . .       .+..+++|+.++..+++++...   .-.++|++||...+...     .....|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y  156 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-----GGGPLY  156 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----CCCchh
Confidence            999999996321     1 1       2346788999988888877532   12479999998776421     234579


Q ss_pred             hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh---------HHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR---------YYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      +.+|...+.+++..      ++++..+.||.+..+......         .............|       . .-+...+
T Consensus       157 ~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~~~  228 (263)
T PRK06200        157 TASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP-------L-QFAPQPE  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC-------C-CCCCCHH
Confidence            99999999988764      478888999988765321100         00000000111111       1 2368899


Q ss_pred             HHHHHHHHHhcCC---CCCCcEEEEeCCc
Q psy4233         218 DVAAAIVAACKDP---DAAGKIYQAVGPK  243 (303)
Q Consensus       218 Dva~~~~~~~~~~---~~~g~~~~i~~~~  243 (303)
                      |+|+++++++...   ...|+.+.+.+|.
T Consensus       229 eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        229 DHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             HHhhhhhheecccccCcccceEEEEcCce
Confidence            9999999998743   2368888887663

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.1e-17  Score=142.29  Aligned_cols=169  Identities=13%  Similarity=0.011  Sum_probs=120.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +++++++|+||||+|+||.+++++|+++|++|++++|+.....+.   +.......+++++.+|+.|.+++.++++    
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            456788999999999999999999999999999999975432211   1111112358899999999998887654    


Q ss_pred             ---ccCEEEEccccCcc------ccchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCC--CC------CCCC
Q psy4233          87 ---YSNVVINLIGREFA------TKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADP--NP------PTYY  145 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~--~~------~~~~  145 (303)
                         ++|+|||+||....      +..+..+++|+.+    +..++..+++.+..++|++||...+.  ..      .+.+
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  171 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR  171 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence               47999999986322      2334567889988    55666666666667999999986542  10      1112


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEE--EeecceeeCC
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATI--FRPSDMYGSG  182 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~i--lrp~~~~G~~  182 (303)
                      ..+...|+.+|...+.+.+..       ++++++  +.||.+..+.
T Consensus       172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            344568999999999887653       444444  4799887664

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.6e-17  Score=139.46  Aligned_cols=214  Identities=15%  Similarity=0.079  Sum_probs=146.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +++++||||+|.||.++++.|+++|++|++++|+........... ....+++++.+|++|++++.+++.       .+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999999999754322111111 112468899999999988877654       479


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|||++|....        +.+...+++|+.++.++++++..    .+ ..++|++||...+..     ......|+.+|
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~~sK  155 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA-----GPGVIHSAAAK  155 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC-----CCCCcchHHHH
Confidence            99999985211        22346789999999999998843    22 358999998866532     12346799999


Q ss_pred             HHHHHHHHh--------hCCCEEEEeecceeeCCC-chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         157 YQGEKEVLR--------EFPEATIFRPSDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       157 ~~~e~~~~~--------~~~~~~ilrp~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      ...+.+.+.        .|+++..++||.+.++.. .....-....+...+..++        ..+...+|+|+++..++
T Consensus       156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~  227 (252)
T PRK07677        156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL--------GRLGTPEEIAGLAYFLL  227 (252)
T ss_pred             HHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC--------CCCCCHHHHHHHHHHHc
Confidence            999988764        268899999999875321 1000001111111111221        23678999999999988


Q ss_pred             cCC--CCCCcEEEEeCCcc
Q psy4233         228 KDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~  244 (303)
                      ...  ...|+.+.+.++..
T Consensus       228 ~~~~~~~~g~~~~~~gg~~  246 (252)
T PRK07677        228 SDEAAYINGTCITMDGGQW  246 (252)
T ss_pred             CccccccCCCEEEECCCee
Confidence            643  34677888876643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.77  E-value=1.7e-17  Score=138.00  Aligned_cols=198  Identities=18%  Similarity=0.081  Sum_probs=143.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC--CCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD--LGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++|||||+.||.+++++|.++|++|+++.|+.+...+..+...+  .-+++++.+|++|++++..+..      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999986543332222211  2347899999999999888764      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       .+|++||+||....        +....++++|+.+...|.++.-    +.+-.+||.++|...+-..     .-...|+
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~-----p~~avY~  157 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT-----PYMAVYS  157 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----cchHHHH
Confidence             48999999996322        2335788999988887777663    4455699999999998631     2236799


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|..+-.+-+.       .|+.++.+.||.+..+... .         .  ......... . .-+++.+|+|+..+..
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~---------~--~~~~~~~~~-~-~~~~~~~~va~~~~~~  223 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A---------K--GSDVYLLSP-G-ELVLSPEDVAEAALKA  223 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c---------c--ccccccccc-h-hhccCHHHHHHHHHHH
Confidence            999988765544       3789999999887754322 0         0  001110001 1 3479999999999999


Q ss_pred             hcCCC
Q psy4233         227 CKDPD  231 (303)
Q Consensus       227 ~~~~~  231 (303)
                      +.+.+
T Consensus       224 l~~~k  228 (265)
T COG0300         224 LEKGK  228 (265)
T ss_pred             HhcCC
Confidence            98643

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-17  Score=140.57  Aligned_cols=196  Identities=15%  Similarity=0.073  Sum_probs=137.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------cc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YS   88 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~   88 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.........+++++.+|+.|.+++..+++      .+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            356789999999999999999999999999999999754322221111123468999999999988877654      47


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||++|....        ......+++|+.++.++++++..    .+..++|++||......     ......|+.+|
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK  156 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-----YPGYASYCASK  156 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-----CCCccHHHHHH
Confidence            999999986322        12245778999999999888753    33458999988755432     12346799999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+++..       ++.++.+.||.+..+....  .       .. ..  ..  ... ....+.+|+|++++.++++
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~--~-------~~-~~--~~--~~~-~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        157 FALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE--A-------VQ-AL--NR--ALG-NAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh--h-------cc-cc--cc--ccc-CCCCCHHHHHHHHHHHHhC
Confidence            9988776553       5788889998886543211  0       00 00  00  000 1357899999999999986


Q ss_pred             C
Q psy4233         230 P  230 (303)
Q Consensus       230 ~  230 (303)
                      +
T Consensus       222 ~  222 (263)
T PRK09072        222 E  222 (263)
T ss_pred             C
Confidence            4

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.9e-17  Score=142.54  Aligned_cols=205  Identities=17%  Similarity=0.036  Sum_probs=141.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++.+++++||||+|.||.+++++|.++|++|++++|+.....+.....+...++..+.+|++|.+++.++++       .
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999754322221222222346677799999988877654       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|+|||++|....        +..+..+++|+.++.++++++...   ...+||++||...+...     .....|+.+|
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asK  160 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-----PGMAAYCASK  160 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-----CCchHHHHHH
Confidence            7999999996321        122457889999999999887532   23589999998876531     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++.++.+.||.+..+.......-...........+.     .. ..+++.+|+|++++.++..
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~-~~~~~~~~va~~i~~~~~~  234 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW-----PL-RRTTSVEKCAAAFVDGIER  234 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC-----cc-cCCCCHHHHHHHHHHHHhc
Confidence            9999888653       689999999988765322100000000000111111     01 2468899999999999975


Q ss_pred             C
Q psy4233         230 P  230 (303)
Q Consensus       230 ~  230 (303)
                      +
T Consensus       235 ~  235 (296)
T PRK05872        235 R  235 (296)
T ss_pred             C
Confidence            3

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=5.9e-17  Score=137.91  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=140.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   91 (303)
                      |+++||||+|.||++++++|+++|++|++++|+.....+.........++.++.+|++|++++.++++       ++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            58999999999999999999999999999999754322211111112358889999999998887664       48999


Q ss_pred             EEccccCcc-------cc---chhhhhhhcchHHHHHHH----HH-hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          92 INLIGREFA-------TK---NFTIADANVEIPARLARL----SK-EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        92 i~~a~~~~~-------~~---~~~~~~~n~~~~~~l~~~----~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      ||++|....       ..   ....+.+|+.++..+.++    +. +.+..+||++||......     ..+...|+.+|
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y~~sK  155 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----MPPLVLADVTR  155 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----CCCchHHHHHH
Confidence            999996321       11   112345666655444433    22 233458999999877542     23456899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH--------H-HHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG--------H-MWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ...+.+.+..       ++.+..+.||.+-.|.... ...+.        . +........|       . .-+...+|+
T Consensus       156 aa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dv  227 (259)
T PRK08340        156 AGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP-------L-KRTGRWEEL  227 (259)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC-------c-cCCCCHHHH
Confidence            9999988763       5788889999887664221 00000        0 0000011111       1 236789999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      |+++++++..+  ...|++..+.++...
T Consensus       228 a~~~~fL~s~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        228 GSLIAFLLSENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             HHHHHHHcCcccccccCceEeecCCcCC
Confidence            99999999753  336877877776543

>TIGR02415 23BDH acetoin reductases

Probab=99.76  E-value=5.7e-17  Score=137.49  Aligned_cols=214  Identities=14%  Similarity=0.072  Sum_probs=141.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      ++++||||+|+||.+++++|+++|++|+++.|+.....+..+. .....++.++.+|++|++++.+++.       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999874322221111 1112458899999999998887654       3699


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |||++|....        ...+..+++|+.++..+++++..    .+ ..++|++||.......     .....|+.+|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~  155 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----PILSAYSSTKF  155 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----CCCcchHHHHH
Confidence            9999986321        12235688999888877766543    23 2589999987654321     23578999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceee------ecCCCceeeCceeHHHHHHHHH
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV------YKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      ..+.+++..       ++.+.+++||.+..+....   +..... .....+.      +...... ..+.+.+|+++++.
T Consensus       156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~  230 (254)
T TIGR02415       156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE---IDEETS-EIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVS  230 (254)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh---hhhhhh-hcccCchHHHHHHHHhhCCC-CCCCCHHHHHHHHH
Confidence            999888653       5889999999886553211   000000 0000000      0000001 23688999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCC
Q psy4233         225 AACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~  242 (303)
                      .++....  ..|+.+.+.++
T Consensus       231 ~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       231 FLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             hhcccccCCccCcEEEecCC
Confidence            9998643  25766666554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.6e-17  Score=140.39  Aligned_cols=154  Identities=12%  Similarity=0.011  Sum_probs=117.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      |++++||||+|+||++++++|+++|++|++++|+.... +.+..    .+++++.+|++|.+++.++++       ++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-EALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47899999999999999999999999999999975432 21111    247889999999988877653       4799


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      |||++|....        +.....+++|+.++.++++++..   .+..++|++||.......     .....|+.+|...
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~al  150 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----PFAGAYCASKAAV  150 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----CCccHHHHHHHHH
Confidence            9999995321        22345788999999888888743   233589999987664321     2346899999998


Q ss_pred             HHHHHh-------hCCCEEEEeecceeeC
Q psy4233         160 EKEVLR-------EFPEATIFRPSDMYGS  181 (303)
Q Consensus       160 e~~~~~-------~~~~~~ilrp~~~~G~  181 (303)
                      +.+.+.       .+++++.++||.+..+
T Consensus       151 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        151 HALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            887654       3799999999999765

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.6e-17  Score=144.51  Aligned_cols=199  Identities=18%  Similarity=0.171  Sum_probs=139.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+.+++|+||||+|.||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            355789999999999999999999999999999999754322211111 112357889999999998887763       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++.+++    ++.+..++|++||...+...     .....|+.
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~-----p~~~~Y~a  158 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ-----PYAAAYSA  158 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----CCchhHHH
Confidence            48999999986322        122357889999998887776    33444589999998766421     22468999


Q ss_pred             HHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..        ++.++.+.||.+.+|........      .....      ... ....+.+|+|++++.+
T Consensus       159 sKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~------~~~~~------~~~-~~~~~pe~vA~~il~~  225 (330)
T PRK06139        159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY------TGRRL------TPP-PPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc------ccccc------cCC-CCCCCHHHHHHHHHHH
Confidence            999866655442        57888999999987743211100      00000      011 2357999999999999


Q ss_pred             hcCCC
Q psy4233         227 CKDPD  231 (303)
Q Consensus       227 ~~~~~  231 (303)
                      ++++.
T Consensus       226 ~~~~~  230 (330)
T PRK06139        226 ADRPR  230 (330)
T ss_pred             HhCCC
Confidence            98654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.7e-17  Score=139.23  Aligned_cols=211  Identities=17%  Similarity=0.104  Sum_probs=137.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc---------
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS---------   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---------   88 (303)
                      |++++||||+|+||++++++|+++|++|++++|+..+....+... ...+++++.+|++|.+++..+++.+         
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            468999999999999999999999999999999753322221111 1246889999999999988877542         


Q ss_pred             --CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----Hhc-CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          89 --NVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEM-GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        89 --D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        +++||++|....         ......+++|+.+...+++.+    ++. +.+++|++||..+..     +..+...|
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y  154 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----PYFGWSAY  154 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----CCCCcHHH
Confidence              178899885321         223356778888866666554    332 345899999987653     23445789


Q ss_pred             hHHHHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHH-HHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       153 ~~~K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +.+|...+.+++..         ++++..++||.+-.+......... ..............    . ..+...+|+|+.
T Consensus       155 ~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~dva~~  229 (251)
T PRK06924        155 CSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE----E-GKLLSPEYVAKA  229 (251)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh----c-CCcCCHHHHHHH
Confidence            99999999988643         477888999887654321100000 00000000000000    1 136899999999


Q ss_pred             HHHHhcC-CCCCCcEEEE
Q psy4233         223 IVAACKD-PDAAGKIYQA  239 (303)
Q Consensus       223 ~~~~~~~-~~~~g~~~~i  239 (303)
                      ++.++.. ....|+.+.+
T Consensus       230 ~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        230 LRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             HHHHHhcccCCCCCEeeh
Confidence            9999986 3335655544

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9.3e-17  Score=137.76  Aligned_cols=196  Identities=14%  Similarity=0.087  Sum_probs=136.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---c---h--hcCCCCceEEEecCCCCHHHHHHHhc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---L---R--LCGDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~---~--~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      .+++++++||||+|+||+++++.|+++|++|++++|+.......   +   .  ......++.++.+|++|++++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999975432110   0   0  11112458899999999998887765


Q ss_pred             -------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCC
Q psy4233          87 -------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYIS  147 (303)
Q Consensus        87 -------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~  147 (303)
                             ++|+|||++|....        +..+..+++|+.++.++++++...    +-.++|++||......   ....
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---~~~~  159 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---KWFA  159 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---cccC
Confidence                   48999999986321        123457789999999999998642    2348999988653321   1113


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      +...|+.+|..+|.+++..       +++++.+.|+.++ .+.      ....   ....       ... ..+...+|+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~------~~~~---~~~~-------~~~-~~~~~p~~v  222 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA------VRNL---LGGD-------EAM-RRSRTPEIM  222 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH------HHhc---cccc-------ccc-cccCCHHHH
Confidence            4578999999999988764       5788889997433 111      0000   0001       111 235789999


Q ss_pred             HHHHHHHhcCC
Q psy4233         220 AAAIVAACKDP  230 (303)
Q Consensus       220 a~~~~~~~~~~  230 (303)
                      |++++.++...
T Consensus       223 a~~~~~l~~~~  233 (273)
T PRK08278        223 ADAAYEILSRP  233 (273)
T ss_pred             HHHHHHHhcCc
Confidence            99999998754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.76  E-value=3.6e-17  Score=156.08  Aligned_cols=224  Identities=16%  Similarity=0.099  Sum_probs=146.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+...........   ....++..+.+|++|.+++.+++.     
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            466889999999999999999999999999999999754322111111   112357789999999999888776     


Q ss_pred             --ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcC-CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 --YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMG-VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        ++|+|||+||.....        .....+++|+.+...+.+.+    ++.+ -.++|++||.......     .....
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----~~~~a  565 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----KNASA  565 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----CCCHH
Confidence              589999999963221        12356677777766655443    3333 2489999997654321     23478


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhh----cceeeecCCCceeeCceeHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVF----RKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      |+.+|...+.+++..       ++++..++|+.++ |.+.....+........+    .....+...... ..+++.+|+
T Consensus       566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v~peDV  644 (676)
T TIGR02632       566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHIFPADI  644 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCcCHHHH
Confidence            999999999988763       6889999999887 322110000000000000    000001111111 346899999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      |+++.+++...  ...|+++++.+|..
T Consensus       645 A~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       645 AEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHhCCcccCCcCcEEEECCCch
Confidence            99999998643  33588899887754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.76  E-value=2.9e-17  Score=140.01  Aligned_cols=214  Identities=14%  Similarity=0.052  Sum_probs=145.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.... +.+... ...++..+++|+.|.+++.++++       .
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-QELEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            35678999999999999999999999999999999875322 222111 11358889999999888776654       4


Q ss_pred             cCEEEEccccCcc-----c--------cchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          88 SNVVINLIGREFA-----T--------KNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        88 ~D~vi~~a~~~~~-----~--------~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                      +|++||+||....     .        ..+..+++|+.++..+++++...   .-.++|++||...+..     ......
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~  154 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-----NGGGPL  154 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-----CCCCch
Confidence            7999999985211     1        23467899999999999988542   1247888888765431     123468


Q ss_pred             hhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhH-HHH-----H-HHh-hhcceeeecCCCceeeCceeHH
Q psy4233         152 FYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRY-YGH-----M-WRH-VFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       152 y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~-~~~-----~-~~~-~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      |+.+|...+.+.+..      .+++..+.||.+..+....... ...     . ... ....+|+        ..+...+
T Consensus       155 Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~  226 (262)
T TIGR03325       155 YTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI--------GRMPDAE  226 (262)
T ss_pred             hHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC--------CCCCChH
Confidence            999999999988764      2678889999987663211000 000     0 000 0111221        2367899


Q ss_pred             HHHHHHHHHhcCCC---CCCcEEEEeCCc
Q psy4233         218 DVAAAIVAACKDPD---AAGKIYQAVGPK  243 (303)
Q Consensus       218 Dva~~~~~~~~~~~---~~g~~~~i~~~~  243 (303)
                      |+|++++.++..+.   ..|+++.+.++.
T Consensus       227 eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       227 EYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             HhhhheeeeecCCCcccccceEEEecCCe
Confidence            99999999887532   367788776653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.75  E-value=8.5e-17  Score=135.20  Aligned_cols=206  Identities=12%  Similarity=0.064  Sum_probs=141.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV   91 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   91 (303)
                      |+||||+|+||.+++++|+++|++|+++.|+..+..+... . .....++.++.+|++|.+++.++++       ..|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999998876543322211 1 1112468999999999988877654       36999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHH-----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLS-----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||++|....        ..+...+++|+.++.++++++     ++.+..++|++||.......     .....|+.+|..
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~~~~~Y~~sK~a  155 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN-----RGQVNYSAAKAG  155 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC-----CCCcchHHHHHH
Confidence            999986321        234467889999999998865     22344689999997654321     234689999998


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .+.+.+..       +++++.++||.+.++......   ..........|+        ..+...+|+|+++++++..+ 
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~~~~~  224 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPM--------NRMGQPAEVASLAGFLMSDGA  224 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcCchh
Confidence            87766543       689999999999877433111   111111112221        23578899999999999753 


Q ss_pred             -CCCCcEEEEeCC
Q psy4233         231 -DAAGKIYQAVGP  242 (303)
Q Consensus       231 -~~~g~~~~i~~~  242 (303)
                       ...|....+.++
T Consensus       225 ~~~~g~~~~~~gg  237 (239)
T TIGR01831       225 SYVTRQVISVNGG  237 (239)
T ss_pred             cCccCCEEEecCC
Confidence             235666666544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG4039|consensus

Probab=99.75  E-value=1.6e-17  Score=126.57  Aligned_cols=155  Identities=19%  Similarity=0.222  Sum_probs=131.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |+||..+|.||||-+|+.+++.+++.+  .+|+++.|+.....+.      ...+.....|+...+++.+.+.++|+.++
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc   89 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQGPDVLFC   89 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhcCCceEEE
Confidence            578899999999999999999999998  6899999985322221      13477788899889999999999999999


Q ss_pred             ccccC-ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCC-CEE
Q psy4233          94 LIGRE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EAT  171 (303)
Q Consensus        94 ~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~-~~~  171 (303)
                      +.|.. .......+++++-+....++++|++.|+++|+.+||.++..       .+...|...|.++|+-+.+..+ +++
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~-------sSrFlY~k~KGEvE~~v~eL~F~~~~  162 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP-------SSRFLYMKMKGEVERDVIELDFKHII  162 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc-------ccceeeeeccchhhhhhhhccccEEE
Confidence            98864 33345568888888889999999999999999999999987       5567899999999999999865 799


Q ss_pred             EEeecceeeCCC
Q psy4233         172 IFRPSDMYGSGD  183 (303)
Q Consensus       172 ilrp~~~~G~~~  183 (303)
                      |+|||.+.|.+.
T Consensus       163 i~RPG~ll~~R~  174 (238)
T KOG4039|consen  163 ILRPGPLLGERT  174 (238)
T ss_pred             EecCcceecccc
Confidence            999999999643

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.2e-16  Score=136.50  Aligned_cols=215  Identities=10%  Similarity=-0.045  Sum_probs=144.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++++++++||||+|.||.+++++|+++|++|++++|+..+..+...   ......++..+.+|++|.+++.++++     
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3557899999999999999999999999999999997543222111   11111357889999999988876553     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        .+|++||+||....        ......+++|+.+...+++++    ++.+..++|++||.......     .....|
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~y  159 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE-----PHMVAT  159 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-----CCchHh
Confidence              37999999996321        123456677777766666554    44445699999998775421     223679


Q ss_pred             hHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCch-hh-------HHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233         153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKF-LR-------YYGHMWRH--VFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~-~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~i~  215 (303)
                      +.+|...+.+.+.       .+++++.++||.+..|.... ..       .+..+...  ....+|+        ..+..
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~  231 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL--------GRLGR  231 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc--------CCCCC
Confidence            9999988877764       26899999999987653210 00       00000000  0111121        23678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         216 VGDVAAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      .+|+|++++.++...  ...|+++.+.++
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            999999999998742  346888888766

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.5e-17  Score=138.88  Aligned_cols=155  Identities=17%  Similarity=0.100  Sum_probs=117.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----------
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----------   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----------   86 (303)
                      ||+++||||||+||.+++++|+++|++|++++|+.....  ..  ....+++++.+|+.|.+++..++.           
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            569999999999999999999999999999999754321  11  112468899999999988887432           


Q ss_pred             ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ..|++||++|....         +.....+++|+.++..+.+.+.    +.+.+++|++||...+..     ..+...|+
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~  151 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA-----YAGWSVYC  151 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC-----CCCchHHH
Confidence            36899999986322         1234677889998666655543    344569999999877642     23457899


Q ss_pred             HHHHHHHHHHHhh------CCCEEEEeecceeeC
Q psy4233         154 RTKYQGEKEVLRE------FPEATIFRPSDMYGS  181 (303)
Q Consensus       154 ~~K~~~e~~~~~~------~~~~~ilrp~~~~G~  181 (303)
                      .+|...|.+++.+      ++++..++||.+-.|
T Consensus       152 ~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        152 ATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            9999999988743      688999999887554

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2e-16  Score=134.13  Aligned_cols=212  Identities=11%  Similarity=0.063  Sum_probs=145.1

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+  +-||.+++++|+++|++|++..|+. ...+..+... ..++.++++|++|++++.++++       
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV-DEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc-cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999  7999999999999999999998862 2222222111 1357889999999988876543       


Q ss_pred             ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      .+|++||+||....            +..+..+++|+.++..+.+++...  .-.++|++||......     ......|
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~~~~~~Y  157 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-----IPNYNVM  157 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-----CCcchhh
Confidence            37999999986321            123457788998888888877542  1248999998765431     1234679


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       |+.+..+.||.+-.+.......-....+......|.        ..+...+|+|+++++
T Consensus       158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~~~  229 (252)
T PRK06079        158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD--------GVGVTIEEVGNTAAF  229 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc--------cCCCCHHHHHHHHHH
Confidence            99999999988763       689999999999766321110001111111112221        236888999999999


Q ss_pred             HhcCC--CCCCcEEEEeCC
Q psy4233         226 ACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~  242 (303)
                      ++..+  ...|+++.+.++
T Consensus       230 l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        230 LLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HhCcccccccccEEEeCCc
Confidence            99753  336777777665

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.2e-16  Score=135.99  Aligned_cols=216  Identities=14%  Similarity=0.140  Sum_probs=146.0

Q ss_pred             CcccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcc--cccchhcCCCCceEEEecCCCCHHHHHHHhc-
Q psy4233          12 GRSSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   86 (303)
                      .++++++++++||||+  +.||.+++++|+++|++|++..|+....  .+.+.  ...+.+.++.+|++|.+++.++++ 
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLA--EELDAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHH--HhhccceEEecCcCCHHHHHHHHHH
Confidence            4556778999999998  4999999999999999999988864321  11111  111335678999999988876653 


Q ss_pred             ------ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCC
Q psy4233          87 ------YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        87 ------~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                            ..|++||+||....            +..+..+++|+.++..+.+++...  .-.++|++||......     .
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-----~  156 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-----V  156 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-----C
Confidence                  37999999986321            223468899999999988876432  1148999998765421     1


Q ss_pred             CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      .....|+.+|...+.+.+..       ++.+..+.||.+-.+...................|.        ..+...+|+
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dv  228 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL--------RRLVDIDDV  228 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc--------CCCCCHHHH
Confidence            23467999999998877653       688999999988765321100011111111112221        236788999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      |+++++++..+  ...|+.+.+.++
T Consensus       229 a~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        229 GAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHhChhhccccCcEEeeCCc
Confidence            99999999752  346777777655

>PRK06484 short chain dehydrogenase; Validated

Probab=99.74  E-value=1.5e-16  Score=148.77  Aligned_cols=212  Identities=12%  Similarity=0.063  Sum_probs=150.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      .+++++||||+|.||.+++++|+++|++|++++|+.....+.....  ..++..+.+|++|++++.++++       .+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999743322211111  1356789999999998887664       379


Q ss_pred             EEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          90 VVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        90 ~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ++||+||....         ...+..+++|+.++.++++++...  +-.+||++||......     ......|+.+|..
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa  420 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----LPPRNAYCASKAA  420 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----CCCCchhHHHHHH
Confidence            99999996321         123467899999999999987653  2358999999877642     2345789999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHH-HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYY-GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+.+.+..       ++++..+.||.+..+........ ........+..++        ..+...+|+|++++.++...
T Consensus       421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL--------GRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCcc
Confidence            99888763       68999999999987642211000 0000001111221        23578999999999999753


Q ss_pred             --CCCCcEEEEeCCc
Q psy4233         231 --DAAGKIYQAVGPK  243 (303)
Q Consensus       231 --~~~g~~~~i~~~~  243 (303)
                        ...|+.+.+.++.
T Consensus       493 ~~~~~G~~i~vdgg~  507 (520)
T PRK06484        493 ASYVNGATLTVDGGW  507 (520)
T ss_pred             ccCccCcEEEECCCc
Confidence              2468888887664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.74  E-value=2e-16  Score=135.19  Aligned_cols=211  Identities=13%  Similarity=0.089  Sum_probs=141.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhcC--CCCceEEEecCCCCHHHH----HHHh------
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCG--DLGQVLFQPYHPRNDDEI----RKAI------   85 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~----~~~~------   85 (303)
                      +.++||||+|+||.+++++|+++|++|+++.|+..+..+.+ ....  ...++.++.+|++|.+++    .+++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999877543332221 1111  113466789999998754    3332      


Q ss_pred             -cccCEEEEccccCcc------c-------------cchhhhhhhcchHHHHHHHHHhcC----------CceEEEEecC
Q psy4233          86 -KYSNVVINLIGREFA------T-------------KNFTIADANVEIPARLARLSKEMG----------VEKFIHISAL  135 (303)
Q Consensus        86 -~~~D~vi~~a~~~~~------~-------------~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~Ss~  135 (303)
                       .++|+|||+||....      .             .....+++|+.++..+++++....          ..+++++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             358999999985321      1             123568899999988888754221          1368888876


Q ss_pred             ccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCc
Q psy4233         136 NADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEE  208 (303)
Q Consensus       136 ~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (303)
                      ....     +......|+.+|..++.+.+..       |++++.++||.+..|..... .....+   ....++     .
T Consensus       162 ~~~~-----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~~~~~~---~~~~~~-----~  227 (267)
T TIGR02685       162 MTDQ-----PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQEDY---RRKVPL-----G  227 (267)
T ss_pred             hccC-----CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-hHHHHH---HHhCCC-----C
Confidence            5542     2244578999999999988763       68999999999876633211 111111   111221     0


Q ss_pred             eeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         209 TIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       209 ~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                        ..+...+|+|++++.++.+.  ...|+.+.+.++..+
T Consensus       228 --~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       228 --QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             --cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence              13578999999999999754  236778888776544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-16  Score=133.34  Aligned_cols=215  Identities=14%  Similarity=0.052  Sum_probs=146.7

Q ss_pred             ccCCCcEEEEEcCCC-hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASG-YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      ..+++++++||||+| .||.++++.|+++|++|++++|+.....+.....   ....++.++++|+.+++++.++++   
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345678999999998 6999999999999999999888654322211111   111358899999999988887664   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                          .+|++||++|....        ......+++|+.++..+++++..    .+ -.++|++||...+..     ....
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~~  167 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA-----QHGQ  167 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----CCCC
Confidence                47999999996321        22345677899999888887643    22 348898888765432     1345


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+..|...... ............++        .-+...+|+|++
T Consensus       168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~--------~r~~~p~~va~~  238 (262)
T PRK07831        168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAF--------GRAAEPWEVANV  238 (262)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCC--------CCCcCHHHHHHH
Confidence            68999999999988763       689999999999887432110 01111111111221        236788999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~  242 (303)
                      +++++....  ..|+.+.+.++
T Consensus       239 ~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        239 IAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHcCchhcCcCCceEEeCCC
Confidence            999997532  36777776553

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.4e-16  Score=134.14  Aligned_cols=215  Identities=11%  Similarity=0.005  Sum_probs=147.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc---ccC
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK---YSN   89 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~---~~D   89 (303)
                      .+++++++||||+|.||.++++.|+++|++|++++|+............  ...+++++.+|++|.+++.++++   .+|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            3567899999999999999999999999999999997543222111111  12358899999999999887665   389


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      .+||++|....        +.....+++|+.+...+++++    ++.+..++|++||.....     +......|+.+|.
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~~~y~ask~  158 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----PDADYICGSAGNA  158 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----CCCCchHhHHHHH
Confidence            99999986321        122456788999888888876    333345899999876542     1233456889999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH----------HHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG----------HMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ..+.+.+..       +++++.+.||.+..|...  ..+.          ..++.....+|.        ..+...+|+|
T Consensus       159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va  228 (259)
T PRK06125        159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAGLPL--------GRPATPEEVA  228 (259)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhccCCc--------CCCcCHHHHH
Confidence            998877763       689999999988765211  0000          000000011111        2357899999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++++.++...  ...|+.+.+.++..
T Consensus       229 ~~~~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        229 DLVAFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             HHHHHHcCchhccccCceEEecCCee
Confidence            9999998743  33688888877643

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.1e-16  Score=134.65  Aligned_cols=216  Identities=13%  Similarity=0.072  Sum_probs=143.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc------ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK------YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------~~D~   90 (303)
                      .+.++|||| |+||.+++++|. +|++|++++|+..+..+...... ...++.++.+|++|.+++.++++      .+|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899998 799999999996 89999999997543222111111 11358889999999998887764      3899


Q ss_pred             EEEccccC-ccccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCC--------------C----C----C
Q psy4233          91 VINLIGRE-FATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPP--------------T----Y----Y  145 (303)
Q Consensus        91 vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~--------------~----~----~  145 (303)
                      +||+||.. ....+...+++|+.++.++++++...  .-.++|++||........              .    .    +
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP  159 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence            99999974 23456788999999999999988643  113567777765532110              0    0    0


Q ss_pred             ---CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hh-HHHHHHHhhhcceeeecCCCceeeCc
Q psy4233         146 ---ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LR-YYGHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       146 ---~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                         ......|+.+|+..+.+.+..       ++.+..+.||.+..+.... .. .-...........|+        ..+
T Consensus       160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~--------~r~  231 (275)
T PRK06940        160 DAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA--------GRP  231 (275)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc--------ccC
Confidence               012467999999988877642       6889999999998763211 00 000000000111121        236


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ...+|+|+++++++...  ...|+.+.+.++.
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            88999999999998643  3368888887764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.1e-16  Score=131.83  Aligned_cols=190  Identities=14%  Similarity=0.068  Sum_probs=132.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCC--HHHHHHHh------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRN--DDEIRKAI------   85 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d--~~~~~~~~------   85 (303)
                      +.+++++||||+|+||.+++++|+++|++|++++|+...........  .....+.++.+|+.|  .+++.+++      
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            55689999999999999999999999999999999864322111110  111346778899875  33343332      


Q ss_pred             --cccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          86 --KYSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        86 --~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                        ..+|+|||+||....         +.....+++|+.++.++++++..    .+..++|++||.....     |.....
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----~~~~~~  158 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----PKAYWG  158 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----CCCCcc
Confidence              347999999995321         12234678999998888887743    3446999999876543     122346


Q ss_pred             chhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .|+.+|+..+.+++..        +++++.++||.+++|....  .           .+    +... ......+|++.+
T Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~-----------~~----~~~~-~~~~~~~~~~~~  220 (239)
T PRK08703        159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--S-----------HP----GEAK-SERKSYGDVLPA  220 (239)
T ss_pred             chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--c-----------CC----CCCc-cccCCHHHHHHH
Confidence            8999999999987653        4788899999999874220  0           00    0111 235789999999


Q ss_pred             HHHHhc
Q psy4233         223 IVAACK  228 (303)
Q Consensus       223 ~~~~~~  228 (303)
                      ++.++.
T Consensus       221 ~~~~~~  226 (239)
T PRK08703        221 FVWWAS  226 (239)
T ss_pred             HHHHhC
Confidence            999997

>KOG1372|consensus

Probab=99.73  E-value=1.7e-16  Score=127.42  Aligned_cols=237  Identities=14%  Similarity=0.039  Sum_probs=171.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccch-hcCC-----CCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLR-LCGD-----LGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~-~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      +..||||-||.=|+.|+..|+.+||+|.++.|+..+-. ..+. ++.+     .....++.+|++|...+.+++.-  ++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            46899999999999999999999999999998754321 1111 1111     13478899999999999998875  89


Q ss_pred             EEEEccccC----ccccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGRE----FATKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPN------PPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K  156 (303)
                      -|+|+|+++    .++-++...++...++.+|+++.+..+.   -||...||..-|+.      .+.+|..|.+||+.+|
T Consensus       109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aK  188 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAK  188 (376)
T ss_pred             hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhh
Confidence            999999974    3466777888899999999999998764   28888999888885      4667888999999999


Q ss_pred             HHHHHHHHhh----CCCEEEEeecceee---CCCc--hh-hHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         157 YQGEKEVLRE----FPEATIFRPSDMYG---SGDK--FL-RYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       157 ~~~e~~~~~~----~~~~~ilrp~~~~G---~~~~--~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      ...-+++-.+    ++-.+   -|.++-   |..+  +. ..+.+-...   ........|+-... +||-|..|.++++
T Consensus       189 my~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~-RDWGhA~dYVEAM  264 (376)
T KOG1372|consen  189 MYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSAL-RDWGHAGDYVEAM  264 (376)
T ss_pred             hhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhh-cccchhHHHHHHH
Confidence            8776654332    33222   233332   4322  21 111111111   11122223333444 8999999999999


Q ss_pred             HHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       224 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +.+++++..  .-|.+..++..|.+|+.+......|+.
T Consensus       265 W~mLQ~d~P--dDfViATge~hsVrEF~~~aF~~ig~~  300 (376)
T KOG1372|consen  265 WLMLQQDSP--DDFVIATGEQHSVREFCNLAFAEIGEV  300 (376)
T ss_pred             HHHHhcCCC--CceEEecCCcccHHHHHHHHHHhhCcE
Confidence            999998664  369999999999999999999988854

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=3.1e-16  Score=132.51  Aligned_cols=193  Identities=10%  Similarity=0.000  Sum_probs=133.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCC--CHHHHHHH------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPR--NDDEIRKA------   84 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~--d~~~~~~~------   84 (303)
                      .+.+++|+||||+|+||.+++++|++.|++|++++|+..+........  ....+++++.+|++  +.+++.++      
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999754322211111  11235677888885  55544433      


Q ss_pred             -hcccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          85 -IKYSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        85 -~~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                       +..+|+|||+|+....         ......+++|+.++.++++++    ++.+..++|++||.......     ....
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----~~~~  163 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-----ANWG  163 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----CCCc
Confidence             3358999999986322         223467889999988888876    34567799999997654321     2346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+++..       +++++.++|+.+-++....  .       . ...       .. ..+...+|+++++
T Consensus       164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~--~-------~-~~~-------~~-~~~~~~~~~~~~~  225 (247)
T PRK08945        164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS--A-------F-PGE-------DP-QKLKTPEDIMPLY  225 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh--h-------c-Ccc-------cc-cCCCCHHHHHHHH
Confidence            8999999999987763       5778888888775442110  0       0 000       11 2468899999999


Q ss_pred             HHHhcCC
Q psy4233         224 VAACKDP  230 (303)
Q Consensus       224 ~~~~~~~  230 (303)
                      +.++..+
T Consensus       226 ~~~~~~~  232 (247)
T PRK08945        226 LYLMGDD  232 (247)
T ss_pred             HHHhCcc
Confidence            9988643

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.5e-16  Score=131.05  Aligned_cols=190  Identities=11%  Similarity=0.017  Sum_probs=137.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~   94 (303)
                      |+++||||+|.||++++++|+++|++|+++.|+..+..+....    .+++++++|++|.+++.++++    .+|++||+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            4899999999999999999999999999999975332111111    136788999999999888775    48999999


Q ss_pred             cccCc-------------cccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          95 IGREF-------------ATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        95 a~~~~-------------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      +|...             .+..+..+++|+.++..+++++...  .-.++|++||...         .....|+.+|+..
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------~~~~~Y~asKaal  147 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------PAGSAEAAIKAAL  147 (223)
T ss_pred             CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------CCccccHHHHHHH
Confidence            87411             1223467899999999999987542  1248999998751         2236899999999


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--  230 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--  230 (303)
                      +.+.+..       ++++..+.||.+..+..          . .....           ..-..+|+|+++++++...  
T Consensus       148 ~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~-~~~~~-----------p~~~~~~ia~~~~~l~s~~~~  205 (223)
T PRK05884        148 SNWTAGQAAVFGTRGITINAVACGRSVQPGY----------D-GLSRT-----------PPPVAAEIARLALFLTTPAAR  205 (223)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCccCchhh----------h-hccCC-----------CCCCHHHHHHHHHHHcCchhh
Confidence            9888763       57899999998864411          0 00011           1127899999999998743  


Q ss_pred             CCCCcEEEEeCCc
Q psy4233         231 DAAGKIYQAVGPK  243 (303)
Q Consensus       231 ~~~g~~~~i~~~~  243 (303)
                      ...|+++.+.++.
T Consensus       206 ~v~G~~i~vdgg~  218 (223)
T PRK05884        206 HITGQTLHVSHGA  218 (223)
T ss_pred             ccCCcEEEeCCCe
Confidence            2367777776654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=5.2e-16  Score=132.20  Aligned_cols=214  Identities=15%  Similarity=0.112  Sum_probs=141.1

Q ss_pred             CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||  ++.||.+++++|+++|++|++..|... ..+... ..........+++|+.|++++.++++      
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            56789999997  679999999999999999998776422 111111 11111235678999999988887653      


Q ss_pred             -ccCEEEEccccCcc---------c----cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGREFA---------T----KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~----~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                       ++|++||+||....         .    ..+..+++|+.++..+.+++..   .+-.++|++||......     ....
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~-----~~~~  157 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA-----IPNY  157 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC-----CCCc
Confidence             37999999986421         1    1123467788887777766532   12248999998876531     1234


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..+.||.+-.+...................|+        ..+...+|+|++
T Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peevA~~  229 (261)
T PRK08690        158 NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL--------RRNVTIEEVGNT  229 (261)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC--------CCCCCHHHHHHH
Confidence            67999999999877653       689999999998765321100001111101111221        236889999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +++++...  ...|+.+.+.++.
T Consensus       230 v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        230 AAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHhCcccCCcceeEEEEcCCc
Confidence            99999753  3367788777664

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=5.4e-16  Score=132.81  Aligned_cols=214  Identities=11%  Similarity=0.105  Sum_probs=142.6

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||++  .||.+++++|+++|++|++..|+... .+... ..........+++|++|.+++.++++      
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5678999999997  99999999999999999998886321 11111 11111223578999999988877653      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       .+|++||+||....            +.....+++|+.++.++++++...  .-.++|++||......     ......
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~~~~  158 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-----MPNYNV  158 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-----CCccch
Confidence             37999999996321            123456788999888887766421  1148999999865431     123468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..+.||.+..+.......-........+..|+        ..+...+|+|++++
T Consensus       159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peeva~~~~  230 (271)
T PRK06505        159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL--------RRTVTIDEVGGSAL  230 (271)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc--------cccCCHHHHHHHHH
Confidence            999999999887763       688999999998765321110000010001112221        12568899999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCc
Q psy4233         225 AACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +++....  ..|+.+.+.++.
T Consensus       231 fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        231 YLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHhCccccccCceEEeecCCc
Confidence            9997432  367788877664

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=3.9e-16  Score=133.75  Aligned_cols=215  Identities=11%  Similarity=0.112  Sum_probs=144.1

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++||||+  +.||.+++++|+++|++|++..|+.. ..+.+. ..........+++|++|++++.++++      
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            457899999997  89999999999999999988877521 111111 11111335678999999988887654      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ..|++||+||....            +.....+++|+.++..+++++...  +-.++|++||.+....     ......
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~p~~~~  161 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----MPHYNV  161 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----CCcchh
Confidence             37999999986321            133468889999999998877542  1248999998765421     123467


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..+.||.+..+...................|+        ..+...+|+|++++
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peevA~~~~  233 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--------RRTVTIEEVGDSAL  233 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc--------cccCCHHHHHHHHH
Confidence            999999999888763       588999999988654211000000000001112221        13578999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++...  ...|+.+.+.++..
T Consensus       234 ~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        234 YLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHhCccccCccceEEEECCCce
Confidence            999743  33687888877743

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=6.9e-16  Score=134.46  Aligned_cols=210  Identities=14%  Similarity=0.150  Sum_probs=141.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .++++++++||||+|+||.+++++|+++|++|++.+++.....+...  +.....++.++.+|++|.+++.++++     
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            34568899999999999999999999999999998875432221111  11112468899999999988887664     


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--------C---CceEEEEecCccCCCCCCCCC
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--------G---VEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--------~---~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                       .+|++||+||....        ......+++|+.++.++++++...        +   ..++|++||.......     
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  162 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-----  162 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----
Confidence             48999999996422        233467889999999999876421        1   1489999998765421     


Q ss_pred             CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      .....|+.+|..++.+.+..       ++++..+.|+. ..+   ...   ....    ..+..  .... ..++..+|+
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~---~~~---~~~~----~~~~~--~~~~-~~~~~pe~v  228 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA---MTA---DVFG----DAPDV--EAGG-IDPLSPEHV  228 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc---hhh---hhcc----ccchh--hhhc-cCCCCHHHH
Confidence            23457999999999887653       57777788862 111   000   0000    00000  0011 345689999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      |.+++.++...  ...|++|.+.++
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCC
Confidence            99999988642  246777777554

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=2.8e-16  Score=134.67  Aligned_cols=214  Identities=9%  Similarity=0.018  Sum_probs=143.2

Q ss_pred             cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCC--cccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNF--YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      .+++++++||||+  +.||.++++.|+++|++|++..|+..  +..+.+..... .. ..+.+|++|.+++.++++    
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            3567899999997  79999999999999999999888632  11111111111 12 578999999988877653    


Q ss_pred             ---ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                         .+|++||+||....            +..+..+++|+.++..+.+++-..  .-.++|++||.+....     ....
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-----~~~~  154 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-----VPHY  154 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----CCcc
Confidence               37999999996321            123467899999998888876532  1148999998765431     1224


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|+..+.+.+..       ++.+..+.||.+..+...................|.        .-+...+|+|++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--------~r~~~pedva~~  226 (274)
T PRK08415        155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL--------KKNVSIEEVGNS  226 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch--------hccCCHHHHHHH
Confidence            67999999998887763       688999999988765211000000000000111221        235788999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +++++...  ...|+.+.+.++.
T Consensus       227 v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        227 GMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHhhhhhhcccccEEEEcCcc
Confidence            99999743  3468788777764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.7e-16  Score=134.00  Aligned_cols=197  Identities=12%  Similarity=0.025  Sum_probs=133.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cC-CCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CG-DLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      |+++||||+|.||.++++.|+++|++|++++|+.....+.... .. ....+.++.+|++|++++.+++.       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999998865322111111 00 11224567899999988776554       379


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|||++|....        +.....+++|+.++.++++++..     ....++|++||......     ......|+.+|
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~~sK  155 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA-----LPWHAAYSASK  155 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-----CCCCcchHHHH
Confidence            99999986321        22346789999999999998742     22358999999865432     12346799999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      ...+.+.+.       .++++++++||.+.+|.......     ...........        .. ...++.+|+|++++
T Consensus       156 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~vA~~~~  226 (272)
T PRK07832        156 FGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR--------FR-GHAVTPEKAAEKIL  226 (272)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh--------cc-cCCCCHHHHHHHHH
Confidence            877776643       36999999999998774321100     00000000000        01 23589999999999


Q ss_pred             HHhcC
Q psy4233         225 AACKD  229 (303)
Q Consensus       225 ~~~~~  229 (303)
                      .++.+
T Consensus       227 ~~~~~  231 (272)
T PRK07832        227 AGVEK  231 (272)
T ss_pred             HHHhc
Confidence            99964

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=7.2e-16  Score=131.29  Aligned_cols=214  Identities=11%  Similarity=0.076  Sum_probs=141.2

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||++  .||.+++++|.++|++|++..|+. ...+..... .......++++|++|++++.++++      
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999997  799999999999999999887763 211111111 111223467899999988887664      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       .+|++||++|....            +.....+++|+.++..+++++...  .-.++|++||......     ......
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~~~~  159 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-----IPNYNV  159 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----CCcccc
Confidence             37999999985321            123457888999888888866421  1148999999766421     123468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|+..+.+.+..       ++.+..+.||.+-.+...................|+        ..+...+|+|++++
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~~  231 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL--------KRNTTQEDVGGAAV  231 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc--------CCCCCHHHHHHHHH
Confidence            999999999877753       688999999988755211000001111101111221        23578999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCc
Q psy4233         225 AACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +++..+.  ..|+.+.+.++-
T Consensus       232 ~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        232 YLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHhCcccccCcceEEEeCCcc
Confidence            9997532  367777776653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=9.4e-16  Score=130.33  Aligned_cols=215  Identities=14%  Similarity=0.140  Sum_probs=142.0

Q ss_pred             cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ++++++++||||+  +-||.+++++|+++|++|++..|+...  ..+.+.......++.++.+|++|++++.++++    
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            3567899999997  899999999999999999998775321  11212111112457889999999988877654    


Q ss_pred             ---ccCEEEEccccCcc---------c---cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA---------T---KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~---~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                         ..|++||++|....         .   .....+++|+.+...+++++...  .-.+||++||......     ....
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~  158 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-----VQNY  158 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-----CCCC
Confidence               37999999985321         1   11245677888877777666532  1248999999866431     1234


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..+.||.+..+...................|.        ..+...+|+|++
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~~va~~  230 (257)
T PRK08594        159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL--------RRTTTQEEVGDT  230 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc--------cccCCHHHHHHH
Confidence            68999999999988753       688999999988765211000000111001111121        235789999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~  242 (303)
                      +++++....  ..|+.+.+.++
T Consensus       231 ~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        231 AAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHcCcccccccceEEEECCc
Confidence            999987432  36777777655

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.5e-16  Score=126.64  Aligned_cols=179  Identities=19%  Similarity=0.175  Sum_probs=131.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~~a   95 (303)
                      |+++||||+|.||.+++++|.++ ++|++++|+..                .+.+|++|.++++++++   ++|++||++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a   63 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA   63 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999999999999 99999998642                35789999999988776   489999999


Q ss_pred             ccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          96 GREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        96 ~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      |....        ......+++|+.++.++++++...  +..+|+++||......     ......|+.+|...+.+.+.
T Consensus        64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~-----~~~~~~Y~~sK~a~~~~~~~  138 (199)
T PRK07578         64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP-----IPGGASAATVNGALEGFVKA  138 (199)
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC-----CCCchHHHHHHHHHHHHHHH
Confidence            86321        223456788999999999887642  2247999998765431     13346899999999987775


Q ss_pred             h------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         166 E------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       166 ~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      .      ++.+..++||.+-.+...           .....+       . ..+++.+|+|+++..+++. ...|++|++
T Consensus       139 la~e~~~gi~v~~i~Pg~v~t~~~~-----------~~~~~~-------~-~~~~~~~~~a~~~~~~~~~-~~~g~~~~~  198 (199)
T PRK07578        139 AALELPRGIRINVVSPTVLTESLEK-----------YGPFFP-------G-FEPVPAARVALAYVRSVEG-AQTGEVYKV  198 (199)
T ss_pred             HHHHccCCeEEEEEcCCcccCchhh-----------hhhcCC-------C-CCCCCHHHHHHHHHHHhcc-ceeeEEecc
Confidence            3      678888999877533110           111111       1 2468999999999999975 345666654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.70  E-value=1.4e-15  Score=129.35  Aligned_cols=216  Identities=15%  Similarity=0.112  Sum_probs=143.8

Q ss_pred             cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcc--cccch-hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      ++++++++||||+  +.||.+++++|+++|++|++..|+....  .+... ......++.++.+|++|++++.++++   
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            3567899999986  7999999999999999998876643211  11111 11111346788999999998887654   


Q ss_pred             ----ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                          .+|++||++|....            +..+..+++|+.++..+.+++...  .-.++|++||.....     +...
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----~~~~  157 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----AIPN  157 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----CCcc
Confidence                37999999986321            123467889999988888876431  124899999976543     1123


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ...|+.+|...+.+.+..       ++.+..+.||.+..+...................|+        ..+...+|+|.
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~~~dva~  229 (258)
T PRK07370        158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL--------RRTVTQTEVGN  229 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc--------CcCCCHHHHHH
Confidence            467999999999988763       588999999998765321100000111101111121        23678899999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++.+++..+  ...|+.+.+.++.
T Consensus       230 ~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        230 TAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHhChhhccccCcEEEECCcc
Confidence            999999743  2367777776653

>KOG2774|consensus

Probab=99.70  E-value=7.7e-16  Score=122.82  Aligned_cols=233  Identities=12%  Similarity=0.050  Sum_probs=167.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      ...+|||||+-|.+|..+++.|..+ |.+.++++ -..+.  +...     ..--++..|+-|...+.++.-+  +|.+|
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhc-----ccCCchhhhhhccccHHHhhcccccceee
Confidence            3569999999999999999999875 65444443 22221  1110     1245678899998888887643  99999


Q ss_pred             Ecccc---CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC---C----CCCCCchhHHHHHHHHH
Q psy4233          93 NLIGR---EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY---Y----ISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        93 ~~a~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~---~----~~~~~~y~~~K~~~e~~  162 (303)
                      |..+.   ..+.+-.....+|+.|..|+++.|++++. ++..-|++++||.+.+.   |    ..|.+.|+.+|..+|-+
T Consensus       116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~  194 (366)
T KOG2774|consen  116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELL  194 (366)
T ss_pred             eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHH
Confidence            98763   34555567889999999999999999998 78888999999874322   1    24678899999999976


Q ss_pred             HHh----hCCCEEEEeecceee---CCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--C
Q psy4233         163 VLR----EFPEATIFRPSDMYG---SGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--D  231 (303)
Q Consensus       163 ~~~----~~~~~~ilrp~~~~G---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~  231 (303)
                      -+.    +++++-.+|.+.++.   |+.+...+....+..  +.+....+--.+.. ..+.+.+|+-++++.++..+  .
T Consensus       195 GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtr-lpmmy~~dc~~~~~~~~~a~~~~  273 (366)
T KOG2774|consen  195 GEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTR-LPMMYDTDCMASVIQLLAADSQS  273 (366)
T ss_pred             HHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCcc-CceeehHHHHHHHHHHHhCCHHH
Confidence            655    378999999888876   444433333333332  23333333333333 78899999999999988654  3


Q ss_pred             CCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         232 AAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       232 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      .+..+||+. +-.+|-+|+++.+.+.+-
T Consensus       274 lkrr~ynvt-~~sftpee~~~~~~~~~p  300 (366)
T KOG2774|consen  274 LKRRTYNVT-GFSFTPEEIADAIRRVMP  300 (366)
T ss_pred             hhhheeeec-eeccCHHHHHHHHHhhCC
Confidence            367799996 466999999999988763

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.9e-15  Score=128.75  Aligned_cols=214  Identities=14%  Similarity=0.163  Sum_probs=141.5

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||++  .||.++++.|+++|++|++..|+. ...+... .....+.+..+.+|++|++++.++++      
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            4578999999985  899999999999999999888762 1111111 11112346788999999998887663      


Q ss_pred             -ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                       .+|++||+||....             +..+..+++|+.+...+.+++...  +-.++|++||.+....     .....
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~-----~~~~~  157 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----IPNYN  157 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-----CCCcc
Confidence             37999999985321             112245678888887787776431  1148999998765421     12346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       ++++..+.||.+..+...................|.        ..+...+|+|.++
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~  229 (262)
T PRK07984        158 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------RRTVTIEDVGNSA  229 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC--------cCCCCHHHHHHHH
Confidence            8999999999888763       688899999988654211000001111101111221        2357889999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++...  ...|+.+.+.++.
T Consensus       230 ~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        230 AFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHcCcccccccCcEEEECCCc
Confidence            9999753  3367777776664

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.1e-15  Score=125.40  Aligned_cols=190  Identities=11%  Similarity=0.044  Sum_probs=135.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh---c--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI---K--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~D~vi   92 (303)
                      |++++||||+|+||++++++|+++|++|++++|+... .+.+..    .+++++.+|++|.+++.+++   .  .+|.||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~-~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA-LAALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH-HHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            4689999999999999999999999999999987543 222221    24678999999999888754   2  389999


Q ss_pred             EccccCcc----------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233          93 NLIGREFA----------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        93 ~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++|....          ......++.|+.++.++++++...   .-.+++++||... ++..   +..+...|+.+|..
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a  152 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---TGTTGWLYRASKAA  152 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---cCCCccccHHhHHH
Confidence            99986411          123568899999999999988641   2247899988654 4321   11223469999999


Q ss_pred             HHHHHHhh-----CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--
Q psy4233         159 GEKEVLRE-----FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD--  231 (303)
Q Consensus       159 ~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  231 (303)
                      .+.+++..     +++++.++||++..+...                       .  ...+..++.++.++.++....  
T Consensus       153 ~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------~--~~~~~~~~~~~~~~~~~~~~~~~  207 (222)
T PRK06953        153 LNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------A--QAALDPAQSVAGMRRVIAQATRR  207 (222)
T ss_pred             HHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------C--CCCCCHHHHHHHHHHHHHhcCcc
Confidence            99988875     467888999888755211                       0  123677888999888775432  


Q ss_pred             CCCcEEEEe
Q psy4233         232 AAGKIYQAV  240 (303)
Q Consensus       232 ~~g~~~~i~  240 (303)
                      ..+..|+..
T Consensus       208 ~~~~~~~~~  216 (222)
T PRK06953        208 DNGRFFQYD  216 (222)
T ss_pred             cCceEEeeC
Confidence            345445443

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.7e-16  Score=148.32  Aligned_cols=192  Identities=14%  Similarity=0.070  Sum_probs=142.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....++.++.+|++|.+++.++++       
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            46678999999999999999999999999999999975432221111 1112458899999999999887765       


Q ss_pred             ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      ++|++||+||....          +.....+++|+.++.++++++    ++.+..++|++||.+++...     .....|
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  522 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA-----PRFSAY  522 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCcchH
Confidence            48999999996311          123467889999988877665    44566799999999887531     234679


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++.++.++||.+..+.....           ..   +    .. ...++.+++|+.++.
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-----------~~---~----~~-~~~~~~~~~a~~i~~  583 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-----------KR---Y----NN-VPTISPEEAADMVVR  583 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-----------cc---c----cC-CCCCCHHHHHHHHHH
Confidence            99999999988652       69999999999987643211           00   0    01 235789999999999


Q ss_pred             HhcCC
Q psy4233         226 ACKDP  230 (303)
Q Consensus       226 ~~~~~  230 (303)
                      .+.++
T Consensus       584 ~~~~~  588 (657)
T PRK07201        584 AIVEK  588 (657)
T ss_pred             HHHhC
Confidence            88643

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.4e-15  Score=129.49  Aligned_cols=213  Identities=14%  Similarity=0.138  Sum_probs=141.5

Q ss_pred             CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCC--cccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNF--YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++++++||||  ++.||.+++++|+++|++|++..|...  +..+.+.  ...+....+.+|++|++++.++++     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFA--AEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHH--HhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            45789999996  679999999999999999998765421  1111111  111234568999999998887663     


Q ss_pred             --ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 --~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                        .+|++||+||....             +..+..+++|+.++..+.+++-..  +-.++|++||.....     +....
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----~~~~~  156 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----VVPNY  156 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----CCCCc
Confidence              37999999986321             122346789999998888876542  124899999876642     11234


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..+.||.+-.+...................|+        ..+...+|+|++
T Consensus       157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~  228 (260)
T PRK06997        157 NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL--------RRNVTIEEVGNV  228 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc--------cccCCHHHHHHH
Confidence            57999999999888763       688999999988754221100001111001111221        235789999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +++++..+  ...|+++.+.++.
T Consensus       229 ~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        229 AAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHhCccccCcceeEEEEcCCh
Confidence            99999753  3467788776664

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.7e-15  Score=126.62  Aligned_cols=209  Identities=15%  Similarity=0.114  Sum_probs=140.6

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCc--------ccc--cch--hcCCCCceEEEecCCCCHHHH
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFY--------DVR--DLR--LCGDLGQVLFQPYHPRNDDEI   81 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~--------~~~--~~~--~~~~~~~~~~~~~Dl~d~~~~   81 (303)
                      +++++++||||+|  .||.+++++|+++|++|+++.|....        ...  ...  ......++.++.+|++|.+++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4578999999995  79999999999999999887543111        000  100  111123578899999999888


Q ss_pred             HHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCC
Q psy4233          82 RKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPP  142 (303)
Q Consensus        82 ~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~  142 (303)
                      .+++.       .+|++||++|....        +..+..+++|+.+...+.+++    ++.+-.+||++||.....   
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---  160 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG---  160 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---
Confidence            87664       26999999986321        123356888999888876544    333345999999987653   


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCcee
Q psy4233         143 TYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       143 ~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (303)
                        +......|+.+|..++.+.+..       +++++.++||.+..+...  ......   .....+       . ..+..
T Consensus       161 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~~---~~~~~~-------~-~~~~~  225 (256)
T PRK12859        161 --PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQG---LLPMFP-------F-GRIGE  225 (256)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHHH---HHhcCC-------C-CCCcC
Confidence              2234578999999999887653       689999999988765322  111110   111111       1 23567


Q ss_pred             HHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         216 VGDVAAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      .+|+|++++.++...  ...|+.+.+.++
T Consensus       226 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        226 PKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            899999999988643  236777776654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.69  E-value=4.2e-16  Score=147.52  Aligned_cols=207  Identities=17%  Similarity=0.094  Sum_probs=141.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      ..+..++++||||+|+||++++++|.++|++|++++|+.....+.... .....++.++.+|++|++++.++++.     
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            446678999999999999999999999999999999975432221111 11123588999999999988877653     


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        +|++||+||....        +.....+++|+.++.++.+++.    +.+ -.+||++||...+...     .....|
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y  465 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----RSLPAY  465 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----CCCcHH
Confidence              7999999997321        2334677899999998888753    333 2489999999887632     345789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH---HHHHh-hhcceeeecCCCceeeCceeHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG---HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      +.+|...+.+.+..       |++++.++||.+-.+.........   ..... .......+    .  ......+|+|+
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~p~~va~  539 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY----Q--RRGYGPEKVAK  539 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc----c--ccCCCHHHHHH
Confidence            99999988877652       789999999988765322110000   00000 00000000    0  11256899999


Q ss_pred             HHHHHhcCCC
Q psy4233         222 AIVAACKDPD  231 (303)
Q Consensus       222 ~~~~~~~~~~  231 (303)
                      +++.++.++.
T Consensus       540 ~~~~~~~~~~  549 (582)
T PRK05855        540 AIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHcCC
Confidence            9999998644

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=2.2e-15  Score=127.95  Aligned_cols=213  Identities=12%  Similarity=-0.011  Sum_probs=140.2

Q ss_pred             CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||  ++.||.+++++|+++|++|+++.|+.. +..+.+.... ..++.++.+|+.|++++.++++      
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45689999999  899999999999999999999887642 2222221111 1257789999999988877653      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+||....            +.....+++|+.++..+.+++...  .-.++|++|+....+      ......
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------~~~~~~  157 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------WPAYDW  157 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------CCccch
Confidence             38999999986421            112346889999888888776431  124789888653221      122356


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..+.||.+..+...................|+      . +.+...+|+|++++
T Consensus       158 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~-~~~~~p~evA~~v~  230 (256)
T PRK07889        158 MGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL------G-WDVKDPTPVARAVV  230 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc------c-cccCCHHHHHHHHH
Confidence            899999999887663       688999999988765321100000010001111221      0 13578999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCC
Q psy4233         225 AACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~  242 (303)
                      +++...  ...|+++.+.++
T Consensus       231 ~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        231 ALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHhCcccccccceEEEEcCc
Confidence            999753  236777777655

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.7e-16  Score=134.96  Aligned_cols=168  Identities=15%  Similarity=0.058  Sum_probs=121.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      .++++++++||||||.||.+++++|+++|++|+++.|+.....+...   ......+++++.+|+.|.+++.++++    
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999997543222111   11111358899999999998887654    


Q ss_pred             ---ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCC-------CCCCC
Q psy4233          87 ---YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNP-------PTYYI  146 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~-------~~~~~  146 (303)
                         .+|++||+||....       +..+..+.+|+.+...+.+.+..   .+..++|++||.......       ...+.
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~  169 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSY  169 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccC
Confidence               37999999996322       23345788899998777776642   233589999998654321       11223


Q ss_pred             CCCCchhHHHHHHHHHHHhh---------CCCEEEEeecceeeC
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE---------FPEATIFRPSDMYGS  181 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~---------~~~~~ilrp~~~~G~  181 (303)
                      .+...|+.+|...+.+.++.         ++.+..+.||.+..+
T Consensus       170 ~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        170 AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            44568999999998877543         478888999988754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=2.3e-15  Score=138.15  Aligned_cols=210  Identities=14%  Similarity=0.120  Sum_probs=143.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +.+++++||||+|.||..+++.|.++|++|++++|+.... .......   -+.+.+.+|++|.+++.++++       +
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR---VGGTALALDITAPDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999998853221 1111111   134678999999988877654       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCC----ceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGV----EKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||++|....        ......+++|+.++.++.+++.....    .+||++||...+...     .....|+.+
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----~~~~~Y~as  359 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----RGQTNYAAS  359 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCChHHHHH
Confidence            7999999996422        23346788999999999999876432    589999998765321     234789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+++..       ++.+..+.||.+-.+.......   ..........      .. ......+|+|+++++++.
T Consensus       360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~------~l-~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF---ATREAGRRMN------SL-QQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch---hHHHHHhhcC------Cc-CCCCCHHHHHHHHHHHhC
Confidence            99777766553       6889999999875432111111   0111111110      01 223557899999999987


Q ss_pred             CC--CCCCcEEEEeCCc
Q psy4233         229 DP--DAAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~  243 (303)
                      ..  ...|+++.++++.
T Consensus       430 ~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        430 PASGGVTGNVVRVCGQS  446 (450)
T ss_pred             hhhcCCCCCEEEECCCc
Confidence            43  2368888887654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.2e-15  Score=127.18  Aligned_cols=158  Identities=16%  Similarity=0.076  Sum_probs=117.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vi   92 (303)
                      |++++||||+|++|++++++|+++|++|++++|+..... .+..   ..++.++.+|++|.+++.++++     ++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-HHHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            468999999999999999999999999999999864422 1211   2457888999999988887665     389999


Q ss_pred             EccccCcc----------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          93 NLIGREFA----------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        93 ~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      |++|....          ......+.+|+.++..+++++...   +...++++||......  ..+......|+.+|...
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~--~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVE--LPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccc--cCCCCCccchHHHHHHH
Confidence            99986321          122356788999999988887542   2247888887543221  11223445799999999


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeC
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                      +.+++..       ++.+..++||.+-.+
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            9988764       477888999988655

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-15  Score=130.15  Aligned_cols=212  Identities=15%  Similarity=0.132  Sum_probs=142.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC--------ccccc-ch-hcCCCCceEEEecCCCCHHHHHHHh
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF--------YDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~--------~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      +++++++||||++.||.+++++|+++|++|+++.|+..        +.... .. ......++.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999887541        11111 11 1111235788999999998877655


Q ss_pred             c-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----c---C---CceEEEEecCccCCC
Q psy4233          86 K-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----M---G---VEKFIHISALNADPN  140 (303)
Q Consensus        86 ~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~---~---~~~~v~~Ss~~~~~~  140 (303)
                      +       .+|++||+||....        +..+..+++|+.++..+++++..    .   +   ..+||++||......
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            3       37999999996321        23456889999999888877642    1   1   148999999766532


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCc
Q psy4233         141 PPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       141 ~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      .     .....|+.+|...+.+.+..       ++++..+.|+ +..+...  .....+.    ...+     ... ..+
T Consensus       164 ~-----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~--~~~~~~~----~~~~-----~~~-~~~  225 (286)
T PRK07791        164 S-----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE--TVFAEMM----AKPE-----EGE-FDA  225 (286)
T ss_pred             C-----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch--hhHHHHH----hcCc-----ccc-cCC
Confidence            1     23468999999999887663       6889999997 4322111  1111111    0111     111 235


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ...+|+|+++++++...  ...|+.+.+.++...
T Consensus       226 ~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        226 MAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             CCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            78999999999998743  347878888766543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.68  E-value=1.5e-15  Score=135.62  Aligned_cols=183  Identities=16%  Similarity=0.052  Sum_probs=124.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .++++++++||||+|+||++++++|.++|++|++++|+..+......  ....+++.+.+|++|.+++.+.+.++|++||
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--GEDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--hcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            45678899999999999999999999999999999987543221111  1112467889999999999999999999999


Q ss_pred             ccccCcc-----ccchhhhhhhcchHHHHHHHHHh----cCC---c-eEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          94 LIGREFA-----TKNFTIADANVEIPARLARLSKE----MGV---E-KFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        94 ~a~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~----~~~---~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      +||....     +.....+++|+.++.++++++..    .+.   + .+|.+|+.. ..     | .....|+.+|...+
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~-----~-~~~~~Y~ASKaAl~  324 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VN-----P-AFSPLYELSKRALG  324 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc-----C-CCchHHHHHHHHHH
Confidence            9986321     23356889999999999998742    221   2 345554422 11     1 11246999999998


Q ss_pred             HHHHh--h--CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         161 KEVLR--E--FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       161 ~~~~~--~--~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      .+...  .  +..+..+.|    ||.....                     .. ...++.+|+|+.++.+++++.
T Consensus       325 ~l~~l~~~~~~~~I~~i~~----gp~~t~~---------------------~~-~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        325 DLVTLRRLDAPCVVRKLIL----GPFKSNL---------------------NP-IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHhCCCCceEEEEe----CCCcCCC---------------------Cc-CCCCCHHHHHHHHHHHHHCCC
Confidence            86432  2  222333333    4422110                     00 124789999999999998654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.4e-15  Score=125.75  Aligned_cols=180  Identities=12%  Similarity=0.032  Sum_probs=122.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+..+.....   .. .....+.+|++|.+++.+.+.++|++||+|
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnA   87 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN---DE-SPNEWIKWECGKEESLDKQLASLDVLILNH   87 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh---cc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence            35679999999999999999999999999999998752221111   11 113678899999999999998999999999


Q ss_pred             ccCc-----cccchhhhhhhcchHHHHHHHHHhc-------CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233          96 GREF-----ATKNFTIADANVEIPARLARLSKEM-------GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        96 ~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      |...     .+.....+++|+.++.++++++...       +-..++..||......      .....|+.+|...+.+.
T Consensus        88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~------~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367         88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP------ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC------CCCchhHHHHHHHHHHH
Confidence            8632     2334578899999999999977432       1123444454433321      12357999999975332


Q ss_pred             ---Hh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         164 ---LR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       164 ---~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                         ++       .++.+..+.||.+..+.             .    +         ...+..+|+|+.++.++.++.
T Consensus       162 ~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------------~----~---------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        162 SLKKNLLDKNERKKLIIRKLILGPFRSEL-------------N----P---------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHhhcccccEEEEecCCCccccc-------------C----c---------cCCCCHHHHHHHHHHHHhcCC
Confidence               11       24555556665432110             0    0         124788999999999997643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.67  E-value=1.1e-14  Score=122.16  Aligned_cols=195  Identities=15%  Similarity=0.112  Sum_probs=131.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh---cccCEEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI---KYSNVVIN   93 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~D~vi~   93 (303)
                      |+|+||||+|+||++++++|+++|  ..|....|.....   .    ..+++.++++|++|.+++.++.   .++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---F----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---c----ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            589999999999999999999985  5666666643321   1    1246889999999998877654   45899999


Q ss_pred             ccccCccc--------------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          94 LIGREFAT--------------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        94 ~a~~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ++|.....              .....+++|+.++..+.+++..    .+..+++++||....-...  +..+...|+.+
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~--~~~~~~~Y~as  151 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN--RLGGWYSYRAS  151 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC--CCCCcchhhhh
Confidence            99974211              1124677888888777776643    3345899988753311111  12344689999


Q ss_pred             HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |+.++.+.+..         ++.+..+.||.+..+.....         . ...+       . ..++..+|+|++++.+
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------~-~~~~-------~-~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---------Q-QNVP-------K-GKLFTPEYVAQCLLGI  213 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---------h-hccc-------c-CCCCCHHHHHHHHHHH
Confidence            99999988763         35677788988876643210         0 1111       1 2357899999999999


Q ss_pred             hcCCC--CCCcEEEEe
Q psy4233         227 CKDPD--AAGKIYQAV  240 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~  240 (303)
                      +....  ..|..+.+.
T Consensus       214 ~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        214 IANATPAQSGSFLAYD  229 (235)
T ss_pred             HHcCChhhCCcEEeeC
Confidence            98643  356555443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.66  E-value=6.6e-15  Score=137.67  Aligned_cols=210  Identities=14%  Similarity=0.115  Sum_probs=142.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      .+++++||||++.||.+++++|+++|++|+++.|+.....+.....+  .++..+.+|++|++++.++++       .+|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999997543322222111  357789999999988877664       389


Q ss_pred             EEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHhc----CCc-eEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          90 VVINLIGREFA----------TKNFTIADANVEIPARLARLSKEM----GVE-KFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        90 ~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~----~~~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++||+||....          ...+..+++|+.++..+++++...    +.. ++|++||.......     .....|+.
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----~~~~~Y~a  156 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----PKRTAYSA  156 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----CCCchHHH
Confidence            99999986211          223568899999999988877543    333 89999998765421     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHH-HHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..       +++++.+.||.+..+.......-... .......++.        ..+...+|+|++++.+
T Consensus       157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~v~~l  228 (520)
T PRK06484        157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL--------GRLGRPEEIAEAVFFL  228 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            999999887653       68899999998865532110000000 0000111111        1356889999999998


Q ss_pred             hcCC--CCCCcEEEEeC
Q psy4233         227 CKDP--DAAGKIYQAVG  241 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~  241 (303)
                      +...  ...|+.+.+.+
T Consensus       229 ~~~~~~~~~G~~~~~~g  245 (520)
T PRK06484        229 ASDQASYITGSTLVVDG  245 (520)
T ss_pred             hCccccCccCceEEecC
Confidence            8742  22455554443

>KOG1205|consensus

Probab=99.65  E-value=3.5e-15  Score=125.22  Aligned_cols=149  Identities=21%  Similarity=0.237  Sum_probs=112.0

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc---ccchhcCCCCceEEEecCCCCHHHHHHHh----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV---RDLRLCGDLGQVLFQPYHPRNDDEIRKAI----   85 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----   85 (303)
                      ++.+.++.|+|||||..||.+++.+|.++|.+++.+.|+.....   ++++.....+++.++++|++|.+++.+.+    
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            34467899999999999999999999999998877777644321   22222222236999999999999888554    


Q ss_pred             ---cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          86 ---KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        86 ---~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         .+.|++||+||....        ......+++|+.|+..+.+++    ++.+-.|||.+||+..+-.     .....
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~-----~P~~~  161 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP-----LPFRS  161 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC-----CCccc
Confidence               458999999996321        233468999999998888877    3444459999999988763     12224


Q ss_pred             chhHHHHHHHHHHHhh
Q psy4233         151 QFYRTKYQGEKEVLRE  166 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~  166 (303)
                      .|+.||.+.+.+....
T Consensus       162 ~Y~ASK~Al~~f~etL  177 (282)
T KOG1205|consen  162 IYSASKHALEGFFETL  177 (282)
T ss_pred             ccchHHHHHHHHHHHH
Confidence            8999999999988764

>KOG4288|consensus

Probab=99.65  E-value=1.3e-15  Score=121.00  Aligned_cols=205  Identities=20%  Similarity=0.202  Sum_probs=153.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      .+.++.|++||.|+++++...+.++.|-.+.|+..+....    .+...+.++.+|.....-++..+.++..++.+++..
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~----sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf  128 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLS----SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF  128 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhh----CCCcccchhhccccccCcchhhhcCCcccHHHhcCc
Confidence            3689999999999999999999999999999986532221    223558889999988887888888999999998763


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh-hCCCEEEEeecc
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPSD  177 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-~~~~~~ilrp~~  177 (303)
                        .+...+..+|-....+-++++.++|+++|+|+|.... +-.   | .....|...|+++|..+.. ++.+-+++|||.
T Consensus       129 --gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~~---~-~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGF  201 (283)
T KOG4288|consen  129 --GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GLP---P-LIPRGYIEGKREAEAELLKKFRFRGIILRPGF  201 (283)
T ss_pred             --cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CCC---C-ccchhhhccchHHHHHHHHhcCCCceeeccce
Confidence              3455688889999999999999999999999995433 211   1 2235899999999976655 689999999999


Q ss_pred             eeeCCC-----chhhHHHHHHHh-------hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEE
Q psy4233         178 MYGSGD-----KFLRYYGHMWRH-------VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ  238 (303)
Q Consensus       178 ~~G~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~  238 (303)
                      +||-+.     .++..+...+..       ....+|+.+   .....++.+++||.+.+.+++++...| ++.
T Consensus       202 iyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg---~l~~ppvnve~VA~aal~ai~dp~f~G-vv~  270 (283)
T KOG4288|consen  202 IYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG---PLLAPPVNVESVALAALKAIEDPDFKG-VVT  270 (283)
T ss_pred             eecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc---cccCCCcCHHHHHHHHHHhccCCCcCc-eee
Confidence            999532     123333332222       122344442   233678999999999999999887765 443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.64  E-value=5.8e-15  Score=125.45  Aligned_cols=197  Identities=16%  Similarity=0.060  Sum_probs=131.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          20 VATVFGASGYMGSYLCNKLGK----QGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      .++||||+|.||.+++++|++    .|++|+++.|+.....+......   ...++.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    79999999997543222111111   123588899999999988876643     


Q ss_pred             ------cCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHh----c-C-CceEEEEecCccCCCCCCC
Q psy4233          88 ------SNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKE----M-G-VEKFIHISALNADPNPPTY  144 (303)
Q Consensus        88 ------~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~~v~~Ss~~~~~~~~~~  144 (303)
                            .|++||+||....           +.....+++|+.++..+.+++..    . + ..++|++||......    
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~----  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP----  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----
Confidence                  2589999985211           12235788999998877766543    2 2 248999999876532    


Q ss_pred             CCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH--HHHHHHhhhcceeeecCCCceeeCce
Q psy4233         145 YISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY--YGHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                       ......|+.+|...+.+.+..       ++.+..+.||++-.+..... ..  -...........|.        ..+.
T Consensus       158 -~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  228 (256)
T TIGR01500       158 -FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK--------GKLV  228 (256)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc--------CCCC
Confidence             223467999999999888763       57888899998865421100 00  00000000011111        2368


Q ss_pred             eHHHHHHHHHHHhcC
Q psy4233         215 YVGDVAAAIVAACKD  229 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~  229 (303)
                      ..+|+|.+++.++++
T Consensus       229 ~p~eva~~~~~l~~~  243 (256)
T TIGR01500       229 DPKVSAQKLLSLLEK  243 (256)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999963

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.63  E-value=8.5e-15  Score=116.78  Aligned_cols=155  Identities=14%  Similarity=0.082  Sum_probs=116.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc---h-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL---R-LCGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~---~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      ++++||||+|++|.+++++|+++|. .|+++.|+........   . ......++.++.+|+++.+++.+.+..      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999995 6888888654322110   1 111124578899999999888776543      


Q ss_pred             -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                       +|.|||+++....        ...+..++.|+.++.++++++++.+.++++++||.......     .....|+.+|..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~-----~~~~~y~~sk~~  155 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN-----PGQANYAAANAF  155 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC-----CCchhhHHHHHH
Confidence             5999999985321        22346788999999999999988887899999997664321     234689999999


Q ss_pred             HHHHHHhh---CCCEEEEeecce
Q psy4233         159 GEKEVLRE---FPEATIFRPSDM  178 (303)
Q Consensus       159 ~e~~~~~~---~~~~~ilrp~~~  178 (303)
                      .+.+++..   +++.+.+.||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      156 LDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHhcCCceEEEeeccc
Confidence            99988653   788888888765

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG3019|consensus

Probab=99.63  E-value=4.3e-15  Score=117.84  Aligned_cols=238  Identities=12%  Similarity=0.086  Sum_probs=163.0

Q ss_pred             CcEEEEEcCCChhHHHHHH-----HHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233          18 GVVATVFGASGYMGSYLCN-----KLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~-----~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      ..+.+.-+++|+|+..|..     .+-+.+    |+|++++|++..           .++.+.+.|..-..      -.|
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~-----------~ritw~el~~~Gip------~sc   74 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGK-----------ARITWPELDFPGIP------ISC   74 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCC-----------cccccchhcCCCCc------eeh
Confidence            3456777899999987776     232333    899999998653           23444444443221      135


Q ss_pred             CEEEEcccc--------CccccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCC------CCCCCCCCch
Q psy4233          89 NVVINLIGR--------EFATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPP------TYYISGGSQF  152 (303)
Q Consensus        89 D~vi~~a~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~------~~~~~~~~~y  152 (303)
                      |+.++++|.        +.+.-.+......++.+..|+++..+++  .+.+|.+|.+++|-..+      +.+....+..
T Consensus        75 ~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~  154 (315)
T KOG3019|consen   75 VAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDIL  154 (315)
T ss_pred             HHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHH
Confidence            555555553        2222233455667788899999999886  45899999999986532      2222222222


Q ss_pred             hH--HHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         153 YR--TKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       153 ~~--~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+  .+++.......-..+.+++|.|.+.|.+.+....+...++.  ..=--.|+|.+. +.|||++|++..|.++++++
T Consensus       155 srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~--g~GGPlGsG~Q~-fpWIHv~DL~~li~~ale~~  231 (315)
T KOG3019|consen  155 SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQM--GAGGPLGSGQQW-FPWIHVDDLVNLIYEALENP  231 (315)
T ss_pred             HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhh--ccCCcCCCCCee-eeeeehHHHHHHHHHHHhcC
Confidence            22  12222222212248999999999999987654443322221  111224788888 99999999999999999988


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhh
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN  285 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~  285 (303)
                      ..+| +.|-..+++.+..|+.+.+.++++++.-        +| +|.+..++.++
T Consensus       232 ~v~G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp~~--------~p-vP~fvvqA~fG  276 (315)
T KOG3019|consen  232 SVKG-VINGVAPNPVRNGEFCQQLGSALSRPSW--------LP-VPDFVVQALFG  276 (315)
T ss_pred             CCCc-eecccCCCccchHHHHHHHHHHhCCCcc--------cC-CcHHHHHHHhC
Confidence            7777 9999999999999999999999999988        88 99999888776

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.62  E-value=5.8e-14  Score=122.80  Aligned_cols=203  Identities=12%  Similarity=0.086  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||++.||.+++++|+++| ++|++++|+.....+...... ...+++++.+|++|.+++.++++       ++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            6789999999999999999999999 999999987543221111111 11357889999999988876553       48


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcC--CceEEEEecCccCCCC------------
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMG--VEKFIHISALNADPNP------------  141 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~~Ss~~~~~~~------------  141 (303)
                      |++||+||....         +..+..+++|+.++..+++++.    +.+  ..+||++||...+...            
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  162 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG  162 (314)
T ss_pred             CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence            999999996321         1224578899999888766553    332  3599999998764210            


Q ss_pred             ----------------CCCCCCCCCchhHHHHHHHHHHHhh--------CCCEEEEeeccee-eCCC-chhhHHHHHHHh
Q psy4233         142 ----------------PTYYISGGSQFYRTKYQGEKEVLRE--------FPEATIFRPSDMY-GSGD-KFLRYYGHMWRH  195 (303)
Q Consensus       142 ----------------~~~~~~~~~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~-G~~~-~~~~~~~~~~~~  195 (303)
                                      +..+..+...|+.+|.....+.+..        ++.++.++||++. .+.. ........+...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~  242 (314)
T TIGR01289       163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPP  242 (314)
T ss_pred             ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHH
Confidence                            0012234467999999966544332        5778889999885 2221 111111111100


Q ss_pred             hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ..+..       .  ..+.+.++.|+.++.++..
T Consensus       243 ~~~~~-------~--~~~~~~~~~a~~l~~~~~~  267 (314)
T TIGR01289       243 FQKYI-------T--KGYVSEEEAGERLAQVVSD  267 (314)
T ss_pred             HHHHH-------h--ccccchhhhhhhhHHhhcC
Confidence            00001       0  1257899999999998765

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05599 hypothetical protein; Provisional

Probab=99.60  E-value=5.7e-14  Score=118.62  Aligned_cols=194  Identities=14%  Similarity=0.107  Sum_probs=129.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      |+++||||++.||.+++++|. +|++|++++|+.....+..+...  ...++.++.+|+.|.+++.++++       +.|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 59999999997543322111111  11347889999999988876543       379


Q ss_pred             EEEEccccCccc-----c---chhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFAT-----K---NFTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      ++||++|.....     .   .....++|+.+...++++    +.+.+ -.++|++||......     ......|+.+|
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asK  154 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA-----RRANYVYGSTK  154 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC-----CcCCcchhhHH
Confidence            999999964221     1   123455677666655444    33332 358999999866532     12346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++.+..+.||.+..+...           .....        . . ....+|+|++++.++..
T Consensus       155 aa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-----------~~~~~--------~-~-~~~pe~~a~~~~~~~~~  213 (246)
T PRK05599        155 AGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-----------GMKPA--------P-M-SVYPRDVAAAVVSAITS  213 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-----------CCCCC--------C-C-CCCHHHHHHHHHHHHhc
Confidence            9998877653       578888999888754211           00000        0 0 25789999999999986


Q ss_pred             CCCCCcEEEEe
Q psy4233         230 PDAAGKIYQAV  240 (303)
Q Consensus       230 ~~~~g~~~~i~  240 (303)
                      +.. +..+.+.
T Consensus       214 ~~~-~~~~~~~  223 (246)
T PRK05599        214 SKR-STTLWIP  223 (246)
T ss_pred             CCC-CceEEeC
Confidence            543 3344443

>KOG1201|consensus

Probab=99.58  E-value=1.1e-13  Score=115.26  Aligned_cols=197  Identities=14%  Similarity=0.100  Sum_probs=143.9

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++.+.++..||||||.+.+|+.++.+++++|.++.+.+.+.....+..+......++..+.+|++|.+++.+..+     
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            556788999999999999999999999999998989888876665554443322368999999999988876553     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        .+|++||+||....        +.-+..+++|+.+.....++.    .+.+-.++|.++|....-..     ....+|
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~-----~gl~~Y  186 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP-----AGLADY  186 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-----ccchhh
Confidence              38999999996222        233468888888777666654    44455699999998776531     334789


Q ss_pred             hHHHHHHHHHHHhh----------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE----------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       153 ~~~K~~~e~~~~~~----------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +.||..+....+..          +++.+.+.|+.+-..      .+      .+ ..+     .......+..+.+|+.
T Consensus       187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg------mf------~~-~~~-----~~~l~P~L~p~~va~~  248 (300)
T KOG1201|consen  187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG------MF------DG-ATP-----FPTLAPLLEPEYVAKR  248 (300)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc------cc------CC-CCC-----CccccCCCCHHHHHHH
Confidence            99999988766542          477888888766411      11      11 111     1222678999999999


Q ss_pred             HHHHhcCCC
Q psy4233         223 IVAACKDPD  231 (303)
Q Consensus       223 ~~~~~~~~~  231 (303)
                      ++.++..++
T Consensus       249 Iv~ai~~n~  257 (300)
T KOG1201|consen  249 IVEAILTNQ  257 (300)
T ss_pred             HHHHHHcCC
Confidence            999998654

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.58  E-value=9.4e-14  Score=120.83  Aligned_cols=205  Identities=17%  Similarity=0.164  Sum_probs=130.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc---------ccccch-h-cCCCCceEEEecCCCCHHHHHH
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY---------DVRDLR-L-CGDLGQVLFQPYHPRNDDEIRK   83 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---------~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~   83 (303)
                      ++++++++||||++.||.+++++|++.|++|+++.|+...         ..+... . .....++.++++|++|++++.+
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            3567899999999999999999999999999999987421         111111 1 1111347789999999988887


Q ss_pred             Hhc-------ccCEEEEcc-ccC------cc------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCC
Q psy4233          84 AIK-------YSNVVINLI-GRE------FA------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADP  139 (303)
Q Consensus        84 ~~~-------~~D~vi~~a-~~~------~~------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~  139 (303)
                      +++       .+|++||++ |..      ..      ......+++|+.+...+++++-.    .+-.+||++||.....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            653       379999999 631      00      11224567788887777766532    3335899999865422


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH---HHHHhhhcceeeecCCCce
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG---HMWRHVFRKLAVYKKGEET  209 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  209 (303)
                      ...  +......|+.+|.....+.+..       ++.+..+.||.+-.+...  ..+.   ..+.......|.      .
T Consensus       165 ~~~--~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~p~------~  234 (305)
T PRK08303        165 NAT--HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML--DAFGVTEENWRDALAKEPH------F  234 (305)
T ss_pred             cCc--CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH--HhhccCccchhhhhccccc------c
Confidence            111  1112357999999999887653       688889999888644210  0000   000000001111      0


Q ss_pred             eeCceeHHHHHHHHHHHhcCC
Q psy4233         210 IKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       210 ~~~~i~~~Dva~~~~~~~~~~  230 (303)
                       .-+...+|+|+++++++..+
T Consensus       235 -~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        235 -AISETPRYVGRAVAALAADP  254 (305)
T ss_pred             -ccCCCHHHHHHHHHHHHcCc
Confidence             12457899999999999754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.57  E-value=4.1e-14  Score=123.86  Aligned_cols=189  Identities=14%  Similarity=-0.010  Sum_probs=130.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCC--HHHHH---HHhcc-
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRN--DDEIR---KAIKY-   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d--~~~~~---~~~~~-   87 (303)
                      .++.++||||||.||.+++++|+++|++|++++|+.....+...   ......++..+.+|+++  .+.+.   +.+.+ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            36799999999999999999999999999999997543222111   11111357788899975  33333   34444 


Q ss_pred             -cCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          88 -SNVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        88 -~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       +|++||+||....          +..+..+++|+.++..+.+++.    +.+..++|++||...+..+   +......|
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---~~p~~~~Y  208 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---SDPLYAVY  208 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---CCccchHH
Confidence             5599999986321          1123578899999998888764    3455699999998775311   00224789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       |++++.+.||.+-.+....          ..         ..  .-..+.+++|+.++.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~----------~~---------~~--~~~~~p~~~A~~~~~  267 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI----------RR---------SS--FLVPSSDGYARAALR  267 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc----------cC---------CC--CCCCCHHHHHHHHHH
Confidence            99999999877663       6899999999887552210          00         01  113578999999999


Q ss_pred             HhcC
Q psy4233         226 ACKD  229 (303)
Q Consensus       226 ~~~~  229 (303)
                      .+..
T Consensus       268 ~~~~  271 (320)
T PLN02780        268 WVGY  271 (320)
T ss_pred             HhCC
Confidence            9963

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.55  E-value=2.7e-14  Score=120.20  Aligned_cols=205  Identities=15%  Similarity=0.131  Sum_probs=142.6

Q ss_pred             cCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh--------cccCEEEEc
Q psy4233          25 GAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI--------KYSNVVINL   94 (303)
Q Consensus        25 Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~D~vi~~   94 (303)
                      |++  +.||.++++.|+++|++|++..|+..+..+.+.......+.+++.+|++|++++.+++        .++|++||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999986643222211111112447999999998888764        347999999


Q ss_pred             cccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          95 IGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        95 a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      ++....            +.....+++|+.+...+++++...  .-.++|++||......     ......|+.+|...+
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----~~~~~~y~~sKaal~  155 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----MPGYSAYSASKAALE  155 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----STTTHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----CccchhhHHHHHHHH
Confidence            986432            123467888998888888887442  1148999998876542     133458999999999


Q ss_pred             HHHHh--------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233         161 KEVLR--------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--  230 (303)
Q Consensus       161 ~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--  230 (303)
                      .+.+.        .|+++..|.||.+..+..........+.+......|+        ..+...+|+|+++++++...  
T Consensus       156 ~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl--------~r~~~~~evA~~v~fL~s~~a~  227 (241)
T PF13561_consen  156 GLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL--------GRLGTPEEVANAVLFLASDAAS  227 (241)
T ss_dssp             HHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT--------SSHBEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc--------CCCcCHHHHHHHHHHHhCcccc
Confidence            88875        3688999999988865322222122233223334443        23579999999999999854  


Q ss_pred             CCCCcEEEEeCC
Q psy4233         231 DAAGKIYQAVGP  242 (303)
Q Consensus       231 ~~~g~~~~i~~~  242 (303)
                      .-.|+++.+.+|
T Consensus       228 ~itG~~i~vDGG  239 (241)
T PF13561_consen  228 YITGQVIPVDGG  239 (241)
T ss_dssp             TGTSEEEEESTT
T ss_pred             CccCCeEEECCC
Confidence            347888888776

...

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.4e-13  Score=111.69  Aligned_cols=159  Identities=8%  Similarity=0.025  Sum_probs=112.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------K   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------~   86 (303)
                      ++++++++||||++.||.+++++|+++|++|+++.|+.....+..+.. ....++..+.+|+.|++++.+++       .
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999999998754322211111 11235778899999998887655       3


Q ss_pred             -ccCEEEEccccCcc------ccc---hhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------TKN---FTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------~~~---~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       .+|++||++|....      ...   ...+++|..++..+++.    +++.+ -..+|++||...+.        ....
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------~~~~  153 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------DLTG  153 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC--------Ccch
Confidence             58999999974211      111   23445566665555443    33333 35899999865432        2467


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                      |+.+|...+.+.+..       ++++..+.||.+-.+
T Consensus       154 Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        154 VESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            999999999887663       689999999988765

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.53  E-value=3.5e-13  Score=113.42  Aligned_cols=190  Identities=14%  Similarity=0.030  Sum_probs=133.0

Q ss_pred             HHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEccccCccccchhhhhh
Q psy4233          34 LCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINLIGREFATKNFTIADA  109 (303)
Q Consensus        34 l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~a~~~~~~~~~~~~~~  109 (303)
                      ++++|+++|++|++++|+.... .         ..+++++|++|.+++.++++    ++|+|||+||..........+++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~-~---------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v   70 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM-T---------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV   70 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh-h---------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence            4788999999999999975431 1         14568999999999998876    48999999997655566788999


Q ss_pred             hcchHHHHHHHHHhc--CCceEEEEecCccCCCCCC----------------------CCCCCCCchhHHHHHHHHHHHh
Q psy4233         110 NVEIPARLARLSKEM--GVEKFIHISALNADPNPPT----------------------YYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus       110 n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~----------------------~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      |+.++..+++++...  ...+||++||...++.+..                      .|......|+.+|...+.+.+.
T Consensus        71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (241)
T PRK12428         71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR  150 (241)
T ss_pred             chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence            999999999988653  2259999999988753211                      2334557899999998865532


Q ss_pred             --------hCCCEEEEeecceeeCCCchhh-HHH-HHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCC
Q psy4233         166 --------EFPEATIFRPSDMYGSGDKFLR-YYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAA  233 (303)
Q Consensus       166 --------~~~~~~ilrp~~~~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  233 (303)
                              .++.+..++||.+.++...... ... ...  .....+       . ..+...+|+|++++.++..+  ...
T Consensus       151 la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~pe~va~~~~~l~s~~~~~~~  220 (241)
T PRK12428        151 QAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERV--DSDAKR-------M-GRPATADEQAAVLVFLCSDAARWIN  220 (241)
T ss_pred             HHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhh--hhcccc-------c-CCCCCHHHHHHHHHHHcChhhcCcc
Confidence                    2689999999999887432111 000 000  000111       1 23578999999999988643  235


Q ss_pred             CcEEEEeCCc
Q psy4233         234 GKIYQAVGPK  243 (303)
Q Consensus       234 g~~~~i~~~~  243 (303)
                      |+...+.++.
T Consensus       221 G~~i~vdgg~  230 (241)
T PRK12428        221 GVNLPVDGGL  230 (241)
T ss_pred             CcEEEecCch
Confidence            7666666553

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.52  E-value=1.5e-12  Score=112.61  Aligned_cols=215  Identities=9%  Similarity=0.039  Sum_probs=135.5

Q ss_pred             ccCCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCCcccc-----------cchhcCC---CCceEEEecCC--
Q psy4233          14 SSFNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR-----------DLRLCGD---LGQVLFQPYHP--   75 (303)
Q Consensus        14 ~~~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~~~~~---~~~~~~~~~Dl--   75 (303)
                      +++++++++||||  +..||.+++++|.+.|.+|++ .|+.+....           .......   ......+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4578999999999  799999999999999999988 554221100           0000000   01145678888  


Q ss_pred             CCHH------------------HHHHHhc-------ccCEEEEccccCc----------cccchhhhhhhcchHHHHHHH
Q psy4233          76 RNDD------------------EIRKAIK-------YSNVVINLIGREF----------ATKNFTIADANVEIPARLARL  120 (303)
Q Consensus        76 ~d~~------------------~~~~~~~-------~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~  120 (303)
                      .+++                  ++.++++       .+|++||+||...          .+..+..+++|+.++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3222                  4454433       3799999996311          123457889999999888887


Q ss_pred             HHhc--CCceEEEEecCccCCCCCCCCCCC-C-CchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhH
Q psy4233         121 SKEM--GVEKFIHISALNADPNPPTYYISG-G-SQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRY  188 (303)
Q Consensus       121 ~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~-~-~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~  188 (303)
                      +...  .-.++|++||......      .+ . ..|+.+|...+.+.+..        ++++..+.||.+..+.......
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~  237 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF  237 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCC------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc
Confidence            6542  1148999999766432      22 2 36999999999887653        4678888998887653221100


Q ss_pred             HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ............|+        ..+...+|+|.++++++...  ...|+.+.+.++.
T Consensus       238 ~~~~~~~~~~~~pl--------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        238 IDDMIEYSYANAPL--------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             cHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            01111101111221        13578999999999999743  2367777776653

>KOG0725|consensus

Probab=99.52  E-value=2.5e-12  Score=109.36  Aligned_cols=220  Identities=15%  Similarity=0.050  Sum_probs=150.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc----CCCCceEEEecCCCCHHHHHHHh----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC----GDLGQVLFQPYHPRNDDEIRKAI----   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~----   85 (303)
                      ....++.++||||+..||.+++++|.+.|.+|++..|+.+........+    ...+++..+.+|+++.++.++++    
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999865432221111    11245889999999877665543    


Q ss_pred             ----cccCEEEEccccCcc---------ccchhhhhhhcch-HHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCC
Q psy4233          86 ----KYSNVVINLIGREFA---------TKNFTIADANVEI-PARLARLSKE----MGVEKFIHISALNADPNPPTYYIS  147 (303)
Q Consensus        86 ----~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~-~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~  147 (303)
                          .+.|+++++||....         +.+...+++|+.+ ...+.+++..    .+-..++++||........    .
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~----~  159 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP----G  159 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC----C
Confidence                348999999996322         3345788999994 5566666543    3345899999887765311    1


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch--h-hHHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF--L-RYYGHMWRH--VFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~--~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~  215 (303)
                      ....|+.+|...+++.+..       ++++..+-||.+..+....  . .....+.+.  ....+|.        -.+..
T Consensus       160 ~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~--------gr~g~  231 (270)
T KOG0725|consen  160 SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL--------GRVGT  231 (270)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc--------CCccC
Confidence            1168999999999998873       6899999999998775110  0 000111110  1111121        34688


Q ss_pred             HHHHHHHHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233         216 VGDVAAAIVAACKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~  245 (303)
                      .+|+|.++++++..+.  ..|+.+.+.++..+
T Consensus       232 ~~eva~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  232 PEEVAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HHHHHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            9999999999998643  35777777666543

>KOG1200|consensus

Probab=99.52  E-value=1.6e-12  Score=101.09  Aligned_cols=210  Identities=13%  Similarity=0.144  Sum_probs=144.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +.+..+||||+..||++++..|.++|++|.+.+++.....+.....+.+.+-..+.+|+++++++...++       .++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            3568999999999999999999999999999988755443333344444456778999999888776543       279


Q ss_pred             EEEEccccCc--------cccchhhhhhhcchHHHHHHHHHhc----CC--ceEEEEecCccCCCCCCCCCCCCCchhH-
Q psy4233          90 VVINLIGREF--------ATKNFTIADANVEIPARLARLSKEM----GV--EKFIHISALNADPNPPTYYISGGSQFYR-  154 (303)
Q Consensus        90 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~----~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~-  154 (303)
                      ++++|||..-        .+.+.....+|+.+.....+++-+.    +.  -+||.+||+-..-..     ..+..|+. 
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN-----~GQtnYAAs  167 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN-----FGQTNYAAS  167 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc-----ccchhhhhh
Confidence            9999999732        2456678899999998888877553    11  289999997543211     11244544 


Q ss_pred             -------HHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 -------TKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 -------~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                             +|.++.+. ...++++..+-||.+-.|......  ........+.+|.        ..+-..+|+|..++++.
T Consensus       168 K~GvIgftktaArEl-a~knIrvN~VlPGFI~tpMT~~mp--~~v~~ki~~~iPm--------gr~G~~EevA~~V~fLA  236 (256)
T KOG1200|consen  168 KGGVIGFTKTAAREL-ARKNIRVNVVLPGFIATPMTEAMP--PKVLDKILGMIPM--------GRLGEAEEVANLVLFLA  236 (256)
T ss_pred             cCceeeeeHHHHHHH-hhcCceEeEeccccccChhhhhcC--HHHHHHHHccCCc--------cccCCHHHHHHHHHHHh
Confidence                   45554443 445899999999999887543111  1122213345553        34678899999999998


Q ss_pred             cCCCC--CCcEEEEeCC
Q psy4233         228 KDPDA--AGKIYQAVGP  242 (303)
Q Consensus       228 ~~~~~--~g~~~~i~~~  242 (303)
                      .....  .|..+.+.+|
T Consensus       237 S~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  237 SDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccccccceeEEEecc
Confidence            64332  5777877765

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.50  E-value=1.5e-13  Score=108.95  Aligned_cols=143  Identities=19%  Similarity=0.146  Sum_probs=108.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecC--CCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRG--NFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~--~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      |+++||||+|-||.+++++|+++| ..|+++.|+  .+...+.... .....+++++++|+++.+++.++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999996 577777887  1211111111 1122679999999999988887664       3


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      .|++||++|....        +.....+++|+.+...+.+++...+-.++|++||......     ......|+.+|...
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y~askaal  155 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG-----SPGMSAYSASKAAL  155 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS-----STTBHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC-----CCCChhHHHHHHHH
Confidence            7999999997432        2334789999999999999988855679999999888752     23346899999999


Q ss_pred             HHHHHhh
Q psy4233         160 EKEVLRE  166 (303)
Q Consensus       160 e~~~~~~  166 (303)
                      +.+.+..
T Consensus       156 ~~~~~~l  162 (167)
T PF00106_consen  156 RGLTQSL  162 (167)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988763

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1611|consensus

Probab=99.50  E-value=1.9e-12  Score=103.23  Aligned_cols=202  Identities=16%  Similarity=0.133  Sum_probs=136.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcc-cccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYD-VRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      |.++.|+||||+..||-.|+++|++. |.++++..++..+. ..++..+ ...+++++++.|+++.+++++..+      
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            45678999999999999999999985 57776666654433 4444433 235889999999999888776653      


Q ss_pred             ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCc-----------eEEEEecCccCC
Q psy4233          87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVE-----------KFIHISALNADP  139 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~-----------~~v~~Ss~~~~~  139 (303)
                         +.|++|++||....         ......+++|..++..+.+++    +++..+           .+|++||...-.
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence               36999999996211         123468899998888777765    222222           788888876542


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeC
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                        ......+...|..+|.+.-...+..       ++=++.+.||||-....+                      .   -.
T Consensus       161 --~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg----------------------~---~a  213 (249)
T KOG1611|consen  161 --GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG----------------------K---KA  213 (249)
T ss_pred             --CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC----------------------C---Cc
Confidence              2222255689999999998888774       345666899998743221                      1   23


Q ss_pred             ceeHHHHHHHHHHHhcC--CCCCCcEEEEeCCccc
Q psy4233         213 PVYVGDVAAAIVAACKD--PDAAGKIYQAVGPKRY  245 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~--~~~~g~~~~i~~~~~~  245 (303)
                      .+++++-+.-++..+.+  +...|.-|+ .++.++
T Consensus       214 ~ltveeSts~l~~~i~kL~~~hnG~ffn-~dlt~i  247 (249)
T KOG1611|consen  214 ALTVEESTSKLLASINKLKNEHNGGFFN-RDGTPI  247 (249)
T ss_pred             ccchhhhHHHHHHHHHhcCcccCcceEc-cCCCcC
Confidence            47778888888777654  334454443 344444

>PLN00015 protochlorophyllide reductase

Probab=99.48  E-value=5.8e-13  Score=116.22  Aligned_cols=199  Identities=14%  Similarity=0.135  Sum_probs=127.2

Q ss_pred             EEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------ccCEEE
Q psy4233          22 TVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK-------YSNVVI   92 (303)
Q Consensus        22 lVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi   92 (303)
                      +||||++.||.+++++|+++| ++|++.+|+.....+...... ...++.++.+|++|.+++.++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 999999987543222211111 12357889999999998877654       379999


Q ss_pred             EccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcC--CceEEEEecCccCCCC-----C----------
Q psy4233          93 NLIGREFA---------TKNFTIADANVEIPARLARLS----KEMG--VEKFIHISALNADPNP-----P----------  142 (303)
Q Consensus        93 ~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~~v~~Ss~~~~~~~-----~----------  142 (303)
                      |+||....         +..+..+++|+.++..+++++    ++.+  ..++|++||...+...     .          
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99986321         122467889999987776654    3333  3599999998654210     0          


Q ss_pred             ---------------CCCCCCCCchhHHHHHHHHHHHh--------hCCCEEEEeecceee-CCCc-hhhHHHHHHHhhh
Q psy4233         143 ---------------TYYISGGSQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYG-SGDK-FLRYYGHMWRHVF  197 (303)
Q Consensus       143 ---------------~~~~~~~~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G-~~~~-~~~~~~~~~~~~~  197 (303)
                                     ..+..+...|+.+|...+...+.        .++.++.+.||++.. +... .......... ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~-~~  239 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP-PF  239 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH-HH
Confidence                           00112345699999985554332        257899999999953 3211 1111110000 00


Q ss_pred             cceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       198 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.        ..+.+.++.|+.++.++..
T Consensus       240 ~~~~~--------~~~~~pe~~a~~~~~l~~~  263 (308)
T PLN00015        240 QKYIT--------KGYVSEEEAGKRLAQVVSD  263 (308)
T ss_pred             HHHHh--------cccccHHHhhhhhhhhccc
Confidence            01110        1247889999999998864

>KOG4169|consensus

Probab=99.47  E-value=1.5e-12  Score=103.89  Aligned_cols=214  Identities=14%  Similarity=0.075  Sum_probs=145.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchhcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      +.+++++++||+.|.||..+.++|+++|.++.++..+.+.  ....++..-....+.++++|+++..++++.|++     
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999887777655433  233344333446699999999999888887764     


Q ss_pred             --cCEEEEccccCccccchhhhhhhcchHHHHHHHH----Hh-c-C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          88 --SNVVINLIGREFATKNFTIADANVEIPARLARLS----KE-M-G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        88 --~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~----~~-~-~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                        .|++||.||..++.+.+....+|+.+..+-...+    .+ . | -.-+|.+||......     ......|+.+|+-
T Consensus        82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P-----~p~~pVY~AsKaG  156 (261)
T KOG4169|consen   82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP-----MPVFPVYAASKAG  156 (261)
T ss_pred             CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc-----cccchhhhhcccc
Confidence              6999999999988888999999988776654444    22 2 2 236999999877652     1223467777754


Q ss_pred             H---------HHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCC----CceeeCceeHHHHHHHHHH
Q psy4233         159 G---------EKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKG----EETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       159 ~---------e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~Dva~~~~~  225 (303)
                      .         +.+....|+.+..++||.+-..       +..-++.+ ....-+.+.    -.. ..--+..++++.+++
T Consensus       157 VvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-------l~~~~~~~-~~~~e~~~~~~~~l~~-~~~q~~~~~a~~~v~  227 (261)
T KOG4169|consen  157 VVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-------LAENIDAS-GGYLEYSDSIKEALER-APKQSPACCAINIVN  227 (261)
T ss_pred             eeeeehhhhhhhhHhhcCEEEEEECCCcchHH-------HHHHHHhc-CCcccccHHHHHHHHH-cccCCHHHHHHHHHH
Confidence            3         4455556899999999766421       11111000 000000000    000 123567899999999


Q ss_pred             HhcCCCCCCcEEEEeCCc
Q psy4233         226 ACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~  243 (303)
                      +++. ...|.+|-+..+.
T Consensus       228 aiE~-~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  228 AIEY-PKNGAIWKVDSGS  244 (261)
T ss_pred             HHhh-ccCCcEEEEecCc
Confidence            9996 4568899887764

>KOG1207|consensus

Probab=99.47  E-value=1.6e-13  Score=104.70  Aligned_cols=211  Identities=15%  Similarity=0.110  Sum_probs=148.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~v   91 (303)
                      +..+..|++||+.-.||+.++.+|.+.|.+|+++.|.+.......+...  ..++.+.+|+.+.+.+.+.+..   .|-+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--SLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--cceeeeEecccHHHHHHHhhcccCchhhh
Confidence            4567899999999999999999999999999999998655444444332  3399999999998888887765   6999


Q ss_pred             EEccccC--------ccccchhhhhhhcchHHHHHHHHHh----cCC-ceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGRE--------FATKNFTIADANVEIPARLARLSKE----MGV-EKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      +++||..        ..+.-...+++|+.+..++.+...+    .++ ..||.+||....-     |..-.+.|+.+|.+
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R-----~~~nHtvYcatKaA  156 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR-----PLDNHTVYCATKAA  156 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc-----ccCCceEEeecHHH
Confidence            9999862        2234456889999998888887433    222 3799999987754     23445789999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+..-+..       .+++..+.|..++...... + +..--+.  ....+|+        --|..++.+.+++++++..
T Consensus       157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d-n-WSDP~K~k~mL~riPl--------~rFaEV~eVVnA~lfLLSd  226 (245)
T KOG1207|consen  157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD-N-WSDPDKKKKMLDRIPL--------KRFAEVDEVVNAVLFLLSD  226 (245)
T ss_pred             HHHHHHHHHHhhCcceeEeeccCCeEEEeccccc-c-cCCchhccchhhhCch--------hhhhHHHHHHhhheeeeec
Confidence            88766653       3677888888888642210 0 0000000  1112332        3478999999999999986


Q ss_pred             CCC--CCcEEEEeCC
Q psy4233         230 PDA--AGKIYQAVGP  242 (303)
Q Consensus       230 ~~~--~g~~~~i~~~  242 (303)
                      ...  .|...-+.+|
T Consensus       227 ~ssmttGstlpveGG  241 (245)
T KOG1207|consen  227 NSSMTTGSTLPVEGG  241 (245)
T ss_pred             CcCcccCceeeecCC
Confidence            443  4555555444

>KOG1208|consensus

Probab=99.42  E-value=5.7e-12  Score=108.84  Aligned_cols=203  Identities=15%  Similarity=0.074  Sum_probs=135.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hc--CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LC--GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+.+++++|||||..||.+++++|..+|..|+...|+.....+..+ +.  .....+.++++|++|..++.+...     
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            3457899999999999999999999999999999998643322211 11  223458889999999988876543     


Q ss_pred             --ccCEEEEccccCcc------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCC--------CCCC-
Q psy4233          87 --YSNVVINLIGREFA------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNP--------PTYY-  145 (303)
Q Consensus        87 --~~D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~--------~~~~-  145 (303)
                        ..|++|++||....      +.-+..+.+|..+...|.+.+    +.....|||++||... ...        +... 
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~  190 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKL  190 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccC
Confidence              26999999997322      334678888988887777665    4444369999999875 210        1111 


Q ss_pred             CCCCCchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCc-eeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP-VYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D  218 (303)
                      ......|+.+|.+......+.      ++....+.||.+..+...-...+.+.+.   ..+.         .-+ -+.+.
T Consensus       191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~---~~l~---------~~~~ks~~~  258 (314)
T KOG1208|consen  191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLA---KKLS---------WPLTKSPEQ  258 (314)
T ss_pred             ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHH---HHHH---------HHhccCHHH
Confidence            122224999999887666553      6888899999998873321222222111   0111         011 35677


Q ss_pred             HHHHHHHHhcCC
Q psy4233         219 VAAAIVAACKDP  230 (303)
Q Consensus       219 va~~~~~~~~~~  230 (303)
                      -|+..+.++.++
T Consensus       259 ga~t~~~~a~~p  270 (314)
T KOG1208|consen  259 GAATTCYAALSP  270 (314)
T ss_pred             HhhheehhccCc
Confidence            777777777665

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.41  E-value=4.6e-11  Score=103.32  Aligned_cols=216  Identities=11%  Similarity=0.031  Sum_probs=128.8

Q ss_pred             ccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCC--------Cccccc--ch---------------hcCCCC
Q psy4233          14 SSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGN--------FYDVRD--LR---------------LCGDLG   66 (303)
Q Consensus        14 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~--------~~~~~~--~~---------------~~~~~~   66 (303)
                      .++++++++||||+  ..||.+++++|.++|.+|++.+|.+        .+....  ..               ...+..
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            34568899999995  8999999999999999999866431        000000  00               000001


Q ss_pred             ceEEEecCCCC--------HHHHHHH-------hcccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHH
Q psy4233          67 QVLFQPYHPRN--------DDEIRKA-------IKYSNVVINLIGREF----------ATKNFTIADANVEIPARLARLS  121 (303)
Q Consensus        67 ~~~~~~~Dl~d--------~~~~~~~-------~~~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~  121 (303)
                      ..+-+..|+.+        .+++.++       +.+.|++||+||...          .+..+..+++|+.++.++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            11222222222        0123332       234899999997421          1233567899999999998877


Q ss_pred             Hhc--CCceEEEEecCccCCCCCCCCCCCC--CchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHH
Q psy4233         122 KEM--GVEKFIHISALNADPNPPTYYISGG--SQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYY  189 (303)
Q Consensus       122 ~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~--~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~  189 (303)
                      -..  .-.++|++||......      .+.  ..|+.+|...+.+.+..        |+++..+.||.+..+........
T Consensus       164 ~p~m~~~G~ii~iss~~~~~~------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~  237 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMRA------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI  237 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcCc------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc
Confidence            542  1237898888665432      122  26999999998877642        57788899998876532110000


Q ss_pred             HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ...........+.        ..+...+|+|.++++++...  ...|+++.+.++.
T Consensus       238 ~~~~~~~~~~~p~--------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        238 ERMVDYYQDWAPL--------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            0111001112221        13568899999999998743  3467788776653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.38  E-value=1.5e-11  Score=103.99  Aligned_cols=162  Identities=15%  Similarity=0.147  Sum_probs=114.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccch-hc-CCC-CceEEEecCCCC-HHHHHHHhc---
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLR-LC-GDL-GQVLFQPYHPRN-DDEIRKAIK---   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~-~~-~~~-~~~~~~~~Dl~d-~~~~~~~~~---   86 (303)
                      .+++++++||||++.||.++++.|+++|++|+++.|+.... .+... .. ... ..+.+..+|+++ .+++..+++   
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999988888875431 11111 00 000 247788899998 777665543   


Q ss_pred             ----ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 ----YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                          +.|++||+||....         +..+..+++|+.+...+.+++...- .+++|++||.... .....    ...|
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~----~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG----QAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC----cchH
Confidence                37999999996421         2334788899998888777443211 1299999999876 32111    4799


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                      +.+|...+.+.+..       ++.+..+.||.+-.+
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            99999998766552       688999999955433

>KOG1209|consensus

Probab=99.37  E-value=4.1e-12  Score=100.26  Aligned_cols=155  Identities=12%  Similarity=-0.004  Sum_probs=116.4

Q ss_pred             CCcEEEEEcC-CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------c
Q psy4233          17 NGVVATVFGA-SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------Y   87 (303)
Q Consensus        17 ~~~~vlVtGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~   87 (303)
                      +.++|||||+ .|.||.++++++.++|+.|++..|+.+...+. ...   .++...+.|+++++++.+...        +
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L-~~~---~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL-AIQ---FGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH-HHh---hCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            4678999875 69999999999999999999999985543332 221   358899999999998877543        2


Q ss_pred             cCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--C-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--G-VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      .|+++|+||..+..        .-+..+++|+-|..++.++....  . ...||++.|..++-.     ..-.+.|..+|
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp-----fpf~~iYsAsK  156 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP-----FPFGSIYSASK  156 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec-----cchhhhhhHHH
Confidence            69999999975432        23468899999888888777632  1 138999999988752     12236799999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceee
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYG  180 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G  180 (303)
                      ++.-++.+..       |++++.+-+|.+-.
T Consensus       157 AAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  157 AAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             HHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            9999887763       67777777776653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.35  E-value=9.7e-12  Score=97.69  Aligned_cols=159  Identities=18%  Similarity=0.096  Sum_probs=115.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++-+||||||+..||..+++++.+.|.+|++..|+.....+....   -+.+....+|+.|.++.++++.       .
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---CcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            35677999999999999999999999999999999985433332222   2568889999999886665442       3


Q ss_pred             cCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 SNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 ~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      .+++|+|||....          ....+-.++|+.++..|..+.-.    .+-.-+|.+||.-.+-..     .....|+
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-----~~~PvYc  153 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-----ASTPVYC  153 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-----cccccch
Confidence            6999999996211          11235667899999888777643    233479999998887632     3335789


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGS  181 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~  181 (303)
                      .+|+..-.|-.+       .++.+.=+-|+.|-.+
T Consensus       154 aTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         154 ATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            988887665433       3677777888888754

>KOG1610|consensus

Probab=99.35  E-value=3.5e-11  Score=100.96  Aligned_cols=160  Identities=13%  Similarity=0.092  Sum_probs=122.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      +...+-|||||.....|..++++|.++|+.|++-.-. ++..+.+..+..+++...++.|++++++++++.+-       
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~-~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLT-EEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeec-CchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            3456779999999999999999999999999998844 33444445444468899999999999999987642       


Q ss_pred             --cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          88 --SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        88 --~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        -=.|||+||....         +......++|+.|+..+.++..    ++. .|+|++||.+..-     +.....+|
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~-----~~p~~g~Y  178 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRV-----ALPALGPY  178 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCc-----cCcccccc
Confidence              4689999995322         2335788999999988887764    333 3999999998743     22345899


Q ss_pred             hHHHHHHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233         153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGS  181 (303)
Q Consensus       153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~  181 (303)
                      +.||..+|.+...       +|++++++-||.+-.+
T Consensus       179 ~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  179 CVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence            9999999986543       5899999999955443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.34  E-value=1.7e-11  Score=98.41  Aligned_cols=151  Identities=15%  Similarity=0.109  Sum_probs=105.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccc---cch-hcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVR---DLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~---~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      +++||||+|-||..+++.|.+++ .+++++.|+.....+   .+. +.....+++++.+|++|++++.+++..       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            68999999999999999999998 578999998321111   111 111225699999999999999998754       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ++.|||+++...+        +.....+...+.++.+|.++.....++.+|++||+.. ++.      .....|+..-..
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~------~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG------PGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-------TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC------cchHhHHHHHHH
Confidence            5889999996322        1223456667888999999999888999999999876 553      334689998888


Q ss_pred             HHHHHHhh---CCCEEEEeec
Q psy4233         159 GEKEVLRE---FPEATIFRPS  176 (303)
Q Consensus       159 ~e~~~~~~---~~~~~ilrp~  176 (303)
                      .+.+.+..   +.+++.+.-+
T Consensus       156 lda~a~~~~~~g~~~~sI~wg  176 (181)
T PF08659_consen  156 LDALARQRRSRGLPAVSINWG  176 (181)
T ss_dssp             HHHHHHHHHHTTSEEEEEEE-
T ss_pred             HHHHHHHHHhCCCCEEEEEcc
Confidence            88776653   7888777754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1210|consensus

Probab=99.28  E-value=9.7e-11  Score=98.16  Aligned_cols=197  Identities=16%  Similarity=0.119  Sum_probs=134.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      .+|+|||++.-+|..++..+..+|++|+++.|+..+..+..+...   ...++.+..+|+.|.+++...+++       +
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            589999999999999999999999999999998765443333222   223466899999999888877653       6


Q ss_pred             CEEEEccccCcc-----ccc---hhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA-----TKN---FTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~-----~~~---~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |.+|+|||....     .++   +..+++|..++.++++++-..    . ..+|+++||..+--     +....+.|..+
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-----~i~GysaYs~s  188 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-----GIYGYSAYSPS  188 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-----CcccccccccH
Confidence            999999996322     222   368899999999998877432    1 23899998876632     12334678777


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |.....+...       .++.++..-|+.+..|+-.--+..      +.....+...+    .+.+..+++|.+++.=+.
T Consensus       189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t------kP~~t~ii~g~----ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT------KPEETKIIEGG----SSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc------CchheeeecCC----CCCcCHHHHHHHHHhHHh
Confidence            7766554433       367777777877776642100000      11122222222    344899999999998776


Q ss_pred             CC
Q psy4233         229 DP  230 (303)
Q Consensus       229 ~~  230 (303)
                      ..
T Consensus       259 rg  260 (331)
T KOG1210|consen  259 RG  260 (331)
T ss_pred             hc
Confidence            53

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.18  E-value=3e-10  Score=120.50  Aligned_cols=160  Identities=14%  Similarity=0.057  Sum_probs=118.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCccc----------c----------------------------
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDV----------R----------------------------   57 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~----------~----------------------------   57 (303)
                      ++++++||||++.||..++++|.++ |.+|+++.|+.....          .                            
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3679999999999999999999998 599999999731000          0                            


Q ss_pred             ---------cchh-cCCCCceEEEecCCCCHHHHHHHhc------ccCEEEEccccCcc--------ccchhhhhhhcch
Q psy4233          58 ---------DLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------YSNVVINLIGREFA--------TKNFTIADANVEI  113 (303)
Q Consensus        58 ---------~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~  113 (303)
                               .+.. .....+++++.+|++|.+++.+++.      ++|.|||+||....        +.....+++|+.+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                     0000 0111357899999999998887664      37999999996322        2345689999999


Q ss_pred             HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-----CCCEEEEeecceeeC
Q psy4233         114 PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-----FPEATIFRPSDMYGS  181 (303)
Q Consensus       114 ~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-----~~~~~ilrp~~~~G~  181 (303)
                      +.++++++.....++||++||...+...     .....|+.+|.....+.+..     +.++..+.||..-++
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~-----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGN-----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCC-----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            9999999988777799999998764321     23468999998887766553     467788888876554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.7e-10  Score=91.78  Aligned_cols=155  Identities=14%  Similarity=0.144  Sum_probs=104.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~v   91 (303)
                      |+++|||||||+|. +++.|.++|++|++++|++..............++..+.+|++|.+++.+++++       +|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            58999999998876 999999999999999987543222111111234688899999999998887754       4566


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCc----eEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhC
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVE----KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREF  167 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~  167 (303)
                      |+.+              ...++.++.++|++.+++    +++++=+..+..           +    +...+. +....
T Consensus        80 v~~v--------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~-----------~----~~~~~~-~~~~~  129 (177)
T PRK08309         80 VAWI--------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASD-----------P----RIPSEK-IGPAR  129 (177)
T ss_pred             EEec--------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCc-----------h----hhhhhh-hhhcC
Confidence            6544              344667899999999998    899887555421           1    111122 22234


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      ..|--+..|.+.-.                         ...  -|++-+.+++.++.+++.+.
T Consensus       130 ~~~~~i~lgf~~~~-------------------------~~~--rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        130 CSYRRVILGFVLED-------------------------TYS--RWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             CceEEEEEeEEEeC-------------------------Ccc--ccCchHHHHHHHHHHHhcCC
Confidence            56666666655411                         112  26777889999999987644

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.12  E-value=5.2e-10  Score=97.04  Aligned_cols=162  Identities=12%  Similarity=-0.008  Sum_probs=109.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+|+||+|+||+|.||+.++..|..++  .++.++++.. .......+.-...  .....+.+|+.++.+.++++|+||+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~-~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaDvVVi   82 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG-APGVAADLSHIDT--PAKVTGYADGELWEKALRGADLVLI   82 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC-CcccccchhhcCc--CceEEEecCCCchHHHhCCCCEEEE
Confidence            346799999999999999999998665  6899998832 1111111110011  2234455666666788999999999


Q ss_pred             ccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHHH--
Q psy4233          94 LIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN--------PPTYYISGGSQFYRTKYQGEK--  161 (303)
Q Consensus        94 ~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e~--  161 (303)
                      ++|....  ..+.+.+..|...++++++++++++++++|+++|..+..-        .....+.+...|+..-+..-+  
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9997433  4567889999999999999999999999999999777322        122333444566664222222  


Q ss_pred             --HHHhhCCCEEEEeecceeeC
Q psy4233         162 --EVLREFPEATIFRPSDMYGS  181 (303)
Q Consensus       162 --~~~~~~~~~~ilrp~~~~G~  181 (303)
                        +.+..++....++ +.++|.
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGe  183 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGG  183 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEee
Confidence              2222467777777 788884

>PLN00106 malate dehydrogenase

Probab=99.06  E-value=1.7e-09  Score=93.95  Aligned_cols=160  Identities=15%  Similarity=0.058  Sum_probs=110.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +.||+|+||+|.||+.++..|..++  .++.+++..+ .......+.--..  .....++.+.+++.+.++++|+|||+|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVitA   94 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHINT--PAQVRGFLGDDQLGDALKGADLVIIPA   94 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhCCc--CceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence            4599999999999999999999776  5899998865 2111111110001  112234444556778899999999999


Q ss_pred             ccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHHHHHH-
Q psy4233          96 GREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN--------PPTYYISGGSQFYRTKYQGEKEVL-  164 (303)
Q Consensus        96 ~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e~~~~-  164 (303)
                      |....  ..+.+....|...++++++.+++++.+.+|+++|--+.+.        .....+.+...|+..+...+++-. 
T Consensus        95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~  174 (323)
T PLN00106         95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTF  174 (323)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHH
Confidence            97432  4567889999999999999999999999999998766521        122334555677777766655332 


Q ss_pred             ---hhCCCEEEEeecceeeC
Q psy4233         165 ---REFPEATIFRPSDMYGS  181 (303)
Q Consensus       165 ---~~~~~~~ilrp~~~~G~  181 (303)
                         ..+++...+. +.++|.
T Consensus       175 lA~~lgv~~~~V~-~~ViGe  193 (323)
T PLN00106        175 VAEKKGLDPADVD-VPVVGG  193 (323)
T ss_pred             HHHHhCCChhheE-EEEEEe
Confidence               2467666665 556663

>PRK06720 hypothetical protein; Provisional

Probab=99.06  E-value=3.4e-09  Score=83.84  Aligned_cols=84  Identities=20%  Similarity=0.241  Sum_probs=63.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------   85 (303)
                      +.+++++++||||+|.||..+++.|.++|++|+++.|+........... ....+..++.+|++|.+++.+++       
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4456789999999999999999999999999999998754321111111 11234678899999998887754       


Q ss_pred             cccCEEEEcccc
Q psy4233          86 KYSNVVINLIGR   97 (303)
Q Consensus        86 ~~~D~vi~~a~~   97 (303)
                      .++|++||+||.
T Consensus        92 G~iDilVnnAG~  103 (169)
T PRK06720         92 SRIDMLFQNAGL  103 (169)
T ss_pred             CCCCEEEECCCc
Confidence            348999999986

>KOG1199|consensus

Probab=99.04  E-value=7.7e-10  Score=84.62  Aligned_cols=209  Identities=16%  Similarity=0.149  Sum_probs=144.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      ..+...+|||+...+|...++.|..+|..|.+++-..++..+..+..+  .++.+...|+++..++..++..       .
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            456678999999999999999999999999999886655555544444  5689999999999998887643       6


Q ss_pred             CEEEEccccCc--------------cccchhhhhhhcchHHHHHHHHHh--------cCCc--eEEEEecCccCCCCCCC
Q psy4233          89 NVVINLIGREF--------------ATKNFTIADANVEIPARLARLSKE--------MGVE--KFIHISALNADPNPPTY  144 (303)
Q Consensus        89 D~vi~~a~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~--------~~~~--~~v~~Ss~~~~~~~~~~  144 (303)
                      |+.++|||...              .+.-+...++|+.++.|+++....        .+-+  -+|.+.|..+|..+-  
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~--  162 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT--  162 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc--
Confidence            99999999511              123356788999999998886532        1112  455555666665432  


Q ss_pred             CCCCCCchhHHHHHHHH----HHHhh---CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeH
Q psy4233         145 YISGGSQFYRTKYQGEK----EVLRE---FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~----~~~~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~  216 (303)
                         ....|+.+|...--    +.++.   |+++..+-||.+-.|-...   ++...+. ....+|++       .-+-|.
T Consensus       163 ---gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss---lpekv~~fla~~ipfp-------srlg~p  229 (260)
T KOG1199|consen  163 ---GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS---LPEKVKSFLAQLIPFP-------SRLGHP  229 (260)
T ss_pred             ---chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh---hhHHHHHHHHHhCCCc-------hhcCCh
Confidence               34678888876443    23333   7889999998876563321   1111111 22344543       224677


Q ss_pred             HHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         217 GDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                      .+.+..+...++++...|++..+.+
T Consensus       230 ~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  230 HEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHHHHHhCcccCCeEEEecc
Confidence            8888888889999888888887754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.99  E-value=1.8e-09  Score=95.01  Aligned_cols=98  Identities=24%  Similarity=0.264  Sum_probs=78.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ||+|+|.|| |+||+.++..|+++| ++|++.+|+..+..+-....  .++++.+++|..|.+.+.+++++.|+||+++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            689999998 999999999999999 99999999865543332221  13799999999999999999999999999998


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      ....              ..++++|-+.|+ ++|=+|
T Consensus        78 ~~~~--------------~~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          78 PFVD--------------LTILKACIKTGV-DYVDTS   99 (389)
T ss_pred             chhh--------------HHHHHHHHHhCC-CEEEcc
Confidence            6421              167888888887 555444

>KOG1014|consensus

Probab=98.95  E-value=8.5e-09  Score=86.72  Aligned_cols=160  Identities=14%  Similarity=0.022  Sum_probs=110.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHH----HHHHhcc--cCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDE----IRKAIKY--SNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~----~~~~~~~--~D~   90 (303)
                      .=..|||||..||.+.+++|.++|.+|++++|+.++.....+...  ..-++..+..|+++.+.    +.+.+.+  +-+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            458999999999999999999999999999998654433222221  12347888999987664    4555555  568


Q ss_pred             EEEccccCccc----------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          91 VINLIGREFAT----------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        91 vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|||+|...+.          .-+....+|..++..+.+..    .+.+-.-||++||......     ..-...|+.+|
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p-----~p~~s~ysasK  204 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP-----TPLLSVYSASK  204 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc-----ChhHHHHHHHH
Confidence            99999975421          22356677777765555544    2333347999998877642     23346799999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCC
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGD  183 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~  183 (303)
                      ...+..-+.       .|+.+-.+-|..|-++..
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence            977765433       367788888888876543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.95  E-value=6.6e-09  Score=90.79  Aligned_cols=162  Identities=12%  Similarity=0.030  Sum_probs=101.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcc-cccchhcCCCCceE-EEecCCCCHHHHHHHhccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYD-VRDLRLCGDLGQVL-FQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~-~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~   88 (303)
                      +.||+||||+|+||++++..|+..+       .++++++++.... .+....  +..... ....|+.+..++.+.++++
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--Dl~d~~~~~~~~~~~~~~~~~~l~~a   79 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--ELQDCAFPLLKSVVATTDPEEAFKDV   79 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--ehhhccccccCCceecCCHHHHhCCC
Confidence            5689999999999999999999854       4899999964321 111110  001110 1223544456677888999


Q ss_pred             CEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEecCcc------CCCCCCCCCC--CCCchhHHH
Q psy4233          89 NVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMG-VE-KFIHISALNA------DPNPPTYYIS--GGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss~~~------~~~~~~~~~~--~~~~y~~~K  156 (303)
                      |+|||+||....  ..+.+.++.|+...+.+++.+.++. .. .++.+|...-      .......|..  ....+-.+.
T Consensus        80 DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~  159 (325)
T cd01336          80 DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHN  159 (325)
T ss_pred             CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHH
Confidence            999999997533  3457899999999999999888873 33 4555553110      0000011100  112244455


Q ss_pred             HHHHHHHHhhCCCEEEEeecceeeC
Q psy4233         157 YQGEKEVLREFPEATIFRPSDMYGS  181 (303)
Q Consensus       157 ~~~e~~~~~~~~~~~ilrp~~~~G~  181 (303)
                      +....+.+..+++...++-..++|.
T Consensus       160 R~r~~la~~l~v~~~~v~~~~V~Ge  184 (325)
T cd01336         160 RAKSQIALKLGVPVSDVKNVIIWGN  184 (325)
T ss_pred             HHHHHHHHHhCcChhhceEeEEEEc
Confidence            5555565666777777776667774

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.76  E-value=3.2e-08  Score=81.93  Aligned_cols=81  Identities=14%  Similarity=0.073  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH
Q psy4233          17 NGVVATVFGAS----------------GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        17 ~~~~vlVtGat----------------G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   80 (303)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++..........   ...+...+.++....+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~~   78 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQDK   78 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHHH
Confidence            57899999875                999999999999999999998764321111110   01224456664444467


Q ss_pred             HHHHhc--ccCEEEEccccCcc
Q psy4233          81 IRKAIK--YSNVVINLIGREFA  100 (303)
Q Consensus        81 ~~~~~~--~~D~vi~~a~~~~~  100 (303)
                      +.+++.  ++|+|||+|+..+.
T Consensus        79 l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         79 MKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHhcccCCCEEEECccccce
Confidence            777785  58999999997443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.74  E-value=6e-08  Score=80.60  Aligned_cols=78  Identities=9%  Similarity=0.117  Sum_probs=53.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi~   93 (303)
                      +.+-+++=-.+|||+|.+|+++|+++|++|+++.|.......      ...+++++.++..+  .+.+.+.++++|+|||
T Consensus        14 iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh   87 (229)
T PRK06732         14 IDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIH   87 (229)
T ss_pred             cCCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEe
Confidence            344333333679999999999999999999999875321110      01346666654322  2456667778999999


Q ss_pred             ccccCc
Q psy4233          94 LIGREF   99 (303)
Q Consensus        94 ~a~~~~   99 (303)
                      +|+..+
T Consensus        88 ~AAvsd   93 (229)
T PRK06732         88 SMAVSD   93 (229)
T ss_pred             CCccCC
Confidence            999854

>PRK05086 malate dehydrogenase; Provisional

Probab=98.72  E-value=1.3e-07  Score=82.34  Aligned_cols=114  Identities=17%  Similarity=0.117  Sum_probs=79.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-C--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGK-Q--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~-~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |||+|+||||.+|++++..|.. .  ++++++++|++........+. +.+....+.+  .+.+++.+.++++|+||.++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~-~~~~~~~i~~--~~~~d~~~~l~~~DiVIita   77 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLS-HIPTAVKIKG--FSGEDPTPALEGADVVLISA   77 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhh-cCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence            6999999999999999988854 2  367888888643211111111 1011122333  22344556778999999999


Q ss_pred             ccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          96 GREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        96 ~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      |....  ..+.+....|....+.+++++++++.+++|.+.|-
T Consensus        78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            97432  34567889999999999999999998888888764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.71  E-value=1.1e-06  Score=70.82  Aligned_cols=217  Identities=13%  Similarity=0.140  Sum_probs=126.2

Q ss_pred             cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+++|++||+|-.  .-|+..|+++|.++|.++......+ ...+..+ +........+++||+++.++++++|.     
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            3678999999964  5699999999999999877765543 2222222 11122235679999999988888775     


Q ss_pred             --ccCEEEEccccCccc---------cc---hhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFAT---------KN---FTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 --~~D~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                        +.|.++|+.+....+         ..   ...+++..-....+.++++..  +-..+|-+|=.+.   ..-.  .-.+
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs---~r~v--PnYN  156 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS---ERVV--PNYN  156 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc---eeec--CCCc
Confidence              379999999853211         11   123333333334444444431  1124443332111   1111  1236


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      ..+.+|+..|.-++..       |+++..+-.|-+-.-....+..+..+++......|+        +..++.+||+..-
T Consensus       157 vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl--------~r~vt~eeVG~tA  228 (259)
T COG0623         157 VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL--------RRNVTIEEVGNTA  228 (259)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc--------cCCCCHHHhhhhH
Confidence            7899999999887764       334433333222111112233344444433333443        3457899999999


Q ss_pred             HHHhcC--CCCCCcEEEEeCCccc
Q psy4233         224 VAACKD--PDAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~--~~~~g~~~~i~~~~~~  245 (303)
                      ++++..  ....|++.++.+|-.+
T Consensus       229 ~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         229 AFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HHHhcchhcccccceEEEcCCcee
Confidence            999874  3347888888877553

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.67  E-value=8.7e-08  Score=86.36  Aligned_cols=94  Identities=23%  Similarity=0.288  Sum_probs=68.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-C-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQG-S-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g-~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+|.|| |++|+.+++.|.+++ + +|++.+|+........... ...+++.+++|+.|.+++.++++++|+||||++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            799999 999999999999987 4 8999999855432222111 33679999999999999999999999999999874


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      .              ...++++|.++|+ ++|-
T Consensus        79 ~--------------~~~v~~~~i~~g~-~yvD   96 (386)
T PF03435_consen   79 F--------------GEPVARACIEAGV-HYVD   96 (386)
T ss_dssp             G--------------HHHHHHHHHHHT--EEEE
T ss_pred             h--------------hHHHHHHHHHhCC-Ceec
Confidence            1              1257777777776 6664

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1204|consensus

Probab=98.63  E-value=7.8e-08  Score=77.23  Aligned_cols=198  Identities=12%  Similarity=0.027  Sum_probs=120.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEE--EeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQII--IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~--~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      .+.+||||++..||..++..+.+++-++.  +..|.... .+.++.... .......+|+.....+.+.++       +-
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            34699999999999999999999886543  33333222 222111100 112333444444433333322       26


Q ss_pred             CEEEEccccCc-----------cccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          89 NVVINLIGREF-----------ATKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        89 D~vi~~a~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      |.|||+||...           ...++.+++.|+.....|...+..    .+ .+-+|++||...-.     |......|
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----p~~~wa~y  158 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----PFSSWAAY  158 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----cccHHHHh
Confidence            99999999622           134567999999998888876643    22 25789999987754     44667789


Q ss_pred             hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +-+|++.+.++...      ++.+..++||.+=.+.+....    .-+..... .+..      ... -..+...+.|+.
T Consensus       159 c~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~-f~el------~~~-~~ll~~~~~a~~  230 (253)
T KOG1204|consen  159 CSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKM-FKEL------KES-GQLLDPQVTAKV  230 (253)
T ss_pred             hhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHH-HHHH------Hhc-CCcCChhhHHHH
Confidence            99999999888764      467777888877544221110    11111110 0000      111 246788889999


Q ss_pred             HHHHhcCC
Q psy4233         223 IVAACKDP  230 (303)
Q Consensus       223 ~~~~~~~~  230 (303)
                      +..++++.
T Consensus       231 l~~L~e~~  238 (253)
T KOG1204|consen  231 LAKLLEKG  238 (253)
T ss_pred             HHHHHHhc
Confidence            99988864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.63  E-value=2.8e-07  Score=77.48  Aligned_cols=93  Identities=15%  Similarity=0.184  Sum_probs=70.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+|||+||||. |..|++.|.+.|++|++.+++...... +..    .+...+..+..|.+++.+.+.+  +|+||+++.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~~----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YPI----HQALTVHTGALDPQELREFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-ccc----cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence            68999999999 999999999999999999997643222 111    1133455666788888888865  999999987


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCce
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEK  128 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  128 (303)
                      +..           ...+.++.++|++.+++.
T Consensus        75 PfA-----------~~is~~a~~a~~~~~ipy   95 (256)
T TIGR00715        75 PFA-----------AQITTNATAVCKELGIPY   95 (256)
T ss_pred             HHH-----------HHHHHHHHHHHHHhCCcE
Confidence            642           235668999999999853

This enzyme was found to be a monomer by gel filtration.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.61  E-value=1.2e-07  Score=77.02  Aligned_cols=84  Identities=18%  Similarity=0.154  Sum_probs=63.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++.++++|+||+|.+|+.+++.|.+.|++|++++|+...............+.+...+|..+.+++.+.++++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            45678999999999999999999999999999999875322211111111123556677888999999999999999998


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus       105 t~~g  108 (194)
T cd01078         105 GAAG  108 (194)
T ss_pred             CCCC
Confidence            7643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd00704 MDH Malate dehydrogenase

Probab=98.51  E-value=8.6e-07  Score=77.41  Aligned_cols=103  Identities=12%  Similarity=0.035  Sum_probs=74.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-----------HHH
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-----------DEI   81 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----------~~~   81 (303)
                      ||.|+||+|.||+.++..|+..|       +++.+++++...  +         ..+-...|+.|.           ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--~---------~~~g~~~Dl~d~~~~~~~~~~i~~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--K---------ALEGVVMELQDCAFPLLKGVVITTDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--C---------ccceeeeehhhhcccccCCcEEecCh
Confidence            79999999999999999999766       258888886421  1         122223333332           345


Q ss_pred             HHHhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233          82 RKAIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS  133 (303)
Q Consensus        82 ~~~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S  133 (303)
                      .+.++++|+|||+||...  .....+.++.|....+.++..++++. .. .++.+|
T Consensus        71 ~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          71 EEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            678899999999999742  34667899999999999999999883 54 445444

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.47  E-value=1.2e-06  Score=76.41  Aligned_cols=158  Identities=13%  Similarity=0.084  Sum_probs=103.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEeecCCCcc-cccchhcC-C-----CCceEEEecCCCCHHHHHH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-------QIIIPYRGNFYD-VRDLRLCG-D-----LGQVLFQPYHPRNDDEIRK   83 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~-~~~~~~~~-~-----~~~~~~~~~Dl~d~~~~~~   83 (303)
                      ++||.|+||+|.||+.++..|+..|.       ++.+++...... ........ +     ..++++ .      ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~------~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T------DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e------cCcHH
Confidence            57999999999999999999998773       788888853321 11111100 0     011221 1      12245


Q ss_pred             HhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCC-c-eEEEEecCcc---CCCCCCCC-CCCCCchhHH
Q psy4233          84 AIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGV-E-KFIHISALNA---DPNPPTYY-ISGGSQFYRT  155 (303)
Q Consensus        84 ~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~Ss~~~---~~~~~~~~-~~~~~~y~~~  155 (303)
                      .++++|+||.+||...  ...+.+..+.|....+.+....+++.. . .++.+|...-   |--....+ ..+...|+.+
T Consensus        75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t  154 (322)
T cd01338          75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT  154 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence            6789999999999742  345678899999999999999988773 4 4554543110   00001111 2345678888


Q ss_pred             HHHHHHHHHh----hCCCEEEEeecceeeCC
Q psy4233         156 KYQGEKEVLR----EFPEATIFRPSDMYGSG  182 (303)
Q Consensus       156 K~~~e~~~~~----~~~~~~ilrp~~~~G~~  182 (303)
                      ++..+++...    .+++...+|...+||+.
T Consensus       155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            8887776544    37888889988899985

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.47  E-value=1e-05  Score=71.39  Aligned_cols=80  Identities=13%  Similarity=0.039  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChhHHH--HHHHHHhCCCeEEEeecCCCcccc-----------cch-hcCC-CCceEEEecCCCCHHHHH
Q psy4233          18 GVVATVFGASGYMGSY--LCNKLGKQGSQIIIPYRGNFYDVR-----------DLR-LCGD-LGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~-~~~~-~~~~~~~~~Dl~d~~~~~   82 (303)
                      ++++|||||++.+|.+  ++++| +.|.+|+++++.......           .+. .... ...+..+.+|+++++++.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            6799999999999999  89999 999999888753211110           111 1111 123678899999988877


Q ss_pred             HHhc-------ccCEEEEccccC
Q psy4233          83 KAIK-------YSNVVINLIGRE   98 (303)
Q Consensus        83 ~~~~-------~~D~vi~~a~~~   98 (303)
                      ++++       ++|++||+++..
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccC
Confidence            6553       479999999864

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.40  E-value=2.5e-06  Score=74.54  Aligned_cols=103  Identities=14%  Similarity=0.040  Sum_probs=74.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH-----------HH
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD-----------EI   81 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-----------~~   81 (303)
                      +|.|+||+|.||+.++..|...+       ++++++++.+...           +.+-...|+.|..           +.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------~a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------VLEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------ccceeEeehhcccchhcCceeccCCh
Confidence            58999999999999999999755       2688888864321           1222233343332           34


Q ss_pred             HHHhcccCEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233          82 RKAIKYSNVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS  133 (303)
Q Consensus        82 ~~~~~~~D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S  133 (303)
                      .+.++++|+||++||....  ..+.+..+.|+...+.+.+...++. .+ .++.+|
T Consensus        70 ~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        70 AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            5678899999999997533  3467888999999999999999984 54 455544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG1478|consensus

Probab=98.37  E-value=3.6e-06  Score=68.79  Aligned_cols=165  Identities=14%  Similarity=0.049  Sum_probs=109.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-----eEEEeecCCCccccc---chhc-C-CCCceEEEecCCCCHHHHHHH--
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-----QIIIPYRGNFYDVRD---LRLC-G-DLGQVLFQPYHPRNDDEIRKA--   84 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-----~V~~~~R~~~~~~~~---~~~~-~-~~~~~~~~~~Dl~d~~~~~~~--   84 (303)
                      +.+.++|||++..+|-+|+..|++..-     .+.+..|+-++..+.   ++.. . ..-+++++..|+++..++..+  
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            346789999999999999999998752     345556764443222   1111 1 113488999999987665554  


Q ss_pred             -----hcccCEEEEccccCcc-----------------------------------ccchhhhhhhcchHHHHHHHHHhc
Q psy4233          85 -----IKYSNVVINLIGREFA-----------------------------------TKNFTIADANVEIPARLARLSKEM  124 (303)
Q Consensus        85 -----~~~~D~vi~~a~~~~~-----------------------------------~~~~~~~~~n~~~~~~l~~~~~~~  124 (303)
                           +...|+|+-+||.+..                                   +.-...++.|+-|.--+++.....
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                 4457999999985211                                   122467888998887777765432


Q ss_pred             ----CCceEEEEecCccCCCC---CC-CCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233         125 ----GVEKFIHISALNADPNP---PT-YYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       125 ----~~~~~v~~Ss~~~~~~~---~~-~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                          ...++|.+||..+....   ++ +-.....+|.-+|...+-.--+.       |+.-.++.||.....
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence                23499999999886542   11 12245678999999988644332       456667788777654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.29  E-value=4.6e-05  Score=68.18  Aligned_cols=175  Identities=11%  Similarity=0.064  Sum_probs=105.4

Q ss_pred             cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233          15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   78 (303)
                      .+++++|+||||                ||.+|.+++++|..+|++|+++.+......        ...+  ...|+.+.
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------~~~~--~~~~v~~~  251 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------PPGV--KSIKVSTA  251 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------CCCc--EEEEeccH
Confidence            367899999998                478999999999999999999887643211        0122  45677888


Q ss_pred             HHH-HHHh----cccCEEEEccccCccccc----------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233          79 DEI-RKAI----KYSNVVINLIGREFATKN----------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT  143 (303)
Q Consensus        79 ~~~-~~~~----~~~D~vi~~a~~~~~~~~----------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~  143 (303)
                      +++ ..++    .+.|++|++|+..+....          ......++..+..+++..++...+++ .++=.....    
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~-lvgF~aEt~----  326 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQV-IVGFKAETN----  326 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcE-EEEEEcCCC----
Confidence            777 4444    358999999997433211          12234677788888888876543333 222111111    


Q ss_pred             CCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecc--eeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         144 YYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD--MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       144 ~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                            +.   ..-.+.+.+++.+.++++...-.  -+|..             ......+..++... ....+=.++|+
T Consensus       327 ------~~---l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~-------------~n~~~li~~~~~~~-~~~~~K~~iA~  383 (390)
T TIGR00521       327 ------DD---LIKYAKEKLKKKNLDMIVANDVSQRGFGSD-------------ENEVYIFSKHGHKE-LPLMSKLEVAE  383 (390)
T ss_pred             ------cH---HHHHHHHHHHHcCCCEEEEccCCccccCCC-------------CcEEEEEECCCeEE-eCCCCHHHHHH
Confidence                  11   34445566677789988876421  12221             11222223232222 44556778888


Q ss_pred             HHHHHh
Q psy4233         222 AIVAAC  227 (303)
Q Consensus       222 ~~~~~~  227 (303)
                      .++..+
T Consensus       384 ~i~~~~  389 (390)
T TIGR00521       384 RILDEI  389 (390)
T ss_pred             HHHHHh
Confidence            887654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG2733|consensus

Probab=98.29  E-value=2e-06  Score=73.54  Aligned_cols=78  Identities=22%  Similarity=0.382  Sum_probs=62.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEeecCCCcccccchhcC-----CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          20 VATVFGASGYMGSYLCNKLGK----QGSQIIIPYRGNFYDVRDLRLCG-----DLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      -+.|.|||||.|..+++++++    .|...-+..|+..+..+.+...+     +++...++.+|.+|++++.+..+.+-+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999999    56777777887655444433221     223344899999999999999999999


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      |+||+|+
T Consensus        87 ivN~vGP   93 (423)
T KOG2733|consen   87 IVNCVGP   93 (423)
T ss_pred             EEecccc
Confidence            9999997

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.29  E-value=3.1e-06  Score=75.88  Aligned_cols=179  Identities=9%  Similarity=0.036  Sum_probs=103.8

Q ss_pred             cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233          15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   78 (303)
                      .+++++|+||||                +|.+|.+++++|.++|++|+++++...  ...      ..+  +...|+++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~--~~~------~~~--~~~~dv~~~  254 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN--LPT------PAG--VKRIDVESA  254 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc--ccC------CCC--cEEEccCCH
Confidence            467889999999                999999999999999999999988642  111      012  235688888


Q ss_pred             HHHHHHh----cccCEEEEccccCccccc----------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC
Q psy4233          79 DEIRKAI----KYSNVVINLIGREFATKN----------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY  144 (303)
Q Consensus        79 ~~~~~~~----~~~D~vi~~a~~~~~~~~----------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~  144 (303)
                      +++.+.+    .++|++||+||..+....          .......+.-+..++..+++...++-+.++    |.-    
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VG----Faa----  326 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVG----FAA----  326 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEE----Ecc----
Confidence            7777655    358999999997432211          011223445555677777654432202222    110    


Q ss_pred             CCCCCCchhHHHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeee-cCCCceeeCceeHHHHHHHH
Q psy4233         145 YISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVY-KKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~  223 (303)
                         ..+   ...-.+.+-+.+.+.++++...-.   ++.++...        ...+.++ .++........+=.++|+.|
T Consensus       327 ---Et~---~~~~~A~~kl~~k~~D~ivaN~i~---~~~~fg~~--------~n~~~ii~~~~~~~~~~~~~K~~iA~~i  389 (399)
T PRK05579        327 ---ETG---DVLEYARAKLKRKGLDLIVANDVS---AGGGFGSD--------DNEVTLIWSDGGEVKLPLMSKLELARRL  389 (399)
T ss_pred             ---CCc---hHHHHHHHHHHHcCCeEEEEecCC---cCCCcCCC--------ceEEEEEECCCcEEEcCCCCHHHHHHHH
Confidence               001   112334455566688888776521   11111111        1223333 23332224556778888888


Q ss_pred             HHHhc
Q psy4233         224 VAACK  228 (303)
Q Consensus       224 ~~~~~  228 (303)
                      +..+.
T Consensus       390 ~~~i~  394 (399)
T PRK05579        390 LDEIA  394 (399)
T ss_pred             HHHHH
Confidence            87664

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.27  E-value=4.1e-07  Score=69.72  Aligned_cols=107  Identities=20%  Similarity=0.240  Sum_probs=74.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhc------CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLC------GDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      |||.|+||+|.+|++++..|+..+  .++.++++..... +.....      .......+..   .+.+    .++++|+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~-~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~aDi   72 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKA-EGEALDLSHASAPLPSPVRITS---GDYE----ALKDADI   72 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHH-HHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTTESE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccc-eeeehhhhhhhhhccccccccc---cccc----ccccccE
Confidence            699999999999999999999987  6899998874321 111100      0001122222   2333    4678999


Q ss_pred             EEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          91 VINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        91 vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ||.++|..  ......+.++.|....+.+++...+.+.+ .++.+|
T Consensus        73 vvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   73 VVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99999974  23556788899999999999999998754 444444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.22  E-value=2.9e-06  Score=74.05  Aligned_cols=73  Identities=18%  Similarity=0.327  Sum_probs=52.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhC-C-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQ-G-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .+++++|+||||+|+||+.++++|+++ | .+++++.|+.. ....+..       ++..+++   .++.+.+.++|+||
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~-rl~~La~-------el~~~~i---~~l~~~l~~aDiVv  220 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE-RLQELQA-------ELGGGKI---LSLEEALPEADIVV  220 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH-HHHHHHH-------HhccccH---HhHHHHHccCCEEE
Confidence            466889999999999999999999865 5 68888888643 2222211       1112333   34668889999999


Q ss_pred             EccccC
Q psy4233          93 NLIGRE   98 (303)
Q Consensus        93 ~~a~~~   98 (303)
                      |+++..
T Consensus       221 ~~ts~~  226 (340)
T PRK14982        221 WVASMP  226 (340)
T ss_pred             ECCcCC
Confidence            999874

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.22  E-value=5.5e-06  Score=73.88  Aligned_cols=104  Identities=13%  Similarity=0.057  Sum_probs=67.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~   93 (303)
                      .++|||+|.||||++|+.+++.|.++ ++++..++++.... +.+..    ....+...|+.+.++++. .++++|+||.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~----~~~~l~~~~~~~~~~~~~~~~~~~DvVf~  110 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGS----VFPHLITQDLPNLVAVKDADFSDVDAVFC  110 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchh----hCccccCccccceecCCHHHhcCCCEEEE
Confidence            35779999999999999999999998 57999988853321 11110    011122234433333332 2578999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN  140 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  140 (303)
                      +.+..              .+..++..++ .+ .++|-+|+..-+.+
T Consensus       111 Alp~~--------------~s~~i~~~~~-~g-~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPHG--------------TTQEIIKALP-KD-LKIVDLSADFRLRD  141 (381)
T ss_pred             cCCHH--------------HHHHHHHHHh-CC-CEEEEcCchhccCC
Confidence            87642              3446677663 45 48999998876554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.14  E-value=2.2e-05  Score=58.48  Aligned_cols=98  Identities=17%  Similarity=0.174  Sum_probs=56.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||.|+||||++|+.+++.|.++. .++..+..+..+....+. ........+-+...-.+.+.    +.++|+||.|.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence            79999999999999999999965 565555444342222211 11111112112211134443    3789999999764


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      .              ..+.+...+.+.|+ ++|=.|+..
T Consensus        77 ~--------------~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   77 G--------------ASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             H--------------HHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             h--------------HHHHHHHHHhhCCc-EEEeCCHHH
Confidence            2              12356666677777 666444433

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.13  E-value=1.1e-05  Score=70.15  Aligned_cols=115  Identities=21%  Similarity=0.226  Sum_probs=72.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCC-cccccchhc-CCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNF-YDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~-~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |||.|+||||++|+.++..|+..|+  +|++++|... +........ .+.--.......+....+. +.++++|+||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            6999999999999999999999985  5999999431 111111100 0000000000011111112 348899999999


Q ss_pred             cccCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          95 IGREFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        95 a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      +|....  ..+.+..+.|....+.+++.+.+...+ ++|.+++
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            996432  344678888999999999988887644 5666664

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.07  E-value=7.1e-05  Score=64.90  Aligned_cols=114  Identities=21%  Similarity=0.120  Sum_probs=77.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.|+||+|.||++++-.|+..+  .++.+++.+ ........+.-......+....  ..+++.+.++++|+||.+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCC
Confidence            599999999999999999999888  578888876 2111111111100111111110  11235567899999999999


Q ss_pred             cC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecC
Q psy4233          97 RE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHISAL  135 (303)
Q Consensus        97 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~  135 (303)
                      ..  ....+.+..+.|....+.+++..++++.+ .++.+|..
T Consensus        78 ~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP  119 (310)
T cd01337          78 VPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP  119 (310)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            74  23466789999999999999999988755 55555543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.07  E-value=1.8e-05  Score=69.47  Aligned_cols=96  Identities=15%  Similarity=0.197  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +|++|+|+||||++|+.+++.|.+++|.   +..+ ++..+.-+.+..    .+   ...++.+.+..  .++++|+||.
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v-~s~~~aG~~l~~----~~---~~l~~~~~~~~--~~~~vD~vFl   72 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLL-ASSESAGHSVPF----AG---KNLRVREVDSF--DFSQVQLAFF   72 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEE-ECcccCCCeecc----CC---cceEEeeCChH--HhcCCCEEEE
Confidence            3579999999999999999999987654   3344 333332222221    11   12333332222  1478999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      +++..              ....++..+.++|+ ++|=.|+..-
T Consensus        73 a~p~~--------------~s~~~v~~~~~~G~-~VIDlS~~fR  101 (336)
T PRK05671         73 AAGAA--------------VSRSFAEKARAAGC-SVIDLSGALP  101 (336)
T ss_pred             cCCHH--------------HHHHHHHHHHHCCC-eEEECchhhc
Confidence            87631              12247777777776 6776666554

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.05  E-value=3.4e-05  Score=68.01  Aligned_cols=94  Identities=15%  Similarity=0.140  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |++|+|.||||++|+++++.|.+++|   ++.++++.... .+.+..    .+.+....|+.+.     .++++|+||.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~~----~g~~i~v~d~~~~-----~~~~vDvVf~A   70 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELSF----KGKELKVEDLTTF-----DFSGVDIALFS   70 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeeee----CCceeEEeeCCHH-----HHcCCCEEEEC
Confidence            57999999999999999999999876   45777775332 222221    1234444455432     23689999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ++..              .++.++..+.++|+ ++|=.|+..
T Consensus        71 ~g~g--------------~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         71 AGGS--------------VSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             CChH--------------HHHHHHHHHHhCCC-EEEECCchh
Confidence            8642              12245555555676 566556543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.04  E-value=2.4e-05  Score=64.93  Aligned_cols=97  Identities=22%  Similarity=0.260  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~   97 (303)
                      |+++|.|+ |.+|+.+++.|.++|++|+++.+.+....+....   ....+.+.+|-+|++.+.++ +.++|+++-+.+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---ELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            68999996 9999999999999999999999976543332221   12488999999999999998 7779999988765


Q ss_pred             CccccchhhhhhhcchHHHHHHHHH-hcCCceEEEE
Q psy4233          98 EFATKNFTIADANVEIPARLARLSK-EMGVEKFIHI  132 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~v~~  132 (303)
                      ...         |.    -++..++ ..|+++++--
T Consensus        77 d~~---------N~----i~~~la~~~~gv~~viar   99 (225)
T COG0569          77 DEV---------NS----VLALLALKEFGVPRVIAR   99 (225)
T ss_pred             CHH---------HH----HHHHHHHHhcCCCcEEEE
Confidence            311         21    2444444 4687766633

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.03  E-value=4.2e-05  Score=66.81  Aligned_cols=116  Identities=10%  Similarity=0.027  Sum_probs=75.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC--C-----eEEEeecCCCc-ccccchhcCCCCceE-EEecCCCCHHHHHHHhcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG--S-----QIIIPYRGNFY-DVRDLRLCGDLGQVL-FQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~-----~V~~~~R~~~~-~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~   87 (303)
                      ++.||.|+||+|+||++++..|+..+  .     ++.+++..... ........  +.+.. ....+..-.....+.+++
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~D--l~~~~~~~~~~~~i~~~~~~~~~d   79 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAME--LEDCAFPLLAGVVATTDPEEAFKD   79 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHH--HhhccccccCCcEEecChHHHhCC
Confidence            35799999999999999999999887  3     78888885421 11111110  00110 000011011123456789


Q ss_pred             cCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEec
Q psy4233          88 SNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGV-EKFIHISA  134 (303)
Q Consensus        88 ~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss  134 (303)
                      +|+||.+||..  ....+.+....|....+.+++.++++.. +-++.+-|
T Consensus        80 aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        80 VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999999974  2346678999999999999999998875 54444443

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.96  E-value=2.3e-05  Score=67.65  Aligned_cols=81  Identities=16%  Similarity=0.205  Sum_probs=59.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCC--cccccch-hc-CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNF--YDVRDLR-LC-GDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~--~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      +++++++|+|| |.+|++++.+|.+.|.+ |+++.|+..  +..+.+. .. ...+++.....|+.+.+++...+..+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            45789999998 89999999999999975 999999752  2222211 11 1113355667888888888888888999


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      |||+...
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9999865

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.94  E-value=0.00012  Score=63.54  Aligned_cols=112  Identities=18%  Similarity=0.131  Sum_probs=75.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||.|+||+|.||++++-.|+.++  .++.++++.+ .......+.-......+....  +.+++.+.++++|+||.++|.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCC
Confidence            68999999999999999999887  4788888865 221111111111111111101  112355678999999999997


Q ss_pred             C--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          98 E--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        98 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      .  ....+.+....|....+.+++...+++.+ .++.+|.
T Consensus        78 ~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        78 PRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            3  23456688899999999999999888755 4555553

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.92  E-value=0.00011  Score=64.36  Aligned_cols=110  Identities=18%  Similarity=0.170  Sum_probs=73.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC--C-----eEEEeecCCCc-ccccch--hcC----CCCceEEEecCCCCHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG--S-----QIIIPYRGNFY-DVRDLR--LCG----DLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~-----~V~~~~R~~~~-~~~~~~--~~~----~~~~~~~~~~Dl~d~~~~~   82 (303)
                      +++||.|+||+|.+|+.++-.|+..+  .     ++.+++..+.. ......  +.-    ...++.+ .      ....
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~------~~~y   75 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-T------DDPN   75 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-e------cChH
Confidence            46799999999999999999998876  3     78888875432 111111  100    0011111 1      1224


Q ss_pred             HHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233          83 KAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS  133 (303)
Q Consensus        83 ~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S  133 (303)
                      +.++++|+||-+||..  ....+.+....|....+.+.+...++. .+ .++.+|
T Consensus        76 ~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         76 VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            5678999999999963  234667889999999999999999844 33 555555

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.92  E-value=3.2e-05  Score=65.81  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=55.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ..++|.|||||.|..++++|.++|.+-.+..|+..+ ...+....   +.+.-...+.+++.+.+...+.++|+||+|+.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k-l~~l~~~L---G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK-LDALRASL---GPEAAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH-HHHHHHhc---CccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            369999999999999999999999887666776433 33222111   12222333445899999999999999999973

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.92  E-value=7e-05  Score=66.22  Aligned_cols=101  Identities=22%  Similarity=0.120  Sum_probs=61.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEE-ecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQ-PYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |++|+|+||||++|+.+++.|.++ ++++.++.++.. ..+.+...  .+++..+ ..++.+.+..  .++++|+|+.|.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~--~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~al   76 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDV--HPHLRGLVDLVLEPLDPE--ILAGADVVFLAL   76 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHh--CcccccccCceeecCCHH--HhcCCCEEEECC
Confidence            579999999999999999999987 478877766422 11111110  0111111 1223333332  456799999987


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      +..              ....++..+.++|+ ++|=.|+..-+
T Consensus        77 P~~--------------~~~~~v~~a~~aG~-~VID~S~~fR~  104 (343)
T PRK00436         77 PHG--------------VSMDLAPQLLEAGV-KVIDLSADFRL  104 (343)
T ss_pred             CcH--------------HHHHHHHHHHhCCC-EEEECCcccCC
Confidence            542              12256666666675 78877766554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.92  E-value=5.8e-05  Score=60.40  Aligned_cols=128  Identities=8%  Similarity=0.072  Sum_probs=66.0

Q ss_pred             cCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHhcccCEEEEccccCcccc
Q psy4233          25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIKYSNVVINLIGREFATK  102 (303)
Q Consensus        25 GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi~~a~~~~~~~  102 (303)
                      -+||..|.+|++++..+|++|+.+.....-  +.      ..+++.+...-.+  .+.+.+.+++.|++||+|+..+...
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~--~~------p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSSL--PP------PPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCccc--cc------cccceEEEecchhhhhhhhccccCcceeEEEecchhheee
Confidence            468999999999999999999999886321  11      1357777764221  2334455567899999999754321


Q ss_pred             c-----------hhhhhhhcchHHHHHHHHH-hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCE
Q psy4233         103 N-----------FTIADANVEIPARLARLSK-EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA  170 (303)
Q Consensus       103 ~-----------~~~~~~n~~~~~~l~~~~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~  170 (303)
                      .           .....+.+..+..++.... ....+.+ .++=  ...         .+   .....+.+.++..+.++
T Consensus        98 ~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l~~~~~~~~~-lVGF--kaE---------t~---~l~~~A~~kl~~k~~D~  162 (185)
T PF04127_consen   98 EEPAEGKIKKSSGDELTLELKPTPKILAELRKNKKPNQF-LVGF--KAE---------TE---ELIENAKEKLERKGADL  162 (185)
T ss_dssp             SCHHSS-G---TT-CEEEEEEE-GGHGCCHHHHCSTTTE-EEEE--EEE---------SC---HHHHHHHHHHHHCT-SE
T ss_pred             hhccccccccccCcceEEEEEeChHHHHHHHhcccCCcE-EEEE--Eec---------CC---cHHHHHHHHhHhhCCCE
Confidence            1           1223334444555565553 3222222 1120  011         11   33334455556678998


Q ss_pred             EEEee
Q psy4233         171 TIFRP  175 (303)
Q Consensus       171 ~ilrp  175 (303)
                      ++...
T Consensus       163 IVaN~  167 (185)
T PF04127_consen  163 IVAND  167 (185)
T ss_dssp             EEEEE
T ss_pred             EEEeC
Confidence            88875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.92  E-value=5.5e-05  Score=67.12  Aligned_cols=101  Identities=8%  Similarity=0.113  Sum_probs=58.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchh---cC---CCCc-eEEEecCCCCHHHHHHHhcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRL---CG---DLGQ-VLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~---~~---~~~~-~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      |++++|+|+||||++|+++++.|.++. .++.++.++..+.......   ..   .... ..-+...-.+++.    +.+
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~   76 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDD   76 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcC
Confidence            346899999999999999999999876 4888875554332222110   00   0000 0001111123443    357


Q ss_pred             cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          88 SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        88 ~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +|+|+.+.+..              ....+++.+.+.|+ ++|-.|+.
T Consensus        77 ~DvVf~a~p~~--------------~s~~~~~~~~~~G~-~vIDls~~  109 (349)
T PRK08664         77 VDIVFSALPSD--------------VAGEVEEEFAKAGK-PVFSNASA  109 (349)
T ss_pred             CCEEEEeCChh--------------HHHHHHHHHHHCCC-EEEECCch
Confidence            99998875431              12245677777787 55555544

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.90  E-value=5.5e-05  Score=56.61  Aligned_cols=93  Identities=18%  Similarity=0.263  Sum_probs=55.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEe-ecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGK-QGSQIIIP-YRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~-~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |||.|.|++|.+|+.+++.+.+ .++++.+. +|+++... .......   +..  .....-.+++.+++..+|++|++.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~---~~~--~~~~~v~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELA---GIG--PLGVPVTDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHC---TSS--T-SSBEBS-HHHHTTH-SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhh---CcC--CcccccchhHHHhcccCCEEEEcC
Confidence            6999999999999999999999 56886655 45431111 1110000   000  111112356777888899999986


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      .+              ..+...++.+.++++ ++|.
T Consensus        76 ~p--------------~~~~~~~~~~~~~g~-~~Vi   96 (124)
T PF01113_consen   76 NP--------------DAVYDNLEYALKHGV-PLVI   96 (124)
T ss_dssp             -H--------------HHHHHHHHHHHHHT--EEEE
T ss_pred             Ch--------------HHhHHHHHHHHhCCC-CEEE
Confidence            32              233457788888786 5553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.87  E-value=6.6e-05  Score=69.15  Aligned_cols=77  Identities=16%  Similarity=0.069  Sum_probs=55.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++|+|+|+++ +|..+++.|+++|++|++.++......+.........++.++.+|..+     ....++|+||+++
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            5678999999877 999999999999999999988653322111100011247788888765     3456799999999


Q ss_pred             ccC
Q psy4233          96 GRE   98 (303)
Q Consensus        96 ~~~   98 (303)
                      |..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            864

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.78  E-value=8.5e-05  Score=73.75  Aligned_cols=77  Identities=13%  Similarity=0.112  Sum_probs=58.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-Ce-------------EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQ-------------IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      .+++|+|.|| |++|+.+++.|.+.+ ++             |.+.+++... .+.+.  ...++++.+..|+.|.+++.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~-a~~la--~~~~~~~~v~lDv~D~e~L~  643 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKD-AKETV--EGIENAEAVQLDVSDSESLL  643 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHH-HHHHH--HhcCCCceEEeecCCHHHHH
Confidence            3779999997 999999999998764 33             6666665332 22221  11246788999999999999


Q ss_pred             HHhcccCEEEEcccc
Q psy4233          83 KAIKYSNVVINLIGR   97 (303)
Q Consensus        83 ~~~~~~D~vi~~a~~   97 (303)
                      ++++++|+||++...
T Consensus       644 ~~v~~~DaVIsalP~  658 (1042)
T PLN02819        644 KYVSQVDVVISLLPA  658 (1042)
T ss_pred             HhhcCCCEEEECCCc
Confidence            999999999999875

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.78  E-value=0.0002  Score=60.77  Aligned_cols=69  Identities=16%  Similarity=0.178  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +|+|+|+|++|.+|+.+++.+.+. +.++.++.....+.....           -..++...+++.++++++|+||+++.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCccccCCHHHhccCCCEEEECCC
Confidence            479999999999999999998874 588877655433222211           11123334456666678999998874


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      +
T Consensus        70 p   70 (257)
T PRK00048         70 P   70 (257)
T ss_pred             H
Confidence            3

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.77  E-value=0.00045  Score=60.37  Aligned_cols=108  Identities=17%  Similarity=0.162  Sum_probs=73.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ++||.|+|| |.||+.++-.|+..|.  ++.+++++....... ..+.   ....++.+. .  .+.    +.++++|+|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~----~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY----SDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH----HHhCCCCEE
Confidence            569999998 9999999999999884  799998864432111 1110   000122222 2  122    347899999


Q ss_pred             EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.++|...  .....+....|....+.+++.+++++.+ .++.+|
T Consensus        78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999732  2456688899999999999999887755 444444

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.75  E-value=0.00011  Score=67.78  Aligned_cols=74  Identities=18%  Similarity=0.205  Sum_probs=59.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~   97 (303)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++.. .+.+..   ..+++++.+|.++.+.+.++ ++++|+||-+...
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~-~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~   75 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER-LRRLQD---RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS   75 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH-HHHHHh---hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence            58999997 999999999999999999999986543 222211   12488999999999999988 7889999888653

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.75  E-value=0.00014  Score=64.34  Aligned_cols=102  Identities=20%  Similarity=0.123  Sum_probs=60.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEe-ecCCCcccccchhcCCCCceEEE-ecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIP-YRGNFYDVRDLRLCGDLGQVLFQ-PYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |+|+|+||||++|+.+++.|.++ ++++..+ +++.. ..+.+...  .+.+... ..++.+. +..+.++++|+||.|.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~--~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~al   76 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEV--HPHLRGLVDLNLEPI-DEEEIAEDADVVFLAL   76 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHh--CccccccCCceeecC-CHHHhhcCCCEEEECC
Confidence            58999999999999999999987 4787754 43321 11111100  0111111 1112211 1223335799999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +..              ..+.++..+.++|+ ++|=.|+..-..
T Consensus        77 P~~--------------~s~~~~~~~~~~G~-~VIDlS~~fR~~  105 (346)
T TIGR01850        77 PHG--------------VSAELAPELLAAGV-KVIDLSADFRLK  105 (346)
T ss_pred             Cch--------------HHHHHHHHHHhCCC-EEEeCChhhhcC
Confidence            642              23356777766774 888888766543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.75  E-value=0.00019  Score=61.83  Aligned_cols=109  Identities=18%  Similarity=0.223  Sum_probs=74.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCC-----CCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGD-----LGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +||.|+|| |+||+.++-.|+.++  .++.+++... +..+.......     ...-..+.+| .+    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~-~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINE-EKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEccc-ccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEE
Confidence            58999999 999999999998876  4899998872 22222111100     0001112222 12    3456889999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      +-+||..  ....+.+..+.|....+.+.+...+.+.+-++.+-|
T Consensus        74 vitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          74 VITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9999863  334667899999999999999999988765555544

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.74  E-value=0.00013  Score=63.73  Aligned_cols=115  Identities=15%  Similarity=0.070  Sum_probs=70.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ||||.|+|| |.+|+.++..+...|. +|++++++............+..........+....++ +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            579999998 9999999999998875 89999986543211110000000000000111111123 34789999999998


Q ss_pred             cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      ....  ....+....|....+.+++.+.+...+ .+|..|.
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            6432  233355567888888888888877654 4555543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.71  E-value=0.00037  Score=60.73  Aligned_cols=107  Identities=17%  Similarity=0.181  Sum_probs=73.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcC-----CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCG-----DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +||.|+|+ |.+|+.++..|+..|  +++++++|+............     .........   .+.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----HhCCCCEE
Confidence            48999996 999999999999999  689999997543221111000     001122221   2222    35789999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.++|..  ......+..+.|....+.+++.+++++.+ .++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999974  22356678899999999999999998765 444444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.62  E-value=0.0003  Score=62.02  Aligned_cols=90  Identities=12%  Similarity=0.145  Sum_probs=56.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEE---EeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQII---IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~---~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +|+|.||||++|+.+++.|.+++|++.   .+.+... ....+..    .+......|+. .    ..++++|+||.+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~-~g~~~~~----~~~~~~~~~~~-~----~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRS-AGRKVTF----KGKELEVNEAK-I----ESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecccc-CCCeeee----CCeeEEEEeCC-h----HHhcCCCEEEECCC
Confidence            589999999999999999999887654   3335422 2222221    22455555653 2    23478999999987


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ...              ++.++..+.+.|+ ++|=.|+
T Consensus        71 ~~~--------------s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        71 GSV--------------SKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             HHH--------------HHHHHHHHHHCCC-EEEECCH
Confidence            531              2245555555676 5554454

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.61  E-value=0.00061  Score=60.03  Aligned_cols=108  Identities=15%  Similarity=0.174  Sum_probs=71.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc--c----------------------ccchhcCCCCceEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD--V----------------------RDLRLCGDLGQVLF   70 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~--~----------------------~~~~~~~~~~~~~~   70 (303)
                      ++.++|+|+|+ |-+|+++++.|...|. +++++++..-+.  .                      +.+......-+++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            45779999996 7899999999999995 788887754110  0                      00111111123566


Q ss_pred             EecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        71 ~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +..|++ .+.+.++++++|+||.+....             ..-..+-++|.+.++ .+|+.+..+.++
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D~~-------------~~r~~in~~~~~~~i-p~i~~~~~g~~G  154 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATDNF-------------DTRLLINDLSQKYNI-PWIYGGCVGSYG  154 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence            667764 556788889999999997321             111235677888886 678877666544

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.60  E-value=0.0002  Score=54.50  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=54.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.++++++|.|| |..|+.++.+|.+.|.+ |+++.|+..+..+..... ....++++..     +++.+.+.++|+||+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-~~~~~~~~~~-----~~~~~~~~~~DivI~   81 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-GGVNIEAIPL-----EDLEEALQEADIVIN   81 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-TGCSEEEEEG-----GGHCHHHHTESEEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-CccccceeeH-----HHHHHHHhhCCeEEE
Confidence            467899999997 99999999999999965 999999754433222222 1123444433     334467788999999


Q ss_pred             ccccCc
Q psy4233          94 LIGREF   99 (303)
Q Consensus        94 ~a~~~~   99 (303)
                      +.+...
T Consensus        82 aT~~~~   87 (135)
T PF01488_consen   82 ATPSGM   87 (135)
T ss_dssp             -SSTTS
T ss_pred             ecCCCC
Confidence            988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.60  E-value=0.00048  Score=59.54  Aligned_cols=105  Identities=21%  Similarity=0.209  Sum_probs=60.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +|+||.|.||+|+.|..|++.|..+. .++...+.+............++.+..-......|.+.+  ..+++|+||.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal   78 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL   78 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence            37899999999999999999999987 576666554322222111111111111111111233332  445699999886


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      .-.              ..+.++......++ ++|=+|+..-.
T Consensus        79 Phg--------------~s~~~v~~l~~~g~-~VIDLSadfR~  106 (349)
T COG0002          79 PHG--------------VSAELVPELLEAGC-KVIDLSADFRL  106 (349)
T ss_pred             Cch--------------hHHHHHHHHHhCCC-eEEECCccccc
Confidence            431              12245555666666 57777765443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.59  E-value=0.00066  Score=59.87  Aligned_cols=108  Identities=14%  Similarity=0.147  Sum_probs=71.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccc------------------------ccchhcCCCCceEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDV------------------------RDLRLCGDLGQVLF   70 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~------------------------~~~~~~~~~~~~~~   70 (303)
                      +...+|+|+|+ |.+|++++..|...|. +++++++..-+..                        +.++.....-+++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            45679999997 9999999999999995 7888877531100                        00110011123556


Q ss_pred             EecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        71 ~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +..+++ .+.+.++++++|+||.+...             ...-..+-++|.+.++ .+|+.++.+.++
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn-------------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G  154 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDN-------------FETRFIVNDAAQKYGI-PWIYGACVGSYG  154 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCC-------------HHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence            666764 55677788999999998542             2222357778888886 788877666544

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.58  E-value=0.0011  Score=57.70  Aligned_cols=107  Identities=16%  Similarity=0.163  Sum_probs=72.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---C--CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---G--DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ||.|+|+ |.||+.++-.|+.++  .++.+++......... ..+.   .  ....+.+..+   |    .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCCCEE
Confidence            6899998 999999999999888  4788888864322111 1111   0  0112333333   2    3457899999


Q ss_pred             EEccccCc--ccc--chhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          92 INLIGREF--ATK--NFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        92 i~~a~~~~--~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      |-+||...  ...  +.+.+..|....+.+++.+.+++..-++.+-|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99999742  223  47888999999999999999988654444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.58  E-value=0.00025  Score=60.49  Aligned_cols=112  Identities=19%  Similarity=0.119  Sum_probs=71.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |.|+||+|.+|..++..|+..|    .++.+++++............+..... ....+.-.+++.+.++++|+||.+++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEEEECCC
Confidence            5799999999999999999988    789999886533211111000000000 01111212335567899999999998


Q ss_pred             cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ....  .........|....+.+++.+++...+ .++..|
T Consensus        80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            6422  234457778899999999999988754 444443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.56  E-value=0.00014  Score=63.48  Aligned_cols=35  Identities=11%  Similarity=0.177  Sum_probs=31.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +|+|.|+| +|.+|..++..|+++|++|++++|++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            35899999 699999999999999999999999753

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.55  E-value=0.00068  Score=59.85  Aligned_cols=97  Identities=10%  Similarity=0.147  Sum_probs=56.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .++|+|.||||++|+.+++.|.+++|   ++..+... .+..+....    .+.++...++ +.+    .++++|+||.+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~-rsaGk~~~~----~~~~~~v~~~-~~~----~~~~~D~vf~a   76 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA-RSAGKKVTF----EGRDYTVEEL-TED----SFDGVDIALFS   76 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc-CCCCCeeee----cCceeEEEeC-CHH----HHcCCCEEEEC
Confidence            57999999999999999999998776   34433332 111111111    1122222233 222    34689999988


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      ++..              .++.++..+.+.|+ ++|=.|+..-..
T Consensus        77 ~p~~--------------~s~~~~~~~~~~g~-~VIDlS~~fR~~  106 (344)
T PLN02383         77 AGGS--------------ISKKFGPIAVDKGA-VVVDNSSAFRME  106 (344)
T ss_pred             CCcH--------------HHHHHHHHHHhCCC-EEEECCchhhcC
Confidence            8642              12245555555665 677666655433

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.54  E-value=0.0015  Score=54.83  Aligned_cols=94  Identities=13%  Similarity=0.093  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      +|++|+|.|||+ =|..|++.|.+.|++|++.+........       ...+.++.+-+.|.+.+.+.+++  +++||+.
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~-------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA   72 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPA-------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA   72 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCcc-------cCCceEEECCCCCHHHHHHHHHHCCCCEEEEC
Confidence            367999999987 5999999999999988887665433311       13477888888899999999874  9999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceE
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKF  129 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  129 (303)
                      .-+..           ...++++.++|++.+++.+
T Consensus        73 THPfA-----------~~is~~a~~ac~~~~ipyi   96 (248)
T PRK08057         73 THPYA-----------AQISANAAAACRALGIPYL   96 (248)
T ss_pred             CCccH-----------HHHHHHHHHHHHHhCCcEE
Confidence            76542           3346689999999998533

>KOG1494|consensus

Probab=97.53  E-value=0.00083  Score=56.03  Aligned_cols=115  Identities=22%  Similarity=0.138  Sum_probs=73.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +..+-||.|.||.|.|||.|...|..+.  .+..+.+-.+.. -...+.-.    +-......+.-++.++.+++++|+|
T Consensus        25 ~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI----~T~s~V~g~~g~~~L~~al~~advV  100 (345)
T KOG1494|consen   25 SQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI----NTNSSVVGFTGADGLENALKGADVV  100 (345)
T ss_pred             ccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc----CCCCceeccCChhHHHHHhcCCCEE
Confidence            3456799999999999999987776443  122222222111 11111000    0111122344567899999999999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +--||.+  ..-.+.+.+++|....+.|..++.+...+ ++.++|
T Consensus       101 vIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  101 VIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             EecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            9999973  22355679999999999999999887654 455555

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.53  E-value=0.00038  Score=60.52  Aligned_cols=113  Identities=13%  Similarity=0.093  Sum_probs=70.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.|+|+ |++|..++..|+..|+ +|++++......... ..... ..-.+.....+.-..++.+ ++++|+||-++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~-~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYE-ASPVGGFDTKVTGTNNYAD-TANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhh-hhhccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence            58999997 9999999999999886 899998854322111 11110 0000000111111112333 578999999999


Q ss_pred             cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      .+..  ..+.+....|....+.+++.+.+++.. .+|.+|.
T Consensus        79 ~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            6432  344567788999999999988877643 5555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN02602 lactate dehydrogenase

Probab=97.53  E-value=0.00039  Score=61.44  Aligned_cols=108  Identities=13%  Similarity=0.100  Sum_probs=72.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +||.|+|+ |.||+.++-.|+..+  .++.+++.+....... ..+.   .-.+... +.++ .|.    +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy----~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDY----AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCH----HHhCCCCEEE
Confidence            69999996 999999999999887  4788888864322111 1110   0011122 2221 122    2378999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      -+||...  .....+....|....+.+++..++++.+ .++.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999742  2456678889999999999999988755 455444

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.53  E-value=0.00049  Score=60.27  Aligned_cols=111  Identities=15%  Similarity=0.081  Sum_probs=73.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc-CCC---Cce-EEEecCCCCHHHHHHHhcccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC-GDL---GQV-LFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-~~~---~~~-~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ..+||.|+|| |.+|+.++..|...| .++.+++++..... ..... .+.   .+. ..+.+    ..+++ .++++|+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~-g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~ADi   76 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ-GKALDLKHFSTLVGSNINILG----TNNYE-DIKDSDV   76 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch-hHHHHHhhhccccCCCeEEEe----CCCHH-HhCCCCE
Confidence            4579999997 999999999999888 68888888654321 11110 000   000 11111    12334 6689999


Q ss_pred             EEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCce-EEEEec
Q psy4233          91 VINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEK-FIHISA  134 (303)
Q Consensus        91 vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~Ss  134 (303)
                      ||.++|...  .....+....|....+.+++.+.+...+. ++++|.
T Consensus        77 VVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999997632  23455677888888889999998887654 666654

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.51  E-value=0.0012  Score=59.90  Aligned_cols=112  Identities=16%  Similarity=0.079  Sum_probs=75.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-------CC--eEEEeecCCCccccc-chhc----CCCCceEEEecCCCCHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-------GS--QIIIPYRGNFYDVRD-LRLC----GDLGQVLFQPYHPRNDDEI   81 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-------g~--~V~~~~R~~~~~~~~-~~~~----~~~~~~~~~~~Dl~d~~~~   81 (303)
                      .++-||.|+||+|.||.+++-.|+..       +.  +++.++++.+..... ..+.    ....++.+ ..  .|    
T Consensus        98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~----  170 (444)
T PLN00112         98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP----  170 (444)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC----
Confidence            34569999999999999999999988       53  788888865432211 1110    00012211 11  12    


Q ss_pred             HHHhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHh-cCCc-eEEEEec
Q psy4233          82 RKAIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKE-MGVE-KFIHISA  134 (303)
Q Consensus        82 ~~~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~-~~~~-~~v~~Ss  134 (303)
                      .+.++++|+||.++|...  .....+..+.|....+.+.+...+ ++.. ++|.+|.
T Consensus       171 ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        171 YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            345789999999999742  346678999999999999999999 5644 5555553

>PRK04148 hypothetical protein; Provisional

Probab=97.49  E-value=0.00067  Score=50.90  Aligned_cols=92  Identities=14%  Similarity=0.110  Sum_probs=67.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +++|+++|. | -|.+++..|.+.|++|++++.++.. .+..+.    ..++.+.+|+.+++.  +..+++|.|+.+=.+
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a-V~~a~~----~~~~~v~dDlf~p~~--~~y~~a~liysirpp   87 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA-VEKAKK----LGLNAFVDDLFNPNL--EIYKNAKLIYSIRPP   87 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH-HHHHHH----hCCeEEECcCCCCCH--HHHhcCCEEEEeCCC
Confidence            478999995 7 8999999999999999999997652 222221    247899999998874  456789999877543


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      .             +....+++.+++.++.-+|.
T Consensus        88 ~-------------el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         88 R-------------DLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             H-------------HHHHHHHHHHHHcCCCEEEE
Confidence            2             12236899999998854443

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.47  E-value=0.00046  Score=60.40  Aligned_cols=113  Identities=15%  Similarity=0.062  Sum_probs=73.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc-cchhc---C-CCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR-DLRLC---G-DLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~-~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      +..+||.|+|| |.+|+.++..++..|. ++++++.++..... .+...   . ......+. .. .|   + +.++++|
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~-~d---~-~~l~~aD   76 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GT-NN---Y-EDIAGSD   76 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-EC-CC---H-HHhCCCC
Confidence            45679999995 9999999999998884 88888887653211 11100   0 00112222 11 23   2 3568999


Q ss_pred             EEEEccccCcc--c-----cchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecC
Q psy4233          90 VVINLIGREFA--T-----KNFTIADANVEIPARLARLSKEMGVE-KFIHISAL  135 (303)
Q Consensus        90 ~vi~~a~~~~~--~-----~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~  135 (303)
                      +||.+++....  .     ...+....|....+.+++.+.+...+ .++..|..
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            99999986421  1     33456677888888999999888765 56666643

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.42  E-value=0.0027  Score=55.42  Aligned_cols=107  Identities=17%  Similarity=0.189  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchhcC---CCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRLCG---DLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |||.|+|+ |.+|..++..|+.+|  .+|.+++++...... ...+..   -.+...+..   .|.    +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence            58999998 999999999999999  689999987543211 111110   001122221   222    3478999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      .+++...  .....+....|....+.+++.+++.+.+-++.+-
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            9999742  2345567788999999999998887754334333

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.42  E-value=0.00044  Score=60.28  Aligned_cols=109  Identities=16%  Similarity=0.128  Sum_probs=72.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      .+||.|+|+ |.||+.++-.|+..|  .++.+++.+....... ..+.   .-.....+...  .|.+    .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCCCEE
Confidence            359999996 999999999999887  5788888765322111 1110   00011122221  1333    36899999


Q ss_pred             EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.++|...  .....+..+.|....+.+++.+++++.+ .++.+|
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            99999632  2456678899999999999999998755 444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.42  E-value=0.0024  Score=51.92  Aligned_cols=109  Identities=15%  Similarity=0.167  Sum_probs=69.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcc--ccc----------------------chhcCCCCceEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYD--VRD----------------------LRLCGDLGQVLF   70 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~--~~~----------------------~~~~~~~~~~~~   70 (303)
                      .+..+|+|.|+.| +|+++++.|...| .++++++...-+.  ...                      ++.....-+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            3467999999866 9999999999999 5687776542211  110                      000011122444


Q ss_pred             EecCCCC-HHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          71 QPYHPRN-DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        71 ~~~Dl~d-~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +..++.+ .+...+.++++|+||.+...             ......+-+.|++.++ ++|+.++.+.++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d~-------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  151 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEEN-------------YERTAKVNDVCRKHHI-PFISCATYGLIG  151 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            5555532 44556678889999977432             1122346788888887 888888777665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.41  E-value=0.00084  Score=58.17  Aligned_cols=206  Identities=11%  Similarity=0.038  Sum_probs=104.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ++++|.|.||||++|+.+++.|.++. .++..+.++..+                   ++.+   ....++++|+||.+.
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------~~~~---~~~~~~~~DvvFlal   58 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------DAAA---RRELLNAADVAILCL   58 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------cccC---chhhhcCCCEEEECC
Confidence            36799999999999999999999987 466666554321                   1111   123456799999887


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCC-----------CCCCCCCchhHHHHH
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPT-----------YYISGGSQFYRTKYQ  158 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~-----------~~~~~~~~y~~~K~~  158 (303)
                      ...              ....++..+.+.|+ ++|=.|+..-..+      +|-           ....-.+.|..+-..
T Consensus        59 p~~--------------~s~~~~~~~~~~g~-~VIDlSadfRl~~~~~yglPEvn~~~~~~i~~~~~IanPgC~~Ta~~l  123 (313)
T PRK11863         59 PDD--------------AAREAVALIDNPAT-RVIDASTAHRTAPGWVYGFPELAPGQRERIAAAKRVANPGCYPTGAIA  123 (313)
T ss_pred             CHH--------------HHHHHHHHHHhCCC-EEEECChhhhcCCCCeEEcCccCHHHHHHhhcCCeEEcCCcHHHHHHH
Confidence            431              12245555555665 6776666543321      111           000112445554444


Q ss_pred             HHHHHHhhC-C-C---EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc-----
Q psy4233         159 GEKEVLREF-P-E---ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-----  228 (303)
Q Consensus       159 ~e~~~~~~~-~-~---~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~-----  228 (303)
                      +-.=+.+.+ + +   .++--.+.+-|.+......+..........+..|+.+..    .-|...+.+.+-....     
T Consensus       124 aL~PL~~~~li~~~~~i~i~a~SG~SGAG~~~~~~~~~~~~~~~~n~~~Y~~~~~----HrH~pEi~~~l~~~~~~~F~P  199 (313)
T PRK11863        124 LLRPLVDAGLLPADYPVSINAVSGYSGGGKAMIAAYEAAPDGKAPAFRLYGLGLA----HKHLPEMQAHAGLARRPIFTP  199 (313)
T ss_pred             HHHHHHHcCCcccCceEEEEEccccccCCccchHHHhhhhhhhccCeeeccCCcC----CcchHHHHHHhccccCcEEEe
Confidence            444333333 2 1   222222333444433222221001112334444544411    2355555555422211     


Q ss_pred             --CCCCCCc--EEEEeC---CcccCHHHHHHHHHHHhcCCCC
Q psy4233         229 --DPDAAGK--IYQAVG---PKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       229 --~~~~~g~--~~~i~~---~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                        .+-..|-  +.++.-   .+.++..|+.+.+.+.++.+.-
T Consensus       200 hl~p~~rGil~Ti~~~~~~~~~~~~~~~i~~~~~~~Y~~epf  241 (313)
T PRK11863        200 SVGNFRQGMLVTVPLHLRLLPGGPTAEDLHAALADHYAGEAF  241 (313)
T ss_pred             eEccccCcEEEEEEEEecccCCCCCHHHHHHHHHHHcCCCCe
Confidence              0112221  233332   5668999999999998875543

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.37  E-value=0.0015  Score=57.82  Aligned_cols=86  Identities=13%  Similarity=0.079  Sum_probs=51.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++|.|+||||++|+.+++.|+++ .++   +..++.+. +....... .   +-.....++.|.+.    ++++|++|.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f-~---g~~~~v~~~~~~~~----~~~~Divf~   71 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSF-G---GKEGTLQDAFDIDA----LKKLDIIIT   71 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCccccc-C---CCcceEEecCChhH----hcCCCEEEE
Confidence            479999999999999999966665 455   66654432 11111111 1   11122233344443    467999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      +++..              .++.+...+.++|.
T Consensus        72 a~~~~--------------~s~~~~~~~~~aG~   90 (369)
T PRK06598         72 CQGGD--------------YTNEVYPKLRAAGW   90 (369)
T ss_pred             CCCHH--------------HHHHHHHHHHhCCC
Confidence            98642              13356666666775

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.36  E-value=0.00035  Score=63.33  Aligned_cols=111  Identities=17%  Similarity=0.055  Sum_probs=72.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC---C----CeEEEeecC-CCcccccchhc------CCCCceEEEecCCCCHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ---G----SQIIIPYRG-NFYDVRDLRLC------GDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~---g----~~V~~~~R~-~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      ++-+|+||||+|.||++|+-.+.+=   |    ..+.+++.. ..+........      .....+.+. .|      ..
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~  194 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LD  194 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CH
Confidence            4568999999999999999998862   2    234555553 12221111100      001122222 11      23


Q ss_pred             HHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEec
Q psy4233          83 KAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGV--EKFIHISA  134 (303)
Q Consensus        83 ~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss  134 (303)
                      +.++++|+||-++|..  ......+..+.|....+.+.++..+...  .+++.+.|
T Consensus       195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            5688999999999974  2345678899999999999999988776  57777765

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.35  E-value=0.0043  Score=47.09  Aligned_cols=106  Identities=20%  Similarity=0.244  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--h--------------------cCCCCceEEEecC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--L--------------------CGDLGQVLFQPYH   74 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--~--------------------~~~~~~~~~~~~D   74 (303)
                      .++|+|.|+ |-+|+.+++.|...|. ++++++...-+....-+  .                    ....-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            368999996 9999999999999995 67777654322111100  0                    0001235566666


Q ss_pred             CCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        75 l~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      + +.+...+.++++|+||.+...             ...-..+-+.|++.+. ++|..++.+.++
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-------------LAARLLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             c-ccccccccccCCCEEEEecCC-------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            6 566778888899999998643             1222357778888887 788777665443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.34  E-value=0.0015  Score=60.32  Aligned_cols=102  Identities=22%  Similarity=0.291  Sum_probs=71.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~   94 (303)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|+++++++.. .+.+...  ..++.++.+|.++.+.+.+ .++++|+||-+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~-~~~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER-AEELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence            44789999997 999999999999999999999887542 2222211  1357889999999998865 45669999866


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ....         +.|.    .+...+++.+..+++....
T Consensus       305 ~~~~---------~~n~----~~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        305 TNDD---------EANI----LSSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             CCCc---------HHHH----HHHHHHHHhCCCeEEEEEC
Confidence            5421         1233    2344556667666665544

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.32  E-value=0.00048  Score=55.45  Aligned_cols=70  Identities=19%  Similarity=0.211  Sum_probs=47.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||++.|.| +|.||+.+++.|.+.||+|+.-+|+.++..+....... +.        -...+..++.+.+|+||-....
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~-~~--------i~~~~~~dA~~~aDVVvLAVP~   70 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG-PL--------ITGGSNEDAAALADVVVLAVPF   70 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc-cc--------cccCChHHHHhcCCEEEEeccH
Confidence            45666666 79999999999999999999997776654443322111 11        1223344566789999887643

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.31  E-value=0.0025  Score=56.42  Aligned_cols=101  Identities=18%  Similarity=0.196  Sum_probs=57.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchh-c-----CCCCc-eEEEec-CCCCHHHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRL-C-----GDLGQ-VLFQPY-HPRNDDEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~-~-----~~~~~-~~~~~~-Dl~d~~~~~~~~~~~D   89 (303)
                      ++|+|+||||++|+++++.|.+++ .++..+.++..+....... .     ..... ..-+.. ++ +++    .+.++|
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D   75 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD   75 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence            589999999999999999998876 6888775443322111110 0     00000 110011 11 222    346799


Q ss_pred             EEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          90 VVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        90 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +|+.+++..              ....+...+.+.|+ ++|..|+..-..
T Consensus        76 vVf~a~p~~--------------~s~~~~~~~~~~G~-~VIDlsg~fR~~  110 (341)
T TIGR00978        76 IVFSALPSE--------------VAEEVEPKLAEAGK-PVFSNASNHRMD  110 (341)
T ss_pred             EEEEeCCHH--------------HHHHHHHHHHHCCC-EEEECChhhccC
Confidence            999887542              11234566666777 667677665443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.29  E-value=0.0029  Score=52.68  Aligned_cols=108  Identities=13%  Similarity=0.069  Sum_probs=67.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--------------------hcCCCC--ceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--------------------LCGDLG--QVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--------------------~~~~~~--~~~~~~   72 (303)
                      +...+|+|.|+ |-+|+++++.|...|. ++++++...-+....-+                    +...-+  +++.+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            45679999995 9999999999999994 66665443211110000                    000012  345555


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      .++ +.+.+.+.++++|+||.+....             ..-..+-+.|.+.++ .+|+.+..+.++
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~~-------------~~r~~l~~~~~~~~i-p~i~~g~~g~~g  149 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDNF-------------ATRYLINDACVKLGK-PLVSGAVLGFEG  149 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            555 4566778889999999987532             112246778888886 788776655433

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.28  E-value=0.0012  Score=52.02  Aligned_cols=58  Identities=19%  Similarity=0.332  Sum_probs=48.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +..+++|+|+|+.+.+|..+++.|.++|.+|++..|+.                          +++.+.+.++|+||.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------~~l~~~l~~aDiVIsa   94 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------KNLKEHTKQADIVIVA   94 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------hhHHHHHhhCCEEEEc
Confidence            35688999999977789999999999999998888752                          3456788889999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus        95 t~~~   98 (168)
T cd01080          95 VGKP   98 (168)
T ss_pred             CCCC
Confidence            8864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.25  E-value=0.0026  Score=51.90  Aligned_cols=108  Identities=15%  Similarity=0.096  Sum_probs=69.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc--------------------hhcCCCCc--eEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL--------------------RLCGDLGQ--VLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~--------------------~~~~~~~~--~~~~~   72 (303)
                      +...+|+|.|+ |-+|+++++.|...|. +++++++..-+....-                    .+....+.  ++.+.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            35679999995 9999999999999994 7888877532110000                    00011122  33444


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      ..+ +.+.+.+.++++|+||.+....             ..-..+-+.|++.++ .+|+.++.+.++
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~~-------------~~r~~l~~~~~~~~i-p~i~~~~~g~~G  149 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDNF-------------ATRYLINDACVALGT-PLISAAVVGFGG  149 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEEeccCeE
Confidence            444 3456778889999999986421             122246778888886 788877665554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG0023|consensus

Probab=97.23  E-value=0.0016  Score=55.64  Aligned_cols=103  Identities=12%  Similarity=0.106  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .++.+.|+|+.| +|.--++...+-|++|++++++..+..+..+..    +.+.+..-..|++.+.++.+-.|.++|++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd~fv~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GADVFVDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc----CcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence            377999999988 999999999999999999999876666655543    355555555588888888877888888876


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      .....           ....+++.++..|  ++|+++-...
T Consensus       256 ~~a~~-----------~~~~~~~~lk~~G--t~V~vg~p~~  283 (360)
T KOG0023|consen  256 NLAEH-----------ALEPLLGLLKVNG--TLVLVGLPEK  283 (360)
T ss_pred             ecccc-----------chHHHHHHhhcCC--EEEEEeCcCC
Confidence            43111           1224667777665  7898885443

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.23  E-value=0.0022  Score=59.00  Aligned_cols=77  Identities=12%  Similarity=0.100  Sum_probs=50.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-ccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~   94 (303)
                      +.+++|+|||++| +|..+++.|++.|++|++.++............. ..++++..++  ++..+   +. ++|.||..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~-~~g~~~~~~~--~~~~~---~~~~~d~vV~s   75 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL-EEGIKVICGS--HPLEL---LDEDFDLMVKN   75 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH-hcCCEEEeCC--CCHHH---hcCcCCEEEEC
Confidence            4578999999977 9999999999999999998875432221111111 1235555443  22221   33 39999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      +|...
T Consensus        76 ~gi~~   80 (447)
T PRK02472         76 PGIPY   80 (447)
T ss_pred             CCCCC
Confidence            98753

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.22  E-value=0.0035  Score=55.98  Aligned_cols=111  Identities=14%  Similarity=0.093  Sum_probs=71.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-C----eEEE--e--ecCCCcccccchh--c----CCCCceEEEecCCCCHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-S----QIII--P--YRGNFYDVRDLRL--C----GDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~----~V~~--~--~R~~~~~~~~~~~--~----~~~~~~~~~~~Dl~d~~~   80 (303)
                      .++-||.|+||+|.+|++++-.|+..+ .    ++.+  +  +++.+. ......  .    ....++.+ ..  .+   
T Consensus        42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~-a~g~a~DL~d~a~~~~~~v~i-~~--~~---  114 (387)
T TIGR01757        42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEA-LEGVAMELEDSLYPLLREVSI-GI--DP---  114 (387)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchh-hhHHHHHHHHhhhhhcCceEE-ec--CC---
Confidence            346799999999999999999999887 2    2333  2  444322 111111  0    00112211 11  12   


Q ss_pred             HHHHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEec
Q psy4233          81 IRKAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMG-VE-KFIHISA  134 (303)
Q Consensus        81 ~~~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss  134 (303)
                       .+.++++|+||.+||..  ....+.+..+.|....+.+...+.++. .. ++|.+|.
T Consensus       115 -y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       115 -YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             -HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence             34578999999999974  234667889999999999999999843 33 5555553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.21  E-value=0.0019  Score=58.02  Aligned_cols=68  Identities=12%  Similarity=0.091  Sum_probs=54.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++|+|.|+ |.+|..++.++.+.|++|++++.++.......       --+.+.+|..|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999997 89999999999999999999988654422221       134566889999999999999998753

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.21  E-value=0.0016  Score=57.27  Aligned_cols=98  Identities=14%  Similarity=0.186  Sum_probs=57.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHh-CCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGK-QGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ...++|.|+||||++|+.+++.|.+ ..++   +..++... +.-+.+...+  ..+.+...   |++.    ++++|++
T Consensus         3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~-saGk~~~~~~--~~l~v~~~---~~~~----~~~~Div   72 (347)
T PRK06728          3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKR-SAGKTVQFKG--REIIIQEA---KINS----FEGVDIA   72 (347)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcc-cCCCCeeeCC--cceEEEeC---CHHH----hcCCCEE
Confidence            3457999999999999999999995 4566   55554432 2222221111  12333323   3333    4679999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      |.+++..              .++.+...+.++|. ++|=.|+..-.
T Consensus        73 f~a~~~~--------------~s~~~~~~~~~~G~-~VID~Ss~fR~  104 (347)
T PRK06728         73 FFSAGGE--------------VSRQFVNQAVSSGA-IVIDNTSEYRM  104 (347)
T ss_pred             EECCChH--------------HHHHHHHHHHHCCC-EEEECchhhcC
Confidence            9988642              12345666666665 56655555443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.20  E-value=0.0011  Score=55.10  Aligned_cols=72  Identities=8%  Similarity=0.179  Sum_probs=48.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------ccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~   88 (303)
                      +.+-+++=-.++|.||.+++++|+++|++|+++++...  ...         .....+|+.+.++..+.+       .++
T Consensus        13 iD~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--l~~---------~~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        13 IDSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--LKP---------EPHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             CCCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--ccc---------ccCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            33334433356999999999999999999999876321  000         001346788776666443       358


Q ss_pred             CEEEEccccC
Q psy4233          89 NVVINLIGRE   98 (303)
Q Consensus        89 D~vi~~a~~~   98 (303)
                      |++||+||..
T Consensus        82 DiLVnnAgv~   91 (227)
T TIGR02114        82 DILIHSMAVS   91 (227)
T ss_pred             CEEEECCEec
Confidence            9999999964

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.20  E-value=0.003  Score=51.55  Aligned_cols=89  Identities=21%  Similarity=0.236  Sum_probs=62.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++|+|+|| |.+|..-++.|++.|.+|++++....+....+.   ...+++++..++.. +    .+.++|.||-+.
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~---~~~~i~~~~~~~~~-~----dl~~~~lVi~at   77 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA---EQGGITWLARCFDA-D----ILEGAFLVIAAT   77 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH---HcCCEEEEeCCCCH-H----HhCCcEEEEECC
Confidence            46789999997 999999999999999999998775443322222   22468999988752 2    256788887665


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      +..         +.|    ..+.+.|++.++
T Consensus        78 ~d~---------~ln----~~i~~~a~~~~i   95 (205)
T TIGR01470        78 DDE---------ELN----RRVAHAARARGV   95 (205)
T ss_pred             CCH---------HHH----HHHHHHHHHcCC
Confidence            432         111    257888887664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.20  E-value=0.0028  Score=54.83  Aligned_cols=103  Identities=16%  Similarity=0.194  Sum_probs=58.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--e-EEEeecCCCccccc-chhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--Q-IIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~-V~~~~R~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +++|.|.||||.+|+.+++.|.++..  + +.++... ++.-.. ....++   ...+.-+..|..    .++++|+++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~-rSaG~~~~~f~~~---~~~v~~~~~~~~----~~~~~Divf~   72 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA-RSAGKKYIEFGGK---SIGVPEDAADEF----VFSDVDIVFF   72 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc-cccCCccccccCc---cccCcccccccc----ccccCCEEEE
Confidence            47999999999999999999999652  3 3333322 221111 111000   001111112222    2348999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      ++|...              ++.+...+.++|   ++.++..+.+--.++.|
T Consensus        73 ~ag~~~--------------s~~~~p~~~~~G---~~VIdnsSa~Rm~~DVP  107 (334)
T COG0136          73 AAGGSV--------------SKEVEPKAAEAG---CVVIDNSSAFRMDPDVP  107 (334)
T ss_pred             eCchHH--------------HHHHHHHHHHcC---CEEEeCCcccccCCCCC
Confidence            998532              235677777777   45556666665544444

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.19  E-value=0.00069  Score=52.64  Aligned_cols=76  Identities=17%  Similarity=0.131  Sum_probs=50.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .++++|+|+|+ |.+|..+++.|.+.| ++|++.+|+.....+......    ...+..+..+.   .+.++++|+||.+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG----ELGIAIAYLDL---EELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh----hcccceeecch---hhccccCCEEEeC
Confidence            45689999997 999999999999986 789999887543222111111    11112223333   3346889999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      .+...
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            87643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.19  E-value=0.0014  Score=59.59  Aligned_cols=37  Identities=19%  Similarity=0.221  Sum_probs=32.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |.+|+|.|+| .|++|..++..|.+.|++|+++++++.
T Consensus         1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~   37 (415)
T PRK11064          1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQH   37 (415)
T ss_pred             CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHH
Confidence            3468999998 599999999999999999999998754

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.15  E-value=0.0012  Score=59.09  Aligned_cols=35  Identities=20%  Similarity=0.289  Sum_probs=32.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      .+++|.|+||+|.+|..+++.|.+.|++|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            46799999999999999999999999999999985

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.15  E-value=0.0093  Score=45.68  Aligned_cols=104  Identities=20%  Similarity=0.207  Sum_probs=64.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc------------------h--hcCCCCc--eEEEecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL------------------R--LCGDLGQ--VLFQPYHPR   76 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~------------------~--~~~~~~~--~~~~~~Dl~   76 (303)
                      +|+|.|+ |-+|+++++.|...|. ++++++...-+.....                  .  .....+.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899996 9999999999999995 6777765421111000                  0  0000122  444555543


Q ss_pred             CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +. .....++++|+||.+...             ......+.+.|++.++ .++..++.+..+
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-------------~~~~~~l~~~~~~~~i-~~i~~~~~g~~g  127 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-------------IAVRRALNRACKELGI-PVIDAGGLGLGG  127 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcCCCcEE
Confidence            33 336677889999998753             1223357888998886 777777665433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.14  E-value=0.00028  Score=56.62  Aligned_cols=78  Identities=27%  Similarity=0.314  Sum_probs=41.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----Cce-EE----E-ecCCCCHHHHHHHhccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQV-LF----Q-PYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~-~~----~-~~Dl~d~~~~~~~~~~~   88 (303)
                      |||.|.| .||+|..++..|.+.||+|++++.++. ..+.+.. +..    ++. ++    + .+.+.-..++...++++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~-~v~~l~~-g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~a   77 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEE-KVEALNN-GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDA   77 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH-HHHHHHT-TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChH-HHHHHhh-ccccccccchhhhhccccccccchhhhhhhhhhhcc
Confidence            7999998 699999999999999999999988643 2221110 000    000 00    0 11222223344556678


Q ss_pred             CEEEEccccCc
Q psy4233          89 NVVINLIGREF   99 (303)
Q Consensus        89 D~vi~~a~~~~   99 (303)
                      |++|-|.+.+.
T Consensus        78 dv~~I~VpTP~   88 (185)
T PF03721_consen   78 DVVFICVPTPS   88 (185)
T ss_dssp             SEEEE----EB
T ss_pred             ceEEEecCCCc
Confidence            99999988643

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.12  E-value=0.0018  Score=47.59  Aligned_cols=70  Identities=20%  Similarity=0.303  Sum_probs=53.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      |+|+|. |-+|..+++.|.+.+.+|+++.+++.. .+.+..    .++.++.+|.+|++.+.++ +.+++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~-~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER-VEELRE----EGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH-HHHHHH----TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH-HHHHHh----cccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578886 899999999999977799999987533 233222    3488999999999999974 566998888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=97.10  E-value=0.0029  Score=54.61  Aligned_cols=81  Identities=12%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ||.|.|||||.|..+++.|..+. .++..++.+..                   .+..+   ..++++++|++|.+++..
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-------------------~~~~~---~~~~~~~~D~vFlalp~~   60 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-------------------KDAAE---RAKLLNAADVAILCLPDD   60 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-------------------cCcCC---HhHhhcCCCEEEECCCHH
Confidence            79999999999999999999986 56666644321                   00112   334557899999887532


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                                    .+..++..+.+.|+ ++|=.|+..-
T Consensus        61 --------------~s~~~~~~~~~~g~-~VIDlSadfR   84 (310)
T TIGR01851        61 --------------AAREAVSLVDNPNT-CIIDASTAYR   84 (310)
T ss_pred             --------------HHHHHHHHHHhCCC-EEEECChHHh
Confidence                          12245555555665 6776666543

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.08  E-value=0.0024  Score=55.48  Aligned_cols=105  Identities=16%  Similarity=0.177  Sum_probs=70.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchh-----cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRL-----CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |.|+|+ |.+|+.++-.|+..|  .++++++++.... .....     ........+...  .|    .+.++++|+||.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~-~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi   72 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKA-KGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH-HHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence            468896 899999999999988  7899999865422 11110     000011222221  12    246789999999


Q ss_pred             ccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          94 LIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        94 ~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ++|...  .....+....|....+.+++.+++++.+ .++.+|
T Consensus        73 tag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          73 TAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999743  2456678888999999999999988754 444444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.08  E-value=0.00093  Score=57.61  Aligned_cols=37  Identities=19%  Similarity=0.225  Sum_probs=33.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      .+.+|.|+|+ |.+|..++..|+..|++|++.++++..
T Consensus         4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            3458999997 999999999999999999999998654

>KOG4022|consensus

Probab=97.06  E-value=0.057  Score=41.65  Aligned_cols=193  Identities=8%  Similarity=0.040  Sum_probs=102.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCC--C-H----HHHHHHhcc--
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N-D----DEIRKAIKY--   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~----~~~~~~~~~--   87 (303)
                      +..+|+|-|+-|-+|++++..+.+++|-|.-++-...+..+.         -.++.+|-+  . .    +.+.+.+.+  
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~---------sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS---------SILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc---------eEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            346899999999999999999999999888887765433221         112233221  1 1    222233333  


Q ss_pred             cCEEEEccccCccccch---------hhhhhhcchHHHHHHHHHh--cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFATKNF---------TIADANVEIPARLARLSKE--MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~~~~~---------~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      .|.||+.||.+...+..         .+.+..+. +..+...+..  .+..-++.+......-  +..  ...-.|+..|
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvw-tSaIsa~lAt~HLK~GGLL~LtGAkaAl--~gT--PgMIGYGMAK  147 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVW-TSAISAKLATTHLKPGGLLQLTGAKAAL--GGT--PGMIGYGMAK  147 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHH-HHHHHHHHHHhccCCCceeeeccccccc--CCC--CcccchhHHH
Confidence            89999999875443322         11111111 1112211111  1222344444333221  111  3456899999


Q ss_pred             HHHHHHHHhh-----CCC----EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         157 YQGEKEVLRE-----FPE----ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       157 ~~~e~~~~~~-----~~~----~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .++.++.+..     |+|    .+.+-|-.+-.|..+             +-.|   + .+. -+|+....+++.++.-.
T Consensus       148 aAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR-------------KwMP---~-ADf-ssWTPL~fi~e~flkWt  209 (236)
T KOG4022|consen  148 AAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR-------------KWMP---N-ADF-SSWTPLSFISEHFLKWT  209 (236)
T ss_pred             HHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc-------------ccCC---C-Ccc-cCcccHHHHHHHHHHHh
Confidence            9999988774     333    222333222223221             1111   1 112 46788888998888766


Q ss_pred             cC--CCCCCcEEEEeC
Q psy4233         228 KD--PDAAGKIYQAVG  241 (303)
Q Consensus       228 ~~--~~~~g~~~~i~~  241 (303)
                      ..  ++..|....+..
T Consensus       210 t~~~RPssGsLlqi~T  225 (236)
T KOG4022|consen  210 TETSRPSSGSLLQITT  225 (236)
T ss_pred             ccCCCCCCCceEEEEe
Confidence            43  333455555543

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.06  E-value=0.0048  Score=51.40  Aligned_cols=36  Identities=25%  Similarity=0.248  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEE-EeecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQII-IPYRGN   52 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~-~~~R~~   52 (303)
                      +||||.|.||+|-+|+.+++.+.+.+ .++. ++.|..
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            36899999999999999999999876 5544 456654

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=97.05  E-value=0.048  Score=50.21  Aligned_cols=92  Identities=17%  Similarity=0.172  Sum_probs=61.1

Q ss_pred             CCCcEEEEEcCC---ChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          16 FNGVVATVFGAS---GYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        16 ~~~~~vlVtGat---G~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      +++++|.|+|+|   |.+|..+++.|++.||  +|+.+..... ....                +.-..++.++-..+|.
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~-~i~G----------------~~~~~sl~~lp~~~Dl   67 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAG-EILG----------------VKAYPSVLEIPDPVDL   67 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCC-ccCC----------------ccccCCHHHCCCCCCE
Confidence            467899999998   7799999999999997  6776654321 1111                1122233333345888


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ++-+....              ....+++.|.+.|++.+|.+|+....
T Consensus        68 avi~vp~~--------------~~~~~l~e~~~~gv~~~vi~s~gf~e  101 (447)
T TIGR02717        68 AVIVVPAK--------------YVPQVVEECGEKGVKGAVVITAGFKE  101 (447)
T ss_pred             EEEecCHH--------------HHHHHHHHHHhcCCCEEEEECCCccc
Confidence            87665432              23357888888899888888765443

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.04  E-value=0.0012  Score=56.72  Aligned_cols=76  Identities=21%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ...+++++|+|+ |.+|+.++.+|...| .+|+++.|+.....+..........+.+   ++    +..+.+.++|+||+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivIn  191 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIIN  191 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEE
Confidence            355789999997 999999999999999 7899999975433222111111010111   11    22345677999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +....
T Consensus       192 aTp~g  196 (278)
T PRK00258        192 ATSAG  196 (278)
T ss_pred             CCcCC
Confidence            98754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.03  E-value=0.0041  Score=55.63  Aligned_cols=76  Identities=20%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .+.+|+|+|+ |-+|...++.|...|.+|++++|+.... +.+....  .  ..+..+..+.+.+.+.++++|+||++++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-~~l~~~~--g--~~v~~~~~~~~~l~~~l~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-RQLDAEF--G--GRIHTRYSNAYEIEDAVKRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHhc--C--ceeEeccCCHHHHHHHHccCCEEEEccc
Confidence            4568999987 9999999999999999999998874321 1111100  1  1223445677888888999999999986


Q ss_pred             cC
Q psy4233          97 RE   98 (303)
Q Consensus        97 ~~   98 (303)
                      .+
T Consensus       240 ~~  241 (370)
T TIGR00518       240 IP  241 (370)
T ss_pred             cC
Confidence            53

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.03  E-value=0.00081  Score=50.25  Aligned_cols=38  Identities=21%  Similarity=0.409  Sum_probs=27.7

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      +......++|.|+|+ |.+|.+|.+.|.+.||+|..+..
T Consensus         4 ~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s   41 (127)
T PF10727_consen    4 PATQAARLKIGIIGA-GRVGTALARALARAGHEVVGVYS   41 (127)
T ss_dssp             --------EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred             cccCCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence            333445679999997 99999999999999999988743

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=97.02  E-value=0.0031  Score=54.98  Aligned_cols=68  Identities=10%  Similarity=0.124  Sum_probs=55.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++|.|.|| |.+|+-++.+....|++|++++-.++.......       -..+..+.+|++.+.++.+++|+|-.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------DRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------cceeecCCCCHHHHHHHHhhCCEEEE
Confidence            578999996 999999999999999999999877655443321       34567777899999999999999853

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.02  E-value=0.0019  Score=50.79  Aligned_cols=35  Identities=26%  Similarity=0.339  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      ||+|.++|- |-+|+.+++.|+++|++|++.+|++.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~   35 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPE   35 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchh
Confidence            689999995 99999999999999999999998753

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.02  E-value=0.012  Score=49.25  Aligned_cols=108  Identities=15%  Similarity=0.133  Sum_probs=67.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCCc--eEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~   72 (303)
                      +...+|+|.|+ |.+|+.++..|...| .++++++...-+....-+                    +...-+.  ++.+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            45679999996 999999999999999 567776654322111000                    0000122  34444


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      ..+ +.+.+.+.++++|+||.+....             ..-..+-++|.+.++ ++|+.++.+.++
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~~-------------~~r~~ln~~~~~~~i-p~v~~~~~g~~G  152 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDNV-------------EVRNQLNRQCFAAKV-PLVSGAAIRMEG  152 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEecccEe
Confidence            333 3456777889999999987432             112246678888886 788766555444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.01  E-value=0.0054  Score=49.78  Aligned_cols=107  Identities=15%  Similarity=0.145  Sum_probs=65.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~   72 (303)
                      ++..+|+|.|+.| +|+++++.|...| .++++++...-+....                      ++.....-+++.+.
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            3467999999755 9999999999999 4677776543211110                      01001012344444


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      ..+.  +...+.++++|+||.+...             ......+-+.|++.++ .+|+.++.+-++
T Consensus        98 ~~~~--~~~~~~~~~~dvVi~~~~~-------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  148 (197)
T cd01492          98 DDIS--EKPEEFFSQFDVVVATELS-------------RAELVKINELCRKLGV-KFYATGVHGLFG  148 (197)
T ss_pred             cCcc--ccHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEecCCEE
Confidence            4443  2234567889999987432             1122346678888887 788888766655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.01  E-value=0.0097  Score=48.89  Aligned_cols=109  Identities=17%  Similarity=0.206  Sum_probs=68.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc--cc-c------------------chhcCCCCceEEEec
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD--VR-D------------------LRLCGDLGQVLFQPY   73 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~--~~-~------------------~~~~~~~~~~~~~~~   73 (303)
                      +...+|+|.|+ |-+|+.+++.|...|. ++++++...-+.  .. .                  +......-+++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            35678999996 9999999999999994 577776652111  00 0                  000001123455555


Q ss_pred             CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC
Q psy4233          74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN  140 (303)
Q Consensus        74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~  140 (303)
                      .+++ +.+.+.++++|+||.+...             ...-..+.+.+.+. ++ .+|+.+..+.++.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D~-------------~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~  157 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFDN-------------AETKAMLVETVLEHPGK-KLVAASGMAGYGD  157 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCCC-------------HHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence            5543 5566788899999998422             11222466777776 64 7888776655553

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.01  E-value=0.0022  Score=56.27  Aligned_cols=97  Identities=23%  Similarity=0.238  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.++|.|.||||++|+.+++.|.++.   .++..++.. .+.-+.+...+  ..+++-  ++ +.    ..+.++|++|.
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~-~saG~~~~~~~--~~~~v~--~~-~~----~~~~~~Dvvf~   72 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE-ESAGETLRFGG--KSVTVQ--DA-AE----FDWSQAQLAFF   72 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc-CcCCceEEECC--cceEEE--eC-ch----hhccCCCEEEE
Confidence            46799999999999999999999854   466666443 22222222111  112211  22 11    12467999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      +++..              .+..++..+.+.|+ ++|=.|+..-.
T Consensus        73 a~p~~--------------~s~~~~~~~~~~g~-~VIDlS~~fRl  102 (336)
T PRK08040         73 VAGRE--------------ASAAYAEEATNAGC-LVIDSSGLFAL  102 (336)
T ss_pred             CCCHH--------------HHHHHHHHHHHCCC-EEEECChHhcC
Confidence            88542              12245666655666 67766655543

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=97.00  E-value=0.0043  Score=56.11  Aligned_cols=71  Identities=14%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      ..|+|+|+|+ |..|..+++++.+.|++|++++.++.......       .-.++..|..|.+.+.++.+  ++|.|+..
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------ad~~~~~~~~d~~~l~~~~~~~~id~vi~~   82 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------AHRSHVIDMLDGDALRAVIEREKPDYIVPE   82 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------hhheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence            3678999996 89999999999999999999988654321111       01356778889998888887  69999864


Q ss_pred             c
Q psy4233          95 I   95 (303)
Q Consensus        95 a   95 (303)
                      .
T Consensus        83 ~   83 (395)
T PRK09288         83 I   83 (395)
T ss_pred             e
Confidence            3

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.98  E-value=0.0047  Score=54.58  Aligned_cols=102  Identities=16%  Similarity=0.121  Sum_probs=58.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHH-hCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLG-KQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll-~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++|.|.||||.+|+.+++.|. ++.++   ++.++.+ .+.-.... +.. ...++.  ++.+.+    .+.++|+++.+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~-~s~g~~~~-f~~-~~~~v~--~~~~~~----~~~~vDivffa   71 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS-QLGQAAPS-FGG-TTGTLQ--DAFDID----ALKALDIIITC   71 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch-hhCCCcCC-CCC-CcceEE--cCcccc----cccCCCEEEEc
Confidence            489999999999999999999 55554   4444332 11111111 111 112222  232221    35789999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY  144 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~  144 (303)
                      +|..              .++.+...+.++|. ..+.++..+.+--+++.
T Consensus        72 ~g~~--------------~s~~~~p~~~~aG~-~~~VIDnSSa~Rmd~dV  106 (366)
T TIGR01745        72 QGGD--------------YTNEIYPKLRESGW-QGYWIDAASSLRMKDDA  106 (366)
T ss_pred             CCHH--------------HHHHHHHHHHhCCC-CeEEEECChhhhcCCCC
Confidence            9753              23457777777885 23444555555443333

>PRK08328 hypothetical protein; Provisional

Probab=96.98  E-value=0.0058  Score=50.93  Aligned_cols=109  Identities=15%  Similarity=0.138  Sum_probs=68.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc-----------------------chhcCCCCceEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD-----------------------LRLCGDLGQVLFQ   71 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~~~   71 (303)
                      ....+|+|.|+ |-+|+++++.|...| .++++++...-+....                       +......-+++.+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            34668999996 999999999999999 5677765432111000                       0000111224445


Q ss_pred             ecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233          72 PYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN  140 (303)
Q Consensus        72 ~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  140 (303)
                      ...+ +.+.+.+.++++|+||.+....             ..-..+-++|++.++ ++|+.++.+.++.
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~-------------~~r~~l~~~~~~~~i-p~i~g~~~g~~G~  157 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNF-------------ETRYLLDDYAHKKGI-PLVHGAVEGTYGQ  157 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence            5555 4555777888999999986431             111235567888886 7888777666653

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.97  E-value=0.015  Score=48.89  Aligned_cols=108  Identities=14%  Similarity=0.088  Sum_probs=67.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~   72 (303)
                      ....+|+|.|+ |-+|+++++.|...| .++++++...-+....                      +......-+++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            45779999997 999999999999999 4677665532211100                      00001012345555


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      ..++ .+.+.+.++++|+||.+....             ..-..+-++|.+.++ .+|+.++.+.++
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~~-------------~~r~~ln~~~~~~~i-p~v~~~~~g~~G  160 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDNV-------------ATRNQLNRACFAAKK-PLVSGAAIRMEG  160 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCCH-------------HHHHHHHHHHHHhCC-EEEEeeeccCCc
Confidence            5553 456777889999999996421             112246677888776 777765544433

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.95  E-value=0.0027  Score=55.66  Aligned_cols=89  Identities=18%  Similarity=0.283  Sum_probs=67.2

Q ss_pred             ccCEEEEccccCccc---cchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          87 YSNVVINLIGREFAT---KNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~---~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      +++.+|.+.|....+   .......++..-...|+++..    +.+.|++|.++|.+....      ....+|.+.|...
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~------s~~f~Yfk~K~~L  276 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAI------SSMFPYFKTKGEL  276 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchh------hhhhhhhHHHHHH
Confidence            346788888864322   223455666666777888877    677899999999887653      4557999999999


Q ss_pred             HHHHHhhC----CCEEEEeecceeeC
Q psy4233         160 EKEVLREF----PEATIFRPSDMYGS  181 (303)
Q Consensus       160 e~~~~~~~----~~~~ilrp~~~~G~  181 (303)
                      |+.+....    -..+|+|||.+.|.
T Consensus       277 E~dl~~~l~~~l~~lvILRPGplvG~  302 (410)
T PF08732_consen  277 ENDLQNLLPPKLKHLVILRPGPLVGE  302 (410)
T ss_pred             HHHHHhhcccccceEEEecCccccCC
Confidence            99998862    37999999999994

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.93  E-value=0.019  Score=48.72  Aligned_cols=109  Identities=16%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCCc--eEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~   72 (303)
                      +...+|+|.|+ |.+|+++++.|.+.| .++++++...-.....-+                    .....+.  ++.+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            45679999995 999999999999999 678877654221110000                    0001123  33332


Q ss_pred             cCCCCHHHHHHHhc-ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233          73 YHPRNDDEIRKAIK-YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN  140 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~-~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  140 (303)
                       +..+++...+++. ++|+||.+....             ..-..|.+.|++.++ ++|.+.+.+..-+
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~~-------------~~k~~L~~~c~~~~i-p~I~~gGag~k~d  160 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDSV-------------RPKAALIAYCRRNKI-PLVTTGGAGGQID  160 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEECCcccCCC
Confidence             2334566666664 599999987642             122258888998886 7776666555443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.91  E-value=0.0016  Score=59.20  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=30.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |+|.|+| .|++|..++..|.+.|++|++++++..
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~   34 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQE   34 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHH
Confidence            5899998 599999999999999999999998754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.89  E-value=0.0056  Score=56.93  Aligned_cols=77  Identities=16%  Similarity=0.128  Sum_probs=52.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...+++|+|+|+ |.+|..+++.|.++|++|+++++++..............+++++.++-..      ...++|.||..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s   85 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS   85 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence            356789999997 99999999999999999999987643222211111111357776654322      23569999998


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .|..
T Consensus        86 ~Gi~   89 (480)
T PRK01438         86 PGWR   89 (480)
T ss_pred             CCcC
Confidence            8874

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.89  E-value=0.0061  Score=55.81  Aligned_cols=76  Identities=12%  Similarity=0.066  Sum_probs=54.2

Q ss_pred             cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233          15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   78 (303)
                      .+.+++||||+|                ||..|.+|++++..+|.+|++++-....  .      ...+++++...  ..
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~--~------~p~~v~~i~V~--ta  322 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL--A------DPQGVKVIHVE--SA  322 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC--C------CCCCceEEEec--CH
Confidence            478899999964                7999999999999999999998743221  1      11346666554  45


Q ss_pred             HHHHHHhcc---cCEEEEccccCcc
Q psy4233          79 DEIRKAIKY---SNVVINLIGREFA  100 (303)
Q Consensus        79 ~~~~~~~~~---~D~vi~~a~~~~~  100 (303)
                      .++.+.+..   .|++|++|+..+.
T Consensus       323 ~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        323 RQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             HHHHHHHHhhCCCCEEEEeccccce
Confidence            555444432   7999999997443

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.87  E-value=0.0026  Score=55.36  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=66.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchh--cC--C--CCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRL--CG--D--LGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~--~~--~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |.|+|| |.+|..++..|..+|. +|+++++++... .....  ..  .  ..... +... .|   . +.++++|+||.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~-~g~~~dl~~~~~~~~~~~~-I~~t-~d---~-~~l~dADiVIi   72 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLP-QGKALDISQAAPILGSDTK-VTGT-ND---Y-EDIAGSDVVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHH-HHHHHHHHHhhhhcCCCeE-EEEc-CC---H-HHhCCCCEEEE
Confidence            578998 9999999999998875 999999875422 11111  00  0  00111 1111 12   2 34789999999


Q ss_pred             ccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceE-EEEe
Q psy4233          94 LIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKF-IHIS  133 (303)
Q Consensus        94 ~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-v~~S  133 (303)
                      +++....  ....+....|+...+.+++.+.+...+.+ |.+|
T Consensus        73 t~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          73 TAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             ecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9986422  22334556788888889998888775544 4444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.86  E-value=0.013  Score=49.38  Aligned_cols=93  Identities=16%  Similarity=0.259  Sum_probs=67.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~   96 (303)
                      |+|||.|||+ =|..|+..|.++|+ |++.+-..... ....  ...+..+++.+-+.|.+.+.+.++  +++.||+..-
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-~~~~--~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH   75 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-ELLK--PELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH   75 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-hhhc--cccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence            7999999986 59999999999998 65544432211 1110  111346788888889999999986  4999999976


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCc
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVE  127 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  127 (303)
                      +..           ...+.++.++|++.|++
T Consensus        76 PfA-----------~~is~na~~a~~~~~ip   95 (249)
T PF02571_consen   76 PFA-----------AEISQNAIEACRELGIP   95 (249)
T ss_pred             chH-----------HHHHHHHHHHHhhcCcc
Confidence            542           23466889999999884

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.85  E-value=0.0017  Score=56.04  Aligned_cols=35  Identities=26%  Similarity=0.193  Sum_probs=31.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .++|.|+|+ |.+|..++..|...|++|++.+++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~   37 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDE   37 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence            468999996 99999999999999999999998754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.84  E-value=0.0019  Score=55.59  Aligned_cols=71  Identities=15%  Similarity=0.238  Sum_probs=51.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++.+++++|+|+ |.+|+.+++.|...|.+|++.+|+.... ......    +...     ...+++.+.++++|+||++
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~-~~~~~~----g~~~-----~~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL-ARITEM----GLIP-----FPLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHC----CCee-----ecHHHHHHHhccCCEEEEC
Confidence            456789999997 8899999999999999999999975422 111111    1111     1345677788899999998


Q ss_pred             cc
Q psy4233          95 IG   96 (303)
Q Consensus        95 a~   96 (303)
                      ..
T Consensus       217 ~P  218 (287)
T TIGR02853       217 IP  218 (287)
T ss_pred             CC
Confidence            74

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.83  E-value=0.002  Score=58.94  Aligned_cols=68  Identities=18%  Similarity=0.228  Sum_probs=46.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |+|+|+||+|.+|..+++.|.+.|++|++.+|++....+.....    ++.       -..+..+.+.++|+||-+...
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~----gv~-------~~~~~~e~~~~aDvVIlavp~   68 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL----GVE-------YANDNIDAAKDADIVIISVPI   68 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc----CCe-------eccCHHHHhccCCEEEEecCH
Confidence            58999999999999999999999999999998754321111110    121       011233456778998888754

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.81  E-value=0.0022  Score=55.52  Aligned_cols=70  Identities=17%  Similarity=0.185  Sum_probs=51.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +.+++++|+|+ |.+|+.++..|...|.+|++.+|++... .....    .+.+++     +.+++.+.+.++|+||+++
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~----~G~~~~-----~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL-ARITE----MGLSPF-----HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----cCCeee-----cHHHHHHHhCCCCEEEECC
Confidence            45789999996 8899999999999999999999985431 11111    112222     3356677888999999986


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus       219 p  219 (296)
T PRK08306        219 P  219 (296)
T ss_pred             C
Confidence            4

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.0049  Score=52.83  Aligned_cols=57  Identities=18%  Similarity=0.349  Sum_probs=46.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +..+++|+|+|++|.+|+.++..|+++|..|+++.|..                          .++.+.++++|+||++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t--------------------------~~L~~~~~~aDIvI~A  209 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT--------------------------QNLPELVKQADIIVGA  209 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc--------------------------hhHHHHhccCCEEEEc
Confidence            45788999999999999999999999999888887631                          1244555789999999


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      .|.
T Consensus       210 tG~  212 (283)
T PRK14192        210 VGK  212 (283)
T ss_pred             cCC
Confidence            974

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.78  E-value=0.019  Score=51.05  Aligned_cols=107  Identities=15%  Similarity=0.081  Sum_probs=67.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~   72 (303)
                      +...+|+|.|+ |.+|+++++.|...| .++++++...-+....                      ++.....-+++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            45679999996 999999999999999 4677766653211110                      00000012244555


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ..++ .+...+.++++|+||.+....             ..-..+-++|.+.++ .+|+.++.+-+
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~~-------------~~r~~~n~~c~~~~i-p~v~~~~~g~~  155 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDNF-------------DTRHLASWAAARLGI-PHVWASILGFD  155 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEEEecCe
Confidence            5553 455667889999999997431             111235677888886 67776654443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.78  E-value=0.015  Score=46.18  Aligned_cols=105  Identities=14%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCc--ccc-c------------------chhcCCCCceEEEecCCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFY--DVR-D------------------LRLCGDLGQVLFQPYHPRN   77 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~--~~~-~------------------~~~~~~~~~~~~~~~Dl~d   77 (303)
                      +|+|.|+ |-+|+.+++.|...|. ++++++...-+  ... .                  +......-+++.+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899996 9999999999999995 58887765311  100 0                  000000123444555553 


Q ss_pred             HHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC
Q psy4233          78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN  140 (303)
Q Consensus        78 ~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~  140 (303)
                      .+.+.+.++++|+||.+....             ..-..+.+.+.+. ++ .+|+.+..+.++.
T Consensus        79 ~~~~~~~l~~~DlVi~~~d~~-------------~~r~~i~~~~~~~~~i-p~i~~~~~~~~~~  128 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFDNA-------------ETKAMLAESLLGNKNK-PVVCASGMAGFGD  128 (174)
T ss_pred             hhhHHHHhcCCCEEEECCCCH-------------HHHHHHHHHHHHHCCC-CEEEEehhhccCC
Confidence            355777889999999984321             1112366666665 64 7777665555543

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.77  E-value=0.0031  Score=53.95  Aligned_cols=74  Identities=15%  Similarity=0.090  Sum_probs=47.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .+++++|+|+ |.+|+.++..|.+.|++|+++.|+..+..+..........+..+  ++.+     ..+.++|+||++.+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp  187 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATS  187 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCC
Confidence            4678999998 89999999999999999999988754322221111111112221  1111     12356999999988


Q ss_pred             cC
Q psy4233          97 RE   98 (303)
Q Consensus        97 ~~   98 (303)
                      ..
T Consensus       188 ~g  189 (270)
T TIGR00507       188 AG  189 (270)
T ss_pred             CC
Confidence            64

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.77  E-value=0.019  Score=49.95  Aligned_cols=105  Identities=15%  Similarity=0.076  Sum_probs=66.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQPYHPR   76 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~   76 (303)
                      +|||+|+ |.+|.++++.|...| .++++++...-+....                      ++.....-+++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899996 999999999999999 5677765543221111                      000011123556667776


Q ss_pred             CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +.....+.++++|+||.+.-.             ...-..+-+.|...++ .+|..++.+.+|
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn-------------~~ar~~in~~c~~~~i-p~I~~gt~G~~G  128 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDN-------------LAARRHVNKMCLAADV-PLIESGTTGFLG  128 (312)
T ss_pred             CccchHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHCCC-CEEEEecCccee
Confidence            644445678899999988642             1222246677777776 788777766544

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.77  E-value=0.0025  Score=50.84  Aligned_cols=70  Identities=14%  Similarity=0.132  Sum_probs=48.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ....+++|.|+| .|-||+.+++.|..-|.+|++.+|+....... ..    ..+        ...+++++++.+|+|+.
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~----~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DE----FGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HH----TTE--------EESSHHHHHHH-SEEEE
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhc-cc----ccc--------eeeehhhhcchhhhhhh
Confidence            346789999999 59999999999999999999999986543201 00    001        23356678888999997


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus        98 ~~pl  101 (178)
T PF02826_consen   98 HLPL  101 (178)
T ss_dssp             -SSS
T ss_pred             hhcc
Confidence            7664

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.76  E-value=0.002  Score=53.32  Aligned_cols=36  Identities=33%  Similarity=0.410  Sum_probs=32.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      |||.|+||+|.+|+.+++.|.+.|++|++.+|++..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            589999999999999999999999999999887543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08223 hypothetical protein; Validated

Probab=96.74  E-value=0.022  Score=48.75  Aligned_cols=108  Identities=11%  Similarity=0.058  Sum_probs=65.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCC--ceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLG--QVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~--~~~~~~   72 (303)
                      +...+|+|+|+ |-+|+.++..|...| .++++++...-+....-+                    ....-+  +++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34668999996 999999999999999 566666554322111000                    000012  244455


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      ..++ .+...++++++|+||.+.-..           ++..-..+-++|.+.++ .+|+.+..+.
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~~-----------~~~~r~~ln~~c~~~~i-P~V~~~~~g~  155 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDFF-----------EFDARRLVFAACQQRGI-PALTAAPLGM  155 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCCC-----------cHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence            5553 445677888999998765321           01122346778888886 7777665443

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.71  E-value=0.0022  Score=56.46  Aligned_cols=79  Identities=22%  Similarity=0.216  Sum_probs=52.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----CceE-EEe---cC--CCCHHHHHHHhccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQVL-FQP---YH--PRNDDEIRKAIKYS   88 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~~-~~~---~D--l~d~~~~~~~~~~~   88 (303)
                      |||.|.| +||+|....-.|.+.||+|++++..+.+ .+.+.. +..    ++++ +++   .+  ++-..+...+++++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~K-V~~ln~-g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a   77 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESK-VELLNK-GISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA   77 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHhC-CCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence            7999999 6999999999999999999999886432 222110 000    1110 011   11  33345566788899


Q ss_pred             CEEEEccccCcc
Q psy4233          89 NVVINLIGREFA  100 (303)
Q Consensus        89 D~vi~~a~~~~~  100 (303)
                      |++|-+.|.+..
T Consensus        78 dv~fIavgTP~~   89 (414)
T COG1004          78 DVVFIAVGTPPD   89 (414)
T ss_pred             CEEEEEcCCCCC
Confidence            999999987543

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.70  E-value=0.0063  Score=53.19  Aligned_cols=77  Identities=12%  Similarity=0.021  Sum_probs=49.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---ch-------hcCCCCceEEEecCCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LR-------LCGDLGQVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~-------~~~~~~~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      .++|.|+|+ |.+|..++..|+..|++|++.++++......   +.       ..+..+.  -....+.-.+++.+++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~l~~av~~   83 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPG--ASPARLRFVATIEACVAD   83 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChh--hHHhhceecCCHHHHhcC
Confidence            468999996 9999999999999999999999975432110   00       0000000  000111122346677889


Q ss_pred             cCEEEEcccc
Q psy4233          88 SNVVINLIGR   97 (303)
Q Consensus        88 ~D~vi~~a~~   97 (303)
                      +|.||-++..
T Consensus        84 aDlViEavpE   93 (321)
T PRK07066         84 ADFIQESAPE   93 (321)
T ss_pred             CCEEEECCcC
Confidence            9999998754

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.68  E-value=0.0088  Score=48.75  Aligned_cols=72  Identities=15%  Similarity=0.134  Sum_probs=49.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++|+|+|| |-+|...++.|++.|++|+++++........+..   ...+.+..-++..     ..+.++|.||-+.
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~---~~~i~~~~~~~~~-----~~l~~adlViaaT   78 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE---EGKIRWKQKEFEP-----SDIVDAFLVIAAT   78 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh---CCCEEEEecCCCh-----hhcCCceEEEEcC
Confidence            56889999997 9999999999999999999987653322222111   1335555544332     2356789888775


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus        79 ~   79 (202)
T PRK06718         79 N   79 (202)
T ss_pred             C
Confidence            4

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.68  E-value=0.0079  Score=51.38  Aligned_cols=58  Identities=19%  Similarity=0.355  Sum_probs=49.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.+++|+|+|+++.+|..++..|+++|..|+.+.++.                          .++.+.++++|+||.+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------~~l~~~~~~ADIVIsA  208 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------KDMASYLKDADVIVSA  208 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------hhHHHHHhhCCEEEEC
Confidence            46789999999999999999999999999999887642                          1366778889999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      +|..
T Consensus       209 vg~p  212 (286)
T PRK14175        209 VGKP  212 (286)
T ss_pred             CCCC
Confidence            9874

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.67  E-value=0.012  Score=52.78  Aligned_cols=107  Identities=15%  Similarity=0.073  Sum_probs=67.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc------------------cccch--hcCCCCc--eEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD------------------VRDLR--LCGDLGQ--VLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~------------------~~~~~--~~~~~~~--~~~~~   72 (303)
                      +...+|+|.|+ |.+|++++..|...|. +++++++..-+.                  .+...  +...-+.  ++.+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34668999986 8899999999999994 688877752110                  00000  0000122  34444


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ..+ +.+.+.+.++++|+||++.....             .-..+-++|.+.++ .+|+.+..+.+
T Consensus       212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~~-------------~r~~ln~~~~~~~i-p~i~~~~~g~~  262 (376)
T PRK08762        212 ERV-TSDNVEALLQDVDVVVDGADNFP-------------TRYLLNDACVKLGK-PLVYGAVFRFE  262 (376)
T ss_pred             ccC-ChHHHHHHHhCCCEEEECCCCHH-------------HHHHHHHHHHHcCC-CEEEEEeccCE
Confidence            444 34566778889999999975321             11236678888886 78887755443

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.67  E-value=0.0027  Score=57.49  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=53.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++|+|.|+ |-+|+.+++.|.+.| .++++..|+.... ..+....  +.     +.....+++.+.+.++|+||++
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~--~~-----~~~~~~~~l~~~l~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAF--RN-----ASAHYLSELPQLIKKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHh--cC-----CeEecHHHHHHHhccCCEEEEC
Confidence            45789999997 999999999999999 5788888875432 3222110  11     1223456777888999999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      .+.+.
T Consensus       250 T~a~~  254 (414)
T PRK13940        250 VNVLE  254 (414)
T ss_pred             cCCCC
Confidence            98754

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.66  E-value=0.0027  Score=55.52  Aligned_cols=74  Identities=26%  Similarity=0.314  Sum_probs=52.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++|+|+|+ |-+|..+++.|...| .+|++++|+.....+.....+    .     +..+.+++.+.+.++|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~-----~~~~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----G-----NAVPLDELLELLNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----C-----eEEeHHHHHHHHhcCCEEEEC
Confidence            35789999997 999999999999876 688888887543322211111    1     122345677778889999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      .+...
T Consensus       246 t~~~~  250 (311)
T cd05213         246 TGAPH  250 (311)
T ss_pred             CCCCc
Confidence            88643

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.65  E-value=0.0088  Score=51.13  Aligned_cols=74  Identities=12%  Similarity=0.048  Sum_probs=45.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ++|++++|.|.| .|.||+.+++.|.+.  ++++.++..+..+..+......  . ..   .-..+   +++++.++|+|
T Consensus         2 ~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~--g-~~---~~~~~---~eell~~~D~V   71 (271)
T PRK13302          2 SSRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL--R-RP---PPVVP---LDQLATHADIV   71 (271)
T ss_pred             CCCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc--C-CC---cccCC---HHHHhcCCCEE
Confidence            346678999999 599999999999873  6888765443333222211100  0 00   00123   34456779999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      +-+++.
T Consensus        72 vi~tp~   77 (271)
T PRK13302         72 VEAAPA   77 (271)
T ss_pred             EECCCc
Confidence            999864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.65  E-value=0.003  Score=57.52  Aligned_cols=73  Identities=22%  Similarity=0.294  Sum_probs=52.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++|+|+|+ |-+|..+++.|...| .+|++++|+...........+    ...     .+.+++.+.+.++|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g----~~~-----i~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG----GEA-----VKFEDLEEYLAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----CeE-----eeHHHHHHHHhhCCEEEEC
Confidence            45679999997 999999999999999 789999997543222211111    111     2335677788899999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus       248 T~s~  251 (417)
T TIGR01035       248 TGAP  251 (417)
T ss_pred             CCCC
Confidence            7654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.64  E-value=0.0087  Score=46.65  Aligned_cols=69  Identities=14%  Similarity=0.244  Sum_probs=45.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++|+|+|| |-+|...++.|++.|++|++++....   +.+..   ++.+++..-.+...     -+.++|.||-+.
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~---~~l~~---l~~i~~~~~~~~~~-----dl~~a~lViaaT   78 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEIC---KEMKE---LPYITWKQKTFSND-----DIKDAHLIYAAT   78 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccC---HHHHh---ccCcEEEecccChh-----cCCCceEEEECC
Confidence            46889999997 99999999999999999998853222   22211   13455544443222     246688887664


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      .
T Consensus        79 ~   79 (157)
T PRK06719         79 N   79 (157)
T ss_pred             C
Confidence            3

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.64  E-value=0.0049  Score=45.85  Aligned_cols=74  Identities=11%  Similarity=0.106  Sum_probs=43.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |+.|+|++|.+|..+++.|.+. ++++.++..++.+..+.....  .+++..+..+..+.+.+.  ..++|+||.+.+.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~~   75 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEA--GPHLKGEVVLELEPEDFE--ELAVDIVFLALPH   75 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHH--CcccccccccccccCChh--hcCCCEEEEcCCc
Confidence            5899999999999999999995 788888733332222222111  122211111112223332  2579999988765

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.64  E-value=0.035  Score=46.14  Aligned_cols=109  Identities=12%  Similarity=0.120  Sum_probs=65.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc---c----------h-------hcCCCCc--eEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD---L----------R-------LCGDLGQ--VLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~---~----------~-------~~~~~~~--~~~~~   72 (303)
                      ++..+|+|.|. |-+|+++++.|.+.| .++++++...-+....   +          +       +...-+.  ++.+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            34679999995 999999999999999 4677765542111000   0          0       0000122  34444


Q ss_pred             cCCCCHHHHHHHhc-ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233          73 YHPRNDDEIRKAIK-YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN  140 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~-~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  140 (303)
                      ..+ +++.....+. ++|+||.+....             ..-..|.+.|++.++ ++|...+.+...+
T Consensus        88 ~~i-~~~~~~~l~~~~~D~VvdaiD~~-------------~~k~~L~~~c~~~~i-p~I~s~g~g~~~d  141 (231)
T cd00755          88 EFL-TPDNSEDLLGGDPDFVVDAIDSI-------------RAKVALIAYCRKRKI-PVISSMGAGGKLD  141 (231)
T ss_pred             eec-CHhHHHHHhcCCCCEEEEcCCCH-------------HHHHHHHHHHHHhCC-CEEEEeCCcCCCC
Confidence            443 3455666664 599999986431             222357888998886 7776655555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.63  E-value=0.0083  Score=53.06  Aligned_cols=102  Identities=14%  Similarity=0.111  Sum_probs=57.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchh-cC-----CCCc-eE-EEecCCCCHHHHHHHhccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRL-CG-----DLGQ-VL-FQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~-~~-----~~~~-~~-~~~~Dl~d~~~~~~~~~~~   88 (303)
                      |+||.|.|+ |.+|+.+++.+.++ +.++.++.....+....+.. .+     ..+. .. +-..++.-.+....++.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            479999998 99999999998875 47888876543221111110 00     0000 00 0000111112234455789


Q ss_pred             CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      |+||.+++...              ....++.+.++| +++|+.++.
T Consensus        80 DVVIdaT~~~~--------------~~e~a~~~~~aG-k~VI~~~~~  111 (341)
T PRK04207         80 DIVVDATPGGV--------------GAKNKELYEKAG-VKAIFQGGE  111 (341)
T ss_pred             CEEEECCCchh--------------hHHHHHHHHHCC-CEEEEcCCC
Confidence            99999986532              124566777778 577776664

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.60  E-value=0.0065  Score=53.43  Aligned_cols=100  Identities=18%  Similarity=0.190  Sum_probs=61.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~~   94 (303)
                      +.+|||+||+|-+|+..++.+...|..+++.+.+..+.. ..+..+   -.+.+...-.| .+.+.++..  ++|+|+++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lG---Ad~vi~y~~~~~~~~v~~~t~g~gvDvv~D~  218 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELG---ADHVINYREEDFVEQVRELTGGKGVDVVLDT  218 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcC---CCEEEcCCcccHHHHHHHHcCCCCceEEEEC
Confidence            679999999999999999999999976666666543332 322222   12223222222 233334443  49999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      .|.....              ..+++++..  .+++.+...+.
T Consensus       219 vG~~~~~--------------~~l~~l~~~--G~lv~ig~~~g  245 (326)
T COG0604         219 VGGDTFA--------------ASLAALAPG--GRLVSIGALSG  245 (326)
T ss_pred             CCHHHHH--------------HHHHHhccC--CEEEEEecCCC
Confidence            8863211              345555544  37888877664

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.60  E-value=0.0059  Score=53.29  Aligned_cols=36  Identities=22%  Similarity=0.262  Sum_probs=32.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +.|+|.|.|+ |.+|+.+++.|.+.|++|++..|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4579999985 99999999999999999999999753

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.59  E-value=0.0033  Score=57.35  Aligned_cols=73  Identities=25%  Similarity=0.314  Sum_probs=52.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++|+|+|+ |-+|..+++.|...|. +|++..|+...........+         ++..+.+++.+.+.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---------~~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---------GEAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---------CcEeeHHHHHHHhccCCEEEEC
Confidence            45789999996 9999999999999996 78888887543222211111         1223345667778889999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus       250 T~s~  253 (423)
T PRK00045        250 TGAP  253 (423)
T ss_pred             CCCC
Confidence            8754

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=96.57  E-value=0.022  Score=52.58  Aligned_cols=73  Identities=11%  Similarity=-0.074  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhc--cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIK--YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~   88 (303)
                      |+||||.|+ |.+|..+++++.+.|++|+++...........+.    . -+.+..       +..|.+.+.++.+  ++
T Consensus         2 ~k~iLi~g~-g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~----a-d~~~~~~~~~~~~~y~d~~~l~~~a~~~~i   75 (451)
T PRK08591          2 FDKILIANR-GEIALRIIRACKELGIKTVAVHSTADRDALHVQL----A-DEAVCIGPAPSKKSYLNIPAIISAAEITGA   75 (451)
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhH----C-CEEEEeCCCCcccccCCHHHHHHHHHHhCC
Confidence            689999985 9999999999999999999885543322111111    1 122221       3456666666543  49


Q ss_pred             CEEEEccc
Q psy4233          89 NVVINLIG   96 (303)
Q Consensus        89 D~vi~~a~   96 (303)
                      |+|+-..+
T Consensus        76 d~I~p~~~   83 (451)
T PRK08591         76 DAIHPGYG   83 (451)
T ss_pred             CEEEECCC
Confidence            99887554

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.53  E-value=0.022  Score=49.46  Aligned_cols=103  Identities=17%  Similarity=0.168  Sum_probs=68.4

Q ss_pred             EEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc----CCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          23 VFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC----GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        23 VtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |+|+ |.||+.++..|+..+  .++.+++.+....... ..+.    .....+.+. +  .|    .+.++++|+||.+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence            4575 999999999999887  4788888864322111 1110    000122222 2  22    24678999999999


Q ss_pred             ccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          96 GRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        96 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |..  ....+.+..+.|....+.+++.+++++.+ .++.+|
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            973  22456688899999999999999988755 555555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.52  E-value=0.25  Score=42.52  Aligned_cols=90  Identities=18%  Similarity=0.176  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a   95 (303)
                      ..+|+|.|.||.+|+.+.+.++..|+++++.+. +....+.         +.    .+.-..++.++-+.  +|.++-+.
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~-p~~~~~~---------v~----G~~~y~sv~dlp~~~~~Dlavi~v   71 (286)
T TIGR01019         6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVT-PGKGGTT---------VL----GLPVFDSVKEAVEETGANASVIFV   71 (286)
T ss_pred             CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEEC-CCCCcce---------ec----CeeccCCHHHHhhccCCCEEEEec
Confidence            458999999999999999999999988555443 2211111         11    11222333333333  79888776


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      ...              ....+++.|.+.|++.+|.+|+.
T Consensus        72 pa~--------------~v~~~l~e~~~~Gvk~avIis~G   97 (286)
T TIGR01019        72 PAP--------------FAADAIFEAIDAGIELIVCITEG   97 (286)
T ss_pred             CHH--------------HHHHHHHHHHHCCCCEEEEECCC
Confidence            532              12256777777899888877755

ATP citrate lyases appear to form an outgroup.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.51  E-value=0.0092  Score=51.31  Aligned_cols=58  Identities=17%  Similarity=0.311  Sum_probs=48.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++.+++|.|+|.+|.+|..++..|+++|+.|++..|...                          ++.+..+++|+||-+
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------------~l~e~~~~ADIVIsa  209 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------------DAKALCRQADIVVAA  209 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------------------CHHHHHhcCCEEEEe
Confidence            467899999999999999999999999999999866531                          245566789999998


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .|..
T Consensus       210 vg~~  213 (301)
T PRK14194        210 VGRP  213 (301)
T ss_pred             cCCh
Confidence            8864

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.51  E-value=0.0075  Score=49.08  Aligned_cols=38  Identities=26%  Similarity=0.441  Sum_probs=33.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .++.+|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4577899999997 8999999999999999999887764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=96.51  E-value=0.022  Score=52.52  Aligned_cols=73  Identities=11%  Similarity=-0.085  Sum_probs=47.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhc--cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIK--YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~   88 (303)
                      ++||||.|+ |.++..+++++.+.|++|++++..........+.    . -+.+..       +..|.+.+.++.+  ++
T Consensus         2 ~kkili~g~-g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~----a-D~~~~~~~~~~~~~y~d~~~l~~~a~~~~i   75 (449)
T TIGR00514         2 LDKILIANR-GEIALRILRACKELGIKTVAVHSTADRDALHVLL----A-DEAVCIGPAPSAKSYLNIPNIISAAEITGA   75 (449)
T ss_pred             cceEEEeCC-CHHHHHHHHHHHHcCCeEEEEEChhhhccccccc----C-CEEEEcCCCCchhchhCHHHHHHHHHHhCC
Confidence            679999985 9999999999999999999986543222111111    1 122221       3445555665443  49


Q ss_pred             CEEEEccc
Q psy4233          89 NVVINLIG   96 (303)
Q Consensus        89 D~vi~~a~   96 (303)
                      |+|+-..+
T Consensus        76 d~I~pg~g   83 (449)
T TIGR00514        76 DAIHPGYG   83 (449)
T ss_pred             CEEEeCCC
Confidence            99987654

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.51  E-value=0.0081  Score=44.25  Aligned_cols=85  Identities=12%  Similarity=0.102  Sum_probs=49.1

Q ss_pred             cEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ++|+|+|++   +..|..+++.|.++|++|+.+.-... .....+          ..-++.      +.-..+|.++.+.
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~-~i~G~~----------~y~sl~------e~p~~iDlavv~~   63 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGG-EILGIK----------CYPSLA------EIPEPIDLAVVCV   63 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCS-EETTEE-----------BSSGG------GCSST-SEEEE-S
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCce-EECcEE----------eecccc------CCCCCCCEEEEEc
Confidence            579999998   77999999999999999998755432 111111          111121      1113478887776


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ...              .+..+++.+.+.|++.+++.++
T Consensus        64 ~~~--------------~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   64 PPD--------------KVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             -HH--------------HHHHHHHHHHHHT-SEEEE-TT
T ss_pred             CHH--------------HHHHHHHHHHHcCCCEEEEEcc
Confidence            432              2235778888888888888876

>PRK08462 biotin carboxylase; Validated

Probab=96.50  E-value=0.026  Score=51.98  Aligned_cols=93  Identities=14%  Similarity=0.056  Sum_probs=60.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhcc--c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIKY--S   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~--~   88 (303)
                      ++||||.|+ |.++..+++++.+.|++|+++....+.........     -+.+..       +..|.+.+.++.+.  +
T Consensus         4 ~k~ili~~~-g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~~a-----d~~~~~~~~~~~~~y~~~~~l~~~~~~~~~   77 (445)
T PRK08462          4 IKRILIANR-GEIALRAIRTIQEMGKEAIAIYSTADKDALYLKYA-----DAKICIGGAKSSESYLNIPAIISAAEIFEA   77 (445)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEechhhcCCchhhhC-----CEEEEeCCCchhcccCCHHHHHHHHHHcCC
Confidence            679999996 99999999999999999998876544322222211     122222       55666777766554  8


Q ss_pred             CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      |+|+-..+.....             ..+.+.++..|+ +++
T Consensus        78 D~i~pg~g~lse~-------------~~~a~~~e~~Gi-~~~  105 (445)
T PRK08462         78 DAIFPGYGFLSEN-------------QNFVEICSHHNI-KFI  105 (445)
T ss_pred             CEEEECCCccccC-------------HHHHHHHHHCCC-eEE
Confidence            9998876532111             135666777776 444

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.50  E-value=0.029  Score=51.68  Aligned_cols=76  Identities=14%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +.+++|+|+|+ |..|..+++.|.++|++|.+.+...... .+.+..  ...++.+..++..+ .    .+.++|.||..
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~--~~~gi~~~~g~~~~-~----~~~~~d~vv~s   74 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK--MFDGLVFYTGRLKD-A----LDNGFDILALS   74 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh--ccCCcEEEeCCCCH-H----HHhCCCEEEEC
Confidence            45789999997 6899999999999999999988754321 111111  01256666665321 1    34679999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      .|...
T Consensus        75 pgi~~   79 (445)
T PRK04308         75 PGISE   79 (445)
T ss_pred             CCCCC
Confidence            98753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.48  E-value=0.054  Score=44.05  Aligned_cols=77  Identities=16%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecC---CCccccc------c------------hhcCCCCceEEEec
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRG---NFYDVRD------L------------RLCGDLGQVLFQPY   73 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~---~~~~~~~------~------------~~~~~~~~~~~~~~   73 (303)
                      +...+|+|.|+ |.+|+.++..|.+.|. +++++++.   .......      .            ......-+++.+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            35679999997 8899999999999996 68888776   2111110      0            00000123455555


Q ss_pred             CCCCHHHHHHHhcccCEEEEc
Q psy4233          74 HPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        74 Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++ +.+.+.+.++++|+||.+
T Consensus        98 ~i-~~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KI-TEENIDKFFKDADIVCEA  117 (200)
T ss_pred             eC-CHhHHHHHhcCCCEEEEC
Confidence            65 456677888999999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.46  E-value=0.036  Score=50.09  Aligned_cols=107  Identities=12%  Similarity=0.048  Sum_probs=65.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--------------------hcCCCCc--eEEEec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQPY   73 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~~   73 (303)
                      ...+|+|+|+ |-+|+.++..|...|. ++++++...-+....-+                    +...-+.  ++.+..
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            4568999996 9999999999999994 56666543211111000                    0000122  444555


Q ss_pred             CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      .++ .+...++++++|+||.+...             ...-..+-++|.+.++ .+|+.+..+.++
T Consensus       120 ~i~-~~~~~~~~~~~D~Vvd~~d~-------------~~~r~~ln~~~~~~~~-p~v~~~~~g~~G  170 (392)
T PRK07878        120 RLD-PSNAVELFSQYDLILDGTDN-------------FATRYLVNDAAVLAGK-PYVWGSIYRFEG  170 (392)
T ss_pred             cCC-hhHHHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            553 44567788999999988632             1112236677888776 677776655544

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.45  E-value=0.021  Score=49.40  Aligned_cols=93  Identities=17%  Similarity=0.118  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ..++|.| ||||-+|+.+++.|-++++.   ++++.....+..+.+...+  ..+++.  ++.+.     .|+++|+++.
T Consensus         2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~g--~~~~V~--~l~~~-----~f~~vDia~f   71 (322)
T PRK06901          2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFNN--KAVEQI--APEEV-----EWADFNYVFF   71 (322)
T ss_pred             CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEECC--EEEEEE--ECCcc-----CcccCCEEEE
Confidence            4568999 99999999999999998854   4455433122212222111  122222  33222     2478999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                       +|..              ..+.....+.++|+ .+|=-||.
T Consensus        72 -ag~~--------------~s~~~ap~a~~aG~-~VIDnSsa   97 (322)
T PRK06901         72 -AGKM--------------AQAEHLAQAAEAGC-IVIDLYGI   97 (322)
T ss_pred             -cCHH--------------HHHHHHHHHHHCCC-EEEECChH
Confidence             7642              12345666777776 44433433

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.45  E-value=0.045  Score=45.62  Aligned_cols=105  Identities=12%  Similarity=0.065  Sum_probs=64.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQPYHPR   76 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~   76 (303)
                      +|+|.|+ |-+|.++++.|...| .++++++...-+....                      +......-+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899995 999999999999999 4566665542211100                      000000123556667765


Q ss_pred             CHHHH-HHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          77 NDDEI-RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        77 d~~~~-~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +..++ ...++++|+||.+...             +..-..+-+.|...++ .+|..++.+-.+
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~Dn-------------~~aR~~ln~~c~~~~i-plI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALDN-------------IIARRYVNGMLIFLIV-PLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcccCCce
Confidence            44333 3567889999988542             2223346677777775 788777665554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.45  E-value=0.022  Score=52.87  Aligned_cols=103  Identities=14%  Similarity=0.069  Sum_probs=64.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-------------HH---H
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-------------DD---E   80 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-------------~~---~   80 (303)
                      .+.+|+|+|+ |-+|...+..+...|.+|+++++++.. .+..+..    +.+++..|..+             .+   .
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~r-le~aesl----GA~~v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEV-AEQVESM----GAEFLELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHc----CCeEEEeccccccccccchhhhcchhHHHH
Confidence            4779999996 999999999999999999999987543 2222222    24433333211             11   1


Q ss_pred             ----HHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          81 ----IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        81 ----~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                          +.+..+++|+||.+++......+..+       ++..++.++..+  .+|.++.
T Consensus       238 ~~~~~~~~~~gaDVVIetag~pg~~aP~li-------t~~~v~~mkpGg--vIVdvg~  286 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIPGKPAPKLI-------TAEMVASMKPGS--VIVDLAA  286 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCCcccCcchH-------HHHHHHhcCCCC--EEEEEcc
Confidence                12223569999999997543333222       234566666544  5887775

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.42  E-value=0.036  Score=49.55  Aligned_cols=106  Identities=13%  Similarity=0.067  Sum_probs=66.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~   72 (303)
                      +...+|+|+|+ |-+|++++..|...| .++++++...-+....                      +......-+++.+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            34668999996 999999999999999 5787776652211110                      00000012245555


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      ..+ +.+...++++++|+||.|...             +..-..+-++|.+.++ .+|+.+..+-
T Consensus       118 ~~i-~~~~~~~~~~~~DlVid~~Dn-------------~~~r~~in~~~~~~~i-P~v~~~~~g~  167 (370)
T PRK05600        118 ERL-TAENAVELLNGVDLVLDGSDS-------------FATKFLVADAAEITGT-PLVWGTVLRF  167 (370)
T ss_pred             eec-CHHHHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence            555 355677788999999998643             1222245667788776 5666655433

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.41  E-value=0.0088  Score=55.77  Aligned_cols=79  Identities=9%  Similarity=-0.022  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-------hcCCCCceEE-EecCCCCHHHHHHHhcccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-------LCGDLGQVLF-QPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~~~~-~~~Dl~d~~~~~~~~~~~D   89 (303)
                      .|+|.|+| +|.+|..++..|++.|++|++.++++........       .......... ..+.+.-.+++.++++++|
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            36899998 5999999999999999999999997543221100       0000000000 0011122234556788999


Q ss_pred             EEEEcccc
Q psy4233          90 VVINLIGR   97 (303)
Q Consensus        90 ~vi~~a~~   97 (303)
                      +||-+...
T Consensus        83 ~Vieavpe   90 (495)
T PRK07531         83 WIQESVPE   90 (495)
T ss_pred             EEEEcCcC
Confidence            99987654

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.41  E-value=0.016  Score=50.69  Aligned_cols=97  Identities=21%  Similarity=0.253  Sum_probs=59.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~D~vi~~a~   96 (303)
                      +.+++|+||+|.+|+.+++.+...|.+|++++++... .+.+...+   ...++  |..+ .+.+... .++|++++++|
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~~---~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g  235 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK-LKILKELG---ADYVI--DGSKFSEDVKKL-GGADVVIELVG  235 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHcC---CcEEE--ecHHHHHHHHhc-cCCCEEEECCC
Confidence            5689999999999999999999999999999876432 22222111   11122  2211 1222222 36999999987


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      ...              ....++.+...+  ++|.+++...
T Consensus       236 ~~~--------------~~~~~~~~~~~g--~~v~~g~~~~  260 (332)
T cd08259         236 SPT--------------IEESLRSLNKGG--RLVLIGNVTP  260 (332)
T ss_pred             hHH--------------HHHHHHHhhcCC--EEEEEcCCCC
Confidence            421              123455554443  6887776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06849 hypothetical protein; Provisional

Probab=96.40  E-value=0.014  Score=52.71  Aligned_cols=37  Identities=14%  Similarity=0.161  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      ++|+|||||+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4789999999999999999999999999999988643

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.39  E-value=0.012  Score=56.22  Aligned_cols=94  Identities=12%  Similarity=0.068  Sum_probs=68.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .++|+|+|. |-+|+.+++.|.++|+++++++.+++ ..+..+.    .+...+.+|.+|++.++++ ++++|++|-+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~-~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDIS-AVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHH-HHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence            458999995 99999999999999999999998754 3333332    3578999999999999875 567999887764


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCc-eEE
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVE-KFI  130 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v  130 (303)
                      ..         +    ....+++.+++...+ +++
T Consensus       474 d~---------~----~n~~i~~~~r~~~p~~~Ii  495 (601)
T PRK03659        474 EP---------E----DTMKIVELCQQHFPHLHIL  495 (601)
T ss_pred             CH---------H----HHHHHHHHHHHHCCCCeEE
Confidence            32         1    122567777776543 443

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.38  E-value=0.016  Score=52.21  Aligned_cols=68  Identities=15%  Similarity=0.170  Sum_probs=52.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      ||+|+|+ |..|..+++++.+.|++|++++.++.......      . -+.+..|..|.+.+.++.+  ++|+|+...
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~------a-d~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV------A-HRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh------C-ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            6899995 99999999999999999999988754322211      1 2456678889999988877  599998653

This enzyme is an alternative to PurN (TIGR00639)

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.38  E-value=0.006  Score=52.07  Aligned_cols=66  Identities=23%  Similarity=0.261  Sum_probs=45.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ++|.++| .|-.|+..+..|++.||+|++.+|++.+..+.+...+    .       .-.++..++.+++|+||-+..
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G----a-------~~a~s~~eaa~~aDvVitmv~   66 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG----A-------TVAASPAEAAAEADVVITMLP   66 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC----C-------cccCCHHHHHHhCCEEEEecC
Confidence            4788898 7999999999999999999999998765433332221    1       112222445556677766654

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.38  E-value=0.0055  Score=52.70  Aligned_cols=71  Identities=15%  Similarity=0.155  Sum_probs=47.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |+.|+|.++| +|.+|+.+++.|++.|    ++|++.+|++.+..+.+...   .+++..    .+   ..++.+++|+|
T Consensus         1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~---~g~~~~----~~---~~e~~~~aDvV   69 (279)
T PRK07679          1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQK---YGVKGT----HN---KKELLTDANIL   69 (279)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHh---cCceEe----CC---HHHHHhcCCEE
Confidence            4457999999 6999999999999987    78999888654333322211   112211    12   23455678999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      |.+.-.
T Consensus        70 ilav~p   75 (279)
T PRK07679         70 FLAMKP   75 (279)
T ss_pred             EEEeCH
Confidence            888754

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.36  E-value=0.011  Score=52.70  Aligned_cols=58  Identities=16%  Similarity=0.143  Sum_probs=43.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ..++|+|+|.+|.+|+.+++.|.+. +++|++.++....                    ..+   ..+.++++|+||-|.
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------------~~~---~~~~v~~aDlVilav   59 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------------SLD---PATLLQRADVLIFSA   59 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------------cCC---HHHHhcCCCEEEEeC
Confidence            4679999999999999999999975 7899998874210                    012   234567788888887


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      ..
T Consensus        60 Pv   61 (370)
T PRK08818         60 PI   61 (370)
T ss_pred             CH
Confidence            64

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.36  E-value=0.025  Score=53.67  Aligned_cols=71  Identities=15%  Similarity=0.184  Sum_probs=55.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++++|+|.|+ |.+|..++.++.+.|++|++++.++......+       --+.+.+|..|.+.+.++.+++|+|...
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~-------AD~~~v~~~~D~~~l~~~a~~~dvIt~e   90 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSV-------AARHVVGSFDDRAAVREFAKRCDVLTVE   90 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-------CceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence            56789999997 89999999999999999999988654221111       1235568889999998888889988543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.35  E-value=0.0046  Score=53.44  Aligned_cols=35  Identities=23%  Similarity=0.156  Sum_probs=31.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ++|.|+|+ |.+|..++..|++.|++|++.++++..
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            58999997 999999999999999999999997543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.34  E-value=0.03  Score=43.62  Aligned_cols=59  Identities=19%  Similarity=0.348  Sum_probs=43.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +..+++++|+|.++.+|..++..|.++|..|+......                          .++.+..+++|+||-+
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T--------------------------~~l~~~~~~ADIVVsa   86 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT--------------------------KNLQEITRRADIVVSA   86 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS--------------------------SSHHHHHTTSSEEEE-
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC--------------------------CcccceeeeccEEeee
Confidence            46789999999999999999999999999998865542                          1244566789999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      +|...
T Consensus        87 ~G~~~   91 (160)
T PF02882_consen   87 VGKPN   91 (160)
T ss_dssp             SSSTT
T ss_pred             ecccc
Confidence            88643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.34  E-value=0.014  Score=52.13  Aligned_cols=64  Identities=13%  Similarity=0.175  Sum_probs=46.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...+++|.|+|. |.||+.+++.|..-|.+|++.++....  ..               +.....+++++++++|+|+..
T Consensus       113 ~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~--~~---------------~~~~~~~L~ell~~sDiI~lh  174 (378)
T PRK15438        113 SLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRAD--RG---------------DEGDFRSLDELVQEADILTFH  174 (378)
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccc--cc---------------cccccCCHHHHHhhCCEEEEe
Confidence            567899999995 999999999999999999998753211  00               001233577788889988855


Q ss_pred             cc
Q psy4233          95 IG   96 (303)
Q Consensus        95 a~   96 (303)
                      ..
T Consensus       175 ~P  176 (378)
T PRK15438        175 TP  176 (378)
T ss_pred             CC
Confidence            44

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.33  E-value=0.0082  Score=42.43  Aligned_cols=67  Identities=27%  Similarity=0.298  Sum_probs=43.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC---CeEEEe-ecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG---SQIIIP-YRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~-~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ||.|+| +|.+|+++++.|++.|   ++|+.. +|++.+..+..+..+    +....      .+..++++.+|+||.+.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~----~~~~~------~~~~~~~~~advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG----VQATA------DDNEEAAQEADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT----TEEES------EEHHHHHHHTSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc----ccccc------CChHHhhccCCEEEEEE
Confidence            678886 6999999999999999   999966 676443322212211    11111      12445666899999987


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      -+
T Consensus        70 ~p   71 (96)
T PF03807_consen   70 KP   71 (96)
T ss_dssp             -G
T ss_pred             CH
Confidence            54

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.31  E-value=0.056  Score=46.12  Aligned_cols=33  Identities=27%  Similarity=0.407  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeec
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYR   50 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R   50 (303)
                      |+||.|+|++|.+|+.+++.+.+. +.++.++..
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            369999999999999999999974 688777654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.31  E-value=0.016  Score=49.82  Aligned_cols=57  Identities=19%  Similarity=0.401  Sum_probs=47.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++.+++|+|.|-+|.+|..++..|+++|+.|++.. |+.                        +   +.++.+.+|+||-
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~------------------------~---l~e~~~~ADIVIs  207 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR------------------------D---LPAVCRRADILVA  207 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC------------------------C---HHHHHhcCCEEEE
Confidence            46799999999999999999999999999999984 432                        1   3556678999998


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +.+..
T Consensus       208 avg~~  212 (296)
T PRK14188        208 AVGRP  212 (296)
T ss_pred             ecCCh
Confidence            88764

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.31  E-value=0.014  Score=49.65  Aligned_cols=69  Identities=13%  Similarity=0.149  Sum_probs=55.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      ..||++.| +|=+|..++-++.+.|.+|++++|......-...       -..+..|..|.+.+..+++.  +|+||--
T Consensus        12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------hrs~Vi~MlD~~al~avv~rekPd~IVpE   82 (394)
T COG0027          12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------HRSYVIDMLDGDALRAVVEREKPDYIVPE   82 (394)
T ss_pred             CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------hheeeeeccCHHHHHHHHHhhCCCeeeeh
Confidence            45899999 6999999999999999999999998654332221       23466788999999998875  9998844

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.30  E-value=0.0051  Score=54.02  Aligned_cols=77  Identities=16%  Similarity=0.248  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----CceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ||+|.|.|+ |.+|..++..|.+.|++|++++|++.. .+.+...+..    ++... ........+..+.++++|+||-
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~   77 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQ-AAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV   77 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence            479999995 999999999999999999999996432 2222211100    00000 0011112234456678999998


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus        78 ~v~~   81 (325)
T PRK00094         78 AVPS   81 (325)
T ss_pred             eCCH
Confidence            8764

>PRK07877 hypothetical protein; Provisional

Probab=96.29  E-value=0.058  Score=52.26  Aligned_cols=103  Identities=10%  Similarity=0.128  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCc--ccccc-------------------hhcCCCCceEEEec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFY--DVRDL-------------------RLCGDLGQVLFQPY   73 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~--~~~~~-------------------~~~~~~~~~~~~~~   73 (303)
                      ...+|+|+|+ | +|+.++..|...|.  ++++++...-+  +....                   ......-+++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4679999999 8 99999999999983  77776554211  11110                   00000123566666


Q ss_pred             CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      .++ .+.+.++++++|+||.|.-.             +..-..+-++|.+.++ .+|+-++..
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D~-------------~~~R~~ln~~a~~~~i-P~i~~~~~~  231 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECDS-------------LDVKVLLREAARARRI-PVLMATSDR  231 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            664 77888999999999999642             2222245678888886 777766543

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.29  E-value=0.011  Score=54.65  Aligned_cols=80  Identities=9%  Similarity=0.022  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcC---CCCceE-EE---ec-CCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCG---DLGQVL-FQ---PY-HPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~---~~~~~~-~~---~~-Dl~d~~~~~~~~~~   87 (303)
                      ||+|.|.| +|++|..++-.|.+.|  ++|++++.+... .+.+..-.   ..++.+ ++   .+ .+.-..++.+.+++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~-v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPR-IDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHH-HHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            57999998 5999999999999885  889999886433 22211100   000100 00   01 12112334556788


Q ss_pred             cCEEEEccccCc
Q psy4233          88 SNVVINLIGREF   99 (303)
Q Consensus        88 ~D~vi~~a~~~~   99 (303)
                      +|++|-|.+.+.
T Consensus        79 advi~I~V~TP~   90 (473)
T PLN02353         79 ADIVFVSVNTPT   90 (473)
T ss_pred             CCEEEEEeCCCC
Confidence            999999988654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.29  E-value=0.016  Score=55.02  Aligned_cols=72  Identities=21%  Similarity=0.209  Sum_probs=56.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .+|+|+|. |.+|++++++|.++|++|++++.+++. .+..+.    .+...+.+|.+|++.++++ ++++|+++-+.+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~-~~~~~~----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTR-VDELRE----RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHH-HHHHHH----CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            47899995 999999999999999999999987533 333332    3588999999999998864 456898876654

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.29  E-value=0.035  Score=45.75  Aligned_cols=110  Identities=16%  Similarity=0.157  Sum_probs=69.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCC-------CcccccchhcC-------------CCCceEEEec-C
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGN-------FYDVRDLRLCG-------------DLGQVLFQPY-H   74 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~-------~~~~~~~~~~~-------------~~~~~~~~~~-D   74 (303)
                      +..+|+|+|. |.+|+..+.+|.+.| .++++++-..       ........-.+             --|..++-.. |
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            4568999996 999999999999999 4565554322       11111111011             0134444443 4


Q ss_pred             CCCHHHHHHHhcc-cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233          75 PRNDDEIRKAIKY-SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT  143 (303)
Q Consensus        75 l~d~~~~~~~~~~-~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~  143 (303)
                      +-+++.+.+++.+ +|+||.+.-.             +..-..|+..|++.+. ++|  ||+++-+..++
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~-------------v~~Kv~Li~~c~~~ki-~vI--ss~Gag~k~DP  161 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDS-------------VRAKVALIAYCRRNKI-PVI--SSMGAGGKLDP  161 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhh-------------hHHHHHHHHHHHHcCC-CEE--eeccccCCCCC
Confidence            5577888887765 9999998642             3334479999999876 444  77777665444

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.27  E-value=0.0055  Score=52.80  Aligned_cols=37  Identities=19%  Similarity=0.196  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ++++|.|+|+ |.+|..++..|+..|++|+++++++..
T Consensus         2 ~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~   38 (282)
T PRK05808          2 GIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAA   38 (282)
T ss_pred             CccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHH
Confidence            4568999996 999999999999999999999887543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.26  E-value=0.019  Score=50.18  Aligned_cols=68  Identities=19%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.+++|.|.| .|.||+.+++.|..-|.+|++.+|..... .         +++..    ...+++.++++++|+|+.+
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-~---------~~~~~----~~~~~l~e~l~~aDvvv~~  197 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-P---------GVQSF----AGREELSAFLSQTRVLINL  197 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-C---------Cceee----cccccHHHHHhcCCEEEEC
Confidence            45688999999 69999999999999999999998854321 1         11111    1345788899999999988


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      ...
T Consensus       198 lPl  200 (312)
T PRK15469        198 LPN  200 (312)
T ss_pred             CCC
Confidence            764

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.23  E-value=0.012  Score=50.38  Aligned_cols=106  Identities=18%  Similarity=0.207  Sum_probs=63.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .++++++|.|| |..+++++-+|++.| .+++++.|+.....+.......... ..-..+..+.+...    ..|.|||+
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAALADLEGLE----EADLLINA  197 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccccc----ccCEEEEC
Confidence            34689999997 899999999999999 6799999976544333222221111 11111122222111    68999999


Q ss_pred             cccCcccc-------------chhhhhhhcch-HHHHHHHHHhcCCc
Q psy4233          95 IGREFATK-------------NFTIADANVEI-PARLARLSKEMGVE  127 (303)
Q Consensus        95 a~~~~~~~-------------~~~~~~~n~~~-~~~l~~~~~~~~~~  127 (303)
                      .+......             ....++++... .-.+++.|++.|.+
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            87532211             11233444442 33588888888874

>KOG1202|consensus

Probab=96.23  E-value=0.028  Score=56.02  Aligned_cols=160  Identities=16%  Similarity=0.128  Sum_probs=99.3

Q ss_pred             CCcccCC-CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc---cccchhcCC-CCceEEEecCCCCHHHHHHH
Q psy4233          11 GGRSSFN-GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD---VRDLRLCGD-LGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        11 ~~~~~~~-~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      .+|+-+. -+..+|+||-|..|-+++..|+.+|. +.++.+|+.-.-   ......|.. --++.+-..|++..+.-..+
T Consensus      1760 I~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~L 1839 (2376)
T KOG1202|consen 1760 IPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGL 1839 (2376)
T ss_pred             cchhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHH
Confidence            4444443 45799999999999999999999995 455666654221   111112211 11133333455555555555


Q ss_pred             hcc------cCEEEEcccc-----Cccccch---hhhhhhcchHHHHHHHHHhcC--CceEEEEecCcc-CCCCCCCCCC
Q psy4233          85 IKY------SNVVINLIGR-----EFATKNF---TIADANVEIPARLARLSKEMG--VEKFIHISALNA-DPNPPTYYIS  147 (303)
Q Consensus        85 ~~~------~D~vi~~a~~-----~~~~~~~---~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~-~~~~~~~~~~  147 (303)
                      ++.      +--|||+|..     ...+.++   +.-+..+.++.+|=+..++.-  .+.||.+||.+. .+.      .
T Consensus      1840 i~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN------~ 1913 (2376)
T KOG1202|consen 1840 IEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN------A 1913 (2376)
T ss_pred             HHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC------C
Confidence            543      5678888875     1223332   333445667777777777764  468888888866 343      3


Q ss_pred             CCCchhHHHHHHHHHHHhh---CCCEEEEeec
Q psy4233         148 GGSQFYRTKYQGEKEVLRE---FPEATIFRPS  176 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~  176 (303)
                      ..+.|+.+....|+++..-   |+|-+.+.=|
T Consensus      1914 GQtNYG~aNS~MERiceqRr~~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1914 GQTNYGLANSAMERICEQRRHEGFPGTAIQWG 1945 (2376)
T ss_pred             cccccchhhHHHHHHHHHhhhcCCCcceeeee
Confidence            4578999999999999763   6665555443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.20  E-value=0.013  Score=50.45  Aligned_cols=78  Identities=19%  Similarity=0.166  Sum_probs=50.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...++++|.|+ |..|+.++.+|.+.|. +|+++.|+..+.............+  ..  +...+++...+.++|+||++
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~--~~--~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI--TR--LEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcc--ee--ccchhhhhhcccCCCEEEEC
Confidence            45779999996 9999999999999995 7999999754332221111110111  11  11223344556779999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus       198 Tp~g  201 (282)
T TIGR01809       198 VPAD  201 (282)
T ss_pred             CCCC
Confidence            8764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.19  E-value=0.054  Score=44.56  Aligned_cols=105  Identities=16%  Similarity=0.166  Sum_probs=68.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-------------chhcCCCCceEEEe---cCCCC--HHH
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-------------LRLCGDLGQVLFQP---YHPRN--DDE   80 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~~~~~~~---~Dl~d--~~~   80 (303)
                      |++.++| -|.+|..+++.|++.||+|++.++++....+.             +......|++.++-   +|+++  .++
T Consensus         1 M~iGmiG-LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~   79 (300)
T COG1023           1 MQIGMIG-LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDD   79 (300)
T ss_pred             Ccceeec-cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHH
Confidence            5778888 69999999999999999999999975432111             11112236666654   45554  355


Q ss_pred             HHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        81 ~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      +...+..-|+||.-....            +.-+.+-.+.+.+.++ +|+=++|.+.
T Consensus        80 la~~L~~GDivIDGGNS~------------y~Ds~rr~~~l~~kgi-~flD~GTSGG  123 (300)
T COG1023          80 LAPLLSAGDIVIDGGNSN------------YKDSLRRAKLLAEKGI-HFLDVGTSGG  123 (300)
T ss_pred             HHhhcCCCCEEEECCccc------------hHHHHHHHHHHHhcCC-eEEeccCCCC
Confidence            666777789998764332            2222345566677787 8887777654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.19  E-value=0.03  Score=42.65  Aligned_cols=58  Identities=19%  Similarity=0.273  Sum_probs=48.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++.+++|+|.|.+.-+|..++..|.++|..|+...++..                          ++.+..+++|+||-.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~--------------------------~l~~~v~~ADIVvsA   78 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------------------QLQSKVHDADVVVVG   78 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------------------CHHHHHhhCCEEEEe
Confidence            567999999999999999999999999999998865421                          244567889999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .|..
T Consensus        79 tg~~   82 (140)
T cd05212          79 SPKP   82 (140)
T ss_pred             cCCC
Confidence            8865

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=96.19  E-value=0.041  Score=50.13  Aligned_cols=78  Identities=15%  Similarity=0.063  Sum_probs=55.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ..+|+|+|.| -|--|..+++.|.++|++|++.+.++...... ......+++++..+...+     ..+..+|.||-..
T Consensus         5 ~~~~kv~V~G-LG~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~-~~~~~~~~i~~~~g~~~~-----~~~~~~d~vV~SP   77 (448)
T COG0771           5 FQGKKVLVLG-LGKSGLAAARFLLKLGAEVTVSDDRPAPEGLA-AQPLLLEGIEVELGSHDD-----EDLAEFDLVVKSP   77 (448)
T ss_pred             ccCCEEEEEe-cccccHHHHHHHHHCCCeEEEEcCCCCccchh-hhhhhccCceeecCccch-----hccccCCEEEECC
Confidence            4588999999 59999999999999999999998665441111 111122457777766544     2345799999999


Q ss_pred             ccCcc
Q psy4233          96 GREFA  100 (303)
Q Consensus        96 ~~~~~  100 (303)
                      |....
T Consensus        78 Gi~~~   82 (448)
T COG0771          78 GIPPT   82 (448)
T ss_pred             CCCCC
Confidence            87543

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.19  E-value=0.0093  Score=51.62  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      .++|.|+|+ |.+|..++..|+..|++|++.++++..
T Consensus         3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   38 (291)
T PRK06035          3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEI   38 (291)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            468999996 999999999999999999999987543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.19  E-value=0.0043  Score=49.00  Aligned_cols=85  Identities=14%  Similarity=0.053  Sum_probs=52.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC-------------------C
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP-------------------R   76 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------~   76 (303)
                      ..+.+|+|+| +|.+|...++.|...|++|+.++...... .....    .....+..+.                   .
T Consensus        18 ~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~-~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~   91 (168)
T PF01262_consen   18 VPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERL-RQLES----LGAYFIEVDYEDHLERKDFDKADYYEHPES   91 (168)
T ss_dssp             E-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHH-HHHHH----TTTEESEETTTTTTTSB-CCHHHCHHHCCH
T ss_pred             CCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHH-Hhhhc----ccCceEEEcccccccccccchhhhhHHHHH
Confidence            4577999999 59999999999999999999998864322 21111    1122222221                   1


Q ss_pred             CHHHHHHHhcccCEEEEccccCccccchhh
Q psy4233          77 NDDEIRKAIKYSNVVINLIGREFATKNFTI  106 (303)
Q Consensus        77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~  106 (303)
                      ....+.+.++.+|.||.++-.+....|...
T Consensus        92 ~~~~f~~~i~~~d~vI~~~~~~~~~~P~lv  121 (168)
T PF01262_consen   92 YESNFAEFIAPADIVIGNGLYWGKRAPRLV  121 (168)
T ss_dssp             HHHHHHHHHHH-SEEEEHHHBTTSS---SB
T ss_pred             hHHHHHHHHhhCcEEeeecccCCCCCCEEE
Confidence            234566667778999988877766666444

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.18  E-value=0.0051  Score=48.01  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=46.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC----CCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ||.|.|| |-.|.+++..|.++|++|++..|+.. ..+.+....    ..++++.-. .+.-.+++.++++++|+||.+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~-~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEE-QIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHH-HHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHH-HHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEecc
Confidence            7899996 99999999999999999999999752 222222111    012221111 1112244667889999998776


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      ..
T Consensus        78 Ps   79 (157)
T PF01210_consen   78 PS   79 (157)
T ss_dssp             -G
T ss_pred             cH
Confidence            54

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.17  E-value=0.0096  Score=51.64  Aligned_cols=66  Identities=15%  Similarity=0.218  Sum_probs=45.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +|+|.|+| .|.+|+.+++.|.+.|++|++.+|++... +.+...    ++.       ..+++.++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~-~~~~~~----g~~-------~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAV-AEVIAA----GAE-------TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHC----CCe-------ecCCHHHHHhcCCEEEEeCC
Confidence            46899999 59999999999999999999998875332 211111    111       11223445677898888765

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.17  E-value=0.016  Score=52.03  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=56.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...+++||+|| |-+|.-+++.|.++| .+|+++.|......+.-...         .+.....+++...+..+|+||.+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~---------~~~~~~l~el~~~l~~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL---------GAEAVALEELLEALAEADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh---------CCeeecHHHHHHhhhhCCEEEEe
Confidence            45778999997 999999999999999 77888888754333222111         14445667788889999999999


Q ss_pred             cccCcc
Q psy4233          95 IGREFA  100 (303)
Q Consensus        95 a~~~~~  100 (303)
                      .+...+
T Consensus       246 Tsa~~~  251 (414)
T COG0373         246 TSAPHP  251 (414)
T ss_pred             cCCCcc
Confidence            886544

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.16  E-value=0.013  Score=51.57  Aligned_cols=66  Identities=15%  Similarity=0.220  Sum_probs=49.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.+|+|.|+|. |.||+.+++.|...|++|++.+|+......         .+       .-.+++.++++++|+|+.+
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~---------~~-------~~~~~l~ell~~aDiVil~  205 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD---------FL-------TYKDSVKEAIKDADIISLH  205 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh---------hh-------hccCCHHHHHhcCCEEEEe
Confidence            467889999995 999999999999999999999987532110         01       1123467788999998877


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      ...
T Consensus       206 lP~  208 (330)
T PRK12480        206 VPA  208 (330)
T ss_pred             CCC
Confidence            653

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.15  E-value=0.0094  Score=54.37  Aligned_cols=78  Identities=21%  Similarity=0.196  Sum_probs=47.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEE-----E-ecCCCCHHHHHHHhcccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF-----Q-PYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~-----~-~~Dl~d~~~~~~~~~~~D~   90 (303)
                      .+|+|.|+| .|++|..++..|.+ |++|+++++++.. .+.+. .+..+-.|.     . .+.+.-... .+.++++|+
T Consensus         5 ~~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~-ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~-~~~~~~adv   79 (425)
T PRK15182          5 DEVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKR-ILELK-NGVDVNLETTEEELREARYLKFTSE-IEKIKECNF   79 (425)
T ss_pred             CCCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHH-HHHHH-CcCCCCCCCCHHHHHhhCCeeEEeC-HHHHcCCCE
Confidence            357999998 79999999999776 6999999997543 33322 111100000     0 011110111 124678999


Q ss_pred             EEEccccCc
Q psy4233          91 VINLIGREF   99 (303)
Q Consensus        91 vi~~a~~~~   99 (303)
                      +|-|.+...
T Consensus        80 vii~Vptp~   88 (425)
T PRK15182         80 YIITVPTPI   88 (425)
T ss_pred             EEEEcCCCC
Confidence            999988653

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.15  E-value=0.016  Score=49.40  Aligned_cols=69  Identities=12%  Similarity=0.131  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ||+|.|+| .|.+|+.+++.+.+.  +.++.++.....+..+.+...   .+..       ..+++.+++.++|+|+.|+
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~---~~~~-------~~~~~~ell~~~DvVvi~a   69 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK---TGAK-------ACLSIDELVEDVDLVVECA   69 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh---cCCe-------eECCHHHHhcCCCEEEEcC
Confidence            47999999 599999999999986  466555443333222221110   0111       1123444557799999997


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      +.
T Consensus        70 ~~   71 (265)
T PRK13304         70 SV   71 (265)
T ss_pred             Ch
Confidence            64

>PRK05678 succinyl-CoA synthetase subunit alpha; Validated

Probab=96.14  E-value=0.31  Score=42.05  Aligned_cols=88  Identities=14%  Similarity=0.142  Sum_probs=56.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC--CcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN--FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~   93 (303)
                      ..||+|.|.||-+|+.+++.|++-|++++..+...  ......                +.-..++.++-..  +|.++-
T Consensus         8 ~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~v~G----------------~~~y~sv~dlp~~~~~DlAvi   71 (291)
T PRK05678          8 DTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTVLG----------------LPVFNTVAEAVEATGANASVI   71 (291)
T ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCCEEEEECCCCCCCeEeC----------------eeccCCHHHHhhccCCCEEEE
Confidence            45899999999999999999999888644333322  111111                1223334444344  898887


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +....              ....+++.|.+.|++.+|.+|+.
T Consensus        72 ~vp~~--------------~v~~~l~e~~~~gvk~avI~s~G   99 (291)
T PRK05678         72 YVPPP--------------FAADAILEAIDAGIDLIVCITEG   99 (291)
T ss_pred             EcCHH--------------HHHHHHHHHHHCCCCEEEEECCC
Confidence            76532              12256777777899888877765

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.12  E-value=0.042  Score=50.82  Aligned_cols=76  Identities=13%  Similarity=-0.016  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .+++|+|+|. |..|..+++.|.+.|++|++.++++..............++.++.++.. ++    .+.++|.||...|
T Consensus        13 ~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~dlVV~Spg   86 (458)
T PRK01710         13 KNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENY-LD----KLDGFDVIFKTPS   86 (458)
T ss_pred             cCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCC-hH----HhccCCEEEECCC
Confidence            4679999995 9999999999999999999998865322111000001124666665432 22    2467999999987


Q ss_pred             cC
Q psy4233          97 RE   98 (303)
Q Consensus        97 ~~   98 (303)
                      ..
T Consensus        87 i~   88 (458)
T PRK01710         87 MR   88 (458)
T ss_pred             CC
Confidence            64

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.11  E-value=0.014  Score=50.95  Aligned_cols=35  Identities=23%  Similarity=0.256  Sum_probs=31.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .++|.|+|+ |.+|..++..|++.|++|++++++..
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~   38 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEG   38 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            468999996 99999999999999999999998654

>KOG1198|consensus

Probab=96.11  E-value=0.02  Score=50.65  Aligned_cols=75  Identities=16%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~v   91 (303)
                      .+++|||.||+|-+|+..++.+...| ..|++ +++. +..+..+..+   -.+  ..|..+++..+...+    ++|+|
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t-~~s~-e~~~l~k~lG---Ad~--vvdy~~~~~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVT-ACSK-EKLELVKKLG---ADE--VVDYKDENVVELIKKYTGKGVDVV  229 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEE-Eccc-chHHHHHHcC---CcE--eecCCCHHHHHHHHhhcCCCccEE
Confidence            46799999999999999999999999 45554 4432 2223323222   122  345556554444444    49999


Q ss_pred             EEccccC
Q psy4233          92 INLIGRE   98 (303)
Q Consensus        92 i~~a~~~   98 (303)
                      ++|+|..
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999874

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.11  E-value=0.036  Score=51.25  Aligned_cols=78  Identities=15%  Similarity=0.182  Sum_probs=54.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      +|+|.|+ |-.|...++.|.++|++|.+.+++...............++++..+.-.+.+.+...+.++|.||...|..
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~   79 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIP   79 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCC
Confidence            6899995 88999999999999999999988754332210000001246676665445555556677899999988875

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.11  E-value=0.076  Score=44.09  Aligned_cols=93  Identities=14%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a   95 (303)
                      +|+|+|.|||+- +..|++.|...+..+++.+-..... +....    . ...+.+-.-+.+.+.+.++.  +|.||...
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~-~l~~~----~-~~~~~~G~l~~e~l~~~l~e~~i~llIDAT   74 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGA-KLAEQ----I-GPVRVGGFLGAEGLAAFLREEGIDLLIDAT   74 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccc-cchhc----c-CCeeecCcCCHHHHHHHHHHcCCCEEEECC
Confidence            679999999875 8999999999884444433322211 11111    1 12445556788999998875  99999986


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCce
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEK  128 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  128 (303)
                      -+..           ...+.|.+++|+..|++.
T Consensus        75 HPyA-----------a~iS~Na~~aake~gipy   96 (257)
T COG2099          75 HPYA-----------ARISQNAARAAKETGIPY   96 (257)
T ss_pred             ChHH-----------HHHHHHHHHHHHHhCCcE
Confidence            5431           334668888888888743

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=96.10  E-value=0.059  Score=49.97  Aligned_cols=72  Identities=11%  Similarity=-0.043  Sum_probs=48.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEe-c------CCCCHHHHHHHhcc--
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-Y------HPRNDDEIRKAIKY--   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~------Dl~d~~~~~~~~~~--   87 (303)
                      +++||||.|+ |.++..+++.+.+.|++++++....+........    . -+.+. +      |..|.+.+.++.+.  
T Consensus         4 ~~~~vLi~~~-geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~~----a-D~~~~i~p~~~~~~y~d~~~i~~~a~~~~   77 (467)
T PRK12833          4 RIRKVLVANR-GEIAVRIIRAARELGMRTVAACSDADRDSLAARM----A-DEAVHIGPSHAAKSYLNPAAILAAARQCG   77 (467)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHHcCCeEEEEECCCCCCChhHHh----C-CEEEecCCCCccccccCHHHHHHHHHHhC
Confidence            3679999995 9999999999999999998875533322111111    1 12221 2      56677777777665  


Q ss_pred             cCEEEEc
Q psy4233          88 SNVVINL   94 (303)
Q Consensus        88 ~D~vi~~   94 (303)
                      +|+|+-.
T Consensus        78 ~daI~pg   84 (467)
T PRK12833         78 ADAIHPG   84 (467)
T ss_pred             CCEEEEC
Confidence            6888754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	303
2a35_A	215	1.5 A Crystal Structure Of A Protein Of Unknown Fun		8e-05

>pdb|2A35|A Chain A, 1.5 A Crystal Structure Of A Protein Of Unknown Function Pa4017 From Pseudomonas Aeruginosa Pao1, Possible Epimerase Length = 215

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 25  GASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDL-RLCGDLGQVLFQPYHPRNDDEI 81
           GA+G  G +L +++  + +  ++I P R    +   L    G L ++L     P+ D  I
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELL-----PQLDGSI 66
Query: 82  RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
             A       I   G E A +       + ++P  + + + EMG   ++ +SAL AD   
Sbjct: 67  DTAFCCLGTTIKEAGSEEAFRAV-----DFDLPLAVGKRALEMGARHYLVVSALGADAKS 121
Query: 142 PTYYISGGSQFYRTKYQGEKE-VLRE--FPEATIFRPSDMYGSGDKF 185
             +Y          + +GE E  L+E  +P+ TI RPS ++G  ++F
Sbjct: 122 SIFY---------NRVKGELEQALQEQGWPQLTIARPSLLFGPREEF 159

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	303
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-37
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-30
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-21
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-20
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-17
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-15
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-12
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-11
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	2e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	4e-11
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-10
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-09
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-08
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-08
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	4e-08
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	4e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	8e-08
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	8e-08
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-07
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	4e-07
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	8e-07
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-05
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-05
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-04
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	5e-04

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score =  132 bits (334), Expect = 1e-37
 Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 35/224 (15%)

Query: 21  ATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
             + GA+G  G +L +++  +   +++I P R         RL   +G +          
Sbjct: 8   VLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL--AEHPRLDNPVGPL---------A 56

Query: 79  DEIRKAIKYSNVVINLIGREFATK----NFTIADANVEIPARLARLSKEMGVEKFIHISA 134
           + + +     +     +G           F   D   ++P  + + + EMG   ++ +SA
Sbjct: 57  ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVD--FDLPLAVGKRALEMGARHYLVVSA 114

Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPSDMYGSGDKFLRYYGHMW 193
           L AD     +Y        R K + E+ +    +P+ TI RPS ++G  ++F R    + 
Sbjct: 115 LGADAKSSIFY-------NRVKGELEQALQEQGWPQLTIARPSLLFGPREEF-RLAEILA 166

Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
             + R L    K        +   D+A A+     +     +  
Sbjct: 167 APIARIL--PGKY-----HGIEACDLARALWRLALEEGKGVRFV 203

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score =  114 bits (287), Expect = 1e-30
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 26/224 (11%)

Query: 21  ATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGD-LGQVLFQPYHPRN 77
             + GASG  G  L  ++ +QG  S++ +  R      R L    +    V  +      
Sbjct: 21  VFILGASGETGRVLLKEILEQGLFSKVTLIGR------RKLTFDEEAYKNVNQEVVDFEK 74

Query: 78  DDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
            D+   A +  +V    +G  R  A         + +   + A L+K  G + F  +S+ 
Sbjct: 75  LDDYASAFQGHDVGFCCLGTTRGKAGAE-GFVRVDRDYVLKSAELAKAGGCKHFNLLSSK 133

Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
            AD +    Y+       + K + E +V   +F   ++FRP  +     +  R    + R
Sbjct: 134 GADKSSNFLYL-------QVKGEVEAKVEELKFDRYSVFRPGVLLCDRQES-RPGEWLVR 185

Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG-KIY 237
             F  L             V V  V  A++     P     ++ 
Sbjct: 186 KFFGSLP----DSWASGHSVPVVTVVRAMLNNVVRPRDKQMELL 225

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 36/230 (15%), Positives = 75/230 (32%), Gaps = 42/230 (18%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-------LCGDLGQVLFQPYHP 75
           V GA+G +  YL ++L  +G + +   R N     +LR       +  +L          
Sbjct: 26  VVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPELRERGASDIVVANL---------- 74

Query: 76  RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
             +++   A    + V+   G    T        ++    +  + +++ G+++FI +S++
Sbjct: 75  --EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132

Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS---DMYGSGDKFLRYYGHM 192
                           +   K   + E+ R   + TI RP    +   +G          
Sbjct: 133 GTVDPDQGP--MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTG---------- 180

Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
                            I + +   DVA  I          GK ++ +  
Sbjct: 181 -------KVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG 223

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 87.6 bits (217), Expect = 1e-20
 Identities = 33/254 (12%), Positives = 60/254 (23%), Gaps = 43/254 (16%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII------PYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
           V GASG  G  +  KL +   + +                      GD+           
Sbjct: 9   VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDI----------T 58

Query: 77  NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPA-----------------RLAR 119
           + D I  A +  + ++ L       K                                  
Sbjct: 59  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query: 120 LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
            +K  GV+  + + ++            G       K + E+ +       TI R   + 
Sbjct: 119 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLL 178

Query: 180 GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
                       +      +L             V   DVA   + A    +A  K +  
Sbjct: 179 DKEGGVRE----LLVGKDDELLQTDTK------TVPRADVAEVCIQALLFEEAKNKAFDL 228

Query: 240 VGPKRYLLSELLDW 253
                   +   D+
Sbjct: 229 GSKPEGTSTPTKDF 242

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 29/237 (12%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRL---CGDLGQVLFQPYHPRN 77
           V GA+G +G +    +   G  +++ +R       +  L       ++           +
Sbjct: 18  VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEM----------LD 67

Query: 78  DDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS-- 133
              + +A++  + VI   G       +      + +           +  V + +++   
Sbjct: 68  HAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSA 127

Query: 134 -ALNADPN--------PPTYYISGGSQFYRTKYQGEKEVLREFPE---ATIFRPSDMYGS 181
            A+   P               SG S +   K+  +++   +        I  P  + G 
Sbjct: 128 YAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGE 187

Query: 182 GDKFLRYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
            D      G +   +   ++  Y  G+  +   +   +    ++ A  +    G+ Y
Sbjct: 188 LD-IGPTTGRVITAIGNGEMTHYVAGQRNV---IDAAEAGRGLLMAL-ERGRIGERY 239

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 44/239 (18%), Positives = 80/239 (33%), Gaps = 56/239 (23%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--------------DLRLC-GDLGQ 67
           + GASG++GS L N+   +G           ++V                L++   D+  
Sbjct: 9   LIGASGFVGSALLNEALNRG-----------FEVTAVVRHPEKIKIENEHLKVKKADV-- 55

Query: 68  VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
                    + DE+ +  K ++ VI+         N  I D  +++   +    K+ GV 
Sbjct: 56  --------SSLDEVCEVCKGADAVISAFN--PGWNNPDIYDETIKVYLTIIDGVKKAGVN 105

Query: 128 KFIHIS---ALNADPNPPTYYISGGSQFY--RTKYQGEKEVLREFPEA----TIFRPSDM 178
           +F+ +    +L   P           +      K  GE  +     E       F P+  
Sbjct: 106 RFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAAD 165

Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
              G +  RY     R     + V   G       + V D AAA++   + P    + +
Sbjct: 166 MRPGVRTGRY-----RLGKDDMIVDIVG----NSHISVEDYAAAMIDELEHPKHHQERF 215

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 30/222 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + G++G +G  L   L     QI    R     V  +    ++  V F        +E+ 
Sbjct: 5   IVGSTGRVGKSLLKSLSTTDYQIYAGAR----KVEQVPQYNNVKAVHFD--VDWTPEEMA 58

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD--PN 140
           K +   + +IN+ G    +   ++   ++    +L + +++  V++FI +S + +     
Sbjct: 59  KQLHGMDAIINVSG----SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEK 114

Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
                      +Y  K+  +  + +E   + TI +P  +    +                
Sbjct: 115 WIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTE-EEATGLI----------- 162

Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
                   + +     +GDVA  I        + GK+     
Sbjct: 163 -----DINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHN 199

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 65.7 bits (160), Expect = 2e-12
 Identities = 42/229 (18%), Positives = 74/229 (32%), Gaps = 15/229 (6%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLG-QVLFQPYHPRN 77
           + G +GY+G  + N     G    + +R     N   V+ L     LG +++       +
Sbjct: 9   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD--D 66

Query: 78  DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
              +  A+K  +VVI+ +          +   ++    +L    KE G  K    S    
Sbjct: 67  HQRLVDALKQVDVVISALAG-------GVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGM 119

Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
           DP+   + +  GS  +  K +  + +       T    +   G     L           
Sbjct: 120 DPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR 179

Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
            K+ +Y  G       V   DV    + +  DP    K      P   L
Sbjct: 180 DKVLIYGDGNVKG-IWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNIL 227

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 27/218 (12%), Positives = 59/218 (27%), Gaps = 33/218 (15%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLC-GDLGQVLFQPYHPRN 77
           +FGA+G  G     +  + G ++ +      R      R   +  GD+            
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDV----------LQ 57

Query: 78  DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
             ++ K +   + VI L+G      + +      E    +    K  GV+K +  ++   
Sbjct: 58  AADVDKTVAGQDAVIVLLG---TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL 114

Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
             +P        +       +  K +     +     P    G       Y         
Sbjct: 115 LWDPTKVPPRLQA-VTDDHIRMHKVLRESGLKYVAVMPP-HIGDQPLTGAY--------- 163

Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK 235
                         + +   D+   ++      +  G 
Sbjct: 164 ----TVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGH 197

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 47/258 (18%), Positives = 79/258 (30%), Gaps = 77/258 (29%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQII-IPYRGNFYDVRDLRLCGDLGQV--LFQPYHPRNDD 79
           V GA+G +G  +  +  +     +   +R        + L  D   V  +   + P    
Sbjct: 7   VTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLL-DSNAVHHIIHDFQP---- 61

Query: 80  EIRKAIKYSNVVIN--------LIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFI 130
                    +V+++        +            A   NV+    LA+ +  +G    I
Sbjct: 62  ---------HVIVHCAAERRPDV-----VENQPDAASQLNVDASGNLAKEAAAVGA-FLI 106

Query: 131 HIS------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
           +IS                 P P   Y   G    +TK  GEK VL     A + R   +
Sbjct: 107 YISSDYVFDGTNPPYREEDIPAPLNLY---G----KTKLDGEKAVLENNLGAAVLRIPIL 159

Query: 179 YGSGDK----FLRYYGHMWRHVFRKLAVYKKGEETIK-------QPVYVGDVAAAIVAAC 227
           YG  +K     +         +F K+       ++          P +V DVA       
Sbjct: 160 YGEVEKLEESAVTV-------MFDKVQ---FSNKSANMDHWQQRFPTHVKDVATVCRQLA 209

Query: 228 K----DPDAAGKIYQAVG 241
           +    DP   G  +   G
Sbjct: 210 EKRMLDPSIKG-TFHWSG 226

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 61.1 bits (148), Expect = 2e-11
 Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G  GS +  +   +G ++          VR+        + +         D   
Sbjct: 5   IIGATGRAGSRILEEAKNRGHEVTAI-------VRNAGKITQTHKDI-NILQKDIFDLTL 56

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS---ALNADP 139
             +   NVV++  G      +   A+ +V     L  +       + + +    +L  D 
Sbjct: 57  SDLSDQNVVVDAYGI-----SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDE 111

Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEA----------TIFRPSDMYGSGDKFLRYY 189
           +  T   S G       Y        +  E           T   PS M+  G++   Y 
Sbjct: 112 DGNTLLESKG--LREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDY- 168

Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
               +     L     G       + + D A A++   + P+   + +   G 
Sbjct: 169 ----QIGKDHLLFGSDG----NSFISMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 61.8 bits (150), Expect = 4e-11
 Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 27/241 (11%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYR-----GNFYDVRDLRLCGDLG-QVLFQPYHPR 76
           + GA+GY+G ++       G    +  R      N    + L      G  ++       
Sbjct: 9   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID-- 66

Query: 77  NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
           +   + +A+K  +VVI+           T+    +E    + +  KE+G  K    S   
Sbjct: 67  DHASLVEAVKNVDVVIS-----------TVGSLQIESQVNIIKAIKEVGTVKRFFPSEFG 115

Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
            D +   + +      +  K +  + +  E    T    +   G    FLR         
Sbjct: 116 NDVDNV-HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY---FLRSLAQAGLTA 171

Query: 197 F--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDW 253
               K+ +   G   +   V   D+    + A  DP    K      P   L L+EL+  
Sbjct: 172 PPRDKVVILGDGNARV-VFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVAL 230

Query: 254 F 254
           +
Sbjct: 231 W 231

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 29/231 (12%), Positives = 65/231 (28%), Gaps = 31/231 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V GA+G  GS +  +  ++G +++         VRD +   D                  
Sbjct: 5   VLGATGRAGSAIVAEARRRGHEVLAV-------VRDPQKAADRLGATVATLVKEPLVLTE 57

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA----- 137
             +   + V++ +   + +    +   +++    L  L +         + + +      
Sbjct: 58  ADLDSVDAVVDALSVPWGSGRGYL---HLDFATHLVSLLRNSDTLAVFILGSASLAMPGA 114

Query: 138 ----DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA--TIFRPSDMYGSGDKFLRYYGH 191
                 + P    S            E + L+           PS+ + SG         
Sbjct: 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP-------- 166

Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
                +          E  +  +  G++A AI+   + P A          
Sbjct: 167 --ATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDA 215

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 47/232 (20%)

Query: 23  VFGASGYMGSYLCNKL-GKQGSQIII----PYRGNFYDVRDLRL-CGDLGQVLFQPYHPR 76
           + GA G +  ++ N+L  KQ  +  +    P + +     + ++  GD+           
Sbjct: 28  ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDV----------L 77

Query: 77  NDDEIRKAIKYSNVVI-NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
           N   +++A++  ++V  NL G +   +  ++  A            K   V++ I + +L
Sbjct: 78  NHAALKQAMQGQDIVYANLTGEDLDIQANSVIAA-----------MKACDVKRLIFVLSL 126

Query: 136 NADPNPPTYYISGGSQF----YRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
                 P  ++   +       +   +    +     E TI RP+      D        
Sbjct: 127 GIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPA-WLTDED-------- 177

Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGP 242
                     +  + E      V    VAA I      P+   G+      P
Sbjct: 178 -----IIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP 224

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.6 bits (138), Expect = 2e-09
 Identities = 36/230 (15%), Positives = 69/230 (30%), Gaps = 52/230 (22%)

Query: 70  FQPYHPRNDDEIRKAIKYSNVVINLIGREFAT--KNFTIADANVEIPAR-LARL------ 120
           +  +   N D++   I+ S  +  L   E+       ++   +  IP   L+ +      
Sbjct: 344 WDNWKHVNCDKLTTIIESS--LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 121 -SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV----------LREFPE 169
               + V K    S +   P   T  I       + K + E  +           + F  
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 170 ATIFRPS-DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP-VYVGD---VAAAIV 224
             +  P  D Y     F  + GH   H    L   +  E       V++ D   +   I 
Sbjct: 462 DDLIPPYLDQY-----FYSHIGH---H----LKNIEHPERMTLFRMVFL-DFRFLEQKIR 508

Query: 225 AACKDPDAAGKIYQAVGPKRYLLSELLD--WFHVVMKKGEPDYGYYRYDL 272
                 +A+G           +L+ L    ++   +   +P Y      +
Sbjct: 509 HDSTAWNASG----------SILNTLQQLKFYKPYICDNDPKYERLVNAI 548

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 39/333 (11%), Positives = 86/333 (25%), Gaps = 111/333 (33%)

Query: 34  LCNKLGKQGSQII-----IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN----DDEIRKA 84
           L  ++    +        I  R +       RL       L    +        +     
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-------LKSKPYENCLLVLLN----- 252

Query: 85  IKYSNVVINLIGREFA--------TKNFTIADA-------NVEIPARLARLSKEMGVE-- 127
           ++ +          F         T+   + D        ++ +      L+ +      
Sbjct: 253 VQNAKAW-----NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 128 -KFIHIS-------ALNADP------------NPPTYYISGGSQFYRTKYQGEKEVLREF 167
            K++           L  +P               T+        ++     +K  L   
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW------DNWK-HVNCDK--LTTI 358

Query: 168 PEATI--FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVY-------VGD 218
            E+++    P++                R +F +L+V+      I   +        +  
Sbjct: 359 IESSLNVLEPAEY---------------RKMFDRLSVFPPSAH-IPTILLSLIWFDVIKS 402

Query: 219 VAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDY-------GYYRYD 271
               +V          K      PK   +S +   +  +  K E +Y        +Y   
Sbjct: 403 DVMVVVNKLHKYSLVEK-----QPKESTIS-IPSIYLELKVKLENEYALHRSIVDHYNIP 456

Query: 272 LRYDPVMPLKLFINGLFPGYPMGHL-TPERVER 303
             +D    +  +++  F  +   HL   E  ER
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 56.2 bits (135), Expect = 3e-09
 Identities = 34/243 (13%), Positives = 68/243 (27%), Gaps = 19/243 (7%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ--VLFQPYHPRNDDE 80
           + GA+G++G ++            I  R         ++   L     +         + 
Sbjct: 15  IAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEA 74

Query: 81  IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
           + K +K   + I ++         T+   ++     L +  K +G  K    S    D N
Sbjct: 75  MEKILKEHEIDI-VV--------STVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVN 125

Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF--R 198
                +  G   YR K +  + V       T    + +            H    +    
Sbjct: 126 RAD-PVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASW---PYYNNIHPSEVLPPTD 181

Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDWFHVV 257
              +Y  G       V   D+    +    D     K          L ++EL   +   
Sbjct: 182 FFQIYGDGNVKA-YFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK 240

Query: 258 MKK 260
           + +
Sbjct: 241 IGR 243

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 24/240 (10%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII---PYRGNFYDVRDLRLCGDLGQ--VLFQPYHPRN 77
           + G +G +G ++     K G+                    L  +     V+       +
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 78  DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
            + + KAIK  ++VI                  +E   ++ +  KE G  K    S    
Sbjct: 67  HETLVKAIKQVDIVIC-----------AAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL 115

Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
           D +     +    Q +  K    + +  E    T             FLR    +     
Sbjct: 116 DVDRHDA-VEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFT---GYFLRNLAQLDATDP 171

Query: 198 --RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDWF 254
              K+ +   G       V   DV    + A  DP+   K      PK YL  +E++  +
Sbjct: 172 PRDKVVILGDGNVKG-AYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALW 230

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 53.4 bits (128), Expect = 3e-08
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 21/241 (8%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-YHPRNDDEI 81
           +FG +GY+G+++     K G    +  R N      L     LG ++ +        +++
Sbjct: 16  IFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD--EHEKL 73

Query: 82  RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
            + +K  +VVI+            +A   +    ++    K  G  K    S    + + 
Sbjct: 74  VELMKKVDVVIS-----------ALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDR 122

Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
               +         K    + +       T    +        F+ Y    +     ++ 
Sbjct: 123 IN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA---SYFINYLLRPY-DPKDEIT 177

Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDWFHVVMKK 260
           VY  GE       Y  D+    +    DP A  ++         +   EL+  +   + K
Sbjct: 178 VYGTGEAKF-AMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK 236

Query: 261 G 261
            
Sbjct: 237 K 237

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 51/251 (20%), Positives = 85/251 (33%), Gaps = 79/251 (31%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G  +  +L  +  ++I        DV+DL    D+           N   + 
Sbjct: 17  ITGANGQLGREIQKQLKGKNVEVI------PTDVQDL----DI----------TNVLAVN 56

Query: 83  KAIKYS--NVVINLIGREFAT---------KNFTIADA-NVEIPARLARLSKEMGVEKFI 130
           K       NVVIN                 + + +A   N   P  LA  +  +G  + +
Sbjct: 57  KFFNEKKPNVVIN------CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIV 109

Query: 131 HIS-------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
            IS                 + NP + Y   G    +TK +GE  V    P+  I R + 
Sbjct: 110 QISTDYVFDGEAKEPITEFDEVNPQSAY---G----KTKLEGENFVKALNPKYYIVRTAW 162

Query: 178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIK-------QPVYVGDVAAAIVAACKDP 230
           +YG G+ F++    M       L    K  + +K        P    D+A  ++    D 
Sbjct: 163 LYGDGNNFVK---TMIN-----LG---KTHDELKVVHDQVGTPTSTVDLARVVLKVI-DE 210

Query: 231 DAAGKIYQAVG 241
              G  +    
Sbjct: 211 KNYG-TFHCTC 220

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 35/249 (14%), Positives = 69/249 (27%), Gaps = 31/249 (12%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYR--------GNFYDVRDLRLCGDLGQVLFQPYH 74
           ++G +GY+G ++            I  R         +     + R  G    V      
Sbjct: 9   IYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMG----VTIIEGE 64

Query: 75  PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
               +++   +K  ++VI+            +    +     +    K  G  K    S 
Sbjct: 65  MEEHEKMVSVLKQVDIVIS-----------ALPFPMISSQIHIINAIKAAGNIKRFLPSD 113

Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
              + +     +         K    + +       T    +        F+ Y  H   
Sbjct: 114 FGCEEDRIK-PLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAY---FVNYLLHPSP 169

Query: 195 HVF--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELL 251
           H      + +Y  GE       Y  D+A   +    DP    +I     PK  +  +EL+
Sbjct: 170 HPNRNDDIVIYGTGETKF-VLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELI 228

Query: 252 DWFHVVMKK 260
             +      
Sbjct: 229 SLWEAKSGL 237

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 51.8 bits (124), Expect = 8e-08
 Identities = 41/248 (16%), Positives = 80/248 (32%), Gaps = 54/248 (21%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA G++G  L   L       I                               ++E+ 
Sbjct: 5   ITGAKGFVGKNLKADLTSTTDHHIFEV-HRQ----------------------TKEEELE 41

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI-SALNADPNP 141
            A+  ++ +++L G      +   +  NV     +  +      +  I + S++ A  + 
Sbjct: 42  SALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDN 101

Query: 142 PTYYISGGSQFY-RTKYQGEKEVLREFPE-----ATIFRPSDMYGSGDKFLRYYGHMWRH 195
           P          Y  +K QGE ++LRE+ E       I+R  +++G          +    
Sbjct: 102 P----------YGESKLQGE-QLLREYAEEYGNTVYIYRWPNLFGK-----WCKPNYNSV 145

Query: 196 VFRKLAVYKKGEE-TIKQP------VYVGDVAAAIVAAC-KDPDAAGKIYQAVGPKRYLL 247
           +        + EE  +          YV D+ A I  A    P     +       +  L
Sbjct: 146 IATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTL 205

Query: 248 SELLDWFH 255
            E++D  +
Sbjct: 206 GEIVDLLY 213

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 55/256 (21%), Positives = 82/256 (32%), Gaps = 80/256 (31%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           +FG +G +G  L   L   G+ I         DV     CGD            N   + 
Sbjct: 5   LFGKTGQVGWELQRSLAPVGNLI-------ALDVHSKEFCGDFS----------NPKGVA 47

Query: 83  KAIKYS--NVVINL----------IGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
           + ++    +V++N              E A         N      +A+ + E G    +
Sbjct: 48  ETVRKLRPDVIVNAAAHTAVDKAESEPELAQL------LNATSVEAIAKAANETGA-WVV 100

Query: 131 HIS-------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
           H S                   +P   Y   G    +TK  GEK +    P+  IFR S 
Sbjct: 101 HYSTDYVFPGTGDIPWQETDATSPLNVY---G----KTKLAGEKALQDNCPKHLIFRTSW 153

Query: 178 MYGS-GDKFLRYYGHMWRHVFRKLAVYKKGEETIK----Q---PVYVGDVAAAIVAA--- 226
           +Y   G+ F +    M R     LA   K  +T+     Q   P     +A     A   
Sbjct: 154 VYAGKGNNFAK---TMLR-----LA---KERQTLSVINDQYGAPTGAELLADCTAHAIRV 202

Query: 227 -CKDPDAAGKIYQAVG 241
               P+ AG +Y  V 
Sbjct: 203 ALNKPEVAG-LYHLVA 217

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 27/224 (12%), Positives = 56/224 (25%), Gaps = 31/224 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +   L   L       I  Y           +       + +    +N   + 
Sbjct: 10  ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEG-SFQNPGXLE 68

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
           +A+  + VV                  +    A + +      + + I +S        P
Sbjct: 69  QAVTNAEVVFVGAM------------ESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFP 116

Query: 143 TYYIS-----GGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
                         + + + Q    +       TI R + +Y   +              
Sbjct: 117 VALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEX------------- 163

Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
               +  +G +     V    V  AI       D       ++G
Sbjct: 164 TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIG 207

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 49.4 bits (119), Expect = 4e-07
 Identities = 50/256 (19%), Positives = 81/256 (31%), Gaps = 88/256 (34%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G  L  +L  +   I        +D + L    D+           N  +++
Sbjct: 10  ITGANGQLGKQLQEELNPEEYDIY------PFDKKLL----DI----------TNISQVQ 49

Query: 83  KAIKYS--NVVINLIGREFAT---------KNFTIADA-NVEIPARLARLSKEMGVEKFI 130
           + ++    +++I+                 K   +A   N      +A  S+ +G  K +
Sbjct: 50  QVVQEIRPHIIIH------CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLV 102

Query: 131 HIS-------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
           +IS                 +P P   Y   G     +KY GE+ V     +  I R S 
Sbjct: 103 YISTDYVFQGDRPEGYDEFHNPAPINIY---G----ASKYAGEQFVKELHNKYFIVRTSW 155

Query: 178 MYGSGDKFLRYYGH-----MWRHVFRKLAVYKKGEETIK-------QPVYVGDVAAAIVA 225
           +YG        YG+     M R     L    K  E I         P YV D+   I  
Sbjct: 156 LYGK-------YGNNFVKTMIR-----LG---KEREEISVVADQIGSPTYVADLNVMINK 200

Query: 226 ACKDPDAAGKIYQAVG 241
                   G  Y    
Sbjct: 201 LI-HTSLYG-TYHVSN 214

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 48.3 bits (116), Expect = 8e-07
 Identities = 51/248 (20%), Positives = 80/248 (32%), Gaps = 72/248 (29%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GASG +G  L   L ++   I +           L    DL           +   + 
Sbjct: 5   ITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKL----DL----------TDFPRLE 50

Query: 83  KAIKYS--NVVINL----------IGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
             I     +V+IN           I +E A K       N E    + R  K +     +
Sbjct: 51  DFIIKKRPDVIINAAAMTDVDKCEIEKEKAYK------INAEAVRHIVRAGKVIDS-YIV 103

Query: 131 HIS------------ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
           HIS                 PNP  YY  G      +K  GE   L+   ++ I R S +
Sbjct: 104 HISTDYVFDGEKGNYKEEDIPNPINYY--G-----LSKLLGETFALQ--DDSLIIRTSGI 154

Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEET--IKQ---PVYVGDVAAAIVAACKDPDAA 233
           +     F  Y   +++         K+G+     K    P+    +A+AI+   +     
Sbjct: 155 FR-NKGFPIY---VYK-----TL--KEGKTVFAFKGYYSPISARKLASAILELLE-LRKT 202

Query: 234 GKIYQAVG 241
           G I    G
Sbjct: 203 G-IIHVAG 209

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 40/283 (14%), Positives = 83/283 (29%), Gaps = 45/283 (15%)

Query: 20  VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL--RLCGDLGQVLFQPYHP-- 75
           VA + G +G +G+ L   L            G  + V  +  R      +     Y    
Sbjct: 3   VALIVGVTGIIGNSLAEILPLAD------TPGGPWKVYGVARRTRPAWHEDNPINYVQCD 56

Query: 76  -RNDDEIRKAIKYSNVVINLIGREFATKNF--TIADANVEIPARL--ARLSKEMGVEKFI 130
             + D+ +  +     V ++    +A ++      +AN ++   +  A +     ++   
Sbjct: 57  ISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116

Query: 131 HISALNADPNPPTYYISGGSQF------------YRTKYQGEKEVLREFPEA-----TIF 173
             +       P   Y    S                  Y  E  +L E  +      ++ 
Sbjct: 117 LQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVH 176

Query: 174 RPSDMYGSGD-------KFLRYYGHMWRHVFRKLAVYKKGE--ETIKQPVYVGDVAAAIV 224
           RP +++G            L  Y  + +H  + L         +          +A   +
Sbjct: 177 RPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHI 236

Query: 225 AACKDPDAAGKIYQAVGPK----RYLLSELLDWFHVVMKKGEP 263
            A  DP A  + +          ++    L + F V   + E 
Sbjct: 237 WAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEE 279

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 34/244 (13%), Positives = 71/244 (29%), Gaps = 55/244 (22%)

Query: 22  TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR------------DLRLCG------ 63
            VFG +G  G  +   L + G+          + VR            +LRL G      
Sbjct: 9   VVFGGTGAQGGSVARTLLEDGT----------FKVRVVTRNPRKKAAKELRLQGAEVVQG 58

Query: 64  DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPA--RLARLS 121
           D            +   +  A+  +            T  +       E+     LA L+
Sbjct: 59  DQD----------DQVIMELALNGAYATF------IVTNYWESCSQEQEVKQGKLLADLA 102

Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYG 180
           + +G+   ++    N             +  +  K + E E  R+     T  R    + 
Sbjct: 103 RRLGLHYVVYSGLENIKKLTAGRL---AAAHFDGKGEVE-EYFRDIGVPMTSVRLPCYF- 157

Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQA 239
             +  L ++        +   +     +     + V D+   +++  K P+   G+    
Sbjct: 158 --ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL 215

Query: 240 VGPK 243
              +
Sbjct: 216 STCR 219

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 35/264 (13%), Positives = 70/264 (26%), Gaps = 78/264 (29%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQI-------------IIPYRGNFYDVRDL-RLCGDLGQV 68
           + G  G +G  L  +L  QG ++             +     +      L  +     ++
Sbjct: 8   IAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEI 66

Query: 69  LFQ--PYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
           L         +D+  R                          + VE         +   +
Sbjct: 67  LVYCVAASEYSDEHYRL-------------------------SYVEGLRNTLSALEGAPL 101

Query: 127 EKFIHISALNA------------DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFR 174
           +    +S+                P     +        +   + E  +L  +  +TI R
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG------KRMLEAEA-LLAAYS-STILR 153

Query: 175 PSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP---VYVGDVAAAIVAACKDPD 231
            S +YG G           R    + A   +           ++  D AA I    +   
Sbjct: 154 FSGIYGPG-----------RLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRS 202

Query: 232 AA--GKIYQAVGPKRYLLSELLDW 253
            A   ++Y     +   + +LL W
Sbjct: 203 HAVPERLYIVTDNQPLPVHDLLRW 226

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 17/130 (13%)

Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
           K  GV+   + S L+AD +P                + EK +       T+ R    Y  
Sbjct: 92  KAAGVKFIAYTSLLHADTSPLG--------LADEHIETEKMLADSGIVYTLLRNG-WYS- 141

Query: 182 GDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
            + +L        H VF        G+          D AAA      +    GK+Y+  
Sbjct: 142 -ENYLASAPAALEHGVFI--GAAGDGKIA---SATRADYAAAAARVISEAGHEGKVYELA 195

Query: 241 GPKRYLLSEL 250
           G   + L++L
Sbjct: 196 GDSAWTLTQL 205

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 18/129 (13%), Positives = 34/129 (26%), Gaps = 14/129 (10%)

Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
           ++ GV+   +     A+ +                   E  +       T  R + +Y  
Sbjct: 95  RDAGVKHIAYTGYAFAEESIIP--------LAHVHLATEYAIRTTNIPYTFLRNA-LYT- 144

Query: 182 GDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
            D F+             +     G       V   ++A A      +     K Y  V 
Sbjct: 145 -DFFVNEGLRASTESGAIVTNAGSGIVN---SVTRNELALAAATVLTEEGHENKTYNLVS 200

Query: 242 PKRYLLSEL 250
            + +   EL
Sbjct: 201 NQPWTFDEL 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	303
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	100.0
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	100.0
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	100.0
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.98
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.98
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.98
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.98
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.93
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.93
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.92
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.92
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.92
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.92
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.92
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.91
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.91
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.91
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.91
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.91
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.91
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.91
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.91
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.91
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.91
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.91
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.91
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.91
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.9
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.9
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.9
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.9
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.9
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.9
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.9
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.9
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.9
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.9
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.9
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.9
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.9
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.9
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.9
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.9
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.9
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.9
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.9
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.9
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.9
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.9
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.9
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.9
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.89
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.89
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.89
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.89
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.89
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.89
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.89
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.89
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.89
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.89
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.89
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.89
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.89
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.89
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.89
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.89
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.89
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.89
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.89
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.89
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.88
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.88
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.88
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.88
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.88
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.88
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.88
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.88
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.88
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.88
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.88
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.88
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.88
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.87
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.87
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.87
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.87
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.87
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.87
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.87
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.87
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.87
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.87
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.87
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.87
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.87
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.87
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.87
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.86
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.86
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.86
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.86
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.86
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.86
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.85
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.85
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.85
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.85
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.84
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.84
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.84
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.83
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.83
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.83
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.83
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.83
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.83
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.82
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.82
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.82
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.81
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.81
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.81
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.81
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.8
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.8
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.8
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.78
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.77
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.77
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.72
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.7
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.68
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.67
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.66
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.65
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.55
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.53
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.53
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.51
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.47
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.46
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.42
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.38
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.37
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.26
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.1
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.08
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.99
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.96
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.94
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.94
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.93
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.93
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.84
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.81
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.8
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.75
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.74
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.68
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.64
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.62
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.58
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.56
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.56
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.44
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.4
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.34
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.33
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.26
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.18
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.18
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.17
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.12
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	98.11
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.06
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.04
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.98
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.97
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.97
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.94
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.93
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.93
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.93
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.93
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.92
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.89
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.88
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.86
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.86
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.84
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.83
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.83
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.8
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.78
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.77
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.7
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.69
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.68
1lnq_A	336	MTHK channels, potassium channel related protein;	97.68
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.67
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.65
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.64
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.59
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.59
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.59
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.58
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.57
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.54
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.54
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.53
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.5
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.5
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.49
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.48
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.48
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.47
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.46
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.46
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.45
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.43
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.43
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.43
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.42
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.41
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.39
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.39
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.39
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.39
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.38
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.38
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.38
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.38
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.38
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.38
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.37
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.35
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.33
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.31
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.31
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.28
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.28
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.27
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.27
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.26
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.26
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.25
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.24
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.24
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.22
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.22
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.21
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.19
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.19
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.18
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.18
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.18
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.17
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.16
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.16
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.13
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.12
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.12
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.12
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.12
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.12
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.08
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	97.08
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.07
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.06
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.05
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.05
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.04
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.04
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.02
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.02
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.97
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	96.97
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.96
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.95
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.93
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.93
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.93
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.93
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.92
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.92
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.91
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.91
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.88
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.88
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.88
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.88
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.87
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.87
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.85
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.84
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.82
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	96.81
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.81
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.8
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.78
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.77
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.77
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.76
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.74
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	96.74
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.73
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.73
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.73
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.72
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.72
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.72
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.72
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.71
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	96.7
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.7
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.69
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.69
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.69
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.68
2w70_A	449	Biotin carboxylase; ligase, ATP-binding, fatty aci	96.68
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.66
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.66
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.66
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.65
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.64
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.63

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.6e-41  Score=294.10  Aligned_cols=236  Identities=13%  Similarity=0.138  Sum_probs=201.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +|+|||||||||||++++++|+++|++|++++|+ ....+ +      ++++++.+|+. .+++.++++++|+|||+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-I------NDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-C------CceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            5799999999999999999999999999999998 33222 2      26999999999 99999999999999999998


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHh----hC
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLR----EF  167 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~----~~  167 (303)
                      .....+...+++|+.++.+++++|++.++++|||+||.++|+.      .|+.|..|.++|+.+|..+|++++.    .+
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g  152 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKG  152 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC
Confidence            6555778899999999999999999999999999999999876      3555677889999999999999987    48


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      ++++++||+++|||+......+..++..  .+..+.+++++.+. ++|+|++|+|++++.+++++. .+++||+++++.+
T Consensus       153 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~  230 (311)
T 3m2p_A          153 LCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAK-REFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDAL  230 (311)
T ss_dssp             CEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCC-EEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEE
T ss_pred             CCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeE-EceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcc
Confidence            9999999999999976533333333333  46677777888877 899999999999999998765 6789999999999


Q ss_pred             CHHHHHHHHHHHhcCCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+.|+++.+++.+|.+..+
T Consensus       231 s~~e~~~~i~~~~g~~~~~  249 (311)
T 3m2p_A          231 TNYEVANTINNAFGNKDNL  249 (311)
T ss_dssp             CHHHHHHHHHHHTTCTTCE
T ss_pred             cHHHHHHHHHHHhCCCCcc
Confidence            9999999999999988664

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=7.8e-42  Score=302.18  Aligned_cols=248  Identities=16%  Similarity=0.080  Sum_probs=205.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC------CceEEEecCCCCHHHHHHHhcc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL------GQVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      +++++|+|||||||||||++|+++|+++|++|++++|+..............      ++++++.+|+.|.+++.+++++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG  100 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence            4467889999999999999999999999999999999765433322211111      4699999999999999999999


Q ss_pred             cCEEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHH
Q psy4233          88 SNVVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKY  157 (303)
Q Consensus        88 ~D~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~  157 (303)
                      +|+|||+|+...    ...+...+++|+.++.+++++|++.++++|||+||.++|+..      |+.+..|.++|+.+|.
T Consensus       101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  180 (351)
T 3ruf_A          101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKY  180 (351)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred             CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHH
Confidence            999999999632    235567889999999999999999999999999999999763      4455677889999999


Q ss_pred             HHHHHHHh----hCCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         158 QGEKEVLR----EFPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       158 ~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+|++++.    .+++++++||+++|||+....    ..+..++..  .+..+.+++++.+. ++|+|++|+|++++.++
T Consensus       181 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~i~v~Dva~a~~~~~  259 (351)
T 3ruf_A          181 VNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETS-RDFCYIDNVIQMNILSA  259 (351)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE-ECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeE-EeeEEHHHHHHHHHHHH
Confidence            99998876    389999999999999975432    233333332  56677788888887 89999999999999999


Q ss_pred             cC-CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         228 KD-PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       228 ~~-~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      .+ +...+++||+++++.+|+.|+++.+++.+|.+.
T Consensus       260 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  295 (351)
T 3ruf_A          260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIH  295 (351)
T ss_dssp             TCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTC
T ss_pred             hhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccc
Confidence            87 345788999999999999999999999999843

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.6e-41  Score=297.33  Aligned_cols=249  Identities=18%  Similarity=0.170  Sum_probs=203.6

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhcc--
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--   87 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   87 (303)
                      .+++++|+|||||||||||++|+++|+++|  ++|++++|... .....+......++++++.+|+.|.+++.+++++  
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            344568899999999999999999999999  78888888652 2223333333336799999999999999999998  


Q ss_pred             cCEEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K  156 (303)
                      +|+|||+|+...    ...+...+++|+.++.+++++|++.++++|||+||.++|+..       |+.|..|.++|+.+|
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK  178 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSK  178 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHH
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHH
Confidence            999999999643    245667899999999999999999999999999999998763       455667889999999


Q ss_pred             HHHHHHHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         157 YQGEKEVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       157 ~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+|++++.    .+++++++||+.+|||+......+..++..  .+..+++++++.+. ++|+|++|+|++++.+++++
T Consensus       179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~~~~~~~  257 (346)
T 4egb_A          179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNV-RDWLHVTDHCSAIDVVLHKG  257 (346)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCE-ECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeE-EeeEEHHHHHHHHHHHHhcC
Confidence            999999987    489999999999999986543444444433  55668888888887 89999999999999999876


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      . .|++||+++++.+|+.|+++.+++.+|.+.+
T Consensus       258 ~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          258 R-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             C-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred             C-CCCEEEECCCCceeHHHHHHHHHHHhCCCcc
Confidence            5 6889999999999999999999999998765

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-39  Score=290.77  Aligned_cols=246  Identities=15%  Similarity=0.169  Sum_probs=201.6

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCC-CHHHHHHHhcccCE
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-NDDEIRKAIKYSNV   90 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~D~   90 (303)
                      ..+|+||+|||||||||||++|+++|+++ |++|++++|+........    ..++++++.+|+. |.+.+.++++++|+
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----KHERMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----GSTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----cCCCeEEEeCccCCCHHHHHHHhccCCE
Confidence            34567899999999999999999999998 899999999764432221    1257999999999 99999999999999


Q ss_pred             EEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCC-------------CCCCchh
Q psy4233          91 VINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYI-------------SGGSQFY  153 (303)
Q Consensus        91 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------------~~~~~y~  153 (303)
                      |||+|+....    ..+...+++|+.++.+++++|++.+ ++|||+||.++|+.....+.             .|.++|+
T Consensus        95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~  173 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYA  173 (372)
T ss_dssp             EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHH
T ss_pred             EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHH
Confidence            9999997432    3556788999999999999999999 89999999999986433221             3445899


Q ss_pred             HHHHHHHHHHHhh---CCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHH
Q psy4233         154 RTKYQGEKEVLRE---FPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       154 ~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      .+|..+|++++.+   +++++++||+++|||+...        ...+..++..  .+..+++++++.+. ++|+|++|+|
T Consensus       174 ~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva  252 (372)
T 3slg_A          174 CSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQK-RAFTYVDDGI  252 (372)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCE-EECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceE-EEEEEHHHHH
Confidence            9999999999988   8999999999999997531        2233333333  56677788888777 8999999999


Q ss_pred             HHHHHHhcCCC--CCCcEEEEeCC-cccCHHHHHHHHHHHhcCCCCC
Q psy4233         221 AAIVAACKDPD--AAGKIYQAVGP-KRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       221 ~~~~~~~~~~~--~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++++.+++++.  ..+++||++++ +.+|+.|+++.+++.+|.+..+
T Consensus       253 ~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~  299 (372)
T 3slg_A          253 SALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEY  299 (372)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTT
T ss_pred             HHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccc
Confidence            99999998764  56889999994 8999999999999999987653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.8e-39  Score=286.26  Aligned_cols=244  Identities=14%  Similarity=0.112  Sum_probs=200.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHh--CCCeEEEeecCCCccc---------ccchhcCCCCceEEEecCCCCHHHHH
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGK--QGSQIIIPYRGNFYDV---------RDLRLCGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~--~g~~V~~~~R~~~~~~---------~~~~~~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      +.+++|+|||||||||||++++++|++  +|++|++++|+.....         ..... ....+++++.+|++|++++.
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN-LIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG-GTTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh-ccccCceEEECCCCCHHHHH
Confidence            456789999999999999999999999  8999999999654110         11111 11245799999999999999


Q ss_pred             HH-hcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCCCCCCCCchhH
Q psy4233          83 KA-IKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTYYISGGSQFYR  154 (303)
Q Consensus        83 ~~-~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~~~~~~~~y~~  154 (303)
                      ++ ..++|+|||+|+...  ...+...+++|+.++.+++++|++.+++ |||+||.++|+..     |+.+..|.++|+.
T Consensus        85 ~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~  163 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGF  163 (362)
T ss_dssp             HHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHH
T ss_pred             HhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHH
Confidence            98 788999999999643  3567789999999999999999999986 9999999998763     4456677889999


Q ss_pred             HHHHHHHHHHhhC--CCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLREF--PEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~~--~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|..+|++++.+.  ++++++||+++|||+....    ..+..++..  .+..+.+++++.+. ++|+|++|+|++++.+
T Consensus       164 sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~ai~~~  242 (362)
T 3sxp_A          164 SKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQL-RDFVYIEDVIQANVKA  242 (362)
T ss_dssp             HHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCE-EECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeE-EccEEHHHHHHHHHHH
Confidence            9999999999986  7899999999999986532    333344333  45566677777777 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++. .| +||+++++.+|+.|+++.+++.+| +..
T Consensus       243 ~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~  276 (362)
T 3sxp_A          243 MKAQK-SG-VYNVGYSQARSYNEIVSILKEHLG-DFK  276 (362)
T ss_dssp             TTCSS-CE-EEEESCSCEEEHHHHHHHHHHHHC-CCE
T ss_pred             HhcCC-CC-EEEeCCCCCccHHHHHHHHHHHcC-CCc
Confidence            98654 57 999999999999999999999999 544

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.4e-39  Score=287.26  Aligned_cols=238  Identities=18%  Similarity=0.096  Sum_probs=199.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ...++|+|||||||||||++|+++|+++|++|++++|+...           .+++++.+|+.|.+++.++++++|+|||
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            34567899999999999999999999999999999998643           3588999999999999999999999999


Q ss_pred             ccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHHHHH
Q psy4233          94 LIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN--------PPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        94 ~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      +|+....  ......+++|+.++.+++++|++.++++|||+||.++|+.        .|+.+..+.++|+.+|..+|+++
T Consensus        84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  163 (347)
T 4id9_A           84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELV  163 (347)
T ss_dssp             CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            9997433  2336799999999999999999999999999999999976        34556677889999999999999


Q ss_pred             Hhh----CCCEEEEeeccee-------------eCCCch-----------hhHHHHHHHh--hhcceeeecCCCceeeCc
Q psy4233         164 LRE----FPEATIFRPSDMY-------------GSGDKF-----------LRYYGHMWRH--VFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       164 ~~~----~~~~~ilrp~~~~-------------G~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  213 (303)
                      +.+    +++++++||+++|             ||+...           ...+..++..  .+..+.+++++.+. ++|
T Consensus       164 ~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~  242 (347)
T 4id9_A          164 RFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENG-RPF  242 (347)
T ss_dssp             HHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTC-CBC
T ss_pred             HHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcc-cCC
Confidence            753    7999999999999             876432           1333334333  45566788888877 789


Q ss_pred             ----eeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         214 ----VYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       214 ----i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                          +|++|+|++++.+++++...+++||+++++.+|+.|+++.+++.+|.+..
T Consensus       243 ~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  296 (347)
T 4id9_A          243 RMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV  296 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred             ccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence                99999999999999987566889999999999999999999999998765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-39  Score=284.38  Aligned_cols=247  Identities=17%  Similarity=0.178  Sum_probs=199.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc--ccCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK--YSNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi   92 (303)
                      ++|+|||||||||||++++++|+++|++|++++|+.....+......  ...+++++.+|++|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            46799999999999999999999999999999997654332221110  12468999999999999999998  799999


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+|+...    ...+...++.|+.++.++++++++.++++||++||.++|+..      |+.|..+.++|+.+|..+|++
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            9999743    234557889999999999999999999999999999999753      445667778999999999999


Q ss_pred             HHhh-----CCCEEEEeecceeeCCCc-------------hhhHHHHHHHhhhcceeeec------CCCceeeCceeHHH
Q psy4233         163 VLRE-----FPEATIFRPSDMYGSGDK-------------FLRYYGHMWRHVFRKLAVYK------KGEETIKQPVYVGD  218 (303)
Q Consensus       163 ~~~~-----~~~~~ilrp~~~~G~~~~-------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D  218 (303)
                      ++.+     +++++++||+++|||+..             ....+..........++++|      ++.+. ++|+|++|
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~i~v~D  242 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV-RDYIHVVD  242 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCE-ECEEEHHH
T ss_pred             HHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCee-EeeEEHHH
Confidence            9874     489999999999998531             12222222221335666677      66777 89999999


Q ss_pred             HHHHHHHHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         219 VAAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       219 va~~~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +|++++.++++  +...+++||+++++.+|+.|+++.+++.+|.+.++
T Consensus       243 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  290 (341)
T 3enk_A          243 LARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPY  290 (341)
T ss_dssp             HHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             HHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcce
Confidence            99999999976  23457899999999999999999999999998764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=7.4e-39  Score=285.89  Aligned_cols=243  Identities=17%  Similarity=0.153  Sum_probs=197.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++|+|||||||||||++++++|+++| ++|++++|+.....+.+.   ..++++++.+|+.|++++.++++++|+|||+
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~  106 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHL  106 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence            457899999999999999999999999 999999997654322221   1256999999999999999999999999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCC--------CCC---CC-CCCCchhHHHH
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNP--------PTY---YI-SGGSQFYRTKY  157 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~--------~~~---~~-~~~~~y~~~K~  157 (303)
                      |+....    ..+...+++|+.++.+++++|++. ++++|||+||.++|+..        |+.   |. .+.++|+.+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            997532    356678999999999999999999 89999999999998752        333   44 67789999999


Q ss_pred             HHHHHHHhh----CCCEEEEeecceeeCCC---------ch----hhHHHHHHHh--hhcceeeecCCCceeeCceeHHH
Q psy4233         158 QGEKEVLRE----FPEATIFRPSDMYGSGD---------KF----LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~---------~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      .+|++++.+    +++++++||+.+|||+.         ..    ...+..++..  .+..+.+++++.+. ++|++++|
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~-~~~i~v~D  265 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT-RDFIFVED  265 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE-ECCEEHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE-EeeEEHHH
Confidence            999998764    89999999999999976         32    2333333332  44556667777777 89999999


Q ss_pred             HHHH-HHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         219 VAAA-IVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       219 va~~-~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +|++ ++.+++++. .| +||+++++.+|+.|+++.+++.+|.+..+
T Consensus       266 va~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  310 (377)
T 2q1s_A          266 VANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTEL  310 (377)
T ss_dssp             HHHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCC
T ss_pred             HHHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCc
Confidence            9999 999998755 57 99999999999999999999999987653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.1e-38  Score=282.16  Aligned_cols=249  Identities=15%  Similarity=0.068  Sum_probs=201.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh----cC--CCCceEEEecCCCCHHHHHHHhcc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CG--DLGQVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~----~~--~~~~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      .++++|+|||||||||||++++++|+++|++|++++|+.....+.+..    ..  ..++++++.+|+.|.+++.+++++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  102 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG  102 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence            346688999999999999999999999999999999975432111110    00  014689999999999999999999


Q ss_pred             cCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHH
Q psy4233          88 SNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKY  157 (303)
Q Consensus        88 ~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~  157 (303)
                      +|+|||+|+....    ..+...+++|+.++.+++++|++.++++|||+||.++|+..      |+.+..+.++|+.+|.
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  182 (352)
T 1sb8_A          103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY  182 (352)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred             CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHH
Confidence            9999999996432    35667889999999999999999999999999999998753      3445567789999999


Q ss_pred             HHHHHHHhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         158 QGEKEVLRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+|++++.+    +++++++||+.+|||+....    ..+..++..  .+..+.+++++.+. ++|++++|+|++++.++
T Consensus       183 ~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~i~v~Dva~a~~~~~  261 (352)
T 1sb8_A          183 VNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS-RDFCYIENTVQANLLAA  261 (352)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE-ECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCce-EeeEEHHHHHHHHHHHH
Confidence            999998753    89999999999999975321    223333222  44556677887777 89999999999999998


Q ss_pred             cCC-CCCCcEEEEeCCcccCHHHHHHHHHHHh---cCCCC
Q psy4233         228 KDP-DAAGKIYQAVGPKRYLLSELLDWFHVVM---KKGEP  263 (303)
Q Consensus       228 ~~~-~~~g~~~~i~~~~~~s~~e~~~~i~~~~---g~~~~  263 (303)
                      .+. ...+++||+++++.+|+.|+++.+++.+   |.+..
T Consensus       262 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             TCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             hccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence            763 3467899999999999999999999999   88765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.8e-38  Score=277.73  Aligned_cols=246  Identities=17%  Similarity=0.160  Sum_probs=196.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |++|+|||||||||||++++++|+++|  ++|++++|.... ..+.+......++++++.+|++|.+++.+++.++|+||
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            346799999999999999999999997  899999996421 22222211113569999999999999999999999999


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGV-EKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~  161 (303)
                      |+|+...    ...+..++++|+.++.+++++|.+.+. ++|||+||.++|+..      |+.|..+.++|+.+|..+|+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9999743    235667899999999999999998875 799999999998753      34456677899999999999


Q ss_pred             HHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233         162 EVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK  235 (303)
Q Consensus       162 ~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  235 (303)
                      +++.    .+++++++||+++|||+......+..++..  .+..+++++++.+. ++|+|++|+|++++.+++++ ..|+
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~~~~~-~~g~  238 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNV-RDWLYVEDHVRAIELVLLKG-ESRE  238 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---C-EEEEEHHHHHHHHHHHHHHC-CTTC
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCce-eeeEEHHHHHHHHHHHHhCC-CCCC
Confidence            9876    379999999999999976432233333322  45567778887777 79999999999999999754 3578


Q ss_pred             EEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         236 IYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       236 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +||+++++.+|+.|+++.+++.+|.+.+
T Consensus       239 ~~~v~~~~~~s~~e~~~~i~~~~g~~~~  266 (336)
T 2hun_A          239 IYNISAGEEKTNLEVVKIILRLMGKGEE  266 (336)
T ss_dssp             EEEECCSCEECHHHHHHHHHHHTTCCST
T ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999998754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-38  Score=278.10  Aligned_cols=241  Identities=18%  Similarity=0.172  Sum_probs=195.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      ||+|||||||||||++++++|+++|++|++++|......+.+     ..+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            579999999999999999999999999999999754332221     1368999999999999999998  899999999


Q ss_pred             ccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          96 GREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        96 ~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      +....    ..+...+++|+.++.+++++|++.+++++|++||.++|+..      |+.|..+.++|+.+|..+|++++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            97532    35567889999999999999999999999999999998753      445566778999999999999887


Q ss_pred             h----CCCEEEEeecceeeCCCc---------hhhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHHHHHH
Q psy4233         166 E----FPEATIFRPSDMYGSGDK---------FLRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       166 ~----~~~~~ilrp~~~~G~~~~---------~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dva~~~  223 (303)
                      +    +++++++||+++|||+..         ....+..++..   ....+.+++      ++.+. ++|+|++|+|+++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~v~v~Dva~a~  234 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI-RDYIHVEDLVAAH  234 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE-ECEEEHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee-EeeEeHHHHHHHH
Confidence            4    799999999999998621         11222223221   233566665      55566 8999999999999


Q ss_pred             HHHhcCCCC--CCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         224 VAACKDPDA--AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       224 ~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +.+++++..  .+++||+++++.+|+.|+++.+++.+|.+.++
T Consensus       235 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  277 (330)
T 2c20_A          235 FLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPA  277 (330)
T ss_dssp             HHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCE
T ss_pred             HHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCce
Confidence            999975322  36799999999999999999999999987653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=6.2e-38  Score=275.65  Aligned_cols=243  Identities=15%  Similarity=0.156  Sum_probs=198.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC---C---CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ---G---SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~---g---~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |+|||||||||||++++++|+++   |   ++|++++|.... ..+.+.......+++++.+|++|++++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            58999999999999999999997   8   999999996432 1122221111256999999999999999999999999


Q ss_pred             EEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHH
Q psy4233          92 INLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        92 i~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~  161 (303)
                      ||+|+....    ..+..++++|+.++.++++++++.++++|||+||.++|+..      |+.|..+.++|+.+|..+|+
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            999997432    35667899999999999999999999999999999998753      44466778899999999999


Q ss_pred             HHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233         162 EVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK  235 (303)
Q Consensus       162 ~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  235 (303)
                      +++.    .+++++++||+.+|||+......+..++..  .+..+++++++.+. ++|+|++|+|++++.+++++ ..|+
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~~~~~~~-~~g~  238 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV-REWVHTDDHCRGIALVLAGG-RAGE  238 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE-EEEEEHHHHHHHHHHHHHHC-CTTC
T ss_pred             HHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCee-EeeEeHHHHHHHHHHHHhCC-CCCC
Confidence            8876    389999999999999976432333333322  45567777888777 89999999999999999754 3578


Q ss_pred             EEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         236 IYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       236 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +||+++++.+|+.|+++.+++.+|.+.+
T Consensus       239 ~~~v~~~~~~s~~e~~~~i~~~~g~~~~  266 (337)
T 1r6d_A          239 IYHIGGGLELTNRELTGILLDSLGADWS  266 (337)
T ss_dssp             EEEECCCCEEEHHHHHHHHHHHHTCCGG
T ss_pred             EEEeCCCCCccHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999998743

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=6.8e-38  Score=276.53  Aligned_cols=242  Identities=14%  Similarity=0.109  Sum_probs=198.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ||+|||||||||||++++++|+++  |++|++++|+.... .+.+.... .++++++.+|++|.+++.++++++|+|||+
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY   82 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence            679999999999999999999999  89999999975321 12211111 256999999999999999999999999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------------------CCCCCCCCCch
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------------------PTYYISGGSQF  152 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------------------~~~~~~~~~~y  152 (303)
                      |+...    ...+...+++|+.++.+++++|.+.++ +|||+||.++|+..                  |+.|..+.++|
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y  161 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  161 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCcc
Confidence            99753    235667899999999999999999988 99999999988643                  22355677899


Q ss_pred             hHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       153 ~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +.+|..+|.+++.+    +++++++||+.+|||+......+..++..  .+..+++++++.+. ++|+|++|+|++++.+
T Consensus       162 ~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~  240 (348)
T 1oc2_A          162 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV-RDWIHTNDHSTGVWAI  240 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCE-EECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCce-EeeEEHHHHHHHHHHH
Confidence            99999999998764    89999999999999976432333333322  44566777887777 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++ ..|++||+++++.+|+.|+++.+++.+|.+.+
T Consensus       241 ~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  276 (348)
T 1oc2_A          241 LTKG-RMGETYLIGADGEKNNKEVLELILEKMGQPKD  276 (348)
T ss_dssp             HHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred             hhCC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            9754 45789999999999999999999999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=8.6e-39  Score=278.14  Aligned_cols=236  Identities=17%  Similarity=0.107  Sum_probs=194.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |+|||||||||||++++++|+++|++|++++|+........     ..+++++.+|+.|.+ +.+++++ |+|||+|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence            68999999999999999999999999999999765433221     256899999999999 8888888 9999999953


Q ss_pred             ----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh--
Q psy4233          99 ----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE--  166 (303)
Q Consensus        99 ----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~--  166 (303)
                          ....+...+++|+.++.++++++++.++++|||+||.++|+..      |+.|..|.++|+.+|..+|++++.+  
T Consensus        74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~  153 (312)
T 3ko8_A           74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYAR  153 (312)
T ss_dssp             SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence                3345667889999999999999999999999999999999763      4456677899999999999988774  


Q ss_pred             --CCCEEEEeecceeeCCCchhhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC---CCCCCcEEE
Q psy4233         167 --FPEATIFRPSDMYGSGDKFLRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD---PDAAGKIYQ  238 (303)
Q Consensus       167 --~~~~~ilrp~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~---~~~~g~~~~  238 (303)
                        +++++++||+++|||+... ..+..++..   ....+.+++++.+. ++|+|++|+|++++.++++   +...+++||
T Consensus       154 ~~g~~~~~lrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~n  231 (312)
T 3ko8_A          154 LFGVRCLAVRYANVVGPRLRH-GVIYDFIMKLRRNPNVLEVLGDGTQR-KSYLYVRDAVEATLAAWKKFEEMDAPFLALN  231 (312)
T ss_dssp             HHCCEEEEEEECEEECTTCCS-SHHHHHHHHHHHCTTEEEEC----CE-ECEEEHHHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred             HhCCCEEEEeeccccCcCCCC-ChHHHHHHHHHhCCCCeEEcCCCCeE-EeeEEHHHHHHHHHHHHHhccccCCCCcEEE
Confidence              8999999999999997542 222222222   23456678888787 8999999999999999986   445678999


Q ss_pred             EeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         239 AVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       239 i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++.+|+.|+++.+.+.+|.+..
T Consensus       232 i~~~~~~s~~e~~~~i~~~~g~~~~  256 (312)
T 3ko8_A          232 VGNVDAVRVLDIAQIVAEVLGLRPE  256 (312)
T ss_dssp             ESCSSCEEHHHHHHHHHHHHTCCCE
T ss_pred             EcCCCceeHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999998765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=8.7e-39  Score=274.90  Aligned_cols=228  Identities=14%  Similarity=0.095  Sum_probs=189.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-cCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-SNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~vi~~   94 (303)
                      |++|+||||| +||||++|+++|+++|++|++++|+....         .++++++.+|+.|.+++.+++++ +|+|||+
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   70 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYC   70 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence            4578999999 59999999999999999999999986531         14699999999999999999998 9999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhhCC
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLREFP  168 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~~~  168 (303)
                      |+... ..+..++++|+.++.+++++|++.++++|||+||.++|+.      .|+.|..|.++|+.+|..+|++ +.+ +
T Consensus        71 a~~~~-~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~  147 (286)
T 3gpi_A           71 VAASE-YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-Y  147 (286)
T ss_dssp             HHHHH-HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-S
T ss_pred             CCCCC-CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-C
Confidence            98742 4456788999999999999999999999999999999986      3455677889999999999999 888 9


Q ss_pred             CEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         169 EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       169 ~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +++++||+++|||+..  ..+..+.  .   ....+.+... ++|+|++|+|++++.+++++  ...+++||+++++.+|
T Consensus       148 ~~~ilR~~~v~G~~~~--~~~~~~~--~---~~~~~~~~~~-~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s  219 (286)
T 3gpi_A          148 SSTILRFSGIYGPGRL--RMIRQAQ--T---PEQWPARNAW-TNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP  219 (286)
T ss_dssp             SEEEEEECEEEBTTBC--HHHHHTT--C---GGGSCSSBCE-ECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE
T ss_pred             CeEEEecccccCCCch--hHHHHHH--h---cccCCCcCce-eEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCC
Confidence            9999999999999865  2222221  1   2233556666 89999999999999999874  4557899999999999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q psy4233         247 LSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       247 ~~e~~~~i~~~~g~~~~~  264 (303)
                      +.|+++.+++.+|.+.++
T Consensus       220 ~~e~~~~i~~~~g~~~~~  237 (286)
T 3gpi_A          220 VHDLLRWLADRQGIAYPA  237 (286)
T ss_dssp             HHHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHcCCCCCC
Confidence            999999999999998764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=7.4e-38  Score=273.33  Aligned_cols=236  Identities=13%  Similarity=0.080  Sum_probs=196.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      .+|+|||||||||||++++++|+++|++|++++|+...  ..+       +++++.+|++|++++.+++++  +|+|||+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~~l-------~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   81 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA--KLP-------NVEMISLDIMDSQRVKKVISDIKPDYIFHL   81 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC--CCT-------TEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc--ccc-------eeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence            46899999999999999999999999999999997653  111       589999999999999999987  9999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCC--------CCCCCCCCCchhHHHHHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNP--------PTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~--------~~~~~~~~~~y~~~K~~~e~  161 (303)
                      |+...    ...+...+++|+.++.+++++|++. ++++||++||..+|+..        |+.|..+.++|+.+|..+|+
T Consensus        82 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  161 (321)
T 2pk3_A           82 AAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGM  161 (321)
T ss_dssp             CSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHH
T ss_pred             CcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            99743    2356778999999999999999876 58899999999998753        44456778899999999999


Q ss_pred             HHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--h---h--cceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         162 EVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--V---F--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       162 ~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~---~--~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      +++.+    +++++++||+++|||+......+..++..  .   +  ..+..++++... ++|++++|+|++++.+++++
T Consensus       162 ~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~v~v~Dva~a~~~~~~~~  240 (321)
T 2pk3_A          162 LARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV-RDFTDVRDIVQAYWLLSQYG  240 (321)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCE-EEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcE-EeeEEHHHHHHHHHHHHhCC
Confidence            99875    89999999999999976532233333322  2   3  356677777777 89999999999999999865


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                       ..|++||+++++.+|+.|+++.+.+.+|.+..
T Consensus       241 -~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  272 (321)
T 2pk3_A          241 -KTGDVYNVCSGIGTRIQDVLDLLLAMANVKID  272 (321)
T ss_dssp             -CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCE
T ss_pred             -CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCc
Confidence             45789999999999999999999999998755

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.1e-37  Score=271.27  Aligned_cols=237  Identities=17%  Similarity=0.113  Sum_probs=193.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~   96 (303)
                      |+|||||||||||++++++|+++|++|++++|........+.     .+++++.+|++|++++.++++  ++|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-----KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-----TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-----cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            589999999999999999999999999999985433222111     358899999999999999998  7999999998


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC-ccCCC-------CCCCCCCCCCchhHHHHHHHHHHH
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISAL-NADPN-------PPTYYISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~-------~~~~~~~~~~~y~~~K~~~e~~~~  164 (303)
                      ....    ..+...+++|+.++.+++++|++.+++++|++||. .+|+.       .|+.|..+.++|+.+|..+|++++
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  155 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLS  155 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Confidence            6432    34567889999999999999999999999999998 77754       234455677899999999999987


Q ss_pred             h----hCCCEEEEeecceeeCCCch---hhHHHHHHHh--hhcceeee-----cCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         165 R----EFPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFRKLAVY-----KKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       165 ~----~~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .    .+++++++||+++|||+...   ...+..++..  .+..+.++     +++.+. ++|+|++|+|++++.+++++
T Consensus       156 ~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          156 VYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCV-RDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCE-ECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeE-EeeEEHHHHHHHHHHHHhCC
Confidence            5    48999999999999997532   1223333332  34455566     777777 89999999999999999754


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                         +++||+++++.+|+.|+++.+++.+|.+.++
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  265 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEV  265 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCE
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCc
Confidence               7799999999999999999999999987653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=276.90  Aligned_cols=261  Identities=15%  Similarity=0.125  Sum_probs=200.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      +++||+|||||||||||++|+++|+++|+      +... .         ...++++.+|+.|++++.+++++  +|+||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-~---------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-D---------WVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-E---------EEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-c---------ccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            46789999999999999999999999998      2111 0         02355668999999999999988  99999


Q ss_pred             EccccCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC----------CCCCCC-chhHHH
Q psy4233          93 NLIGREF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY----------YISGGS-QFYRTK  156 (303)
Q Consensus        93 ~~a~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~----------~~~~~~-~y~~~K  156 (303)
                      |+|+...     ...+...+++|+.++.+++++|++.++++|||+||.++|+.....          +..|.+ +|+.+|
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  146 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAK  146 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHH
Confidence            9999743     345667899999999999999999999999999999999864332          334444 599999


Q ss_pred             HHHHHHHHh----hCCCEEEEeecceeeCCCch-------hh-HHHHHHH--hhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         157 YQGEKEVLR----EFPEATIFRPSDMYGSGDKF-------LR-YYGHMWR--HVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       157 ~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~-------~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..+|++++.    .+++++++||+++|||+...       .. .+..++.  ..+..+++++++.+. ++|+|++|+|++
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a  225 (319)
T 4b8w_A          147 RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR-RQFIYSLDLAQL  225 (319)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE-ECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee-EEEEeHHHHHHH
Confidence            999998876    48999999999999997642       11 1222211  156677888888888 899999999999


Q ss_pred             HHHHhcCC-CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         223 IVAACKDP-DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       223 ~~~~~~~~-~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      ++.+++++ ...+++||+++++.+|+.|+++.+.+.+|.+..+ +.+.....+ .........+.+.++|.|.
T Consensus       226 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-~~~~~d~~k~~~~lg~~p~  297 (319)
T 4b8w_A          226 FIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQ-FKKTASNSKLRTYLPDFRF  297 (319)
T ss_dssp             HHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCC-SCCCBCCHHHHHHCTTCCC
T ss_pred             HHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCc-ccccCCHHHHHHhcCCCCC
Confidence            99999864 3456799999999999999999999999988664 222211111 1223333455566676665

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2e-37  Score=276.80  Aligned_cols=241  Identities=15%  Similarity=0.137  Sum_probs=198.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +.+||+|||||||||||++++++|+++|++|++++|+....... .    ..+++++.+|+.|.+++.++++++|+|||+
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-D----MFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-G----GTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-c----cCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            34578999999999999999999999999999999976443221 1    146899999999999999999999999999


Q ss_pred             cccCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC-----------CC--CCCCCCchhHHH
Q psy4233          95 IGREF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP-----------TY--YISGGSQFYRTK  156 (303)
Q Consensus        95 a~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-----------~~--~~~~~~~y~~~K  156 (303)
                      |+...     ...+...+++|+.++.++++++++.++++|||+||.++|+...           +.  +..+.+.|+.+|
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK  180 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  180 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHH
Confidence            99643     3456778999999999999999999999999999999987421           11  445678999999


Q ss_pred             HHHHHHHHh----hCCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcc-eeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         157 YQGEKEVLR----EFPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRK-LAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       157 ~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      ..+|++++.    .+++++++||+++|||+....    ..+..++..  .+.. +++++++.+. ++|+|++|+|++++.
T Consensus       181 ~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~i~v~Dva~ai~~  259 (379)
T 2c5a_A          181 LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT-RSFTFIDECVEGVLR  259 (379)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCE-ECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCee-EEEEEHHHHHHHHHH
Confidence            999998865    389999999999999975421    122223322  2333 7778888777 899999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++  .+++||+++++.+|+.|+++.+++.+|.+.+
T Consensus       260 ~l~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  295 (379)
T 2c5a_A          260 LTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP  295 (379)
T ss_dssp             HHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred             Hhhcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence            99865  4679999999999999999999999998765

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.2e-38  Score=276.40  Aligned_cols=234  Identities=16%  Similarity=0.154  Sum_probs=189.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc---ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY---DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +++|+|||||||||||++++++|+++|++|++++|+...   ....+.......+++++.+|+.          ++|+||
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi   74 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY   74 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence            457899999999999999999999999999999997652   2222221112244666666654          899999


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+|+...    ...+...++ |+.++.+++++|++.++++|||+||.++|+..      |+.|..|.+.|+.+|..+|++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            9999643    245556777 99999999999999999999999999998763      455667789999999999999


Q ss_pred             HHhh----CC-CEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233         163 VLRE----FP-EATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK  235 (303)
Q Consensus       163 ~~~~----~~-~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  235 (303)
                      ++.+    ++ +++++||+++|||+......+..++..  .++.+++++++.+. ++|+|++|+|++++.+++++.. | 
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~Dva~~~~~~~~~~~~-g-  230 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQR-RDFTYITDVVDKLVALANRPLP-S-  230 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCE-ECEEEHHHHHHHHHHGGGSCCC-S-
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCce-EceEEHHHHHHHHHHHHhcCCC-C-
Confidence            9874    78 999999999999986543334443333  56677888888887 8999999999999999997655 7 


Q ss_pred             EEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         236 IYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       236 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +||+++++.+|+.|+++.++ .+|.+..+
T Consensus       231 ~~~i~~~~~~s~~e~~~~i~-~~g~~~~~  258 (321)
T 3vps_A          231 VVNFGSGQSLSVNDVIRILQ-ATSPAAEV  258 (321)
T ss_dssp             EEEESCSCCEEHHHHHHHHH-TTCTTCEE
T ss_pred             eEEecCCCcccHHHHHHHHH-HhCCCCcc
Confidence            99999999999999999999 99987653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=6.5e-38  Score=272.81  Aligned_cols=236  Identities=16%  Similarity=0.156  Sum_probs=193.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||+|||||||||||++|+++|+++| .++++++......+..     ..+++++.+|+.| +++.++++++|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDYLKGAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHHhcCCCEEEECCCC
Confidence            5799999999999999999999999 5555555443332221     2469999999999 8899999999999999985


Q ss_pred             C----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh-
Q psy4233          98 E----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE-  166 (303)
Q Consensus        98 ~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~-  166 (303)
                      .    ....+...+++|+.++.++++++++.++++|||+||.++|+..      |+.|..+.++|+.+|..+|.+++.+ 
T Consensus        74 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  153 (313)
T 3ehe_A           74 PDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYC  153 (313)
T ss_dssp             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            3    2355678899999999999999999999999999999999753      3456677889999999999998763 


Q ss_pred             ---CCCEEEEeecceeeCCCchhhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEe
Q psy4233         167 ---FPEATIFRPSDMYGSGDKFLRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV  240 (303)
Q Consensus       167 ---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~  240 (303)
                         +++++++||+++|||+... ..+..++..   ....+.+++++.+. ++|+|++|+|++++.+++ +...+++||++
T Consensus       154 ~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a~~~~~~-~~~~~~~~ni~  230 (313)
T 3ehe_A          154 HTFDMQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEILGNGEQN-KSYIYISDCVDAMLFGLR-GDERVNIFNIG  230 (313)
T ss_dssp             HHTTCEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEESTTSCCE-ECCEEHHHHHHHHHHHTT-CCSSEEEEECC
T ss_pred             HhcCCCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEeCCCCeE-EeEEEHHHHHHHHHHHhc-cCCCCceEEEC
Confidence               8999999999999997653 222222222   22456678888888 899999999999999998 44557899999


Q ss_pred             CCcccCHHHHHHHHHHHhcCCCC
Q psy4233         241 GPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       241 ~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++|+.|+++.+++.+|.+..
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~~  253 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSPR  253 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCCE
T ss_pred             CCCCeeHHHHHHHHHHHhCCCCc
Confidence            99999999999999999998765

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-38  Score=277.48  Aligned_cols=246  Identities=16%  Similarity=0.178  Sum_probs=195.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      ||+|||||||||||++++++|+++|++|++++|...... .........++++++.+|++|++++.+++++  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            579999999999999999999999999999998542211 1111111124589999999999999999998  9999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCCC----------------------CCCCCC
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPNP----------------------PTYYIS  147 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~----------------------~~~~~~  147 (303)
                      |+....    ..+...+++|+.++.+++++|++.+++ +|||+||.++|+..                      ++.+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            997432    356678999999999999999999886 99999999998742                      233455


Q ss_pred             CCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchh---hHHHHHHHh--hhc-----ceeeecCCCceeeCc
Q psy4233         148 GGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFL---RYYGHMWRH--VFR-----KLAVYKKGEETIKQP  213 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~---~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~  213 (303)
                      +.++|+.+|+.+|++++.+    +++++++||+++|||+....   ..+..++..  .+.     .+.+++++.+. ++|
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~  239 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV-RDV  239 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE-EEC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce-Eee
Confidence            6788999999999998874    89999999999999964311   122222221  233     56678888887 899


Q ss_pred             eeHHHHHHHHHHHhcC-CCCCCcEEEEeCCc--ccCHHHHHHHHHHHhcCCCCC
Q psy4233         214 VYVGDVAAAIVAACKD-PDAAGKIYQAVGPK--RYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~-~~~~g~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++++|+|++++.++++ +...|++||+++++  ++|+.|+++.+++.+|.+.++
T Consensus       240 i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~  293 (347)
T 1orr_A          240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF  293 (347)
T ss_dssp             EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCE
T ss_pred             EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCc
Confidence            9999999999999985 23467899999987  499999999999999987653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.3e-37  Score=274.75  Aligned_cols=246  Identities=18%  Similarity=0.168  Sum_probs=193.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc------ccccchhcC--CCCceEEEecCCCCHHHHHHHhc--c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY------DVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK--Y   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~------~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--~   87 (303)
                      +|+|||||||||||++++++|+++|++|++++|....      ..+......  ...+++++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5799999999999999999999999999999986433      111111000  01468999999999999999998  7


Q ss_pred             cCEEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCC-CCchhHHH
Q psy4233          88 SNVVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISG-GSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~-~~~y~~~K  156 (303)
                      +|+|||+|+...    ...+...+++|+.++.++++++++.++++|||+||.++|+..      |+.|..| .++|+.+|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            999999999643    235567889999999999999999999999999999998752      3445455 78999999


Q ss_pred             HHHHHHHHhh---C--CCEEEEeecceeeCCC------c----hhhHHHHHHHh---hhcceeeec------CCCceeeC
Q psy4233         157 YQGEKEVLRE---F--PEATIFRPSDMYGSGD------K----FLRYYGHMWRH---VFRKLAVYK------KGEETIKQ  212 (303)
Q Consensus       157 ~~~e~~~~~~---~--~~~~ilrp~~~~G~~~------~----~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~  212 (303)
                      ..+|++++.+   +  ++++++||+++|||..      .    ....+..++..   ....+.+++      ++.+. ++
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~  240 (348)
T 1ek6_A          162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RD  240 (348)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE-EC
T ss_pred             HHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceE-Ee
Confidence            9999998874   4  8999999999999842      0    01222222221   344566666      45566 89


Q ss_pred             ceeHHHHHHHHHHHhcCCC-CCC-cEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         213 PVYVGDVAAAIVAACKDPD-AAG-KIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~~-~~g-~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+|++|+|++++.+++++. ..+ ++||+++++.+|+.|+++.+++.+|.+.+.
T Consensus       241 ~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  294 (348)
T 1ek6_A          241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPY  294 (348)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             eEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCce
Confidence            9999999999999997642 334 799999999999999999999999987653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=3.7e-37  Score=272.84  Aligned_cols=246  Identities=12%  Similarity=0.087  Sum_probs=194.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~   93 (303)
                      +++|+|||||||||||++++++|+++|++|++++|+...............+++++.+|+.|++++.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            457899999999999999999999999999999997654322221111124689999999999999999987  899999


Q ss_pred             ccccCc----cccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHH
Q psy4233          94 LIGREF----ATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~  161 (303)
                      +|+...    ...+...+++|+.++.+++++|++.+ +++|||+||.++|+..       |+.+..+.++|+.+|..+|+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            999532    24556788999999999999999887 8899999999998753       33355677899999999999


Q ss_pred             HHHhh-------------CCCEEEEeecceeeCCCch-hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         162 EVLRE-------------FPEATIFRPSDMYGSGDKF-LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       162 ~~~~~-------------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +++.+             +++++++||+.+|||+... ...+..++..  .+..+. ++++... ++|+|++|+|++++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~~~v~v~Dva~a~~~  244 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI-IRNPHAI-RPWQHVLEPLSGYLL  244 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-CSCTTCE-ECCEETHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-ECCCCCe-eccEeHHHHHHHHHH
Confidence            98764             8999999999999997531 1233333332  333443 3445555 899999999999999


Q ss_pred             HhcC----CCCCCcEEEEeCC--cccCHHHHHHHHHHHhcCCCC
Q psy4233         226 ACKD----PDAAGKIYQAVGP--KRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       226 ~~~~----~~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++    +...+++||++++  +.+|+.|+++.+++.+|.+..
T Consensus       245 ~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~  288 (357)
T 1rkx_A          245 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS  288 (357)
T ss_dssp             HHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred             HHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCc
Confidence            8874    2245679999984  679999999999999998765

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.7e-37  Score=269.92  Aligned_cols=234  Identities=12%  Similarity=0.086  Sum_probs=185.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +|+|||||||||||++++++|+++|++|++++|+.... +.+.    ..+++++.+|+.|.+++.++++++|+|||+|+.
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI-QRLA----YLEPECRVAEMLDHAGLERALRGLDGVIFSAGY   87 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG-GGGG----GGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh-hhhc----cCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence            46999999999999999999999999999999976432 2111    136899999999999999999999999999996


Q ss_pred             Cc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCC----CCchhHHHHHHHHHHH
Q psy4233          98 EF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISG----GSQFYRTKYQGEKEVL  164 (303)
Q Consensus        98 ~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~----~~~y~~~K~~~e~~~~  164 (303)
                      ..  ...+...+++|+.++.+++++|++.++++|||+||.++|+..       |+.|..|    .++|+.+|..+|++++
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~  167 (342)
T 2x4g_A           88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAR  167 (342)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHH
Confidence            43  345677899999999999999999999999999999998653       3445566    7899999999999988


Q ss_pred             hh---CCCEEEEeecceeeCCC-ch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         165 RE---FPEATIFRPSDMYGSGD-KF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       165 ~~---~~~~~ilrp~~~~G~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      .+   +++++++||+.+|||+. .. ...+...+. .+...++   +.+. ++|+|++|+|++++.+++++.. |++||+
T Consensus       168 ~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~---~~~~-~~~i~v~Dva~~~~~~~~~~~~-g~~~~v  241 (342)
T 2x4g_A          168 EQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIG-NGEMTHY---VAGQ-RNVIDAAEAGRGLLMALERGRI-GERYLL  241 (342)
T ss_dssp             HHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHH-TTCCCEE---ECCE-EEEEEHHHHHHHHHHHHHHSCT-TCEEEE
T ss_pred             HHhhcCCcEEEEeCCceECCCCccccHHHHHHHHH-cCCCccc---cCCC-cceeeHHHHHHHHHHHHhCCCC-CceEEE
Confidence            74   89999999999999976 31 122222121 2333333   3444 7899999999999999987655 889999


Q ss_pred             eCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         240 VGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       240 ~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++ +|+.|+++.+.+.+|.+..
T Consensus       242 ~~~~-~s~~e~~~~i~~~~g~~~~  264 (342)
T 2x4g_A          242 TGHN-LEMADLTRRIAELLGQPAP  264 (342)
T ss_dssp             CCEE-EEHHHHHHHHHHHHTCCCC
T ss_pred             cCCc-ccHHHHHHHHHHHhCCCCC
Confidence            9999 9999999999999998865

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.1e-37  Score=269.35  Aligned_cols=228  Identities=14%  Similarity=0.127  Sum_probs=187.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~   93 (303)
                      |++|+|||||||||||++++++|+++|++|++++|+.                   .+|+.|.+++.++++  ++|+|||
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            3468999999999999999999999999999988752                   368999999999998  8999999


Q ss_pred             ccccCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC------CC----CCCCC-CchhHHHH
Q psy4233          94 LIGREF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP------TY----YISGG-SQFYRTKY  157 (303)
Q Consensus        94 ~a~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~------~~----~~~~~-~~y~~~K~  157 (303)
                      +|+...     ...+...+++|+.++.+++++|++.++++|||+||.++|+...      +.    +..|. ++|+.+|.
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~  141 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKI  141 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHH
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHH
Confidence            999753     2355678899999999999999999999999999999997532      11    23332 48999999


Q ss_pred             HHHHHHHhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--h----h-cceeeecCCCceeeCceeHHHHHHH
Q psy4233         158 QGEKEVLRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--V----F-RKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~----~-~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .+|++++.+    +++++++||+++|||+....    ..+..++..  .    + ..+.+++++.+. ++|+|++|+|++
T Consensus       142 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~-~~~i~v~Dva~~  220 (321)
T 1e6u_A          142 AGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM-REFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE-ECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEE-EEeEEHHHHHHH
Confidence            999998874    89999999999999976421    222333322  1    1 466777887777 899999999999


Q ss_pred             HHHHhcCCCCC--------CcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         223 IVAACKDPDAA--------GKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       223 ~~~~~~~~~~~--------g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++.+++++...        +++||+++++.+|+.|+++.+++.+|.+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  269 (321)
T 1e6u_A          221 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR  269 (321)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred             HHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            99999875432        579999999999999999999999998765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.5e-36  Score=267.56  Aligned_cols=241  Identities=15%  Similarity=0.123  Sum_probs=189.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+++|+|||||||||||++++++|+++|++|++++|........+..+....+++++.+|+.|..     +.++|+|||+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEEC
Confidence            35678999999999999999999999999999999975433222222222356899999998763     5789999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC------C-----CCCCCCCchhHHHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP------T-----YYISGGSQFYRTKYQG  159 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~------~-----~~~~~~~~y~~~K~~~  159 (303)
                      |+...    ...+...+++|+.++.+++++|++.++ ++||+||.++|+...      +     .|..+.+.|+.+|..+
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            99643    235567889999999999999999887 999999999987532      1     2445567799999999


Q ss_pred             HHHHHh----hCCCEEEEeecceeeCCCch--hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         160 EKEVLR----EFPEATIFRPSDMYGSGDKF--LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       160 e~~~~~----~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      |++++.    .+++++++||+.+|||+...  ...+..++..  .++.+.+++++.+. ++|++++|+|++++.+++.+.
T Consensus       178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~Dva~a~~~~~~~~~  256 (343)
T 2b69_A          178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT-RAFQYVSDLVNGLVALMNSNV  256 (343)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE-EECEEHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeE-EeeEeHHHHHHHHHHHHhcCC
Confidence            998865    38999999999999996431  1222222222  45567778888777 899999999999999997543


Q ss_pred             CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         232 AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       232 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                        +++||+++++.+|+.|+++.+++.+|.+..+
T Consensus       257 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  287 (343)
T 2b69_A          257 --SSPVNLGNPEEHTILEFAQLIKNLVGSGSEI  287 (343)
T ss_dssp             --CSCEEESCCCEEEHHHHHHHHHHHHTCCCCE
T ss_pred             --CCeEEecCCCCCcHHHHHHHHHHHhCCCCCc
Confidence              6699999999999999999999999987653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2e-36  Score=265.84  Aligned_cols=244  Identities=13%  Similarity=0.023  Sum_probs=194.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      .++|+|||||||||||++++++|+++|++|++++|+..... ..+......++++++.+|+.|.+++.+++++  +|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            34789999999999999999999999999999999764321 1111111124689999999999999999986  69999


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGV-EKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~  161 (303)
                      |+|+...    ...+...+++|+.++.++++++++.++ ++||++||.++|+.      .|+.|..|.++|+.+|..+|.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  171 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence            9999643    245667899999999999999999986 89999999999875      344566778899999999999


Q ss_pred             HHHhh----CCCEEEEeecceeeCCCch---hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         162 EVLRE----FPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       162 ~~~~~----~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      +++.+    +++++++||+.+|||+...   ...+..++..  .+. ....++++.+. ++|+|++|+|++++.+++++.
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~-~~~i~v~Dva~a~~~~~~~~~  250 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK-RDWGFAGDYVEAMWLMLQQDK  250 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE-EECEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcce-eceEEHHHHHHHHHHHHhcCC
Confidence            98764    8999999999999996532   1223333322  222 33356777777 899999999999999998654


Q ss_pred             CCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         232 AAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       232 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                        +++||+++++.+|+.|+++.+++.+|.+.
T Consensus       251 --~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          251 --ADDYVVATGVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             --CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             --CCEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence              46999999999999999999999999863

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=9.5e-37  Score=273.94  Aligned_cols=246  Identities=16%  Similarity=0.120  Sum_probs=193.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH-hCCCeEEEeecCCCcc--------cccch----hc-CC--CCc---eEEEecCCCCH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLG-KQGSQIIIPYRGNFYD--------VRDLR----LC-GD--LGQ---VLFQPYHPRND   78 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~--------~~~~~----~~-~~--~~~---~~~~~~Dl~d~   78 (303)
                      +|+|||||||||||++++++|+ ++|++|++++|+....        .+.+.    .. ..  ..+   ++++.+|+.|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 9999999999975432        11111    00 00  124   89999999999


Q ss_pred             HHHHHHhc--c-cCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC----------
Q psy4233          79 DEIRKAIK--Y-SNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP----------  141 (303)
Q Consensus        79 ~~~~~~~~--~-~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~----------  141 (303)
                      +++.++++  + +|+|||+|+....    ..+...+++|+.++.++++++++.++++|||+||.++|+..          
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999988  6 9999999997532    35567899999999999999999999999999999998643          


Q ss_pred             ---CCCCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCc---------hhhHHHHHH-----Hh-hh--
Q psy4233         142 ---PTYYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDK---------FLRYYGHMW-----RH-VF--  197 (303)
Q Consensus       142 ---~~~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~---------~~~~~~~~~-----~~-~~--  197 (303)
                         |+.+..+.++|+.+|..+|.+++.+    +++++++||+++|||+..         ....+..++     .. .+  
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence               2334456789999999999998774    899999999999998631         112333222     11 22  


Q ss_pred             ----------cceeeec------CCCceeeCceeHHHHHHHHHHHhcCCCCC-----C---cEEEEeCCcccCHHHHHHH
Q psy4233         198 ----------RKLAVYK------KGEETIKQPVYVGDVAAAIVAACKDPDAA-----G---KIYQAVGPKRYLLSELLDW  253 (303)
Q Consensus       198 ----------~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-----g---~~~~i~~~~~~s~~e~~~~  253 (303)
                                ..+++++      ++.+. ++|||++|+|++++.+++++...     +   ++||+++++.+|+.|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  320 (397)
T 1gy8_A          242 LTIHEDASTDKRMPIFGTDYPTPDGTCV-RDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV  320 (397)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCE-ECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred             cccccccccCCCceeecCcccCCCCCee-EeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHH
Confidence                      2466666      55666 89999999999999998753322     3   7999999999999999999


Q ss_pred             HHHHhcCCCCC
Q psy4233         254 FHVVMKKGEPD  264 (303)
Q Consensus       254 i~~~~g~~~~~  264 (303)
                      +.+.+|.+.++
T Consensus       321 i~~~~g~~~~~  331 (397)
T 1gy8_A          321 ARKTTGHPIPV  331 (397)
T ss_dssp             HHHHHCCCCCE
T ss_pred             HHHHhCCCCCe
Confidence            99999987653

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.3e-36  Score=265.02  Aligned_cols=239  Identities=13%  Similarity=0.090  Sum_probs=192.5

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCE
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNV   90 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~   90 (303)
                      ...+++|+|||||||||||++++++|+++|++|++++|+.....+..   ...++++++.+|++|.+++.++++  ++|+
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL---PPVAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS---CSCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh---hccCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            34567889999999999999999999999999999999654332111   112569999999999999999999  8999


Q ss_pred             EEEccccCccc--cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC--CC----CCCCchhHHHHHHHHH
Q psy4233          91 VINLIGREFAT--KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY--YI----SGGSQFYRTKYQGEKE  162 (303)
Q Consensus        91 vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~----~~~~~y~~~K~~~e~~  162 (303)
                      |||+|+.....  .... +++|+.++.++++++.+.++++||++||.++|+.....  |.    .+.+.|+.+|..+|++
T Consensus        92 vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~  170 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAF  170 (330)
T ss_dssp             EEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHH
T ss_pred             EEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHH
Confidence            99999975331  1122 78999999999999999999999999999998754221  11    2568999999999999


Q ss_pred             HHhhCCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHH-HHHHHhcCCCCCCcEEEEe
Q psy4233         163 VLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA-AIVAACKDPDAAGKIYQAV  240 (303)
Q Consensus       163 ~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~-~~~~~~~~~~~~g~~~~i~  240 (303)
                      ++.++++++++||+++|||+.. ...+..++.. ..+. ..++++. . +++++++|+|+ +++.+++++.  +++||++
T Consensus       171 ~~~~~~~~~~iR~~~v~gp~~~-~~~~~~~~~~~~~~~-~~~~~~~-~-~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~  244 (330)
T 2pzm_A          171 LMMSDVPVVSLRLANVTGPRLA-IGPIPTFYKRLKAGQ-KCFCSDT-V-RDFLDMSDFLAIADLSLQEGRP--TGVFNVS  244 (330)
T ss_dssp             HHTCSSCEEEEEECEEECTTCC-SSHHHHHHHHHHTTC-CCCEESC-E-ECEEEHHHHHHHHHHHTSTTCC--CEEEEES
T ss_pred             HHHcCCCEEEEeeeeeECcCCC-CCHHHHHHHHHHcCC-EEeCCCC-E-ecceeHHHHHHHHHHHHhhcCC--CCEEEeC
Confidence            9999999999999999999852 2223333222 1222 5556555 5 89999999999 9999998654  8899999


Q ss_pred             CCcccCHHHHHHHHHHHhcCC
Q psy4233         241 GPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       241 ~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +++.+|+.|+++.+++.+|.+
T Consensus       245 ~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          245 TGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             CSCCEEHHHHHHHHHHHHTCC
T ss_pred             CCCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999987

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.8e-36  Score=268.81  Aligned_cols=243  Identities=16%  Similarity=0.181  Sum_probs=197.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      |+|||||||||||++++++|+++ |++|++++|+.. ...+.+......++++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            58999999999999999999998 799999999652 222222211113569999999999999999998  79999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhc--CCc-------eEEEEecCccCCCC----------------CCCC
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEM--GVE-------KFIHISALNADPNP----------------PTYY  145 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-------~~v~~Ss~~~~~~~----------------~~~~  145 (303)
                      |+...    ...+...+++|+.++.+++++|.+.  +++       +||++||.++|+..                |+.|
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            99743    2356678999999999999999998  887       99999999988643                2335


Q ss_pred             CCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ..+.+.|+.+|..+|.+++.+    +++++++||+.+|||+......+..++..  .+..+++++++.+. ++|+|++|+
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dv  239 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI-RDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCE-EEEEEHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCcee-EeeEEHHHH
Confidence            567789999999999998774    89999999999999976432333333332  45567778888777 799999999


Q ss_pred             HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      |++++.+++++ ..|++||+++++.+|+.|+++.+++.+|.+.+
T Consensus       240 a~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~  282 (361)
T 1kew_A          240 ARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVP  282 (361)
T ss_dssp             HHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCcCc
Confidence            99999999754 45789999999999999999999999997643

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.7e-37  Score=264.67  Aligned_cols=236  Identities=14%  Similarity=0.151  Sum_probs=186.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |||||||||||||++|+++|+++||+|++++|++...           ++   .    ..+...+.++++|+|||+|+..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------~~---~----~~~~~~~~l~~~d~vihla~~~   62 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------RI---T----WDELAASGLPSCDAAVNLAGEN   62 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------EE---E----HHHHHHHCCCSCSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------ee---e----cchhhHhhccCCCEEEEeccCc
Confidence            7999999999999999999999999999999975321           11   1    1223345678899999999853


Q ss_pred             c--------cccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHH
Q psy4233          99 F--------ATKNFTIADANVEIPARLARLSKEMGVE--KFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        99 ~--------~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      .        ......+.+.|+.++.+|+++++..+.+  ++|+.||.++|+..      |+.|..+.+.|+..+...|..
T Consensus        63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH
Confidence            1        1223467889999999999999988754  68999999999863      455666667777777776665


Q ss_pred             HHh--hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEe
Q psy4233         163 VLR--EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV  240 (303)
Q Consensus       163 ~~~--~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~  240 (303)
                      ...  .+++++++||+.+|||+......+....  ..+....+|++.+. ++|||++|+|++++.+++++...| +||++
T Consensus       143 ~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~--~~~~~~~~g~g~~~-~~~ihv~Dva~a~~~~~~~~~~~g-~yn~~  218 (298)
T 4b4o_A          143 ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPF--RLGLGGPIGSGHQF-FPWIHIGDLAGILTHALEANHVHG-VLNGV  218 (298)
T ss_dssp             HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHH--HTTCCCCBTTSCSB-CCEEEHHHHHHHHHHHHHCTTCCE-EEEES
T ss_pred             HHhhccCCceeeeeeeeEEcCCCCchhHHHHHH--hcCCcceecccCce-eecCcHHHHHHHHHHHHhCCCCCC-eEEEE
Confidence            432  4789999999999999876555544443  33455567888888 899999999999999999876655 99999


Q ss_pred             CCcccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhh
Q psy4233         241 GPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN  285 (303)
Q Consensus       241 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~  285 (303)
                      +++++|+.|+++.+++.+|++..        +| +|.+.+...+.
T Consensus       219 ~~~~~t~~e~~~~ia~~lgrp~~--------~p-vP~~~~~~~~g  254 (298)
T 4b4o_A          219 APSSATNAEFAQTFGAALGRRAF--------IP-LPSAVVQAVFG  254 (298)
T ss_dssp             CSCCCBHHHHHHHHHHHHTCCCC--------CC-BCHHHHHHHHC
T ss_pred             CCCccCHHHHHHHHHHHhCcCCc--------cc-CCHHHHHHHhc
Confidence            99999999999999999999876        77 88887776544

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.7e-36  Score=260.50  Aligned_cols=219  Identities=15%  Similarity=0.105  Sum_probs=179.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +||+|||||| ||||++++++|+++|++|++++|+.... ..+..    .+++++.+|+.|.+     +.++|+|||+|+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~----~~~~~~~~D~~d~~-----~~~~d~vi~~a~   72 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM-EAIRA----SGAEPLLWPGEEPS-----LDGVTHLLISTA   72 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH-HHHHH----TTEEEEESSSSCCC-----CTTCCEEEECCC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh-hhHhh----CCCeEEEecccccc-----cCCCCEEEECCC
Confidence            4689999998 9999999999999999999999975432 22211    46999999999955     788999999999


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHh--cCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh-C
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKE--MGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE-F  167 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~-~  167 (303)
                      ......         ..+.++++++++  .++++|||+||.++|+..      |+.|..|.++|+.+|+.+|++++.+ +
T Consensus        73 ~~~~~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  143 (286)
T 3ius_A           73 PDSGGD---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPN  143 (286)
T ss_dssp             CBTTBC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTT
T ss_pred             cccccc---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcC
Confidence            754322         235689999998  788999999999999763      4556778889999999999999998 9


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCH
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~  247 (303)
                      ++++++||+++|||+......+   .  .+....+.++ .+. ++|+|++|+|++++.+++++. .+++||+++++.+|+
T Consensus       144 ~~~~ilRp~~v~G~~~~~~~~~---~--~~~~~~~~~~-~~~-~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~  215 (286)
T 3ius_A          144 LPLHVFRLAGIYGPGRGPFSKL---G--KGGIRRIIKP-GQV-FSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPP  215 (286)
T ss_dssp             CCEEEEEECEEEBTTBSSSTTS---S--SSCCCEEECT-TCC-BCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCH
T ss_pred             CCEEEEeccceECCCchHHHHH---h--cCCccccCCC-Ccc-cceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccH
Confidence            9999999999999986543221   1  3444555544 455 799999999999999999766 577999999999999


Q ss_pred             HHHHHHHHHHhcCCCC
Q psy4233         248 SELLDWFHVVMKKGEP  263 (303)
Q Consensus       248 ~e~~~~i~~~~g~~~~  263 (303)
                      .|+++.+++.+|.+.+
T Consensus       216 ~e~~~~i~~~~g~~~~  231 (286)
T 3ius_A          216 QDVIAYAAELQGLPLP  231 (286)
T ss_dssp             HHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHcCCCCC
Confidence            9999999999999865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=3e-36  Score=264.66  Aligned_cols=234  Identities=15%  Similarity=0.115  Sum_probs=187.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      .++||+|||||||||||++++++|+++|++|++++|+.....+.+..   .++++++.+|+.|.+++.+++++  +|+||
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence            35688999999999999999999999999999999975433222211   14689999999999999999988  99999


Q ss_pred             EccccCcc---ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC----CCCCCCC----CCC-CchhHHHHHHH
Q psy4233          93 NLIGREFA---TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP----NPPTYYI----SGG-SQFYRTKYQGE  160 (303)
Q Consensus        93 ~~a~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~----~~~~~~~----~~~-~~y~~~K~~~e  160 (303)
                      |+|+....   ..+ . +++|+.++.++++++.+.++++||++||.++|+    .... +.    .|. ++|+.+|..+|
T Consensus        95 h~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~~p~~~~Y~~sK~~~E  171 (333)
T 2q1w_A           95 HTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPRNPANSSYAISKSANE  171 (333)
T ss_dssp             ECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCCCCTTCHHHHHHHHHH
T ss_pred             ECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCCCCCCCchHHHHHHHH
Confidence            99997543   122 2 889999999999999999999999999999997    3211 11    455 79999999999


Q ss_pred             HHHHh-hCCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEE
Q psy4233         161 KEVLR-EFPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ  238 (303)
Q Consensus       161 ~~~~~-~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~  238 (303)
                      ++++. .. +++++||+++|||+.. ...+..++.. ..+. ++++ +... +++++++|+|++++.+++++.  +++||
T Consensus       172 ~~~~~s~~-~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~-~~~~-~~~~-~~~i~v~Dva~ai~~~~~~~~--g~~~~  244 (333)
T 2q1w_A          172 DYLEYSGL-DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGK-KCFV-TKAR-RDFVFVKDLARATVRAVDGVG--HGAYH  244 (333)
T ss_dssp             HHHHHHTC-CEEEEEESEEESTTCC-SSHHHHHHHHHHTTC-CCEE-EECE-ECEEEHHHHHHHHHHHHTTCC--CEEEE
T ss_pred             HHHHhhhC-CeEEEeeceEECcCCc-CcHHHHHHHHHHcCC-eeeC-CCce-EeeEEHHHHHHHHHHHHhcCC--CCEEE
Confidence            99998 77 9999999999999832 1222223222 1222 4555 4555 799999999999999998755  78999


Q ss_pred             EeCCcccCHHHHHHHHHHHhcCC
Q psy4233         239 AVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       239 i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +++++.+|+.|+++.+++.+|.+
T Consensus       245 v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          245 FSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             CSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             eCCCCCccHHHHHHHHHHHhCCC
Confidence            99999999999999999999987

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.4e-36  Score=265.18  Aligned_cols=239  Identities=15%  Similarity=0.132  Sum_probs=191.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~D~vi~~a~   96 (303)
                      |+|||||||||||++++++|+++ |++|++++|+.......    ...++++++.+|+.|. +.+.++++++|+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            58999999999999999999998 89999999975432211    1125699999999984 678888999999999998


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC------C-------CCCCchhHHHHHH
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY------I-------SGGSQFYRTKYQG  159 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~------~-------~~~~~y~~~K~~~  159 (303)
                      ....    ..+...+++|+.++.+++++|++.+ +++||+||.++|+.....+      .       .+.+.|+.+|..+
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~  155 (345)
T 2bll_A           77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (345)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             ccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHH
Confidence            6432    3556788999999999999999988 8999999999987532211      1       2234799999999


Q ss_pred             HHHHHh----hCCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         160 EKEVLR----EFPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       160 e~~~~~----~~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |++++.    .+++++++||+.+|||+...        ...+..++..  .+..+.+++++.+. ++|+|++|+|++++.
T Consensus       156 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a~~~  234 (345)
T 2bll_A          156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK-RCFTDIRDGIEALYR  234 (345)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE-EECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEE-EEEEEHHHHHHHHHH
Confidence            999865    38999999999999997531        1233333332  45566677777777 899999999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCc-ccCHHHHHHHHHHHhcCCCC
Q psy4233         226 ACKDPD--AAGKIYQAVGPK-RYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++.  ..+++||+++++ .+|+.|+++.+++.+|.+..
T Consensus       235 ~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             HHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             HHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            998653  457899999986 89999999999999998754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-36  Score=260.41  Aligned_cols=219  Identities=16%  Similarity=0.112  Sum_probs=186.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~   96 (303)
                      |+|||||||||||++++++|+++|++|++++|.                    ++|+.|.+.+.++++  ++|+|||+|+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~~~d~vi~~a~   65 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEIRPHIIIHCAA   65 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhcCCCEEEECCc
Confidence            599999999999999999999999999999993                    378999999999998  5999999999


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ....    ..+...+++|+.++.+++++|++.++ |+||+||.++|+..      |+.|..|.++|+.+|..+|++++.+
T Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  144 (287)
T 3sc6_A           66 YTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKEL  144 (287)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            7432    46678999999999999999999998 79999999999763      4456678899999999999999999


Q ss_pred             CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         167 FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      +.+++++||+.+|||+.. +...+...+. .+..++++++  +. ++|+|++|+|++++.+++++.  +++||+++++.+
T Consensus       145 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~--~~-~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          145 HNKYFIVRTSWLYGKYGNNFVKTMIRLGK-EREEISVVAD--QI-GSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHT-TCSEEEEECS--CE-ECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             CCCcEEEeeeeecCCCCCcHHHHHHHHHH-cCCCeEeecC--cc-cCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            999999999999999654 2222222222 3455666643  55 799999999999999999765  669999999999


Q ss_pred             CHHHHHHHHHHHhcCCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+.|+++.+++.+|.+..+
T Consensus       219 s~~e~~~~i~~~~g~~~~~  237 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKVNV  237 (287)
T ss_dssp             EHHHHHHHHHHHHTCCCEE
T ss_pred             cHHHHHHHHHHHcCCCcce
Confidence            9999999999999987553

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3.6e-36  Score=270.72  Aligned_cols=245  Identities=16%  Similarity=0.144  Sum_probs=192.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc----------------cchhc--CCCCceEEEecCCCCH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR----------------DLRLC--GDLGQVLFQPYHPRND   78 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----------------~~~~~--~~~~~~~~~~~Dl~d~   78 (303)
                      .+++|||||||||||++++++|+++|++|++++|.......                .+...  ....+++++.+|+.|.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            57899999999999999999999999999999885332100                00000  0124689999999999


Q ss_pred             HHHHHHhcc--cCEEEEccccCcc----ccch---hhhhhhcchHHHHHHHHHhcCC-ceEEEEecCccCCCCC-----C
Q psy4233          79 DEIRKAIKY--SNVVINLIGREFA----TKNF---TIADANVEIPARLARLSKEMGV-EKFIHISALNADPNPP-----T  143 (303)
Q Consensus        79 ~~~~~~~~~--~D~vi~~a~~~~~----~~~~---~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~~~~~-----~  143 (303)
                      +++.+++++  +|+|||+|+....    ..+.   ..+++|+.++.+++++|++.++ ++||++||.++|+...     +
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~  169 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  169 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCcc
Confidence            999999988  9999999986422    1222   3778999999999999999887 5999999999987532     1


Q ss_pred             --------------CCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch-----------------hhH
Q psy4233         144 --------------YYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-----------------LRY  188 (303)
Q Consensus       144 --------------~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-----------------~~~  188 (303)
                                    .+..+.++|+.+|..+|++++.+    +++++++||+.+|||+...                 ...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  249 (404)
T 1i24_A          170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  249 (404)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence                          24566789999999999988764    8999999999999997531                 123


Q ss_pred             HHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC--cEEEEeCCcccCHHHHHHHHHHH---hcCC
Q psy4233         189 YGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG--KIYQAVGPKRYLLSELLDWFHVV---MKKG  261 (303)
Q Consensus       189 ~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g--~~~~i~~~~~~s~~e~~~~i~~~---~g~~  261 (303)
                      +..++..  .++.+.+++++.+. ++|+|++|+|++++.+++++...|  ++||+++ +++|+.|+++.+++.   +|.+
T Consensus       250 ~~~~~~~~~~g~~~~~~g~g~~~-~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~  327 (404)
T 1i24_A          250 LNRFCVQAAVGHPLTVYGKGGQT-RGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLD  327 (404)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCE-EEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHcCCeeEEeCCCCce-ECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCC
Confidence            3333332  45566678888777 899999999999999998765446  6999988 889999999999998   7776


Q ss_pred             CC
Q psy4233         262 EP  263 (303)
Q Consensus       262 ~~  263 (303)
                      .+
T Consensus       328 ~~  329 (404)
T 1i24_A          328 VK  329 (404)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.1e-36  Score=264.72  Aligned_cols=234  Identities=13%  Similarity=0.104  Sum_probs=190.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~   93 (303)
                      +|+|||||||||||++++++|+++  |++|++++|+.... . +.     ++++++.+|+.|.+++.++++  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-D-VV-----NSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-H-HH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-c-cc-----CCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            578999999999999999999999  89999999975442 1 11     247899999999999999998  7999999


Q ss_pred             ccccCc---cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHHHH
Q psy4233          94 LIGREF---ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        94 ~a~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      +|+...   ...+...+++|+.++.++++++++.+++++||+||.++|+..       |+.|..|.++|+.+|..+|+++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            998643   245667899999999999999999999999999999998752       3445567889999999999988


Q ss_pred             Hhh----CCCEEEEeecceeeCCCc----hhh-HHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC-
Q psy4233         164 LRE----FPEATIFRPSDMYGSGDK----FLR-YYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-  232 (303)
Q Consensus       164 ~~~----~~~~~ilrp~~~~G~~~~----~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-  232 (303)
                      +.+    +++++++||+.+|||...    ... ....+... ..+..+.++++.+. ++|+|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETK-MPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCC-EEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCce-eeeeeHHHHHHHHHHHHhCcccc
Confidence            764    899999999999996431    111 12222221 34556667777777 8999999999999999987543 


Q ss_pred             --CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         233 --AGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       233 --~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                        .+++||+++ +.+|+.|+++.+++.+|.
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCTT
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCCC
Confidence              247999986 889999999999999983

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.2e-36  Score=251.18  Aligned_cols=215  Identities=16%  Similarity=0.098  Sum_probs=171.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||+|||||||||||++++++|+++|++|++++|++......      .++++++.+|+.|.+++.++++++|+|||+|+.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence            68999999999999999999999999999999985433221      156999999999999999999999999999987


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCCCCCCCCchhHHHHHHHHHHHhh----CC
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTYYISGGSQFYRTKYQGEKEVLRE----FP  168 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~~~~~~~~y~~~K~~~e~~~~~~----~~  168 (303)
                      ....  ...+++|+.++.++++++++.++++||++||.+++...     ++.+..|.++|+.+|..+|.+++..    ++
T Consensus        78 ~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~  155 (227)
T 3dhn_A           78 GWNN--PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEI  155 (227)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred             CCCC--hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCc
Confidence            5322  23788999999999999999999999999999876432     2445567789999999999666553    78


Q ss_pred             CEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHH
Q psy4233         169 EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       169 ~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~  248 (303)
                      +++++||+.+|||+.......      .....++.. + .. ++|++++|+|++++.+++++...|++|+++++++.++.
T Consensus       156 ~~~ilrp~~v~g~~~~~~~~~------~~~~~~~~~-~-~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          156 DWVFFSPAADMRPGVRTGRYR------LGKDDMIVD-I-VG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             EEEEEECCSEEESCCCCCCCE------EESSBCCCC-T-TS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             cEEEEeCCcccCCCcccccee------ecCCCcccC-C-CC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence            999999999999975422111      222233322 2 22 68999999999999999998889999999999998876


Q ss_pred             H
Q psy4233         249 E  249 (303)
Q Consensus       249 e  249 (303)
                      +
T Consensus       227 ~  227 (227)
T 3dhn_A          227 H  227 (227)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=7.6e-36  Score=262.43  Aligned_cols=245  Identities=19%  Similarity=0.157  Sum_probs=187.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      |+|||||||||||++++++|+++|++|++++|......+......  ...+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            589999999999999999999999999999875332211111000  013588999999999999998874  9999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCC-CCchhHHHHHHHHHH
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISG-GSQFYRTKYQGEKEV  163 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~-~~~y~~~K~~~e~~~  163 (303)
                      ||....    ..+...+++|+.++.++++++++.++++||++||.++|+..      |+.+..+ .++|+.+|..+|+++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            986421    34556889999999999999999999999999999998753      3334333 678999999999998


Q ss_pred             Hhh-----CCCEEEEeecceeeCCC------c----hhhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHH
Q psy4233         164 LRE-----FPEATIFRPSDMYGSGD------K----FLRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDV  219 (303)
Q Consensus       164 ~~~-----~~~~~ilrp~~~~G~~~------~----~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dv  219 (303)
                      +.+     +++++++||+++|||..      .    ....+..+...   ....+.+++      +|.+. ++|+|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~i~v~Dv  239 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV-RDYIHVMDL  239 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE-ECEEEHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCcee-eeeEEHHHH
Confidence            763     68999999999999832      0    11122222221   233455554      44555 899999999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |++++.++++.  ...+++||+++++++|+.|+++.+++.+|.+.+.
T Consensus       240 a~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~  286 (338)
T 1udb_A          240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCE
T ss_pred             HHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcc
Confidence            99999988753  2223799999999999999999999999987653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=4.3e-36  Score=261.48  Aligned_cols=229  Identities=15%  Similarity=0.126  Sum_probs=164.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a   95 (303)
                      +|+|||||||||||++++++|+++|++|++++|+...           ++  ++.+|++|++++.+++++  +|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            5799999999999999999999999999999986432           12  678999999999998886  89999999


Q ss_pred             ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-----CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-----PPTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-----~~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      +...    ...+...+++|+.++.++++++++.++ ++||+||.++|+.     .|+.|..+.+.|+.+|..+|++++.+
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            9643    345667899999999999999999887 9999999999876     34555677889999999999999999


Q ss_pred             CCCEEEEeecceeeCCCc----hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC---CCCCcEEEE
Q psy4233         167 FPEATIFRPSDMYGSGDK----FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP---DAAGKIYQA  239 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i  239 (303)
                      +.+++++||+.+|||...    +...+...+...+..+.+.  +.+. +++++++|+|++++.+++++   ...+++||+
T Consensus       148 ~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          148 NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQ-RFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSB-BCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCce-ECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            999999999999999764    2222222221012233333  3445 79999999999999998753   345779999


Q ss_pred             eCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         240 VGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       240 ~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++.+|+.|+++.+++.+|.+..
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred             cCCCcccHHHHHHHHHHHhCCChh
Confidence            999999999999999999998754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-35  Score=254.84  Aligned_cols=219  Identities=17%  Similarity=0.166  Sum_probs=184.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      .++|||||||||||++++++|+++|++|++++|+                    .+|+.|.+++.++++  ++|+|||+|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            6799999999999999999999999999999985                    368999999999998  799999999


Q ss_pred             ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      +...    ...+...+++|+.++.++++++++.++ +|||+||.++|+..      |+.|..+.++|+.+|..+|++++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            9743    245667899999999999999999998 99999999998753      444556778999999999999999


Q ss_pred             hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         166 EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       166 ~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      ++.+++++||+.+|||+..+...+...+. .+..+.+.+  .+. +++++++|+|++++.+++++  .+++||+++++.+
T Consensus       151 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGDGNNFVKTMINLGK-THDELKVVH--DQV-GTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESSSSCHHHHHHHHHH-HCSEEEEES--SCE-ECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCCCcChHHHHHHHHh-cCCcEEeec--Cee-eCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            98899999999999994333332222222 334444554  344 79999999999999999865  5789999999999


Q ss_pred             CHHHHHHHHHHHhcCCCC
Q psy4233         246 LLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       246 s~~e~~~~i~~~~g~~~~  263 (303)
                      |+.|+++.+.+.+|.+..
T Consensus       225 s~~e~~~~i~~~~g~~~~  242 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDVK  242 (292)
T ss_dssp             EHHHHHHHHHHHHCCCCE
T ss_pred             cHHHHHHHHHHHhCCCCc
Confidence            999999999999998754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.4e-36  Score=259.53  Aligned_cols=222  Identities=18%  Similarity=0.164  Sum_probs=185.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+|||||||||||++++++|+ +|++|++++|+..                ++.+|+.|.+++.+++++  +|+|||+|+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~   63 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence            589999999999999999999 8999999999741                247899999999999987  999999999


Q ss_pred             cCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 REF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ...    ...+...+++|+.++.+++++|++.++ |+||+||.++|+..      |+.+..|.++|+.+|..+|++++.+
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  142 (299)
T 1n2s_A           64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (299)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence            643    346677899999999999999999988 89999999998753      4456677889999999999999999


Q ss_pred             CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CC-CCcEEEEeCC
Q psy4233         167 FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DA-AGKIYQAVGP  242 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~-~g~~~~i~~~  242 (303)
                      ..+++++||+++|||+.. +...+...+. .+..+.+++  .+. ++|+|++|+|++++.+++++  .. .+++||++++
T Consensus       143 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          143 CPKHLIFRTSWVYAGKGNNFAKTMLRLAK-ERQTLSVIN--DQY-GAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHH-HCSEEEEEC--SCE-ECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             CCCeEEEeeeeecCCCcCcHHHHHHHHHh-cCCCEEeec--Ccc-cCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            889999999999999764 2222222222 344455554  355 89999999999999999865  22 3779999999


Q ss_pred             cccCHHHHHHHHHHHhcCCC
Q psy4233         243 KRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       243 ~~~s~~e~~~~i~~~~g~~~  262 (303)
                      +.+|+.|+++.+++.+|.+.
T Consensus       219 ~~~s~~e~~~~i~~~~g~~~  238 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKAG  238 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=6.7e-36  Score=264.79  Aligned_cols=236  Identities=17%  Similarity=0.139  Sum_probs=190.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----ccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----YSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D   89 (303)
                      +++|+|||||||||||++|+++|+++| ++|++++|+.....  ...   ..+++ +.+|+.|.+.+..+++     ++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~---~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVN---LVDLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGG---TTTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhc---ccCce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            456899999999999999999999999 99999999754321  111   12334 7889999999999887     599


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHH
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~  161 (303)
                      +|||+|+...  ...+...+++|+.++.++++++++.++ +||++||.++|+..      |+.+..|.++|+.+|..+|+
T Consensus       118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  196 (357)
T 2x6t_A          118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDE  196 (357)
T ss_dssp             EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHH
T ss_pred             EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHH
Confidence            9999999753  345667899999999999999999999 99999999998753      33445667899999999999


Q ss_pred             HHHhh----CCCEEEEeecceeeCCCch----hhHHHHHHHh--hhcceeeecCCCc-eeeCceeHHHHHHHHHHHhcCC
Q psy4233         162 EVLRE----FPEATIFRPSDMYGSGDKF----LRYYGHMWRH--VFRKLAVYKKGEE-TIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       162 ~~~~~----~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      +++.+    +++++++||+++|||+...    ...+..++..  .+..+.+++++.+ . ++|++++|+|++++.+++++
T Consensus       197 ~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          197 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK-RDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             HHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCE-ECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcce-EccEEHHHHHHHHHHHHhcC
Confidence            99875    6899999999999997531    1233333332  4455667777776 6 89999999999999999865


Q ss_pred             CCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      .  +++||+++++.+|+.|+++.+++.+|.+
T Consensus       276 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          276 V--SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             C--CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             C--CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            5  7799999999999999999999999987

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=6.1e-35  Score=257.11  Aligned_cols=244  Identities=14%  Similarity=0.027  Sum_probs=194.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi   92 (303)
                      |++|+|||||||||||++++++|+++|++|++++|+..... ..+......++++++.+|++|.+++.+++++  +|+||
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            35689999999999999999999999999999999764321 1112111224689999999999999999986  69999


Q ss_pred             EccccCc----cccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHH
Q psy4233          93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGV-EKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~  161 (303)
                      |+|+...    ...+...+++|+.++.+++++|.+.++ ++||++||.++|+.      .++.+..+.++|+.+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            9999743    345677899999999999999999887 89999999999876      344566777899999999999


Q ss_pred             HHHhh----CCCEEEEeecceeeCCCch---hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         162 EVLRE----FPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       162 ~~~~~----~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      +++.+    +++++++|+.++|||+...   ...+..++..  .+. ....++++... ++|+|++|+|++++.+++++.
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAK-RDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE-ECCEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCce-eeeEEHHHHHHHHHHHHhCCC
Confidence            88764    7999999999999997532   1222222221  222 23356666666 899999999999999998654


Q ss_pred             CCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         232 AAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       232 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                        +++||+++++.+|+.|+++.+++.+|.+.
T Consensus       240 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  268 (345)
T 2z1m_A          240 --PDDYVIATGETHTVREFVEKAAKIAGFDI  268 (345)
T ss_dssp             --CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             --CceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence              36999999999999999999999999874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.6e-35  Score=269.52  Aligned_cols=248  Identities=16%  Similarity=0.138  Sum_probs=192.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhC---CCeEEEeecCCCcccccch--hc-C-------------CCCceEEEecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQ---GSQIIIPYRGNFYDVRDLR--LC-G-------------DLGQVLFQPYH   74 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~---g~~V~~~~R~~~~~~~~~~--~~-~-------------~~~~~~~~~~D   74 (303)
                      .+.++|+|||||||||||++++++|+++   |++|++++|+........+  .. .             ...+++++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4456899999999999999999999999   8999999998653211100  00 0             12579999999


Q ss_pred             CC------CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCC--
Q psy4233          75 PR------NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYI--  146 (303)
Q Consensus        75 l~------d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~--  146 (303)
                      ++      |.+.+.++++++|+|||+|+......+...+++|+.++.+++++|++.++++|||+||.++|+.....+.  
T Consensus       149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E  228 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTE  228 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCS
T ss_pred             CCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCC
Confidence            98      6778999999999999999986556667889999999999999999999999999999999876332221  


Q ss_pred             ----CCC-----------CchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCC-----chhhHHHHHHHh--hhcce
Q psy4233         147 ----SGG-----------SQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGD-----KFLRYYGHMWRH--VFRKL  200 (303)
Q Consensus       147 ----~~~-----------~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~-----~~~~~~~~~~~~--~~~~~  200 (303)
                          .+.           +.|+.+|+.+|.+++++    +++++++||+++||+..     ....++..++..  ..+..
T Consensus       229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~  308 (478)
T 4dqv_A          229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIA  308 (478)
T ss_dssp             SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEE
T ss_pred             cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcc
Confidence                111           34999999999999885    89999999999999843     223344444432  22233


Q ss_pred             eee--c---CC---CceeeCceeHHHHHHHHHHHhcC----CCCCCcEEEEeCCcc--cCHHHHHHHHHHHhcCCCC
Q psy4233         201 AVY--K---KG---EETIKQPVYVGDVAAAIVAACKD----PDAAGKIYQAVGPKR--YLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       201 ~~~--~---~~---~~~~~~~i~~~Dva~~~~~~~~~----~~~~g~~~~i~~~~~--~s~~e~~~~i~~~~g~~~~  263 (303)
                      |..  +   +|   ... ++++|++|+|++++.++.+    +...+++||+++++.  +|+.|+++.+.+. |.+..
T Consensus       309 P~~~~~~~~~G~~~~~~-~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~  383 (478)
T 4dqv_A          309 PRSFYEPDSEGNRQRAH-FDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIR  383 (478)
T ss_dssp             ESCSBCCCTTSCCCCCC-CCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCE
T ss_pred             cccccccccccccccce-eeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcc
Confidence            321  1   11   334 7999999999999999875    455678999999988  9999999999996 76654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-34  Score=257.81  Aligned_cols=241  Identities=15%  Similarity=-0.003  Sum_probs=192.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcC------CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCG------DLGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      |+|||||||||||++++++|+++|++|++++|+..... ..+....      ...+++++.+|+.|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999754311 1111110      124689999999999999999986  69


Q ss_pred             EEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPN------PPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K  156 (303)
                      +|||+|+....    ..+...+++|+.++.++++++++.++   ++||++||.++|+.      +|+.|..+.++|+.+|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            99999997432    35567889999999999999999887   79999999999875      2444566778999999


Q ss_pred             HHHHHHHHhh----CCCEEEEeecceeeCCCc--h-hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE----FPEATIFRPSDMYGSGDK--F-LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~--~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..+|.+++.+    +++++++||+.+|||+..  + ...+..++..  .+. ....++++.+. ++|+|++|+|++++.+
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~-~~~i~v~Dva~a~~~~  263 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK-RDWGHAKDYVEAMWLM  263 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE-ECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCce-eeeEEHHHHHHHHHHH
Confidence            9999988764    899999999999999643  2 1222333222  222 33456777777 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      ++++.  +++||+++++.+|+.|+++.+++.+|.+.
T Consensus       264 ~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  297 (375)
T 1t2a_A          264 LQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTI  297 (375)
T ss_dssp             HHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             HhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence            98654  36999999999999999999999999874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.7e-35  Score=252.24  Aligned_cols=220  Identities=16%  Similarity=0.112  Sum_probs=181.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |+|||||||||||++++++|+++  |++|++++|+.... ..+..    .+++++.+|++|++++.++++++|+|||+++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~----~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLAD----QGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHH----TTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhh----cCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            57999999999999999999998  99999999975432 21111    3589999999999999999999999999998


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeec
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS  176 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~  176 (303)
                      ....      .++|+.++.+++++|++.++++||++||.+++..        ..+|+.+|..+|++++..+++++++||+
T Consensus        76 ~~~~------~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--------~~~y~~~K~~~E~~~~~~~~~~~ilrp~  141 (287)
T 2jl1_A           76 PHYD------NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES--------IIPLAHVHLATEYAIRTTNIPYTFLRNA  141 (287)
T ss_dssp             CCSC------HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC--------CSTHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCcC------chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC--------CCchHHHHHHHHHHHHHcCCCeEEEECC
Confidence            6321      1568999999999999999999999999988631        2489999999999999999999999999


Q ss_pred             ceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233         177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       177 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  256 (303)
                      .++|+...  ..+...+.  .+.. ..+.+... ++|++++|+|++++.+++++...|++||+++++.+|+.|+++.+++
T Consensus       142 ~~~~~~~~--~~~~~~~~--~~~~-~~~~~~~~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  215 (287)
T 2jl1_A          142 LYTDFFVN--EGLRASTE--SGAI-VTNAGSGI-VNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSE  215 (287)
T ss_dssp             CBHHHHSS--GGGHHHHH--HTEE-EESCTTCC-BCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHH
T ss_pred             Eeccccch--hhHHHHhh--CCce-eccCCCCc-cCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHH
Confidence            98876411  22222222  2222 24455555 7999999999999999987655688999999999999999999999


Q ss_pred             HhcCCCC
Q psy4233         257 VMKKGEP  263 (303)
Q Consensus       257 ~~g~~~~  263 (303)
                      .+|.+.+
T Consensus       216 ~~g~~~~  222 (287)
T 2jl1_A          216 VSGKKVV  222 (287)
T ss_dssp             HHSSCCE
T ss_pred             HHCCcce
Confidence            9998865

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-36  Score=258.85  Aligned_cols=231  Identities=16%  Similarity=0.135  Sum_probs=175.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcc-----cCEEE
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-----SNVVI   92 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~D~vi   92 (303)
                      +|||||||||||++++++|+++| ++|++++|+.... ...+      ++++ +.+|+.|.+.+..++++     +|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH------HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc------Ccce-eccccccHHHHHHHHhccccCCCcEEE
Confidence            58999999999999999999999 9999999975432 1111      1233 78899999999999875     99999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHH
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~  164 (303)
                      |+|+...  ...+...+++|+.++.++++++++.++ ++|++||.++|+..      |+.+..|.++|+.+|..+|++++
T Consensus        74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  152 (310)
T 1eq2_A           74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR  152 (310)
T ss_dssp             ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred             ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9999753  345677899999999999999999999 99999999998753      33455677899999999999998


Q ss_pred             hh----CCCEEEEeecceeeCCCch----hhHHHHHHHh--hhcceeeecCCCc-eeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         165 RE----FPEATIFRPSDMYGSGDKF----LRYYGHMWRH--VFRKLAVYKKGEE-TIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       165 ~~----~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      .+    +++++++||+++|||+...    ...+..++..  .++.+.+++++.+ . ++|+|++|+|++++.+++++.  
T Consensus       153 ~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK-RDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C-BCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcce-EccEEHHHHHHHHHHHHhcCC--
Confidence            75    6899999999999997642    1233333332  4445566777776 6 899999999999999998665  


Q ss_pred             CcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         234 GKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       234 g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +++||+++++.+|+.|+++.+++.+|.+
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            7799999999999999999999999987

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-34  Score=255.04  Aligned_cols=242  Identities=12%  Similarity=-0.043  Sum_probs=189.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcC-----CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCG-----DLGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      ||+|||||||||||++++++|+++|++|++++|+.... .+.+....     ...+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999975431 11111110     024689999999999999999986  79


Q ss_pred             EEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPN------PPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K  156 (303)
                      +|||+|+...    ...+...+++|+.++.++++++++.++   ++||++||.++|+.      .|+.+..+.++|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            9999999643    234556789999999999999999987   79999999999875      3445566788999999


Q ss_pred             HHHHHHHHhh----CCCEEEEeecceeeCCCch---hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE----FPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      ..+|.+++.+    +++++++|++.+|||+...   ...+..++..  .+. ....++++.+. ++|+|++|+|++++.+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~-~~~i~v~Dva~a~~~~  239 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL-RDWGHAKDYVKMQWMM  239 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE-ECCEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCce-eeeeEHHHHHHHHHHH
Confidence            9999998764    8999999999999997532   1223333322  222 33456777777 8999999999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      ++++.  +++||+++++.+|+.|+++.+++.+|.+.
T Consensus       240 ~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  273 (372)
T 1db3_A          240 LQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKL  273 (372)
T ss_dssp             TSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred             HhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCc
Confidence            98654  46999999999999999999999999764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=9.9e-35  Score=278.49  Aligned_cols=250  Identities=17%  Similarity=0.132  Sum_probs=192.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc--ccC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK--YSN   89 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~D   89 (303)
                      +++++|+|||||||||||++++++|+++|++|++++|+...........  ....+++++.+|+.|++++.++++  ++|
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            3456789999999999999999999999999999999754322111100  012468899999999999999998  799


Q ss_pred             EEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC----------CCCCCCCCCCchhHH
Q psy4233          90 VVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN----------PPTYYISGGSQFYRT  155 (303)
Q Consensus        90 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~----------~~~~~~~~~~~y~~~  155 (303)
                      +|||+|+....    ..+...+++|+.++.+++++|++.++++||++||.++|+.          .|+.+..+.+.|+.+
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~s  166 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHT  166 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHH
Confidence            99999997432    2445688999999999999999999999999999999864          234455677899999


Q ss_pred             HHHHHHHHHh------hCCCEEEEeecceeeCCCc----------hhhHHHHHHHh---hhcceeeec------CCCcee
Q psy4233         156 KYQGEKEVLR------EFPEATIFRPSDMYGSGDK----------FLRYYGHMWRH---VFRKLAVYK------KGEETI  210 (303)
Q Consensus       156 K~~~e~~~~~------~~~~~~ilrp~~~~G~~~~----------~~~~~~~~~~~---~~~~~~~~~------~~~~~~  210 (303)
                      |..+|++++.      .+++++++||+.+|||...          ....+..+...   ....+.+++      ++.+. 
T Consensus       167 K~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-  245 (699)
T 1z45_A          167 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI-  245 (699)
T ss_dssp             HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE-
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCee-
Confidence            9999999876      4789999999999997421          01222222221   123555665      45666 


Q ss_pred             eCceeHHHHHHHHHHHhcCC------CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         211 KQPVYVGDVAAAIVAACKDP------DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~------~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++|||++|+|++++.+++..      ...+++||+++++.+|+.|+++.+++.+|.+.++
T Consensus       246 ~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~  305 (699)
T 1z45_A          246 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY  305 (699)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred             EeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCc
Confidence            89999999999999988631      2235799999999999999999999999988653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=3.9e-35  Score=258.88  Aligned_cols=235  Identities=14%  Similarity=0.088  Sum_probs=185.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc--ccCE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK--YSNV   90 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~   90 (303)
                      +|++|+||||||||+||++|+++|+++|++|++++|+.....+.....  ....+++++.+|+.|.+++.++++  ++|+
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence            355689999999999999999999999999999999763322211100  012569999999999999999999  9999


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCC
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE  169 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~  169 (303)
                      |||+++..           |+.++.+++++|++.+ +++||+ |+.+.. ..+..+..+.++|+.+|+.+|+++++.+++
T Consensus        87 Vi~~a~~~-----------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~-~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~  153 (346)
T 3i6i_A           87 VVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLP-SEFGHD-VNRADPVEPGLNMYREKRRVRQLVEESGIP  153 (346)
T ss_dssp             EEECCCGG-----------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSC-TTTCCCCTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEECCchh-----------hHHHHHHHHHHHHHcCCceEEee-cccCCC-CCccCcCCCcchHHHHHHHHHHHHHHcCCC
Confidence            99999863           7888999999999999 999986 433321 234445567789999999999999999999


Q ss_pred             EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC-CcccCHH
Q psy4233         170 ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG-PKRYLLS  248 (303)
Q Consensus       170 ~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~-~~~~s~~  248 (303)
                      ++++||+.++|........... .....+.+.+++++... ++|++++|+|++++.++.++...+++|++++ ++.+|+.
T Consensus       154 ~tivrpg~~~g~~~~~~~~~~~-~~~~~~~~~~~g~g~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~  231 (346)
T 3i6i_A          154 FTYICCNSIASWPYYNNIHPSE-VLPPTDFFQIYGDGNVK-AYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNIN  231 (346)
T ss_dssp             BEEEECCEESSCCCSCC------CCCCSSCEEEETTSCCC-EEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHH
T ss_pred             EEEEEecccccccCcccccccc-ccCCCceEEEccCCCce-EEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHH
Confidence            9999999999975332111110 11145567888888877 8999999999999999998766688999986 4889999


Q ss_pred             HHHHHHHHHhcCCCCC
Q psy4233         249 ELLDWFHVVMKKGEPD  264 (303)
Q Consensus       249 e~~~~i~~~~g~~~~~  264 (303)
                      |+++.+++.+|++..+
T Consensus       232 e~~~~~~~~~g~~~~~  247 (346)
T 3i6i_A          232 ELASVWEKKIGRTLPR  247 (346)
T ss_dssp             HHHHHHHHHHTSCCCE
T ss_pred             HHHHHHHHHHCCCCce
Confidence            9999999999998763

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=2.8e-35  Score=246.10  Aligned_cols=218  Identities=17%  Similarity=0.203  Sum_probs=178.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCce-EEEecCCCCHHHHHHHhcccCEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV-LFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ..+++|+|+||||||+||++++++|+++|++|++++|+.... +.+..    .++ +++.+|++  +++.+.+.++|+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~-~~~~~----~~~~~~~~~Dl~--~~~~~~~~~~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG-PELRE----RGASDIVVANLE--EDFSHAFASIDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHH----TTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH-HHHHh----CCCceEEEcccH--HHHHHHHcCCCEEE
Confidence            346789999999999999999999999999999999975432 22221    358 99999998  77888889999999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATI  172 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~i  172 (303)
                      |+||......+...+++|+.++.++++++++.++++||++||.+.+.... .+ .+...|+.+|..+|++++..++++++
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~-~~-~~~~~Y~~sK~~~e~~~~~~gi~~~~  167 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQ-GP-MNMRHYLVAKRLADDELKRSSLDYTI  167 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGG-SC-GGGHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCC-Ch-hhhhhHHHHHHHHHHHHHHCCCCEEE
Confidence            99998777778889999999999999999999999999999977665321 11 45678999999999999999999999


Q ss_pred             EeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHH
Q psy4233         173 FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD  252 (303)
Q Consensus       173 lrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~  252 (303)
                      +||++++|+...             ..+.....+... .++++++|+|++++.+++++...|++|+++++ .+++.|+++
T Consensus       168 lrpg~v~~~~~~-------------~~~~~~~~~~~~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~  232 (236)
T 3e8x_A          168 VRPGPLSNEEST-------------GKVTVSPHFSEI-TRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVVE  232 (236)
T ss_dssp             EEECSEECSCCC-------------SEEEEESSCSCC-CCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHH
T ss_pred             EeCCcccCCCCC-------------CeEEeccCCCcc-cCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHHH
Confidence            999999998542             122333344444 78999999999999999987677899999888 599999998


Q ss_pred             HHH
Q psy4233         253 WFH  255 (303)
Q Consensus       253 ~i~  255 (303)
                      .++
T Consensus       233 ~i~  235 (236)
T 3e8x_A          233 QLG  235 (236)
T ss_dssp             TC-
T ss_pred             Hhc
Confidence            765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=4.7e-34  Score=255.10  Aligned_cols=241  Identities=14%  Similarity=0.021  Sum_probs=191.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhc-CC----CC-ceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLC-GD----LG-QVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~-~~----~~-~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      ++|||||||||||++++++|+++|++|++++|+..... ..+... ..    .+ +++++.+|+.|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            69999999999999999999999999999999764311 111110 00    12 689999999999999999986  69


Q ss_pred             EEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-----eEEEEecCccCCC-----CCCCCCCCCCchhHH
Q psy4233          90 VVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVE-----KFIHISALNADPN-----PPTYYISGGSQFYRT  155 (303)
Q Consensus        90 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~Ss~~~~~~-----~~~~~~~~~~~y~~~  155 (303)
                      +|||+|+....    ..+...+++|+.++.+++++|.+.+++     +|||+||.++|+.     .|+.|..+.+.|+.+
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~s  188 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS  188 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHH
Confidence            99999997532    356678899999999999999988776     9999999999975     344566778899999


Q ss_pred             HHHHHHHHHhh----CCCEEEEeecceeeCCCch--h-hHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--L-RYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       156 K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~-~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |..+|.+++.+    +++++++|++.+|||+...  . ..+..++..  .+. ....++++... ++|++++|+|++++.
T Consensus       189 K~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~-~~~v~v~Dva~a~~~  267 (381)
T 1n7h_A          189 KCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS-RDWGFAGDYVEAMWL  267 (381)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE-EECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCce-eeeEEHHHHHHHHHH
Confidence            99999998764    7899999999999997532  1 222222222  222 23346777776 899999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      +++++.  +++||+++++.+|+.|+++.+++.+|.+.
T Consensus       268 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          268 MLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             HHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             HHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence            998654  46999999999999999999999999863

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=5.1e-34  Score=253.15  Aligned_cols=235  Identities=11%  Similarity=0.042  Sum_probs=183.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D   89 (303)
                      +|+|||||||||||++++++|+++|     ++|++++|+.....  .    ...+++++.+|+.|.+++.+++++   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--H----EDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--C----CSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--c----ccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            4799999999999999999999999     99999999865432  1    124689999999999999999998   99


Q ss_pred             EEEEccccCccccchhhhhhhcchHHHHHHHHHhc--CCceEE-------EEecCccCCCC--------CCCCCCC-CCc
Q psy4233          90 VVINLIGREFATKNFTIADANVEIPARLARLSKEM--GVEKFI-------HISALNADPNP--------PTYYISG-GSQ  151 (303)
Q Consensus        90 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v-------~~Ss~~~~~~~--------~~~~~~~-~~~  151 (303)
                      +|||+|+... ..+...+++|+.++.+++++|++.  +++++|       |+||.++|+..        |+.|..+ .+.
T Consensus        75 ~vih~a~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~  153 (364)
T 2v6g_A           75 HVFYVTWANR-STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNF  153 (364)
T ss_dssp             EEEECCCCCC-SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCH
T ss_pred             EEEECCCCCc-chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchh
Confidence            9999999753 456778999999999999999998  789998       79999998763        2323333 456


Q ss_pred             hhHHHHHHHHHHHh----hC-CCEEEEeecceeeCCCch-hh-HH----HHHH-HhhhcceeeecCCCc--eeeCceeHH
Q psy4233         152 FYRTKYQGEKEVLR----EF-PEATIFRPSDMYGSGDKF-LR-YY----GHMW-RHVFRKLAVYKKGEE--TIKQPVYVG  217 (303)
Q Consensus       152 y~~~K~~~e~~~~~----~~-~~~~ilrp~~~~G~~~~~-~~-~~----~~~~-~~~~~~~~~~~~~~~--~~~~~i~~~  217 (303)
                      |..    +|+++++    .+ ++++++||+++|||+... .. .+    ...+ ...+..+.+++++.+  .+.++++++
T Consensus       154 y~~----~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~  229 (364)
T 2v6g_A          154 YYD----LEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDAD  229 (364)
T ss_dssp             HHH----HHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHH
T ss_pred             hHH----HHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHH
Confidence            743    5555554    45 999999999999997542 11 11    1111 113444555666521  226889999


Q ss_pred             HHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         218 DVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       218 Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      |+|++++.+++++...|++||+++++.+|+.|+++.+++.+|.+..
T Consensus       230 Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          230 LIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             HHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred             HHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence            9999999999876556889999999999999999999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=4e-34  Score=249.18  Aligned_cols=229  Identities=17%  Similarity=0.126  Sum_probs=185.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      +|||||||||||++++++|+++  |++|++++|+....          .+++++.+|+.|++++.++++  ++|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------cCceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            5899999999999999999998  79999999875432          147789999999999999998  799999999


Q ss_pred             ccCc---cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          96 GREF---ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        96 ~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      +...   ...+...+++|+.++.++++++++.+++++|++||.++|+..       ++.|..|.++|+.+|..+|.+++.
T Consensus        71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A           71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHH
Confidence            8643   245667889999999999999999999999999999998753       334556788999999999998865


Q ss_pred             h----CCCEEEEeecceeeCCCc----hhhHHH-HHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC---
Q psy4233         166 E----FPEATIFRPSDMYGSGDK----FLRYYG-HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA---  232 (303)
Q Consensus       166 ~----~~~~~ilrp~~~~G~~~~----~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---  232 (303)
                      +    +++++++||+.+||+...    ....+. .+... ..+..+.++++... ++|+|++|+|++++.+++++..   
T Consensus       151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~~~l~~~~~~~~  229 (317)
T 3ajr_A          151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRA-LPMMYMPDALKALVDLYEADRDKLV  229 (317)
T ss_dssp             HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCC-EEEEEHHHHHHHHHHHHHCCGGGCS
T ss_pred             HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccce-eeeeEHHHHHHHHHHHHhCCccccc
Confidence            3    899999999999996421    111111 12221 34455666666666 8999999999999999986543   


Q ss_pred             CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         233 AGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       230 ~g~~~~i~~-~~~s~~e~~~~i~~~~~~  256 (317)
T 3ajr_A          230 LRNGYNVTA-YTFTPSELYSKIKERIPE  256 (317)
T ss_dssp             SCSCEECCS-EEECHHHHHHHHHTTCCS
T ss_pred             cCceEecCC-ccccHHHHHHHHHHHCCc
Confidence            357999986 679999999999999983

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=5.3e-34  Score=245.35  Aligned_cols=220  Identities=16%  Similarity=0.106  Sum_probs=177.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |+||||||||+||++++++|++. |++|++++|++..... +.    ..+++++.+|+.|++++.++++++|+|||+++.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-~~----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-DW----RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-GG----BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-hh----hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            58999999999999999999998 8999999998654322 11    246999999999999999999999999999986


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecc
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD  177 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~  177 (303)
                      ....      ..|+.++.+++++|++.++++||++||.+...   ..    ...+...+..+|+.++..+++++++||++
T Consensus        76 ~~~~------~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~---~~----~~~~~~~~~~~e~~~~~~g~~~~ilrp~~  142 (289)
T 3e48_A           76 IHPS------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQH---NN----PFHMSPYFGYASRLLSTSGIDYTYVRMAM  142 (289)
T ss_dssp             CCSH------HHHHHHHHHHHHHHHHTTCCEEEEEEESCCST---TC----CSTTHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred             Cccc------hhhHHHHHHHHHHHHHcCCCEEEEEcccCCCC---CC----CCccchhHHHHHHHHHHcCCCEEEEeccc
Confidence            4321      34788899999999999999999999965432   11    12344556688899999999999999999


Q ss_pred             eeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHH
Q psy4233         178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV  257 (303)
Q Consensus       178 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~  257 (303)
                      +||+..   ..+..+.   ......++.+... ++|++++|+|++++.++.++...|++||++ ++.+|+.|+++.+++.
T Consensus       143 ~~~~~~---~~~~~~~---~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~  214 (289)
T 3e48_A          143 YMDPLK---PYLPELM---NMHKLIYPAGDGR-INYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEA  214 (289)
T ss_dssp             ESTTHH---HHHHHHH---HHTEECCCCTTCE-EEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHH
T ss_pred             cccccH---HHHHHHH---HCCCEecCCCCce-eeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHH
Confidence            998732   2333332   2233445566666 899999999999999999876668899999 9999999999999999


Q ss_pred             hcCCCCC
Q psy4233         258 MKKGEPD  264 (303)
Q Consensus       258 ~g~~~~~  264 (303)
                      +|++..+
T Consensus       215 ~g~~~~~  221 (289)
T 3e48_A          215 SGTEIKY  221 (289)
T ss_dssp             HTSCCEE
T ss_pred             HCCceeE
Confidence            9998653

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=1.3e-34  Score=239.32  Aligned_cols=205  Identities=17%  Similarity=0.179  Sum_probs=171.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |+|+||||||+||++++++|+++|++|++++|+.......       ++++++.+|++| ++++.++++++|+|||+|+.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            5899999999999999999999999999999986432221       569999999999 99999999999999999997


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC--CCCCCCCchhHHHHHHHHHH-HhhCCCEEEEe
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT--YYISGGSQFYRTKYQGEKEV-LREFPEATIFR  174 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~--~~~~~~~~y~~~K~~~e~~~-~~~~~~~~ilr  174 (303)
                      ...    ..+++|+.++.++++++++.++++||++||.+++.....  .+..+.+.|+.+|..+|+++ +..+++++++|
T Consensus        74 ~~~----~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr  149 (219)
T 3dqp_A           74 GGK----SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ  149 (219)
T ss_dssp             TTS----SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred             CCC----CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence            542    378899999999999999999999999999888763211  12234678999999999999 66799999999


Q ss_pred             ecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHH
Q psy4233         175 PSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD  252 (303)
Q Consensus       175 p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~  252 (303)
                      |+++||+....             .+. .  +... +++++++|+|++++.++.++...|++||+++++ .++.|+.+
T Consensus       150 p~~v~g~~~~~-------------~~~-~--~~~~-~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~  209 (219)
T 3dqp_A          150 PGALTEEEATG-------------LID-I--NDEV-SASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALE  209 (219)
T ss_dssp             ECSEECSCCCS-------------EEE-E--SSSC-CCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHH
T ss_pred             CceEecCCCCC-------------ccc-c--CCCc-CCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHH
Confidence            99999985421             111 1  2344 789999999999999999877678899998875 88888765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.5e-34  Score=250.49  Aligned_cols=243  Identities=12%  Similarity=0.060  Sum_probs=191.8

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      ...+++|+|||||||||||++++++|+++|       ++|++++|+......     ....+++++.+|+.|++++.+++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHH
Confidence            344678899999999999999999999999       899999997543221     11246899999999999999998


Q ss_pred             c-ccCEEEEccccCc---cccchhhhhhhcchHHHHHHHHHhcC-----CceEEEEecCccCCCC------CCCCCCCCC
Q psy4233          86 K-YSNVVINLIGREF---ATKNFTIADANVEIPARLARLSKEMG-----VEKFIHISALNADPNP------PTYYISGGS  150 (303)
Q Consensus        86 ~-~~D~vi~~a~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~Ss~~~~~~~------~~~~~~~~~  150 (303)
                      + ++|+|||+|+...   ...+...+++|+.++.++++++++.+     +++||++||..+|+..      |+.|..+.+
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~  163 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLT  163 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSS
T ss_pred             hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcc
Confidence            5 7999999999753   24566788999999999999998876     7899999999998753      445556778


Q ss_pred             chhHHHHHHHHHHHhh----CCCEEEEeecceee-CCCc---hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE----FPEATIFRPSDMYG-SGDK---FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G-~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      +|+.+|..+|++++++    +++++++|++.+|| |+..   ....+..++..  .+....+++.+... .++++++|+|
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~Dva  242 (342)
T 2hrz_A          164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR-HWHASPRSAV  242 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE-EEEECHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc-eeeEehHHHH
Confidence            9999999999998875    57899999999998 7542   12233333332  33334444444444 6789999999


Q ss_pred             HHHHHHhcCCCC---CCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233         221 AAIVAACKDPDA---AGKIYQAVGPKRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       221 ~~~~~~~~~~~~---~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  262 (303)
                      ++++.+++.+..   .+++||++ ++.+|+.|+++.+++.+|.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          243 GFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCccc
Confidence            999999986532   46799995 577999999999999999764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.1e-34  Score=255.15  Aligned_cols=244  Identities=11%  Similarity=-0.016  Sum_probs=186.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEE-ecCCCCHHHHHHHhcccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQ-PYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~-~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      .+++|+|||||||||||++++++|+++|++|++++|+...........  ....+++++ .+|++|.+++.++++++|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            356789999999999999999999999999999999743321111100  001468888 89999999999999999999


Q ss_pred             EEccccCc-cccchhhhhhhcchHHHHHHHHHh-cCCceEEEEecCccCCCCC----------CC---------------
Q psy4233          92 INLIGREF-ATKNFTIADANVEIPARLARLSKE-MGVEKFIHISALNADPNPP----------TY---------------  144 (303)
Q Consensus        92 i~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~Ss~~~~~~~~----------~~---------------  144 (303)
                      ||+|+... ...+...+++|+.++.+++++|.+ .+++++||+||.++++...          +.               
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  167 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence            99999743 245667899999999999999984 6788999999999885321          11               


Q ss_pred             -CCCCCCchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh---HHHHHHHh--hhcceeeecCCCceeeC
Q psy4233         145 -YISGGSQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR---YYGHMWRH--VFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       145 -~~~~~~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~  212 (303)
                       +..+.+.|+.+|..+|.+++.+      +++++++||+++|||......   .+..++..  .+....+++.+ +. ++
T Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~  245 (342)
T 1y1p_A          168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP-QY  245 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS-EE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc-CC
Confidence             1234468999999999998764      578999999999999754221   33333332  34444445554 44 68


Q ss_pred             ceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         213 PVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      |+|++|+|++++.+++++...|+.+ +++++.+|+.|+++.+++.+|.+
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            9999999999999998755556545 55678899999999999999975

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=2.8e-34  Score=255.57  Aligned_cols=210  Identities=16%  Similarity=0.190  Sum_probs=179.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |||||||||||||++|+++|+++|+ +|++++|+                        .|++++.++++++|+|||+|+.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------~d~~~l~~~~~~~d~Vih~a~~   56 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------TKEEELESALLKADFIVHLAGV   56 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------CCHHHHHHHHHHCSEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------CCHHHHHHHhccCCEEEECCcC
Confidence            6899999999999999999999998 88887774                        4788999999999999999998


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh----hCCCEEE
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR----EFPEATI  172 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~----~~~~~~i  172 (303)
                      .....+...+++|+.++.+++++|++.+++ ++||+||..+++         .++|+.+|..+|+++++    .++++++
T Consensus        57 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i  127 (369)
T 3st7_A           57 NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------DNPYGESKLQGEQLLREYAEEYGNTVYI  127 (369)
T ss_dssp             BCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------CSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------CCCchHHHHHHHHHHHHHHHHhCCCEEE
Confidence            777777889999999999999999999987 999999999987         47999999999999987    5899999


Q ss_pred             EeecceeeCCCch--hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC-CcEEEEeCCcccCH
Q psy4233         173 FRPSDMYGSGDKF--LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPKRYLL  247 (303)
Q Consensus       173 lrp~~~~G~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~s~  247 (303)
                      +||+++|||+...  ...+..++..  .+..+.+ +++... ++++|++|+|++++.+++++... +++||+++++.+|+
T Consensus       128 ~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~  205 (369)
T 3st7_A          128 YRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVE-LTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTL  205 (369)
T ss_dssp             EEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCE-EEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEH
T ss_pred             EECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeE-EEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeH
Confidence            9999999986532  1233333332  3334443 455666 89999999999999999976553 78999999999999


Q ss_pred             HHHHHHHHHHhcCCCC
Q psy4233         248 SELLDWFHVVMKKGEP  263 (303)
Q Consensus       248 ~e~~~~i~~~~g~~~~  263 (303)
                      .|+++.+++.+|.+..
T Consensus       206 ~e~~~~~~~~~g~~~~  221 (369)
T 3st7_A          206 GEIVDLLYKFKQSRLD  221 (369)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcc
Confidence            9999999999998744

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=5e-34  Score=251.39  Aligned_cols=233  Identities=12%  Similarity=0.136  Sum_probs=187.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhC-CC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQ-GS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ..+++|+||||||||+||++++++|+++ |+ +|++++|+..+......... ..+++++.+|++|.+++.++++++|+|
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-DPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            3466889999999999999999999999 97 99999997443211111111 246999999999999999999999999


Q ss_pred             EEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-
Q psy4233          92 INLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-  166 (303)
Q Consensus        92 i~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-  166 (303)
                      ||+|+...    ...+...+++|+.++.+++++|.+.+++++|++||..++.        |.++|+.+|+.+|.+++.. 
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------p~~~Y~~sK~~~E~~~~~~~  167 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------PINLYGATKLCSDKLFVSAN  167 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------CCSHHHHHHHHHHHHHHHGG
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------CccHHHHHHHHHHHHHHHHH
Confidence            99999643    2355678999999999999999999999999999987653        4689999999999999874 


Q ss_pred             ------CCCEEEEeecceeeCCCchhhHHHHHHHhhhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         167 ------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       167 ------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                            +++++++|||++|||+......+...+. .++ .+++. ++... ++|++++|+|++++.+++++ ..|++|++
T Consensus       168 ~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~-~g~~~~~i~-~~~~~-r~~i~v~D~a~~v~~~l~~~-~~g~~~~~  243 (344)
T 2gn4_A          168 NFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQ-NKASEIPIT-DIRMT-RFWITLDEGVSFVLKSLKRM-HGGEIFVP  243 (344)
T ss_dssp             GCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHH-HTCCCEEES-CTTCE-EEEECHHHHHHHHHHHHHHC-CSSCEEEE
T ss_pred             HHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHH-cCCCceEEe-CCCeE-EeeEEHHHHHHHHHHHHhhc-cCCCEEec
Confidence                  5899999999999998765444444333 333 45554 45555 78999999999999999865 35789998


Q ss_pred             eCCcccCHHHHHHHHHHHhcC
Q psy4233         240 VGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       240 ~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      .++ .+|+.|+++.+.+.++.
T Consensus       244 ~~~-~~s~~el~~~i~~~~~~  263 (344)
T 2gn4_A          244 KIP-SMKMTDLAKALAPNTPT  263 (344)
T ss_dssp             CCC-EEEHHHHHHHHCTTCCE
T ss_pred             CCC-cEEHHHHHHHHHHhCCe
Confidence            766 59999999999876543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.1e-33  Score=269.37  Aligned_cols=241  Identities=15%  Similarity=0.139  Sum_probs=192.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH-HHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE-IRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~D~vi~   93 (303)
                      +++|+|||||||||||++++++|+++ |++|++++|+.......    ....+++++.+|++|.++ +.++++++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----TTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----ccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            35789999999999999999999998 89999999975432211    112569999999999765 7778889999999


Q ss_pred             ccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCC-------------CCCCchhHHH
Q psy4233          94 LIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYI-------------SGGSQFYRTK  156 (303)
Q Consensus        94 ~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------------~~~~~y~~~K  156 (303)
                      +|+....    ..+...+++|+.++.+++++|++.+ ++|||+||.++|+.....+.             .+.+.|+.+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            9986432    3556788999999999999999988 89999999999865322111             2345799999


Q ss_pred             HHHHHHHHh----hCCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         157 YQGEKEVLR----EFPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       157 ~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..+|++++.    .+++++++||+++|||+...        ...+..++..  .+..+.+++++.+. ++|+|++|+|++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~-~~~i~v~Dva~a  546 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK-RCFTDIRDGIEA  546 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCE-EECEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeE-EEEEEHHHHHHH
Confidence            999999865    48999999999999997532        1223333322  45566677777777 899999999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCc-ccCHHHHHHHHHHHhcCCC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPK-RYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  262 (303)
                      ++.+++++.  ..|++||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       547 i~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          547 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            999998654  357899999987 8999999999999999764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=9.3e-34  Score=243.29  Aligned_cols=216  Identities=18%  Similarity=0.150  Sum_probs=174.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +|||||||||||++++++|+++  |++|++++|++... ..+..    .+++++.+|++|++++.++++++|+|||+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-QALAA----QGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-HHHHH----TTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-hhhhc----CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999998  99999999975432 21111    35899999999999999999999999999985


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecc
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD  177 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~  177 (303)
                      ..        +.|+.++.+++++|++.++++||++||.+++.       . ..+|+.+|..+|+++++.+++++++||+.
T Consensus        76 ~~--------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------~-~~~y~~sK~~~e~~~~~~~~~~~ilrp~~  139 (286)
T 2zcu_A           76 EV--------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------S-PLGLADEHIETEKMLADSGIVYTLLRNGW  139 (286)
T ss_dssp             --------------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------C-CSTTHHHHHHHHHHHHHHCSEEEEEEECC
T ss_pred             Cc--------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------C-cchhHHHHHHHHHHHHHcCCCeEEEeChH
Confidence            31        24788999999999999999999999999873       1 25899999999999999999999999988


Q ss_pred             eeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHH
Q psy4233         178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV  257 (303)
Q Consensus       178 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~  257 (303)
                      ++++..   ..+....  ..+.+. ++.+... +++++++|+|++++.++.++...|++||+++++.+|+.|+++.+++.
T Consensus       140 ~~~~~~---~~~~~~~--~~~~~~-~~~~~~~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~  212 (286)
T 2zcu_A          140 YSENYL---ASAPAAL--EHGVFI-GAAGDGK-IASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQ  212 (286)
T ss_dssp             BHHHHH---TTHHHHH--HHTEEE-ESCTTCC-BCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHH
T ss_pred             HhhhhH---HHhHHhh--cCCcee-ccCCCCc-cccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHH
Confidence            766422   2222222  223333 5555665 89999999999999999876556889999999999999999999999


Q ss_pred             hcCCCC
Q psy4233         258 MKKGEP  263 (303)
Q Consensus       258 ~g~~~~  263 (303)
                      +|++..
T Consensus       213 ~g~~~~  218 (286)
T 2zcu_A          213 SGKQVT  218 (286)
T ss_dssp             HSSCCE
T ss_pred             HCCCCc
Confidence            998865

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=3.2e-34  Score=241.62  Aligned_cols=230  Identities=15%  Similarity=0.062  Sum_probs=179.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +++|+|+||||||+||++++++|+++  |++|++++|++... +.+     ..+++++.+|++|.+++.++++++|+|||
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   75 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKI-----GGEADVFIGDITDADSINPAFQGIDALVI   75 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-HHT-----TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-hhc-----CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence            56789999999999999999999999  89999999974322 111     24688999999999999999999999999


Q ss_pred             ccccCccc----------cc-------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          94 LIGREFAT----------KN-------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        94 ~a~~~~~~----------~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|+.....          .+       ...+++|+.++.++++++++.++++||++||.+++....+........|+.+|
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK  155 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK  155 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHH
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHH
Confidence            99864211          11       13568999999999999999999999999999886432211111124577899


Q ss_pred             HHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE
Q psy4233         157 YQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI  236 (303)
Q Consensus       157 ~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~  236 (303)
                      ..+|.+++..+++++++||+.+||+.......+      .....++++   .. .++++++|+|++++.+++++...+++
T Consensus       156 ~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~------~~~~~~~~~---~~-~~~~~~~Dva~~~~~~~~~~~~~g~~  225 (253)
T 1xq6_A          156 RKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL------VGKDDELLQ---TD-TKTVPRADVAEVCIQALLFEEAKNKA  225 (253)
T ss_dssp             HHHHHHHHTSSSCEEEEEECEEECSCSSSSCEE------EESTTGGGG---SS-CCEEEHHHHHHHHHHHTTCGGGTTEE
T ss_pred             HHHHHHHHhCCCceEEEecceeecCCcchhhhh------ccCCcCCcC---CC-CcEEcHHHHHHHHHHHHcCccccCCE
Confidence            999999999999999999999999865421111      011111221   12 46899999999999999876556889


Q ss_pred             EEEeCCc---ccCHHHHHHHHHHHhcCC
Q psy4233         237 YQAVGPK---RYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       237 ~~i~~~~---~~s~~e~~~~i~~~~g~~  261 (303)
                      ||+++++   .+|+.|+++.+++.+|++
T Consensus       226 ~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          226 FDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             EEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             EEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            9999864   599999999999998864

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.8e-34  Score=267.22  Aligned_cols=226  Identities=15%  Similarity=0.131  Sum_probs=175.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +|+|||||||||||++|+++|+++|++|++++|+....             +.+.+|+.+.  +.+.+.++|+|||+|+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------~~v~~d~~~~--~~~~l~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------GKRFWDPLNP--ASDLLDGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------TCEECCTTSC--CTTTTTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------cceeecccch--hHHhcCCCCEEEECCCC
Confidence            78999999999999999999999999999999986431             1256777643  35667889999999996


Q ss_pred             C-----ccccchhhhhhhcchHHHHHHH-HHhcCCceEEEEecCccCC-C------CCCCCCCCCCchhHHHHHHHHHHH
Q psy4233          98 E-----FATKNFTIADANVEIPARLARL-SKEMGVEKFIHISALNADP-N------PPTYYISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus        98 ~-----~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~Ss~~~~~-~------~~~~~~~~~~~y~~~K~~~e~~~~  164 (303)
                      .     ....+..++++|+.++.+|+++ +++.++++|||+||.++|+ .      .++.+. +.+.|+.+|...|.++.
T Consensus       212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHH
Confidence            4     2344567889999999999999 6777899999999999998 2      344443 67889999998887654


Q ss_pred             ---hhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         165 ---REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       165 ---~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                         ..+++++++||+++|||+.+....+...+  ..+....++++.+. ++|||++|+|++++.+++++.. +++||+++
T Consensus       291 ~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~--~~g~~~~~g~g~~~-~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~  366 (516)
T 3oh8_A          291 PASDAGKRVAFIRTGVALSGRGGMLPLLKTLF--STGLGGKFGDGTSW-FSWIAIDDLTDIYYRAIVDAQI-SGPINAVA  366 (516)
T ss_dssp             HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTT--C---CCCCTTSCCE-ECEEEHHHHHHHHHHHHHCTTC-CEEEEESC
T ss_pred             HHHhCCCCEEEEEeeEEECCCCChHHHHHHHH--HhCCCcccCCCCce-EceEeHHHHHHHHHHHHhCccc-CCcEEEEC
Confidence               35899999999999999865444433332  22233456777777 8999999999999999987655 44999999


Q ss_pred             CcccCHHHHHHHHHHHhcCCCC
Q psy4233         242 PKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       242 ~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++.+|+.|+++.+++.+|.+..
T Consensus       367 ~~~~s~~el~~~i~~~~g~~~~  388 (516)
T 3oh8_A          367 PNPVSNADMTKILATSMHRPAF  388 (516)
T ss_dssp             SCCEEHHHHHHHTTC-------
T ss_pred             CCCCCHHHHHHHHHHHhCCCCC
Confidence            9999999999999999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=7.9e-34  Score=257.36  Aligned_cols=238  Identities=17%  Similarity=0.179  Sum_probs=181.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--c----chhc-------CCCCceEEEecCCCCHHHH
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--D----LRLC-------GDLGQVLFQPYHPRNDDEI   81 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~----~~~~-------~~~~~~~~~~~Dl~d~~~~   81 (303)
                      +..+|+|||||||||||++++++|++.|++|++++|+......  .    +...       ....+++++.+|+.|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            3457899999999999999999999999999999998652111  0    0000       0125799999999998887


Q ss_pred             HHHhcccCEEEEccccC-ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-----------CCCCC---C
Q psy4233          82 RKAIKYSNVVINLIGRE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-----------PPTYY---I  146 (303)
Q Consensus        82 ~~~~~~~D~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-----------~~~~~---~  146 (303)
                      . .+.++|+|||+|+.. ....+...+++|+.++.+++++|++ ++++|||+||.++ +.           .|+.+   .
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~  222 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  222 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCC
Confidence            7 777899999999974 3356677899999999999999999 7789999999998 32           12222   3


Q ss_pred             CCCCchhHHHHHHHHHHHh---hCCCEEEEeecceeeCCCchh-------hHHHHHHHh--hhcceeeecCCCceeeCce
Q psy4233         147 SGGSQFYRTKYQGEKEVLR---EFPEATIFRPSDMYGSGDKFL-------RYYGHMWRH--VFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~---~~~~~~ilrp~~~~G~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~i  214 (303)
                      .+.+.|+.+|+.+|.++++   .+++++++||+++|||.....       ..+..+++.  ..+.++. +.+... ++|+
T Consensus       223 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~v  300 (427)
T 4f6c_A          223 LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMP-VDFS  300 (427)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCE-ECCE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccce-EEEe
Confidence            4778999999999999988   589999999999999865421       223344443  2333333 233455 8999


Q ss_pred             eHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         215 YVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      +++|+|++++.++.++. .+++||+++++++++.|+++.+.+ +|
T Consensus       301 ~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          301 FVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             EHHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             eHHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99999999999998766 788999999999999999999998 56

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=9.4e-33  Score=242.64  Aligned_cols=240  Identities=13%  Similarity=0.098  Sum_probs=171.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc--ccchhcCC-CCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV--RDLRLCGD-LGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +.++++|||||||||||++++++|+++|++|++++|+.....  ..+..... ..+++++.+|++|.+++.++++++|+|
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            346789999999999999999999999999999999754211  11100000 125899999999999999999999999


Q ss_pred             EEccccCcc--ccc-hhhhhhhcchHHHHHHHHHhcC-CceEEEEecCcc-CCCC-------CCCCC---------CCCC
Q psy4233          92 INLIGREFA--TKN-FTIADANVEIPARLARLSKEMG-VEKFIHISALNA-DPNP-------PTYYI---------SGGS  150 (303)
Q Consensus        92 i~~a~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~-~~~~-------~~~~~---------~~~~  150 (303)
                      ||+|+....  ..+ ...+++|+.++.+++++|++.+ +++|||+||.++ ++..       |+.+.         .+.+
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW  161 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence            999986422  222 2578999999999999999887 899999999874 4321       11110         1334


Q ss_pred             chhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCch--hhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKF--LRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +|+.+|..+|.++..    .+++++++||+++|||+...  ...+..... ..+... .++.+..  ..|+|++|+|+++
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~--~~~i~v~Dva~a~  238 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSIIRQ--GQFVHLDDLCNAH  238 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHHTE--EEEEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-cccccCC--CCEEEHHHHHHHH
Confidence            699999999998754    48999999999999997532  111111100 011111 2222222  3499999999999


Q ss_pred             HHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       224 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      +.+++++.. +..|++ +++.+|+.|+++.+.+.++
T Consensus       239 ~~~~~~~~~-~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          239 IYLFENPKA-EGRYIC-SSHDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHHHHCTTC-CEEEEE-CCEEEEHHHHHHHHHHHCT
T ss_pred             HHHhcCccc-CceEEE-eCCCCCHHHHHHHHHHHCC
Confidence            999986544 347765 4556899999999999874

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=1e-32  Score=234.73  Aligned_cols=216  Identities=11%  Similarity=0.001  Sum_probs=182.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |+||+|+||||||+||++++++|+++|++|++++|+.....        ..+++++.+|++|.+++.++++++|+|||+|
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            34679999999999999999999999999999999864332        2469999999999999999999999999999


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-------CCCCCCCCCCchhHHHHHHHHHHHh---
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-------PPTYYISGGSQFYRTKYQGEKEVLR---  165 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------~~~~~~~~~~~y~~~K~~~e~~~~~---  165 (303)
                      |.......+..+++|+.++.++++++++.++++||++||..+++.       .++.|..+.+.|+.+|..+|.+++.   
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            987777778899999999999999999999999999999999863       2445667788999999999998864   


Q ss_pred             -hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcc
Q psy4233         166 -EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR  244 (303)
Q Consensus       166 -~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~  244 (303)
                       ++++++++||+.+||+...                     +... .+|++++|+++++..+++.+...+.++++.++++
T Consensus       153 ~~g~~~~~vr~~~v~~~~~~---------------------~~~~-~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEPNN---------------------YRML-STWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSCCS---------------------TTHH-HHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCCCC---------------------CCce-eeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence             4899999999999986221                     1222 5789999999999999987766566899999888


Q ss_pred             cCHHHHHHHHHHHhcCCCC
Q psy4233         245 YLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       245 ~s~~e~~~~i~~~~g~~~~  263 (303)
                      .++.++...  +.+|.++.
T Consensus       211 ~~~~~~~~~--~~~g~~p~  227 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWKPK  227 (267)
T ss_dssp             TCCBCCGGG--GGGCCCCC
T ss_pred             CCcccChhH--HHCCCCCC
Confidence            888877444  56676544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-33  Score=241.58  Aligned_cols=235  Identities=16%  Similarity=0.169  Sum_probs=177.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc----cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD----VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +|+|+||||||+||++++++|+++|++|++++|+....    ...+... ...+++++.+|+.|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            67999999999999999999999999999999985431    1111111 124699999999999999999999999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhCCCEE
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREFPEAT  171 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~~~~~  171 (303)
                      +++.....       .|+.++.+++++|++++ +++||+ |+.+........+..| ...| .+|..+|+++++.+++++
T Consensus        83 ~a~~~~~~-------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~  153 (313)
T 1qyd_A           83 ALAGGVLS-------HHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYT  153 (313)
T ss_dssp             CCCCSSSS-------TTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBC
T ss_pred             CCccccch-------hhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeE
Confidence            99875332       36888999999999999 999985 4333221111122233 3457 999999999999999999


Q ss_pred             EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-cccCHHHH
Q psy4233         172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRYLLSEL  250 (303)
Q Consensus       172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~  250 (303)
                      ++||+.++|+................+.+.+++++... +++++++|+|++++.++.++...++.|++.++ +.+|+.|+
T Consensus       154 ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~  232 (313)
T 1qyd_A          154 YVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVK-GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEV  232 (313)
T ss_dssp             EEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSE-EEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHH
T ss_pred             EEEeceeccccccccccccccccCCCCeEEEeCCCCce-EEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHH
Confidence            99999998742211000000000033455667777766 89999999999999999876556778988875 78999999


Q ss_pred             HHHHHHHhcCCCC
Q psy4233         251 LDWFHVVMKKGEP  263 (303)
Q Consensus       251 ~~~i~~~~g~~~~  263 (303)
                      ++.+++.+|++..
T Consensus       233 ~~~~~~~~g~~~~  245 (313)
T 1qyd_A          233 IQIWERLSEQNLD  245 (313)
T ss_dssp             HHHHHHHHTCCCE
T ss_pred             HHHHHHhcCCCCc
Confidence            9999999999866

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=3.7e-33  Score=258.26  Aligned_cols=236  Identities=17%  Similarity=0.171  Sum_probs=181.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--c----chh-------cCCCCceEEEecCCCCHHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--D----LRL-------CGDLGQVLFQPYHPRNDDEIRK   83 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~----~~~-------~~~~~~~~~~~~Dl~d~~~~~~   83 (303)
                      .+|+|||||||||||++|+++|+++|++|++++|+......  .    +..       ....++++++.+|+.|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            46899999999999999999999999999999998652211  0    000       011257999999999987777 


Q ss_pred             HhcccCEEEEccccCc-cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-----------CCCCC---CCC
Q psy4233          84 AIKYSNVVINLIGREF-ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-----------PPTYY---ISG  148 (303)
Q Consensus        84 ~~~~~D~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-----------~~~~~---~~~  148 (303)
                      .+.++|+|||+|+... ...+..+.++|+.++.+++++|++ +.+++||+||.++ +.           .|+.+   ..+
T Consensus       228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence            6778999999999743 345667889999999999999999 6789999999998 32           12222   236


Q ss_pred             CCchhHHHHHHHHHHHh---hCCCEEEEeecceeeCCCchh-------hHHHHHHHh--hhcceeeecCCCceeeCceeH
Q psy4233         149 GSQFYRTKYQGEKEVLR---EFPEATIFRPSDMYGSGDKFL-------RYYGHMWRH--VFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~---~~~~~~ilrp~~~~G~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      .+.|+.+|+.+|++++.   .+++++++||+.+|||.....       ..+..+++.  ..+.++. +.+... ++|+++
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~-~~~v~v  383 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMP-VDFSFV  383 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSE-EECEEH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCce-EEEEcH
Confidence            78999999999999988   489999999999999965421       224444443  2233332 234555 899999


Q ss_pred             HHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         217 GDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      +|+|++++.++.++. .+++||+++++.+++.|+++.+.+..
T Consensus       384 ~DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          384 DTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            999999999998766 68899999999999999999999865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=2.5e-32  Score=238.27  Aligned_cols=236  Identities=17%  Similarity=0.091  Sum_probs=169.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec-CCCc--ccccchhcC-CCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR-GNFY--DVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~--~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +++|||||||||||++++++|+++|++|++++| ++..  ....+.... ...+++++.+|++|++++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999999999999998 5321  111111100 012588999999999999999999999999


Q ss_pred             ccccCcc--cc-chhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccC-CCC-------CCCC--------CCCCC-ch
Q psy4233          94 LIGREFA--TK-NFTIADANVEIPARLARLSKEM-GVEKFIHISALNAD-PNP-------PTYY--------ISGGS-QF  152 (303)
Q Consensus        94 ~a~~~~~--~~-~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~-~~~-------~~~~--------~~~~~-~y  152 (303)
                      +|+....  .. ....+++|+.++.+++++|.+. ++++|||+||.+++ +..       |+.+        ..|.. +|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y  160 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY  160 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence            9975321  22 2348899999999999999998 78999999998753 221       1110        01222 59


Q ss_pred             hHHHHHHHHHHHh----hCCCEEEEeecceeeCCCch--hhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKF--LRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|..+|.++.+    .+++++++||+++|||+...  ...+...... .+.... ++.  .. .+|+|++|+|++++.
T Consensus       161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~-~~~i~v~Dva~a~~~  236 (322)
T 2p4h_X          161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGV--TR-FHMVHVDDVARAHIY  236 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCE--EE-EEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcC--CC-cCEEEHHHHHHHHHH
Confidence            9999999998765    47999999999999997532  1111111111 121121 222  23 489999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      +++++...| .|| ++++.+|+.|+++.+.+.++
T Consensus       237 ~~~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          237 LLENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HhhCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence            998655445 588 67788999999999998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=7.7e-32  Score=229.78  Aligned_cols=219  Identities=18%  Similarity=0.160  Sum_probs=178.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |+|+||||||+||++++++|++ |++|++++|+....          ++   +.+|++|++++.+++++  +|+|||+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            5899999999999999999994 89999999976321          12   78999999999999987  999999999


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCCCCCCCCchhHHHHHHHHHHHhhC
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTYYISGGSQFYRTKYQGEKEVLREF  167 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~~~~~~~~y~~~K~~~e~~~~~~~  167 (303)
                      ....    ..+...+++|+.++.++++++++.++ ++|++||.++|+..     |+.+..+.+.|+.+|..+|++++.  
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--  143 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--  143 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--
Confidence            7532    35667899999999999999999887 99999999998642     344556678999999999999988  


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCH
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~  247 (303)
                      ++++++||+.+||+. .+...+..... .+..+.++++   . +++++++|+|++++.+++++.  +++||+++ +.+|+
T Consensus       144 ~~~~~iR~~~v~G~~-~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s~  214 (273)
T 2ggs_A          144 DDSLIIRTSGIFRNK-GFPIYVYKTLK-EGKTVFAFKG---Y-YSPISARKLASAILELLELRK--TGIIHVAG-ERISR  214 (273)
T ss_dssp             TTCEEEEECCCBSSS-SHHHHHHHHHH-TTCCEEEESC---E-ECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEEH
T ss_pred             CCeEEEecccccccc-HHHHHHHHHHH-cCCCEEeecC---C-CCceEHHHHHHHHHHHHhcCc--CCeEEECC-CcccH
Confidence            899999999999842 22222222221 3444555543   4 799999999999999998653  44999999 99999


Q ss_pred             HHHHHHHHHHhcCCCC
Q psy4233         248 SELLDWFHVVMKKGEP  263 (303)
Q Consensus       248 ~e~~~~i~~~~g~~~~  263 (303)
                      .|+++.+.+.+|.+..
T Consensus       215 ~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          215 FELALKIKEKFNLPGE  230 (273)
T ss_dssp             HHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHHHhCCChh
Confidence            9999999999998865

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=100.00  E-value=1.6e-33  Score=243.55  Aligned_cols=230  Identities=14%  Similarity=0.082  Sum_probs=179.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +|+|+||||||+||++++++|+++| ++|++++|++.+.. ..+.    ..+++++.+|+.|++++.++++++|+|||++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----LQGAEVVQGDQDDQVIMELALNGAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----HTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----HCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence            5799999999999999999999999 99999999865421 1111    1468999999999999999999999999999


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEee
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP  175 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp  175 (303)
                      +.....    ..+.|+.++.++++++++.++++||++|+.++++..+.   .+..+|+.+|..+|+++++.+++++++||
T Consensus        81 ~~~~~~----~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~---~~~~~y~~sK~~~e~~~~~~gi~~~ilrp  153 (299)
T 2wm3_A           81 NYWESC----SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG---RLAAAHFDGKGEVEEYFRDIGVPMTSVRL  153 (299)
T ss_dssp             CHHHHT----CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT---SCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCccc----cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC---cccCchhhHHHHHHHHHHHCCCCEEEEee
Confidence            853211    23457889999999999999999999888877654332   23478999999999999999999999999


Q ss_pred             cceeeCCCchhhHHHHHHHhhhcc-eeeecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeCCcccCHHHHHHH
Q psy4233         176 SDMYGSGDKFLRYYGHMWRHVFRK-LAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKRYLLSELLDW  253 (303)
Q Consensus       176 ~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~  253 (303)
                      +++||+....  ....... .++. ...++.+... ++|++++|+|++++.++.++. ..|++|++++ +.+|+.|+++.
T Consensus       154 ~~~~~~~~~~--~~~~~~~-~g~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~  228 (299)
T 2wm3_A          154 PCYFENLLSH--FLPQKAP-DGKSYLLSLPTGDVP-MDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAAL  228 (299)
T ss_dssp             CEEGGGGGTT--TCCEECT-TSSSEEECCCCTTSC-EEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHH
T ss_pred             cHHhhhchhh--cCCcccC-CCCEEEEEecCCCCc-cceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHH
Confidence            9999874320  0000000 1111 1122334455 789999999999999998642 3578999986 67999999999


Q ss_pred             HHHHhcCCCC
Q psy4233         254 FHVVMKKGEP  263 (303)
Q Consensus       254 i~~~~g~~~~  263 (303)
                      +.+.+|++..
T Consensus       229 ~~~~~g~~~~  238 (299)
T 2wm3_A          229 LTKHTRKVVH  238 (299)
T ss_dssp             HHHHHSSCEE
T ss_pred             HHHHHCCCce
Confidence            9999999865

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=1.3e-32  Score=227.29  Aligned_cols=209  Identities=13%  Similarity=0.125  Sum_probs=148.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ||||||||||+||++++++|+++|++|++++|++.... .+.     ++++++.+|++|.++  +.+.++|+|||++|..
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~-----~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT-QTH-----KDINILQKDIFDLTL--SDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH-HHC-----SSSEEEECCGGGCCH--HHHTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh-hcc-----CCCeEEeccccChhh--hhhcCCCEEEECCcCC
Confidence            68999999999999999999999999999999854322 111     469999999999887  7889999999999974


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHHH--HH--hhC
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEKE--VL--REF  167 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~~--~~--~~~  167 (303)
                      ..     ..+.|+.++.++++++++.+++++|++||.+++...       ++.+..+.+.|+.+|...|.+  ++  ..+
T Consensus        73 ~~-----~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~g  147 (221)
T 3ew7_A           73 PD-----EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAE  147 (221)
T ss_dssp             TT-----TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTT
T ss_pred             cc-----ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccC
Confidence            32     356789999999999999998999999998775332       233445677899999999886  66  568


Q ss_pred             CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCH
Q psy4233         168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~  247 (303)
                      ++++++||+++|||+.....+     ......+.+.+.+    .++++++|+|++++.+++++...|+.||++++.+.+.
T Consensus       148 i~~~ivrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~----~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          148 FSWTYISPSAMFEPGERTGDY-----QIGKDHLLFGSDG----NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             SCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred             ccEEEEeCcceecCCCccCce-----EeccccceecCCC----CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence            999999999999984322111     1122333333332    3589999999999999999888899999999988776


Q ss_pred             HH
Q psy4233         248 SE  249 (303)
Q Consensus       248 ~e  249 (303)
                      .|
T Consensus       219 ~~  220 (221)
T 3ew7_A          219 HH  220 (221)
T ss_dssp             --
T ss_pred             cc
Confidence            65

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=1.7e-32  Score=233.35  Aligned_cols=214  Identities=13%  Similarity=0.033  Sum_probs=179.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||+||||||||+||++++++|+++|++|++++|+......        .+++++.+|++|++++.++++++|+|||+|+.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--------AHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--------TTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--------CCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            5689999999999999999999999999999997643211        35899999999999999999999999999998


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-------CCCCCCCCCCchhHHHHHHHHHHHh----h
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-------PPTYYISGGSQFYRTKYQGEKEVLR----E  166 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------~~~~~~~~~~~y~~~K~~~e~~~~~----~  166 (303)
                      .........+++|+.++.++++++++.++++||++||..+|+.       .|+.|..+.+.|+.+|..+|.+++.    .
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  153 (267)
T 3ay3_A           74 SVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKF  153 (267)
T ss_dssp             CSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHc
Confidence            6555667789999999999999999999999999999998864       2445566778999999999999875    3


Q ss_pred             CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      +++++++||+.+|+...                     .+... .++++++|+|++++.+++++...+++|++.++...+
T Consensus       154 gi~~~~lrp~~v~~~~~---------------------~~~~~-~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (267)
T 3ay3_A          154 DIETLNIRIGSCFPKPK---------------------DARMM-ATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTES  211 (267)
T ss_dssp             CCCEEEEEECBCSSSCC---------------------SHHHH-HHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSC
T ss_pred             CCCEEEEeceeecCCCC---------------------CCCee-eccccHHHHHHHHHHHHhCCCCCceeEecCCCcccc
Confidence            79999999999984211                     01112 578999999999999998765545689999888889


Q ss_pred             HHHHHHHHHHHhcCCCC
Q psy4233         247 LSELLDWFHVVMKKGEP  263 (303)
Q Consensus       247 ~~e~~~~i~~~~g~~~~  263 (303)
                      +.|+.+.  +.+|.++.
T Consensus       212 ~~d~~~~--~~lg~~p~  226 (267)
T 3ay3_A          212 WWDNDKS--AFLGWVPQ  226 (267)
T ss_dssp             CBCCGGG--GGGCCCCC
T ss_pred             ccCHHHH--HHcCCCCC
Confidence            9998887  78887654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=100.00  E-value=1.7e-31  Score=218.13  Aligned_cols=203  Identities=12%  Similarity=0.065  Sum_probs=161.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +|+|+||||||+||++++++|+++|++|++++|++......     ...+++++.+|+.|++++.++++++|+|||+++.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   77 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----cCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence            47999999999999999999999999999999975432211     0256999999999999999999999999999997


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecc
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD  177 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~  177 (303)
                      .....   ..++|+.++.++++++++.+++++|++||.++++.....+. +..+|+.+|..+|++++..+++++++||+.
T Consensus        78 ~~~~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~  153 (206)
T 1hdo_A           78 RNDLS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-RLQAVTDDHIRMHKVLRESGLKYVAVMPPH  153 (206)
T ss_dssp             TTCCS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-GGHHHHHHHHHHHHHHHHTCSEEEEECCSE
T ss_pred             CCCCC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-cchhHHHHHHHHHHHHHhCCCCEEEEeCCc
Confidence            54322   34688999999999999999999999999999886443321 457899999999999999999999999999


Q ss_pred             eeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233         178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK  243 (303)
Q Consensus       178 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  243 (303)
                      + +++......           ..... +... .++++++|+|++++.+++++...|++|++++++
T Consensus       154 ~-~~~~~~~~~-----------~~~~~-~~~~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          154 I-GDQPLTGAY-----------TVTLD-GRGP-SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             E-ECCCCCSCC-----------EEESS-SCSS-CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             c-cCCCCCcce-----------Eeccc-CCCC-CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            7 433211000           00011 1111 378999999999999999876778999999875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=100.00  E-value=5.6e-32  Score=238.91  Aligned_cols=226  Identities=13%  Similarity=0.045  Sum_probs=175.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecC-CCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYH-PRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~D~vi~   93 (303)
                      +++|+|+|||||||||++++++|+++|++|++++|+..+.. ..+.   ..++++++.+| ++|++++.++++++|+|||
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            44689999999999999999999999999999999765321 1111   12468999999 9999999999999999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCc--cCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCE
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALN--ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA  170 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~--~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~  170 (303)
                      +++...       .+.|..+ ++++++|++.+ +++|||+||.+  .++.      .+..+|+.+|..+|+++++.++++
T Consensus        80 ~a~~~~-------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------~~~~~y~~sK~~~E~~~~~~gi~~  145 (352)
T 1xgk_A           80 NTTSQA-------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------WPAVPMWAPKFTVENYVRQLGLPS  145 (352)
T ss_dssp             CCCSTT-------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------CCCCTTTHHHHHHHHHHHTSSSCE
T ss_pred             cCCCCC-------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------CCCccHHHHHHHHHHHHHHcCCCE
Confidence            987542       1335555 89999999999 99999999986  3432      234789999999999999999999


Q ss_pred             EEEeecceeeCCCchhhHHHHHHH---hhhcce--eeecCCCceeeCceeH-HHHHHHHHHHhcCCC--CCCcEEEEeCC
Q psy4233         171 TIFRPSDMYGSGDKFLRYYGHMWR---HVFRKL--AVYKKGEETIKQPVYV-GDVAAAIVAACKDPD--AAGKIYQAVGP  242 (303)
Q Consensus       171 ~ilrp~~~~G~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~i~~-~Dva~~~~~~~~~~~--~~g~~~~i~~~  242 (303)
                      +++||+ +||++....  ...++.   ...+..  .+++++.+. ++++++ +|+|++++.++.++.  ..|++||+++ 
T Consensus       146 ~ivrpg-~~g~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-  220 (352)
T 1xgk_A          146 TFVYAG-IYNNNFTSL--PYPLFQMELMPDGTFEWHAPFDPDIP-LPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-  220 (352)
T ss_dssp             EEEEEC-EEGGGCBSS--SCSSCBEEECTTSCEEEEESSCTTSC-EEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-
T ss_pred             EEEecc-eecCCchhc--ccccccccccCCCceEEeeccCCCCc-eeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-
Confidence            999986 678754311  000110   012222  335555666 799999 899999999998642  2578999985 


Q ss_pred             cccCHHHHHHHHHHHhcCCCC
Q psy4233         243 KRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       243 ~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +.+|+.|+++.+++.+|++..
T Consensus       221 ~~~s~~e~~~~i~~~~G~~~~  241 (352)
T 1xgk_A          221 ETLSPVQVCAAFSRALNRRVT  241 (352)
T ss_dssp             EEECHHHHHHHHHHHHTSCEE
T ss_pred             CCCCHHHHHHHHHHHHCCCCc
Confidence            679999999999999999865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.5e-32  Score=241.43  Aligned_cols=239  Identities=14%  Similarity=0.091  Sum_probs=168.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--cchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +|+|||||||||||++|+++|+++|++|++++|+......  .+.......+++++.+|+.|.+++.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            6799999999999999999999999999999997543211  01111112468999999999999999999999999999


Q ss_pred             ccCcc--ccc-hhhhhhhcchHHHHHHHHHhcC-CceEEEEecCcc-C-----C----CCCCC--------CCCCC-Cch
Q psy4233          96 GREFA--TKN-FTIADANVEIPARLARLSKEMG-VEKFIHISALNA-D-----P----NPPTY--------YISGG-SQF  152 (303)
Q Consensus        96 ~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~-~-----~----~~~~~--------~~~~~-~~y  152 (303)
                      +....  ..+ ..++++|+.++.+++++|++.+ +++|||+||.++ +     +    .+|+.        |..+. .+|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            86422  223 3488999999999999999986 899999999873 2     1    11221        11111 269


Q ss_pred             hHHHHHHHHHHHh----hCCCEEEEeecceeeCCCch--hhHHHHHHHh-hhcceeeecCCCc-----eeeCceeHHHHH
Q psy4233         153 YRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKF--LRYYGHMWRH-VFRKLAVYKKGEE-----TIKQPVYVGDVA  220 (303)
Q Consensus       153 ~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~i~~~Dva  220 (303)
                      +.+|..+|++++.    .+++++++||+++|||+...  ...+..+... .+... .++.+.+     ..++|+|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHH
Confidence            9999999998765    48999999999999997532  1111111110 11111 1111000     113799999999


Q ss_pred             HHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         221 AAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       221 ~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      ++++.+++++.. +..|++++ +.+|+.|+++.+.+.++
T Consensus       248 ~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          248 RAHIFVAEKESA-SGRYICCA-ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHCTTC-CEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCc-CCcEEEec-CCCCHHHHHHHHHHhCC
Confidence            999999986544 44787765 56999999999999876

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-33  Score=230.05  Aligned_cols=204  Identities=17%  Similarity=0.184  Sum_probs=165.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++|+|+||||||+||++++++|+++|+  +|++++|++..  .       .++++++.+|+.|++++.+++  +|+|||+
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--~-------~~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--E-------HPRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--C-------CTTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--c-------CCCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            467999999999999999999999998  99999998654  1       246889999999998888777  9999999


Q ss_pred             cccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCC-EE
Q psy4233          95 IGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE-AT  171 (303)
Q Consensus        95 a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~-~~  171 (303)
                      ++...  ...+..++++|+.++.++++++++.+++++|++||.++++       .+.++|+.+|..+|++++..+++ ++
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-------~~~~~y~~sK~~~e~~~~~~~~~~~~  145 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------KSSIFYNRVKGELEQALQEQGWPQLT  145 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------TCSSHHHHHHHHHHHHHTTSCCSEEE
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-------CCccHHHHHHHHHHHHHHHcCCCeEE
Confidence            99743  2456678899999999999999999999999999999987       35579999999999999999999 99


Q ss_pred             EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHH
Q psy4233         172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~  248 (303)
                      ++||+.+|||.... ..+..+   .....++ +++  . +++++++|+|++++.+++++.  +++||+++++.+++.
T Consensus       146 ~vrp~~v~g~~~~~-~~~~~~---~~~~~~~-~~~--~-~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          146 IARPSLLFGPREEF-RLAEIL---AAPIARI-LPG--K-YHGIEACDLARALWRLALEEG--KGVRFVESDELRKLG  212 (215)
T ss_dssp             EEECCSEESTTSCE-EGGGGT---TCCCC-----C--H-HHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHHHHH
T ss_pred             EEeCceeeCCCCcc-hHHHHH---HHhhhhc-cCC--C-cCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHHHhh
Confidence            99999999997541 111111   1112222 222  3 689999999999999998764  679999988766554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-32  Score=238.89  Aligned_cols=230  Identities=19%  Similarity=0.177  Sum_probs=175.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc--ccc---chhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ||+|+||||||+||++++++|+++|++|++++|+....  .+.   +... ...+++++.+|++|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            67899999999999999999999999999999975432  111   1111 12469999999999999999999999999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhCCCE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREFPEA  170 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~~~~  170 (303)
                      |+++...           +.++.+++++|++++ +++||+ |+.+... .+..+..| ...| .+|..+|+++++.++++
T Consensus        83 ~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~-~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~  148 (308)
T 1qyc_A           83 STVGSLQ-----------IESQVNIIKAIKEVGTVKRFFP-SEFGNDV-DNVHAVEPAKSVF-EVKAKVRRAIEAEGIPY  148 (308)
T ss_dssp             ECCCGGG-----------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCT-TSCCCCTTHHHHH-HHHHHHHHHHHHHTCCB
T ss_pred             ECCcchh-----------hhhHHHHHHHHHhcCCCceEee-cccccCc-cccccCCcchhHH-HHHHHHHHHHHhcCCCe
Confidence            9998632           556789999999998 999984 5433222 12222233 2457 99999999999999999


Q ss_pred             EEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-cccCHHH
Q psy4233         171 TIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRYLLSE  249 (303)
Q Consensus       171 ~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e  249 (303)
                      +++||+.++|+............ ...+.+.+++++... +++++++|+|++++.++.++...++.|++.++ +.+|+.|
T Consensus       149 ~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e  226 (308)
T 1qyc_A          149 TYVSSNCFAGYFLRSLAQAGLTA-PPRDKVVILGDGNAR-VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNE  226 (308)
T ss_dssp             EEEECCEEHHHHTTTTTCTTCSS-CCSSEEEEETTSCCE-EEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHH
T ss_pred             EEEEeceeccccccccccccccC-CCCCceEEecCCCce-EEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHH
Confidence            99999999875321110000000 033456777777777 89999999999999999876556778998865 6899999


Q ss_pred             HHHHHHHHhcCCCCC
Q psy4233         250 LLDWFHVVMKKGEPD  264 (303)
Q Consensus       250 ~~~~i~~~~g~~~~~  264 (303)
                      +++.+++.+|++..+
T Consensus       227 ~~~~~~~~~g~~~~~  241 (308)
T 1qyc_A          227 LVALWEKKIDKTLEK  241 (308)
T ss_dssp             HHHHHHHHTTSCCEE
T ss_pred             HHHHHHHHhCCCCce
Confidence            999999999998663

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.98  E-value=5.1e-32  Score=236.13  Aligned_cols=225  Identities=15%  Similarity=0.147  Sum_probs=173.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +++|+||||||+||++++++|+++|++|++++|+.......+... ...+++++.+|+.|++++.++++++|+|||+++.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEF-QSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHh-hcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            348999999999999999999999999999999864222211110 0146999999999999999999999999999985


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhCCCEEEEee
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREFPEATIFRP  175 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~~~~~ilrp  175 (303)
                      ..           +.++++++++|++.+ +++||+ |+.+... .+..+..| ...| .+|..+|+++++.+++++++||
T Consensus        90 ~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~-~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~  155 (318)
T 2r6j_A           90 PQ-----------ILDQFKILEAIKVAGNIKRFLP-SDFGVEE-DRINALPPFEALI-ERKRMIRRAIEEANIPYTYVSA  155 (318)
T ss_dssp             GG-----------STTHHHHHHHHHHHCCCCEEEC-SCCSSCT-TTCCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEEC
T ss_pred             hh-----------hHHHHHHHHHHHhcCCCCEEEe-eccccCc-ccccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEc
Confidence            32           556789999999998 999985 4333211 12222222 2457 9999999999999999999999


Q ss_pred             cceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-cccCHHHHHH
Q psy4233         176 SDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRYLLSELLD  252 (303)
Q Consensus       176 ~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~  252 (303)
                      +.++++   +   +..+...  ..+.+.+++++... +++++++|+|++++.++.++...++.|++.++ +.+|+.|+++
T Consensus       156 ~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~  228 (318)
T 2r6j_A          156 NCFASY---F---INYLLRPYDPKDEITVYGTGEAK-FAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELIS  228 (318)
T ss_dssp             CEEHHH---H---HHHHHCTTCCCSEEEEETTSCCE-EEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             ceehhh---h---hhhhccccCCCCceEEecCCCce-eeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHH
Confidence            988753   1   1122211  34456677777766 89999999999999999876556778888764 7899999999


Q ss_pred             HHHHHhcCCCCC
Q psy4233         253 WFHVVMKKGEPD  264 (303)
Q Consensus       253 ~i~~~~g~~~~~  264 (303)
                      .+++.+|++..+
T Consensus       229 ~~~~~~g~~~~~  240 (318)
T 2r6j_A          229 RWEKKIGKKFKK  240 (318)
T ss_dssp             HHHHHHTCCCEE
T ss_pred             HHHHHhCCCCce
Confidence            999999998663

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.98  E-value=8.7e-32  Score=233.38  Aligned_cols=230  Identities=18%  Similarity=0.146  Sum_probs=174.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC------cccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF------YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~------~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ||+|+||||||+||++++++|+++|++|++++|+..      .....+... ...+++++.+|+.|++++.++++++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNY-QSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHH-HhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            679999999999999999999999999999999751      111111110 1146899999999999999999999999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhCCC
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREFPE  169 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~~~  169 (303)
                      ||+++...           +.++.+++++|++++ +++||+ |+.+... .+..+..| .+.| .+|..+|++++..+++
T Consensus        81 i~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~-~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~  146 (307)
T 2gas_A           81 ICAAGRLL-----------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDV-DRHDAVEPVRQVF-EEKASIRRVIEAEGVP  146 (307)
T ss_dssp             EECSSSSC-----------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCT-TSCCCCTTHHHHH-HHHHHHHHHHHHHTCC
T ss_pred             EECCcccc-----------cccHHHHHHHHHhcCCceEEee-cccccCc-ccccCCCcchhHH-HHHHHHHHHHHHcCCC
Confidence            99998642           456789999999998 999984 4333221 12222233 3467 9999999999999999


Q ss_pred             EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-cccCHH
Q psy4233         170 ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRYLLS  248 (303)
Q Consensus       170 ~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~  248 (303)
                      ++++||+.++++............ ...+.+.+++++... +++++++|+|++++.++.++...++.|++.++ +.+|+.
T Consensus       147 ~~~lrp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~  224 (307)
T 2gas_A          147 YTYLCCHAFTGYFLRNLAQLDATD-PPRDKVVILGDGNVK-GAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQN  224 (307)
T ss_dssp             BEEEECCEETTTTGGGTTCTTCSS-CCSSEEEEETTSCSE-EEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHH
T ss_pred             eEEEEcceeecccccccccccccc-CCCCeEEEecCCCcc-eEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHH
Confidence            999999999876432111000000 023456677777766 89999999999999999876556778888765 689999


Q ss_pred             HHHHHHHHHhcCCCCC
Q psy4233         249 ELLDWFHVVMKKGEPD  264 (303)
Q Consensus       249 e~~~~i~~~~g~~~~~  264 (303)
                      |+++.+++.+|++..+
T Consensus       225 e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          225 EVIALWEKKIGKTLEK  240 (307)
T ss_dssp             HHHHHHHHHHTSCCEE
T ss_pred             HHHHHHHHHhCCCCce
Confidence            9999999999998663

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.98  E-value=7.1e-32  Score=223.44  Aligned_cols=210  Identities=16%  Similarity=0.149  Sum_probs=158.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ||||||||||+||++++++|+++|++|++++|+...... +.    .++++++.+|++|+++  +.+.++|+|||+||..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD-RL----GATVATLVKEPLVLTE--ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HT----CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc-cc----CCCceEEecccccccH--hhcccCCEEEECCccC
Confidence            589999999999999999999999999999997543221 11    1469999999999888  7889999999999975


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-C--------CCCCCCCCchhHHHHHHHHHH---Hhh
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-P--------TYYISGGSQFYRTKYQGEKEV---LRE  166 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-~--------~~~~~~~~~y~~~K~~~e~~~---~~~  166 (303)
                      ...   ...+.|+.++.++++++++.+ +++|++||.+++... .        +..+.+.+.|+.+|...|.+.   +..
T Consensus        74 ~~~---~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           74 WGS---GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             TTS---SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             CCc---chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            221   245779999999999999999 899999998664321 1        122234789999999999652   235


Q ss_pred             CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      +++++++||+++|||+.... +     ......++.   +... .++++++|+|++++.+++++...|++|++++.++..
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~-~-----~~~~~~~~~---~~~~-~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATS-Y-----VAGKDTLLV---GEDG-QSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCC-E-----EEESSBCCC---CTTS-CCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccC-c-----eeccccccc---CCCC-CceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            89999999999999854321 1     001112222   2333 589999999999999999888889999999987765


Q ss_pred             HHH
Q psy4233         247 LSE  249 (303)
Q Consensus       247 ~~e  249 (303)
                      +.+
T Consensus       220 ~~~  222 (224)
T 3h2s_A          220 HHH  222 (224)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.98  E-value=9.9e-32  Score=234.58  Aligned_cols=228  Identities=14%  Similarity=0.108  Sum_probs=174.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC-Cc----ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN-FY----DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ||+|+||||||+||++++++|+++|++|++++|+. ..    ....+... ...+++++.+|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEF-RSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHh-hcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            67899999999999999999999999999999985 21    11111100 11469999999999999999999999999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhCCCE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREFPEA  170 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~~~~  170 (303)
                      |+++...           +.++.+++++|++.+ +++||+ |+.+.. ..+..+..+ .+.| .+|..+|++++..++++
T Consensus        83 ~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~-~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~  148 (321)
T 3c1o_A           83 SALPFPM-----------ISSQIHIINAIKAAGNIKRFLP-SDFGCE-EDRIKPLPPFESVL-EKKRIIRRAIEAAALPY  148 (321)
T ss_dssp             ECCCGGG-----------SGGGHHHHHHHHHHCCCCEEEC-SCCSSC-GGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCB
T ss_pred             ECCCccc-----------hhhHHHHHHHHHHhCCccEEec-cccccC-ccccccCCCcchHH-HHHHHHHHHHHHcCCCe
Confidence            9998632           567789999999998 999983 432211 111122222 3468 99999999999999999


Q ss_pred             EEEeecceeeCCCchhhHHHHHH--HhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC-CcccCH
Q psy4233         171 TIFRPSDMYGSGDKFLRYYGHMW--RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG-PKRYLL  247 (303)
Q Consensus       171 ~ilrp~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~-~~~~s~  247 (303)
                      +++||+.++++..   ..+....  ....+.+.+++++... +++++++|+|++++.++.++...|+.|++.+ ++.+|+
T Consensus       149 ~~lrp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~  224 (321)
T 3c1o_A          149 TYVSANCFGAYFV---NYLLHPSPHPNRNDDIVIYGTGETK-FVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQ  224 (321)
T ss_dssp             EEEECCEEHHHHH---HHHHCCCSSCCTTSCEEEETTSCCE-EEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEH
T ss_pred             EEEEeceeccccc---cccccccccccccCceEEecCCCcc-eeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccH
Confidence            9999999886521   1111100  0134456777777776 8999999999999999987665677899987 478999


Q ss_pred             HHHHHHHHHHhcCCCCC
Q psy4233         248 SELLDWFHVVMKKGEPD  264 (303)
Q Consensus       248 ~e~~~~i~~~~g~~~~~  264 (303)
                      .|+++.+++.+|++..+
T Consensus       225 ~e~~~~~~~~~g~~~~~  241 (321)
T 3c1o_A          225 NELISLWEAKSGLSFKK  241 (321)
T ss_dssp             HHHHHHHHHHHTSCCCE
T ss_pred             HHHHHHHHHHcCCccee
Confidence            99999999999998763

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=6.6e-30  Score=214.10  Aligned_cols=208  Identities=18%  Similarity=0.143  Sum_probs=161.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++|+|+||||||+||++++++|+++|+  +|++++|++...... .    .++++++.+|++|++++.++++++|+|||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-A----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-G----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-c----cCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            5678999999999999999999999999  999999986533221 1    13588999999999999999999999999


Q ss_pred             ccccCcc-ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCC-EE
Q psy4233          94 LIGREFA-TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE-AT  171 (303)
Q Consensus        94 ~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~-~~  171 (303)
                      +||.... ..+...+++|+.++.++++++++.++++||++||.++++       .+..+|+.+|..+|.+++..+.+ ++
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-------~~~~~Y~~sK~~~e~~~~~~~~~~~~  163 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------SSNFLYLQVKGEVEAKVEELKFDRYS  163 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------TCSSHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-------CCcchHHHHHHHHHHHHHhcCCCCeE
Confidence            9997422 234578899999999999999999999999999999987       34578999999999999999994 99


Q ss_pred             EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                      ++||+.+|||..... ....+........+..   ... ..+++++|+|++++.++.++...+ .|++.+
T Consensus       164 ~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~---~~~-~~~~~~~dva~~~~~~~~~~~~~~-~~~~~~  227 (242)
T 2bka_A          164 VFRPGVLLCDRQESR-PGEWLVRKFFGSLPDS---WAS-GHSVPVVTVVRAMLNNVVRPRDKQ-MELLEN  227 (242)
T ss_dssp             EEECCEEECTTGGGS-HHHHHHHHHHCSCCTT---GGG-GTEEEHHHHHHHHHHHHTSCCCSS-EEEEEH
T ss_pred             EEcCceecCCCCCCc-HHHHHHHHhhcccCcc---ccC-CcccCHHHHHHHHHHHHhCccccC-eeEeeH
Confidence            999999999965321 1111111111122211   111 358999999999999998765534 666644

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.96  E-value=7.2e-28  Score=201.08  Aligned_cols=202  Identities=14%  Similarity=0.058  Sum_probs=149.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +.|+||+||||||||+||++++++|+++| ++|++++|+........     ..+++++.+|++|++++.++++++|+||
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~vv   93 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----PTNSQIIMGDVLNHAALKQAMQGQDIVY   93 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----cCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence            34567899999999999999999999999 89999999864432211     2469999999999999999999999999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----CCCCCchhHHHHHHHHHHHhhCC
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----ISGGSQFYRTKYQGEKEVLREFP  168 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----~~~~~~y~~~K~~~e~~~~~~~~  168 (303)
                      |+++....          ...+.++++++++.++++||++||.++|+......    ......+...+..+|+.++..++
T Consensus        94 ~~a~~~~~----------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  163 (236)
T 3qvo_A           94 ANLTGEDL----------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGL  163 (236)
T ss_dssp             EECCSTTH----------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCS
T ss_pred             EcCCCCch----------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCC
Confidence            99985321          12466899999999999999999999987532211    01122445667778888888999


Q ss_pred             CEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeCCcc
Q psy4233         169 EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKR  244 (303)
Q Consensus       169 ~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~  244 (303)
                      +++++|||.++++.....              .....+......+++.+|+|++++.++.++. ..++.|++++++.
T Consensus       164 ~~~~vrPg~i~~~~~~~~--------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          164 EYTILRPAWLTDEDIIDY--------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             EEEEEEECEEECCSCCCC--------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CEEEEeCCcccCCCCcce--------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            999999999998743211              1111111111357999999999999998766 5788999998864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.96  E-value=2.1e-27  Score=196.19  Aligned_cols=198  Identities=15%  Similarity=0.090  Sum_probs=151.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH-hCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLG-KQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |++|+||||||+||++++++|+ ++|++|++++|++.+..+.+.  ....+++++.+|++|.+++.++++++|+|||++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI--IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH--HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc--cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            4569999999999999999999 899999999997541222221  0125699999999999999999999999999998


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----CCCCC-chhHHHHHHHHHHHhhCCCEE
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----ISGGS-QFYRTKYQGEKEVLREFPEAT  171 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----~~~~~-~y~~~K~~~e~~~~~~~~~~~  171 (303)
                      ..           |+. ++++++++++.++++||++||.+++.......    ..... .|+.+|..+|++++..+++++
T Consensus        83 ~~-----------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~  150 (221)
T 3r6d_A           83 ES-----------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYT  150 (221)
T ss_dssp             CC-----------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEE
T ss_pred             CC-----------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEE
Confidence            64           334 88999999999999999999999987421100    01112 799999999999999999999


Q ss_pred             EEeecceeeCC-CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh--cCCC-CCCcEEEEeCCc
Q psy4233         172 IFRPSDMYGSG-DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC--KDPD-AAGKIYQAVGPK  243 (303)
Q Consensus       172 ilrp~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~--~~~~-~~g~~~~i~~~~  243 (303)
                      ++|||+++++. ...              ......+......+++.+|+|++++.++  .++. ..++.+.+.++.
T Consensus       151 ~vrpg~v~~~~~~~~--------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          151 ILRLTWLYNDPEXTD--------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEEECEEECCTTCCC--------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             EEechhhcCCCCCcc--------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            99999999872 211              1111111111134799999999999999  7654 367788887654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=3.3e-27  Score=201.71  Aligned_cols=235  Identities=11%  Similarity=0.037  Sum_probs=173.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +.+++++|+||||+|+||++++++|+++|++|++++|+...............+++++.+|++|.+++.++++       
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3456789999999999999999999999999999998743322211111212369999999999999988876       


Q ss_pred             ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      ++|+|||+||....          +.....+++|+.++.++++++..    .+..+||++||..++....    .+...|
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~Y  167 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----GVSHVY  167 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----TSCHHH
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----CCCcch
Confidence            68999999996421          23346889999999999998865    3567999999999886421    134689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      +.+|...|.+++..       +++++++|||.++++..... ..............+     ... ..+++++|+|++++
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~dva~~~~  241 (278)
T 2bgk_A          168 TATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-----NLK-GTLLRAEDVADAVA  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-----SSC-SCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-----ccc-cccCCHHHHHHHHH
Confidence            99999999887763       78999999999999854321 100111110001111     111 45899999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      .++..+  ...|+.|++.++..+++.|+++.+.+.+
T Consensus       242 ~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            999653  3468899999999999999999887653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=1.3e-26  Score=198.47  Aligned_cols=234  Identities=18%  Similarity=0.077  Sum_probs=167.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      |++++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..+++++.+|++|.+++.++++       
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY--PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC--TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            3456789999999999999999999999999999999754433222221  2469999999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|+|||+||....        +.....+++|+.+    ++.++..+++.+..+||++||...+..     ..+...|+.
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~  153 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----FAGFSAYSA  153 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----CTTCHHHHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----CCCchHHHH
Confidence            68999999996321        2334678999999    555555567777789999999888753     245578999


Q ss_pred             HHHHHHHHHHh-------hCCCEEEEeecceeeCCCch--------hhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         155 TKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKF--------LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       155 ~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      +|..+|.+.+.       .++++++++||.+++|....        ...+..... ......   ..... ..+.+++|+
T Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~dv  228 (281)
T 3m1a_A          154 TKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG-PTRQLV---QGSDG-SQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH-HHHHHH---HC------CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH-HHHHHH---hhccC-CCCCCHHHH
Confidence            99999988765       37899999999998864211        111111111 001111   11122 467899999


Q ss_pred             HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      |++++.+++++.. +..|+++++......+....+.+.++.
T Consensus       229 a~a~~~~~~~~~~-~~~~~l~s~~~~~i~g~~~~i~~~~~~  268 (281)
T 3m1a_A          229 AAAIRLALDTEKT-PLRLALGGDAVDFLTGHLDSVRAELTE  268 (281)
T ss_dssp             HHHHHHHHHSSSC-CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCC-CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence            9999999987654 669999888777778877777776654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=7.7e-28  Score=202.89  Aligned_cols=213  Identities=12%  Similarity=-0.002  Sum_probs=159.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~   93 (303)
                      |++|+||||+|+||++++++|+++|++|++++|+......            .+.+|+.|.+++.++++    ++|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            4689999999999999999999999999999997543211            15789999999988886    6999999


Q ss_pred             ccccCc-cccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCC---------------------CC
Q psy4233          94 LIGREF-ATKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYY---------------------IS  147 (303)
Q Consensus        94 ~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~---------------------~~  147 (303)
                      +||... ...+...+++|+.++.++++++...    +.+++|++||..++......+                     ..
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            999765 5667789999999999999987654    567999999999986431100                     12


Q ss_pred             CCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         148 GGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      +...|+.+|..+|.+++.       .+++++++|||.++||.....  +....  .......+. + .. .++++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~--~~~~~--~~~~~~~~~-~-~~-~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS--KADPR--YGESTRRFV-A-PL-GRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH--HHCTT--THHHHHSCC-C-TT-SSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc--ccchh--hHHHHHHHH-H-Hh-cCCCCHHHHH
Confidence            446899999999998876       379999999999998743211  00000  001111111 1 22 4789999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcccCHHH
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKRYLLSE  249 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e  249 (303)
                      ++++.++.++  ...|+.|++.++..+++.|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999865  3468899999998776654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=4.1e-26  Score=195.06  Aligned_cols=229  Identities=11%  Similarity=0.018  Sum_probs=157.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh----cCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+....    .....++.++.+|++|++++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999975332211111    1112458899999999999988876     


Q ss_pred             --ccCEEEEccccCc------------cccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCcc-CCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREF------------ATKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNA-DPNPPTYYIS  147 (303)
Q Consensus        87 --~~D~vi~~a~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~-~~~~~~~~~~  147 (303)
                        ++|+|||+||...            .+..+..+++|+.++.++++++...    + .+||++||... +..     ..
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~~  157 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA-----TP  157 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC-----CT
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC-----CC
Confidence              7999999998632            2234467899999999999887653    5 79999999887 542     12


Q ss_pred             CCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh----hHH---HHHHHhhhcceeeecCCCceeeCc
Q psy4233         148 GGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL----RYY---GHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      ....|+.+|...+.+.+.       .++++++++||.+++|.....    ...   ...........|.        ..+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~  229 (278)
T 1spx_A          158 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA--------GVM  229 (278)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT--------SSC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC--------cCC
Confidence            346799999999988765       379999999999998753211    000   0001101111111        247


Q ss_pred             eeHHHHHHHHHHHhcCCC---CCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         214 VYVGDVAAAIVAACKDPD---AAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~~---~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      .+.+|+|++++.++..+.   ..|+.+++.+|..+++.|+++.+.+.+
T Consensus       230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             CCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            899999999999987532   458999999999999999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=3.4e-26  Score=192.96  Aligned_cols=220  Identities=14%  Similarity=0.120  Sum_probs=162.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++|+||||+|+||++++++|+++|++|++++|+........... ....++.++.+|++|++++.++++      
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4567889999999999999999999999999999999754322111111 112468899999999999988876      


Q ss_pred             -ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|+|||+||....       ......+++|+.++.++++++.    +.+.++||++||...+..     ..+...|+.
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~  161 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----NINMTSYAS  161 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----CCCCcccHH
Confidence             79999999996432       2335678899999999988874    456789999999988753     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...|.+++..       +++++++|||.++++..... .............|+        ..+++++|+|++++.++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITPEIEQKMLQHTPI--------RRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CCHHHHHHHHHTCSS--------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc-cChHHHHHHHhcCCc--------ccCCCHHHHHHHHHHHh
Confidence            999999887763       68999999999998742210 001111111111221        35789999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcccCH
Q psy4233         228 KDPD--AAGKIYQAVGPKRYLL  247 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~~s~  247 (303)
                      ..+.  ..|++|++.++..+|+
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCCCC
T ss_pred             CCccccCCCcEEEECCceeccC
Confidence            7532  3588999999988775

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=5.4e-26  Score=190.53  Aligned_cols=215  Identities=14%  Similarity=0.037  Sum_probs=158.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~v   91 (303)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.....+....   .++++++.+|++|.+++.+++++   +|+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            46678999999999999999999999999999999975332211111   13578889999999999998874   7999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||+||....        +.....+++|+.++.++++++...    + .++||++||..++...     .+...|+.+|..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a  155 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----PNLITYSSTKGA  155 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----TTBHHHHHHHHH
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----CCcchhHHHHHH
Confidence            999995321        233468899999999998887653    5 5799999999887632     234689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      .|.+++..       +++++++|||.+++|..........++.......+       . .++++++|+|++++.++..+.
T Consensus       156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1cyd_A          156 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP-------L-RKFAEVEDVVNSILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST-------T-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC-------c-cCCCCHHHHHHHHHHHhCchh
Confidence            99988763       68999999999998743211001111111111111       1 578999999999999997542


Q ss_pred             --CCCcEEEEeCCccc
Q psy4233         232 --AAGKIYQAVGPKRY  245 (303)
Q Consensus       232 --~~g~~~~i~~~~~~  245 (303)
                        ..|+.+++.++...
T Consensus       228 ~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          228 ASTSGGGILVDAGYLA  243 (244)
T ss_dssp             TTCCSSEEEESTTGGG
T ss_pred             hcccCCEEEECCCccC
Confidence              36889999887643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=4.3e-26  Score=195.25  Aligned_cols=235  Identities=16%  Similarity=0.126  Sum_probs=173.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cC-CCCceEEEecCCCCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CG-DLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~-~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+....   .+ ...+++++.+|++|++++.++++    
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999975432222111   11 11268999999999998887765    


Q ss_pred             ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         ++|++||+||....         +.+...+++|+.++.++++++...    +-.+||++||...+..     .....
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  162 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-----HRWFG  162 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-----CTTCT
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC-----CCCCh
Confidence               47999999996211         233568889999999999987543    3349999999987652     23457


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       ++++..++||.+++|...................|+        ..+.+++|+|+++
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~r~~~~~dva~~~  234 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL--------PRQGEVEDVANMA  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS--------SSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC--------CCCCCHHHHHHHH
Confidence            8999999999988763       589999999999987543211111111111112221        3468999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCcccC-HHHHHHHHHHHhcCCC
Q psy4233         224 VAACKDPD--AAGKIYQAVGPKRYL-LSELLDWFHVVMKKGE  262 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~~~s-~~e~~~~i~~~~g~~~  262 (303)
                      ++++....  ..|+.+++.+|..++ ..++.+.+.+.+|.+.
T Consensus       235 ~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          235 MFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            99997532  369999999998876 8889999999988764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.93  E-value=1.8e-25  Score=189.49  Aligned_cols=220  Identities=16%  Similarity=0.076  Sum_probs=159.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-C-CCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-D-LGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++++++++||||+|+||++++++|+++|++|++++|+.....+...... . ..++.++.+|++|++++.++++     
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999997533221111110 0 1458899999999999888776     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        ++|+|||+||....        +.+...+++|+.++.++++++.    +.+..+||++||...+...     .....|
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  157 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----WYEPIY  157 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----CCcchH
Confidence              68999999996321        2335678999999999888774    4466799999999887632     334689


Q ss_pred             hHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhH---------HHHHHHhhhcc-eeeecCCCceeeCcee
Q psy4233         153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY---------YGHMWRHVFRK-LAVYKKGEETIKQPVY  215 (303)
Q Consensus       153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~i~  215 (303)
                      +.+|...+.+.+.       .++++++++||.+++|.......         ........... .|       . ..+.+
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~  229 (263)
T 3ai3_A          158 NVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP-------I-KRFAS  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT-------T-CSCBC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC-------C-CCCcC
Confidence            9999999988765       37899999999999874321100         00111100011 11       1 35799


Q ss_pred             HHHHHHHHHHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         216 VGDVAAAIVAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      .+|+|++++.++..+.  ..|+.|++.+|..+|
T Consensus       230 ~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          230 PEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            9999999999997543  368899999887665

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.93  E-value=1.1e-25  Score=190.49  Aligned_cols=223  Identities=11%  Similarity=-0.008  Sum_probs=161.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|++++.++++       ++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999754332222222  2458999999999999888776       68


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |+|||+||....        +.....+++|+.++.++++++...    + ..+||++||...+...     .....|+.+
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  158 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----ALVAIYCAT  158 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----CCChHHHHH
Confidence            999999996322        234567889999999999987542    2 3599999999886531     334689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+..       ++++..++||.+++|..............  .......++.+... ..+.+++|+|++++++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L  237 (259)
T 4e6p_A          159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGMAIFL  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCC-CCCcCHHHHHHHHHHH
Confidence            99999888763       68999999999998864322111111100  00111111112222 5689999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCcccC
Q psy4233         227 CKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +...  ...|++|++.+|..+|
T Consensus       238 ~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          238 ASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TSGGGTTCCSCEEEESTTSSCC
T ss_pred             hCCccCCCCCCEEEECcChhcC
Confidence            8643  2368999999987654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.4e-24  Score=183.69  Aligned_cols=209  Identities=11%  Similarity=-0.021  Sum_probs=160.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+......        .+++++.+|++|++++.++++       
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------PDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------TTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------CceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            33567899999999999999999999999999999997543221        358999999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++    ++.+..++|++||..++...   +..+...|+.
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~~~Y~~  172 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---VGMPSALASL  172 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---TTCCCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---CCCccHHHHH
Confidence            68999999996322        234568889999999999987    45667799999998776421   2234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+++|..... . ...   .....|       . ..+.+++|+|++++.+.
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~-~~~---~~~~~p-------~-~r~~~~~dva~av~~L~  239 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-T-HST---LAGLHP-------V-GRMGEIRDVVDAVLYLE  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-G-HHH---HHTTST-------T-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-H-HHH---HhccCC-------C-CCCcCHHHHHHHHHHhc
Confidence            999999888763       68999999999999864321 1 111   111122       1 45789999999999996


Q ss_pred             cCCCCCCcEEEEeCCcccC
Q psy4233         228 KDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s  246 (303)
                      +.....|+++++.+|...+
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HCTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCcEEEECCCeecc
Confidence            6555689999999887654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.93  E-value=3.5e-26  Score=197.73  Aligned_cols=234  Identities=18%  Similarity=0.129  Sum_probs=168.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-C-CCceEEEecCCCCHHHHHHHhcc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-D-LGQVLFQPYHPRNDDEIRKAIKY----   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~~~~~~~~~----   87 (303)
                      +++++++++||||+|+||++++++|+++|++|++++|+.....+...... . ..+++++.+|++|.+++.++++.    
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            34677899999999999999999999999999999997543221111100 0 24689999999999998887764    


Q ss_pred             ---cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          88 ---SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        88 ---~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         +|+|||+||....        ......+++|+.++.++++++..     .+..++|++||..++..     ..+...
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~  176 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----SGFVVP  176 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----CTTCHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----CCCcch
Confidence               5999999995321        23456889999999999887743     34569999999877542     134568


Q ss_pred             hhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCC-c-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGD-K-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       152 y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      |+.+|...|.+.+.       .+++++++|||.+++++. . ...... .........|       . ..+.+++|+|++
T Consensus       177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~p-------~-~~~~~~~dva~~  247 (302)
T 1w6u_A          177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-FEKEMIGRIP-------C-GRLGTVEELANL  247 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH-HHHHHHTTCT-------T-SSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh-hHHHHHhcCC-------c-CCCCCHHHHHHH
Confidence            99999999998776       368999999999998732 1 100000 0000111122       1 347899999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      ++.++..+.  ..|+.|++.++..+++.++++.+.+..|+.
T Consensus       248 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~  288 (302)
T 1w6u_A          248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQ  288 (302)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred             HHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcccc
Confidence            999997532  268899999999889888888887776554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=1.8e-24  Score=182.93  Aligned_cols=219  Identities=12%  Similarity=0.064  Sum_probs=158.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++|+||||+|+||++++++|+++|++|++++|+.....+.... .....+++++.+|++|.+++.++++      
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            446678999999999999999999999999999999975432211111 1112468999999999999888775      


Q ss_pred             -ccCEEEEccccCc-c--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREF-A--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~-~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|+|||+||... .        ......+++|+.++.++++++..    .+..++|++||...+...   +..+...|
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~~~Y  165 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---RPQQQAAY  165 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---SSSCCHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---CCCCcccc
Confidence             5899999999643 1        12246789999999999988754    456799999998776432   22234689


Q ss_pred             hHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...|.+++.       .+++++++|||.+++|...................+       . ..+++.+|+|++++.
T Consensus       166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~  237 (260)
T 3awd_A          166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP-------M-GRVGQPDEVASVVQF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT-------T-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC-------c-CCCCCHHHHHHHHHH
Confidence            9999999998875       378999999999999865411000111111111112       1 357899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCc
Q psy4233         226 ACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++..+  ...|+.|++.++.
T Consensus       238 l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCchhccCCCcEEEECCce
Confidence            99753  3368899998875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=4.5e-25  Score=184.93  Aligned_cols=215  Identities=13%  Similarity=0.043  Sum_probs=157.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~v   91 (303)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.....+....   .++++++.+|++|.+++.++++   ++|+|
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---CPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            45678999999999999999999999999999999974322211111   1357788999999999999886   48999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||+||....        +..+..+++|+.++.++++++...    + ..++|++||...+..     ..+...|+.+|..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a  155 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----VTNHSVYCSTKGA  155 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHHHHHHHHH
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----CCCCchHHHHHHH
Confidence            999996322        233568899999999988887553    5 579999999988753     2345689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .|.+++..       ++++++++||.++++...................+       . ..+++++|+|++++.++..+ 
T Consensus       156 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 3d3w_A          156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP-------L-GKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT-------T-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC-------C-CCCcCHHHHHHHHHHHcCccc
Confidence            99988763       68999999999998753211000000000111111       1 46899999999999999753 


Q ss_pred             -CCCCcEEEEeCCccc
Q psy4233         231 -DAAGKIYQAVGPKRY  245 (303)
Q Consensus       231 -~~~g~~~~i~~~~~~  245 (303)
                       ...|+.|++.++...
T Consensus       228 ~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          228 GMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence             236889999887643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=2.1e-24  Score=181.52  Aligned_cols=213  Identities=15%  Similarity=0.062  Sum_probs=155.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||++++++|+++|++|++++|+.....+....  .....+++++.+|++|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999975432211111  1112468999999999999988876       68


Q ss_pred             CEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          89 NVVINLIGREFA-----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        89 D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      |+|||+||....           +.....+++|+.++.++++++    ++.+.+++|++||...+..     ..+...|+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~  156 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-----FPGRSAYT  156 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTCHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----CCCchhHH
Confidence            999999986322           123467889999987766655    4456789999999987653     13456899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+++..       +++++++|||.+++|..........+........|       . ..+.+.+|+|++++.+
T Consensus       157 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l  228 (250)
T 2cfc_A          157 TSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP-------Q-KEIGTAAQVADAVMFL  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT-------T-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence            9999999887763       78999999999999865421000111111111111       1 3478999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCc
Q psy4233         227 CKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~  243 (303)
                      +..+.  ..|+.+++.+|.
T Consensus       229 ~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          229 AGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HSTTCTTCCSCEEEESTTG
T ss_pred             cCchhhcccCCEEEECCce
Confidence            97643  358899998775

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=4.5e-25  Score=187.08  Aligned_cols=221  Identities=13%  Similarity=0.064  Sum_probs=153.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC--------CCceEEEecCCCCHHHHHHHhc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD--------LGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.....+.......        ..+++++.+|++|.+++.++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999975432221111110        0358899999999999888776


Q ss_pred             c-------c-CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCC
Q psy4233          87 Y-------S-NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        87 ~-------~-D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      +       + |+|||+||....        ......+++|+.++.++++++...    + ..+||++||...+..     
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  158 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-----  158 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC-----
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC-----
Confidence            5       3 999999996422        234568899999999999987653    4 469999999865431     


Q ss_pred             CCCCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      ..+...|+.+|...+.+.+.       .+++++++|||.+++|.....  ............+       . ..+.+.+|
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~d  228 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIP-------M-GHLGDPED  228 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCT-------T-CSCBCHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc--CHHHHHHHHHhCC-------C-CCCCCHHH
Confidence            13457899999999887765       378999999999999864321  1111110111111       1 34789999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCcccCHHHH
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPKRYLLSEL  250 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e~  250 (303)
                      +|++++.++..+  ...|+.+++.++..++...+
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            999999998753  24688999999887665544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=8.4e-25  Score=182.93  Aligned_cols=204  Identities=13%  Similarity=0.067  Sum_probs=155.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------ccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~v   91 (303)
                      +++|+||||+|+||++++++|+++|++|++++|+..  .         .+++++.+|++|.+++.++++      ++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            579999999999999999999999999999999754  1         236889999999999998887      68999


Q ss_pred             EEccccCccc------------cchhhhhhhcchHHHHHHHHHhcC----------CceEEEEecCccCCCCCCCCCCCC
Q psy4233          92 INLIGREFAT------------KNFTIADANVEIPARLARLSKEMG----------VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        92 i~~a~~~~~~------------~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                      ||+||.....            .....+++|+.++.++++++...-          ..+||++||...+...     .+.
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~  145 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-----IGQ  145 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-----TTC
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----CCC
Confidence            9999963221            345688999999999999886531          1299999999886531     345


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       +++++++|||.++++......  ...........++.       ..+++.+|+|++
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~dva~~  216 (242)
T 1uay_A          146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFP-------PRLGRPEEYAAL  216 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSS-------CSCCCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc--hhHHHHHHhhCCCc-------ccCCCHHHHHHH
Confidence            78999999999877653       789999999999987422111  11111111222221       247899999999


Q ss_pred             HHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         223 IVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       223 ~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      ++.++..+...|+.|++.+|..++
T Consensus       217 ~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          217 VLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHhcCCCCCCcEEEEcCCeecC
Confidence            999998755679999999887654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=2.4e-24  Score=182.68  Aligned_cols=217  Identities=16%  Similarity=0.112  Sum_probs=159.7

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..+++++.+|++|.+++.++++      
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            45677889999999999999999999999999999999865433222211  1468999999999999988876      


Q ss_pred             -ccCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHHHhc----------CCceEEEEecCccCCCC
Q psy4233          87 -YSNVVINLIGREFA--------------TKNFTIADANVEIPARLARLSKEM----------GVEKFIHISALNADPNP  141 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~Ss~~~~~~~  141 (303)
                       ++|+|||+||....              +.....+++|+.++.++++++...          +..+||++||...+.. 
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-  163 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-  163 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC-
Confidence             69999999996321              223468889999999999988754          5679999999987642 


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCce
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                          ..+...|+.+|...+.+.+..       ++++++++||.+.++.......  ..........+..       ..++
T Consensus       164 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~-------~~~~  230 (265)
T 2o23_A          164 ----QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLASQVPFP-------SRLG  230 (265)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSS-------CSCB
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH--HHHHHHHHcCCCc-------CCCC
Confidence                134568999999988877653       7899999999998874321110  0000011112210       2468


Q ss_pred             eHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233         215 YVGDVAAAIVAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      +.+|+|++++.++..+...|+.+++.++..+
T Consensus       231 ~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          231 DPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            9999999999999876668999999888654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.92  E-value=5.5e-25  Score=179.12  Aligned_cols=180  Identities=19%  Similarity=0.130  Sum_probs=143.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi~~   94 (303)
                      +|+|+||||+|+||++++++|+ +|++|++++|+..                .+.+|++|++++.+++++   +|+|||+
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            4689999999999999999999 9999999999742                368999999999988876   8999999


Q ss_pred             cccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233          95 IGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        95 a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      ||....        +.....+++|+.++.++++++...   + .++|++||...+..     ..+...|+.+|...|.++
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~-----~~~~~~Y~~sK~~~~~~~  139 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP-----IVQGASAAMANGAVTAFA  139 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC-----CCccHHHHHHHHHHHHHH
Confidence            995322        122356789999999999999876   4 69999999877652     234568999999999988


Q ss_pred             Hhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEE
Q psy4233         164 LRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY  237 (303)
Q Consensus       164 ~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~  237 (303)
                      +..      +++++++||+.++++...           ....       ... .++++++|+|++++.++. ....|++|
T Consensus       140 ~~~~~e~~~gi~v~~v~pg~v~~~~~~-----------~~~~-------~~~-~~~~~~~dva~~~~~~~~-~~~~G~~~  199 (202)
T 3d7l_A          140 KSAAIEMPRGIRINTVSPNVLEESWDK-----------LEPF-------FEG-FLPVPAAKVARAFEKSVF-GAQTGESY  199 (202)
T ss_dssp             HHHTTSCSTTCEEEEEEECCBGGGHHH-----------HGGG-------STT-CCCBCHHHHHHHHHHHHH-SCCCSCEE
T ss_pred             HHHHHHccCCeEEEEEecCccCCchhh-----------hhhh-------ccc-cCCCCHHHHHHHHHHhhh-ccccCceE
Confidence            763      689999999999977321           0111       112 568999999999999885 44568888


Q ss_pred             EEe
Q psy4233         238 QAV  240 (303)
Q Consensus       238 ~i~  240 (303)
                      ++.
T Consensus       200 ~vd  202 (202)
T 3d7l_A          200 QVY  202 (202)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=1.4e-24  Score=183.05  Aligned_cols=217  Identities=13%  Similarity=0.067  Sum_probs=154.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCce-EEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV-LFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++ +++.+|++|.+++.++++      
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            4567789999999999999999999999999999999754322111111  1245 889999999999888763      


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|+|||+||....        +..+..+++|+.++.++++++    ++.+.++||++||...+...   |..+...|+.
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~~~Y~~  161 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---RPQFASSYMA  161 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---SSSCBHHHHH
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---CCCcchHHHH
Confidence            58999999996322        123467889999977766655    45567899999999876532   2223368999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...|.+++..       +++++++|||.++++...................+       . ..+++.+|+|++++.++
T Consensus       162 sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~  233 (254)
T 2wsb_A          162 SKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP-------M-GRCGEPSEIAAAALFLA  233 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST-------T-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHh
Confidence            999999887653       78999999999998743211100111111111111       1 35799999999999998


Q ss_pred             cCC--CCCCcEEEEeCCc
Q psy4233         228 KDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~  243 (303)
                      ..+  ...|+.+++.+|.
T Consensus       234 ~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          234 SPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             SGGGTTCCSCEEEESTTG
T ss_pred             CcccccccCCEEEECCCE
Confidence            653  2468899998774

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.92  E-value=5.7e-25  Score=186.72  Aligned_cols=220  Identities=16%  Similarity=0.072  Sum_probs=147.3

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-----
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-----   85 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-----   85 (303)
                      .++++++++|+||||+|+||++++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.+++     
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            345567889999999999999999999999999999999754322211111 11245889999999999888776     


Q ss_pred             ---cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          86 ---KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        86 ---~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         .++|+|||+||....        +.....+++|+.++.++++++    ++.+.++||++||..++..     ..+..
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~  162 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----ASVGS  162 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------CC
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----CCCCc
Confidence               458999999996321        233467899999999999988    4567789999999887652     13457


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+++..       +++++++|||.+++|...... ............+       . ..+++.+|+|+++
T Consensus       163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~-------~-~~~~~~~dva~~~  233 (266)
T 1xq1_A          163 IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKP-------L-GRFGEPEEVSSLV  233 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCC-------C-CCCcCHHHHHHHH
Confidence            8999999999888653       799999999999998543211 0001000001111       1 2478999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCccc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +.++..+  ...|+.+++.+|..+
T Consensus       234 ~~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          234 AFLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHHcCccccCccCcEEEEcCCccc
Confidence            9999743  236889999888653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=7.8e-24  Score=178.10  Aligned_cols=217  Identities=12%  Similarity=0.005  Sum_probs=149.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      |++++++++||||+|+||.+++++|+++|++|++++|+...  ..       .++.++.+|++|++++.++++       
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~-------~~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--EQ-------YPFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--SC-------CSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--hc-------CCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45678899999999999999999999999999999997542  10       127889999999999988876       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|+|||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..     ......|+.
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~  148 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----RIGMSAYGA  148 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----CTTCHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----CCCCchHHH
Confidence            58999999996322        234578899999999999988    4556679999999988752     234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..       ++++++++||.+++|.......-..... ........+...... ..+.+.+|+|++++++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l  227 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFL  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCC-CCCcCHHHHHHHHHHH
Confidence            999999887763       7999999999999875321100000000 000000000000111 2478999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCccc
Q psy4233         227 CKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +..+  ...|+.+++.+|..+
T Consensus       228 ~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          228 ASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCccccCCCCCEEEECCCccc
Confidence            9753  346889999887643

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.92  E-value=9.3e-25  Score=184.82  Aligned_cols=221  Identities=12%  Similarity=0.068  Sum_probs=160.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .++++++++||||+|+||++++++|+++|++|++++|+.....+.... .....++.++.+|++|.+++.++++      
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            346678999999999999999999999999999999975432211111 1112458899999999998887765      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|+|||+||....         +.+...+++|+.++.++++++.    +.+..+||++||...+..     ..+...|
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y  164 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----FPNLGPY  164 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----CTTBHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----CCCchhH
Confidence             68999999996321         2234688999999988888764    456779999999988753     2334689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++++++||.+.++.......-...........+       . ..+.+.+|+|+++++
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~v~~  236 (260)
T 2zat_A          165 NVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR-------I-RRLGNPEDCAGIVSF  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHT-------C-SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCC-------C-CCCCCHHHHHHHHHH
Confidence            99999999988763       78999999999988753211000000000111111       1 357899999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCcccCH
Q psy4233         226 ACKDPD--AAGKIYQAVGPKRYLL  247 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~~~s~  247 (303)
                      ++..+.  ..|+++++.+|...|+
T Consensus       237 l~s~~~~~~tG~~~~vdgG~~~s~  260 (260)
T 2zat_A          237 LCSEDASYITGETVVVGGGTASRL  260 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTCCCCC
T ss_pred             HcCcccCCccCCEEEECCCccccC
Confidence            997543  3688999999887653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.92  E-value=1.6e-24  Score=183.39  Aligned_cols=220  Identities=15%  Similarity=0.049  Sum_probs=158.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------   85 (303)
                      +++++++++||||+|+||++++++|+++|++|++++|+.....+..... ....+++++.+|++|++++.+++       
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567889999999999999999999999999999999754322111111 11246889999999999888877       


Q ss_pred             -cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          86 -KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        86 -~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       .++|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..     ......|
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y  159 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----VPYEAVY  159 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----CTTCHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----CCCcchH
Confidence             459999999996321        234568899999999999988    3456679999999887642     1334689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh---hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL---RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +.+|...+.+.+..       ++++++++||.+.++.....   ......+.......|       . ..+.+.+|+|++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dvA~~  231 (260)
T 2ae2_A          160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA-------L-RRMGEPKELAAM  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST-------T-CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC-------C-CCCCCHHHHHHH
Confidence            99999999988763       68999999999987531110   000000000111111       1 357999999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ++.++..+  ...|+.+++.+|...+
T Consensus       232 v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          232 VAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHcCccccCCCCCEEEECCCcccc
Confidence            99998743  2368899998886554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=3.4e-25  Score=188.22  Aligned_cols=226  Identities=12%  Similarity=0.035  Sum_probs=159.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+......   ...++.++.+|++|++++.++++.     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            456799999999999999999999999999999997543221111111   123588999999999998887754     


Q ss_pred             --cCEEEEccccCccccchhhhhhhcchHHHH----HHHHHhcC---CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          88 --SNVVINLIGREFATKNFTIADANVEIPARL----ARLSKEMG---VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        88 --~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~---~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                        +|+|||+||..........+++|+.++..+    +..+++.+   ..+||++||...+...     .....|+.+|..
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a  159 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----AQQPVYCASKHG  159 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----CCCchHHHHHHH
Confidence              699999999876677778899999866554    44444432   5699999999887531     234679999999


Q ss_pred             HHHHHHh---------hCCCEEEEeecceeeCCCchhhHHHHHHH--hhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         159 GEKEVLR---------EFPEATIFRPSDMYGSGDKFLRYYGHMWR--HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       159 ~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+.+.+.         .++++++++||.+.+|.......-...-.  .....+.   ..... ..+++.+|+|++++.++
T Consensus       160 ~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          160 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK---DMIKY-YGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH---HHHHH-HCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH---HHhcc-ccCCCHHHHHHHHHHHh
Confidence            9987764         26899999999998753111000000000  0000000   00011 34789999999999999


Q ss_pred             cCCCCCCcEEEEeCCcccCHHHH
Q psy4233         228 KDPDAAGKIYQAVGPKRYLLSEL  250 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s~~e~  250 (303)
                      ..+...|+++++.+++.+++.|+
T Consensus       236 s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          236 EDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HCTTCSSCEEEEETTTEEEECCC
T ss_pred             cCcCCCCcEEEecCCCcccccCc
Confidence            87667899999999988777654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.92  E-value=1.5e-24  Score=182.04  Aligned_cols=214  Identities=14%  Similarity=0.110  Sum_probs=158.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+..+..+...  ......++.++.+|++|.+++.++++       
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            356799999999999999999999999999998886543322211  11112468899999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +.++..+++|+.++.++++++    ++.+..+||++||...+..     ..+...|+.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~  156 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-----NPGQANYVA  156 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----CTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----CCCChHHHH
Confidence            68999999996421        233468999999999999988    5556679999999876532     134578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+.+|......  ...........|+        ..+.+.+|+|+++++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~--------~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          157 TKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS--DELKEQMLTQIPL--------ARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC--HHHHHHHHTTCTT--------CSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC--HHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence            999999887653       689999999999987543211  1111111122221        35789999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcc
Q psy4233         228 KDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~  244 (303)
                      ..+.  ..|+.+++.+|..
T Consensus       227 s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          227 SDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CccccCCCCCEEEeCCCcc
Confidence            7543  3589999988753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.2e-24  Score=180.46  Aligned_cols=217  Identities=13%  Similarity=0.061  Sum_probs=154.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..+++++.+|++|.+++.++++       
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3456789999999999999999999999999999999865433322221  2468999999999999888776       


Q ss_pred             ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc----------CCceEEEEecCccCCCCCCC
Q psy4233          87 YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM----------GVEKFIHISALNADPNPPTY  144 (303)
Q Consensus        87 ~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~Ss~~~~~~~~~~  144 (303)
                      ++|++||+||....            +.+...+++|+.++.++++++...          +..+||++||...+..    
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~----  156 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG----  156 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC----
Confidence            68999999996421            234567899999999999988653          3458999999887642    


Q ss_pred             CCCCCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         145 YISGGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                       ......|+.+|...+.+.+.       .++++..++||.+.+|......  ...........|+.       ..+.+.+
T Consensus       157 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~-------~r~~~~~  226 (257)
T 3tpc_A          157 -QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFP-------PRLGRAE  226 (257)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSS-------CSCBCHH
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCC-------CCCCCHH
Confidence             13456899999999987665       3789999999999987533111  11111011112210       2478999


Q ss_pred             HHHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         218 DVAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       218 Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      |+|++++++++.....|+.+++.+|..++
T Consensus       227 dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          227 EYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            99999999998766689999999887654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=1.3e-24  Score=182.75  Aligned_cols=216  Identities=15%  Similarity=0.099  Sum_probs=154.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+.....+.........+++++.+|++|.+++.++++.       
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4667899999999999999999999999999999997543222111111124689999999999998887764       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCC-ceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGV-EKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||+||....        +.....+++|+.++.++.+++    ++.+. ++||++||...+...     .+...|+.
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~Y~~  157 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----PSLGAYNA  157 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----TTCHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----CCCccchH
Confidence            8999999996322        223468889999777665554    45566 799999999887531     34568999


Q ss_pred             HHHHHHHHHHh---------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLR---------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+.         .+++++++|||++++|....... ...........       .. ..+++.+|+|++++.
T Consensus       158 sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~-------~~-~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          158 SKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKT-------PM-GHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTC-------TT-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc-hhhhHHHhhcC-------CC-CCCcCHHHHHHHHHH
Confidence            99999987763         36899999999999874221110 00000001111       11 357999999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCcc
Q psy4233         226 ACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++..+.  ..|+.+++.+|..
T Consensus       229 l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          229 LASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HcCcccccccCcEEEECCCcc
Confidence            997532  3688999988764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=2.4e-24  Score=182.47  Aligned_cols=219  Identities=12%  Similarity=0.015  Sum_probs=160.2

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ++++++++++||||+|+||.+++++|+++|++|++++|+.....+......  ...++.++.+|++|++++.++++    
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            445678899999999999999999999999999999997543222211111  11468999999999999888765    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         ++|++||+||....        +.....+++|+.++.++++++...    +..++|++||......    +......
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----~~~~~~~  160 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----GYPGWSH  160 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----CCTTCHH
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----CCCCChh
Confidence               68999999996322        233467899999999998887653    6679999999876421    1134568


Q ss_pred             hhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+.       .++++..++||.+++|.....  ...........+|.        ..+.+.+|+|++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~--------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPA--------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTT--------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence            99999999988876       379999999999998632111  01111111222221        24689999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++..+  ...|+.+++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            999753  247999999988764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.92  E-value=6e-24  Score=180.16  Aligned_cols=216  Identities=12%  Similarity=-0.003  Sum_probs=156.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       +
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--ENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--TTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999753322211111  1258899999999999988876       6


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||+||....        +.....+++|+.++.++++++..    .+ ..+||++||...+...     .....|+.
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~  161 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----PLLAHYSA  161 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----TTCHHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----CCchhHHH
Confidence            8999999996322        23456889999999999887754    34 5799999998876421     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH----H-----HHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY----Y-----GHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      +|...+.+.+..       ++++++++||.+++|.......    .     ...........|       . ..+++.+|
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~d  233 (263)
T 3ak4_A          162 SKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP-------L-GRIEEPED  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT-------T-CSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC-------C-CCCcCHHH
Confidence            999999887653       7999999999998764221100    0     011000111111       1 35799999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +|++++.++..+  ...|+.|++.+|..+
T Consensus       234 vA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          234 VADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            999999999753  246889999887543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.92  E-value=1.2e-23  Score=179.06  Aligned_cols=212  Identities=12%  Similarity=0.017  Sum_probs=159.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       +
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999865433322222  2468899999999999888776       6


Q ss_pred             cCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 SNVVINLIGREFA----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 ~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      +|++||+||....          +.+...+++|+.++.++++++    ++.+..+||++||...+..     ......|+
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  160 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----YDMSTAYA  160 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----CSSCHHHH
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----CCCChHHH
Confidence            8999999997421          223468899999999999988    6666779999999988752     23457899


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+.       .++++..++||.+++|...... ............+.        ..+.+.+|+|++++++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~--------~r~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLA--------GRIGEPHEIAELVCFL  231 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            999999988775       3789999999999998543110 01111111112221        3468999999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +..+  ...|+.+++.+|
T Consensus       232 ~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          232 ASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCcccCCcCCCEEEECCC
Confidence            9753  237999999888

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=1.4e-24  Score=182.31  Aligned_cols=214  Identities=14%  Similarity=0.064  Sum_probs=154.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+............  ...+++++.+|++|++++.++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999997533211111100  02458999999999999988876      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||+||....        ......+++|+.++.++++++    ++.+.++||++||...+..     ..+...|+
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~  158 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG-----NVGQVNYS  158 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC-----CTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC-----CCCCchHH
Confidence             68999999996422        233468899999997666654    4557789999999865431     12346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++++++||.+++|.......  ..........+       . ..+++++|+|++++.+
T Consensus       159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE--EIKQKYKEQIP-------L-GRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH--HHHHHHHHTCT-------T-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccH--HHHHHHHhcCC-------C-CCccCHHHHHHHHHHH
Confidence            9999999887653       6899999999999875432111  11110111111       1 3578999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+.|++.++.
T Consensus       229 ~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          229 CSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCchhhcCCCcEEEeCCCc
Confidence            9753  3368899998763

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.92  E-value=1.7e-24  Score=181.65  Aligned_cols=213  Identities=15%  Similarity=0.106  Sum_probs=146.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|+++ .|+.....+.... .....+++++.+|++|++++.++++      
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4667899999999999999999999999999998 4543322111111 1112468999999999999888776      


Q ss_pred             -ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCcc-CCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNA-DPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y  152 (303)
                       ++|+|||+||...        .......+++|+.++.++++++..    .+..+||++||... ++.      .....|
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~~~~~Y  155 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------AGQANY  155 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------CHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------CCCcHh
Confidence             6899999998632        234567889999998888887653    46779999999854 442      234689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...|.+.+..       ++++++++||.+.++......  ...........+       . ..+++.+|+|++++.
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~  225 (247)
T 2hq1_A          156 AASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP--DKVKEMYLNNIP-------L-KRFGTPEEVANVVGF  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHHHHHHHTTST-------T-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc--hHHHHHHHhhCC-------C-CCCCCHHHHHHHHHH
Confidence            99999999888763       689999999999865221110  001110111111       1 357999999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCc
Q psy4233         226 ACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++..+  ...|+.|++.+|.
T Consensus       226 l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          226 LASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HcCcccccccCcEEEeCCCc
Confidence            98753  2368899998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=8.9e-24  Score=178.79  Aligned_cols=218  Identities=12%  Similarity=0.028  Sum_probs=156.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|++++|+..+..+... . .....+++++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999993332222111 1 1112468899999999999888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|+|||+||....        ......+++|+.++.++++++..    .+ ..+||++||...+..     ..+...|
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y  158 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----WPLFVHY  158 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----CTTCHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----CCCccHH
Confidence             68999999996422        23346789999999988887653    34 569999999877642     2445789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       +++++++|||.+++|...................+       . ..+++.+|+|++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~  230 (261)
T 1gee_A          159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP-------M-GYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT-------T-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC-------C-CCCcCHHHHHHHHHH
Confidence            99999888877652       79999999999998754321100111110111111       1 357899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCccc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++..+  ...|+.+++.++..+
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          231 LASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCCCcEEEEcCCccc
Confidence            98743  336889999888653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.92  E-value=4.8e-24  Score=181.62  Aligned_cols=219  Identities=12%  Similarity=0.043  Sum_probs=159.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|... ..+... ......+++++.+|++|.+++.++.+      
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            3466889999999999999999999999999999997532 111111 11223568999999999988877644      


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..     ......|+.
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----~~~~~~Y~a  180 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----GRNVAAYAA  180 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CSSCHHHHH
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----CCCChhHHH
Confidence            58999999996422        233568899999999999977    3456679999999988753     234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+++|...................|.        ..+.+.+|+|+++++++
T Consensus       181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~v~~L~  252 (273)
T 3uf0_A          181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA--------GRWATPEDMVGPAVFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT--------SSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHh
Confidence            999999887663       689999999999987543211111111111112221        34789999999999999


Q ss_pred             cCC--CCCCcEEEEeCCcccC
Q psy4233         228 KDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ...  ...|+.+++.+|..+|
T Consensus       253 s~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          253 SDAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CchhcCCcCCEEEECcCccCC
Confidence            753  3479999999886543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=6.8e-24  Score=179.00  Aligned_cols=219  Identities=12%  Similarity=0.096  Sum_probs=155.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.... .+.+.  ....++.++.+|++|++++.++++       +
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA--RHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH--TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH--hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999975411 11111  112458899999999999998887       6


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++.++.+++    ++.+..+||++||...+...     .....|+.+
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~s  154 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----TGKAAYVAA  154 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----CCchhHHHH
Confidence            9999999996321        233468899999776666654    56677899999999886531     234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH-HHHH---HHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY-YGHM---WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..       ++++++++||.+++|....... ....   .......  +....... ..+++++|+|++++
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-~~~~~~~dvA~~~~  231 (255)
T 2q2v_A          155 KHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHD--LLAEKQPS-LAFVTPEHLGELVL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHH--HHTTTCTT-CCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHH--HHhccCCC-CCCcCHHHHHHHHH
Confidence            99999888753       6899999999999874321100 0000   0000000  00111122 45899999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCcc
Q psy4233         225 AACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      +++..+.  ..|+.|++.++..
T Consensus       232 ~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          232 FLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCCccCCCCCCEEEECCCcc
Confidence            9987533  3588999988754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=2.7e-24  Score=183.24  Aligned_cols=216  Identities=16%  Similarity=0.109  Sum_probs=157.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +.+++++|+||||+|+||++++++|+++|++|++++|+.....+...  ......+++++.+|++|++++.++++     
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            44667899999999999999999999999999999994333222111  11112468899999999999988876     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccC-CCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNAD-PNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~-~~~~~~~~~~~~~y  152 (303)
                        ++|+|||+||....        ......+++|+.++.++++++...   + .+||++||..++ ..     ......|
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~-----~~~~~~Y  170 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG-----IPNHALY  170 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS-----CCSCHHH
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC-----CCCCchH
Confidence              68999999996422        223568899999999999988764   4 699999999887 32     1334689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-h--------HH--HHHHHhhhcceeeecCCCceeeCce
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-R--------YY--GHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                      +.+|...|.+++..       ++++++++||.++++..... .        ..  .....       .+..+... ..++
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~  242 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDE-------GLANMNPL-KRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHH-------HHHHTSTT-SSCB
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHH-------HHHhcCCC-CCcc
Confidence            99999999888763       79999999999987632100 0        00  00100       01111222 4689


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         215 YVGDVAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +++|+|++++.++..+.  ..|+.|++.+|.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999997532  368899998763

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.92  E-value=6.7e-24  Score=179.42  Aligned_cols=215  Identities=16%  Similarity=0.102  Sum_probs=154.3

Q ss_pred             CCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        11 ~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ..+|++++++++||||+|+||.+++++|+++|++|++++|+.....+.+..    .+++++.+|++|.+++.++++    
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----AGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----HTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----cCCeEEECCCCCHHHHHHHHHHHHH
Confidence            445667788999999999999999999999999999999986544333322    238899999999999888775    


Q ss_pred             ---ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 ---YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                         ++|++||+||....       +.....+++|+.++.++++++.    +.+..+||++||...+..     ......|
T Consensus        96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y  170 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----SSKHIAY  170 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----CSSCHHH
T ss_pred             hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----CCCcHhH
Confidence               48999999996422       2234688999999999998874    345569999999887653     2345689


Q ss_pred             hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +.+|...+.+.+..      ++++..++||.+..+..........    .....++        .-+.+.+|+|++++++
T Consensus       171 ~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~----~~~~~p~--------~r~~~~edva~~v~~L  238 (260)
T 3gem_A          171 CATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRAN----ALAKSAL--------GIEPGAEVIYQSLRYL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCS--------CCCCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHH----HHhcCCC--------CCCCCHHHHHHHHHHH
Confidence            99999999888764      4889999999998764321111111    1111111        2357799999999999


Q ss_pred             hcCCCCCCcEEEEeCCcccC
Q psy4233         227 CKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~~~~g~~~~i~~~~~~s  246 (303)
                      ++.....|+++++.+|..++
T Consensus       239 ~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          239 LDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHCSSCCSCEEEESTTTTTC
T ss_pred             hhCCCCCCCEEEECCCcccC
Confidence            97666689999999987664

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.92  E-value=6.2e-24  Score=181.72  Aligned_cols=226  Identities=18%  Similarity=0.132  Sum_probs=156.6

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hc-C-CCCceEEEecCCCCHHHHHHHhc---
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LC-G-DLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~-~-~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      .+++++++++||||+|+||.+++++|+++|++|++++|+..+..+... .. . ...++.++.+|++|.+++.++++   
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            345667899999999999999999999999999999995443322211 11 1 12568999999999999888775   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                          ++|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+...     ....
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  174 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-----PFKS  174 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCH
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----CCch
Confidence                58999999996322        234568899999999999987    45566799999998876531     3346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHH--HHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHM--WRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      .|+.+|...+.+.+..       ++++..++||.+.+|..... ......  ..........+..+... ..+++++|+|
T Consensus       175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~edvA  253 (281)
T 3v2h_A          175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITVEQVA  253 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT-CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC-CCccCHHHHH
Confidence            8999999999887653       68999999999998753211 000000  00000001112223333 5689999999


Q ss_pred             HHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++++.++..+.  ..|+.+++.+|..
T Consensus       254 ~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          254 SLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             HHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HHHHHHcCCCcCCCCCcEEEECCCcc
Confidence            99999997543  3699999988753

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.92  E-value=2.8e-24  Score=182.35  Aligned_cols=217  Identities=14%  Similarity=0.126  Sum_probs=157.2

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+  |+||.+++++|+++|++|++++|+. ...+..... ...++.+++.+|++|++++.++++      
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            456799999999  9999999999999999999999975 211111111 111235789999999999888776      


Q ss_pred             -ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                       ++|+|||+||....             +.....+++|+.++.++++++...-  -.+||++||...+..     .....
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  160 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----IPNYN  160 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTTT
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----CCCch
Confidence             57999999996431             2234688999999999999997642  249999999877642     13456


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       +++++.++||.+++|...................|+        ..+.+.+|+|+++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~dva~~v  232 (265)
T 1qsg_A          161 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------RRTVTIEDVGNSA  232 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--------SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC--------CCCCCHHHHHHHH
Confidence            8999999999988753       689999999999988543221111111111111221        2468999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         224 VAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ++++..+.  ..|+.+++.++..++
T Consensus       233 ~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          233 AFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhCchhcCccCCEEEECCCcCCC
Confidence            99997432  368899999886654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=3.6e-24  Score=181.28  Aligned_cols=220  Identities=12%  Similarity=0.116  Sum_probs=158.5

Q ss_pred             cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ++++++++||||+  |+||.+++++|+++|++|++++|+...  ..+.+..  ..+++.++.+|++|++++.++++    
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE--ALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHH--HTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--hcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999  999999999999999999999997531  1111111  11347899999999999888776    


Q ss_pred             ---ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                         ++|+|||+||....            +..+..+++|+.++.++++++...-  -.+||++||...+..     ....
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~  157 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----VPKY  157 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----CTTC
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----CCCc
Confidence               58999999996421            2334688999999999999997641  249999999877642     1334


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       +++++.++||.+++|...................|+        ..+.+.+|+|++
T Consensus       158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~dva~~  229 (261)
T 2wyu_A          158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL--------RRNITQEEVGNL  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT--------SSCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC--------CCCCCHHHHHHH
Confidence            67999999999887653       799999999999988543211111111111111221        236899999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcccCHHH
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKRYLLSE  249 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~~s~~e  249 (303)
                      ++.++...  ...|+.+++.++..++..|
T Consensus       230 v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            99999643  2368899999987665444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.92  E-value=4.8e-24  Score=180.78  Aligned_cols=219  Identities=15%  Similarity=0.129  Sum_probs=158.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .++++++||||+|+||.+++++|+++|++|+++.|+.....+.....  ....+++++.+|++|.+++.++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            34689999999999999999999999999999988765433322211  112468999999999999888776       


Q ss_pred             ccCEEEEcccc--C--------ccccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGR--E--------FATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~--~--------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      ++|+|||+||.  .        ..+.....+++|+.++.++++++    ++.+..++|++||.+.....   +..+...|
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~~~~Y  161 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---GWIYRSAF  161 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---CCTTCHHH
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---CCCCCchh
Confidence            68999999993  1        11233567899999999999988    56666799999998554221   12345689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++..++||.++++......  ...........|       . ..+.+.+|+|++++.
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p-------~-~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTP-------I-GRSGTGEDIARTISF  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC----------------CCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCC-------C-CCCcCHHHHHHHHHH
Confidence            99999999887653       689999999999987533211  111111111122       1 347899999999999


Q ss_pred             HhcCCC--CCCcEEEEeCCcccCH
Q psy4233         226 ACKDPD--AAGKIYQAVGPKRYLL  247 (303)
Q Consensus       226 ~~~~~~--~~g~~~~i~~~~~~s~  247 (303)
                      ++..+.  ..|+++++.+|-...+
T Consensus       232 l~s~~~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          232 LCEDDSDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             HHSGGGTTCCSCEEEESCSCCCCC
T ss_pred             HcCcccCCCCCcEEEEcCceeecc
Confidence            997543  3699999998866443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.92  E-value=4.5e-24  Score=182.68  Aligned_cols=228  Identities=10%  Similarity=0.038  Sum_probs=161.5

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-----------cccc-h-hcCCCCceEEEecCCCCHH
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-----------VRDL-R-LCGDLGQVLFQPYHPRNDD   79 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----------~~~~-~-~~~~~~~~~~~~~Dl~d~~   79 (303)
                      ++.+++++++||||+|+||.+++++|+++|++|++++|+....           .+.. . ......++.++.+|++|.+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            3456788999999999999999999999999999999974321           0110 0 1111256899999999999


Q ss_pred             HHHHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCC
Q psy4233          80 EIRKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPN  140 (303)
Q Consensus        80 ~~~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~  140 (303)
                      ++.++++       ++|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            9888775       68999999996321        233568889999999999986    3445679999999988753


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHH----h--hhcceeeecCCC
Q psy4233         141 PPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWR----H--VFRKLAVYKKGE  207 (303)
Q Consensus       141 ~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~----~--~~~~~~~~~~~~  207 (303)
                           ..+...|+.+|...+.+.+..       ++++..++||.+++|..........+..    .  ......+.....
T Consensus       165 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (281)
T 3s55_A          165 -----NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHL  239 (281)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCS
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhc
Confidence                 234568999999999887753       6899999999999986542111100000    0  000000001112


Q ss_pred             ceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         208 ETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       208 ~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      .. ..+.+.+|+|+++++++..+.  ..|+++++.+|...+
T Consensus       240 ~~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          240 QY-APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cC-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            22 468999999999999997543  369999999987654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.92  E-value=2.2e-24  Score=182.81  Aligned_cols=221  Identities=12%  Similarity=0.032  Sum_probs=159.5

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcc---
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKY---   87 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---   87 (303)
                      .+++++++|+||||+|+||++++++|+++|++|++++|+.....+.....  ....+++++.+|++|.+++.++++.   
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            35577889999999999999999999999999999999754432211111  0024689999999999988877653   


Q ss_pred             ----cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCC--CCCCCC
Q psy4233          88 ----SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPP--TYYISG  148 (303)
Q Consensus        88 ----~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~--~~~~~~  148 (303)
                          +|+|||+||....        +.....+++|+.++.++++++...    + ..+||++||..++....  ..+..+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  168 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT  168 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccc
Confidence                8999999996422        233457899999999999987542    3 36999999987764321  122234


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ...|+.+|...+.+++..       +++++++|||.++++..... ......   .....+.        ..+++.+|+|
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~dva  237 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDH---QASNIPL--------NRFAQPEEMT  237 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH---HHHTCTT--------SSCBCGGGGH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHH---HHhcCcc--------cCCCCHHHHH
Confidence            578999999999888663       78999999999998753321 111111   1111221        3478999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++++.++..+  ...|+.|++.+|..
T Consensus       238 ~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          238 GQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHhhccCchhcCcCcEEEecCCEe
Confidence            9999999753  24688999988864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.92  E-value=7.5e-24  Score=182.07  Aligned_cols=219  Identities=13%  Similarity=0.050  Sum_probs=160.1

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC--CCceEEEecCCCCHHHHHHHhc----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD--LGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      .+.+++++++||||+|+||.+++++|+++|++|++++|+.....+.......  ..++.++.+|++|.+++.++++    
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999999999986543322222211  1468999999999988887665    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         ++|++||+||....        +.+...+++|+.++.++++++    ++.+..+||++||......    +......
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----~~~~~~~  191 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----GYPGWSH  191 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----BCTTCHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----CCCCCHH
Confidence               47999999996322        233568899999999999987    4556679999999876421    1134578


Q ss_pred             hhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+.       .++++..++||.+++|.....  ...........+|+        ..+...+|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~--------~r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPM--------GMLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTT--------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCC--------CCCCCHHHHHHHHH
Confidence            99999999988775       279999999999998743211  11111111222221        23678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++...  ...|+++++.+|..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            999643  347999999988754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=2.9e-25  Score=181.38  Aligned_cols=183  Identities=11%  Similarity=0.049  Sum_probs=142.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~~a   95 (303)
                      |+++||||+|+||++++++|+++  +|++++|+...........   +. +++.+|++|++++.++++   ++|+|||+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV---GA-RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH---TC-EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc---cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999999999998  9999999743322111111   12 889999999999999988   799999999


Q ss_pred             ccCc--------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-
Q psy4233          96 GREF--------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-  166 (303)
Q Consensus        96 ~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-  166 (303)
                      |...        .......+++|+.++.++++++++.+.++||++||..++..     ..+...|+.+|...|.+++.. 
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~  149 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-----VPGFAAYAAAKGALEAYLEAAR  149 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-----STTBHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-----CCCcchHHHHHHHHHHHHHHHH
Confidence            9632        23445688999999999999997777789999999988742     234578999999999988763 


Q ss_pred             ------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         167 ------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       167 ------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                            +++++++|||.++++...            .       .+... ..+++++|+|++++.+++++..
T Consensus       150 ~~~~~~gi~v~~v~pg~v~t~~~~------------~-------~~~~~-~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          150 KELLREGVHLVLVRLPAVATGLWA------------P-------LGGPP-KGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHTTTCEEEEECCCCBCSGGGG------------G-------GTSCC-TTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHhhhCCEEEEEecCcccCCCcc------------c-------cCCCC-CCCCCHHHHHHHHHHHHhCCCC
Confidence                  799999999999977411            1       11122 5789999999999999986543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.92  E-value=2.7e-24  Score=181.37  Aligned_cols=215  Identities=13%  Similarity=0.023  Sum_probs=156.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCc-ccccchhcCCCCceEEEecCCCCH-HHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~-----   86 (303)
                      ++++++++||||+|+||.+++++|+++|++ |++++|+... ..+.+.......+++++.+|++|. +++.++++     
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            467889999999999999999999999997 9999997532 122222111124689999999998 87777665     


Q ss_pred             --ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcC-------CceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          87 --YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG-------VEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        87 --~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                        ++|+|||+||.......+..+++|+.++.++++++...-       ..++|++||...+..     ......|+.+|.
T Consensus        82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sK~  156 (254)
T 1sby_A           82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----IHQVPVYSASKA  156 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTSHHHHHHHH
T ss_pred             cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----CCCchHHHHHHH
Confidence              689999999987777778899999999999999886421       357999999988753     133468999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+.       .++++++++||.+.+|........   .. ........   ... ..+.+.+|+|++++.+++. 
T Consensus       157 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~-~~~~~~~~---~~~-~~~~~~~dvA~~i~~~~~~-  227 (254)
T 1sby_A          157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW---LD-VEPRVAEL---LLS-HPTQTSEQCGQNFVKAIEA-  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG---GG-SCTTHHHH---HTT-SCCEEHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchh---hh-hhHHHHHH---Hhc-CCCCCHHHHHHHHHHHHHc-
Confidence            99988765       379999999999987632110000   00 00000000   001 2346899999999999873 


Q ss_pred             CCCCcEEEEeCCc
Q psy4233         231 DAAGKIYQAVGPK  243 (303)
Q Consensus       231 ~~~g~~~~i~~~~  243 (303)
                      ...|+.|++.+|.
T Consensus       228 ~~~G~~~~v~gG~  240 (254)
T 1sby_A          228 NKNGAIWKLDLGT  240 (254)
T ss_dssp             CCTTCEEEEETTE
T ss_pred             CCCCCEEEEeCCc
Confidence            4568899999883

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.91  E-value=6e-24  Score=179.58  Aligned_cols=217  Identities=14%  Similarity=0.043  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++||||+|+||++++++|+++|++|+++ .|+.....+.... .....++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999987 5653322111111 1122468999999999999888775       3


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +..+..+++|+.++.++++++    ++.+..+||++||...+..     ......|+.+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  157 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----LENYTTVGVS  157 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----CCCcHHHHHH
Confidence            6999999985321        233467899999999999887    4455669999999988752     2345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++..++||.+.++...................|.        ..+.+.+|+|+++++++.
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~~~dva~~v~~L~s  229 (258)
T 3oid_A          158 KAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA--------GRMVEIKDMVDTVEFLVS  229 (258)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT--------SSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhC
Confidence            99999988763       689999999999877433211111111111122221        357899999999999998


Q ss_pred             CCC--CCCcEEEEeCCcccC
Q psy4233         229 DPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~~~s  246 (303)
                      .+.  ..|+.+++.+|....
T Consensus       230 ~~~~~itG~~i~vdGG~~~~  249 (258)
T 3oid_A          230 SKADMIRGQTIIVDGGRSLL  249 (258)
T ss_dssp             STTTTCCSCEEEESTTGGGB
T ss_pred             cccCCccCCEEEECCCccCC
Confidence            643  379999999886543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=7.3e-24  Score=178.89  Aligned_cols=219  Identities=11%  Similarity=0.065  Sum_probs=156.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||++++++|+++|++|++++|+... .+.....   .+ .++.+|++|++++.++++       +
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI---GG-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH---TC-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh---hC-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999998654 2211111   13 789999999998887765       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s  152 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----EQENAAYNAS  152 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----CTTBHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----CCCChhHHHH
Confidence            8999999996322        2235688999999999988774    345679999999877642     1334689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       +++++.++||.+.++...  ..+..... .......+...... ..+++.+|+|++++.++.
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~s  228 (256)
T 2d1y_A          153 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL--EAIALSPD-PERTRRDWEDLHAL-RRLGKPEEVAEAVLFLAS  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HHHC---------CHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh--hccccccC-CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999887753       689999999999865211  00000000 00000001111122 458999999999999997


Q ss_pred             CC--CCCCcEEEEeCCcccCH
Q psy4233         229 DP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~~s~  247 (303)
                      .+  ...|+.+++.+|...++
T Consensus       229 ~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          229 EKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             GGGTTCCSCEEEESTTGGGBC
T ss_pred             chhcCCCCCEEEECCCccccc
Confidence            54  24688999999876654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.91  E-value=1.3e-23  Score=177.81  Aligned_cols=208  Identities=15%  Similarity=0.087  Sum_probs=154.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+......  .+++++.+|++|++++.++++       ++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999997543222111111  248899999999999988877       69


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||+||....        +.....+++|+.++.+++++    +++.+..+||++||...+...     .+...|+.+|
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK  157 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----VACHGYTATK  157 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTBHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----CCchhHHHHH
Confidence            999999996322        23456889999999665554    455667799999999886531     2346899999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+.       .+++++++|||.+++|.....         . ..+.    .... ..+.+.+|+|++++.++..
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~-~~~~----~~~~-~~~~~~~dvA~~v~~l~s~  222 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV---------P-EDIF----QTAL-GRAAEPVEVSNLVVYLASD  222 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS---------C-TTCS----CCSS-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc---------h-hhHH----hCcc-CCCCCHHHHHHHHHHHhCc
Confidence            999988765       378999999999998743210         0 0110    0111 3578999999999999875


Q ss_pred             CC--CCCcEEEEeCCccc
Q psy4233         230 PD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       230 ~~--~~g~~~~i~~~~~~  245 (303)
                      +.  ..|+.|++.++...
T Consensus       223 ~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          223 ESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCcCCEEEECCCeec
Confidence            32  35889999988653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.91  E-value=2.6e-24  Score=181.30  Aligned_cols=216  Identities=12%  Similarity=0.068  Sum_probs=131.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....+++++.+|++|++++.++++      
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            556788999999999999999999999999999999975432222111 1123568999999999999888776      


Q ss_pred             -ccCEEEEccccC-----------ccccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGRE-----------FATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 -~~D~vi~~a~~~-----------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                       ++|+|||+||..           ..+.....+++|+.++.++.+++    ++.+..+||++||...+.        +..
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------~~~  156 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------YSN  156 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC--------CCc
Confidence             689999999862           11233568899999966666554    455667999999998873        346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       ++++..++||.+++|....... ........+..+       . ..+.+.+|+|+++
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~dva~~~  227 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLP-------L-SRMGTPDDLVGMC  227 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCC-------C-CCCCCHHHHHHHH
Confidence            7999999999887653       6889999999999875432111 011110111111       1 3467889999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         224 VAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      +.++..+.  ..|+.|++.+|..++
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHcCccccCCCCCEEEECCCeecC
Confidence            99997532  369999999887653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-23  Score=178.71  Aligned_cols=220  Identities=16%  Similarity=0.054  Sum_probs=155.5

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh------
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI------   85 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~------   85 (303)
                      ++++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.+++      
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            34567889999999999999999999999999999999753322111111 11246889999999999988776      


Q ss_pred             --cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          86 --KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        86 --~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        .++|++||+||....        +.....+++|+.++.++++++.    +.+..+||++||...+...     .....
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~~~  170 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----PSVSL  170 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----TTCHH
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----CCcch
Confidence              458999999996321        2344678899999999999873    4456799999999887631     33468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH----HHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY----YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      |+.+|...+.+.+..       ++++++++||.+++|.......    ............|.        ..+.+.+|+|
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dvA  242 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM--------GRAGKPQEVS  242 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--------CSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC--------CCCcCHHHHH
Confidence            999999999887653       7999999999999885321100    00111101111221        2478999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++++.++..+  ...|+.+++.+|..+
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCccccCcCCCEEEECCCccc
Confidence            9999998643  236899999888643

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.91  E-value=1.1e-23  Score=177.68  Aligned_cols=220  Identities=15%  Similarity=0.096  Sum_probs=161.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++      
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4467889999999999999999999999999999999754322211111 112568999999999998888775      


Q ss_pred             -ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|++||+||....       +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  162 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----NVRMASYGS  162 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----CCCchHHHH
Confidence             58999999996432       2345688999999999999873    445569999999988753     234578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+.+|...... ............|       . ..+.+.+|+|+++++++
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p-------~-~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTP-------L-GRLGEAQDIANAALFLC  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCT-------T-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHc
Confidence            999999888763       689999999999876321100 0011111111222       1 35789999999999999


Q ss_pred             cCC--CCCCcEEEEeCCcccCH
Q psy4233         228 KDP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~s~  247 (303)
                      ...  ...|+.+++.+|...++
T Consensus       234 s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSCCC-
T ss_pred             CCcccCccCCEEEECCCccccC
Confidence            743  33799999999887664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.91  E-value=2.2e-24  Score=182.10  Aligned_cols=215  Identities=12%  Similarity=0.052  Sum_probs=155.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC-CCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~-~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||+|+||++++++|+++|++|++++|+ .....+.... .....+++++.+|++|++++.++++      
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999998 4322111111 1112468999999999999988877      


Q ss_pred             -ccCEEEEcccc-Ccc--------ccchhhhhhhcchHHHHHHHHHh----cC--C---ceEEEEecCccCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGR-EFA--------TKNFTIADANVEIPARLARLSKE----MG--V---EKFIHISALNADPNPPTYYIS  147 (303)
Q Consensus        87 -~~D~vi~~a~~-~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~--~---~~~v~~Ss~~~~~~~~~~~~~  147 (303)
                       ++|+|||+||. ...        ......+++|+.++.++++++..    .+  .   .++|++||...+..    +..
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~  159 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----GGP  159 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----CCT
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----CCC
Confidence             79999999996 221        12345788999999998886632    22  2   69999999877541    113


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      +...|+.+|...|.+++..       +++++++|||.+++|.....  ............+       . ..+++++|+|
T Consensus       160 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~dva  229 (258)
T 3afn_B          160 GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIP-------M-GRFGTAEEMA  229 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCT-------T-CSCBCGGGTH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCC-------C-CcCCCHHHHH
Confidence            4578999999999987653       78999999999998753321  0111111111111       1 3589999999


Q ss_pred             HHHHHHhcCC---CCCCcEEEEeCCc
Q psy4233         221 AAIVAACKDP---DAAGKIYQAVGPK  243 (303)
Q Consensus       221 ~~~~~~~~~~---~~~g~~~~i~~~~  243 (303)
                      ++++.++..+   ...|+.|++.++.
T Consensus       230 ~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          230 PAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999753   3368899998775

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.91  E-value=4.4e-24  Score=179.29  Aligned_cols=216  Identities=14%  Similarity=0.063  Sum_probs=158.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      |++++++++||||+|+||++++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++      
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3567889999999999999999999999999999999754322211111 112468999999999999888765      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||+||....        +.....+++|+.++.++++++..    .+..++|++||...+..     ......|+
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  155 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-----NPGQTNYC  155 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----CTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----CCCcHHHH
Confidence             37999999996422        23456889999999999887643    45569999999877542     13457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH-HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY-YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      .+|...+.+.+..       ++++..++||.+.++....... ....   .....       .. ..+.+.+|+|++++.
T Consensus       156 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~-------~~-~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          156 AAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSF---IATKI-------PS-GQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHH---HHTTS-------TT-CCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHH---HhhcC-------CC-CCCcCHHHHHHHHHH
Confidence            9999888877653       6899999999999875432211 1111   11111       12 457999999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCccc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++..+  ...|+.+++.+|..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            99753  236999999888654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-23  Score=178.35  Aligned_cols=220  Identities=10%  Similarity=0.012  Sum_probs=155.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +.+++++++||||+|+||++++++|+++|++|++++|+.....+....   .....++.++.+|++|.+++.++++    
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            446788999999999999999999999999999999975332211111   1002468899999999999888776    


Q ss_pred             ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         ++|+|||+||....         +..+..+++|+.++..+.+++    ++.+..+||++||...+..     .....
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  163 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----IGNQS  163 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----CSSBH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----CCCCc
Confidence               58999999996422         233467889998887665554    4556679999999887642     13346


Q ss_pred             chhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh------hHHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         151 QFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL------RYYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      .|+.+|...+.+.+.       .+++++.++||.+++|.....      ..............|       . ..+.+.+
T Consensus       164 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~~~  235 (267)
T 1iy8_A          164 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP-------S-KRYGEAP  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT-------T-CSCBCHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC-------C-CCCcCHH
Confidence            899999999988765       379999999999987632110      000000000001111       1 3478999


Q ss_pred             HHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         218 DVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       218 Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      |+|+++++++..+  ...|+.+++.+|..++
T Consensus       236 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          236 EIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            9999999999753  3478899998886544

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.91  E-value=1.6e-23  Score=178.07  Aligned_cols=214  Identities=14%  Similarity=0.118  Sum_probs=159.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|+++.|+.....+....  .....++.++.+|++|.+++.++++      
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999998865433322211  1112468999999999999888775      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....        +..+..+++|+.++.++++++    ++.+..+||++||...+..     ......|+
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  179 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-----NPGQANYS  179 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-----CTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----CCCchhHH
Confidence             58999999997422        234568899999999999887    3345569999999876532     13346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+.++.......  ..   .....|+        ..+.+.+|+|++++++
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~---~~~~~p~--------~r~~~~~dvA~~v~~l  246 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA--EK---LLEVIPL--------GRYGEAAEVAGVVRFL  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH--HH---HGGGCTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH--HH---HHhcCCC--------CCCCCHHHHHHHHHHH
Confidence            9999888877653       7999999999999876542211  11   1122221        3478999999999999


Q ss_pred             hcCCC---CCCcEEEEeCCcccC
Q psy4233         227 CKDPD---AAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~~---~~g~~~~i~~~~~~s  246 (303)
                      +..+.   ..|+++++.+|..++
T Consensus       247 ~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          247 AADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHCGGGGGCCSCEEEESTTSCCC
T ss_pred             hCCcccCCCcCCEEEECCCeecC
Confidence            98632   369999998886553

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=1.8e-23  Score=178.76  Aligned_cols=215  Identities=13%  Similarity=0.125  Sum_probs=154.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+............ ...+++++.+|++|.+++.++++.      
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999997543221111110 014588999999999998887764      


Q ss_pred             -cCEEEEccccCcc------c----cchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          88 -SNVVINLIGREFA------T----KNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        88 -~D~vi~~a~~~~~------~----~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       +|+|||+||....      .    .....+++|+.+    ++++++.+++.+.++||++||...+...   +..+...|
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~~~Y  187 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---IPQLQAPY  187 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------CCHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---CCCCcccH
Confidence             8999999996432      1    123578899999    5677777777777899999998876421   12344689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      +.+|...|.+++..       + ++++++||.+.++..... ......+   ....+.        ..+++.+|+|++++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~p~--------~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKW---WQLTPL--------GREGLTQELVGGYL  255 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHH---HHHSTT--------CSCBCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHH---HHhCCc--------cCCcCHHHHHHHHH
Confidence            99999999988763       4 889999999988753211 1111111   111121        24789999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      .++..+  ...|+.+++.+|..
T Consensus       256 ~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHhCccccCccCCEEEECCCee
Confidence            999753  34688999988754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=181.09  Aligned_cols=232  Identities=13%  Similarity=0.064  Sum_probs=165.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCC---ceEEEecCCCCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLG---QVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~---~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....   ++.++.+|++|++++.++++   
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999754322211111 0112   68999999999999888775   


Q ss_pred             ----ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                          ++|+|||+||....          +.....+++|+.++.++++++..    .+ .+||++||...+....    ..
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~----~~  176 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH----SG  176 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC----TT
T ss_pred             HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC----CC
Confidence                58999999996322          12346889999999999888754    34 6999999988765320    23


Q ss_pred             CCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh---hH----HHHHHHhhhcceeeecCCCceeeCce
Q psy4233         149 GSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL---RY----YGHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                      ...|+.+|...+.+.+.       .++++++++||.+.+|.....   ..    ............|       . ..+.
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~  248 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-------V-GHCG  248 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-------T-SSCB
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC-------C-CCCc
Confidence            46799999999988765       379999999999998742211   00    0011110111111       1 3478


Q ss_pred             eHHHHHHHHHHHhcCC---CCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233         215 YVGDVAAAIVAACKDP---DAAGKIYQAVGPKRYLLSELLDWFHVVM  258 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~---~~~g~~~~i~~~~~~s~~e~~~~i~~~~  258 (303)
                      +.+|+|+++++++..+   ...|+.+++.+|..+.+.+.+..+.+.+
T Consensus       249 ~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~  295 (297)
T 1xhl_A          249 KPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL  295 (297)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred             CHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence            9999999999999743   3478999999998877777666555543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=1.3e-23  Score=177.42  Aligned_cols=220  Identities=15%  Similarity=0.099  Sum_probs=159.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            466889999999999999999999999999999999754332221111 122468999999999999888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH-----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS-----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++     ++.+..+||++||...+..     ......|+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  157 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-----GPGVIHSA  157 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----CTTCHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----CCCcHHHH
Confidence            58999999995321        234568999999999999988     3444569999999887653     13346899


Q ss_pred             HHHHHHHHHHHh--------hCCCEEEEeecceeeCCCchhhHHHH-HHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDKFLRYYGH-MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       154 ~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      .+|...+.+.+.        .++++..++||.+.++.......... ........+|       . ..+.+.+|+|++++
T Consensus       158 asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~pedvA~~v~  229 (257)
T 3imf_A          158 AAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP-------L-GRLGTPEEIAGLAY  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST-------T-CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHH
Confidence            999998877653        37999999999999875331111100 0000111122       1 34789999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCcccCH
Q psy4233         225 AACKDPD--AAGKIYQAVGPKRYLL  247 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~~~s~  247 (303)
                      +++..+.  ..|+.+++.+|..++.
T Consensus       230 ~L~s~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          230 YLCSDEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred             HHcCchhcCccCCEEEECCCcccCC
Confidence            9997533  3799999999876653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.4e-23  Score=173.78  Aligned_cols=213  Identities=11%  Similarity=0.038  Sum_probs=155.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~v   91 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+.... +...   ..++++++.+|++|++++.++++   ++|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-QELE---KYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-GGGG---GSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHH---hccCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            35678999999999999999999999999999999975332 2222   12368999999999999887653   58999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      ||+||....        +.....+++|+.++.++++++.    +.+..++|++||...+....    .+...|+.+|...
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~~Y~~sK~a~  154 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----VNRCVYSTTKAAV  154 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----TTBHHHHHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----CCCccHHHHHHHH
Confidence            999996422        2334678899999999998874    34667999999988764311    1346899999999


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeCCCch-hhH---HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGSGDKF-LRY---YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      +.+.+..       +++++++|||.+++|.... ...   ............+       . ..+.+.+|+|+++++++.
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dvA~~v~~l~s  226 (246)
T 2ag5_A          155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK-------T-GRFATAEEIAMLCVYLAS  226 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT-------T-SSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHhC
Confidence            9888763       7899999999999874221 000   0111110111111       1 247899999999999997


Q ss_pred             CC--CCCCcEEEEeCCc
Q psy4233         229 DP--DAAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~  243 (303)
                      .+  ...|+.+++.+|.
T Consensus       227 ~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          227 DESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             GGGTTCCSCEEEECTTG
T ss_pred             ccccCCCCCEEEECCCc
Confidence            53  2368899998875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=1.1e-23  Score=178.23  Aligned_cols=222  Identities=12%  Similarity=-0.001  Sum_probs=153.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC---CCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD---LGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+.....+.......   ..+++++.+|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999999999975332211111100   1268999999999999988876     


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..     ......|+
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  158 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----WQDLALSN  158 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTBHHHH
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----CCCCchhH
Confidence             59999999996321        234568889999996666655    4556789999999988753     13346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHH---HHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGH---MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .+|...+.+.+..       ++++++++||.+++|..........   ... .......+...... ..+.+.+|+|+++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~-~r~~~~~dva~~v  236 (260)
T 2z1n_A          159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGIT-VEEALKSMASRIPM-GRVGKPEELASVV  236 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCTT-SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCc-HHHHHHHHHhcCCC-CCccCHHHHHHHH
Confidence            9999999887653       7899999999999885431000000   000 00000000000111 2468999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++..+  ...|+.+++.+|.
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            9999753  3468899998774

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.91  E-value=3.2e-23  Score=174.19  Aligned_cols=214  Identities=16%  Similarity=0.090  Sum_probs=153.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~   90 (303)
                      ....+++|+||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++   ++|+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL--KDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--ccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            3456889999999999999999999999999999999754322221111  1468999999999999998887   4899


Q ss_pred             EEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      +||+||...        .+.....+++|+.++.++++++.    +.+..+||++||...+...     .....|+.+|..
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a  162 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----PGQANYCASKAG  162 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----SCSHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----CCCchhHHHHHH
Confidence            999999632        23456789999999999988773    3455699999998877531     345689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      .+.+.+..       ++++..++||.+.++.......  ..........+       . ..+.+.+|+|++++.++..+.
T Consensus       163 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~s~~~  232 (249)
T 3f9i_A          163 LIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--KQREAIVQKIP-------L-GTYGIPEDVAYAVAFLASNNA  232 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--HHHHHHHHHCT-------T-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--HHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcCCcc
Confidence            99877653       6899999999999875332111  11110111122       1 457899999999999997543


Q ss_pred             --CCCcEEEEeCCcc
Q psy4233         232 --AAGKIYQAVGPKR  244 (303)
Q Consensus       232 --~~g~~~~i~~~~~  244 (303)
                        ..|+.+++.+|..
T Consensus       233 ~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          233 SYITGQTLHVNGGML  247 (249)
T ss_dssp             TTCCSCEEEESTTSS
T ss_pred             CCccCcEEEECCCEe
Confidence              3689999988764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=1.2e-23  Score=177.65  Aligned_cols=214  Identities=16%  Similarity=0.097  Sum_probs=154.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------c
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------Y   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~   87 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+..+..+..     ..+++++.+|++|.+++.++++      +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----GDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----CTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4567889999999999999999999999999999999644322221     2468999999999999888776      6


Q ss_pred             cCEEEEccccC------------ccccchhhhhhhcchHHHHHHHHHhc------------CCceEEEEecCccCCCCCC
Q psy4233          88 SNVVINLIGRE------------FATKNFTIADANVEIPARLARLSKEM------------GVEKFIHISALNADPNPPT  143 (303)
Q Consensus        88 ~D~vi~~a~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~------------~~~~~v~~Ss~~~~~~~~~  143 (303)
                      +|++||+||..            ..+..+..+++|+.++.++++++...            +..+||++||...+..   
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  156 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG---  156 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC---
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC---
Confidence            99999999963            22344678999999999999988642            2348999999987752   


Q ss_pred             CCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         144 YYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       144 ~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                        ......|+.+|...+.+.+..       ++++..++||.+..+.......  ..........+..       ..+.+.
T Consensus       157 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-------~r~~~p  225 (257)
T 3tl3_A          157 --QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE--EARASLGKQVPHP-------SRLGNP  225 (257)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH--HHHHHHHHTSSSS-------CSCBCH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH--HHHHHHHhcCCCC-------CCccCH
Confidence              123457999999998877653       6899999999998875432111  1111111222221       247899


Q ss_pred             HHHHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         217 GDVAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      +|+|++++++++.+...|+.+++.+|..++
T Consensus       226 ~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          226 DEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            999999999998766689999999887654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=3.5e-23  Score=173.99  Aligned_cols=212  Identities=13%  Similarity=0.052  Sum_probs=150.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC-CcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN-FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+. ....+.+...  ..+++++.+|++|++++.++++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999999986 3222222111  2468999999999998887753       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +.....+++|+.++.+++++    +++.+..+||++||...+..     ......|+.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  156 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----IEAYTHYIS  156 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----CSSCHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----CCCchhHHH
Confidence            68999999996322        23346889999998888877    55566779999999988753     134568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+..       +++++.++||.+.++... ... ......    ....     ... ..+.+.+|+|+++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~~-----~~~-~~~~~p~dva~~~~~  226 (249)
T 2ew8_A          157 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVL----PNML-----QAI-PRLQVPLDLTGAAAF  226 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT-----SSS-CSCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHH----HHhh-----Ccc-CCCCCHHHHHHHHHH
Confidence            999999888763       789999999999987432 110 000000    0000     011 347899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCc
Q psy4233         226 ACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++..+  ...|+.+++.+|.
T Consensus       227 l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          227 LASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HTSGGGTTCCSCEEEESSSC
T ss_pred             HcCcccCCCCCcEEEECCCc
Confidence            99743  3468899998774

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=5.7e-23  Score=175.26  Aligned_cols=216  Identities=12%  Similarity=0.078  Sum_probs=155.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||++++++|+++|++|++++|+.....+.........++.++.+|++|++++.++++       
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3456789999999999999999999999999999999754322211111112368899999999998888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCC----ceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGV----EKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                      ++|+|||+||....        +.....+++|+.++.++++++.    +.+.    .+||++||...+...     ....
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~-----~~~~  179 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM-----GEQA  179 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-----CCSC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-----CCCc
Confidence            58999999996321        2335688999999988877663    3343    799999999887531     2234


Q ss_pred             -chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         151 -QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       151 -~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                       .|+.+|...+.+.+..       ++++++++||.+.++..... ......+. .....|.        ..+.+.+|+|+
T Consensus       180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~--------~r~~~p~dvA~  250 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEA-DSASIPM--------GRWGRPEEMAA  250 (276)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHH-HHHTSTT--------SSCCCHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHH-hhcCCCC--------CCcCCHHHHHH
Confidence             8999999999887653       78999999999988753311 00001110 0001221        24789999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++++..+  ...|+.+++.+|.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            999999753  3468899998774

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=181.74  Aligned_cols=219  Identities=14%  Similarity=0.108  Sum_probs=156.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc------CCCCceEEEecCCCCHHHHHHHhcc-
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC------GDLGQVLFQPYHPRNDDEIRKAIKY-   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~-   87 (303)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.....+.....      ....+++++.+|++|.+++.++++. 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999753322111110      0124689999999999998887763 


Q ss_pred             ------cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          88 ------SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        88 ------~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                            +|+|||+||....        ......+++|+.++.++++++..    .+..++|++||....+.      ...
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------~~~  168 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------PLA  168 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC------TTC
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC------Ccc
Confidence                  8999999995321        22346789999999999998755    23468999999883321      234


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCC--CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSG--DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ..|+.+|...+.+.+..       +++++++|||++++|.  ..................+       . ..+.+.+|+|
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~dvA  240 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP-------A-KRIGVPEEVS  240 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST-------T-SSCBCTHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc-------c-cCCCCHHHHH
Confidence            67999999998877653       7899999999999983  2211111111110111111       1 2478999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcccCH
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~~s~  247 (303)
                      ++++.++...  ...|+.+++.+|..++.
T Consensus       241 ~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          241 SVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            9999999753  24688999999876543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.91  E-value=1.3e-23  Score=179.39  Aligned_cols=218  Identities=13%  Similarity=0.086  Sum_probs=158.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4567889999999999999999999999999999999754322222221  2468999999999999888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  175 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----IADRTAYVA  175 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----CCCChhHHH
Confidence            58999999996322        2334678899999998888773    345569999999988753     234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCC-Cchhh---HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSG-DKFLR---YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +|...+.+.+..       ++++..++||.+.+|. .....   ........       +...... ..+.+.+|+|+++
T Consensus       176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~r~~~pedvA~~v  247 (277)
T 4dqx_A          176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSD-------FNARAVM-DRMGTAEEIAEAM  247 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHH-------HHTTSTT-CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHH-------HHhcCcc-cCCcCHHHHHHHH
Confidence            999999887653       6899999999998653 11000   00000000       1111112 3578999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         224 VAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ++++....  ..|+.+++.+|..++
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          248 LFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHhCCccCCCcCCEEEECCchhhh
Confidence            99997533  379999999887654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.91  E-value=2.3e-23  Score=175.57  Aligned_cols=212  Identities=11%  Similarity=0.042  Sum_probs=152.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|++++.++++       ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999753322211111  1358899999999999888776       68


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHH----HHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLA----RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.....+++|+.++..+.    ..+++.+..+||++||...+..     ......|+.+|
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK  155 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----LALTSSYGASK  155 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----CCCchhHHHHH
Confidence            999999996322        234568899999987544    4455666789999999987652     13456899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCce-eHHHHHHHHHHHhc
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPV-YVGDVAAAIVAACK  228 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~Dva~~~~~~~~  228 (303)
                      ...+.+.+..       ++++++++||.+++|....      ........   +...... ..+. +.+|+|+++++++.
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~~~~~---~~~~~p~-~~~~~~~~dvA~~v~~l~s  225 (254)
T 1hdc_A          156 WGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE------TGIRQGEG---NYPNTPM-GRVGNEPGEIAGAVVKLLS  225 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH------HTCCCSTT---SCTTSTT-SSCB-CHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc------cchhHHHH---HHhcCCC-CCCCCCHHHHHHHHHHHhC
Confidence            9999887653       6899999999998763211      00000000   0000111 2367 99999999999997


Q ss_pred             CC--CCCCcEEEEeCCcc
Q psy4233         229 DP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~  244 (303)
                      .+  ...|+.+++.+|..
T Consensus       226 ~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          226 DTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             chhcCCCCCEEEECCCcc
Confidence            53  34688999988754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=1.1e-22  Score=173.92  Aligned_cols=222  Identities=16%  Similarity=0.077  Sum_probs=158.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC------------cccccch--hcCCCCceEEEecCCCCHH
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF------------YDVRDLR--LCGDLGQVLFQPYHPRNDD   79 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~------------~~~~~~~--~~~~~~~~~~~~~Dl~d~~   79 (303)
                      .++++++++||||+|+||.+++++|+++|++|++++|+..            +..+...  ......++.++.+|++|.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            3467889999999999999999999999999999998421            1111111  1112256899999999999


Q ss_pred             HHHHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCC
Q psy4233          80 EIRKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADP  139 (303)
Q Consensus        80 ~~~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~  139 (303)
                      ++.++++       ++|++||+||....        +..+..+++|+.++.++++++.    +.+ ..+||++||...+.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            9888765       58999999996432        2334678899999999999873    333 45899999988875


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCcee
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETI  210 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  210 (303)
                      .     ......|+.+|...+.+.+..       ++++..++||.+++|..........+...  .....+..  .... 
T Consensus       171 ~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-  242 (280)
T 3pgx_A          171 A-----TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM--PVQP-  242 (280)
T ss_dssp             C-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCB--TTBC-
T ss_pred             C-----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhc--ccCC-
Confidence            3     133468999999999877653       68999999999999865432211111110  11111111  1112 


Q ss_pred             eCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         211 KQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      ..+.+.+|+|+++++++..+.  ..|+.+++.+|.
T Consensus       243 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          243 NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            238999999999999997533  468999998775

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.91  E-value=6.2e-23  Score=175.92  Aligned_cols=215  Identities=14%  Similarity=0.123  Sum_probs=155.1

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+  |+||.+++++|+++|++|++++|+.. ..+... +....+++.++.+|++|.+++.++++      
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            566899999999  99999999999999999999999753 111111 11111347889999999999888775      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcC---CceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMG---VEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                       ++|+|||+||....            +.....+++|+.++.++++++...-   ..+||++||...+..     .....
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  172 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-----VPHYN  172 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----CTTTT
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----CCCcc
Confidence             58999999996421            2234688999999999999987642   269999999877642     13446


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       ++++++++||.+++|...................|+        ..+.+.+|+|+++
T Consensus       173 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~dva~~~  244 (285)
T 2p91_A          173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF--------GKPITIEDVGDTA  244 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT--------SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC--------CCCcCHHHHHHHH
Confidence            8999999999887653       799999999999998543211111111111111221        2368999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCcc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +.++...  ...|+.|++.++..
T Consensus       245 ~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          245 VFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHcCCcccCCCCCEEEECCCcc
Confidence            9999643  23688999988754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=5e-23  Score=174.54  Aligned_cols=207  Identities=14%  Similarity=0.024  Sum_probs=153.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++++++||||+|+||++++++|+++|++|++++|+...          ..++.++.+|++|.+++.++++       +
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   74 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGS   74 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999997543          1358899999999999888776       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++.++++++..    .+..+||++||...+..     ..+...|+.+
T Consensus        75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s  149 (264)
T 2dtx_A           75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----TKNASAYVTS  149 (264)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----CTTBHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----CCCchhHHHH
Confidence            8999999996322        23457889999998888887753    35579999999988753     1344689999


Q ss_pred             HHHHHHHHHhh----C--CCEEEEeecceeeCCCchhhH-----HH----HHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         156 KYQGEKEVLRE----F--PEATIFRPSDMYGSGDKFLRY-----YG----HMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       156 K~~~e~~~~~~----~--~~~~ilrp~~~~G~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      |...+.+.+..    +  +++++++||.+.++.......     ..    ..........|       . ..+++.+|+|
T Consensus       150 K~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~p~dvA  221 (264)
T 2dtx_A          150 KHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP-------M-QRIGKPQEVA  221 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST-------T-SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC-------C-CCCcCHHHHH
Confidence            99999888764    2  788999999997653211100     00    00000111111       1 3579999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++++.++..+  ...|+.+++.++..
T Consensus       222 ~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          222 SAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCchhcCCCCcEEEECCCcc
Confidence            9999999753  34688999988754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.91  E-value=2.1e-23  Score=178.10  Aligned_cols=216  Identities=15%  Similarity=0.125  Sum_probs=155.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.++++       
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999999999754322111111 112458899999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc------CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM------GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      ++|+|||+||....        +.....+++|+.++.++++++...      +..+||++||...+..     ......|
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y  173 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----VVHAAPY  173 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----CTTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----CCCCccH
Confidence            58999999996322        223568899999999999987654      5579999999877542     1334689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh-HH--------HHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YY--------GHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      +.+|...+.+.+..       ++++++++||.++++...... ..        ...........|       . ..+++.
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~~  245 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP-------I-GRYVQP  245 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHST-------T-SSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCC-------C-CCCcCH
Confidence            99999999887763       689999999999876322110 00        000000111111       1 357999


Q ss_pred             HHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         217 GDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       217 ~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +|+|++++.++..+  ...|+.+++.+|.
T Consensus       246 ~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          246 SEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            99999999999754  2468899998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.91  E-value=9.4e-24  Score=179.61  Aligned_cols=220  Identities=15%  Similarity=0.104  Sum_probs=160.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++      
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3456789999999999999999999999999999998754322221111 112468999999999999888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....        +.++..+++|+.++.++++++..    .+..+||++||...+..     ......|+
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----~~~~~~Y~  176 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----RATVAPYT  176 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----CTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----CCCchhHH
Confidence             58999999996322        23456899999999999877643    35569999999877642     23457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+.++...................|.        ..+.+.+|+|++++++
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA--------KRWGKPQELVGTAVFL  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT--------CSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999887763       689999999999977433211101111111112221        3468899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCcccC
Q psy4233         227 CKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +...  ...|+.+++.+|...+
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCccccCCCCcEEEECCCeecc
Confidence            8753  3479999999887544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.91  E-value=2.5e-23  Score=176.96  Aligned_cols=226  Identities=14%  Similarity=0.123  Sum_probs=161.6

Q ss_pred             ccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ....+++|+||||+  |+||.+++++|+++|++|++++|+..............+++.++.+|++|.+++.++++     
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            34568899999999  99999999999999999999999743221111111222458899999999999888776     


Q ss_pred             --ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 --~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                        ++|++||+||....             ......+++|+.++.++++++...-  ..++|++||...+..     ....
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~  164 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----IPNY  164 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTT
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----CCCc
Confidence              47999999996421             2234688999999999999987642  248999999887652     2345


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+..+...................+.        ..+.+.+|+|++
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--------~~~~~pedva~~  236 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL--------KRNVTIEQVGNA  236 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT--------SSCCCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc--------CCCCCHHHHHHH
Confidence            78999999999887663       699999999999987543222222222211122221        346899999999


Q ss_pred             HHHHhcC--CCCCCcEEEEeCCcccCHHHHHH
Q psy4233         223 IVAACKD--PDAAGKIYQAVGPKRYLLSELLD  252 (303)
Q Consensus       223 ~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~  252 (303)
                      +++++..  ....|+.+++.+|..++..++++
T Consensus       237 i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          237 GAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            9999975  33479999999998887766543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.91  E-value=1.3e-22  Score=174.87  Aligned_cols=220  Identities=11%  Similarity=0.080  Sum_probs=161.3

Q ss_pred             ccCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +.+++++++||||+|  +||.+++++|+++|++|++++|+..............+++.++.+|++|.+++.++++     
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345678999999998  9999999999999999999999743221111111112347899999999999888775     


Q ss_pred             --ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 --~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                        ++|++||+||....            +.....+++|+.++.++++++...-  ..+||++||...+..     .....
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-----~~~~~  180 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-----VPHYN  180 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----CTTTT
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----CCCch
Confidence              47999999996421            2345788999999999999987643  249999999887652     23457


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       ++++..++||.+..+...................|+        ..+...+|+|+++
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v  252 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL--------RRNTTLDDVGGAA  252 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT--------SSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC--------CCCCCHHHHHHHH
Confidence            8999999999987763       689999999999988544322222221111222221        2468899999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ++++...  ...|+++++.+|..+.
T Consensus       253 ~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHcCCccCCccCCEEEECCCcccc
Confidence            9999753  3479999999987654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.90  E-value=3e-23  Score=175.50  Aligned_cols=221  Identities=14%  Similarity=0.072  Sum_probs=152.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchhcCC--CCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRLCGD--LGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+... ..+.......  ..++.++.+|++|++++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999997543 2111111100  1358899999999999888775      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....        +..+..+++|+.++.++++++.    +.+..+||++||...+...     .+...|+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~  156 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----ANKSAYV  156 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----CCCchHH
Confidence             58999999996321        2335688999999999888774    3456799999999886521     3456899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh----hhcceeee-cCCCceeeCceeHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH----VFRKLAVY-KKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~i~~~Dva~  221 (303)
                      .+|...+.+.+..       +++++.++||.+.+|.....  .......    .......+ ...... ..+.+.+|+|+
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dva~  233 (260)
T 1x1t_A          157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ--ISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCTT-CCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh--hhhhccccCCchHHHHHHHhhccCCC-CCCcCHHHHHH
Confidence            9999999887653       68999999999998753211  0000000    00000000 000011 35789999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++++++..+  ...|+.+++.+|..
T Consensus       234 ~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          234 TAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhChhhcCCCCCEEEECCCcc
Confidence            999999753  24688999988753

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.90  E-value=1.4e-23  Score=178.13  Aligned_cols=215  Identities=13%  Similarity=0.053  Sum_probs=151.4

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++.+++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++      
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--GKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            34456889999999999999999999999999999998754322222221  2468999999999999888775      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....        +.+...+++|+.++.++.+++    ++.+..+||++||...+...     .....|+
T Consensus       100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~  174 (266)
T 3grp_A          100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----PGQTNYC  174 (266)
T ss_dssp             TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------CHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----CCchhHH
Confidence             58999999996422        234568889999976666655    44566799999998776421     2346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+.++......  ...........|       . ..+.+.+|+|++++++
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p-------~-~r~~~~edvA~~v~~L  244 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN--EKQKEAIMAMIP-------M-KRMGIGEEIAFATVYL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC--HHHHHHHHTTCT-------T-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC--HHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence            9999988877653       689999999999876321110  011111111222       1 3578899999999999


Q ss_pred             hcCCC--CCCcEEEEeCCcc
Q psy4233         227 CKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~~  244 (303)
                      +..+.  ..|+.+++.+|..
T Consensus       245 ~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          245 ASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTC-
T ss_pred             hCccccCccCCEEEECCCee
Confidence            97532  3799999988753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.90  E-value=4.6e-23  Score=177.27  Aligned_cols=217  Identities=14%  Similarity=0.026  Sum_probs=157.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~   90 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..+++++.+|++|.+++.++++   ++|+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            4466889999999999999999999999999999999754332222221  2569999999999999999887   4799


Q ss_pred             EEEccccCc------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC--------CCCCCCCCchhHHH
Q psy4233          91 VINLIGREF------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP--------TYYISGGSQFYRTK  156 (303)
Q Consensus        91 vi~~a~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~--------~~~~~~~~~y~~~K  156 (303)
                      +||+||...      .+..+..+++|+.++.++++++.....++||++||...+....        ..+..+...|+.+|
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  169 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK  169 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHH
Confidence            999999632      3455678999999999999999988778999999988764321        12233445799999


Q ss_pred             HHHHHHHHhh-------C--CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         157 YQGEKEVLRE-------F--PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       157 ~~~e~~~~~~-------~--~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      ...+.+.+..       +  ++++.++||.+..+.......  .... .....+      .. +-..+.+|+|++++.++
T Consensus       170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~--~~~~-~~~~~~------~~-~~~~~~~~~A~~~~~l~  239 (291)
T 3rd5_A          170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR--KLGD-ALMSAA------TR-VVATDADFGARQTLYAA  239 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch--HHHH-HHHHHH------HH-HHhCCHHHHHHHHHHHH
Confidence            9999877653       4  889999999998764332110  0000 000111      11 22356999999999999


Q ss_pred             cCCCCCCcEEEEeCC
Q psy4233         228 KDPDAAGKIYQAVGP  242 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~  242 (303)
                      ..+...|+.+.+.+|
T Consensus       240 ~~~~~~G~~~~vdgG  254 (291)
T 3rd5_A          240 SQDLPGDSFVGPRFG  254 (291)
T ss_dssp             HSCCCTTCEEEETTS
T ss_pred             cCCCCCCceeCCccc
Confidence            876667888887654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.90  E-value=3.6e-23  Score=176.53  Aligned_cols=213  Identities=14%  Similarity=0.105  Sum_probs=153.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec-CCCcccccchhcC-C-CCceEEEecCCCCH----HHHHHHhc--
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR-GNFYDVRDLRLCG-D-LGQVLFQPYHPRND----DEIRKAIK--   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~----~~~~~~~~--   86 (303)
                      |++++++||||+|+||.+++++|+++|++|++++| +.....+...... . ..++.++.+|++|.    +++.++++  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            56789999999999999999999999999999999 5322111111110 0 14689999999999    88887765  


Q ss_pred             -----ccCEEEEccccCcc-------------------ccchhhhhhhcchHHHHHHHHHhc---CC------ceEEEEe
Q psy4233          87 -----YSNVVINLIGREFA-------------------TKNFTIADANVEIPARLARLSKEM---GV------EKFIHIS  133 (303)
Q Consensus        87 -----~~D~vi~~a~~~~~-------------------~~~~~~~~~n~~~~~~l~~~~~~~---~~------~~~v~~S  133 (303)
                           ++|+|||+||....                   ......+++|+.++.++++++...   +.      .+||++|
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence                 58999999996321                   233468899999999999998763   33      6999999


Q ss_pred             cCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCC
Q psy4233         134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKG  206 (303)
Q Consensus       134 s~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (303)
                      |...+..     ......|+.+|...+.+.+..       +++++.++||.+++| ..........   .....|.    
T Consensus       169 S~~~~~~-----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~---~~~~~p~----  235 (276)
T 1mxh_A          169 DAMTDLP-----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEE---YRRKVPL----  235 (276)
T ss_dssp             CGGGGSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHH---HHTTCTT----
T ss_pred             chhhcCC-----CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHH---HHhcCCC----
Confidence            9988752     234468999999999887653       789999999999998 3221111111   1111221    


Q ss_pred             CceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         207 EETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       207 ~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                        . +++.+.+|+|++++.++..+.  ..|+.+++.+|..
T Consensus       236 --~-r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 --G-QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             --T-SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --C-CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence              1 237899999999999997532  3688999988754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.90  E-value=5e-23  Score=173.64  Aligned_cols=220  Identities=13%  Similarity=-0.034  Sum_probs=161.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       ++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            56789999999999999999999999999999999754322221111  1468999999999998887654       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++||+||....        +..+..+++|+.++.++++++...-  -.+||++||...+..     ......|+.+|..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa  158 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----HPGMSVYSASKAA  158 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----CTTBHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----CCCchHHHHHHHH
Confidence            999999996422        2345689999999999999997531  248999999988753     2345689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCch---hh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKF---LR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+.+.+..       ++++..++||.+.+|....   .. ....+........|.        ..+.+.+|+|+++++++
T Consensus       159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v~~L~  230 (255)
T 4eso_A          159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM--------KRNGTADEVARAVLFLA  230 (255)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT--------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC--------CCCcCHHHHHHHHHHHc
Confidence            99887653       7999999999999875321   11 111111111112221        34689999999999998


Q ss_pred             cC-CCCCCcEEEEeCCcccCHHHH
Q psy4233         228 KD-PDAAGKIYQAVGPKRYLLSEL  250 (303)
Q Consensus       228 ~~-~~~~g~~~~i~~~~~~s~~e~  250 (303)
                      .. ....|+.+++.+|...++.++
T Consensus       231 s~~~~itG~~i~vdGG~~~~l~~~  254 (255)
T 4eso_A          231 FEATFTTGAKLAVDGGLGQKLSTA  254 (255)
T ss_dssp             HTCTTCCSCEEEESTTTTTTBCC-
T ss_pred             CcCcCccCCEEEECCCccccCcCc
Confidence            74 233799999999987766543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.90  E-value=3.7e-23  Score=177.30  Aligned_cols=215  Identities=13%  Similarity=0.042  Sum_probs=152.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.+++++|+||||+|+||++++++|+++|++|+++.|+.....+..... ....++.++.+|++|.+++.++++      
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4456789999999999999999999999999999887643322111111 112468899999999999888774      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|+|||+||....        +.....+++|+.++.++++++.    +.+..+||++||...+...     .....|+
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~Y~  194 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----VGQANYS  194 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TTCHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----CCCchHH
Confidence             58999999996422        2335688999999888777764    4566799999998765321     2346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++++++||.+.++......  ...........+.        ..+++.+|+|++++.+
T Consensus       195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~dvA~~~~~l  264 (285)
T 2c07_A          195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS--EQIKKNIISNIPA--------GRMGTPEEVANLACFL  264 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC--HHHHHHHHTTCTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC--HHHHHHHHhhCCC--------CCCCCHHHHHHHHHHH
Confidence            9999998877653       789999999999987432111  1111101111221        2479999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCc
Q psy4233         227 CKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~  243 (303)
                      +..+.  ..|+.+++.+|.
T Consensus       265 ~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          265 SSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCCCcCCCCCCEEEeCCCc
Confidence            97532  368899998774

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.90  E-value=3.7e-23  Score=173.76  Aligned_cols=214  Identities=14%  Similarity=0.095  Sum_probs=157.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+......  .+...+.+|++|++++.++++       
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--DNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            44567899999999999999999999999999999997543222211111  347889999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +.+...+++|+.++.++++++..    .+..+||++||...+..     ..+...|+.
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  157 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-----NAGQANYAA  157 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----CTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----CCCChHHHH
Confidence            68999999996422        23456889999999999998743    45569999999876532     134578999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+..+.......  ..........|       . ..+.+.+|+|+++++++
T Consensus       158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~p-------~-~r~~~p~dva~~v~~L~  227 (248)
T 3op4_A          158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND--EQRTATLAQVP-------A-GRLGDPREIASAVAFLA  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH--HHHHHHHHTCT-------T-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH--HHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHc
Confidence            999988877653       6899999999998875432111  11110111222       1 35789999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcc
Q psy4233         228 KDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~  244 (303)
                      ..+.  ..|+.+++.+|..
T Consensus       228 s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          228 SPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             SGGGTTCCSCEEEESTTSS
T ss_pred             CCccCCccCcEEEECCCee
Confidence            7532  3699999988753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.90  E-value=3.3e-23  Score=175.31  Aligned_cols=221  Identities=14%  Similarity=0.058  Sum_probs=150.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--GDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5567889999999999999999999999999999999754332222221  2468999999999999888776       


Q ss_pred             ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc----C----CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM----G----VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~----~----~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                      ++|++||+||....         +.....+++|+.++.++++++...    +    ..++|++||...+..     ....
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~  157 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----RPNL  157 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----CTTC
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----CCCc
Confidence            57999999996431         233467889999999888877432    1    337999999887652     2334


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+.++.....  ....   .......+...... ..+++.+|+|++
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~  231 (261)
T 3n74_A          158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF--MGED---SEEIRKKFRDSIPM-GRLLKPDDLAEA  231 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CTT-SSCCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh--cccC---cHHHHHHHhhcCCc-CCCcCHHHHHHH
Confidence            57999999999987663       68999999999988743211  0000   00001111111122 357999999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcccCH
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~~s~  247 (303)
                      ++.++..+  ...|+.+++.+|..++-
T Consensus       232 ~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          232 AAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHcCCcccCcCCcEEEecCCcccCC
Confidence            99999643  34799999999877654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=5.6e-23  Score=175.74  Aligned_cols=217  Identities=12%  Similarity=0.058  Sum_probs=156.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCC---ceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLG---QVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~---~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....   ++.++.+|++|++++.++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999754322211111 1112   68999999999998887765     


Q ss_pred             --ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 --~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                        ++|+|||+||....            +.....+++|+.++.++++++..    .+ .+||++||...+....    ..
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----~~  158 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----PD  158 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC----CS
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC----Cc
Confidence              58999999996422            12346789999999999988754    34 6999999998875320    23


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh---hH----HHHHHHhhhcceeeecCCCceeeCce
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL---RY----YGHMWRHVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (303)
                      ...|+.+|...+.+.+..       +++++.++||.+++|.....   ..    ............|       . ..+.
T Consensus       159 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~  230 (280)
T 1xkq_A          159 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP-------I-GAAG  230 (280)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-------T-SSCB
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCC-------C-CCCC
Confidence            467999999999887653       79999999999998742211   00    0111111111111       1 3478


Q ss_pred             eHHHHHHHHHHHhcCC---CCCCcEEEEeCCccc
Q psy4233         215 YVGDVAAAIVAACKDP---DAAGKIYQAVGPKRY  245 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~---~~~g~~~~i~~~~~~  245 (303)
                      +.+|+|+++++++..+   ...|+.+++.+|..+
T Consensus       231 ~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          231 KPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            9999999999998643   346889999888654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=9.5e-23  Score=171.10  Aligned_cols=203  Identities=16%  Similarity=0.045  Sum_probs=144.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      |++++|+||||+|+||++++++|+++|  ++|++++|+.... +.+... ...+++++.+|++|.+++.++++       
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-TELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-HHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH-HHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            456899999999999999999999999  9999999975433 222221 13568999999999999888776       


Q ss_pred             --ccCEEEEccccCc-c--------ccchhhhhhhcchHHHHHHHHHhc----------C-----CceEEEEecCccCCC
Q psy4233          87 --YSNVVINLIGREF-A--------TKNFTIADANVEIPARLARLSKEM----------G-----VEKFIHISALNADPN  140 (303)
Q Consensus        87 --~~D~vi~~a~~~~-~--------~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~Ss~~~~~~  140 (303)
                        ++|+|||+||... .        ......+++|+.++.++++++...          +     ..+||++||...+..
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              7999999998644 1        223467889999999998887543          4     579999999877653


Q ss_pred             CC--CCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceee
Q psy4233         141 PP--TYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIK  211 (303)
Q Consensus       141 ~~--~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (303)
                      ..  ..+..+...|+.+|...+.+++..       ++++++++||.+.++....                         .
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~  213 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------N  213 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------C
Confidence            21  111134568999999999887653       6899999999987663210                         1


Q ss_pred             CceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         212 QPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       212 ~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      .+++.+|+|++++.++..+.  ..|+.+.+ +++.++
T Consensus       214 ~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~-~g~~~~  249 (250)
T 1yo6_A          214 AALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE  249 (250)
T ss_dssp             -----HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred             CCCCHHHHHHHHHHHHhcccccCCCeEEEE-CCcCCC
Confidence            35889999999999998654  25654444 444343

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.90  E-value=2.5e-23  Score=176.53  Aligned_cols=215  Identities=17%  Similarity=0.110  Sum_probs=153.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+......          ...+.+|++|.+++.++++       
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~----------~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA----------DLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC----------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh----------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            34567899999999999999999999999999999997543211          2345899999988776654       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++    ++.+..+||++||...+..     ......|+.
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  168 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----GPGHALYCL  168 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----CTTBHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----CCCChHHHH
Confidence            58999999997432        233467889999999999988    5556679999999887642     234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..++||.+.+|....  ...............+...... ..+.+.+|+|++++.++
T Consensus       169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          169 TKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT--GFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH--HHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh--hhhcccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            999999887653       6899999999998763211  0000000000000001111112 45789999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcccC
Q psy4233         228 KDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ..+.  ..|+.+++.+|..++
T Consensus       246 s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          246 SDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             SGGGTTCCSCEEEESTTCCCC
T ss_pred             CchhcCCcCCEEEECcCEeCC
Confidence            7542  369999999887654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.90  E-value=8.7e-24  Score=177.09  Aligned_cols=211  Identities=11%  Similarity=0.028  Sum_probs=147.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEE-EecCCCCHHHHHHHhc-------c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLF-QPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~-~~~Dl~d~~~~~~~~~-------~   87 (303)
                      |++|+||||+|+||++++++|+++|++|+++ .|+.....+.... .....++.. +.+|++|.+++.++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999998 6754322111111 111134666 9999999998887754       6


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHH----HHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLA----RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++.+++    +.+++.+.++||++||...+...     .+...|+.+
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~s  155 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----PGQANYVAS  155 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----SSBHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----CCCcchHHH
Confidence            8999999996422        233467889999955544    45556677899999998654321     234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       +++++++|||.+++|......  ...........+       . ..+++++|+|++++.++.
T Consensus       156 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~  225 (245)
T 2ph3_A          156 KAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP--QEVKEAYLKQIP-------A-GRFGRPEEVAEAVAFLVS  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHHHHHHHHTCT-------T-CSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC--HHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHhC
Confidence            99988877653       789999999999976422110  111110111111       1 357899999999999997


Q ss_pred             CCC--CCCcEEEEeCCc
Q psy4233         229 DPD--AAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~~--~~g~~~~i~~~~  243 (303)
                      .+.  ..|+.|++.++.
T Consensus       226 ~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          226 EKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             cccccccCCEEEECCCC
Confidence            532  358899998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.90  E-value=6.5e-23  Score=176.36  Aligned_cols=218  Identities=11%  Similarity=0.090  Sum_probs=156.2

Q ss_pred             cCCCcEEEEEcCCCh--hHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGY--MGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++||||+|+  ||.+++++|+++|++|+++.|+...............++.++.+|++|.+++.++++      
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            355779999999988  999999999999999999998732111111111112458899999999999888775      


Q ss_pred             -ccCEEEEccccCc------------cccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREF------------ATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+||...            .+.....+++|+.++.++++++...-  ..+||++||...+..     ......
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----~~~~~~  182 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-----MPNYNV  182 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----CTTTTH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----CCchHH
Confidence             5899999999643            12334688999999999999987642  349999999888752     234578


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..++||.+.++...................|+        ..+.+.+|+|++++
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v~  254 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--------RRTVTIDEVGDVGL  254 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT--------SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC--------CCCCCHHHHHHHHH
Confidence            999999999887763       689999999999987433211111111111122221        34688999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++...  ...|+.+++.+|..+
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHcCccccCCcceEEEECCCccc
Confidence            999753  347999999988654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.90  E-value=2.3e-23  Score=174.51  Aligned_cols=211  Identities=15%  Similarity=0.106  Sum_probs=150.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+||||+|+||++++++|+++|++|+++ .|+.....+.... .....++.++.+|++|++++.++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999995 6653322111111 0112468899999999999988876       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |+|||+||....        +.....+++|+.++.++++++..    .+..+||++||...+..     ..+...|+.+|
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK  155 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-----NIGQANYAAAK  155 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----CTTCHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC-----CCCCccchhhH
Confidence            999999996432        23346789999999999888765    36679999999866431     12346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       +++++++|||.++++......  ...........|       . ..+++.+|+|++++.++..
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~~  225 (244)
T 1edo_A          156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG--EDMEKKILGTIP-------L-GRTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--HHHHHHHHTSCT-------T-CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC--hHHHHHHhhcCC-------C-CCCCCHHHHHHHHHHHhCC
Confidence            9988877652       689999999999976322110  111110111122       1 3478999999999999843


Q ss_pred             CC---CCCcEEEEeCCc
Q psy4233         230 PD---AAGKIYQAVGPK  243 (303)
Q Consensus       230 ~~---~~g~~~~i~~~~  243 (303)
                      +.   ..|+.|++.++.
T Consensus       226 ~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          226 PAASYITGQAFTIDGGI  242 (244)
T ss_dssp             SGGGGCCSCEEEESTTT
T ss_pred             CccCCcCCCEEEeCCCc
Confidence            32   358899998774

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=8.4e-23  Score=173.42  Aligned_cols=218  Identities=14%  Similarity=0.081  Sum_probs=155.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .++++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ....++.++.+|++|++++.++++     
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4466889999999999999999999999999999999753322111110  011458889999999998887775     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCc-cCCCCCCCCCCCCCc
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALN-ADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~-~~~~~~~~~~~~~~~  151 (303)
                        ++|+|||+||....        +..+..+++|+.++.++++++    ++.+..+||++||.. ...     +......
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~~  171 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----TMPNISA  171 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----CSSSCHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----CCCCChh
Confidence              58999999996422        223467889999999998877    345567999999987 432     1134568


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++++++||.+.++.......-...........+.        ..+.+.+|+|++++
T Consensus       172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~p~dvA~~v~  243 (267)
T 1vl8_A          172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL--------GRTGVPEDLKGVAV  243 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT--------SSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC--------CCCcCHHHHHHHHH
Confidence            999999999887763       799999999999877533111000111101111221        24789999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++..+  ...|+.+.+.+|..
T Consensus       244 ~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          244 FLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHcCccccCCcCCeEEECCCCC
Confidence            999753  33688999988753

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=1.1e-22  Score=172.95  Aligned_cols=209  Identities=16%  Similarity=0.100  Sum_probs=154.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ...++++||||||+|+||.+++++|+++|++|++++|+.....         ..++.+.+|++|.+++.++++       
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3456889999999999999999999999999999999754321         247789999999999888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +.....+++|+.++.++++++..    .+..+||++||...+..     ......|+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  155 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-----TKNAAAYVT  155 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----CTTCHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----CCCChhHHH
Confidence            58999999996322        22346788999999998887643    45679999999988763     234568999


Q ss_pred             HHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhH---------HHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         155 TKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRY---------YGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       155 ~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      +|...+.+.+..      ++++..++||.+.++.......         ............|       . ..+.+.+|+
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~pedv  227 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP-------M-GRIGRPEEV  227 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST-------T-SSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC-------C-CCCcCHHHH
Confidence            999999988763      6788999999998763211000         0111111111122       1 357899999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      |+++++++...  ...|+++++.+|..
T Consensus       228 A~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          228 AEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            99999999753  34799999998864

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.90  E-value=1.7e-23  Score=177.56  Aligned_cols=219  Identities=14%  Similarity=0.050  Sum_probs=157.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+......  ...+++++.+|++|.+++.++++     
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34668899999999999999999999999999999997543222111110  12468999999999988887765     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        ++|++||+||....        +.....+++|+.++.++++++..    .+ ..+||++||...+..     ......
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~  170 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----LPDHYA  170 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTCHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----CCCChH
Confidence              68999999996432        23346889999999999888743    23 359999999988753     234568


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..++||.+..|.......-..........+|+        ..+.+.+|+|++++
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dva~~v~  242 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL--------GRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT--------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence            999999999877653       689999999999876321110000011101112221        34688999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++...  ...|+++++.+|..+
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            999753  347999999888654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.90  E-value=5.1e-23  Score=172.70  Aligned_cols=212  Identities=16%  Similarity=0.147  Sum_probs=152.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+..+..+... . .....++.++.+|++|++++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999994333222111 1 0112468899999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++.+++    ++.+..+||++||...+...     .....|+.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~a  156 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----PGQANYVA  156 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TTBHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----CCCchHHH
Confidence            68999999996322        233468899999977766655    44566799999998764321     23468999


Q ss_pred             HHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+.       .++++++++||.+.++..... ......   .....|.        ..+++.+|+|++++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~p~--------~~~~~~~dvA~~~~~l  225 (246)
T 2uvd_A          157 AKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAE---MLKLIPA--------AQFGEAQDIANAVTFF  225 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHH---HHHTCTT--------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHH---HHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            99999887654       378999999999987743211 111111   1111221        2478999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +..+  ...|+.+++.+|.
T Consensus       226 ~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          226 ASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             cCchhcCCCCCEEEECcCc
Confidence            9753  2368899998874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.90  E-value=1.6e-22  Score=172.86  Aligned_cols=216  Identities=13%  Similarity=0.142  Sum_probs=158.7

Q ss_pred             cCCCcEEEEEcCCCh--hHHHHHHHHHhCCCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGY--MGSYLCNKLGKQGSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+++++++||||+|+  ||.+++++|+++|++|++++|+.. +..+.+.  ...+++.++.+|++|.+++.++++     
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLC--AEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHH--GGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHH--HhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            356789999999977  999999999999999999999761 1111111  222458999999999999888765     


Q ss_pred             --ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 --~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                        ++|+|||+||....             ......+++|+.++.++++++...   ...++|++||...+..     ...
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~  175 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----MPS  175 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----CTT
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----CCC
Confidence              36999999996432             223457899999999999988653   2359999999888753     234


Q ss_pred             CCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ...|+.+|...+.+.+.       .++++..++||.+..+...................+.        ..+.+.+|+|+
T Consensus       176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~pedvA~  247 (280)
T 3nrc_A          176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL--------KKNVDIMEVGN  247 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT--------CSCCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC--------CCCCCHHHHHH
Confidence            56899999999988765       2699999999999987543222222222111112221        34688999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++.++..+  ...|+++++.+|..+
T Consensus       248 ~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          248 TVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCcccCCcCCcEEEECCCccc
Confidence            999999753  347999999988764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=1.3e-22  Score=170.10  Aligned_cols=211  Identities=9%  Similarity=-0.012  Sum_probs=153.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.... +.....  . +++++.+|++|++++.++++.       
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~--~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-REAAEA--V-GAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT--T-TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHH--c-CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999974322 211111  1 378899999999998887653       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +..+..+++|+.++.++++++..    .+..+||++||...++.      .....|+.+
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------~~~~~Y~as  151 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------LGQANYAAS  151 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------TTCHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC------CCchhHHHH
Confidence            8999999996322        23346788999999999887754    35679999999884432      234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++++++||.+..+.......  ..........|.        ..+.+.+|+|+++++++.
T Consensus       152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~--------~~~~~~~dvA~~v~~l~s  221 (245)
T 1uls_A          152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE--KVREKAIAATPL--------GRAGKPLEVAYAALFLLS  221 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH--HHHHHHHHTCTT--------CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH--HHHHHHHhhCCC--------CCCcCHHHHHHHHHHHhC
Confidence            99998877653       7899999999998874321110  011101111221        236899999999999997


Q ss_pred             CC--CCCCcEEEEeCCccc
Q psy4233         229 DP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~~  245 (303)
                      .+  ...|+.+++.+|..+
T Consensus       222 ~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          222 DESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhcCCcCCEEEECCCccc
Confidence            53  346889999887543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.90  E-value=8.3e-23  Score=174.56  Aligned_cols=216  Identities=13%  Similarity=0.041  Sum_probs=154.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999754322221111 112568999999999998887765       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh------cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE------MGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      +|++||+||....        +..+..+++|+.++.++++++..      .+..+||++||...+..     ......|+
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-----~~~~~~Y~  176 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-----VMYAAPYT  176 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-----CTTCHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-----CCCChhHH
Confidence            7999999996422        23346788999999999998744      45569999999988652     23446899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh---------HHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR---------YYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      .+|...+.+.+..       ++++..++||.+.+|......         .............|       . ..+.+.+
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~pe  248 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP-------L-GRYSTPE  248 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT-------T-SSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC-------C-CCCCCHH
Confidence            9999998887653       689999999999865321100         00011110111122       1 3578999


Q ss_pred             HHHHHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         218 DVAAAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       218 Dva~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      |+|+++++++..+.  ..|+.+++.+|..
T Consensus       249 dvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          249 EVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            99999999997543  4799999988753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.90  E-value=1.4e-22  Score=173.00  Aligned_cols=227  Identities=13%  Similarity=0.041  Sum_probs=158.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC-----------cccccc-h-hcCCCCceEEEecCCCCHHHH
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF-----------YDVRDL-R-LCGDLGQVLFQPYHPRNDDEI   81 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~-----------~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~   81 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+..           +..+.. . ......++.++.+|++|++++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            467889999999999999999999999999999998632           111110 0 001124689999999999999


Q ss_pred             HHHhc-------ccCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCC
Q psy4233          82 RKAIK-------YSNVVINLIGREFA----TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        82 ~~~~~-------~~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      .++++       ++|++||+||....    +.+...+++|+.++.++++++..    .+ ..+||++||...+..... +
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~  168 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-A  168 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-S
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-C
Confidence            88776       68999999997432    34457899999999999998743    22 458999999887643211 1


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      ......|+.+|...+.+.+..       ++++..++||.+.+|..........+...  .......++... . ..+++.
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p-~~~~~p  246 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM-P-VEVLAP  246 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS-S-CSSBCH
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc-C-cCcCCH
Confidence            123357999999999887753       68999999999998864321111111000  111111122211 1 468999


Q ss_pred             HHHHHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         217 GDVAAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       217 ~Dva~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +|+|+++++++...  ...|+.+++.+|..
T Consensus       247 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          247 EDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            99999999999753  34799999988753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.90  E-value=9.3e-23  Score=173.37  Aligned_cols=220  Identities=12%  Similarity=0.066  Sum_probs=156.0

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +..++++++++||||+|+||.+++++|+++|++|++++|+.........  ......+++++.+|++|.+++.++++   
T Consensus        19 p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           19 PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3344567789999999999999999999999999999865443322211  11122568999999999998887765   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                          ++|++||+||....        +.....+++|+.++.++++++..    .+..+||++||...+..     .....
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~  173 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG-----AFGQA  173 (269)
T ss_dssp             HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----CTTBH
T ss_pred             HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-----CCCcc
Confidence                68999999996422        23356889999999999888743    45569999999877542     13346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      .|+.+|...+.+.+..       ++++..++||.+..+......  ..... ......       .. ..+.+.+|+|++
T Consensus       174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~-------~~-~~~~~p~dvA~~  243 (269)
T 3gk3_A          174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP--QDVLEAKILPQI-------PV-GRLGRPDEVAAL  243 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------CCSGGGC-------TT-SSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc--hhHHHHHhhhcC-------Cc-CCccCHHHHHHH
Confidence            8999999988877653       689999999999887543211  11100 001111       11 346899999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ++.++..+.  ..|+.+++.+|..+|
T Consensus       244 v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          244 IAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            999997643  479999999887654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.90  E-value=9.3e-23  Score=170.80  Aligned_cols=204  Identities=12%  Similarity=0.030  Sum_probs=152.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-------QIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++|+||||+|+||++++++|+++|+       +|++++|+.......... .....+++++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999998       999999974322211111 1112468999999999999888776   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                          ++|+|||+||....        ......+++|+.++.++++++.    +.+..+||++||..++..     ..+..
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~  156 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----FRHSS  156 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTCH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----CCCCc
Confidence                58999999996422        2345678999999999998874    346679999999988753     23457


Q ss_pred             chhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+++.       .+++++++|||.+++|......        . .        . . ..+++.+|+|+++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~-~--------~-~-~~~~~~~dva~~~  217 (244)
T 2bd0_A          157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD--------D-E--------M-Q-ALMMMPEDIAAPV  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC--------S-T--------T-G-GGSBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc--------c-c--------c-c-ccCCCHHHHHHHH
Confidence            899999999988754       2689999999999988543110        0 0        0 1 2579999999999


Q ss_pred             HHHhcCCCC--CCcEEEEeCCccc
Q psy4233         224 VAACKDPDA--AGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~~~--~g~~~~i~~~~~~  245 (303)
                      +.++..+..  .++++...+++.+
T Consensus       218 ~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          218 VQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHhCCccccchheEEecccccc
Confidence            999986433  4556666555544

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.90  E-value=1.1e-22  Score=170.49  Aligned_cols=207  Identities=10%  Similarity=-0.002  Sum_probs=153.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----ccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----YSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D   89 (303)
                      .++++++||||+|+||.+++++|++ .|+.|++..|+.....         .+++++.+|++|.+++.++++     ++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------ENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------TTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---------ccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            3578999999999999999999999 7889999888754221         347899999999999998876     689


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      ++||+||....        +.....+++|+.++.++++++...-.  .++|++||...+..     ......|+.+|...
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y~asKaa~  147 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----KPNSFAYTLSKGAI  147 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----CTTBHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----CCCCchhHHHHHHH
Confidence            99999996322        23356889999999999999876432  38999999988753     13346899999999


Q ss_pred             HHHHHh-------hCCCEEEEeecceeeCCCchh-hHHHH--------HHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         160 EKEVLR-------EFPEATIFRPSDMYGSGDKFL-RYYGH--------MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       160 e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +.+.+.       .++++..++||.+.+|..... .....        .........|       . ..+.+.+|+|+++
T Consensus       148 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dvA~~v  219 (244)
T 4e4y_A          148 AQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP-------L-NRIAQPQEIAELV  219 (244)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST-------T-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC-------C-CCCcCHHHHHHHH
Confidence            998875       379999999999987632211 00000        1110111122       1 3578999999999


Q ss_pred             HHHhcCCC--CCCcEEEEeCCcc
Q psy4233         224 VAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       224 ~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++++..+.  ..|+.+++.+|..
T Consensus       220 ~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          220 IFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhcCccccccCCeEeECCCcc
Confidence            99997533  3689999988754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.90  E-value=9.8e-23  Score=170.21  Aligned_cols=207  Identities=13%  Similarity=0.073  Sum_probs=149.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------cccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~D~   90 (303)
                      +++++||||+|+||++++++|+++|++|++++|+.....+.   .    ++.++.+|++| +++.+++       .++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~----~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS---L----GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH---H----TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh---h----CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999986441111   1    27889999998 6665544       36899


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      +||+||....        +..+..+++|+.++.++++++    ++.+..++|++||...+....   ..+...|+.+|..
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~~Y~~sK~a  150 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---PVPIPAYTTAKTA  150 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TSCCHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---CCCCccHHHHHHH
Confidence            9999996321        234568889999999988887    345678999999998876321   1345689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .+.+.+..       ++++++++||.+.++...................|       . ..+.+.+|+|++++.++..+ 
T Consensus       151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~dvA~~~~~l~s~~~  222 (239)
T 2ekp_A          151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP-------M-GRWARPEEIARVAAVLCGDEA  222 (239)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT-------T-SSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcCchh
Confidence            99877653       78999999999987743211100111110111111       1 24789999999999999753 


Q ss_pred             -CCCCcEEEEeCCc
Q psy4233         231 -DAAGKIYQAVGPK  243 (303)
Q Consensus       231 -~~~g~~~~i~~~~  243 (303)
                       ...|+.+++.+|.
T Consensus       223 ~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          223 EYLTGQAVAVDGGF  236 (239)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             cCCCCCEEEECCCc
Confidence             2368899988774

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=9.9e-23  Score=174.12  Aligned_cols=215  Identities=15%  Similarity=0.055  Sum_probs=146.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+..+..+...  ......++.++.+|++|++++.++++       
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999975443322211  11112568999999999988887775       


Q ss_pred             ccCEEEEccccC----------ccccchhhhhhhcchHHHHHHHHHhc----C---CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 YSNVVINLIGRE----------FATKNFTIADANVEIPARLARLSKEM----G---VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ~~D~vi~~a~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                      ++|++||+||..          ..+.+...+++|+.++.++++++...    +   ..+||++||...+..     ....
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~  181 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-----SPER  181 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------CC
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-----CCCc
Confidence            689999999962          12334578899999999888877432    2   458999999887642     1334


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+.++......  ...... ....+|       . ..+.+.+|+|+
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p-------~-~r~~~pedvA~  251 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS--GKYDGLIESGLVP-------M-RRWGEPEDIGN  251 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------CCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc--hhHHHHHhhcCCC-------c-CCcCCHHHHHH
Confidence            68999999999887753       689999999999887533111  000000 000112       1 35789999999


Q ss_pred             HHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233         222 AIVAACKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       222 ~~~~~~~~~~--~~g~~~~i~~~~~~  245 (303)
                      ++++++....  ..|+++++.+|..+
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          252 IVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHhCccccCCCCCEEEECCCccc
Confidence            9999997544  37999999888654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=1.1e-22  Score=174.76  Aligned_cols=216  Identities=11%  Similarity=0.066  Sum_probs=158.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+...  ......+++++.+|++|.+++.++++       
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999997653322221  11122468999999999998887775       


Q ss_pred             ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ++|++||+||....         +.....+++|+.++.++++++...  ...+||++||...+...     .....|+.+
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  199 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----ETLIDYSAT  199 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----TTCHHHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----CCChhHHHH
Confidence            58999999986321         234578999999999999999764  23499999999876421     334689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++..++||.+++|...... -...........       .. ..+.+.+|+|+++++++.
T Consensus       200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~-------p~-~r~~~p~dvA~~v~~L~s  270 (291)
T 3ijr_A          200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNV-------PM-QRPGQPYELAPAYVYLAS  270 (291)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTS-------TT-SSCBCGGGTHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccC-------CC-CCCcCHHHHHHHHHHHhC
Confidence            99999887653       799999999999987321100 000111011112       22 457899999999999997


Q ss_pred             CC--CCCCcEEEEeCCccc
Q psy4233         229 DP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~~  245 (303)
                      .+  ...|+.+++.+|..+
T Consensus       271 ~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          271 SDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             GGGTTCCSCEEEESSSCCC
T ss_pred             CccCCCcCCEEEECCCccc
Confidence            53  347899999887644

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.90  E-value=9.1e-23  Score=172.93  Aligned_cols=221  Identities=14%  Similarity=0.078  Sum_probs=156.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....++.++.+|++|++++.++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999975432221111 1112468999999999999888775       5


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....         +.....+++|+.++.++++++..    .+ .+||++||...+..     ......|+.
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----~~~~~~Y~a  162 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS-----QAKYGAYKM  162 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-----CTTCHHHHH
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-----CCccHHHHH
Confidence            8999999976311         23356789999999999988643    23 59999999987653     233468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh----hhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH----VFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +|...+.+.+..       ++++..++||.+++|....  ........    .......+...... ..+.+.+|+|+++
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v  239 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS--YFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDEVASAI  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH--HHHHHHHHTTCCHHHHHHHHHTTSSS-SSCCBHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH--HHHhhhhhcCCCHHHHHHHHhccCCc-ccCCCHHHHHHHH
Confidence            999999887653       6999999999999764321  11000000    00000011111122 4578999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCccc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++++...  ...|+.+++.+|..+
T Consensus       240 ~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          240 LFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHcCccccCCCCCEEEECCCccC
Confidence            9999753  347999999888643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.90  E-value=1.9e-22  Score=171.17  Aligned_cols=216  Identities=14%  Similarity=0.023  Sum_probs=154.1

Q ss_pred             ccCCCcEEEEEcCCC-hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASG-YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +.+++++++||||+| .||.+++++|+++|++|++++|+.....+.....  ....+++++.+|++|.+++.++++    
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            345688999999998 5999999999999999999999754332222211  112469999999999999888775    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc-----CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM-----GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         .+|+|||+||....        +..+..+++|+.++.++++++...     +..+||++||...+..     ..+..
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~  172 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA-----QHSQS  172 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-----CTTCH
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-----CCCCc
Confidence               47999999996322        233468899999999999987653     4568999999887652     23457


Q ss_pred             chhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+.       .++++..++||.+..+....... ...       ...+...... ..+.+.+|+|+++
T Consensus       173 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~-------~~~~~~~~~~-~r~~~~~dva~~i  243 (266)
T 3o38_A          173 HYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SEL-------LDRLASDEAF-GRAAEPWEVAATI  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------------CCTT-SSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHH-------HHHHHhcCCc-CCCCCHHHHHHHH
Confidence            899999999998765       37899999999998764321100 000       0111111112 4578999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++..+  ...|+.+++.+|.
T Consensus       244 ~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          244 AFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHcCccccCccCCEEEEcCCc
Confidence            9999753  3478999998774

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.90  E-value=2.1e-22  Score=170.83  Aligned_cols=220  Identities=11%  Similarity=0.105  Sum_probs=159.2

Q ss_pred             ccCCCcEEEEEcCCCh--hHHHHHHHHHhCCCeEEEeecCCCcccc--cchhcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASGY--MGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLRLCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++++++++||||+|+  ||.+++++|+++|++|++++|+......  .+.......++.++.+|++|.+++.++++   
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            3467889999999998  9999999999999999999887432111  11111112369999999999998887765   


Q ss_pred             ----ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                          .+|++||+||....            +.....+++|+.++.++++++...-.  .+||++||...+..     ...
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~  157 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----MPN  157 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----CTT
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----CCC
Confidence                47999999986431            22346788999999999999976532  48999999887653     233


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ...|+.+|...+.+.+..       ++++..++||.+..+...................+.        ..+.+.+|+|+
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~dva~  229 (266)
T 3oig_A          158 YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL--------RRTTTPEEVGD  229 (266)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT--------SSCCCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC--------CCCCCHHHHHH
Confidence            468999999999887653       689999999999886433222111111111112221        24689999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +++.++..+  ...|+.+++.+|-...
T Consensus       230 ~v~~l~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          230 TAAFLFSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCCchhcCcCCEEEECCCeEEe
Confidence            999999753  3479999998886543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.90  E-value=9.8e-23  Score=173.40  Aligned_cols=216  Identities=14%  Similarity=0.105  Sum_probs=155.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +.+++++|+||||+|+||.+++++|+++|++|++++|+..+..+....  .....++.++.+|++|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            456788999999999999999999999999999999965543332211  1112468999999999998888775     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        ++|++||+||....        +.....+++|+.++.++++++.    +.+..++|++||...+..     ..+...|
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y  179 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----NMGQTNY  179 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----CTTCHHH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----CCCchHh
Confidence              58999999997432        2335688999999988888764    345679999999877542     1345789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++..++||.+..+......  ...........       .. ..+.+.+|+|++++.
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~-------~~-~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKNI-------PL-NRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGC-------TT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhcC-------Cc-CCCcCHHHHHHHHHH
Confidence            99999999887653       688999999999877433111  00100011111       11 357899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++..+  ...|+.+++.+|..
T Consensus       250 l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTSC
T ss_pred             HhCCCcCCCcCCEEEeCCCee
Confidence            99753  24799999988753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.2e-22  Score=171.88  Aligned_cols=226  Identities=15%  Similarity=0.033  Sum_probs=160.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999999754322222111 122568999999999999888775       5


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....         +.....+++|+.++.++++++..    .+..+||++||...+..    +......|+.
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~~Y~a  161 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----GFAGVAPYAA  161 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----CCTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----CCCCchhHHH
Confidence            8999999995321         23457889999999999998743    34569999999887631    1134568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-h-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-L-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+..       ++++..++||.+.+|.... . ..............+       . ..+.+.+|+|+++++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~pedvA~~v~~  233 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA-------L-KRIARPEEIAEAALY  233 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST-------T-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc-------c-CCCcCHHHHHHHHHH
Confidence            999999887763       6899999999999885432 1 000011000111122       1 347899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcccCHHHHHHH
Q psy4233         226 ACKDP--DAAGKIYQAVGPKRYLLSELLDW  253 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~~s~~e~~~~  253 (303)
                      ++..+  ...|+++++.+|..++..-+-+.
T Consensus       234 L~s~~a~~itG~~i~vdGG~~~~~~a~~~~  263 (280)
T 3tox_A          234 LASDGASFVTGAALLADGGASVTKAAENLY  263 (280)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCC------
T ss_pred             HhCccccCCcCcEEEECCCccccccccchH
Confidence            99753  24799999999987765444433

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.89  E-value=4.6e-23  Score=175.82  Aligned_cols=216  Identities=12%  Similarity=0.017  Sum_probs=156.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       ++
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999754332222222  2468999999999998887765       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +..+..+++|+.++.++++++..    .+..+||++||...+..     ......|+.+|
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asK  179 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----VGGTGAYGMSK  179 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----CTTBHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----CCCchhHHHHH
Confidence            999999996322        23456889999999998888743    45568999999887653     23446899999


Q ss_pred             HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhH-HH-HHHHhhhc---ceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY-YG-HMWRHVFR---KLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      ...+.+.+.       .++++..++||.+++|....... .. ........   ..+       . ..+.+.+|+|++++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~r~~~pedvA~~v~  251 (277)
T 3gvc_A          180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARL-------Q-GRMAAPEEMAGIVV  251 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHH-------H-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhcc-------c-cCCCCHHHHHHHHH
Confidence            999988775       37899999999998763211000 00 00000000   111       1 34789999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcccC
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +++..+  ...|+++++.+|...+
T Consensus       252 ~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          252 FLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHcCCccCCccCcEEEECCcchhc
Confidence            999753  3479999999887654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.89  E-value=9.5e-23  Score=174.87  Aligned_cols=232  Identities=13%  Similarity=0.045  Sum_probs=161.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-----------cccch--hcCCCCceEEEecCCCCHHH
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-----------VRDLR--LCGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----------~~~~~--~~~~~~~~~~~~~Dl~d~~~   80 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+....           .+...  ......++.++.+|++|.++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            446788999999999999999999999999999999873211           01100  11112568999999999999


Q ss_pred             HHHHhc-------ccCEEEEccccCc------cccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCC----
Q psy4233          81 IRKAIK-------YSNVVINLIGREF------ATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNP----  141 (303)
Q Consensus        81 ~~~~~~-------~~D~vi~~a~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~----  141 (303)
                      +.++++       ++|++||+||...      .+.....+++|+.++.++++++...-  ..++|++||...+...    
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  165 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP  165 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence            887775       6899999999732      23445789999999999999997642  3499999998765321    


Q ss_pred             --CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhh-hc-----ceeeecCC
Q psy4233         142 --PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FR-----KLAVYKKG  206 (303)
Q Consensus       142 --~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~-~~-----~~~~~~~~  206 (303)
                        +..+......|+.+|...+.+.+..       ++++..++||.+.++..........+.... ..     ........
T Consensus       166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T 3pxx_A          166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ  245 (287)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGC
T ss_pred             cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhc
Confidence              1111123457999999999887653       799999999999988654322211111000 00     00000111


Q ss_pred             CceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         207 EETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       207 ~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ... ..+.+.+|+|+++++++...  ...|+++++.+|..++
T Consensus       246 ~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          246 AMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             ccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            112 45899999999999999643  3479999999887654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.89  E-value=1.2e-22  Score=173.15  Aligned_cols=215  Identities=9%  Similarity=0.056  Sum_probs=155.1

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+  |+||.+++++|+++|++|++++|+.. ..+... .....+++.++.+|++|++++.++++      
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999999764 111111 11111347899999999998887765      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+||....            +.....+++|+.++.++++++...-  -.+||++||...+..     ......
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~  157 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----MAHYNV  157 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTCHH
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----CCCchh
Confidence             57999999996431            1234688999999999999997651  149999999877542     133467


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       +++++.++||.+.++...................|+        ..+.+.+|+|++++
T Consensus       158 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~p~dva~~~~  229 (275)
T 2pd4_A          158 MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL--------RKNVSLEEVGNAGM  229 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--------SSCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc--------CCCCCHHHHHHHHH
Confidence            999999999887653       799999999999987533211111111111111221        23678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++...  ...|+.+++.++..
T Consensus       230 ~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          230 YLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCccccCCCCCEEEECCCcc
Confidence            999742  33688899988754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.89  E-value=2.8e-23  Score=175.30  Aligned_cols=209  Identities=10%  Similarity=-0.067  Sum_probs=147.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc----cCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY----SNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~vi~   93 (303)
                      |++|+||||+|+||++++++|+++|++|++++|+......           . +.+|++|.+++.+++++    +|+|||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            4689999999999999999999999999999997543211           1 67899999999988864    599999


Q ss_pred             ccccCc-cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCC-----------------------CC
Q psy4233          94 LIGREF-ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPT-----------------------YY  145 (303)
Q Consensus        94 ~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~-----------------------~~  145 (303)
                      +||... ....+..+++|+.++.++++++.    +.+..+||++||...+..+..                       .+
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            999865 55677899999999999999885    445679999999988731100                       12


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      ..+...|+.+|...+.+.+..       ++++++++||.+.++.....  .....  .......+  .... ..+.+.+|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~--~~~~~~~~--~~~~-~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQDPR--YGESIAKF--VPPM-GRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCST-TSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh--ccchh--HHHHHHhc--cccc-CCCCCHHH
Confidence            223467999999999888653       79999999999998753311  00000  00000000  0011 24789999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +|++++.++..+  ...|+.+++.++...
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999999754  346889999887543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.89  E-value=1.5e-22  Score=174.19  Aligned_cols=218  Identities=12%  Similarity=0.057  Sum_probs=157.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC-cccccchh--cCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF-YDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|+++.|+.. ...+....  .....++.++.+|++|.+++.++++     
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999888633 11111111  1112468999999999998887664     


Q ss_pred             --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMGVE--KFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        ++|++||+||....         +.....+++|+.++.++++++...-.+  +||++||...+..     ......|+
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~  200 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-----SPHLLDYA  200 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-----CTTCHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-----CCCchHHH
Confidence              58999999996321         233578999999999999999765433  9999999988763     23346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.++++.......       .......+...... ..+.+.+|+|++++++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-------TQDKIPQFGQQTPM-KRAGQPAELAPVYVYL  272 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS-------CGGGSTTTTTTSTT-SSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999887653       7999999999999763110000       00011111111112 3478899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCccc
Q psy4233         227 CKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +..+  ...|+++++.+|..+
T Consensus       273 ~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          273 ASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            9753  247999999988755

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=2.8e-22  Score=168.30  Aligned_cols=207  Identities=14%  Similarity=0.142  Sum_probs=150.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      .++++++++||||+|+||.+++++|+++|++|++++|+.... +         .+..+.+|++|++++.++++       
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~---------~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-K---------GLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-T---------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH-H---------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            456788999999999999999999999999999999975422 1         12248899999998887765       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~  155 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----IGNQANYAA  155 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------CCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-----CCCChhHHH
Confidence            47999999996321        2345788999999999998774    356679999999876532     123468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++++++||.+.++......  ...........|       . ..+.+.+|+|+++++++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p-------~-~~~~~~~dvA~~~~~l~  225 (247)
T 1uzm_A          156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD--ERIQQGALQFIP-------A-KRVGTPAEVAGVVSFLA  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC--HHHHHHHGGGCT-------T-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC--HHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHc
Confidence            999988877653       789999999999765311100  011110111111       1 34789999999999999


Q ss_pred             cCC--CCCCcEEEEeCCccc
Q psy4233         228 KDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~  245 (303)
                      ..+  ...|+.+++.+|..+
T Consensus       226 s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          226 SEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            753  236889999887643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.89  E-value=3e-23  Score=176.37  Aligned_cols=216  Identities=14%  Similarity=0.034  Sum_probs=155.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++..+.+|++|.+++.++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            45779999999999999999999999999999999754322211111 112458899999999998888776       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  180 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-----NPGQVNYAAA  180 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----CTTBHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----CCCchhHHHH
Confidence            8999999996322        2345688999999999999874    334468999999877542     1334689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++..++||.+..+......  ...........|       . ..+.+.+|+|+++++++.
T Consensus       181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p-------~-~r~~~pedvA~~v~~L~s  250 (270)
T 3ftp_A          181 KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP--QEQQTALKTQIP-------L-GRLGSPEDIAHAVAFLAS  250 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC--HHHHHHHHTTCT-------T-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC--HHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHhC
Confidence            99988877653       689999999999865321110  001110111222       1 357899999999999996


Q ss_pred             CC--CCCCcEEEEeCCcccC
Q psy4233         229 DP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~~s  246 (303)
                      .+  ...|+++++.+|..+|
T Consensus       251 ~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          251 PQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             CCcCCccCcEEEECCCcccC
Confidence            43  3479999999886553

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.89  E-value=5.1e-23  Score=173.40  Aligned_cols=217  Identities=13%  Similarity=0.049  Sum_probs=152.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   87 (303)
                      .+++++++||||+|+||++++++|+++|++|++++|+.....+.....  ..++.++.+|++|++++.++++.       
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999753322211111  14688999999999988877654       


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++..+.++    +++.+ .+||++||...+..     ......|+.+
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----~~~~~~Y~~s  154 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----IEQYAGYSAS  154 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----CTTBHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-----CCCCccHHHH
Confidence            6999999996322        23346788998877766654    44556 79999999988753     1334689999


Q ss_pred             HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+..         ++++++++||.+++|.....  .....  ....+.-....... ..+.+.+|+|++++.+
T Consensus       155 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~--~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LPKGV--SKEMVLHDPKLNRA-GRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SCTTC--CHHHHBCBTTTBTT-CCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc--cchhh--hHHHHhhhhccCcc-CCCCCHHHHHHHHHHH
Confidence            99999887763         79999999999998742210  00000  00000000000111 2468999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCcc
Q psy4233         227 CKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~~  244 (303)
                      +..+.  ..|+.+++.+|..
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCT
T ss_pred             cCccccCCCCcEEEECCCcc
Confidence            97542  3688999987753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.89  E-value=2.4e-22  Score=166.10  Aligned_cols=201  Identities=12%  Similarity=0.021  Sum_probs=151.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~   90 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+..                   +|++|++++.++++   ++|+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCE
Confidence            3456789999999999999999999999999999998742                   79999999988776   5899


Q ss_pred             EEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          91 VINLIGREFA---------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        91 vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      +||+||....         +.....+++|+.++.++++++...-.  .++|++||...+..     ......|+.+|...
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y~asK~a~  137 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----VANTYVKAAINAAI  137 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----CTTCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----CCCchHHHHHHHHH
Confidence            9999996411         23346789999999999999876422  38999999988753     23456899999999


Q ss_pred             HHHHHhh-----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         160 EKEVLRE-----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       160 e~~~~~~-----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      +.+.+..     .+++..++||.+.+|....  ...............|.        ..+.+.+|+|++++.++..+..
T Consensus       138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dvA~~~~~l~~~~~~  209 (223)
T 3uce_A          138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV--------GKVGEASDIAMAYLFAIQNSYM  209 (223)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT--------CSCBCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC--------CCccCHHHHHHHHHHHccCCCC
Confidence            9887764     3889999999999874321  11111111111122221        3578999999999999987666


Q ss_pred             CCcEEEEeCCcccC
Q psy4233         233 AGKIYQAVGPKRYL  246 (303)
Q Consensus       233 ~g~~~~i~~~~~~s  246 (303)
                      .|+.+++.+|..++
T Consensus       210 tG~~i~vdgG~~~s  223 (223)
T 3uce_A          210 TGTVIDVDGGALLG  223 (223)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             CCcEEEecCCeecC
Confidence            89999999887653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.89  E-value=2.5e-22  Score=169.62  Aligned_cols=220  Identities=16%  Similarity=0.111  Sum_probs=154.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++||||+|+||.+++++|+++|++|++++|+...  ..+.... .....++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997543  1111111 1112468999999999999888775       6


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCC-ceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGV-EKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....        +.....+++|+.++.++++++..    .+. .+||++||...+..     ......|+.
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~  156 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----FPILSAYST  156 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----CTTCHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----CCCchhHHH
Confidence            8999999996322        23446889999999999888764    355 79999999887642     133468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--h--hcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--V--FRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      +|...+.+.+..       ++++++++||.+..+....  ........  .  ......+...... ..+.+.+|+|+++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v  233 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ--IDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAGLV  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH--HHHHHHHHHCCCTTHHHHHHHTTCTT-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh--hhhhhccccCCchHHHHHHHHhcCCC-CCccCHHHHHHHH
Confidence            999999877653       7999999999997653211  01000000  0  0000000000111 2478999999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCccc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++++..+  ...|+.+++.+|..+
T Consensus       234 ~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          234 SFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHhCcccCCCCCCEEEECCCEec
Confidence            9999753  347889999887643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.89  E-value=1.7e-22  Score=171.49  Aligned_cols=211  Identities=12%  Similarity=0.060  Sum_probs=154.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+||||+|+||++++++|+++|++|+++.++.....+.. . ......+++++.+|++|.+++.++++       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45679999999999999999999999999988766544332211 1 11123568999999999999888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|+|||+||....        +.....+++|+.++.++++++.     +.+..+||++||...+..     ......|+
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  178 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG-----NRGQVNYS  178 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC-----CTTCHHHH
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC-----CCCCchhH
Confidence            58999999996422        2345688999999999999873     445569999999876542     13457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+.++........   ........+.        ..+.+.+|+|++++++
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~p~--------~~~~~~edva~~~~~L  247 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA---LKEAMSMIPM--------KRMGQAEEVAGLASYL  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH---HHHHHHTCTT--------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH---HHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999888776552       68999999999998754322111   1111122221        3478999999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +..+  ...|+.+++.+|
T Consensus       248 ~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          248 MSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCCcccCccCCEEEeCCC
Confidence            9753  347899999876

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.89  E-value=1.8e-22  Score=168.03  Aligned_cols=186  Identities=16%  Similarity=0.088  Sum_probs=133.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      ++++|+||||+|+||++++++|+++|++|++++|+.... +.....  ..+++++.+|++|.+++.++++       ++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL-QALAAE--LEGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH--STTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHH--hhhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999974322 211111  1368899999999998887765       589


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +|||+||....        +.....+++|+.++.+++++    +++.+.++||++||..++..     ..+...|+.+|.
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK~  155 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----FKGGAAYNASKF  155 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----CTTCHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----CCCCchhhHHHH
Confidence            99999996322        23346888999998755554    45667789999999987752     234568999999


Q ss_pred             HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+.       .+++++++|||.+..+.....         . .         .  ..+++.+|+|++++.++..+
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~-~---------~--~~~~~~~dvA~~~~~l~~~~  214 (234)
T 2ehd_A          156 GLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---------P-G---------Q--AWKLKPEDVAQAVLFALEMP  214 (234)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---------c-c---------c--cCCCCHHHHHHHHHHHhCCC
Confidence            88887654       378999999998876532100         0 0         0  11579999999999999865


Q ss_pred             C
Q psy4233         231 D  231 (303)
Q Consensus       231 ~  231 (303)
                      .
T Consensus       215 ~  215 (234)
T 2ehd_A          215 G  215 (234)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.89  E-value=2.7e-22  Score=170.16  Aligned_cols=197  Identities=15%  Similarity=0.134  Sum_probs=145.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.... +...    ..++.++.+|++|.+++.++++       ++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALN----LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-HTTC----CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHhh----cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4577999999999999999999999999999999974322 1111    1368999999999998888776       68


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +..+..+++|+.++.++++++    ++.+..+||++||...+..     ......|+.+|
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~asK  163 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----FPDHAAYCGTK  163 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----CTTCHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----CCCCchHHHHH
Confidence            999999996321        233467899999999977766    3556679999999988753     23446899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchh--hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL--RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      ...+.+.+..       ++++..++||.+.++.....  .......  .....+.        ..+++.+|+|+++++++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~--------~r~~~pedvA~av~~l~  233 (266)
T 3p19_A          164 FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGY--DAWRVDM--------GGVLAADDVARAVLFAY  233 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHH--HHHHHHT--------TCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHH--Hhhcccc--------cCCCCHHHHHHHHHHHH
Confidence            9999877653       79999999999998743211  1111111  1111111        34789999999999999


Q ss_pred             cCCCC
Q psy4233         228 KDPDA  232 (303)
Q Consensus       228 ~~~~~  232 (303)
                      .++..
T Consensus       234 ~~~~~  238 (266)
T 3p19_A          234 QQPQN  238 (266)
T ss_dssp             HSCTT
T ss_pred             cCCCC
Confidence            87654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.89  E-value=2.1e-22  Score=171.66  Aligned_cols=216  Identities=14%  Similarity=0.032  Sum_probs=157.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999999754332221111 112468999999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++..    .+ -.++|++||...+....   ..+...|+
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---~~~~~~Y~  185 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---PQQVSHYC  185 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---SSCCHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---CCCcchHH
Confidence            68999999996432        23345678999999999988753    23 25899999988764311   12346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+..+...........   ....+|+        ..+.+.+|+|++++++
T Consensus       186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~~~~~p~--------~r~~~pedvA~~v~fL  254 (276)
T 3r1i_A          186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHAL---WEPKIPL--------GRMGRPEELTGLYLYL  254 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHH---HGGGSTT--------SSCBCGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHH---HHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999987763       68999999999998754432222111   1122221        3468899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCcc
Q psy4233         227 CKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~  244 (303)
                      +...  ...|+++++.+|..
T Consensus       255 ~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          255 ASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             cCccccCccCcEEEECcCcc
Confidence            9753  33789999988753

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.89  E-value=7.8e-22  Score=171.82  Aligned_cols=244  Identities=16%  Similarity=0.099  Sum_probs=154.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc----ccchh--cCCCCceEEEecCCCCHHHHHHHhc-
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV----RDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-   86 (303)
                      |+|++++++||||+|+||.+++++|+++|++|++.+|+.....    +.+..  .....++.++.+|++|.+++.++++ 
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            3466789999999999999999999999999999988642211    11110  0112468999999999999988876 


Q ss_pred             ------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                            ++|+|||+||....        +.....+++|+.++.++++++    ++.+..++|++||...+....    ..
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~----~~  156 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP----PY  156 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC----SS
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC----Cc
Confidence                  68999999996321        233467899999999999998    666778999999998874211    22


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh--------hHHHHHHHhhhccee--eecCCCceee
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL--------RYYGHMWRHVFRKLA--VYKKGEETIK  211 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~  211 (303)
                      ...|+.+|..+|.+.+..       |+++++++||.+.++...+.        ..............+  +...-.....
T Consensus       157 ~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (324)
T 3u9l_A          157 LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVP  236 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcC
Confidence            367999999999887663       78999999999986532110        011100000000000  0000000001


Q ss_pred             CceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccC-------HHHHHHHHHHHhcCC
Q psy4233         212 QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-------LSELLDWFHVVMKKG  261 (303)
Q Consensus       212 ~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s-------~~e~~~~i~~~~g~~  261 (303)
                      +..+.+|+|++++.++..+........+.++....       ..++.+.+.+.+|..
T Consensus       237 ~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          237 PDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             TTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHHHHHHHHHHHHHHHcChH
Confidence            23688999999999998764322233344554445       333444444455544

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.89  E-value=1.6e-22  Score=170.60  Aligned_cols=214  Identities=14%  Similarity=0.031  Sum_probs=151.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +++++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999753322111111 112458899999999999988776       689


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      ++||+||....        +.....+++|+.++.++++++..    .+ ..+||++||...+...     .....|+.+|
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asK  156 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PELAVYSSSK  156 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----CCchhHHHHH
Confidence            99999986321        23346789999999888877643    34 5699999998765421     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHH--------HHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGH--------MWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      ...+.+.+..       ++++++++||.+.+|..... ..+..        .........|       . ..+.+.+|+|
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dvA  228 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT-------L-GRLSEPEDVA  228 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT-------T-CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCC-------C-CCCcCHHHHH
Confidence            9999887653       78999999999987632110 00000        0000001111       1 3478999999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++++++..+  ...|+.+++.+|..
T Consensus       229 ~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          229 ACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHhCccccCCCCCEEEeCCCcc
Confidence            9999999753  34788999988754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.89  E-value=2.9e-23  Score=177.25  Aligned_cols=219  Identities=12%  Similarity=0.054  Sum_probs=158.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ....++.++.+|++|.+++.++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999754322221111  012468999999999998887765       


Q ss_pred             ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      ++|++||+||...        .+.....+++|+.++.++++++.    +.+..+||++||...+..     ......|+.
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  179 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-----QALQVHAGS  179 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-----CTTCHHHHH
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----CCCcHHHHH
Confidence            5899999999532        12345688999999999999873    334469999999877542     133468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..       ++++..++||.+.++... ................|+        ..+.+.+|+|++++++
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL--------QRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC--------CCCcCHHHHHHHHHHH
Confidence            999999887753       689999999999876311 000000111111112221        3478999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCcccCH
Q psy4233         227 CKDP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~s~  247 (303)
                      +...  ...|+++++.+|..+++
T Consensus       252 ~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          252 ASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTHHHHC
T ss_pred             cCCccCCcCCCEEEECCCcccCC
Confidence            9743  34799999998876554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.89  E-value=2.4e-22  Score=170.63  Aligned_cols=223  Identities=13%  Similarity=0.066  Sum_probs=156.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc---hhcCCCCceEEEecCCCCHHHHHHHhc---c
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL---RLCGDLGQVLFQPYHPRNDDEIRKAIK---Y   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~   87 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++++|+.....+..   ........+..+.+|++|.+++.++++   +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            3456789999999999999999999999999999999754322211   111112458889999999999888776   5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++.+++    ++.+..+||++||...+..     ......|+.+
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  160 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-----SQEMAHYSAT  160 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-----CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-----CCcchHHHHH
Confidence            8999999996422        233456899999977776665    4455679999999988752     2345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH--------HHHHHHh-hhcceeeecCCCceeeCceeHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY--------YGHMWRH-VFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      |...+.+.+..       ++++..++||.+..|..... ..        ....... .....+.    ... ..+.+.+|
T Consensus       161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~r~~~ped  235 (267)
T 3t4x_A          161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT----SII-QRLIRPEE  235 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT----CSS-CSCBCTHH
T ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc----ccc-cCccCHHH
Confidence            99999988763       47888999999886521100 00        0000000 0000110    011 45799999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +|+++++++...  ...|+++++.+|...+
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999743  3479999999987655

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.89  E-value=2.5e-22  Score=169.09  Aligned_cols=207  Identities=14%  Similarity=0.112  Sum_probs=149.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   87 (303)
                      ..+++++++||||+|+||++++++|+++|++|++++|+....          .++.++.+|++|++++.++++.      
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            446678999999999999999999999999999999975321          2378899999999998877754      


Q ss_pred             -cCEEEEccccC--------ccccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 -SNVVINLIGRE--------FATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 -~D~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       +|++||+||..        ..+.....+++|+.++.++++++..    .+..+||++||...+..     ......|+.
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  161 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-----SAGQANYAA  161 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-----HHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----CCCcHHHHH
Confidence             69999999963        2234567889999999999887643    46679999999877642     122357999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++++++||.+..+......  ...........|       . ..+++.+|+|++++.++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p-------~-~~~~~p~dvA~~i~~l~  231 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVP-------L-GRYARPEEIAATVRFLA  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCT-------T-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHh
Confidence            999999887753       689999999999876432110  000000011111       1 24789999999999999


Q ss_pred             cCC--CCCCcEEEEeCCccc
Q psy4233         228 KDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~  245 (303)
                      ..+  ...|+.+.+.+|..+
T Consensus       232 s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          232 SDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCcCcEEEECCcccc
Confidence            753  236889999887644

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=3e-22  Score=169.28  Aligned_cols=220  Identities=14%  Similarity=0.086  Sum_probs=152.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|+++.++..+..+.. . ......++.++.+|++|.+++.++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999866544332221 1 11122468999999999999888775      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccC-CCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNAD-PNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~-~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....         +.....+++|+.++.++++++...-.  .+||++||...+ ..     ......|+
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~~Y~  159 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG-----GPGALAYA  159 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-----STTCHHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-----CCCcHHHH
Confidence             58999999985311         22356889999999999999976533  389999998876 31     13346899


Q ss_pred             HHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         154 RTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       154 ~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+|...+.+.+..      .+++..+.||.+..+....... ...........|       . ..+.+.+|+|+++++++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p-------~-~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-PEVRERVAGATS-------L-KREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-hHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHc
Confidence            9999999988763      3788899999998764321110 001000111111       2 45789999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcccCHH
Q psy4233         228 KDPD--AAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~~s~~  248 (303)
                      ..+.  ..|+.+++.+|...+..
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC--
T ss_pred             CccccCccCCEEEECCCcCCCCC
Confidence            7542  37999999888765443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.89  E-value=6.5e-22  Score=168.24  Aligned_cols=214  Identities=15%  Similarity=0.090  Sum_probs=156.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|+++.|+.....+...  ......++.++.+|++|++++.++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999998776543322211  11112568999999999999888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       ++|++||+||....        +.....+++|+.++.++++++...  +..++|++||......    +......|+.+
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----~~~~~~~Y~as  183 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----PWPGISLYSAS  183 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----CSTTCHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----CCCCchHHHHH
Confidence             68999999996322        234578899999999999998764  3459999998755432    12345689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++..++||.+.++...........   ....++.        ..+.+.+|+|+++++++.
T Consensus       184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~--------~r~~~pedvA~~v~fL~s  252 (271)
T 3v2g_A          184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEA---QRERIAT--------GSYGEPQDIAGLVAWLAG  252 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHH---HHHTCTT--------SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHH---HHhcCCC--------CCCCCHHHHHHHHHHHhC
Confidence            99999887653       79999999999998754321111111   1112221        246889999999999986


Q ss_pred             CC--CCCCcEEEEeCCc
Q psy4233         229 DP--DAAGKIYQAVGPK  243 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~  243 (303)
                      ..  ...|+.+++.+|.
T Consensus       253 ~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          253 PQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             GGGTTCCSCEEEESTTT
T ss_pred             cccCCccCCEEEeCcCc
Confidence            43  3479999998774

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=1.4e-22  Score=170.96  Aligned_cols=216  Identities=14%  Similarity=0.122  Sum_probs=153.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ...+++||||||+|+||.+++++|+++|++|++++++....... .. ......++.++.+|++|.+++.++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999988544332221 11 11122468999999999998888776      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||....        +..+..+++|+.++.++++++    ++.+..+||++||...+..     ..+...|+
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  164 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----QFGQTNYS  164 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-----CSCCHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-----CCCCcccH
Confidence             57999999996422        234568999999988887766    4556679999999877642     23457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+.++.....  ............+.        ..+.+.+|+|++++.+
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l  234 (256)
T 3ezl_A          165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPV--------RRLGSPDEIGSIVAWL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999988877653       68999999999987532110  11111111112221        3478999999999999


Q ss_pred             hcCC--CCCCcEEEEeCCccc
Q psy4233         227 CKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +..+  ...|+.+++.+|..+
T Consensus       235 ~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          235 ASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCcccCCcCcEEEECCCEeC
Confidence            8643  347999999887654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=2.3e-22  Score=170.97  Aligned_cols=223  Identities=14%  Similarity=0.075  Sum_probs=156.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+....   .++++++.+|++|.+++.++++       +
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE---LPGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hcCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999975332211111   1348899999999999888775       5


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....         +..+..+++|+.++.++++++..   .+..+||++||.......     .....|+.+
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  157 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----AQAVPYVAT  157 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----TTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----CCCcccHHH
Confidence            8999999986421         12356889999999999998853   124699999998654211     234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..       ++++++++||.+++|......    .............|+        ..+.+.+|+|++++
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dva~~v~  229 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL--------GRMGQPAEVGAAAV  229 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT--------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC--------CCCcCHHHHHHHHH
Confidence            99999887763       799999999999986321100    000000000111221        23689999999999


Q ss_pred             HHhcCC-CCCCcEEEEeCCcccCHHHHHHH
Q psy4233         225 AACKDP-DAAGKIYQAVGPKRYLLSELLDW  253 (303)
Q Consensus       225 ~~~~~~-~~~g~~~~i~~~~~~s~~e~~~~  253 (303)
                      +++... ...|+.+++.+|..+.+......
T Consensus       230 ~L~s~~~~itG~~i~vdGG~~~~~~~~~~~  259 (270)
T 1yde_A          230 FLASEANFCTGIELLVTGGAELGYGCKASR  259 (270)
T ss_dssp             HHHHHCTTCCSCEEEESTTTTSCC------
T ss_pred             HHcccCCCcCCCEEEECCCeecccCcCccc
Confidence            998742 33789999999987766544443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.89  E-value=5.3e-23  Score=179.33  Aligned_cols=229  Identities=14%  Similarity=0.101  Sum_probs=165.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC----------Ccccccch-hcCCCCceEEEecCCCCHHHHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN----------FYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~----------~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.          ....+... ......++.++.+|++|.+++.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4678999999999999999999999999999998861          11111111 111124688999999999998887


Q ss_pred             hc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC----------CceEEEEecCccCC
Q psy4233          85 IK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG----------VEKFIHISALNADP  139 (303)
Q Consensus        85 ~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~Ss~~~~~  139 (303)
                      ++       ++|++||+||....        +.....+++|+.++.++++++...-          -.+||++||...+.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence            76       68999999996422        2345688999999999999875321          14899999987753


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeC
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                      .     ......|+.+|...+.+.+..       ++++..++|| +..+.....  ..     .  .   ....... ..
T Consensus       185 ~-----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~--~~-----~--~---~~~~~~~-~~  245 (322)
T 3qlj_A          185 G-----SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETV--FA-----E--M---MATQDQD-FD  245 (322)
T ss_dssp             C-----BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCS--CC-----C--------------CC
T ss_pred             C-----CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhh--hh-----h--h---hhccccc-cC
Confidence            2     133468999999999888763       6899999999 654432210  00     0  0   0001112 35


Q ss_pred             ceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCccc-----------------CHHHHHHHHHHHhcCCCC
Q psy4233         213 PVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRY-----------------LLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~-----------------s~~e~~~~i~~~~g~~~~  263 (303)
                      +++.+|+|+++++++....  ..|+.+++.+|...                 +..|+++.+.+.+|.+.+
T Consensus       246 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          246 AMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             TTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            6789999999999997533  36999999988755                 779999999999997644

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.89  E-value=2.6e-22  Score=171.66  Aligned_cols=215  Identities=14%  Similarity=0.070  Sum_probs=157.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------ccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D   89 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..+++++.+|++|.+++.++++      ++|
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            45778999999999999999999999999999999754332222222  2468999999999999988776      479


Q ss_pred             EEEEc-cccCcc-------------ccchhhhhhhcchHHHHHHHHHh----------cCCceEEEEecCccCCCCCCCC
Q psy4233          90 VVINL-IGREFA-------------TKNFTIADANVEIPARLARLSKE----------MGVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        90 ~vi~~-a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      ++||+ ++....             +.....+++|+.++.++++++..          .+..+||++||...+..     
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  180 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-----  180 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-----
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-----
Confidence            99999 543211             11357889999999999998753          23348999999988753     


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      ......|+.+|...+.+.+..       ++++..++||.+..+.....  ............+..       ..+.+.+|
T Consensus       181 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~-------~~~~~ped  251 (281)
T 3ppi_A          181 QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFP-------KRLGTPDE  251 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSS-------SSCBCHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCC-------CCCCCHHH
Confidence            234578999999988877653       68999999999986522110  011111111222211       34789999


Q ss_pred             HHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         219 VAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       219 va~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      +|++++.++..+...|+.+++.+|..++
T Consensus       252 vA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          252 FADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            9999999998766689999999987664

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=8.7e-23  Score=172.90  Aligned_cols=212  Identities=11%  Similarity=0.053  Sum_probs=155.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+......  .++.++.+|++|.+++.++++.       +
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999997543222111111  4688999999999998887653       6


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++||+||....        +..+..+++|+.++.++++++...-  ..+||++||...++.      .....|+.+|..
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------~~~~~Y~asK~a  155 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------FGLAHYAAGKLG  155 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------HHHHHHHHCSSH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------CCcHHHHHHHHH
Confidence            999999996422        2234678999999999999987642  359999999988731      234679999998


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .+.+.+..       ++++++++||.+.++......  ...........|.        ..+.+.+|+|+++++++..+ 
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~--------~~~~~p~dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP--PWAWEQEVGASPL--------GRAGRPEEVAQAALFLLSEES  225 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC--HHHHHHHHHTSTT--------CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC--HHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCccc
Confidence            88777652       789999999999987432111  1111101111221        24689999999999999753 


Q ss_pred             -CCCCcEEEEeCCccc
Q psy4233         231 -DAAGKIYQAVGPKRY  245 (303)
Q Consensus       231 -~~~g~~~~i~~~~~~  245 (303)
                       ...|+.+++.++..+
T Consensus       226 ~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          226 AYITGQALYVDGGRSI  241 (263)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCcCCEEEECCCccc
Confidence             246889999888654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.89  E-value=3.9e-22  Score=170.78  Aligned_cols=218  Identities=13%  Similarity=0.077  Sum_probs=156.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+.. . ......++.++.+|++|.+++.++++     
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999754322211 1 11112468899999999988877664     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                        ++|+|||+||....        +.....+++|+.++.++++++...  +..+||++||...+....    .....|+.
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~~Y~a  180 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV----PKHAVYSG  180 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC----SSCHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC----CCCcchHH
Confidence              58999999996422        234568999999999999999875  557999999987764211    12468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH--------HHHHHHhhhc--ceeeecCCCceeeCceeH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY--------YGHMWRHVFR--KLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~i~~  216 (303)
                      +|...+.+.+..       ++++++++||.+.++..... ..        -.........  ..|       . ..+.+.
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p  252 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP-------L-RRVGLP  252 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-------T-CSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC-------C-CCCcCH
Confidence            999999887653       79999999999987632110 00        0000000000  111       1 247899


Q ss_pred             HHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         217 GDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       217 ~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +|+|+++++++..+  ...|+.+++.+|.
T Consensus       253 ~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          253 IDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            99999999999753  2468899998774

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.89  E-value=2.9e-22  Score=170.61  Aligned_cols=214  Identities=15%  Similarity=0.076  Sum_probs=147.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      ++++|+||||+|+||.+++++|+++|++|+++.++..+..+...  ......++.++.+|++|.+++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999999999999887554443322211  11122568999999999998887765       5


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc-------CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM-------GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                      +|+|||+||....         +.....+++|+.++.++++++...       +..+||++||...+....    .....
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~~  180 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----TQYVD  180 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT----TTCHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC----CCcch
Confidence            7999999996432         233568899999999999887543       345899999987754211    12356


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       +++++.++||.+.++..... ............       ... ..+.+.+|+|++++
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~-------~~~-~~~~~~edvA~~i~  251 (272)
T 4e3z_A          181 YAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPS-------VPM-QRAGMPEEVADAIL  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------C-------CTT-SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhc-------CCc-CCCcCHHHHHHHHH
Confidence            999999999877653       78999999999998753321 111111001111       111 34678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCc
Q psy4233         225 AACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~  243 (303)
                      .++..+  ...|+.|++.+|.
T Consensus       252 ~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          252 YLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCccccccCCEEeecCCC
Confidence            999643  2468999998763

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.89  E-value=6.4e-22  Score=169.31  Aligned_cols=224  Identities=16%  Similarity=0.061  Sum_probs=156.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.++++      
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4456789999999999999999999999999999999754322221111 122468999999999998887765      


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|++||+||....         +..+..+++|+.++.++++++    ++.+..+||++||...+...   +......|
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---~~~~~~~Y  180 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---TTPGATAY  180 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---CSTTCHHH
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---CCCCchHH
Confidence             58999999996321         233468899999999999988    55566799999998775421   11345689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCcee--eCceeHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETI--KQPVYVGDVAAAI  223 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~Dva~~~  223 (303)
                      +.+|...+.+.+..       ++++..++||.+..+............  .......... ....  ..+.+.+|+|+++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~-~~p~~~~r~~~pedvA~~v  257 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE--TAIPVEWPKG-QVPITDGQPGRSEDVAELI  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHH--HSCCCBCTTC-SCGGGTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchh--hhhhhhhhhh-cCccccCCCCCHHHHHHHH
Confidence            99999999888763       588999999999887543211000000  0000000000 0000  2357899999999


Q ss_pred             HHHhcCC--CCCCcEEEEeCCc
Q psy4233         224 VAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       224 ~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++...  ...|+.+++.+|.
T Consensus       258 ~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          258 RFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHcCccccCCcCCEEEECcCc
Confidence            9999753  2369999998875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.88  E-value=1e-21  Score=167.07  Aligned_cols=217  Identities=15%  Similarity=0.076  Sum_probs=156.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|+++.|+..+..+...  ......++.++.+|++|.+++.++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999998876544332211  11112568999999999999888775      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVE--KFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       ++|++||+||....        +..+..+++|+.++.++++++...-.+  ++|++||......    +......|+.+
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~~Y~as  170 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----SVPKHSLYSGS  170 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----CCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----CCCCCchhHHH
Confidence             57999999996422        234578899999999999998765433  9999999873221    11345689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchh---------hHH-HHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL---------RYY-GHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      |...+.+.+..       ++++..++||.+.++.....         ... ...........|       . ..+.+.+|
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~d  242 (270)
T 3is3_A          171 KGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP-------L-HRNGWPQD  242 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST-------T-CSCBCHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC-------C-CCCCCHHH
Confidence            99999887763       79999999999998743210         000 000000111122       1 34688999


Q ss_pred             HHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         219 VAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       219 va~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      +|+++++++...  ...|+.+++.+|.
T Consensus       243 vA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          243 VANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            999999999743  2468999998774

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.88  E-value=1.7e-22  Score=169.62  Aligned_cols=211  Identities=13%  Similarity=0.012  Sum_probs=155.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..+++++.+|++|++++.++++       +
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            467889999999999999999999999999999999754332222222  2468999999999999888776       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....        +..+..+++|+.++.+++++    +++.+ ..++|++||...+..     ......|+.
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  155 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-----TPNMAAYVA  155 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-----CTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-----CCCchhhHH
Confidence            8999999996322        23456889999999999888    45555 579999999877542     133568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+..       ++++..++||.+..+....  ......+   .....++        ..+.+.+|+|+++++
T Consensus       156 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~--------~r~~~pedva~~v~~  224 (247)
T 3rwb_A          156 AKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGF---VEMLQAM--------KGKGQPEHIADVVSF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHH---HHHHSSS--------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHH---Hhccccc--------CCCcCHHHHHHHHHH
Confidence            999998877653       7899999999998753211  0010011   0111111        346789999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCc
Q psy4233         226 ACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++..+  ...|+.+++.+|.
T Consensus       225 L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          225 LASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCccccCCCCCEEEECCCc
Confidence            99754  2378999998774

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=9.4e-22  Score=165.25  Aligned_cols=208  Identities=13%  Similarity=0.081  Sum_probs=146.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCC-CHHHHHHHhcccCEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-NDDEIRKAIKYSNVVI   92 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~D~vi   92 (303)
                      ..+++++++||||+|+||++++++|+++|++|++++|+.. ..+.   .   .++.++ +|+. +.+.+.+.+.++|+||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~---~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-LLKR---S---GHRYVV-CDLRKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-HHHH---T---CSEEEE-CCTTTCHHHHHHHSCCCSEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-HHHh---h---CCeEEE-eeHHHHHHHHHHHhcCCCEEE
Confidence            3457889999999999999999999999999999999752 1111   1   246777 9983 3344444444799999


Q ss_pred             EccccCcc--------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          93 NLIGREFA--------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      |+||....        +.....+++|+.++.++.+    .+++.+..+||++||..++...     .....|+.+|...+
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~  161 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----ENLYTSNSARMALT  161 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTBHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----CCCchHHHHHHHHH
Confidence            99996322        2334678899988776654    4455677899999999887631     33468999999999


Q ss_pred             HHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233         161 KEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--  230 (303)
Q Consensus       161 ~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--  230 (303)
                      .+.+.       .++++++++||.+++|......  ..... ......|       . ..+.+.+|+|++++.++..+  
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p-------~-~~~~~~~dvA~~i~~l~s~~~~  231 (249)
T 1o5i_A          162 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIP-------M-RRMAKPEEIASVVAFLCSEKAS  231 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTST-------T-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcCcccc
Confidence            87765       3789999999999988532110  00000 0111111       1 35789999999999998753  


Q ss_pred             CCCCcEEEEeCCcc
Q psy4233         231 DAAGKIYQAVGPKR  244 (303)
Q Consensus       231 ~~~g~~~~i~~~~~  244 (303)
                      ...|+.+++.+|..
T Consensus       232 ~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          232 YLTGQTIVVDGGLS  245 (249)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CCCCCEEEECCCcc
Confidence            23688999988753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.88  E-value=4.8e-22  Score=171.61  Aligned_cols=210  Identities=13%  Similarity=0.013  Sum_probs=143.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            45678999999999999999999999999999999754332221111 112468999999999999888775       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||+||....        +.....+++|+.++.++++++.    +.+ ..+||++||...+..     ......|+.
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  183 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----NAGLGTYGV  183 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----CCCchHHHH
Confidence            8999999996322        2335688999999999999863    333 469999999988753     234568999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHH-HHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +|...+.+.+..       +++++.++||.+..+........... ..........++..... ..+++.+|+|++++.+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pedvA~~i~~~  262 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQ-DESVSADDVARLTADA  262 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccc-cCCCCHHHHHHHHHHH
Confidence            999998877653       68999999999986532211000000 00000111112222223 4689999999999999


Q ss_pred             hcCCC
Q psy4233         227 CKDPD  231 (303)
Q Consensus       227 ~~~~~  231 (303)
                      ++.+.
T Consensus       263 l~~~~  267 (301)
T 3tjr_A          263 ILANR  267 (301)
T ss_dssp             HHHTC
T ss_pred             HhcCC
Confidence            98643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.88  E-value=4.7e-22  Score=172.91  Aligned_cols=225  Identities=14%  Similarity=0.074  Sum_probs=155.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc--------cccch-----hcCCCCceEEEecCCCCHHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD--------VRDLR-----LCGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+....        .+.+.     ......++.++.+|++|++++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5678999999999999999999999999999998762211        01100     0111246899999999999988


Q ss_pred             HHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCC
Q psy4233          83 KAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPP  142 (303)
Q Consensus        83 ~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~  142 (303)
                      ++++       ++|++||+||....        +.....+++|+.++.++++++..    .+ -.+||++||...+... 
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-  202 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA-  202 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-
Confidence            8775       58999999996422        23456889999999999988743    22 3589999998887531 


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-----hhcceeeecCCCcee
Q psy4233         143 TYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-----VFRKLAVYKKGEETI  210 (303)
Q Consensus       143 ~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  210 (303)
                          .....|+.+|...+.+.+..       ++++..++||.+.+|..........+...     .......+.......
T Consensus       203 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  278 (317)
T 3oec_A          203 ----PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP  278 (317)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC
Confidence                33468999999999887763       78999999999987632211111111000     000000000111111


Q ss_pred             eCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         211 KQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ..+++.+|+|+++++++...  ...|+++++.+|...
T Consensus       279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            46789999999999999643  347999999888653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.88  E-value=1.3e-21  Score=166.10  Aligned_cols=203  Identities=14%  Similarity=0.060  Sum_probs=149.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++|+||||+|+||++++++|+++|   ++|++++|+...............+++++.+|++|.+++.++++      
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            567899999999999999999999999   99999999765432111111112469999999999988888776      


Q ss_pred             ---ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHHhc----------C-----CceEEEEecCccCC
Q psy4233          87 ---YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSKEM----------G-----VEKFIHISALNADP  139 (303)
Q Consensus        87 ---~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~Ss~~~~~  139 (303)
                         ++|+|||+||...         .+.....+++|+.++.++++++...          +     ..+||++||...+.
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  178 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  178 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence               6999999999643         1233467899999999999988543          2     46899999998875


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeC
Q psy4233         140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                      ....  ..+...|+.+|...+.+++..       ++++++++||.+..+....                         ..
T Consensus       179 ~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~  231 (267)
T 1sny_A          179 QGNT--DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------------SA  231 (267)
T ss_dssp             TTCC--SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------------TC
T ss_pred             cCCC--CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------------CC
Confidence            4221  124568999999999887653       7999999999987653210                         12


Q ss_pred             ceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         213 PVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +++.+|+|+.++.++...  ...|..+++ ++..+.
T Consensus       232 ~~~~~~~a~~~~~~~~~~~~~~~G~~~~~-~g~~~~  266 (267)
T 1sny_A          232 PLDVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPLA  266 (267)
T ss_dssp             SBCHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBCC
T ss_pred             CCCHHHHHHHHHHHHHhcCcCCCCcEEcc-CCcCcC
Confidence            478899999999999753  235655544 444343

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.88  E-value=1.5e-21  Score=164.56  Aligned_cols=217  Identities=15%  Similarity=0.070  Sum_probs=155.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      ++++++++||||+|+||.+++++|+++|++|+++.++.....+...  ......++.++.+|++|.+++..+++.     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999987555443322211  112235688999999999888776643     


Q ss_pred             --------cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233          88 --------SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        88 --------~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                              +|++||+||....        +..+..+++|+.++.++++++...  +..++|++||...+..     ....
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~  158 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----LPDF  158 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-----CTTB
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-----CCCc
Confidence                    8999999996322        223457889999999999998764  2348999999888653     1334


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+..+.......-...........+       . ..+.+.+|+|++
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~  230 (255)
T 3icc_A          159 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA-------F-NRLGEVEDIADT  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST-------T-SSCBCHHHHHHH
T ss_pred             chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC-------c-CCCCCHHHHHHH
Confidence            68999999999887653       79999999999998753321111101100111111       1 346899999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++.++..+  ...|+.+++.+|..
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          231 AAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             HHHHhCcccCCccCCEEEecCCee
Confidence            99998643  34799999988753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.88  E-value=1.7e-21  Score=163.86  Aligned_cols=202  Identities=15%  Similarity=0.093  Sum_probs=137.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------~   87 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++      +
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            456789999999999999999999999999999999754432221111 112568999999999999988876      5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+..     ......|+.+
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  158 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-----GSGFAAFASA  158 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-----CTTCHHHHHH
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-----CCCCccHHHH
Confidence            7999999996322        233468899999999988877    4445569999999887652     1335689999


Q ss_pred             HHHHHHHHHhh-------CCCE-EEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         156 KYQGEKEVLRE-------FPEA-TIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~-~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      |...+.+.+..       ++++ ..+.||.+..+.....  .....       ......... . +.+.+|+|+++++++
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~--~~~~~-------~~~~~~~~~-~-~~~pedvA~~~~~l~  227 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER--REQMF-------GKDALANPD-L-LMPPAAVAGAYWQLY  227 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc--chhhh-------hhhhhcCCc-c-CCCHHHHHHHHHHHH
Confidence            99999887763       6788 7899999887643211  11110       001111112 3 799999999999999


Q ss_pred             cCCCC
Q psy4233         228 KDPDA  232 (303)
Q Consensus       228 ~~~~~  232 (303)
                      ..+..
T Consensus       228 s~~~~  232 (252)
T 3h7a_A          228 QQPKS  232 (252)
T ss_dssp             HCCGG
T ss_pred             hCchh
Confidence            86443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.88  E-value=1.9e-21  Score=164.69  Aligned_cols=194  Identities=19%  Similarity=0.205  Sum_probs=140.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....+++++.+|++|.+++.++++       
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999975432221111 1112568999999999999887765       


Q ss_pred             ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      .+|+|||+||...         .+.....+++|+.++.++++++.    +.+..+||++||...+..     ......|+
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~  180 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----VADGAAYT  180 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----CTTCHHHH
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----CCCCchHH
Confidence            3899999999621         12334688999999999988864    355679999999988753     23457899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+..+.....         . ...       .. ..+++.+|+|++++.+
T Consensus       181 asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~-~~~-------~~-~~~~~p~dvA~~v~~l  242 (262)
T 3rkr_A          181 ASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL---------S-AKK-------SA-LGAIEPDDIADVVALL  242 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc---------c-ccc-------cc-ccCCCHHHHHHHHHHH
Confidence            9999999887653       79999999999976532210         0 011       11 3468999999999999


Q ss_pred             hcCCC
Q psy4233         227 CKDPD  231 (303)
Q Consensus       227 ~~~~~  231 (303)
                      +..+.
T Consensus       243 ~s~~~  247 (262)
T 3rkr_A          243 ATQAD  247 (262)
T ss_dssp             HTCCT
T ss_pred             hcCcc
Confidence            98643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.88  E-value=5.1e-22  Score=169.02  Aligned_cols=198  Identities=13%  Similarity=-0.015  Sum_probs=146.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+||||+|+||++++++|++ +|++|++++|+.....+..... ....+++++.+|++|.+++.++++       
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999 9999999999754322211111 112468999999999999888776       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCC--C-------------
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPN--P-------------  141 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~--~-------------  141 (303)
                      ++|+|||+||....        ...+..+++|+.++.++++++...-.  .+||++||..++..  .             
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            68999999996421        23356799999999999999987532  49999999876521  0             


Q ss_pred             ---------------------CCCCCCCCCchhHHHHHHHHHHHh-----------hCCCEEEEeecceeeCCCchhhHH
Q psy4233         142 ---------------------PTYYISGGSQFYRTKYQGEKEVLR-----------EFPEATIFRPSDMYGSGDKFLRYY  189 (303)
Q Consensus       142 ---------------------~~~~~~~~~~y~~~K~~~e~~~~~-----------~~~~~~ilrp~~~~G~~~~~~~~~  189 (303)
                                           ...+..+...|+.+|...+.+++.           .+++++.++||++.++....    
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----  237 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----  237 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc----
Confidence                                 001112447899999999887754           26899999999998663221    


Q ss_pred             HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC----CCCcEEE
Q psy4233         190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD----AAGKIYQ  238 (303)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~g~~~~  238 (303)
                                           ..+.+.+|+|++++.++..+.    ..|+.+.
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                                 136899999999999997542    3565554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=4.3e-22  Score=170.15  Aligned_cols=202  Identities=19%  Similarity=0.115  Sum_probs=143.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+.   +...+...+++++.+|++|++++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999999999975332211   1111112458899999999999888775      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcch----HHHHHHHHHhcCC--ceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEI----PARLARLSKEMGV--EKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|+|||+||....        ......+++|+.+    ++.++..+++.+.  .+||++||..++..   .+..+...
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~~~  186 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---LPLSVTHF  186 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---CSCGGGHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---CCCCCCch
Confidence             68999999996322        2335688999999    6777777777775  79999999988742   12234467


Q ss_pred             hhHHHHHHHHHHHh---------hCCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR---------EFPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       152 y~~~K~~~e~~~~~---------~~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      |+.+|...+.+.+.         .++++++++||.+.++... .........  . ...       .. ..+++.+|+|+
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~-~~~-------~~-~~~~~~~dvA~  255 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA--A-ATY-------EQ-MKCLKPEDVAE  255 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH--H-HHH-------C----CBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH--h-hhc-------cc-ccCCCHHHHHH
Confidence            99999998877653         3689999999999876311 000000000  0 000       11 34789999999


Q ss_pred             HHHHHhcCCC
Q psy4233         222 AIVAACKDPD  231 (303)
Q Consensus       222 ~~~~~~~~~~  231 (303)
                      +++.++..+.
T Consensus       256 ~i~~l~~~~~  265 (279)
T 1xg5_A          256 AVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHSCT
T ss_pred             HHHHHhcCCc
Confidence            9999998644

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.88  E-value=5.5e-22  Score=169.01  Aligned_cols=215  Identities=12%  Similarity=0.039  Sum_probs=155.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------~   87 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++      +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            356789999999999999999999999999999999765433222111 122568999999999988887765      5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+.     +..+...|+.+
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----~~~~~~~Y~as  184 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----PKSVVTAYAAT  184 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----CCTTBHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----CCCCchhhHHH
Confidence            8999999996322        233467899999999999987    344567999999998876     22334569999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHHHHHHhhhcce-eeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKL-AVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+..       ++++..++||.+..+...... ............. |+        ..+...+|+|++++++
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v~fL  256 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM--------GRAGRPEEMVGAALFL  256 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT--------CSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc--------CCCcCHHHHHHHHHHH
Confidence            99999887653       689999999999865321110 0011111111111 11        2367899999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +...  ...|+.+++.+|
T Consensus       257 ~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          257 ASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HSGGGTTCCSCEEEESSC
T ss_pred             cCcccCCCCCCEEEeCCC
Confidence            9753  237889998776

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.88  E-value=1.2e-21  Score=166.06  Aligned_cols=218  Identities=10%  Similarity=-0.070  Sum_probs=156.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +++++++++||||+|.||.+++++|+++|++|++++|+.....+.....   ....++.++.+|++|.+++.++++    
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3467889999999999999999999999999999999754322211111   112348999999999998887764    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         ++|++||+||....        +.....+++|+.++.++++++..    .+..+||++||...+..     ......
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~  158 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----EPHMVA  158 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----CTTBHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----CCCchh
Confidence               57999999996322        23356889999999999998743    34568999999887653     133468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh--------HHHHHHHh--hhcceeeecCCCceeeCce
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR--------YYGHMWRH--VFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~i  214 (303)
                      |+.+|...+.+.+..       ++++..++||.+.+|......        ....+...  ....+|+        ..+.
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~  230 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL--------GRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT--------CSCB
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc--------CCCc
Confidence            999999999887653       689999999999875321100        00001000  1111221        3478


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         215 YVGDVAAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +.+|+|+++++++...  ...|+.+++.+|..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            9999999999999743  34799999988754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.88  E-value=1.8e-21  Score=169.99  Aligned_cols=213  Identities=13%  Similarity=0.077  Sum_probs=154.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccchhc--CCCCceEEEecCCCCHH-------------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLRLC--GDLGQVLFQPYHPRNDD-------------   79 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~-------------   79 (303)
                      +++++++||||+|+||.+++++|+++|++|++++ |+.....+.....  ....++.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5678999999999999999999999999999999 7643221111110  11246899999999988             


Q ss_pred             ----HHHHHhc-------ccCEEEEccccCc----------------------cccchhhhhhhcchHHHHHHHHH----
Q psy4233          80 ----EIRKAIK-------YSNVVINLIGREF----------------------ATKNFTIADANVEIPARLARLSK----  122 (303)
Q Consensus        80 ----~~~~~~~-------~~D~vi~~a~~~~----------------------~~~~~~~~~~n~~~~~~l~~~~~----  122 (303)
                          ++.++++       ++|+|||+||...                      .+.....+++|+.++.++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8887765       5899999999632                      12223578999999999988775    


Q ss_pred             hcC------CceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHH
Q psy4233         123 EMG------VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYY  189 (303)
Q Consensus       123 ~~~------~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~  189 (303)
                      +.+      ..+||++||...+..     ......|+.+|..++.+.+..       ++.++.++||.+..+. ...   
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---  274 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---  274 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---
T ss_pred             hcCCcCCCCCcEEEEECchhhccC-----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---
Confidence            334      569999999987652     234468999999999887663       7899999999999886 221   


Q ss_pred             HHHHHhhhcceeeecCCCceee-CceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         190 GHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ...+......+|+        . .+.+.+|+|+++++++..+  ...|+.+++.+|..+
T Consensus       275 ~~~~~~~~~~~p~--------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          275 PAVWEGHRSKVPL--------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHHHHHHHTTCTT--------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhhCCC--------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            1111111112221        1 3688999999999999642  346889999887654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.87  E-value=4.8e-21  Score=164.19  Aligned_cols=224  Identities=13%  Similarity=0.047  Sum_probs=157.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc---------------cccch--hcCCCCceEEEecCCCCH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD---------------VRDLR--LCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~---------------~~~~~--~~~~~~~~~~~~~Dl~d~   78 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+....               .+...  ......++.++.+|++|.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5678999999999999999999999999999998863211               11110  111235689999999999


Q ss_pred             HHHHHHhc-------ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCcc
Q psy4233          79 DEIRKAIK-------YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNA  137 (303)
Q Consensus        79 ~~~~~~~~-------~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~  137 (303)
                      +++.++++       ++|++||+||....         +.....+++|+.++.++++++...    + ..+||++||...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            99888765       58999999996322         233468899999999999987432    2 358999999988


Q ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcc-----eeee-c
Q psy4233         138 DPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK-----LAVY-K  204 (303)
Q Consensus       138 ~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~-----~~~~-~  204 (303)
                      +..     ......|+.+|...+.+.+..       ++++..++||.+..|..........+.......     .... .
T Consensus       169 ~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T 3uve_A          169 LKA-----YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM  243 (286)
T ss_dssp             TSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT
T ss_pred             ccC-----CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh
Confidence            753     133468999999999887753       689999999999988543221111110000000     0000 0


Q ss_pred             CCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         205 KGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       205 ~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ..... ..+.+.+|+|+++++++...  ...|+.+++.+|..+
T Consensus       244 ~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          244 FHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            00111 35789999999999999753  347999999888654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.87  E-value=8.4e-22  Score=166.02  Aligned_cols=212  Identities=11%  Similarity=-0.005  Sum_probs=151.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++||||+|+||.+++++|+++|  +.|++..|+.....+.....  ..++.++.+|++|.+++.++++       ++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            5799999999999999999999985  78888888743322211111  1468999999999999888775       58


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |++||+||....         +.....+++|+.++.++++++    ++.+ .++|++||...+..     ......|+.+
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-----~~~~~~Y~as  153 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-----FSSWGAYGSS  153 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-----SCCSHHHHHH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-----CCCcchHHHH
Confidence            999999996322         233468899999999999988    4545 69999999887652     2345689999


Q ss_pred             HHHHHHHHHhh-----CCCEEEEeecceeeCCCchhh-------HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-----FPEATIFRPSDMYGSGDKFLR-------YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       156 K~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      |...+.+.+..     ++++..++||.+..+......       .............|.        ..+.+.+|+|+++
T Consensus       154 K~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~p~dva~~v  225 (254)
T 3kzv_A          154 KAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN--------NQLLDSSVPATVY  225 (254)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT--------C----CHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc--------CCcCCcccHHHHH
Confidence            99999988763     789999999999987432110       001111111111221        3478999999999


Q ss_pred             HHHhcCCC---CCCcEEEEeCCccc
Q psy4233         224 VAACKDPD---AAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~~---~~g~~~~i~~~~~~  245 (303)
                      ++++..+.   ..|+.+++.+++..
T Consensus       226 ~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          226 AKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHHhhcccCCCCccEEEecCcccc
Confidence            99997553   47889988776643

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.87  E-value=3.6e-21  Score=164.24  Aligned_cols=222  Identities=14%  Similarity=0.032  Sum_probs=154.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC------------cccccc-h-hcCCCCceEEEecCCCCHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF------------YDVRDL-R-LCGDLGQVLFQPYHPRNDDEI   81 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~------------~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~   81 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+..            ...+.. . ......++.++.+|++|.+++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            56789999999999999999999999999999988421            111111 1 111225689999999999998


Q ss_pred             HHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCC
Q psy4233          82 RKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNP  141 (303)
Q Consensus        82 ~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~  141 (303)
                      .++++       ++|++||+||....        +..+..+++|+.++.++++++.    +.+ ..+||++||...+.. 
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-  167 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM-  167 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC-
Confidence            88765       48999999996432        2335679999999999998853    333 358999999988653 


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh--HHHHHHHhhhcceeeecCCCceeeC
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR--YYGHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                          ......|+.+|...+.+.+..       ++++..++||.+..|......  .................... . ..
T Consensus       168 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p-~r  241 (277)
T 3tsc_A          168 ----QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL-P-DW  241 (277)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSS-S-CS
T ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhcc-C-CC
Confidence                133467999999999888753       689999999999877433111  00100000000111111111 1 23


Q ss_pred             ceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         213 PVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      +.+.+|+|+++++++..+.  ..|+.+++.+|..
T Consensus       242 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          242 VAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            7899999999999997533  4789999988753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.87  E-value=6.1e-21  Score=164.59  Aligned_cols=223  Identities=15%  Similarity=0.058  Sum_probs=156.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-----------ccc-ch-hcCCCCceEEEecCCCCHHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-----------VRD-LR-LCGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----------~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+....           .+. .. ......++.++.+|++|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4578999999999999999999999999999999873211           111 00 1111256899999999999988


Q ss_pred             HHhc-------ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc-----CCceEEEEecCccCCCC
Q psy4233          83 KAIK-------YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM-----GVEKFIHISALNADPNP  141 (303)
Q Consensus        83 ~~~~-------~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~  141 (303)
                      ++++       ++|++||+||....         +.....+++|+.++.++++++...     +..+||++||...+.. 
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~-  184 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG-  184 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-
Confidence            8775       58999999996322         233578999999999999987432     3569999999988753 


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhh-hcc------eeeecCCC
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FRK------LAVYKKGE  207 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~-~~~------~~~~~~~~  207 (303)
                          ......|+.+|..++.+.+..       ++++..++||.+.+|..........+.... ...      ...... .
T Consensus       185 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  259 (299)
T 3t7c_A          185 ----AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH-V  259 (299)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS-S
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc-c
Confidence                133468999999999887663       689999999999988543211111110000 000      000000 0


Q ss_pred             ceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         208 ETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       208 ~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      .. ..+.+.+|+|+++++++..+  ...|+++++.+|..+
T Consensus       260 ~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          260 LP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            11 24789999999999999753  247999999888654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.87  E-value=2.6e-21  Score=166.03  Aligned_cols=216  Identities=14%  Similarity=0.060  Sum_probs=152.9

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC-Ccccccchhc--CCCCceEEEecCCCC----HHHHHHHh
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN-FYDVRDLRLC--GDLGQVLFQPYHPRN----DDEIRKAI   85 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~~~~~Dl~d----~~~~~~~~   85 (303)
                      ..++++++++||||+|+||.+++++|+++|++|++++|+. ....+.....  ....++.++.+|++|    .+++.+++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3456788999999999999999999999999999999986 3221111110  112468999999999    88888776


Q ss_pred             c-------ccCEEEEccccCccc------------------cchhhhhhhcchHHHHHHHHHhc----C------CceEE
Q psy4233          86 K-------YSNVVINLIGREFAT------------------KNFTIADANVEIPARLARLSKEM----G------VEKFI  130 (303)
Q Consensus        86 ~-------~~D~vi~~a~~~~~~------------------~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v  130 (303)
                      +       ++|+|||+||.....                  .....+++|+.++..+++++...    +      ..+||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            5       589999999963211                  12357889999999998887542    2      35999


Q ss_pred             EEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeee
Q psy4233         131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVY  203 (303)
Q Consensus       131 ~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~  203 (303)
                      ++||...+..     ......|+.+|...+.+.+..       +++++.++||.+++|. .....   .........+. 
T Consensus       178 ~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~---~~~~~~~~~p~-  247 (288)
T 2x9g_A          178 NLCDAMVDQP-----CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEE---EKDKWRRKVPL-  247 (288)
T ss_dssp             EECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHH---HHHHHHHTCTT-
T ss_pred             EEecccccCC-----CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChH---HHHHHHhhCCC-
Confidence            9999988652     234467999999888877653       7899999999999886 21111   11101111221 


Q ss_pred             cCCCceeeCc-eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         204 KKGEETIKQP-VYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       204 ~~~~~~~~~~-i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                             ..+ .+.+|+|+++++++...  ...|+.+++.+|..+
T Consensus       248 -------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          248 -------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             -------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence                   124 78999999999999752  347889999887544

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.87  E-value=3.2e-21  Score=163.98  Aligned_cols=199  Identities=15%  Similarity=0.069  Sum_probs=138.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.....+  .++.++.+|++|.+++.++++       ++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            356789999999999999999999999999999997543322222222  468999999999999888776       68


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      |++||+||....         +.....+++|+.++.++++++..    .+  -.+||++||...+..     ......|+
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~  178 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----RPYSAPYT  178 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----CTTCHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----CCCchHHH
Confidence            999999996322         22346889999998888887643    33  359999999887752     23456899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       ++++..++||.+..|.......  .. .......       .. ..+.+.+|+|++++++
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~-~~~~~~~-------~~-~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA--GV-PQADLSI-------KV-EPVMDVAHVASAVVYM  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc--cc-hhhhhcc-------cc-cCCCCHHHHHHHHHHH
Confidence            9999999987653       6899999999998764321100  00 0000111       11 3478999999999999


Q ss_pred             hcCCCC
Q psy4233         227 CKDPDA  232 (303)
Q Consensus       227 ~~~~~~  232 (303)
                      +.++..
T Consensus       248 ~s~~~~  253 (272)
T 4dyv_A          248 ASLPLD  253 (272)
T ss_dssp             HHSCTT
T ss_pred             hCCCCc
Confidence            987544

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.87  E-value=5.9e-22  Score=172.37  Aligned_cols=211  Identities=12%  Similarity=-0.002  Sum_probs=139.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++++++||||||+|+||.+++++|+++|++|++++|+.....+...   ..+...++.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999997543322211   11211268999999999999888775     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----------CCceEEEEecCccCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----------GVEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                        ++|+|||+||....        +.....+++|+.++.++++++...          +..+||++||...+...     
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~-----  159 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA-----  159 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----
Confidence              46999999996322        234568999999999999887543          23479999999887631     


Q ss_pred             CCCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcc--eeeecCCCceeeCceeHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK--LAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~  217 (303)
                      .....|+.+|..++.+.+.       .++++++++||.+.++...........+......  ..............++.+
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  239 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD  239 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence            2346799999966655543       2799999999999887433211111111000000  000000011101238999


Q ss_pred             HHHHHHHHHhcCC
Q psy4233         218 DVAAAIVAACKDP  230 (303)
Q Consensus       218 Dva~~~~~~~~~~  230 (303)
                      |+|++++.+++++
T Consensus       240 ~vA~~~~~al~~~  252 (319)
T 3ioy_A          240 VIGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcC
Confidence            9999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.87  E-value=6.3e-22  Score=167.60  Aligned_cols=214  Identities=11%  Similarity=0.053  Sum_probs=149.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.++++       +
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999753322111111 112458899999999998887665       5


Q ss_pred             cCEEEEccccC-c--------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGRE-F--------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~-~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|+|||+||.. .        .+.....+++|+.++.++++++..    .+..+||++||...+...     .....|+.
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~a  159 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----PNMAAYGT  159 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----TTBHHHHH
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----CCCchHHH
Confidence            89999999864 1        123356888999999999888754    355799999998775421     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH---------H---HH-HHHhhhcceeeecCCCceeeCc
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY---------Y---GH-MWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~---------~---~~-~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      +|...+.+.+..       +++++.++||.+..+..... ..         .   .. .........|+        ..+
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~  231 (262)
T 1zem_A          160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------RRY  231 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------SSC
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC--------CCC
Confidence            999988877652       78999999998876532110 00         0   00 00000011111        236


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      .+.+|+|+++++++..+  ...|+.+++.+|
T Consensus       232 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          232 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            78999999999998753  236888888664

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.87  E-value=1.8e-21  Score=165.16  Aligned_cols=213  Identities=15%  Similarity=0.062  Sum_probs=148.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++..++.....+....  .....++.++.+|++|.+++.++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999986655443332221  1112468999999999999888775       


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      ++|++||+||....        +..+..+++|+.++.++++++...-  -.++|++||......     ......|+.+|
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK  179 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-----HPSYGIYAAAK  179 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC-----CTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC-----CCCchHHHHHH
Confidence            58999999996322        2234677899999999999886531  248999999877542     13346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++++..++||.+..+...... ............|       . ..+.+.+|+|+++++++..
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p-------~-~r~~~pedvA~~v~~L~s~  250 (267)
T 3u5t_A          180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAP-------L-ERLGTPQDIAGAVAFLAGP  250 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSST-------T-CSCBCHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHhCc
Confidence            9999988763       689999999999876421100 0000000111122       1 3478999999999999975


Q ss_pred             CC--CCCcEEEEeCC
Q psy4233         230 PD--AAGKIYQAVGP  242 (303)
Q Consensus       230 ~~--~~g~~~~i~~~  242 (303)
                      ..  ..|+.+++.+|
T Consensus       251 ~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          251 DGAWVNGQVLRANGG  265 (267)
T ss_dssp             TTTTCCSEEEEESSS
T ss_pred             cccCccCCEEEeCCC
Confidence            43  37889998776

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.87  E-value=5.7e-21  Score=160.36  Aligned_cols=207  Identities=16%  Similarity=0.110  Sum_probs=145.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   91 (303)
                      |+++||||+|+||.+++++|+++|++|++++|+.....+......  .++.++.+|++|++++.++++       ++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            579999999999999999999999999999997533222111111  358999999999999998876       58999


Q ss_pred             EEccccCc---------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREF---------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||+||...         .+.....+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+|..
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa  153 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----YAGGNVYGATKAF  153 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----CTTCHHHHHHHHH
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----CCCCchHHHHHHH
Confidence            99999642         12334688999999998888875    445679999999987642     2334689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+.+.+..       +++++.++||.+. .+.....  ....   .......+    .. ..+++.+|+|+++++++..+
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~---~~~~~~~~----~~-~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGD---DGKAEKTY----QN-TVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCc---hHHHHHHH----hc-cCCCCHHHHHHHHHHHhcCC
Confidence            99987663       6899999999998 4532110  0000   00000000    11 23579999999999999864


Q ss_pred             C-CCCcEEEEeCC
Q psy4233         231 D-AAGKIYQAVGP  242 (303)
Q Consensus       231 ~-~~g~~~~i~~~  242 (303)
                      . ..++.+.+...
T Consensus       224 ~~~~g~~i~v~~~  236 (248)
T 3asu_A          224 AHVNINTLEMMPV  236 (248)
T ss_dssp             TTCCCCEEEECCT
T ss_pred             ccceeeEEEEccc
Confidence            3 35667776544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=4.2e-21  Score=163.27  Aligned_cols=209  Identities=16%  Similarity=0.096  Sum_probs=144.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~v   91 (303)
                      ++++||||+|+||.+++++|+++|++|++++|+.....+.........++.++.+|++|.+++.++++.       +|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            789999999999999999999999999999997533222111111113689999999999999988865       4999


Q ss_pred             EEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCc-eEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          92 INLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVE-KFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        92 i~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      ||+||....         +..+..+++|+.++.++++++.    +.+.. +||++||...+..     ......|+.+|.
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----~~~~~~Y~asKa  176 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----YPGSHVYGGTKA  176 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----CTTCHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----CCCCchHHHHHH
Confidence            999986421         2334678999999887777663    45566 9999999987642     123468999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+..       +++++.++||.+.++.....  ....   ........    .. ..+++.+|+|+++++++..+
T Consensus       177 a~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~---~~~~~~~~----~~-~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGD---QARYDKTY----AG-AHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             HHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------C-CCCBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccc---hHHHHHhh----cc-CCCCCHHHHHHHHHHHhCCC
Confidence            999988763       68999999999987742210  0000   00000000    01 23589999999999999854


Q ss_pred             CC-CCcEEEEeCC
Q psy4233         231 DA-AGKIYQAVGP  242 (303)
Q Consensus       231 ~~-~g~~~~i~~~  242 (303)
                      .. .++.+.+.++
T Consensus       247 ~~~~g~~i~v~~~  259 (272)
T 2nwq_A          247 AHLNINSLEIMPV  259 (272)
T ss_dssp             TTEEEEEEEEEET
T ss_pred             ccCccceEEEeec
Confidence            32 5566666554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.87  E-value=4.1e-21  Score=159.91  Aligned_cols=203  Identities=14%  Similarity=0.039  Sum_probs=147.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      |++++||||+|+||.+++++|+++|++|++++|+.....+.....  ....++.++.+|++|++++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999999754322211111  112468999999999999998876       58


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |++||+||....        +.....+++|+.++.++++++...   +..++|++||......     ......|+.+|.
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~~sKa  156 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----IPYGGGYVSTKW  156 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----CTTCHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----CCCcchHHHHHH
Confidence            999999996322        234568899999999999988542   2346777777665432     123467999999


Q ss_pred             HHHHHHHhh-----CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         158 QGEKEVLRE-----FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       158 ~~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      ..+.+.+..     ++++..++||.+..+.....         .  .      .... ..+++.+|+|++++.++..+..
T Consensus       157 a~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~---------~--~------~~~~-~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          157 AARALVRTFQIENPDVRFFELRPGAVDTYFGGSK---------P--G------KPKE-KGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---------S--C------CCGG-GTCBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---------C--C------cccc-cCCCCHHHHHHHHHHHHcCCCC
Confidence            999988764     79999999999976532210         0  0      0111 2578999999999999987543


Q ss_pred             --CCcEEEEeCCc
Q psy4233         233 --AGKIYQAVGPK  243 (303)
Q Consensus       233 --~g~~~~i~~~~  243 (303)
                        .+++....+++
T Consensus       219 ~~~~~~~~~~~~~  231 (235)
T 3l77_A          219 VRVEELMLRSVYQ  231 (235)
T ss_dssp             CCCCEEEECCTTS
T ss_pred             CccceEEEeeccc
Confidence              45555444444

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.87  E-value=3.7e-21  Score=162.83  Aligned_cols=212  Identities=15%  Similarity=0.082  Sum_probs=143.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999999754322211111 112468899999999998887765       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----~~~~~~Y~as  156 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----VPTAAVYCAT  156 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----CCCChhHHHH
Confidence            8999999996422        2345688999999998888763    345679999999988753     1334679999


Q ss_pred             HHHHHHHHHhh-----CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         156 KYQGEKEVLRE-----FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       156 K~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      |...+.+.+..     ++++..++||.+..+.......  ..   .......     .. ..+.+.+|+|+++++++..+
T Consensus       157 Kaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~--~~---~~~~~~~-----~~-~~~~~pedvA~~v~~l~s~~  225 (264)
T 3tfo_A          157 KFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH--EE---TMAAMDT-----YR-AIALQPADIARAVRQVIEAP  225 (264)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc--hh---HHHHHHh-----hh-ccCCCHHHHHHHHHHHhcCC
Confidence            99999887663     6889999999998764321100  00   0000000     01 22578999999999999875


Q ss_pred             CC--CCcEEEEeCCc
Q psy4233         231 DA--AGKIYQAVGPK  243 (303)
Q Consensus       231 ~~--~g~~~~i~~~~  243 (303)
                      ..  .+++.....++
T Consensus       226 ~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          226 QSVDTTEITIRPTAS  240 (264)
T ss_dssp             TTEEEEEEEEEECC-
T ss_pred             ccCccceEEEecCcc
Confidence            54  34344444443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.87  E-value=2.2e-21  Score=161.56  Aligned_cols=190  Identities=15%  Similarity=0.065  Sum_probs=139.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      |++++++||||+|+||.+++++|+++|++|++++|+.....+.....+  .++.++.+|++|.+++.++++       ++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999997543222222211  258999999999998887765       47


Q ss_pred             CEEEEccccCc--------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREF--------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||...        .+.....+++|+.++.++++++..    .+ .++|++||...+..     ......|+.+|
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~-----~~~~~~Y~asK  152 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVG-----KANESLYCASK  152 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSS-----CSSHHHHHHHH
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCC-----CCCCcHHHHHH
Confidence            99999999632        234457889999999998888743    23 39999999877652     12346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++++..++||.+..+.....         .  ..       .. ..+.+.+|+|++++.++.+
T Consensus       153 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---------~--~~-------~~-~~~~~pedvA~~v~~l~~~  213 (235)
T 3l6e_A          153 WGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT---------D--HV-------DP-SGFMTPEDAAAYMLDALEA  213 (235)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc---------C--CC-------CC-cCCCCHHHHHHHHHHHHhC
Confidence            9999888763       68899999999976632210         0  00       01 2478999999999999986


Q ss_pred             CCC
Q psy4233         230 PDA  232 (303)
Q Consensus       230 ~~~  232 (303)
                      +..
T Consensus       214 ~~~  216 (235)
T 3l6e_A          214 RSS  216 (235)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.87  E-value=8.1e-22  Score=165.93  Aligned_cols=212  Identities=12%  Similarity=0.038  Sum_probs=150.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCC--CCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHP--RNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl--~d~~~~~~~~~----   86 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ....++.++.+|+  +|.+++.++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999754322211111  0113588999999  88888877665    


Q ss_pred             ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                         ++|++||+||....         +.....+++|+.++.++++++    ++.+..+||++||...+..     .....
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~  163 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-----RANWG  163 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-----CTTCH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-----CCCCc
Confidence               58999999996321         123468899999999999988    4556679999999887652     13446


Q ss_pred             chhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      .|+.+|...+.+.+..      .+++..+.||.+..+.      ....   . ..       ... ..+.+.+|+|++++
T Consensus       164 ~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~------~~~~---~-~~-------~~~-~~~~~p~dva~~~~  225 (252)
T 3f1l_A          164 AYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM------RASA---F-PT-------EDP-QKLKTPADIMPLYL  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH------HHHH---C-TT-------CCG-GGSBCTGGGHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch------hhhh---C-Cc-------cch-hccCCHHHHHHHHH
Confidence            8999999999888764      2678888998876431      1111   0 00       011 24678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcccCHHH
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRYLLSE  249 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~s~~e  249 (303)
                      +++..+  ...|+.+++.+|...++.|
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC-------
T ss_pred             HHcCccccCCCCCEEEeCCCcCCCCCC
Confidence            999754  2478999999998776643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=2.4e-21  Score=161.40  Aligned_cols=197  Identities=9%  Similarity=0.013  Sum_probs=146.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---------   86 (303)
                      |++++++||||+|+||++++++|+++|++|++++|+.....         ....++.+|++|.+++.++++         
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999999999999999999764321         236778999999998887765         


Q ss_pred             ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ++|+|||+||....         +.....+++|+.++.++++++...-  ..++|++||...+..     ......|+.+
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s  146 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----TPSMIGYGMA  146 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----CTTBHHHHHH
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----CCCcHHHHHH
Confidence            58999999996321         2234678899999999999887631  249999999887642     2344689999


Q ss_pred             HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+..         +++++.++||.+.++...      ..   .. .       ... ..+++.+|+|++++.+
T Consensus       147 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~------~~---~~-~-------~~~-~~~~~~~dvA~~i~~~  208 (236)
T 1ooe_A          147 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR------KW---MP-N-------ADH-SSWTPLSFISEHLLKW  208 (236)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH------HH---ST-T-------CCG-GGCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh------hc---CC-C-------ccc-cccCCHHHHHHHHHHH
Confidence            99999887653         388999999998865211      00   00 0       011 2457889999999977


Q ss_pred             hcC---CCCCCcEEEEeCCcc
Q psy4233         227 CKD---PDAAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~---~~~~g~~~~i~~~~~  244 (303)
                      +..   ....|+.+++.++..
T Consensus       209 l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          209 TTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             HHCGGGCCCTTCEEEEEEETT
T ss_pred             HcCCCcccccccEEEEecCCC
Confidence            632   233688888877653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=8e-22  Score=167.84  Aligned_cols=195  Identities=12%  Similarity=0.049  Sum_probs=144.9

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ..+++++++|+||||+|+||.+++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++    
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            345677889999999999999999999999999999999753322211111 112468999999999998887765    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         ++|+|||+||....        ......+++|+.++.++++++    ++.+..+||++||..++..     ..+...
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~  179 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-----VPFLLA  179 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-----HHHHHH
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----CCCchh
Confidence               58999999996432        223468899999987777766    3456779999999988752     123467


Q ss_pred             hhHHHHHHHHHHHhh----------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE----------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       152 y~~~K~~~e~~~~~~----------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      |+.+|...+.+++..          ++++++++||++.++....            ...       .. ..+++.+|+|+
T Consensus       180 Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------------~~~-------~~-~~~~~~~dva~  239 (272)
T 1yb1_A          180 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------PST-------SL-GPTLEPEEVVN  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------THH-------HH-CCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------------ccc-------cc-cCCCCHHHHHH
Confidence            999999999877642          6889999999998774221            000       11 35789999999


Q ss_pred             HHHHHhcCCC
Q psy4233         222 AIVAACKDPD  231 (303)
Q Consensus       222 ~~~~~~~~~~  231 (303)
                      +++.++.++.
T Consensus       240 ~i~~~~~~~~  249 (272)
T 1yb1_A          240 RLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHHcCC
Confidence            9999998643

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.87  E-value=2e-21  Score=166.49  Aligned_cols=214  Identities=12%  Similarity=0.073  Sum_probs=154.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++++++||||+|+||.+++++|+++|+   +|+++.|+.....+...   ......++.++.+|++|.+++.++++   
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999987   99999997543222111   11112468999999999999988876   


Q ss_pred             ----ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ----~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                          ++|++||+||...         .+.....+++|+.++.++++++    ++.+..+||++||...+..     ....
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----~~~~  185 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA-----YPTG  185 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----CTTC
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-----CCCC
Confidence                4799999999632         1234578999999999999988    4456679999999887642     2344


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ..|+.+|...+.+.+..       ++++..++||.+..+.... ........   ....      ..  ..+++.+|+|+
T Consensus       186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~---~~~~------~~--~~p~~pedvA~  254 (287)
T 3rku_A          186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQA---KNVY------KD--TTPLMADDVAD  254 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHH---HHHH------TT--SCCEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHH---HHhh------cc--cCCCCHHHHHH
Confidence            68999999999887763       6899999999998763110 00000000   0000      00  12458999999


Q ss_pred             HHHHHhcCCCC--CCcEEEEeCCccc
Q psy4233         222 AIVAACKDPDA--AGKIYQAVGPKRY  245 (303)
Q Consensus       222 ~~~~~~~~~~~--~g~~~~i~~~~~~  245 (303)
                      ++++++..+..  .|+++.+.+++..
T Consensus       255 ~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          255 LIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHHHHhCCCCCeEecceEEeeCCCCC
Confidence            99999986543  5788888887653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.87  E-value=4.3e-21  Score=164.88  Aligned_cols=214  Identities=13%  Similarity=0.082  Sum_probs=153.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccchhc--CCCCceEEEecCCCCHH------------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLRLC--GDLGQVLFQPYHPRNDD------------   79 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~------------   79 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++ |+.....+.....  ....++.++.+|++|.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            35678999999999999999999999999999999 7643221111111  11246899999999998            


Q ss_pred             -----HHHHHhc-------ccCEEEEccccCc----------------------cccchhhhhhhcchHHHHHHHHH---
Q psy4233          80 -----EIRKAIK-------YSNVVINLIGREF----------------------ATKNFTIADANVEIPARLARLSK---  122 (303)
Q Consensus        80 -----~~~~~~~-------~~D~vi~~a~~~~----------------------~~~~~~~~~~n~~~~~~l~~~~~---  122 (303)
                           ++.++++       ++|++||+||...                      .+.....+++|+.++.++++++.   
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 8887765       5899999999632                      12234678999999999988875   


Q ss_pred             -hcC------CceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH
Q psy4233         123 -EMG------VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY  188 (303)
Q Consensus       123 -~~~------~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~  188 (303)
                       +.+      ..+||++||...+..     ......|+.+|...+.+.+..       ++.+..++||.+..+. . .. 
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~-  237 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-  237 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC-
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCC-----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC-
Confidence             334      469999999987652     234568999999999887653       6899999999987664 2 11 


Q ss_pred             HHHHHHhhhcceeeecCCCceee-CceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         189 YGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                       ...........|+        . .+.+.+|+|+++++++..+  ...|+.+++.+|..+
T Consensus       238 -~~~~~~~~~~~p~--------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          238 -PAVWEGHRSKVPL--------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             -HHHHHHHHTTCTT--------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -HHHHHHHHhhCCC--------CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence             1111111111221        1 3678999999999999743  347889999887654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=2.2e-21  Score=163.10  Aligned_cols=194  Identities=12%  Similarity=0.077  Sum_probs=140.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcC-CCCceEEEecCCCCHHHHHHHhc----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCG-DLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~-~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+...   ... ...++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999997543222111   111 12568999999999998887765    


Q ss_pred             ---ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 ---YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                         ++|++||+||....       +.....+++|+.++.++++++    ++.+..++|++||...+..     ..+...|
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y  158 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----FADGGIY  158 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------CCTTHH
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----CCCCcch
Confidence               48999999996322       233468899999999999887    3455679999999877642     1335789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++..++||.+..+..          .......+       . ..+++.+|+|+++++
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~----------~~~~~~~~-------~-~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA----------KKAGTPFK-------D-EEMIQPDDLLNTIRC  220 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH----------HHTTCCSC-------G-GGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh----------hhcCCCcc-------c-ccCCCHHHHHHHHHH
Confidence            99999999887653       68999999998874411          00111111       1 347999999999999


Q ss_pred             HhcCCC
Q psy4233         226 ACKDPD  231 (303)
Q Consensus       226 ~~~~~~  231 (303)
                      ++..+.
T Consensus       221 l~s~~~  226 (250)
T 3nyw_A          221 LLNLSE  226 (250)
T ss_dssp             HHTSCT
T ss_pred             HHcCCC
Confidence            998654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.86  E-value=2.4e-21  Score=163.00  Aligned_cols=196  Identities=12%  Similarity=0.049  Sum_probs=148.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~   88 (303)
                      .++++|+||||+|+||.+++++|+++|++|++++|+.....           ...+.+|++|.+++.++++.       +
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999999864321           23578899999988887653       6


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |+|||+||....         +.....+++|+.++.++++++...-.  .+||++||...+..     ......|+.+|.
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sKa  163 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----TSGMIAYGATKA  163 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----CTTBHHHHHHHH
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----CCCCchhHHHHH
Confidence            999999996321         23346788999999999999876422  38999999887642     234568999999


Q ss_pred             HHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         158 QGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       158 ~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      ..+.+.+..         ++++..++||.+.++...      ..    ....       .. ..+++.+|+|++++.++.
T Consensus       164 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~------~~----~~~~-------~~-~~~~~~~dva~~i~~l~~  225 (251)
T 3orf_A          164 ATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR------KY----MSDA-------NF-DDWTPLSEVAEKLFEWST  225 (251)
T ss_dssp             HHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHH------HH----CTTS-------CG-GGSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchh------hh----cccc-------cc-cccCCHHHHHHHHHHHhc
Confidence            999988752         578899999988754211      00    1111       12 457899999999999998


Q ss_pred             C---CCCCCcEEEEeCCccc
Q psy4233         229 D---PDAAGKIYQAVGPKRY  245 (303)
Q Consensus       229 ~---~~~~g~~~~i~~~~~~  245 (303)
                      .   ....|+.+++.+++..
T Consensus       226 ~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          226 NSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             CGGGCCCTTCEEEEEEETTE
T ss_pred             CccccCCcceEEEEecCCcc
Confidence            7   4457999999877654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=5.4e-21  Score=163.39  Aligned_cols=204  Identities=14%  Similarity=0.061  Sum_probs=140.1

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      ..++++++++||||+|+||.+++++|+++|++|++++|+.....+......  ....+.++.+|++|.+++.++++    
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345678899999999999999999999999999999997543222111110  01225899999999998887765    


Q ss_pred             ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                         ++|++||+||....         +..+..+++|+.++.++++++..    .+  ..+||++||...+..     ...
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~  182 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----RPN  182 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----CTT
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----CCC
Confidence               47999999996322         23346889999998888877643    32  359999999887652     234


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ...|+.+|...+.+.+..       ++++..++||.+..+.....         .. .... .........+++.+|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---------~~-~~~~-~~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM---------ST-GVLQ-ANGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------C-EEEC-TTSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh---------cc-hhhh-hhhcccccCCCCHHHHHH
Confidence            578999999999887653       68999999999986632210         00 0000 001111134789999999


Q ss_pred             HHHHHhcCCCC
Q psy4233         222 AIVAACKDPDA  232 (303)
Q Consensus       222 ~~~~~~~~~~~  232 (303)
                      ++++++.++..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999987654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.86  E-value=3.2e-21  Score=160.05  Aligned_cols=189  Identities=14%  Similarity=0.065  Sum_probs=137.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc----CEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS----NVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----D~vi~   93 (303)
                      |++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++.+    |+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            468999999999999999999999999999999754332222111  246889999999999999998774    99999


Q ss_pred             ccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233          94 LIGREFA--------TKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        94 ~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      +||....        +..+..+++|+.++.++++++...-.   .++|++||...+..     ......|+.+|...+.+
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----KAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----CCCCchhHHHHHHHHHH
Confidence            9996322        23346889999999999998765321   29999999988753     23457899999999998


Q ss_pred             HHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         163 VLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       163 ~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      .+..       ++++..++||.+..+....          .....+       . ..+.+.+|+|++++.++.++.
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~-------~-~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWET----------SGKSLD-------T-SSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHh----------cCCCCC-------c-ccCCCHHHHHHHHHHHHhCcC
Confidence            7763       6899999999988653211          111111       1 457899999999999987543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.86  E-value=7.5e-21  Score=161.35  Aligned_cols=217  Identities=13%  Similarity=0.076  Sum_probs=157.5

Q ss_pred             ccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhc--CCCCceEEEecCCCCHHHHHHHhc--
Q psy4233          14 SSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK--   86 (303)
Q Consensus        14 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--   86 (303)
                      +++++++++||||+  |+||.+++++|+++|++|+++.|+.... .+.....  ....+++++.+|++|.+++.++++  
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            34578899999999  9999999999999999999998876543 1211111  012468999999999999887765  


Q ss_pred             -----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 -----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 -----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                           ++|++||+||....        +.....+++|+.++.++++++    ++.+..++|++||...+....   ....
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~  172 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF---PQEQ  172 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS---SSCC
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC---CCCC
Confidence                 46999999996422        233568899999999999988    445566999999987764311   1234


Q ss_pred             CchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..      .+.+..+.||.+..+...... .....   .....|       . ..+.+.+|+|++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~-------~-~r~~~~~dva~~  241 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQL---WHSMIP-------M-GRDGLAKELKGA  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHH---HHTTST-------T-SSCEETHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHH---HHhcCC-------C-CCCcCHHHHHhH
Confidence            68999999999988764      267888999999876433211 11111   111222       1 357899999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++.++...  ...|+.+++.+|..
T Consensus       242 ~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          242 YVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             hheeecCccccccCCEEEECCcee
Confidence            99999753  23689999988764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.86  E-value=5.4e-21  Score=161.06  Aligned_cols=212  Identities=10%  Similarity=-0.033  Sum_probs=143.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH----HhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK----AIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~----~~~~~D~vi~   93 (303)
                      |++++||||+|+||.+++++|+++|++|++++|+...............++..+  |..+.+.+.+    .+.++|++||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            468999999999999999999999999999999754322111110001233333  6555443322    2346899999


Q ss_pred             ccccC-cc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          94 LIGRE-FA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        94 ~a~~~-~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      +||.. ..        +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+|...+
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~  153 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----WKELSTYTSARAGAC  153 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----CTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----CCCchHHHHHHHHHH
Confidence            99964 21        2335688999999999888874    445579999999887642     133468999999999


Q ss_pred             HHHHhh-------CCCEEEEeecceeeCCCchh--hHH----HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         161 KEVLRE-------FPEATIFRPSDMYGSGDKFL--RYY----GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       161 ~~~~~~-------~~~~~ilrp~~~~G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+.+..       +++++.++||.++||.....  +.+    ...........+.        ..+.+.+|+|+++++++
T Consensus       154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~--------~~~~~p~dvA~~v~~l~  225 (254)
T 1zmt_A          154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL--------QRLGTQKELGELVAFLA  225 (254)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS--------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC--------CCCcCHHHHHHHHHHHh
Confidence            877653       79999999999987753211  110    0010000111111        23689999999999999


Q ss_pred             cCCC--CCCcEEEEeCCcc
Q psy4233         228 KDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       228 ~~~~--~~g~~~~i~~~~~  244 (303)
                      ..+.  ..|+.+++.++..
T Consensus       226 s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          226 SGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             TTSCGGGTTCEEEESTTCC
T ss_pred             CcccCCccCCEEEECCCch
Confidence            7543  3688999988754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.86  E-value=4.5e-20  Score=152.61  Aligned_cols=209  Identities=11%  Similarity=0.084  Sum_probs=153.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi   92 (303)
                      +++|+++||||++.||.++++.|+++|.+|++.+|+.+.....     ...++..+.+|++|+++++++++.   .|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----RHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            4689999999999999999999999999999999976443221     125689999999999999887764   89999


Q ss_pred             EccccCc------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233          93 NLIGREF------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        93 ~~a~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+||...      .+.++..+++|+.++..+.+++..    .+ .+||++||.......     .....|+.+|..+..+
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~-----~~~~~Y~asKaav~~l  157 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS-----ADRPAYSASKGAIVQL  157 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC-----SSCHHHHHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC-----CCCHHHHHHHHHHHHH
Confidence            9999632      234567899999999888887643    23 589999999876421     2346899999999988


Q ss_pred             HHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--CC
Q psy4233         163 VLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD--AA  233 (303)
Q Consensus       163 ~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  233 (303)
                      .+..       ++++..+.||.+..|.......-....+.....+|+        .-+...+|+|.++++++....  ..
T Consensus       158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl--------gR~g~peeiA~~v~fLaSd~a~~iT  229 (242)
T 4b79_A          158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL--------ARWGEAPEVASAAAFLCGPGASFVT  229 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT--------CSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCchhcCcc
Confidence            7763       789999999999877432111001111111223332        236789999999999997432  37


Q ss_pred             CcEEEEeCCc
Q psy4233         234 GKIYQAVGPK  243 (303)
Q Consensus       234 g~~~~i~~~~  243 (303)
                      |+++.+.+|-
T Consensus       230 G~~l~VDGG~  239 (242)
T 4b79_A          230 GAVLAVDGGY  239 (242)
T ss_dssp             SCEEEESTTG
T ss_pred             CceEEECccH
Confidence            8999998774

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.86  E-value=1e-20  Score=161.73  Aligned_cols=216  Identities=13%  Similarity=0.018  Sum_probs=153.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ..++.++.+|++|.+++.++++       +
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH--GGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--BTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            467889999999999999999999999999999999754322221121  2468999999999988887665       4


Q ss_pred             cCEEEEccccCccc-------------cchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          88 SNVVINLIGREFAT-------------KNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        88 ~D~vi~~a~~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                      +|++||+||.....             ..+..+++|+.++.++++++...   +-.++|++||...+..     ......
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~  154 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----NGGGPL  154 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----SSSCHH
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----CCCCch
Confidence            79999999963211             13457789999999999987532   1259999999887652     233467


Q ss_pred             hhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh--HHHH------HHHhhhcceeeecCCCceeeCceeHH
Q psy4233         152 FYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR--YYGH------MWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       152 y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                      |+.+|...+.+.+..      .+++..+.||.+..+......  ....      .........|+        ..+.+.+
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pe  226 (281)
T 3zv4_A          155 YTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI--------GRMPALE  226 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT--------SSCCCGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC--------CCCCCHH
Confidence            999999999988764      378889999999876322100  0000      00001112221        3468899


Q ss_pred             HHHHHHHHHhcCCC---CCCcEEEEeCCccc
Q psy4233         218 DVAAAIVAACKDPD---AAGKIYQAVGPKRY  245 (303)
Q Consensus       218 Dva~~~~~~~~~~~---~~g~~~~i~~~~~~  245 (303)
                      |+|+++++++..+.   ..|+.+++.+|..+
T Consensus       227 dvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          227 EYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             GGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             HHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            99999999998332   47999999888653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.85  E-value=6.7e-21  Score=159.83  Aligned_cols=198  Identities=15%  Similarity=0.125  Sum_probs=143.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.++++       +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999999753322111111 112468999999999999887765       5


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++++++..    .+ .+||++||...+..     ......|+.+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----~~~~~~Y~as  158 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----VRNAAVYQAT  158 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----CCCCcHHHHH
Confidence            8999999996321        23346789999999999988743    34 69999999887652     1334689999


Q ss_pred             HHHHHHHHHh-------hCCCEEEEeecceeeCCCchh--hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL--RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+.       .+++++.++||.+.++.....  .......    ...+    +  . ..+++.+|+|++++++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~----~~~~----~--~-~~~~~pedvA~~v~~l  227 (247)
T 2jah_A          159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMY----EQRI----S--Q-IRKLQAQDIAEAVRYA  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHH----HHHT----T--T-SCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHH----Hhcc----c--c-cCCCCHHHHHHHHHHH
Confidence            9998887765       279999999999987742211  0111111    1111    1  1 1258999999999999


Q ss_pred             hcCC
Q psy4233         227 CKDP  230 (303)
Q Consensus       227 ~~~~  230 (303)
                      +..+
T Consensus       228 ~s~~  231 (247)
T 2jah_A          228 VTAP  231 (247)
T ss_dssp             HHSC
T ss_pred             hCCC
Confidence            9854

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.85  E-value=1.4e-20  Score=157.21  Aligned_cols=197  Identities=8%  Similarity=-0.029  Sum_probs=146.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---------   86 (303)
                      .++++++||||+|+||++++++|+++|++|++++|+.....         ....++.+|++|++++.++++         
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            34679999999999999999999999999999999754321         136778999999998887765         


Q ss_pred             ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ++|++||+||....         +.....+++|+.++.++++++...  .-.+||++||...+..     ......|+.+
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  150 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----TPGMIGYGMA  150 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----CTTBHHHHHH
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----CCCchHHHHH
Confidence            58999999996321         123467889999999999988653  1249999999988652     1334689999


Q ss_pred             HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |...+.+.+..         +++++.++||.+..+...      ..   .. .       ... ..+++.+|+|++++.+
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~------~~---~~-~-------~~~-~~~~~~~~vA~~v~~l  212 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR------KS---MP-E-------ADF-SSWTPLEFLVETFHDW  212 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH------HH---ST-T-------SCG-GGSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc------cc---Cc-c-------hhh-ccCCCHHHHHHHHHHH
Confidence            99999888753         478899999988644110      00   00 0       111 3467889999999999


Q ss_pred             hcCCC--CCCcEEEEeCCcc
Q psy4233         227 CKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~~  244 (303)
                      +....  ..|+.+++.+++.
T Consensus       213 ~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          213 ITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HTTTTCCCTTCEEEEEEETT
T ss_pred             hcCCCcCccceEEEEeCCCC
Confidence            97533  3688888877543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.85  E-value=7e-21  Score=161.11  Aligned_cols=221  Identities=14%  Similarity=0.085  Sum_probs=149.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc--cccch--hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++++++++||||+|.||.+++++|+++|++|+++.|.....  .+...  ......++.++.+|++|.+++.++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            456788999999999999999999999999999988754321  11111  11112568999999999999888775   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                          ++|++||+||....        +.....+++|+.++.++++++...  +..++|++||...+...     .....|
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~-----~~~~~Y  161 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT-----GFYSTY  161 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-----CCCCC-
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-----CCCchh
Confidence                58999999996322        233467889999999999998764  33589999998775421     234689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++..++||.+..+......        .............. ..+.+.+|+|+++++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~~~~-~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE--------TKESTAFHKSQAMG-NQLTKIEDIAPIIKF  232 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------------CC-CCSCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--------chHHHHHHHhcCcc-cCCCCHHHHHHHHHH
Confidence            99999999888763       689999999988754211000        00000111111111 346899999999999


Q ss_pred             HhcCC-CCCCcEEEEeCCcccCHH
Q psy4233         226 ACKDP-DAAGKIYQAVGPKRYLLS  248 (303)
Q Consensus       226 ~~~~~-~~~g~~~~i~~~~~~s~~  248 (303)
                      ++... ...|+.+++.+|......
T Consensus       233 L~s~~~~itG~~i~vdGg~~~~~~  256 (262)
T 3ksu_A          233 LTTDGWWINGQTIFANGGYTTREG  256 (262)
T ss_dssp             HHTTTTTCCSCEEEESTTCCCC--
T ss_pred             HcCCCCCccCCEEEECCCccCCCc
Confidence            99752 237899999888655443

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.85  E-value=3.8e-20  Score=157.21  Aligned_cols=215  Identities=11%  Similarity=-0.021  Sum_probs=151.4

Q ss_pred             CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++++||||  +|+||.+++++|+++|++|++++|+.....+...... ..++.++.+|++|++++.++++       
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999  9999999999999999999999997543222221111 2358899999999999888776       


Q ss_pred             ---ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                         ++|++||+||....             +.....+++|+.++.++++++...-  -.+||++||...++.      ..
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~------~~  157 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM------PA  157 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC------TT
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc------Cc
Confidence               78999999996431             1234578899999999999986531  148999999876432      33


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh------hHHH----HHHHhhhcceeeecCCCceee
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL------RYYG----HMWRHVFRKLAVYKKGEETIK  211 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~  211 (303)
                      ...|+.+|...+.+.+..       ++++..++||.+..+.....      ....    ..........|+     .  +
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----~--r  230 (269)
T 2h7i_A          158 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI-----G--W  230 (269)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT-----C--C
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc-----c--c
Confidence            467999999999877653       79999999998875421100      0000    000000111221     0  1


Q ss_pred             CceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         212 QPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       212 ~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      .+...+|+|+++++++....  ..|+.+.+.+|..
T Consensus       231 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          231 NMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             CTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence            36788999999999997532  3688899887753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.84  E-value=4.9e-21  Score=160.46  Aligned_cols=201  Identities=14%  Similarity=0.028  Sum_probs=128.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH---HHh---cc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR---KAI---KY   87 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~---~~   87 (303)
                      |++++++++||||+|+||.+++++|++ |+.|++++|+...... ...   ..+++++.+|+.+.+...   +.+   .+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~-~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAA-LAE---IEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHH-HHT---STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHH-HHh---hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            356788999999999999999999987 8999999997543222 111   246899999998875422   122   25


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.....+++|+.++.++++++.    +.+ .++|++||...+..     ......|+.+
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-----~~~~~~Y~as  149 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP-----HPGNTIYAAS  149 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------CHHHHHH
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC-----CCCchHHHHH
Confidence            8999999996322        2334678999999888887763    334 58999999988763     2345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       ++++..++||.+.++......      .......       .. ..+++.+|+|++++.+++
T Consensus       150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------~~~~~~~-------~~-~~~~~p~dvA~~i~~l~~  215 (245)
T 3e9n_A          150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM------DSQGTNF-------RP-EIYIEPKEIANAIRFVID  215 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CC-GGGSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh------hhhhccc-------cc-ccCCCHHHHHHHHHHHHc
Confidence            99999888753       699999999999877432110      0011111       11 347899999999999998


Q ss_pred             CCCCCCcEEEEe
Q psy4233         229 DPDAAGKIYQAV  240 (303)
Q Consensus       229 ~~~~~g~~~~i~  240 (303)
                      .+. .+.++++.
T Consensus       216 ~~~-~~~~~~i~  226 (245)
T 3e9n_A          216 AGE-TTQITNVD  226 (245)
T ss_dssp             SCT-TEEEEEEE
T ss_pred             CCC-ccceeeeE
Confidence            654 46677764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=2.6e-20  Score=159.50  Aligned_cols=208  Identities=12%  Similarity=0.034  Sum_probs=148.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-------ch-hcCCCCceEEEecCCCCHHHHHHHh
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-------LR-LCGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-------~~-~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      |++++++++||||+|.||.+++++|+++|++|++++|+.....+.       .. ......++.++.+|++|.+++.+++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            456788999999999999999999999999999999986532110       00 1111246899999999999988877


Q ss_pred             c-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCC
Q psy4233          86 K-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        86 ~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                      +       ++|++||+||....        +.....+++|+.++.++++++...    +..+||++||...+...    .
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----~  160 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----W  160 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----G
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----C
Confidence            5       68999999996322        233467789999999999988654    45699999998765421    0


Q ss_pred             CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      .....|+.+|...+.+.+..       ++++..++||++...     .......   ....+       . ..+.+.+|+
T Consensus       161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-----~~~~~~~---~~~~~-------~-~r~~~pedv  224 (285)
T 3sc4_A          161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-----AAVQNLL---GGDEA-------M-ARSRKPEVY  224 (285)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-----HHHHHHH---TSCCC-------C-TTCBCTHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-----HHHHhhc---ccccc-------c-cCCCCHHHH
Confidence            23368999999999887653       699999999854321     1111111   11111       1 346789999


Q ss_pred             HHHHHHHhcCCC-CCCcEEEEeC
Q psy4233         220 AAAIVAACKDPD-AAGKIYQAVG  241 (303)
Q Consensus       220 a~~~~~~~~~~~-~~g~~~~i~~  241 (303)
                      |+++++++..+. ..|+.+.+.+
T Consensus       225 A~~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          225 ADAAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHhCCcccccceEEEEcC
Confidence            999999998653 3565555443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.84  E-value=7.1e-20  Score=152.98  Aligned_cols=216  Identities=13%  Similarity=0.008  Sum_probs=155.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++++|+++||||++.||.++++.|+++|.+|++.+|+.....+..+.. ....++..+.+|++|+++++++++      
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999754332221111 122568999999999998887664      


Q ss_pred             -ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       +.|++||+||...         .+.++..+++|+.++..+.+++-    +.+-.+||++||.......     .....|
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~-----~~~~~Y  157 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG-----FAGAPY  157 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----SSCHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----CCChHH
Confidence             4799999998521         12445789999999988888763    3455699999999876421     234679


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc----hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK----FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      +.+|.....+.+..       |+++..+.||.+-.|...    ........   ..+..+..       .-+...+|+|.
T Consensus       158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~---~~~~~~~~-------~R~g~pediA~  227 (254)
T 4fn4_A          158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRT---LTKLMSLS-------SRLAEPEDIAN  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHH---HHHHHTTC-------CCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHH---HHhcCCCC-------CCCcCHHHHHH
Confidence            99999999887763       789999999999776321    11111111   11111111       12578999999


Q ss_pred             HHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         222 AIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       222 ~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ++++++....  ..|+.+.+.+|-.
T Consensus       228 ~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          228 VIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhcCCcCCEEEeCCCcc
Confidence            9999997432  3799999988754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.83  E-value=4.8e-20  Score=155.78  Aligned_cols=213  Identities=17%  Similarity=0.041  Sum_probs=140.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc--------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK--------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--------   86 (303)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|++++.++++        
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999999743322111111 012468899999999988877653        


Q ss_pred             ccCEEEEccc--cC-------------ccccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCC
Q psy4233          87 YSNVVINLIG--RE-------------FATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYIS  147 (303)
Q Consensus        87 ~~D~vi~~a~--~~-------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~  147 (303)
                      .+|++||+||  ..             ..+.....+++|+.++.++.+++.    +.+..+||++||...+..      .
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------~  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------M  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC------C
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC------C
Confidence            3699999994  21             112234677888888877666553    455679999999988752      2


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      +...|+.+|...+.+.+..       ++++++++||.+..+.......-....  .........  ... ..+...+|+|
T Consensus       157 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~--~~~-~~~~~pe~va  231 (260)
T 2qq5_A          157 FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVL--QDPVLKQFK--SAF-SSAETTELSG  231 (260)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccccc--chhHHHHHH--hhh-ccCCCHHHHH
Confidence            3468999999999987653       799999999999877432110000000  000000000  000 1136899999


Q ss_pred             HHHHHHhcCCCC---CCcEEEE
Q psy4233         221 AAIVAACKDPDA---AGKIYQA  239 (303)
Q Consensus       221 ~~~~~~~~~~~~---~g~~~~i  239 (303)
                      +++++++..+..   .|+.+..
T Consensus       232 ~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          232 KCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHTCTTGGGGTTCEEEH
T ss_pred             HHHHHHhcCcccccccceeech
Confidence            999999976432   4555443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.83  E-value=2.3e-19  Score=149.27  Aligned_cols=204  Identities=12%  Similarity=0.091  Sum_probs=152.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      +|+|+||||++.||.++++.|+++|++|++.+|+.... +.+.  ...+++..+++|++|+++++++++       ++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~--~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-ADFA--KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHH--TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH--HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999974332 2222  223568999999999988887654       4899


Q ss_pred             EEEccccCc--------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          91 VINLIGREF--------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        91 vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      +||+||...        .+.++..+++|+.++..+.+++..    .+ .++|++||.......     .....|+.+|..
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~-----~~~~~Y~asKaa  152 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE-----PDSEAYASAKGG  152 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC-----TTCHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC-----CCCHHHHHHHHH
Confidence            999998632        234567899999999988887643    33 599999999876521     224679999999


Q ss_pred             HHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         159 GEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       159 ~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      ...+.+..      ++++..+.||.+-.+....  ....    ....+|+        .-+...+|+|+++++++.....
T Consensus       153 l~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~--~~~~----~~~~~Pl--------~R~g~pediA~~v~fL~s~~~i  218 (247)
T 3ged_A          153 IVALTHALAMSLGPDVLVNCIAPGWINVTEQQE--FTQE----DCAAIPA--------GKVGTPKDISNMVLFLCQQDFI  218 (247)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----CCHH----HHHTSTT--------SSCBCHHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH--HHHH----HHhcCCC--------CCCcCHHHHHHHHHHHHhCCCC
Confidence            99877763      6889999999987654321  1111    1223332        2367899999999999986656


Q ss_pred             CCcEEEEeCCcc
Q psy4233         233 AGKIYQAVGPKR  244 (303)
Q Consensus       233 ~g~~~~i~~~~~  244 (303)
                      .|+++.+.+|-.
T Consensus       219 TG~~i~VDGG~s  230 (247)
T 3ged_A          219 TGETIIVDGGMS  230 (247)
T ss_dssp             CSCEEEESTTGG
T ss_pred             CCCeEEECcCHH
Confidence            899999988754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.83  E-value=1.1e-19  Score=159.36  Aligned_cols=205  Identities=16%  Similarity=0.106  Sum_probs=146.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-------ch-hcCCCCceEEEecCCCCHHHHHHHhc-
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-------LR-LCGDLGQVLFQPYHPRNDDEIRKAIK-   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-------~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-   86 (303)
                      +++++++||||+|.||.+++++|+++|++|++++|+.....+.       .. ......++.++.+|++|.+++.++++ 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999986542110       00 11112468999999999999888775 


Q ss_pred             ------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                            ++|+|||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+...   +...
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---~~~~  199 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---WFKQ  199 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---GTSS
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---CCCC
Confidence                  68999999996321        233568999999999999988    44455699999998876521   1234


Q ss_pred             CCchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ...|+.+|...+.+.+..      ++.+..+.||.++..     ... ..   .....+       . ..+...+|+|++
T Consensus       200 ~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T-----~~~-~~---~~~~~~-------~-~r~~~pedvA~~  262 (346)
T 3kvo_A          200 HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT-----AAM-DM---LGGPGI-------E-SQCRKVDIIADA  262 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC-----HHH-HH---HCC--C-------G-GGCBCTHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc-----HHH-Hh---hccccc-------c-ccCCCHHHHHHH
Confidence            568999999999887653      688999999864422     111 11   111111       1 346789999999


Q ss_pred             HHHHhcCCC-CCCcEEEEeC
Q psy4233         223 IVAACKDPD-AAGKIYQAVG  241 (303)
Q Consensus       223 ~~~~~~~~~-~~g~~~~i~~  241 (303)
                      ++.++.... ..|+.+ +.+
T Consensus       263 v~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          263 AYSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHHhcCCCCCceEE-ECC
Confidence            999998622 267655 544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.83  E-value=3.2e-20  Score=159.07  Aligned_cols=194  Identities=12%  Similarity=0.024  Sum_probs=140.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|+||||+|+||.+++++|+++|++|++++|+.....+.....  ....+++++.+|++|.+++.++++      
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999999754322111110  011368999999999988887765      


Q ss_pred             -ccCEEEEc-cccCcc-------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINL-IGREFA-------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~-a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|+|||+ ++....       ......+++|+.++.++++++...   +..+||++||...+..     ..+...|+.
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a  179 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----YPMVAAYSA  179 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----CTTCHHHHH
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----CCCccHHHH
Confidence             68999999 564221       223467899999999999887542   2359999999987652     134568999


Q ss_pred             HHHHHHHHHHh---------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLR---------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+.         .++++++++||.+..+...      ..   ...        ... ..+++.+|+|++++.
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~------~~---~~~--------~~~-~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM------KA---VSG--------IVH-MQAAPKEECALEIIK  241 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH------HH---SCG--------GGG-GGCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH------Hh---ccc--------ccc-CCCCCHHHHHHHHHH
Confidence            99999887654         2688999999988754210      00   000        111 346899999999999


Q ss_pred             HhcCCC
Q psy4233         226 ACKDPD  231 (303)
Q Consensus       226 ~~~~~~  231 (303)
                      ++..+.
T Consensus       242 ~~~~~~  247 (286)
T 1xu9_A          242 GGALRQ  247 (286)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            998643

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.83  E-value=5.1e-20  Score=153.96  Aligned_cols=216  Identities=13%  Similarity=0.063  Sum_probs=155.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +.++|+++||||++.||.++++.|+++|.+|++.+|+.....+.... .....++..+.+|++|+++++++++       
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            56789999999999999999999999999999999975433222111 1122468999999999998887664       


Q ss_pred             ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 ~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                      ++|++||+||...        .+.++..+++|+.++..+.+++-     +.+-.+||++||......     ......|+
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-----~~~~~~Y~  160 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-----RPTVAPYT  160 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-----CTTCHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-----CCCchhHH
Confidence            3799999999632        23456789999999988888652     223459999999988652     12346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|.....+.+..       |+++..+.||.+..|.......-..........+|+        .-+...+|+|.+++++
T Consensus       161 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--------~R~g~pediA~~v~fL  232 (255)
T 4g81_D          161 AAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS--------QRWGRPEELIGTAIFL  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTT--------CSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999887763       789999999999866432110000111111223332        2257889999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+.+.+.+|-
T Consensus       233 ~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          233 SSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTG
T ss_pred             hCchhCCCcCCEEEECCCe
Confidence            9643  3379999998774

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.83  E-value=2.8e-20  Score=156.00  Aligned_cols=203  Identities=12%  Similarity=0.040  Sum_probs=144.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCC--CCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHP--RNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl--~d~~~~~~~~~---   86 (303)
                      ..+++++++||||+|+||.+++++|+++|++|++++|+.....+.....  ...++..++.+|+  +|.+++.++++   
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            3467889999999999999999999999999999999754332211111  1124577777777  88888777654   


Q ss_pred             ----ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                          ++|++||+||....         +.....+++|+.++.++++++    ++.+..++|++||...+..     ....
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~  164 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-----RANW  164 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-----CTTC
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-----CCCc
Confidence                58999999996321         233568899999999999988    4455679999999877653     2344


Q ss_pred             CchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ..|+.+|...+.+.+..        ++++..++||.+..+.      ....   ...        ... ..+...+|+|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~------~~~~---~~~--------~~~-~~~~~p~dva~  226 (247)
T 3i1j_A          165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM------RAQA---YPD--------ENP-LNNPAPEDIMP  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH------HHHH---STT--------SCG-GGSCCGGGGTH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc------chhc---ccc--------cCc-cCCCCHHHHHH
Confidence            68999999999887652        4678889998876431      1110   000        111 24578899999


Q ss_pred             HHHHHhcCC--CCCCcEEEE
Q psy4233         222 AIVAACKDP--DAAGKIYQA  239 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i  239 (303)
                      ++++++..+  ...|+.+++
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            999999743  235766654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.83  E-value=4.1e-19  Score=149.64  Aligned_cols=217  Identities=11%  Similarity=0.054  Sum_probs=152.8

Q ss_pred             ccCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          14 SSFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++++|+++||||+|  .||.++++.|.++|++|++..|+.....+..+..  ....++..+++|++|++++.++++   
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            567899999999987  8999999999999999999999754332221211  123468999999999988877654   


Q ss_pred             ----ccCEEEEccccCcc---------c---cchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA---------T---KNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISG  148 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~---------~---~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~  148 (303)
                          ++|++||+||....         .   .....+++|+.+...+.+++...-  -.+||++||......     ...
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-----~~~  156 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-----VQN  156 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-----CTT
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-----ccc
Confidence                48999999985321         1   112456788888877777775432  248999999877642     133


Q ss_pred             CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      ...|+.+|...+.+.+..       |+++..+.||.+-.|............+.....+|+        .-+...+|+|+
T Consensus       157 ~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--------~R~g~peevA~  228 (256)
T 4fs3_A          157 YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPL--------KRNVDQVEVGK  228 (256)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT--------SSCCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCC--------CCCcCHHHHHH
Confidence            468999999999877663       789999999998776432221112222212223332        23578999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ++++++...  ...|+++.+.+|-
T Consensus       229 ~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          229 TAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCccCCEEEECcCH
Confidence            999999743  2378999998774

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.82  E-value=2.1e-19  Score=153.03  Aligned_cols=202  Identities=13%  Similarity=0.086  Sum_probs=144.2

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---ch-----hcCCCCceEEEecCCCCHHHHHHHh
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LR-----LCGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      +++++++++||||+|.||.+++++|+++|++|++++|+.....+.   +.     ......++.++.+|++|.+++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            456789999999999999999999999999999999986432110   00     0011246899999999999888776


Q ss_pred             c-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCC
Q psy4233          86 K-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYI  146 (303)
Q Consensus        86 ~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~  146 (303)
                      +       ++|++||+||....        +.....+++|+.++.++++++..    .+..+||++||...+....   .
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~  158 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---W  158 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---H
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---C
Confidence            5       58999999996322        23346788999999999998743    4556999999987765200   1


Q ss_pred             CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceee-CCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYG-SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                      .....|+.+|...+.+.+..       ++++..+.||.+.. +..       ...    ...       .. ..+.+.+|
T Consensus       159 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-------~~~----~~~-------~~-~~~~~ped  219 (274)
T 3e03_A          159 GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-------NML----PGV-------DA-AACRRPEI  219 (274)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CC-------CG-GGSBCTHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-------hhc----ccc-------cc-cccCCHHH
Confidence            23457999999999887653       69999999985442 211       000    011       11 23678999


Q ss_pred             HHHHHHHHhcCCCC--CCcEE
Q psy4233         219 VAAAIVAACKDPDA--AGKIY  237 (303)
Q Consensus       219 va~~~~~~~~~~~~--~g~~~  237 (303)
                      +|++++.++..+..  .|+.+
T Consensus       220 vA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          220 MADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHHHhCccccccCCeEE
Confidence            99999999975432  56655

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.82  E-value=4.9e-20  Score=155.65  Aligned_cols=211  Identities=13%  Similarity=0.049  Sum_probs=143.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHh---CCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGK---QGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      +++++++||||+|+||.+++++|++   +|++|++++|+.....+.....   ....++.++.+|++|++++.++++   
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999   8999999999754322211111   012468999999999998887654   


Q ss_pred             ------ccC--EEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHhc------CCceEEEEecCccCCCC
Q psy4233          87 ------YSN--VVINLIGREFA-----------TKNFTIADANVEIPARLARLSKEM------GVEKFIHISALNADPNP  141 (303)
Q Consensus        87 ------~~D--~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~Ss~~~~~~~  141 (303)
                            .+|  ++||+||....           +.....+++|+.++.++++++...      +..+||++||...+.. 
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  162 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP-  162 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC-
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC-
Confidence                  358  99999996321           233468899999999999988643      2357999999988752 


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-----CCCEEEEeecceeeCCCchhhH---HHHHHHhhhcceeeecCCCceeeCc
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-----FPEATIFRPSDMYGSGDKFLRY---YGHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                          ......|+.+|...+.+.+..     ++++..+.||.+-.+.......   -...........|       . ..+
T Consensus       163 ----~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~  230 (259)
T 1oaa_A          163 ----YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS-------D-GAL  230 (259)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH-------T-TCS
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhh-------c-CCc
Confidence                234568999999999988764     3677778888775432110000   0000000011111       1 246


Q ss_pred             eeHHHHHHHHHHHhcCC-CCCCcEEEE
Q psy4233         214 VYVGDVAAAIVAACKDP-DAAGKIYQA  239 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~-~~~g~~~~i  239 (303)
                      .+.+|+|+++++++... ...|+.+++
T Consensus       231 ~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          231 VDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             BCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCHHHHHHHHHHHHhhccccCCcEEec
Confidence            89999999999998742 224655544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.82  E-value=3.2e-19  Score=149.70  Aligned_cols=218  Identities=12%  Similarity=0.075  Sum_probs=154.8

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+++||||++.||.++++.|+++|.+|++.+|+.+.............++.++.+|++|++++.++++       
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999999999865432111111223568999999999988877654       


Q ss_pred             ccCEEEEccccCc-------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 YSNVVINLIGREF-------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 ~~D~vi~~a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +.|++||+||...       .+.+...+++|+.++..+.+++.    +.+ .+||++||.......     .....|+.+
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~-----~~~~~Y~as  156 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQ-----GNTSGYCAS  156 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCC-----SSCHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCC-----CCchHHHHH
Confidence            4899999999621       23445788999999988888763    333 589999999875321     234679999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH---HHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..       |+++..+.||.+..|.... .....   .........+|+   +    .-+...+|+|.+++
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g----~R~g~peeiA~~v~  229 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G----RRFTTPDEIADTAV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T----TSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C----CCCcCHHHHHHHHH
Confidence            99999887763       7999999999998764321 11000   001111122332   1    13678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++...  ...|+.+.+.+|-+
T Consensus       230 fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          230 FLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCccCCeEEECCCcc
Confidence            999743  23799999988754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.81  E-value=1.1e-18  Score=146.77  Aligned_cols=209  Identities=13%  Similarity=0.099  Sum_probs=148.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++++|+++||||++.||.++++.|+++|++|++.+|+..+..         .+...+++|++|++++..+++       
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------PEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------CTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3456889999999999999999999999999999999754322         234578999999988877654       


Q ss_pred             ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      +.|++||+||....          +.++..+++|+.++..+.+++-    +.+-.+||++||.......   | .....|
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~---~-~~~~~Y  153 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL---P-ESTTAY  153 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---T-TTCHHH
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC---C-CccHHH
Confidence            47999999985211          2345688999999988877663    4455699999998775421   0 123579


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHH-----------HHHHHhhhcceeeecCCCceeeCc
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYY-----------GHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      +.+|...+.+.+..       |+++..+.||.+-.|.... ....           ..........+|+        .-+
T Consensus       154 ~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~  225 (261)
T 4h15_A          154 AAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL--------GRP  225 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT--------SSC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC--------CCC
Confidence            99999999887763       7899999999887542210 0000           0111101122222        236


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ...+|+|+++++++...  ...|+.+.+.+|-
T Consensus       226 g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          226 AKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            88999999999999643  2379999998774

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.81  E-value=3.2e-19  Score=155.62  Aligned_cols=160  Identities=15%  Similarity=0.064  Sum_probs=123.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-------CCCCceEEEecCCCCHHHHHHHhcc---
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-------GDLGQVLFQPYHPRNDDEIRKAIKY---   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~---   87 (303)
                      +++|+||||+|+||.+++++|+++|++|+++.|+...........       ....+++++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            578999999999999999999999999988887643322111110       0124689999999999999998875   


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        +|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||...+...     .....|+
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----~~~~~Y~  156 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----PFNDVYC  156 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----TTCHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----CCChHHH
Confidence              8999999986321        234568899999999999985    44566799999998876421     2346899


Q ss_pred             HHHHHHHHHHHh-------hCCCEEEEeecceeeCC
Q psy4233         154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSG  182 (303)
Q Consensus       154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~  182 (303)
                      .+|..++.+.+.       .++++++++||.+..+.
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            999999988765       37899999999998764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.81  E-value=3.4e-19  Score=147.61  Aligned_cols=215  Identities=14%  Similarity=0.065  Sum_probs=155.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~   90 (303)
                      .+.++|+++||||++.||.++++.|.++|.+|++.+|+..+. .+.+..  ...++..+.+|++|++++.+.++.  .|+
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~--~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK--DGGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH--TTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH--hCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            356799999999999999999999999999999999975432 122222  225689999999999988877654  899


Q ss_pred             EEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +||+||...        .+.++..+++|+.++..+.+++-    +.+ -.+||++||.......     .....|+.+|.
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-----~~~~~Y~asKa  157 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-----IRVPSYTAAKH  157 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----SSCHHHHHHHH
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-----CCChHHHHHHH
Confidence            999999622        23456789999999998888653    233 3599999998876421     23357999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      .+..+.+..       |+++..+.||.+-.|.......-....+.....+|+        .-+-..+|+|.++++++...
T Consensus       158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--------gR~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA--------GRWGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTT--------SSCBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCC--------CCCcCHHHHHHHHHHHhCch
Confidence            999887763       789999999999766432111001111111223332        23578899999999999753


Q ss_pred             C--CCCcEEEEeCCc
Q psy4233         231 D--AAGKIYQAVGPK  243 (303)
Q Consensus       231 ~--~~g~~~~i~~~~  243 (303)
                      .  ..|+.+.+.+|-
T Consensus       230 a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          230 ADYVHGAILNVDGGW  244 (247)
T ss_dssp             GTTCCSCEEEESTTG
T ss_pred             hcCCcCCeEEECccc
Confidence            2  378999998774

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.81  E-value=1.4e-18  Score=145.45  Aligned_cols=207  Identities=10%  Similarity=0.006  Sum_probs=140.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-e--cCCCcccccchhcCCCCceEEEecCCCCHHHHH-HHh---cccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIP-Y--RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR-KAI---KYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~--R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~---~~~D~   90 (303)
                      +++++||||+|+||.+++++|+++|++|+++ +  |+.....+.....   .+.++.  |..+.+.+. ++.   .++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999 6  8643222111111   122222  554443332 222   35899


Q ss_pred             EEEccccCcc-----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          91 VINLIGREFA-----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        91 vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +||+||....           +..+..+++|+.++.++++++.    +.+..+||++||...+..     ......|+.+
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as  150 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-----LAYNPLYGPA  150 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----CTTCTTHHHH
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-----CCCchHHHHH
Confidence            9999996432           2234688999999999988774    445679999999888653     1345789999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCC---chhhHHHHHHHhhhc-ceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGD---KFLRYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..       +++++.++||.+..+..   ..... ......... ..|.        ..+.+.+|+|++++
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~p~--------~r~~~pe~vA~~v~  221 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-NPELRERVDRDVPL--------GRLGRPDEMGALIT  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-CHHHHHHHHHHCTT--------CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-hHHHHHHHhcCCCC--------CCCcCHHHHHHHHH
Confidence            99999887653       68999999999987753   21100 000000111 1221        23689999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCc
Q psy4233         225 AACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +++....  ..|+.+.+.+|.
T Consensus       222 ~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          222 FLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHTTTTGGGTTCEEEESTTC
T ss_pred             HHcCccccCccCCEEEeCCCC
Confidence            9997543  368888887763

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.80  E-value=5.7e-19  Score=152.84  Aligned_cols=191  Identities=12%  Similarity=0.051  Sum_probs=136.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCH-HHHHHHhc-----
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRND-DEIRKAIK-----   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~-~~~~~~~~-----   86 (303)
                      +.++++|+||||+|+||.+++++|+++|++|++++|+.....+.....  ....+++++.+|++|. +++..+++     
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999854332222211  1124699999999998 77766554     


Q ss_pred             --ccCEEEEccccCcc--------------------------------------ccchhhhhhhcchHHHHHHHHH----
Q psy4233          87 --YSNVVINLIGREFA--------------------------------------TKNFTIADANVEIPARLARLSK----  122 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------------------------------------~~~~~~~~~n~~~~~~l~~~~~----  122 (303)
                        ++|+|||+||....                                      +..+..+++|+.++.++++++.    
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence              68999999997421                                      1123468999999888888774    


Q ss_pred             hcCCceEEEEecCccCCCCC-------------------------------------CC-CCCCCCchhHHHHHHHHHHH
Q psy4233         123 EMGVEKFIHISALNADPNPP-------------------------------------TY-YISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus       123 ~~~~~~~v~~Ss~~~~~~~~-------------------------------------~~-~~~~~~~y~~~K~~~e~~~~  164 (303)
                      +.+..+||++||...+....                                     .. .......|+.+|+..+.+.+
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            34556999999987643210                                     00 01233579999999999887


Q ss_pred             hh-----CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         165 RE-----FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       165 ~~-----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..     ++.+..++||.+..+...              .           ......++.|+.++.++..+
T Consensus       249 ~la~e~~~i~v~~v~PG~v~T~~~~--------------~-----------~~~~~~~~~a~~~~~~~~~~  294 (311)
T 3o26_A          249 VLANKIPKFQVNCVCPGLVKTEMNY--------------G-----------IGNYTAEEGAEHVVRIALFP  294 (311)
T ss_dssp             HHHHHCTTSEEEEECCCSBCSGGGT--------------T-----------CCSBCHHHHHHHHHHHHTCC
T ss_pred             HHHhhcCCceEEEecCCceecCCcC--------------C-----------CCCCCHHHHHHHHHHHHhCC
Confidence            64     578888999988754211              0           12357889999999988654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.80  E-value=1.1e-18  Score=147.13  Aligned_cols=213  Identities=14%  Similarity=0.042  Sum_probs=153.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|.+|++.+|+.+...+.....+  .++..+.+|++|+++++++++       ++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999997544333323222  468889999999988887664       37


Q ss_pred             CEEEEccccCc--------cccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          89 NVVINLIGREF--------ATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        89 D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++||+||...        .+.++..+++|+.++..+.+++...  .-.++|++||.......     .....|+.+|..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~-----~~~~~Y~asKaa  179 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT-----PAFSVYAASKAA  179 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-----TTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-----CCchHHHHHHHH
Confidence            99999998622        2355679999999999999988542  11389999998775421     234689999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchh-----hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFL-----RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +..+.+..       |+++..+.||.+..|.....     .............+|+        .-+...+|+|.+++++
T Consensus       180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~g~peeiA~~v~FL  251 (273)
T 4fgs_A          180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM--------GRVGRAEEVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            99888763       68999999999876642110     0001111112223332        2267899999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+.+.+.+|.
T Consensus       252 aSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          252 ASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCchhcCccCCeEeECcCh
Confidence            9743  2379999998774

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.80  E-value=1.2e-18  Score=159.43  Aligned_cols=212  Identities=13%  Similarity=0.072  Sum_probs=150.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCccc--ccc-h-hcCCCCceEEEecCCCCHHHHHHHhccc---
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDV--RDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKYS---   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~--~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   88 (303)
                      .+++||||||+|+||.++++.|+++|++ |++++|+.....  +.+ . +.....+++++.+|++|.+++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            4679999999999999999999999985 899999754211  111 1 1111246899999999999999988764   


Q ss_pred             ---CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc-CCCCCCCCCCCCCchhHHH
Q psy4233          89 ---NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA-DPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 ---D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K  156 (303)
                         |+|||+||....        ......+++|+.++.++.++++..+.++||++||... ++.      .....|+.+|
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~------~g~~~Yaaak  378 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA------PGLGGYAPGN  378 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC------TTCTTTHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC------CCCHHHHHHH
Confidence               999999996432        2234577889999999999999988899999999755 442      3357899999


Q ss_pred             HHHHHHHHh---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         157 YQGEKEVLR---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       157 ~~~e~~~~~---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      ...+.+.+.   .++++++++||.+.+++......           ...+.  ... ..+++.+|+++++..++..+...
T Consensus       379 a~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~-----------~~~~~--~~g-~~~i~~e~~a~~l~~~l~~~~~~  444 (486)
T 2fr1_A          379 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-----------ADRFR--RHG-VIEMPPETACRALQNALDRAEVC  444 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCBC-----------------------CT--TTT-EECBCHHHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhH-----------HHHHH--hcC-CCCCCHHHHHHHHHHHHhCCCCe
Confidence            999977654   48999999999998764221000           00000  111 35799999999999999865431


Q ss_pred             CcEEEEeCCcccCHHHHHHHH
Q psy4233         234 GKIYQAVGPKRYLLSELLDWF  254 (303)
Q Consensus       234 g~~~~i~~~~~~s~~e~~~~i  254 (303)
                         +.+.   .+.|..+...+
T Consensus       445 ---~~v~---~~d~~~~~~~~  459 (486)
T 2fr1_A          445 ---PIVI---DVRWDRFLLAY  459 (486)
T ss_dssp             ---CEEC---EECHHHHHHHH
T ss_pred             ---EEEE---eCCHHHHhhhh
Confidence               2222   25676665544

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.80  E-value=8.2e-19  Score=159.11  Aligned_cols=212  Identities=16%  Similarity=0.084  Sum_probs=149.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c-
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y-   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~-   87 (303)
                      +++++++||||+|.||.++++.|+++|++|++++|+....  .+.......+++++.+|++|.+++.++++       + 
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~--~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAE--DLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHH--HHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHH--HHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998864221  11110001246789999999988887664       3 


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|+|||+||....        +.....+++|+.++.++.+++...    +..+||++||...+...     .....|+.+
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~-----~g~~~Yaas  363 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN-----RGQTNYATT  363 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC-----TTCHHHHHH
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC-----CCCHHHHHH
Confidence            8999999997432        233467899999999999999765    55699999998765321     335689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      |...+.+.+..       +++++.+.||.+..+............  .....+       . ..+...+|+|+++++++.
T Consensus       364 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~-------l-~r~g~pedvA~~v~fL~s  433 (454)
T 3u0b_A          364 KAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREV--GRRLNS-------L-FQGGQPVDVAELIAYFAS  433 (454)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHH--HHHSBT-------T-SSCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHH--HHhhcc-------c-cCCCCHHHHHHHHHHHhC
Confidence            99877766542       799999999999876432111100000  111111       1 235789999999999987


Q ss_pred             CC--CCCCcEEEEeCCcc
Q psy4233         229 DP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       229 ~~--~~~g~~~~i~~~~~  244 (303)
                      ..  ...|++++++++..
T Consensus       434 ~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          434 PASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             GGGTTCCSCEEEESSSBS
T ss_pred             CccCCCCCcEEEECCccc
Confidence            43  34789999987754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.78  E-value=6.1e-18  Score=155.42  Aligned_cols=214  Identities=16%  Similarity=0.120  Sum_probs=153.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccc--ccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDV--RDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY--SN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~--~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D   89 (303)
                      .+++||||||+|+||.++++.|+++|+ .|++++|+.....  +.+ . +.....+++++.+|++|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            367999999999999999999999998 5888888753211  111 1 111124689999999999999999976  99


Q ss_pred             EEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHHH
Q psy4233          90 VVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM-GVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        90 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      +|||+||.....        .....+++|+.++.++.+++... +.++||++||... ++.      .....|+.+|...
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~------~g~~~YaaaKa~l  411 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN------AGQGAYAAANAAL  411 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC------TTBHHHHHHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC------CCCHHHHHHHHHH
Confidence            999999974321        23457789999999999999877 7789999999855 442      2346899999999


Q ss_pred             HHHHHh---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE
Q psy4233         160 EKEVLR---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI  236 (303)
Q Consensus       160 e~~~~~---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~  236 (303)
                      +.+.+.   .++++++++||.+.+.+.... .....+  .          ... ..+++.+|+++++..++..+..   .
T Consensus       412 d~la~~~~~~gi~v~sv~pG~~~~tgm~~~-~~~~~~--~----------~~g-~~~l~~e~~a~~l~~al~~~~~---~  474 (511)
T 2z5l_A          412 DALAERRRAAGLPATSVAWGLWGGGGMAAG-AGEESL--S----------RRG-LRAMDPDAAVDALLGAMGRNDV---C  474 (511)
T ss_dssp             HHHHHHHHTTTCCCEEEEECCBCSTTCCCC-HHHHHH--H----------HHT-BCCBCHHHHHHHHHHHHHHTCS---E
T ss_pred             HHHHHHHHHcCCcEEEEECCcccCCccccc-ccHHHH--H----------hcC-CCCCCHHHHHHHHHHHHhCCCC---E
Confidence            988775   489999999998843222111 111111  1          011 3579999999999999986432   2


Q ss_pred             EEEeCCcccCHHHHHHHHHH
Q psy4233         237 YQAVGPKRYLLSELLDWFHV  256 (303)
Q Consensus       237 ~~i~~~~~~s~~e~~~~i~~  256 (303)
                      +.+.   .+.|..+...+..
T Consensus       475 v~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          475 VTVV---DVDWERFAPATNA  491 (511)
T ss_dssp             EEEC---CBCHHHHHHHHHH
T ss_pred             EEEE---eCCHHHHHhhhcc
Confidence            3332   2567777665543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.77  E-value=4.5e-17  Score=140.19  Aligned_cols=218  Identities=10%  Similarity=0.045  Sum_probs=141.9

Q ss_pred             ccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCC----------CcccccchhcCCC---CceEEEecC----
Q psy4233          14 SSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGN----------FYDVRDLRLCGDL---GQVLFQPYH----   74 (303)
Q Consensus        14 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~----------~~~~~~~~~~~~~---~~~~~~~~D----   74 (303)
                      +++++++++||||+  |+||.+++++|+++|++|++++|++          ....+........   .....+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            45678899999999  9999999999999999999987642          1111111110000   012333433    


Q ss_pred             ----CC----C--------HHHHHHHh-------cccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHH
Q psy4233          75 ----PR----N--------DDEIRKAI-------KYSNVVINLIGREF----------ATKNFTIADANVEIPARLARLS  121 (303)
Q Consensus        75 ----l~----d--------~~~~~~~~-------~~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~  121 (303)
                          +.    |        .+++.+++       .++|++||+||...          .+..+..+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                22    1        22333332       35899999998521          1233468899999999999999


Q ss_pred             Hhc--CCceEEEEecCccCCCCCCCCCCCC-CchhHHHHHHHHHHHh--------hCCCEEEEeecceeeCCCchhhHHH
Q psy4233         122 KEM--GVEKFIHISALNADPNPPTYYISGG-SQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDKFLRYYG  190 (303)
Q Consensus       122 ~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~-~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~~~  190 (303)
                      ...  .-.+||++||...+...     ... ..|+.+|...+.+.+.        .++++..++||.+.+|.........
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~  238 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERII-----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC-----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHhccCceEEEEeccccccCC-----CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccH
Confidence            753  11589999998775421     122 4799999999886653        4799999999999988643211111


Q ss_pred             HHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ..........|+        ..+.+.+|+|+++++++...  ...|+.+++.++..
T Consensus       239 ~~~~~~~~~~p~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          239 TMIEYSYNNAPI--------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHHSSS--------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhccCCC--------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            111111112221        23578999999999998742  23688999988753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.77  E-value=5.2e-20  Score=160.59  Aligned_cols=163  Identities=12%  Similarity=0.052  Sum_probs=118.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEeecCCC-cccccc--hhcCCCCceEEEecCCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-------QIIIPYRGNF-YDVRDL--RLCGDLGQVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~-~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      +|||+||||+||||++++..|+++|+       +|+++++... ......  .+. + ..+.++ +|+.+.+++.+.+++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~-~-~~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE-D-CAFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH-T-TTCTTE-EEEEEESCHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh-c-cccccc-CCeEeccChHHHhCC
Confidence            57999999999999999999999986       8999988531 111110  110 0 112223 566666667788899


Q ss_pred             cCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEecCcc---CCCCCCC-CCCCCCchhHHHHHH
Q psy4233          88 SNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG-VE-KFIHISALNA---DPNPPTY-YISGGSQFYRTKYQG  159 (303)
Q Consensus        88 ~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss~~~---~~~~~~~-~~~~~~~y~~~K~~~  159 (303)
                      +|+|||+||...  ...+.++++.|+.+++++++++++.+ ++ +++++|+...   +...+.. +..|.++|+.+|...
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~  160 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH  160 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHH
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHH
Confidence            999999999743  24556799999999999999999985 65 7887776541   1001111 234567899999999


Q ss_pred             HHHHHh----hCCCEEEEeecceeeCCC
Q psy4233         160 EKEVLR----EFPEATIFRPSDMYGSGD  183 (303)
Q Consensus       160 e~~~~~----~~~~~~ilrp~~~~G~~~  183 (303)
                      |++...    .+++.+++|++++|||..
T Consensus       161 er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          161 NRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             HHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            987654    489999999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.76  E-value=3.8e-18  Score=148.15  Aligned_cols=201  Identities=14%  Similarity=0.110  Sum_probs=138.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC--------Ccccccc-hhcCCCCceEEEecCCCCHHHHHHH
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN--------FYDVRDL-RLCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~--------~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      +.+++++++||||+|+||.+++++|+++|++|++.+|..        ....+.. ..... ... .+.+|+.|.+++.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~-~~~-~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGG-KAVANYDSVEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTC-EEEEECCCGGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh-hCC-eEEEeCCCHHHHHHH
Confidence            346788999999999999999999999999999976531        1111111 11000 011 235799998766554


Q ss_pred             h-------cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCcc-CCCCCCC
Q psy4233          85 I-------KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNA-DPNPPTY  144 (303)
Q Consensus        85 ~-------~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~-~~~~~~~  144 (303)
                      +       .++|+|||+||....        +..+..+++|+.++.++++++    ++.+..+||++||... ++.    
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~----  158 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----  158 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC----
Confidence            3       358999999996322        233568899999998888887    4456679999999754 442    


Q ss_pred             CCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233         145 YISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG  217 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  217 (303)
                        .....|+.+|...+.+.+..       ++.++.++||.+ .+....  .           .+     ... ..+++.+
T Consensus       159 --~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~--~-----------~~-----~~~-~~~~~p~  216 (319)
T 1gz6_A          159 --FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET--V-----------MP-----EDL-VEALKPE  216 (319)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG--G-----------SC-----HHH-HHHSCGG
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc--c-----------CC-----hhh-hccCCHH
Confidence              23468999999999877653       789999999986 331110  0           00     011 2357889


Q ss_pred             HHHHHHHHHhcCCC-CCCcEEEEeCC
Q psy4233         218 DVAAAIVAACKDPD-AAGKIYQAVGP  242 (303)
Q Consensus       218 Dva~~~~~~~~~~~-~~g~~~~i~~~  242 (303)
                      |+|.++++++..+. ..|+.|++.++
T Consensus       217 dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          217 YVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHhCchhhcCCCEEEECCC
Confidence            99999999987542 36888887665

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.72  E-value=1.1e-16  Score=146.25  Aligned_cols=196  Identities=13%  Similarity=0.058  Sum_probs=143.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccc--ccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDV--RDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~--~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      ++++|||||+|.||.++++.|+++|+ .|+++.|+.....  +.+ . +.....++.++.+|++|.+++.++++.     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            47999999999999999999999997 7888888643221  111 1 111124699999999999999998864     


Q ss_pred             -cCEEEEccccC-cc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          88 -SNVVINLIGRE-FA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        88 -~D~vi~~a~~~-~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                       +|+|||+||.. ..        +.....+++|+.++.++.+++...+..+||++||.......     .....|+.+|.
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~-----~g~~~YaAaKa  393 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS-----GGQPGYAAANA  393 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC-----TTCHHHHHHHH
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC-----CCcHHHHHHHH
Confidence             79999999975 22        12346889999999999999999888899999997664321     33468999999


Q ss_pred             HHHHHHHh---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233         158 QGEKEVLR---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD  231 (303)
Q Consensus       158 ~~e~~~~~---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  231 (303)
                      ..+.+.+.   .|++++.+.||.+.+++..........+  ....           ...+..++.++++..++..+.
T Consensus       394 ~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l--~~~g-----------~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          394 YLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRL--VRQG-----------VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHH--HHTT-----------EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHH--HhcC-----------CCCCCHHHHHHHHHHHHcCCC
Confidence            99987765   3899999999988766543211111111  1111           234788999999999998654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.70  E-value=3.3e-16  Score=135.86  Aligned_cols=217  Identities=11%  Similarity=0.060  Sum_probs=137.6

Q ss_pred             cCCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCC----------cccccchhcCCCC---ceEEEecCC----
Q psy4233          15 SFNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNF----------YDVRDLRLCGDLG---QVLFQPYHP----   75 (303)
Q Consensus        15 ~~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~----------~~~~~~~~~~~~~---~~~~~~~Dl----   75 (303)
                      ++++++++||||  +|.||.+++++|+++|++|++++|++.          ...+.........   .++++.+|+    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            356789999999  899999999999999999999987420          0111111110000   124444443    


Q ss_pred             --------CC--------HHHHHHHh-------cccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHHH
Q psy4233          76 --------RN--------DDEIRKAI-------KYSNVVINLIGREF----------ATKNFTIADANVEIPARLARLSK  122 (303)
Q Consensus        76 --------~d--------~~~~~~~~-------~~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~~  122 (303)
                              +|        .+++.+++       .++|++||+||...          .+.....+++|+.++.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                    21        22333333       35899999998531          12234678999999999999986


Q ss_pred             hc--CCceEEEEecCccCCCCCCCCCCCC-CchhHHHHHHHHHHHh--------hCCCEEEEeecceeeCCCchhh----
Q psy4233         123 EM--GVEKFIHISALNADPNPPTYYISGG-SQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDKFLR----  187 (303)
Q Consensus       123 ~~--~~~~~v~~Ss~~~~~~~~~~~~~~~-~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~~~~----  187 (303)
                      ..  .-.+||++||...+...     ... ..|+.+|...+.+.+.        .++++..++||.+..+......    
T Consensus       166 ~~m~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~  240 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAERVV-----PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE  240 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTSCC-----TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred             HHHhcCCEEEEEecccccccC-----CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence            43  11589999998776421     122 4799999999887653        3789999999998754211000    


Q ss_pred             --HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         188 --YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       188 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                        .............|+        ..+...+|+|+++++++...  ...|+.+.+.+|..
T Consensus       241 ~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPL--------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             SCHHHHHHHHHHHHSSS--------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             chhHHHHHHHHhccCCC--------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence              000110000111221        23578999999999999742  33788999888753

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.68  E-value=5.5e-16  Score=134.75  Aligned_cols=217  Identities=9%  Similarity=0.021  Sum_probs=121.3

Q ss_pred             cCCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCC----------Ccccccc------------hhcCCCC----
Q psy4233          15 SFNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGN----------FYDVRDL------------RLCGDLG----   66 (303)
Q Consensus        15 ~~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~----------~~~~~~~------------~~~~~~~----   66 (303)
                      .+++++++||||  +|.||.+++++|+++|++|++++|++          ....+..            .......    
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            356789999999  89999999999999999999998642          1111100            0000000    


Q ss_pred             ceEEEecCC--CC------------------HHHHHHHh-------cccCEEEEccccCc----------cccchhhhhh
Q psy4233          67 QVLFQPYHP--RN------------------DDEIRKAI-------KYSNVVINLIGREF----------ATKNFTIADA  109 (303)
Q Consensus        67 ~~~~~~~Dl--~d------------------~~~~~~~~-------~~~D~vi~~a~~~~----------~~~~~~~~~~  109 (303)
                      ..+++.+|+  .+                  .+++.+++       .++|++||+||...          .+.....+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            124444442  21                  12333333       35899999998531          1223467899


Q ss_pred             hcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC-CchhHHHHHHHHHHHh--------hCCCEEEEeecce
Q psy4233         110 NVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG-SQFYRTKYQGEKEVLR--------EFPEATIFRPSDM  178 (303)
Q Consensus       110 n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~-~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~  178 (303)
                      |+.++.++++++...  .-.+||++||...+...     ... ..|+.+|...+.+.+.        .++++..++||.+
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI-----PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEecccccccc-----CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999998753  11589999998775421     122 4799999888876643        4799999999999


Q ss_pred             eeCCCchhhH--HHHHHHh----hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         179 YGSGDKFLRY--YGHMWRH----VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       179 ~G~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ..+.......  -......    .....|       . ..+...+|+|+++++++...  ...|+.+.+.+|..
T Consensus       241 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          241 KSRAASAIGKAGDKTFIDLAIDYSEANAP-------L-QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             C---------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             cChhhhhcccccchhhHHHHHHHHhccCC-------C-CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            8764221100  0000000    000111       1 23678999999999999742  34788999988754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.67  E-value=9.1e-16  Score=141.52  Aligned_cols=214  Identities=13%  Similarity=0.034  Sum_probs=148.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEe-ecCCCc------------cccc-ch-hcCCCCceEEEecCCCCHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIP-YRGNFY------------DVRD-LR-LCGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~-~R~~~~------------~~~~-~~-~~~~~~~~~~~~~Dl~d~~~   80 (303)
                      .++++|||||+|.||.++++.|+++|.+ |+++ .|+...            ..+. .. +.....++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4679999999999999999999999987 5555 676422            1111 11 11112468999999999999


Q ss_pred             HHHHhcc------cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC-----CceEEEEecCccCCCC
Q psy4233          81 IRKAIKY------SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG-----VEKFIHISALNADPNP  141 (303)
Q Consensus        81 ~~~~~~~------~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~Ss~~~~~~~  141 (303)
                      +.++++.      +|+|||+||....        +.....+++|+.++.++.+++....     ..+||++||.......
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9998865      6999999997432        2234678999999999999998766     6799999998775421


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                           .....|+.+|...+.+.++.   +++++.+.||.+-.+... .......+  ..          .. ...+..++
T Consensus       410 -----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~-~~~~~~~~--~~----------~g-~~~l~pee  470 (525)
T 3qp9_A          410 -----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVT-EGATGERL--RR----------LG-LRPLAPAT  470 (525)
T ss_dssp             -----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGG-SSHHHHHH--HH----------TT-BCCBCHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccccc-chhhHHHH--Hh----------cC-CCCCCHHH
Confidence                 23468999999999987664   789999999988222110 11111111  10          01 24688999


Q ss_pred             HHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHH
Q psy4233         219 VAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH  255 (303)
Q Consensus       219 va~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~  255 (303)
                      +++++..++..+..   ...+.   .+.|..+...+.
T Consensus       471 ~a~~l~~~l~~~~~---~v~v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          471 ALTALDTALGHGDT---AVTIA---DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHHHHTCS---EEEEC---CBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC---eEEEE---eCCHHHHHhhcc
Confidence            99999999986432   22222   355666655443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.66  E-value=3.1e-15  Score=130.54  Aligned_cols=215  Identities=9%  Similarity=0.030  Sum_probs=143.0

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCC---------C---cccccchh-cCCCCceEEEecCCCCH--H-
Q psy4233          18 GVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGN---------F---YDVRDLRL-CGDLGQVLFQPYHPRND--D-   79 (303)
Q Consensus        18 ~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~---------~---~~~~~~~~-~~~~~~~~~~~~Dl~d~--~-   79 (303)
                      .++++||||++  .||.+++++|+++|++|++..|++         .   ........ ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999776543         1   11111111 11123478889999876  5 


Q ss_pred             -----------------HHHHHhc-------ccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHHHhcC
Q psy4233          80 -----------------EIRKAIK-------YSNVVINLIGREF----------ATKNFTIADANVEIPARLARLSKEMG  125 (303)
Q Consensus        80 -----------------~~~~~~~-------~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~~  125 (303)
                                       ++.++++       .+|++||+||...          .+.....+++|+.++..+.+++...=
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             5554432       4899999998521          12345789999999999999886531


Q ss_pred             C--ceEEEEecCccCCCCCCCCCCCCC-chhHHHHHHHHHHHh--------hCCCEEEEeecceeeCCCchhhH------
Q psy4233         126 V--EKFIHISALNADPNPPTYYISGGS-QFYRTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDKFLRY------  188 (303)
Q Consensus       126 ~--~~~v~~Ss~~~~~~~~~~~~~~~~-~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~------  188 (303)
                      .  .+||++||.......     .... .|+.+|...+.+.+.        .++.+..+.||.+..+.......      
T Consensus       162 ~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  236 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVV-----PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             EEEEEEEEEECGGGTSCC-----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-------
T ss_pred             hhCCeEEEEeCccccCCC-----CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccc
Confidence            1  489999998776421     2233 899999999877653        47999999999887542110000      


Q ss_pred             -------------------------------------HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         189 -------------------------------------YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       189 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                                                           ...+........|.        ..+...+|+|+++++++... 
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peevA~~v~fL~s~~a  308 (329)
T 3lt0_A          237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL--------RQKLLSTDIGSVASFLLSRES  308 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHSSS--------CSCCCHHHHHHHHHHHHSGGG
T ss_pred             ccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc--------cCcCCHHHHHHHHHHHhCchh
Confidence                                                 00000001111221        23578999999999999643 


Q ss_pred             -CCCCcEEEEeCCccc
Q psy4233         231 -DAAGKIYQAVGPKRY  245 (303)
Q Consensus       231 -~~~g~~~~i~~~~~~  245 (303)
                       ...|+.+.+.+|..+
T Consensus       309 ~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          309 RAITGQTIYVDNGLNI  324 (329)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             ccccCcEEEEcCCeeE
Confidence             347889999887654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.65  E-value=3.2e-16  Score=147.35  Aligned_cols=202  Identities=12%  Similarity=0.057  Sum_probs=134.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC---------CCcccccchhcCCCCceEEEecCCCCHHHHHHH
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---------NFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~---------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      ..+++++++||||+|.||.+++++|+++|++|++++|.         ............. ... .+.+|+.|.+++.++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-~~~-~~~~D~~d~~~~~~~   92 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK-AGG-EAVADYNSVIDGAKV   92 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH-TTC-CEEECCCCGGGHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH-hCC-eEEEEeCCHHHHHHH
Confidence            45678899999999999999999999999999999872         1111111111100 111 234799998877776


Q ss_pred             hc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCC
Q psy4233          85 IK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        85 ~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                      ++       .+|++||+||....        +.....+++|+.++.++++++    ++.+..+||++||.......    
T Consensus        93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~----  168 (613)
T 3oml_A           93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN----  168 (613)
T ss_dssp             HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----
Confidence            65       47999999996322        234578899999999999988    45556799999998664311    


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                       .....|+.+|...+.+.+..       ++.+..+.||.+-.....              ..+     ... ...+..+|
T Consensus       169 -~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~--------------~~~-----~~~-~~~~~ped  227 (613)
T 3oml_A          169 -FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG--------------ILP-----DIL-FNELKPKL  227 (613)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC--------------CCC-----HHH-HTTCCGGG
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh--------------ccc-----hhh-hhcCCHHH
Confidence             23468999999999887663       688899999754211000              000     111 34568899


Q ss_pred             HHHHHHHHhcCCC-CCCcEEEEeCC
Q psy4233         219 VAAAIVAACKDPD-AAGKIYQAVGP  242 (303)
Q Consensus       219 va~~~~~~~~~~~-~~g~~~~i~~~  242 (303)
                      +|.+++.++.... ..|+.+++.+|
T Consensus       228 vA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          228 IAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             THHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHhcCCCcCCCceEEEECCC
Confidence            9999999987642 36888887654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.55  E-value=1.8e-13  Score=138.84  Aligned_cols=221  Identities=13%  Similarity=0.066  Sum_probs=147.9

Q ss_pred             ccCCCcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEeecCCCcccc----cc-hhcC-CCCceEEEecCCCCHHHHHHHhc
Q psy4233          14 SSFNGVVATVFGASGY-MGSYLCNKLGKQGSQIIIPYRGNFYDVR----DL-RLCG-DLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ++++++++|||||+|. ||.++++.|+++|++|++++++......    .+ .... ...++.++.+|++|.+++.++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3466789999999999 9999999999999999998654333221    11 1111 12468899999999999887663


Q ss_pred             -----------ccCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHhc------CCceEEEEecCccC
Q psy4233          87 -----------YSNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKEM------GVEKFIHISALNAD  138 (303)
Q Consensus        87 -----------~~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~Ss~~~~  138 (303)
                                 .+|+|||+||....           +.....+++|+.++.+++++++..      +..+||++||....
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                       48999999996322           123468899999999888774322      22489999998765


Q ss_pred             CCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcceeeecCCCcee
Q psy4233         139 PNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRKLAVYKKGEETI  210 (303)
Q Consensus       139 ~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (303)
                      ..       ....|+.+|..++.+.+..       .++++.+.||++- .+............    ...+         
T Consensus       808 ~g-------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~----~~~p---------  867 (1878)
T 2uv9_A          808 FG-------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGV----EKLG---------  867 (1878)
T ss_dssp             SS-------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHH----HTTT---------
T ss_pred             cC-------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHH----HhcC---------
Confidence            42       2468999999999876531       2778889999887 44322111111111    1111         


Q ss_pred             eCceeHHHHHHHHHHHhcCCC---CCCcEEEEe--CCcc--cCHHHHHHHH
Q psy4233         211 KQPVYVGDVAAAIVAACKDPD---AAGKIYQAV--GPKR--YLLSELLDWF  254 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~~---~~g~~~~i~--~~~~--~s~~e~~~~i  254 (303)
                      ..+.+.+|+|++++.++....   ..|+.+.+.  +|..  ..+.++...+
T Consensus       868 lr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          868 VRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             CCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            123589999999999986432   246677663  5533  3455554433

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.53  E-value=8.2e-14  Score=141.57  Aligned_cols=219  Identities=12%  Similarity=0.043  Sum_probs=145.9

Q ss_pred             ccCCCcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEeecCCCccccc----c-hhcC-CCCceEEEecCCCCHHHHHHHhc
Q psy4233          14 SSFNGVVATVFGASGY-MGSYLCNKLGKQGSQIIIPYRGNFYDVRD----L-RLCG-DLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      +++++++++||||+|. ||.++++.|+++|++|++++++.......    + .... ...++.++.+|++|.+++.++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3467789999999999 99999999999999999985433322211    1 1111 12468899999999999887653


Q ss_pred             -------------ccCEEEEccccCccc-----------cchhhhhhhcchHHHHHHHHHhcCC------ceEEEEecCc
Q psy4233          87 -------------YSNVVINLIGREFAT-----------KNFTIADANVEIPARLARLSKEMGV------EKFIHISALN  136 (303)
Q Consensus        87 -------------~~D~vi~~a~~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~------~~~v~~Ss~~  136 (303)
                                   .+|++||+||.....           .....+++|+.++..++++++....      .+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         489999999964221           2246889999999999998854332      4899999987


Q ss_pred             cCCCCCCCCCCCCCchhHHHHHHHHH-HHh----hC--CCEEEEeecceee-CCCchhhHHHHHHHhhhcceeeecCCCc
Q psy4233         137 ADPNPPTYYISGGSQFYRTKYQGEKE-VLR----EF--PEATIFRPSDMYG-SGDKFLRYYGHMWRHVFRKLAVYKKGEE  208 (303)
Q Consensus       137 ~~~~~~~~~~~~~~~y~~~K~~~e~~-~~~----~~--~~~~ilrp~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (303)
                      ....       ....|+.+|...+.+ .+.    ++  +.++.+.||++.+ +............    ...+       
T Consensus       831 g~~g-------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~----~~~p-------  892 (1887)
T 2uv8_A          831 GTFG-------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGI----EKMG-------  892 (1887)
T ss_dssp             TCSS-------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHH----HTTS-------
T ss_pred             hccC-------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHH----HhcC-------
Confidence            6542       346899999999988 332    22  6788899999984 3211001111111    1111       


Q ss_pred             eeeCceeHHHHHHHHHHHhcCC-C--CCCcEEEEe--CCcc--cCHHHHHH
Q psy4233         209 TIKQPVYVGDVAAAIVAACKDP-D--AAGKIYQAV--GPKR--YLLSELLD  252 (303)
Q Consensus       209 ~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i~--~~~~--~s~~e~~~  252 (303)
                        ..+...+|+|.+++.++... .  ..|+.+.+.  +|..  ..+.++..
T Consensus       893 --lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~  941 (1887)
T 2uv8_A          893 --VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTA  941 (1887)
T ss_dssp             --CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHH
Confidence              12458999999999998743 1  146677663  5432  24444443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.53  E-value=2.6e-14  Score=141.15  Aligned_cols=221  Identities=11%  Similarity=0.042  Sum_probs=144.5

Q ss_pred             CcccCCCcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEee-cCCCcccccchhc-C----CCCceEEEecCCCCHHHHHHH
Q psy4233          12 GRSSFNGVVATVFGASGY-MGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLRLC-G----DLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~-iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~-~----~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      ..+++++++++||||+|. ||.++++.|+++|++|++++ |+.....+..... .    ...++.++.+|++|.+++.++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            335567889999999998 99999999999999999984 5433222111111 1    124688999999999888876


Q ss_pred             hc-------------ccCEEEEccccCccc-----------cchhhhhhhcchHHHHHHHHHhcC------CceEEEEec
Q psy4233          85 IK-------------YSNVVINLIGREFAT-----------KNFTIADANVEIPARLARLSKEMG------VEKFIHISA  134 (303)
Q Consensus        85 ~~-------------~~D~vi~~a~~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~------~~~~v~~Ss  134 (303)
                      ++             .+|+|||+||.....           .....+++|+.++.+++++++...      -.+||++||
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence            53             489999999963221           224688999999999999874321      148999999


Q ss_pred             CccCCCCCCCCCCCCCchhHHHHHHHHHHHh-h----C--CCEEEEeecceee-CCCchhhHHHHHHHhhhcceeeecCC
Q psy4233         135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLR-E----F--PEATIFRPSDMYG-SGDKFLRYYGHMWRHVFRKLAVYKKG  206 (303)
Q Consensus       135 ~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-~----~--~~~~ilrp~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (303)
                      ......       ....|+.+|+..+.+... .    +  +.++.+.||++.+ +........    .......+     
T Consensus       630 iAG~~G-------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~----~~~l~~ip-----  693 (1688)
T 2pff_A          630 NHGTFG-------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII----AEGIEKMG-----  693 (1688)
T ss_dssp             CTTTSS-------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC----STTTSSSS-----
T ss_pred             hHhccC-------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH----HHHHHhCC-----
Confidence            876542       346899999999998432 1    2  5666688888874 321110000    00001111     


Q ss_pred             CceeeCceeHHHHHHHHHHHhcCCC---CCCcEEEEe--CCcc--cCHHHHHH
Q psy4233         207 EETIKQPVYVGDVAAAIVAACKDPD---AAGKIYQAV--GPKR--YLLSELLD  252 (303)
Q Consensus       207 ~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~i~--~~~~--~s~~e~~~  252 (303)
                          ..+.+.+|+|++++.++....   ..|+.+.+.  +|..  ..+.++..
T Consensus       694 ----lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella  742 (1688)
T 2pff_A          694 ----VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTA  742 (1688)
T ss_dssp             ----CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHH
T ss_pred             ----CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHH
Confidence                123578999999999997541   146666653  4432  24444443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.51  E-value=2.4e-13  Score=127.40  Aligned_cols=221  Identities=14%  Similarity=0.119  Sum_probs=150.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCC-CCHHHHH-H---Hhccc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHP-RNDDEIR-K---AIKYS   88 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl-~d~~~~~-~---~~~~~   88 (303)
                      ++++++++||||++.||.+++++|.++|++|++.+|...+. .+.+...  ..++..+.+|+ .+.+.+- +   .+.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA--GGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhc--CCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            45678999999999999999999999999999987643221 1222211  13567778888 5544332 2   23458


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +..+..+++|+.++..+.+++-    +.+-.+||++||.......     .....|+.+|
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-----~~~~~Y~asK  471 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-----FGQANYSSSK  471 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----TTBHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----CCChhHHHHH
Confidence            999999996321        2345789999999999888773    3344599999998664311     2235799999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .....+.+..       ++.+..+.||. -.+..   ..   ..  .          ... .+....+|+|.++++++..
T Consensus       472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~---~~---~~--~----------~~~-~~~~~pe~vA~~v~~L~s~  531 (604)
T 2et6_A          472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT---LS---IM--R----------EQD-KNLYHADQVAPLLVYLGTD  531 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSSCGGGTHHHHHHTTST
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc---cc---cC--c----------hhh-ccCCCHHHHHHHHHHHhCC
Confidence            9999877653       68899999983 22211   00   00  0          001 2346889999999999875


Q ss_pred             CC-CCCcEEEEeCC-----------------cccCHHHHHHHHHHHhcCCC
Q psy4233         230 PD-AAGKIYQAVGP-----------------KRYLLSELLDWFHVVMKKGE  262 (303)
Q Consensus       230 ~~-~~g~~~~i~~~-----------------~~~s~~e~~~~i~~~~g~~~  262 (303)
                      .. ..|+++.+.+|                 ..++..++.+.+.+......
T Consensus       532 ~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          532 DVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             TCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             ccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            33 47888888765                 23678888888888776653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.47  E-value=3.9e-13  Score=118.96  Aligned_cols=199  Identities=10%  Similarity=-0.045  Sum_probs=129.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCccccc-----------c-hh-cCCCCceEEEecCCCCHHHHHH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRD-----------L-RL-CGDLGQVLFQPYHPRNDDEIRK   83 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~-----------~-~~-~~~~~~~~~~~~Dl~d~~~~~~   83 (303)
                      ++++|||||++.||.++++.|.+ .|.+|+++.|+.......           + .. .....++..+.+|++|++++.+
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~  140 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ  140 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            67999999999999999999999 999999998875433221           0 11 1112357889999999988776


Q ss_pred             Hh--------cccCEEEEccccC-------------c-----------------------------cccchhhhhhhcch
Q psy4233          84 AI--------KYSNVVINLIGRE-------------F-----------------------------ATKNFTIADANVEI  113 (303)
Q Consensus        84 ~~--------~~~D~vi~~a~~~-------------~-----------------------------~~~~~~~~~~n~~~  113 (303)
                      ++        .++|++||+||..             .                             .+.....+++|..+
T Consensus       141 ~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~  220 (422)
T 3s8m_A          141 VIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQ  220 (422)
T ss_dssp             HHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchh
Confidence            54        3479999999752             0                             01112345566655


Q ss_pred             HH-HHHHHHHhcCC----ceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233         114 PA-RLARLSKEMGV----EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       114 ~~-~l~~~~~~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                      .. .+++++.....    .++|++||.+....   .|......|+.+|..++.+.+..       |+++..+.||.+-.+
T Consensus       221 ~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~---~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~  297 (422)
T 3s8m_A          221 DWELWIDALEGAGVLADGARSVAFSYIGTEIT---WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ  297 (422)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG---HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc---CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence            53 55666543322    38999999876431   01011257899999999887763       789999999999877


Q ss_pred             CCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         182 GDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ................+  ++        ...-..+|+|+++.+++..
T Consensus       298 ~~~~ip~~~~~~~~~~~--~m--------~r~G~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          298 ASAAIPVMPLYISMVYK--IM--------KEKGLHEGTIEQLDRLFRE  335 (422)
T ss_dssp             TGGGSTHHHHHHHHHHH--HH--------HHTTCCCCHHHHHHHHHHH
T ss_pred             hhhcCCCChHHHHHHHh--hh--------cCCcChHHHHHHHHHHhcc
Confidence            54332222211110111  11        1134457889999888864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.46  E-value=6.4e-13  Score=116.59  Aligned_cols=200  Identities=11%  Similarity=-0.037  Sum_probs=129.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCccccc-----------ch-h-cCCCCceEEEecCCCCHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRD-----------LR-L-CGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~-----------~~-~-~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      .+++++||||++.||.++++.|++ .|.+|+++.|+.......           .. . .....++..+.+|++|.+++.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            467999999999999999999999 999999998865432211           11 1 111245788999999998887


Q ss_pred             HHhc-------ccCEEEEccccCc------------------------------------------cccchhhhhhhcch
Q psy4233          83 KAIK-------YSNVVINLIGREF------------------------------------------ATKNFTIADANVEI  113 (303)
Q Consensus        83 ~~~~-------~~D~vi~~a~~~~------------------------------------------~~~~~~~~~~n~~~  113 (303)
                      ++++       ++|++||+||...                                          .+.....+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            7654       3799999998630                                          01223466777776


Q ss_pred             HH-HHHHHHHhcCC----ceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh-------h-CCCEEEEeecceee
Q psy4233         114 PA-RLARLSKEMGV----EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR-------E-FPEATIFRPSDMYG  180 (303)
Q Consensus       114 ~~-~l~~~~~~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~-~~~~~ilrp~~~~G  180 (303)
                      .. .+++++.....    .++|.+||.+....   .|......|+.+|..++.+.+.       . |+++..+.||.+-.
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~---~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT---HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc---CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            65 55665543221    38999999876431   1111126899999999987765       3 67899999998876


Q ss_pred             CCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      +................+..          ..+-..+|+++++..++..
T Consensus       283 ~~s~~ip~~p~y~~~l~~~m----------kr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          283 QASSAIPMMPLYLSLLFKVM----------KEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHHTSTTHHHHHHHHHHHH----------HHHTCCCCHHHHHHHHHHH
T ss_pred             chhhcCCCCcHHHHHHHHHH----------hcCCCcHHHHHHHHHHHhc
Confidence            53221111111110011111          1234457889999888864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.43  E-value=2e-12  Score=124.76  Aligned_cols=198  Identities=12%  Similarity=0.086  Sum_probs=139.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHH-hCCC-eEEEeecCCCccc---ccchh-cCCCCceEEEecCCCCHHHHHHHhcc---
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLG-KQGS-QIIIPYRGNFYDV---RDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY---   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll-~~g~-~V~~~~R~~~~~~---~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---   87 (303)
                      .+++++||||+|.||.++++.|. ++|. .|++++|+.....   +.... .....++.++.+|++|.+++.++++.   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999999 7997 5888899743221   11111 11124689999999999999998864   


Q ss_pred             ---cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 ---SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ---~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                         .|.|||+||....        +.....+++|+.++.++.+++. ... +||++||....-..     .....|+.+|
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~-----~g~~~YaAak  681 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGS-----GGQGNYAAAN  681 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTC-----SSCHHHHHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCC-----CCCHHHHHHH
Confidence               5999999997322        2345788999999999999983 234 89999998764321     2346899999


Q ss_pred             HHHHHHHHh---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233         157 YQGEKEVLR---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       157 ~~~e~~~~~---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      ...+.+.++   .|++++.+.||.+-+++..  ..............        . ...+..++....+..++..+..
T Consensus       682 a~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~--~~~~~~~~~~~~~~--------g-~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          682 SFLDALAQQRQSRGLPTRSLAWGPWAEHGMA--STLREAEQDRLARS--------G-LLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCSCCCHH--HHHHHHHHHHHHHT--------T-BCCCCHHHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHHHcCCeEEEEECCeECcchhh--ccccHHHHHHHHhc--------C-CCCCCHHHHHHHHHHHHhCCCc
Confidence            988877655   3899999999988755321  11111000000011        1 2457889999999888876543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.42  E-value=3.4e-12  Score=119.66  Aligned_cols=218  Identities=12%  Similarity=0.116  Sum_probs=142.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC--------cccccc-hhc-CCCCceEEEecCCCCHHHHH--
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF--------YDVRDL-RLC-GDLGQVLFQPYHPRNDDEIR--   82 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~--------~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~--   82 (303)
                      ++++++++||||++.||.+++++|+++|++|++.+|+..        +..+.. ... ....++.   +|+.|.+++.  
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHH
Confidence            356789999999999999999999999999999877531        111111 111 0011232   4555543222  


Q ss_pred             -----HHhcccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCC
Q psy4233          83 -----KAIKYSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYY  145 (303)
Q Consensus        83 -----~~~~~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~  145 (303)
                           +.+..+|++||+||...        .+..+..+++|+.++..+.+++-    +.+-.+||++||.......    
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~----  157 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN----  157 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----
Confidence                 22345899999999632        12345789999999999888763    3344599999998664211    


Q ss_pred             CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD  218 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  218 (303)
                       .....|+.+|.....+.+..       ++.+..+.|+. .   ..   +.    . .  ..+     ... ......+|
T Consensus       158 -~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~---T~---m~----~-~--~~~-----~~~-~~~~~pe~  216 (604)
T 2et6_A          158 -FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-R---SR---MT----E-S--IMP-----PPM-LEKLGPEK  216 (604)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C---CH---HH----H-T--TSC-----HHH-HTTCSHHH
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-c---Cc---cc----c-c--cCC-----hhh-hccCCHHH
Confidence             22357999999999877653       68888999962 1   11   10    0 0  000     011 23468999


Q ss_pred             HHHHHHHHhcCC-CCCCcEEEEeCC------------------cccCHHHHHHHHHHHhcC
Q psy4233         219 VAAAIVAACKDP-DAAGKIYQAVGP------------------KRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       219 va~~~~~~~~~~-~~~g~~~~i~~~------------------~~~s~~e~~~~i~~~~g~  260 (303)
                      +|.++++++... ...|+.+.+.+|                  ...+..++.+.+.+....
T Consensus       217 vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          217 VAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             HHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            999999999754 236778887665                  235778888888776543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.38  E-value=1.6e-12  Score=115.88  Aligned_cols=163  Identities=10%  Similarity=-0.115  Sum_probs=111.4

Q ss_pred             CCCcEEEEEcCCChhHHH--HHHHHHhCCCeEEEeecCCCccc-----------ccch-h-cCCCCceEEEecCCCCHHH
Q psy4233          16 FNGVVATVFGASGYMGSY--LCNKLGKQGSQIIIPYRGNFYDV-----------RDLR-L-CGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~-----------~~~~-~-~~~~~~~~~~~~Dl~d~~~   80 (303)
                      ..+++++||||++.||.+  ++++|.++|++|+++.|+.....           +.+. . .....++..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            357899999999999999  99999999999999998654321           1111 1 1112458899999999988


Q ss_pred             HHHHhc-------ccCEEEEccccC-------------c-----------------------------cccchhhhhhhc
Q psy4233          81 IRKAIK-------YSNVVINLIGRE-------------F-----------------------------ATKNFTIADANV  111 (303)
Q Consensus        81 ~~~~~~-------~~D~vi~~a~~~-------------~-----------------------------~~~~~~~~~~n~  111 (303)
                      +.++++       ++|++||+||..             .                             .+.....+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            877654       379999999863             0                             011123445555


Q ss_pred             chHH-HHHHHHHhcCC----ceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh--------hCCCEEEEeecce
Q psy4233         112 EIPA-RLARLSKEMGV----EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR--------EFPEATIFRPSDM  178 (303)
Q Consensus       112 ~~~~-~l~~~~~~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~  178 (303)
                      .+.. .+++++.....    .++|.+||.+....   .|......|+.+|..++.+.+.        .|+++..+.||.+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v  294 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKAL  294 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcC
Confidence            5443 45555544332    38999999865431   1111126899999999887654        4688999999988


Q ss_pred             eeC
Q psy4233         179 YGS  181 (303)
Q Consensus       179 ~G~  181 (303)
                      -.+
T Consensus       295 ~T~  297 (418)
T 4eue_A          295 VTK  297 (418)
T ss_dssp             CCH
T ss_pred             cCh
Confidence            765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.37  E-value=2.4e-12  Score=94.65  Aligned_cols=94  Identities=17%  Similarity=0.148  Sum_probs=76.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ++|+|+|+|+ |++|+.+++.|++.| ++|++++|++.. .+.+.    ..+++++.+|+.+.+++.+.++++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~-~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA-LAVLN----RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH-HHHHH----TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH-HHHHH----hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4679999999 999999999999999 999999997432 22222    2458889999999999999999999999999


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      +..              ....+++++.+.+++++.
T Consensus        78 ~~~--------------~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           78 PFF--------------LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             CGG--------------GHHHHHHHHHHTTCEEEC
T ss_pred             Cch--------------hhHHHHHHHHHhCCCEEE
Confidence            632              134789999999985554

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.26  E-value=2.5e-11  Score=105.25  Aligned_cols=118  Identities=12%  Similarity=0.031  Sum_probs=83.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +.++|||+||||+|++|+.++..|+.+|  ++|++++++.. ......+........+ .+ +.+.+++.++++++|+||
T Consensus         5 ~~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            5 GAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             ---CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEE
Confidence            3456899999999999999999999998  88999887643 1111011100001111 11 234567888899999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      |++|...  .....++...|+..++++++++.+.+.+.+|+++|.
T Consensus        82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            9999643  234467889999999999999999988778887763

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.10  E-value=4.7e-11  Score=103.74  Aligned_cols=159  Identities=10%  Similarity=0.055  Sum_probs=100.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEeecCC---Cccccc--chhcCCCCceEEEecCCCCHHHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-------QIIIPYRGN---FYDVRD--LRLCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~---~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      ++|||+||||+||+|++++..|+..|.       +|.++++.+   .+..+.  ..+....  ..+ ..|+...+++.++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~-~~~i~~~~~~~~a   80 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPL-LAGMTAHADPMTA   80 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTT-EEEEEEESSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--ccc-cCcEEEecCcHHH
Confidence            467999999999999999999999885       788887761   111111  0010000  011 1344445567788


Q ss_pred             hcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEecCcc------CCCCCCCCCCCCCchhH
Q psy4233          85 IKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG-VE-KFIHISALNA------DPNPPTYYISGGSQFYR  154 (303)
Q Consensus        85 ~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss~~~------~~~~~~~~~~~~~~y~~  154 (303)
                      ++++|+|||+||...  .....++...|+..++++++++++++ .+ ++|++|....      .......|  +...++.
T Consensus        81 l~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p--~~~v~g~  158 (329)
T 1b8p_A           81 FKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLP--AKNFTAM  158 (329)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSC--GGGEEEC
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCC--HHHEEEe
Confidence            999999999999643  23455788999999999999999984 65 8888886321      00111111  1123555


Q ss_pred             HHHHHHHHH----HhhCCCEEEEeecceee
Q psy4233         155 TKYQGEKEV----LREFPEATIFRPSDMYG  180 (303)
Q Consensus       155 ~K~~~e~~~----~~~~~~~~ilrp~~~~G  180 (303)
                      ++....++.    +..+++...++...++|
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G  188 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEKLFVWG  188 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEESCEEEB
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceEEEEEe
Confidence            555443332    33477666666555677

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.08  E-value=6.1e-10  Score=118.65  Aligned_cols=157  Identities=17%  Similarity=0.142  Sum_probs=113.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCccc---ccchhc-CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDV---RDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~---~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+++++||||+|.||.++++.|+++|.+ |++++|+.....   +..... ....++.++.+|++|.+++.++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999987 777788754321   111111 112468889999999988887664     


Q ss_pred             -ccCEEEEccccC--------ccccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 -YSNVVINLIGRE--------FATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 -~~D~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                       .+|+|||+||..        ..+.....+++|+.++.++.+++...  ...+||++||.......     .....|+.+
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~-----~g~~~Y~aa 2037 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN-----AGQANYGFA 2037 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC-----TTCHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC-----CCcHHHHHH
Confidence             379999999963        22345578899999999998887653  23699999998764321     234679999


Q ss_pred             HHHHHHHHHh---hCCCEEEEeecce
Q psy4233         156 KYQGEKEVLR---EFPEATIFRPSDM  178 (303)
Q Consensus       156 K~~~e~~~~~---~~~~~~ilrp~~~  178 (303)
                      |...+.+.+.   .|++...+..+.+
T Consensus      2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccCc
Confidence            9999998874   3777777776554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.99  E-value=1.2e-08  Score=109.07  Aligned_cols=222  Identities=14%  Similarity=0.005  Sum_probs=136.4

Q ss_pred             CCCcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEeecCCCcc----cccc-hhcC-CCCceEEEecCCCCHHHHHHHh---
Q psy4233          16 FNGVVATVFGASGY-MGSYLCNKLGKQGSQIIIPYRGNFYD----VRDL-RLCG-DLGQVLFQPYHPRNDDEIRKAI---   85 (303)
Q Consensus        16 ~~~~~vlVtGatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~---   85 (303)
                      +++++++||||++. ||.++++.|+++|.+|++.+|+....    .+.+ .... ...++..+.+|++|.+++.+++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            67899999999999 99999999999999999999976541    1111 1111 1235788999999999888764   


Q ss_pred             -c-------ccCEEEEcccc----Cc---------cccch----hhhhhhcchHHHHHHHHHh----cCCc---eEEEEe
Q psy4233          86 -K-------YSNVVINLIGR----EF---------ATKNF----TIADANVEIPARLARLSKE----MGVE---KFIHIS  133 (303)
Q Consensus        86 -~-------~~D~vi~~a~~----~~---------~~~~~----~~~~~n~~~~~~l~~~~~~----~~~~---~~v~~S  133 (303)
                       +       +.|++||+||.    ..         .....    ..+++|+.++..+++++..    .+..   .++..+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence             2       37999999996    11         01121    2378888888887776643    2221   222222


Q ss_pred             cCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCC-chhhHHHHHHHhhhcceeeec
Q psy4233         134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGD-KFLRYYGHMWRHVFRKLAVYK  204 (303)
Q Consensus       134 s~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~  204 (303)
                      |. ..+.     ......|+.+|..++.+.+..        ++.++.+.||++-+... ..........    ...+   
T Consensus      2294 ss-~~g~-----~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~----~~~~--- 2360 (3089)
T 3zen_D         2294 SP-NRGM-----FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAV----EEAG--- 2360 (3089)
T ss_dssp             CS-STTS-----CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHH----GGGS---
T ss_pred             Cc-cccc-----CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHH----HhcC---
Confidence            21 1111     012358999999998877653        24567788888874321 1111111111    1111   


Q ss_pred             CCCceeeCceeHHHHHHHHHHHhcCCCC---CCcE--EEEeCCc---ccCHHHHHHHHHH
Q psy4233         205 KGEETIKQPVYVGDVAAAIVAACKDPDA---AGKI--YQAVGPK---RYLLSELLDWFHV  256 (303)
Q Consensus       205 ~~~~~~~~~i~~~Dva~~~~~~~~~~~~---~g~~--~~i~~~~---~~s~~e~~~~i~~  256 (303)
                        .    .....+|+|.++++++.....   .++.  .++.++-   ...+.++...+.+
T Consensus      2361 --~----r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2361 --V----TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             --C----BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             --C----CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence              1    123889999999998863211   2222  3344543   3578888876543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.96  E-value=1.2e-10  Score=100.37  Aligned_cols=111  Identities=22%  Similarity=0.210  Sum_probs=77.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeec--CCCccccc----ch-hcCCC-CceEEEecCCCCHHHHHHHhccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYR--GNFYDVRD----LR-LCGDL-GQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R--~~~~~~~~----~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      |||+||||+|++|++++..|+.+|.  ++.++++  +.. ..+.    +. ..... ..+.+...    .+++.++++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~-~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~ga   75 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSIN-KLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDES   75 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHH-HHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchh-hhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCC
Confidence            5899999999999999999998884  6777776  321 0110    10 00000 11222221    12255678999


Q ss_pred             CEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          89 NVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        89 D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      |+|||+||...  ......+...|+..++++++++++++ +.+|+++|-
T Consensus        76 D~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           76 DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            99999999642  23445789999999999999999998 888888874

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.94  E-value=4.6e-09  Score=79.58  Aligned_cols=101  Identities=17%  Similarity=0.181  Sum_probs=73.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~   94 (303)
                      +++++|+|+|+ |.+|+.+++.|.+.|++|++++|++.. .+....    .+...+.+|..+.+.+.++ +.++|+||++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~-~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-VNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-HHTTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            34678999998 999999999999999999999886432 222211    2356788999998888775 7789999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ++...        +.|    ..+.+.+++.++++++..++
T Consensus        78 ~~~~~--------~~~----~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGANI--------QAS----TLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSCH--------HHH----HHHHHHHHHTTCSEEEEECC
T ss_pred             CCCch--------HHH----HHHHHHHHHcCCCeEEEEeC
Confidence            87521        112    24677788888777775553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.94  E-value=2.2e-10  Score=98.35  Aligned_cols=110  Identities=12%  Similarity=0.038  Sum_probs=76.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeec--CCCccccc----ch-hcCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYR--GNFYDVRD----LR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R--~~~~~~~~----~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |||+||||+|++|++++..|+..+.  ++.++++  .... .+.    +. .......+.+.. +  +    .+.++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~-~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDD-TVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHH-HHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhh-HHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCC
Confidence            6999999999999999999998874  6777777  3211 111    00 000012233332 2  2    34578999


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      +|||+++...  .....+....|+..++++++++++.+.+.+|+++|-=
T Consensus        73 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP  121 (303)
T 1o6z_A           73 VVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP  121 (303)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence            9999999643  2344568899999999999999999888888887643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.93  E-value=3.5e-09  Score=95.74  Aligned_cols=107  Identities=15%  Similarity=0.208  Sum_probs=76.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |++++|+|+| +|++|+++++.|++.|++|++++|+.... +.+.  ...++++.+.+|+.|.+++.++++++|+|||++
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a-~~la--~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA-KKLS--AGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH-HHTT--TTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH-HHHH--HhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            4568999998 79999999999999999999999974322 2211  112347889999999999999999999999999


Q ss_pred             ccCccc-cchhhhh--hh-------cchHHHHHHHHHhcCC
Q psy4233          96 GREFAT-KNFTIAD--AN-------VEIPARLARLSKEMGV  126 (303)
Q Consensus        96 ~~~~~~-~~~~~~~--~n-------~~~~~~l~~~~~~~~~  126 (303)
                      +..... -.....+  .+       ...+.+++++|+++|+
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv  117 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI  117 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred             ccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence            863211 0111111  12       2357789999999997

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.93  E-value=5.9e-10  Score=95.06  Aligned_cols=84  Identities=17%  Similarity=0.110  Sum_probs=65.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++++++++||||+|.+|++++++|+++|.+|++++|+.....+.........+++++.+|++|.+++.++++++|+|||+
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            35678999999999999999999999999999999974332211111100023677889999999999999999999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      ++..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            9853

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.84  E-value=1.2e-08  Score=76.83  Aligned_cols=97  Identities=21%  Similarity=0.264  Sum_probs=70.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++|++.. .+.+...   .++.++.+|..+.+.+.+. +.++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~-~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI-CKKASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHHh---cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            479999997 999999999999999999999986432 2222211   1467788999998887755 678999999975


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      ..         ..|    ..+.+.++..+.+++|..
T Consensus        79 ~~---------~~~----~~~~~~~~~~~~~~ii~~  101 (140)
T 1lss_A           79 KE---------EVN----LMSSLLAKSYGINKTIAR  101 (140)
T ss_dssp             CH---------HHH----HHHHHHHHHTTCCCEEEE
T ss_pred             Cc---------hHH----HHHHHHHHHcCCCEEEEE
Confidence            31         112    246677777787777753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.81  E-value=7.9e-09  Score=92.29  Aligned_cols=97  Identities=15%  Similarity=0.154  Sum_probs=72.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCC--CCceEEEecCCCCHHHHHHHhcc--cCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGD--LGQVLFQPYHPRNDDEIRKAIKY--SNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~--~D~   90 (303)
                      |++|+|+|| |++|+.+++.|+++|   .+|++.+|+..+..+.......  ..+++.+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            479999999 999999999999998   3899999975433222111111  13588999999999999999988  999


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      |||+++...              ...++++|.++++ +++
T Consensus        80 Vin~ag~~~--------------~~~v~~a~l~~g~-~vv  104 (405)
T 4ina_A           80 VLNIALPYQ--------------DLTIMEACLRTGV-PYL  104 (405)
T ss_dssp             EEECSCGGG--------------HHHHHHHHHHHTC-CEE
T ss_pred             EEECCCccc--------------ChHHHHHHHHhCC-CEE
Confidence            999997521              1257788888886 444

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.80  E-value=1.3e-08  Score=77.03  Aligned_cols=96  Identities=13%  Similarity=0.084  Sum_probs=70.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a   95 (303)
                      +|++|+|+|+ |.+|+.+++.|.++|++|+++++++.. .+.+..    .++.++.+|.+|++.+.++ +.++|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~-~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK-IELLED----EGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-HHHHHH----TTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH-HHHHHH----CCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            4678999998 999999999999999999999996432 222222    3478899999999998876 45799999887


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      +..         +.|.    .++..+++.+..+++-
T Consensus        79 ~~~---------~~n~----~~~~~a~~~~~~~iia  101 (141)
T 3llv_A           79 SDD---------EFNL----KILKALRSVSDVYAIV  101 (141)
T ss_dssp             SCH---------HHHH----HHHHHHHHHCCCCEEE
T ss_pred             CCH---------HHHH----HHHHHHHHhCCceEEE
Confidence            621         1122    4666777777545553

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.75  E-value=2.6e-08  Score=87.85  Aligned_cols=93  Identities=15%  Similarity=0.158  Sum_probs=71.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      .|||+|.|| |++|+.+++.|.+ .++|.+.+|+... .+...     +.+..+..|..|.+++.++++++|+||++++.
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~-~~~~~-----~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~   87 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN-LEKVK-----EFATPLKVDASNFDKLVEVMKEFELVIGALPG   87 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH-HHHHT-----TTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH-HHHHh-----ccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence            579999998 9999999998865 5899998886432 22221     34778899999999999999999999999876


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      ..              ...++++|.++|+ ++|=+|
T Consensus        88 ~~--------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           88 FL--------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             GG--------------HHHHHHHHHHHTC-EEEECC
T ss_pred             cc--------------cchHHHHHHhcCc-ceEeee
Confidence            31              1257788888776 666444

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.74  E-value=3.4e-08  Score=75.90  Aligned_cols=100  Identities=15%  Similarity=0.124  Sum_probs=72.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a   95 (303)
                      ..++|+|+|+ |.+|+.+++.|.+.|++|+++++++.+..+.+... ...+++++.+|.+|++.+.++ ++++|+||.+.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-LGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh-hcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            4568999996 99999999999999999999999743222122110 013588999999999999886 88899999887


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhc-CCceEEE
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEM-GVEKFIH  131 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~  131 (303)
                      +..         +.|.    .+...+++. +..+++.
T Consensus        80 ~~d---------~~n~----~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           80 DND---------ADNA----FVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             SCH---------HHHH----HHHHHHHHHTSSSCEEE
T ss_pred             CCh---------HHHH----HHHHHHHHHCCCCEEEE
Confidence            542         1222    456667665 5556653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.68  E-value=3.5e-08  Score=89.38  Aligned_cols=107  Identities=15%  Similarity=0.189  Sum_probs=75.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++++++|+|+|| |++|+.+++.|++. |++|++++|+.... +.+...   .++..+.+|+.|.+++.++++++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~~---~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA-QALAKP---SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHGG---GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHh---cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            356789999997 99999999999998 68999999974332 222211   2467788999999999999999999999


Q ss_pred             ccccCccc-cc-------hhhhhhhc--chHHHHHHHHHhcCC
Q psy4233          94 LIGREFAT-KN-------FTIADANV--EIPARLARLSKEMGV  126 (303)
Q Consensus        94 ~a~~~~~~-~~-------~~~~~~n~--~~~~~l~~~~~~~~~  126 (303)
                      +++..... -.       ..+++.+.  ..+..++++|+++|+
T Consensus        95 ~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             CCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            99864211 00       11222222  235678889998887

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.64  E-value=3.1e-07  Score=70.60  Aligned_cols=99  Identities=12%  Similarity=0.201  Sum_probs=71.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a   95 (303)
                      ..++|+|+|+ |.+|+.+++.|.+.|++|++++|++.. .+.+..   ..++..+.+|..+.+.+.+. +.++|+||.+.
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~-~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~   92 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYA-FHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAFT   92 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG-GGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence            4679999996 999999999999999999999997543 222220   13467788999888877765 67899999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHh-cCCceEEEEe
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKE-MGVEKFIHIS  133 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~S  133 (303)
                      +...             ....+.+.++. .+..+++...
T Consensus        93 ~~~~-------------~~~~~~~~~~~~~~~~~iv~~~  118 (155)
T 2g1u_A           93 NDDS-------------TNFFISMNARYMFNVENVIARV  118 (155)
T ss_dssp             SCHH-------------HHHHHHHHHHHTSCCSEEEEEC
T ss_pred             CCcH-------------HHHHHHHHHHHHCCCCeEEEEE
Confidence            6421             11245666776 5655666544

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.62  E-value=8.8e-09  Score=89.17  Aligned_cols=113  Identities=17%  Similarity=0.099  Sum_probs=77.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--e-----EEEeecCCC-cccccc--hhc-CCCCceEEEecCCCCHHHHHHHhc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--Q-----IIIPYRGNF-YDVRDL--RLC-GDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~-----V~~~~R~~~-~~~~~~--~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ++||+||||+|+||++++..|+..+.  +     +.++++... +..+..  .+. ...+-..    ++...+...+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence            57999999999999999999998773  5     888888532 111110  110 0001111    1111233456788


Q ss_pred             ccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEec
Q psy4233          87 YSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE--KFIHISA  134 (303)
Q Consensus        87 ~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss  134 (303)
                      ++|+||++||..  ....+.+.++.|...++.+++++++++.+  +++.+|.
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999999863  22456678899999999999999998875  5776664

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.58  E-value=2.4e-07  Score=75.41  Aligned_cols=75  Identities=12%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH
Q psy4233          17 NGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE   80 (303)
Q Consensus        17 ~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   80 (303)
                      .+|+||||||                ||.+|.+++++|+++|++|+++.|.......      ...++..+..  ...++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~~~~~~~~~v--~s~~e   73 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------PHPNLSIREI--TNTKD   73 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------CCTTEEEEEC--CSHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------CCCCeEEEEH--hHHHH
Confidence            4689999999                9999999999999999999999996432110      0124555544  45433


Q ss_pred             ----HHHHhcccCEEEEccccCc
Q psy4233          81 ----IRKAIKYSNVVINLIGREF   99 (303)
Q Consensus        81 ----~~~~~~~~D~vi~~a~~~~   99 (303)
                          +.+.+.++|++||+|+..+
T Consensus        74 m~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           74 LLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHhcCCCCEEEEcCcccc
Confidence                3445567999999999743

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.56  E-value=2.1e-06  Score=74.76  Aligned_cols=82  Identities=10%  Similarity=-0.083  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHH-hCCCeEEEeecCCCcccccc------------h-hcCCCCceEEEecCCCCHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLG-KQGSQIIIPYRGNFYDVRDL------------R-LCGDLGQVLFQPYHPRNDDEIR   82 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~~~~------------~-~~~~~~~~~~~~~Dl~d~~~~~   82 (303)
                      .+|++|||||+..+|.+.+.+|. ..|..|+++.+.........            + ......+...+.+|++|.+.+.
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            47899999999999999999988 67899999888654332211            0 0011145789999999998888


Q ss_pred             HHhc-------ccCEEEEccccC
Q psy4233          83 KAIK-------YSNVVINLIGRE   98 (303)
Q Consensus        83 ~~~~-------~~D~vi~~a~~~   98 (303)
                      ++++       ++|++||+++..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            7664       379999999853

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.56  E-value=2.7e-07  Score=79.40  Aligned_cols=111  Identities=19%  Similarity=0.105  Sum_probs=77.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCC-CC-ceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGD-LG-QVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |||.|+||+|++|+.++..|+..|  .+|.++++.. .......+... .+ +++...    ..+++.++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEEEC
Confidence            599999999999999999999888  7899999875 11111111110 01 122111    124567788999999999


Q ss_pred             cccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          95 IGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        95 a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      +|...  .....+....|....+.+++.+.+.... ++|++|-
T Consensus        76 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            98642  2344567888999999999999887654 7776654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.44  E-value=4.4e-07  Score=73.91  Aligned_cols=95  Identities=16%  Similarity=0.227  Sum_probs=69.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~   97 (303)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++.. .+.+...   .++.++.+|.+|.+.+.++ ++++|+||-+.+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~-~~~l~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDREL-CEEFAKK---LKATIIHGDGSHKEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHH-HHHHHHH---SSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHHH---cCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence            68999996 999999999999999999999987433 2222111   2478999999999999886 6789999987654


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHh-cCCceEEE
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKE-MGVEKFIH  131 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~  131 (303)
                      ..         .|    ..+...+++ .+..++|-
T Consensus        76 d~---------~n----~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           76 DE---------VN----LFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             HH---------HH----HHHHHHHHHTSCCCEEEE
T ss_pred             cH---------HH----HHHHHHHHHHcCCCeEEE
Confidence            21         12    135566665 56667663

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.40  E-value=1.4e-06  Score=70.74  Aligned_cols=178  Identities=7%  Similarity=0.028  Sum_probs=101.5

Q ss_pred             cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233          15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   78 (303)
                      .+++++||||||                ||.+|.+++++|.++|++|+++.|....  ..      ..+++  ..|+.+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l--~~------~~g~~--~~dv~~~   74 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL--PT------PPFVK--RVDVMTA   74 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC--CC------CTTEE--EEECCSH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc--cc------CCCCe--EEccCcH
Confidence            367899999999                7999999999999999999998886421  10      12343  4577776


Q ss_pred             HHHHH----HhcccCEEEEccccCccc----cchh---------hhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC
Q psy4233          79 DEIRK----AIKYSNVVINLIGREFAT----KNFT---------IADANVEIPARLARLSKEM-GVEKFIHISALNADPN  140 (303)
Q Consensus        79 ~~~~~----~~~~~D~vi~~a~~~~~~----~~~~---------~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~  140 (303)
                      +++.+    .+.++|++||+||..+..    ....         ...+.+.-+..++..+.+. ...+++ ++=..... 
T Consensus        75 ~~~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VGFaaEt~-  152 (226)
T 1u7z_A           75 LEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VGFAAETN-  152 (226)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EEEEEESS-
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EEcchhhc-
Confidence            65544    345699999999963211    0111         1223344445677766653 222332 22111111 


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeee-cCCCceeeCceeHHHH
Q psy4233         141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVY-KKGEETIKQPVYVGDV  219 (303)
Q Consensus       141 ~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dv  219 (303)
                               +    ..-.+.+.+...++++++..+-.-  ++..+...       .. .+.++ .++... ....+-+++
T Consensus       153 ---------~----l~e~A~~kL~~k~~d~ivaN~~~~--~~~~f~~~-------~n-~v~li~~~~~~~-~~~~sK~~v  208 (226)
T 1u7z_A          153 ---------N----VEEYARQKRIRKNLDLICANDVSQ--PTQGFNSD-------NN-ALHLFWQDGDKV-LPLERKELL  208 (226)
T ss_dssp             ---------S----HHHHHHHHHHHHTCSEEEEEECSS--TTSSTTSS-------EE-EEEEEETTEEEE-EEEEEHHHH
T ss_pred             ---------h----HHHHHHHHHHhcCCCEEEEeeccc--cCCccCCC-------ce-EEEEEeCCCcEe-cCCCCHHHH
Confidence                     1    122234455667999999887431  11111111       11 22222 222222 445788899


Q ss_pred             HHHHHHHhc
Q psy4233         220 AAAIVAACK  228 (303)
Q Consensus       220 a~~~~~~~~  228 (303)
                      |+.++..+.
T Consensus       209 A~~I~~~i~  217 (226)
T 1u7z_A          209 GQLLLDEIV  217 (226)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            998887764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.34  E-value=1.6e-06  Score=68.46  Aligned_cols=97  Identities=8%  Similarity=-0.020  Sum_probs=70.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH--hcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA--IKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~D~vi   92 (303)
                      +.+++|+|+|+ |.+|+.+++.|.+. |++|++++|++.. .+.+..    .+++.+.+|.++.+.+.++  +.++|+||
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~-~~~~~~----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEA-AQQHRS----EGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHH-HHHHHH----TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHH-HHHHHH----CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            44679999995 99999999999999 9999999997532 222222    2477889999999888876  77899999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcC-CceEEE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIH  131 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~  131 (303)
                      .+.+..             .....++..++..+ ..+++.
T Consensus       111 ~~~~~~-------------~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          111 LAMPHH-------------QGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             ECCSSH-------------HHHHHHHHHHHHTTCCSEEEE
T ss_pred             EeCCCh-------------HHHHHHHHHHHHHCCCCEEEE
Confidence            887531             11224566777766 335553

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.33  E-value=1e-06  Score=76.75  Aligned_cols=100  Identities=17%  Similarity=0.059  Sum_probs=62.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC------CeEEEeecCCC--ccccc-chhcCCCCceEEEecCCCCHHHHHHHhc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG------SQIIIPYRGNF--YDVRD-LRLCGDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g------~~V~~~~R~~~--~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      |+||||+|.||||++|+.+++.|++++      .+++++.++..  +..+. .........+.+.  |+ +.+    .+.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~~----~~~   79 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EAA----VLG   79 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CHH----HHT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CHH----Hhc
Confidence            456899999999999999999999987      37777764322  11111 0000000112221  22 233    356


Q ss_pred             ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          87 YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ++|+||.|++...              ++.++..+ +.|+ ++|-+|+..-.
T Consensus        80 ~~DvVf~alg~~~--------------s~~~~~~~-~~G~-~vIDlSa~~R~  115 (352)
T 2nqt_A           80 GHDAVFLALPHGH--------------SAVLAQQL-SPET-LIIDCGADFRL  115 (352)
T ss_dssp             TCSEEEECCTTSC--------------CHHHHHHS-CTTS-EEEECSSTTTC
T ss_pred             CCCEEEECCCCcc--------------hHHHHHHH-hCCC-EEEEECCCccC
Confidence            8999999987542              23567777 7786 78888877643

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.26  E-value=3.8e-07  Score=79.07  Aligned_cols=112  Identities=15%  Similarity=0.160  Sum_probs=74.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccc--hhc-CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDL--RLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~--~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      |+++||.|+||+|+||+.++..++..|  .+|.+++..... .+..  .+. ...+.     .++.-..+..+.++++|+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k-~~g~a~DL~~~~~~~-----~~i~~t~d~~~al~dADv   79 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVG-LEGVAEEIRHCGFEG-----LNLTFTSDIKEALTDAKY   79 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHH-HHHHHHHHHHHCCTT-----CCCEEESCHHHHHTTEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchh-HHHHHHhhhhCcCCC-----CceEEcCCHHHHhCCCCE
Confidence            567899999999999999999999988  589999885321 1110  000 00010     111112345567899999


Q ss_pred             EEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCce--EEEEe
Q psy4233          91 VINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEK--FIHIS  133 (303)
Q Consensus        91 vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~v~~S  133 (303)
                      ||.++|...  .....+....|....+.+++.+.+...+-  ++.+|
T Consensus        80 VvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           80 IVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             EEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            999998632  23455678899999999999999887543  45554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.18  E-value=2.6e-06  Score=70.04  Aligned_cols=93  Identities=13%  Similarity=0.117  Sum_probs=69.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++++.. .+.+.     .+++++.+|.+|++.+.++ ++++|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~-~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-KKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGH-HHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHH-HHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            568999997 9999999999999999 9999886432 22222     3588999999999999877 788999998865


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCc-eEEE
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVE-KFIH  131 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~  131 (303)
                      ..         +.|.    .++..+++.+.+ ++|-
T Consensus        81 ~d---------~~n~----~~~~~a~~~~~~~~iia  103 (234)
T 2aef_A           81 SD---------SETI----HCILGIRKIDESVRIIA  103 (234)
T ss_dssp             CH---------HHHH----HHHHHHHHHCSSSEEEE
T ss_pred             Cc---------HHHH----HHHHHHHHHCCCCeEEE
Confidence            31         1222    466677777764 5553

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.17  E-value=4.8e-06  Score=62.69  Aligned_cols=74  Identities=22%  Similarity=0.181  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++.. .+.+..    .++.++.+|.++++.+.++ +.++|+||-+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~-~~~~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR-VDELRE----RGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-HHHHHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH-HHHHHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            458999996 999999999999999999999997543 222222    3588999999999988875 567999998876


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus        81 ~   81 (140)
T 3fwz_A           81 N   81 (140)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.12  E-value=1.2e-05  Score=69.91  Aligned_cols=99  Identities=13%  Similarity=0.063  Sum_probs=60.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +|+||+|.||||++|+.+++.|.+++ .+++++.+......+.....+...+..  ...+.+.+   + +.++|+||.++
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~--~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRT--NLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTC--CCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcc--cccccchh---H-hcCCCEEEEcC
Confidence            36799999999999999999999876 488877664322111111111001100  11122332   2 47899999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      +...              .+.++..+.++|+ ++|-.|+..
T Consensus        77 g~~~--------------s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           77 PHGV--------------FAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             CTTH--------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred             CcHH--------------HHHHHHHHHHCCC-EEEEcCccc
Confidence            7531              2346666777787 688777754

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=98.11  E-value=5.2e-06  Score=72.59  Aligned_cols=101  Identities=13%  Similarity=0.067  Sum_probs=61.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |+++||+|.||+|++|+.+++.|.+++ .+++++.+............+...+..  ..|+...+  .+.++++|+||.|
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~a   89 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCC   89 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEEC
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEc
Confidence            345799999999999999999999886 488887664322111110111111110  13332222  3355689999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ++...              ++..+..+ ++|+ ++|-.|+..
T Consensus        90 tp~~~--------------s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGT--------------TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CCTTT--------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             CCchh--------------HHHHHHHH-hCCC-EEEECCccc
Confidence            87532              22455666 6676 677777654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.06  E-value=1.1e-05  Score=69.42  Aligned_cols=110  Identities=16%  Similarity=0.138  Sum_probs=74.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc---cch-hcCCC-CceEEEecCCCCHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR---DLR-LCGDL-GQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      ..++||.|+|+ |.+|+.++..|+..|.  +|++++++......   .+. ..... ..+.....|   .    +.++++
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~a   74 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKDA   74 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCCC
Confidence            34679999996 9999999999999985  89999886432111   011 00001 234443332   2    357899


Q ss_pred             CEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          89 NVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        89 D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |+||.++|...  .....+....|....+.+++.+.+...+ .++.+|
T Consensus        75 DvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           75 DIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            99999998642  2345567888999999999999987754 455444

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.04  E-value=1.9e-06  Score=72.47  Aligned_cols=39  Identities=21%  Similarity=0.216  Sum_probs=30.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGN   52 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~   52 (303)
                      |++.+|||+|+|++|.+|+.+++++.+ .++++++..+.+
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            345668999999999999999999885 468887554443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.98  E-value=3.8e-05  Score=66.48  Aligned_cols=121  Identities=12%  Similarity=0.078  Sum_probs=75.1

Q ss_pred             CCCCcccCCCcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcc-cccchh--c-CCCCc-eEEEecCCC
Q psy4233           9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYD-VRDLRL--C-GDLGQ-VLFQPYHPR   76 (303)
Q Consensus         9 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~-~~~~~~--~-~~~~~-~~~~~~Dl~   76 (303)
                      .+....+|+.-||.|+||+|.||+.++-.|....       .++.+++..+... .+....  . ...+. ...+..+  
T Consensus        15 ~~~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--   92 (345)
T 4h7p_A           15 QTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--   92 (345)
T ss_dssp             -------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--
T ss_pred             cccCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--
Confidence            3444456777799999999999999998887654       2677877653211 111110  0 01111 2222222  


Q ss_pred             CHHHHHHHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEec
Q psy4233          77 NDDEIRKAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMG-VE-KFIHISA  134 (303)
Q Consensus        77 d~~~~~~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss  134 (303)
                      |   ..+.++++|+||-+||..  ....+.+.++.|....+.+.+++.+.. .. +++.+|.
T Consensus        93 ~---~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           93 D---PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             C---HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C---hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            2   346789999999999963  334667899999999999999988753 22 5555554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.97  E-value=4.1e-06  Score=71.88  Aligned_cols=109  Identities=15%  Similarity=0.105  Sum_probs=69.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--hcCC----CCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--LCGD----LGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      +|||.|+|| |.+|+.++..|+..|+ +|.+++++.... +...  +...    ....++...  .|   . +.++++|+
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~   73 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP-QGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDV   73 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHH-HHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHH-HHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCE
Confidence            479999998 9999999999999996 888888764322 1111  0000    011111110  12   2 45789999


Q ss_pred             EEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          91 VINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        91 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ||.++|....  ....+....|....+.+++.+.+...+.++.+.|
T Consensus        74 Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            9999986422  2233556778888889999999887665655544

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.97  E-value=2.5e-05  Score=67.14  Aligned_cols=110  Identities=15%  Similarity=0.092  Sum_probs=65.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc---cch-hcCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR---DLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      .+++||.|+|| |.+|+.++..|+..|.  ++.+++++......   .+. .......+.+...|   .    +.++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhcCCC
Confidence            34689999996 9999999999999885  89999885432110   000 00001234444332   2    3578999


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +||.++|...  .....+..+.|....+.+++.+.++..+ .++.+|
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            9999999632  2345577888999999999999987754 444444

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.94  E-value=1.2e-05  Score=69.74  Aligned_cols=93  Identities=13%  Similarity=0.145  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +|||+|.||||++|+.+++.|.++++   +++++. |+....  .+...+  ..+.+.  |+ +++    .++++|+||.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~--~~~~~g--~~i~~~--~~-~~~----~~~~~DvV~~   74 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ--RMGFAE--SSLRVG--DV-DSF----DFSSVGLAFF   74 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC--EEEETT--EEEECE--EG-GGC----CGGGCSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC--ccccCC--cceEEe--cC-CHH----HhcCCCEEEE
Confidence            47999999999999999999996653   556554 322211  111100  112222  22 222    2568999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      +.+..              .++.++..+.++|+ ++|-+|+..
T Consensus        75 a~g~~--------------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           75 AAAAE--------------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             cCCcH--------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            98742              13357777788888 577777665

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.93  E-value=2.8e-05  Score=65.10  Aligned_cols=93  Identities=17%  Similarity=0.177  Sum_probs=56.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEE-eecCCCccc-ccc-hhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIII-PYRGNFYDV-RDL-RLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~-~~R~~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |+|+||.|+||+|.+|+.+++.+.+. +.++.+ ++|+..... ... ...+..+       ++.-.+++.+++.++|+|
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~-------gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT-------GVALTDDIERVCAEADYL   77 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC-------SCBCBCCHHHHHHHCSEE
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC-------CceecCCHHHHhcCCCEE
Confidence            56789999999999999999999876 477776 466532211 100 0111001       122223455566689999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      |++..+              ......++.|.++|+ ++|
T Consensus        78 IDfT~p--------------~a~~~~~~~al~~G~-~vV  101 (272)
T 4f3y_A           78 IDFTLP--------------EGTLVHLDAALRHDV-KLV  101 (272)
T ss_dssp             EECSCH--------------HHHHHHHHHHHHHTC-EEE
T ss_pred             EEcCCH--------------HHHHHHHHHHHHcCC-CEE
Confidence            998632              123356777777787 555

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.93  E-value=1.6e-05  Score=68.16  Aligned_cols=113  Identities=12%  Similarity=0.070  Sum_probs=75.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCC-Ccccccch--hcCC----CCceEEEecCCCCHHHHHHHh
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGN-FYDVRDLR--LCGD----LGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~-~~~~~~~~--~~~~----~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      |.|+++||.|+|+ |.+|+.++..|+..|+ +|+++++++ ....+...  +...    .....+...  .|.    +.+
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~----~a~   76 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY----ADT   76 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH----HHh
Confidence            4456679999997 9999999999999998 999999973 22111110  0000    001111111  122    467


Q ss_pred             cccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          86 KYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        86 ~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +++|+||.++|...  .....+.++.|....+.+.+.+.+.... .++.+|
T Consensus        77 ~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            89999999998642  2345678888999999999999887654 555554

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.93  E-value=3.8e-05  Score=65.72  Aligned_cols=112  Identities=17%  Similarity=0.127  Sum_probs=73.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-C--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-G--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |||.|+||+|.||+.++..|..+ +  .++.++++.+........+........+... ..  +...+.++++|+||.++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~a   77 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLISA   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEeC
Confidence            69999999999999999999875 5  5789988865111111111111111222111 00  11234678999999999


Q ss_pred             ccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          96 GREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        96 ~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |...  ...+.+.++.|....+.+.+.+.+...+ .++.+|
T Consensus        78 g~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           78 GVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             SCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9642  2456678899999999999999887654 555554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.93  E-value=1.6e-05  Score=69.91  Aligned_cols=105  Identities=14%  Similarity=0.104  Sum_probs=68.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+.+++|+|+|+ |.+|..+++.|...|.+|++++|++... +.... .+    .. +.+|..+.+++.+.++++|+||+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~-~~~~~~~g----~~-~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL-QYLDDVFG----GR-VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHTT----TS-EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHhcC----ce-EEEecCCHHHHHHHHhCCCEEEE
Confidence            466789999999 9999999999999999999999975322 22211 11    11 44566778889999999999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +++......+.       ......++.++..  ..+|.+|+.
T Consensus       236 ~~g~~~~~~~~-------li~~~~l~~mk~g--g~iV~v~~~  268 (369)
T 2eez_A          236 AVLVPGAKAPK-------LVTRDMLSLMKEG--AVIVDVAVD  268 (369)
T ss_dssp             CCC-------C-------CSCHHHHTTSCTT--CEEEECC--
T ss_pred             CCCCCccccch-------hHHHHHHHhhcCC--CEEEEEecC
Confidence            99864211111       1122344444432  368888754

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.92  E-value=1.8e-06  Score=69.88  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=49.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |+|+|+||+|.+|+.+++.|++.|++|++++|++... +.+... +.  .+.  ..|+. .+++.+.++++|+||++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA-EAKAAEYRR--IAG--DASIT-GMKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH-HHHHHHHHH--HHS--SCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhcc--ccc--cCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence            5899999999999999999999999999999974332 211110 00  000  01221 23355667889999999863

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.89  E-value=1.7e-05  Score=67.90  Aligned_cols=82  Identities=21%  Similarity=0.236  Sum_probs=58.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCC--cccccch-hcCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNF--YDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~--~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ++.+++++|+|| |.+|+.++.+|.+.|. +|+++.|+..  +..+.+. .........+...++.+.+++.+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            456889999997 8999999999999997 8999999732  1222111 111001133444566777888888899999


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      ||++.+.
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9999864

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.88  E-value=5e-06  Score=71.54  Aligned_cols=110  Identities=16%  Similarity=0.143  Sum_probs=72.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc---cch-h--cCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR---DLR-L--CGDLGQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~---~~~-~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      |+++||.|+|| |.+|+.++..|+..|+ +|+++++++.....   .+. .  ... ....+...  .|.    +.++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~-~~~~v~~t--~d~----~a~~~a   76 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDG-FDAKFTGA--NDY----AAIEGA   76 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-CCCCEEEE--SSG----GGGTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcC-CCCEEEEe--CCH----HHHCCC
Confidence            56789999998 9999999999999998 99999987643210   010 0  000 11222211  122    467899


Q ss_pred             CEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          89 NVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        89 D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |+||.++|...  .....+....|....+.+++.+.+.... .++.+|
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999998632  2344567788999999999999887754 555555

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.86  E-value=1.1e-05  Score=69.86  Aligned_cols=109  Identities=14%  Similarity=0.086  Sum_probs=71.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chh------cCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRL------CGDLGQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      ++|||.|+|| |.+|..++..|...|+ +|.+++++....... ...      .....++..       ..++.+.++++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~a   79 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGA   79 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCC
Confidence            3579999998 9999999999999998 999998875322110 110      000111111       12344578899


Q ss_pred             CEEEEccccCcc--c-----cchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          89 NVVINLIGREFA--T-----KNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        89 D~vi~~a~~~~~--~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      |+||.++|....  .     ........|....+.+++.+.+...+-++...
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  131 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  131 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            999999975321  2     34456667888888899998887654444433

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.86  E-value=7.3e-05  Score=64.27  Aligned_cols=110  Identities=13%  Similarity=0.183  Sum_probs=70.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc-cchhcC---CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR-DLRLCG---DLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~-~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      +++||.|+|| |.+|..++..|+..+.  +|.+++.+...... ...+..   ....+++. .  .+    .+.++++|+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv   77 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV   77 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence            4579999998 9999999999999886  89999986432211 111110   01123222 1  12    335889999


Q ss_pred             EEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          91 VINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        91 vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ||.+++...  .....+....|....+.+++.+.+....-+|.+.|
T Consensus        78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999998642  22344667888888999999998876554444443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.84  E-value=5.3e-05  Score=67.55  Aligned_cols=74  Identities=19%  Similarity=0.161  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .++|+|+|. |.+|+.+++.|.+.|++|+++++++.. .+....    .++.++.+|.++++.+.++ +.++|+||-+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~-v~~~~~----~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH-IETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH-HHHHHH----TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH-HHHHHh----CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            468999996 999999999999999999999997542 232222    3578899999999999887 778999998875


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.83  E-value=3.6e-05  Score=69.69  Aligned_cols=75  Identities=19%  Similarity=0.281  Sum_probs=59.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a   95 (303)
                      +.|+|+|.|+ |.+|+++++.|.++||+|+++++++. ..+.+...   -++..+.||-++++.+.++ ++++|.+|-+.
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~-~~~~~~~~---~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t   76 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGD-RLRELQDK---YDLRVVNGHASHPDVLHEAGAQDADMLVAVT   76 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHH-HHHHHHHH---SSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHHh---cCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence            4689999997 99999999999999999999988743 22222211   2488999999999999986 56699998664


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus        77 ~   77 (461)
T 4g65_A           77 N   77 (461)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.83  E-value=2e-05  Score=62.87  Aligned_cols=99  Identities=20%  Similarity=0.186  Sum_probs=63.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH---HHHHhc--ccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE---IRKAIK--YSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~--~~D~v   91 (303)
                      .+++|+|+||+|.+|..+++.+...|.+|++++|+... .+..+..+    ... ..|..+.+.   +.+...  ++|+|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~-~~~~~~~g----~~~-~~d~~~~~~~~~~~~~~~~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLSRLG----VEY-VGDSRSVDFADEILELTDGYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHTTC----CSE-EEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcC----CCE-EeeCCcHHHHHHHHHHhCCCCCeEE
Confidence            36799999999999999999999999999999886432 22222211    211 235555433   333332  48999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      |+++|..              .....++.++..|  ++|.+++...
T Consensus       112 i~~~g~~--------------~~~~~~~~l~~~G--~~v~~g~~~~  141 (198)
T 1pqw_A          112 LNSLAGE--------------AIQRGVQILAPGG--RFIELGKKDV  141 (198)
T ss_dssp             EECCCTH--------------HHHHHHHTEEEEE--EEEECSCGGG
T ss_pred             EECCchH--------------HHHHHHHHhccCC--EEEEEcCCCC
Confidence            9998731              1123444444443  8888877553

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.80  E-value=0.00012  Score=62.87  Aligned_cols=111  Identities=16%  Similarity=0.082  Sum_probs=74.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chhcCC----CCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRLCGD----LGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |.++||.|+|+ |.+|+.++..|+..|. +|.++++++...... ..+...    .....+...  .|.    +.++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCCC
Confidence            55789999995 9999999999999887 999999876432110 001000    011222211  122    4678999


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +||.++|...  .....+....|....+.+++.+.+.... .++.+|
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999998642  2344567788999999999999888754 555554

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.78  E-value=0.00011  Score=63.98  Aligned_cols=94  Identities=16%  Similarity=0.218  Sum_probs=57.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++||+|.||||++|+.+++.|.++++   ++..++.+ .+.-..+...+  ....+...|   .+    .++++|+||.|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-~saG~~~~~~~--~~~~~~~~~---~~----~~~~~Dvvf~a   71 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSLKFKD--QDITIEETT---ET----AFEGVDIALFS   71 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-TTTTCEEEETT--EEEEEEECC---TT----TTTTCSEEEEC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-ccCCCcceecC--CCceEeeCC---HH----HhcCCCEEEEC
Confidence            57999999999999999999998765   34444332 11111111111  122232233   11    24689999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ++..              .++.++..+.+.|+ ++|=.|+..
T Consensus        72 ~~~~--------------~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           72 AGSS--------------TSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             SCHH--------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CChH--------------hHHHHHHHHHHCCC-EEEEcCCcc
Confidence            8742              12345666667787 677777754

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.77  E-value=0.0001  Score=64.41  Aligned_cols=98  Identities=10%  Similarity=0.146  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCC---------CceEEEecCCCCHHHHHHHhc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDL---------GQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~---------~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ++||+|.||||++|+.+++.|.+++ .+|+++.++..+....+. ..+..         ..+.+...   |++.   .++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~   81 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPKH---EEF   81 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTTS---GGG
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHHH---Hhc
Confidence            5799999999999999999999875 688888754322211111 00100         01111111   2222   335


Q ss_pred             -ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          87 -YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        87 -~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                       ++|+||.+.+..              ....++..+.++|+ ++|-.|+..
T Consensus        82 ~~~DvV~~atp~~--------------~~~~~a~~~~~aG~-~VId~s~~~  117 (354)
T 1ys4_A           82 EDVDIVFSALPSD--------------LAKKFEPEFAKEGK-LIFSNASAY  117 (354)
T ss_dssp             TTCCEEEECCCHH--------------HHHHHHHHHHHTTC-EEEECCSTT
T ss_pred             CCCCEEEECCCch--------------HHHHHHHHHHHCCC-EEEECCchh
Confidence             899999998642              12245666667787 566555543

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.70  E-value=8e-05  Score=64.89  Aligned_cols=97  Identities=11%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCC---------CceEEEecCCCCHHHHHHHh
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDL---------GQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~---------~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      +++||.|.||||++|+.+++.|.++. .+++++..+..+....+. ..+..         ..+.+  .|+ |++.    +
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~   75 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----H   75 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----G
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----h
Confidence            46799999999999999999998865 578877521111111111 00100         01222  222 3332    3


Q ss_pred             cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          86 KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        86 ~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +++|+||.|.+..              ....++..+.++|+ ++|-.|+.
T Consensus        76 ~~vDvVf~atp~~--------------~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           76 KDVDVVLSALPNE--------------LAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             TTCSEEEECCCHH--------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             cCCCEEEECCChH--------------HHHHHHHHHHHCCC-EEEECCcc
Confidence            6899999887642              13357777778887 56665654

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.69  E-value=0.00012  Score=63.29  Aligned_cols=95  Identities=19%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +|+||+|.||||++|+.+++.|.+++   .+++++....... ..+...+  ..+.+...|   ++    .++++|+||.
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G-~~~~~~~--~~i~~~~~~---~~----~~~~vDvVf~   71 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEG-KTYRFNG--KTVRVQNVE---EF----DWSQVHIALF   71 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTT-CEEEETT--EEEEEEEGG---GC----CGGGCSEEEE
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCC-CceeecC--ceeEEecCC---hH----HhcCCCEEEE
Confidence            36899999999999999999999873   5677776321111 1111111  123332222   22    3468999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      |.+..              .++..+..+.++|+ ++|-.|+..
T Consensus        72 a~g~~--------------~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           72 SAGGE--------------LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCCch--------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence            98753              13356677777787 677777764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.68  E-value=0.00018  Score=60.95  Aligned_cols=108  Identities=17%  Similarity=0.082  Sum_probs=73.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCccc-cc--c-hhcC-CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDV-RD--L-RLCG-DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~-~~--~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|| |.+|+.++..|+..|+  +|.++++++.... ..  + .... ......+...  .|    .+.++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            69999999 9999999999999987  8999998753321 00  0 0000 0011222222  12    3467899999


Q ss_pred             EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.++|...  .....+....|....+.+++.+.+.+.. .++.+|
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99998642  2345577888999999999999988754 555444

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.68  E-value=5e-05  Score=65.88  Aligned_cols=92  Identities=11%  Similarity=0.099  Sum_probs=69.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .++++|+|+ |.+|+.++++|.++|+ |+++++++... + ...    .++.++.+|.+|++.+.++ ++++|.|+-+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~-~-~~~----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-K-VLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH-H-HHH----TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh-h-HHh----CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            458999996 9999999999999999 99988865432 2 222    4689999999999999987 788999998764


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCc-eEE
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVE-KFI  130 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v  130 (303)
                      ..         +.|+    .++..+++.+.+ +++
T Consensus       187 ~d---------~~n~----~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          187 SD---------SETI----HCILGIRKIDESVRII  208 (336)
T ss_dssp             SH---------HHHH----HHHHHHHTTCTTSEEE
T ss_pred             cc---------HHHH----HHHHHHHHHCCCCeEE
Confidence            21         1122    466777777764 544

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.67  E-value=0.00015  Score=62.68  Aligned_cols=99  Identities=19%  Similarity=0.170  Sum_probs=59.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCC--cccccch-h---cCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNF--YDVRDLR-L---CGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~--~~~~~~~-~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      |+||+|+||||++|+.+++.|.++. +++..+.++..  +.-..+. .   ........+...  .+.+   ++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            5799999999999999999999854 68887755431  1111111 0   111111222222  0222   22268999


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ||.|.+..              .++.++..+.+.|+ ++|=.|+..
T Consensus        79 vf~a~p~~--------------~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           79 VFLATAHE--------------VSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             EEECSCHH--------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEECCChH--------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99987642              12345666667787 778777764

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.65  E-value=0.00021  Score=61.37  Aligned_cols=111  Identities=14%  Similarity=0.147  Sum_probs=72.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc---cc-hhcCCC-CceEEEecCCCCHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR---DL-RLCGDL-GQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~---~~-~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      |++|||.|+|| |.+|+.++..|+.+|  .+|.+++.+......   .+ ...... ..+++.. |  +    .+.++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence            45679999998 999999999999888  488888875321110   00 000001 1233332 2  2    3457899


Q ss_pred             CEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          89 NVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        89 D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      |+||.+++...  ..........|....+.+++.+.+....-++.+.|
T Consensus        76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999998742  23334567888888899999998886554444433

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.64  E-value=0.00013  Score=61.84  Aligned_cols=108  Identities=17%  Similarity=0.061  Sum_probs=72.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc-ccchhc---C-CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV-RDLRLC---G-DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|| |.||+.++-.|+.++  .++.+++..+.... ....+.   . ..........+  |.+    .++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----HhCCCCEE
Confidence            79999996 999999999999887  57888887642110 000000   0 00112222221  333    47899999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      |-.||..  ....+.+.++.|....+.+++.+.++..+-++.+-
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvv  117 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence            9999963  33566789999999999999999988765444443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.59  E-value=4.2e-05  Score=65.87  Aligned_cols=108  Identities=11%  Similarity=0.069  Sum_probs=68.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--hcC----CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--LCG----DLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ++||.|+|| |.+|..++..|+..|+ +|.+++++.... +...  ...    ......+...  .|   + +.++++|+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l-~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~   75 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP-HGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADV   75 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH-HHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCE
Confidence            579999998 9999999999999997 888888864322 1100  000    0011111110  12   2 45789999


Q ss_pred             EEEccccCcc--cc-----chhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          91 VINLIGREFA--TK-----NFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        91 vi~~a~~~~~--~~-----~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ||.+++....  ..     ..+....|....+.+++.+.+.... .++.+|
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999975321  11     3455666777788888888877544 444443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.59  E-value=0.00022  Score=60.99  Aligned_cols=108  Identities=17%  Similarity=0.118  Sum_probs=71.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc---cch-h-cCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR---DLR-L-CGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|+ |.+|+.++..|+..|.  +|.++++++.....   .+. . ........+...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            69999997 9999999999999885  89999987643210   000 0 0000112222122  2    2467899999


Q ss_pred             EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.++|...  .....+....|....+.+++.+.+.... .++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            99998642  2345678889999999999999988754 455444

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.59  E-value=0.00028  Score=61.89  Aligned_cols=102  Identities=15%  Similarity=0.144  Sum_probs=58.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCC---------CceEEEecCCCCHHHHHHH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDL---------GQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~---------~~~~~~~~Dl~d~~~~~~~   84 (303)
                      |+++||.|.||||++|+.+++.|.++. .++..+..+..+.-..+. .....         ....+...|..+      .
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~------~   90 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEG------N   90 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT------T
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhh------h
Confidence            567899999999999999999888876 567655322221111111 00000         112222222110      2


Q ss_pred             hcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          85 IKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        85 ~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ++++|+||.|++..              .++.++..+.+.|+ ++|=.|+..-.
T Consensus        91 ~~~~Dvvf~alp~~--------------~s~~~~~~~~~~G~-~VIDlSa~fR~  129 (381)
T 3hsk_A           91 FLECDVVFSGLDAD--------------VAGDIEKSFVEAGL-AVVSNAKNYRR  129 (381)
T ss_dssp             GGGCSEEEECCCHH--------------HHHHHHHHHHHTTC-EEEECCSTTTT
T ss_pred             cccCCEEEECCChh--------------HHHHHHHHHHhCCC-EEEEcCCcccC
Confidence            46899999997642              12346666667787 67777766543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.58  E-value=0.00032  Score=57.72  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=28.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRG   51 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~   51 (303)
                      |||+|+|++|.+|+.+++++.+. ++++.+....
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~   34 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA   34 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence            58999999999999999999875 7998877654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.57  E-value=0.00025  Score=61.11  Aligned_cols=110  Identities=15%  Similarity=0.064  Sum_probs=75.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc---cch---hcCCCCceEEEecCCCCHHHHHHHhc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR---DLR---LCGDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      +..++||.|+|| |.+|+.++..|+.+|.  ++.+++++......   .+.   ...  .....+..+  |.+    .++
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~--~~~~i~~~~--d~~----~~~   86 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL--KTPKIVSSK--DYS----VTA   86 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC--SCCEEEECS--SGG----GGT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc--CCCeEEEcC--CHH----HhC
Confidence            345789999997 9999999999999885  89999886421111   011   011  112222221  332    478


Q ss_pred             ccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          87 YSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        87 ~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ++|+||.++|..  ....+.+..+.|....+.+.+.+.++... .++.+|
T Consensus        87 ~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           87 NSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             TEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999999964  23456688999999999999999988654 555555

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.54  E-value=0.00023  Score=61.11  Aligned_cols=107  Identities=15%  Similarity=0.172  Sum_probs=68.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc-cchhc---CCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR-DLRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~-~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +||.|+|| |.+|+.++..|+..+.  ++.++++....... ...+.   .....+++.. |  +    .+.++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            69999998 9999999999998874  89999885322111 00000   0012333332 2  2    34588999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      .+++...  .....+....|....+.+++.+.+.... .++.+|
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            9998632  2233467778889999999999888754 455443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.54  E-value=0.00012  Score=63.84  Aligned_cols=75  Identities=21%  Similarity=0.153  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHH----HHHhc-ccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI----RKAIK-YSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~----~~~~~-~~D~v   91 (303)
                      .+++|||+||+|.+|..+++.+...|.+|++++|+.... +..+..+    ... ..|+.+.+++    .+... ++|+|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g----~~~-~~d~~~~~~~~~~~~~~~~~~~D~v  242 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIG----GEV-FIDFTKEKDIVGAVLKATDGGAHGV  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTT----CCE-EEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcC----Cce-EEecCccHhHHHHHHHHhCCCCCEE
Confidence            367999999999999999999999999999999875432 2222221    211 2355533223    23222 58999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      |+++|.
T Consensus       243 i~~~g~  248 (347)
T 2hcy_A          243 INVSVS  248 (347)
T ss_dssp             EECSSC
T ss_pred             EECCCc
Confidence            999874

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.53  E-value=0.00019  Score=62.75  Aligned_cols=97  Identities=12%  Similarity=0.100  Sum_probs=56.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK-QGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~-~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |+||.|.||||++|+.+++++++ +++   +++.+..+...  .......   +......|..|++.    ++++|+||.
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G--~~v~~~~---g~~i~~~~~~~~~~----~~~~DvVf~   71 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG--QAAPSFG---GTTGTLQDAFDLEA----LKALDIIVT   71 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCGGG---TCCCBCEETTCHHH----HHTCSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC--CCccccC---CCceEEEecCChHH----hcCCCEEEE
Confidence            47999999999999999995444 443   55666554211  1111010   11222223445554    358999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      |.+..              .++.++..+.++|.++ +.++..+.+
T Consensus        72 a~g~~--------------~s~~~a~~~~~~G~k~-vVID~ss~~  101 (367)
T 1t4b_A           72 CQGGD--------------YTNEIYPKLRESGWQG-YWIDAASSL  101 (367)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTCCC-EEEECSSTT
T ss_pred             CCCch--------------hHHHHHHHHHHCCCCE-EEEcCChhh
Confidence            98742              2335666777778743 334444443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.50  E-value=0.0002  Score=63.09  Aligned_cols=77  Identities=18%  Similarity=0.151  Sum_probs=55.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+.+++|+|+|+ |-+|+.+++.+...|.+|++++|+.... +.... .+  ..+   ..+..+.+++.+.++++|+||.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l-~~~~~~~g--~~~---~~~~~~~~~l~~~l~~aDvVi~  237 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL-RQLDAEFC--GRI---HTRYSSAYELEGAVKRADLVIG  237 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHTT--TSS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhcC--Cee---EeccCCHHHHHHHHcCCCEEEE
Confidence            466889999998 9999999999999999999999875332 21111 11  111   1223456678888889999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +++..
T Consensus       238 ~~~~p  242 (377)
T 2vhw_A          238 AVLVP  242 (377)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            98754

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.50  E-value=0.00031  Score=58.17  Aligned_cols=104  Identities=13%  Similarity=0.102  Sum_probs=67.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCc------------------cccc----chhcCCCCceEEEec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFY------------------DVRD----LRLCGDLGQVLFQPY   73 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~------------------~~~~----~~~~~~~~~~~~~~~   73 (303)
                      ..++|+|+|+ |.+|+.+++.|.+.|. +++++++..-+                  +.+.    +......-+++.+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4679999996 8999999999999995 88888886411                  1110    000000113556666


Q ss_pred             CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ++. .+.+.+.++++|+||.+....             ..-..+.+++++.++ .+|..+..+
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d~~-------------~~~~~l~~~~~~~~~-p~i~~~~~g  156 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTDNV-------------AVRNQLNAGCFAAKV-PLVSGAAIR  156 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCSSH-------------HHHHHHHHHHHHHTC-CEEEEEEEB
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCCCH-------------HHHHHHHHHHHHcCC-CEEEeeecc
Confidence            664 456777889999999986421             112246677777776 566655443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.49  E-value=9.6e-05  Score=63.95  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH----HHHHHhc-ccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD----EIRKAIK-YSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~----~~~~~~~-~~D~v   91 (303)
                      .+++|+|+||+|.||..+++.+...|.+|++++|+... .+..+..+    .. ...|..+.+    .+.+... ++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~-~~~~~~~g----~~-~~~d~~~~~~~~~~~~~~~~~~~d~v  218 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-IAYLKQIG----FD-AAFNYKTVNSLEEALKKASPDGYDCY  218 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTT----CS-EEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcC----Cc-EEEecCCHHHHHHHHHHHhCCCCeEE
Confidence            36799999999999999999999999999999886432 22222221    11 123555422    2222222 48999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      |+++|.
T Consensus       219 i~~~g~  224 (333)
T 1v3u_A          219 FDNVGG  224 (333)
T ss_dssp             EESSCH
T ss_pred             EECCCh
Confidence            999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.48  E-value=0.00039  Score=59.12  Aligned_cols=37  Identities=22%  Similarity=0.326  Sum_probs=32.1

Q ss_pred             CCCcE-EEEE-cCC-----------------ChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          16 FNGVV-ATVF-GAS-----------------GYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~-vlVt-Gat-----------------G~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..+++ |||| |+|                 |..|.+++++++++|++|+.+.|..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            35667 9998 667                 9999999999999999999999864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.48  E-value=0.00053  Score=60.37  Aligned_cols=70  Identities=13%  Similarity=0.202  Sum_probs=55.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.+++|+|+|+ |.+|..+++++.+.|++|++++..+.......       --+.+..|..|.+.+.++.+.+|+|..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            45779999996 99999999999999999999987654322221       135677899999999999999998854

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.47  E-value=2.3e-05  Score=59.22  Aligned_cols=71  Identities=14%  Similarity=0.097  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|+...........+    +...     ..+++.+.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~----~~~~-----~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE----YEYV-----LINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT----CEEE-----ECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC----CceE-----eecCHHHHhcCCCEEEEeCCC
Confidence            679999996 999999999999999999888887543222111111    2222     122345567889999999876


Q ss_pred             C
Q psy4233          98 E   98 (303)
Q Consensus        98 ~   98 (303)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.46  E-value=0.00016  Score=61.84  Aligned_cols=83  Identities=11%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCc--ccccch-hcCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFY--DVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~--~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ...+++++|+|| |.+|+.++.+|.+.|. +|+++.|+...  ..+.+. ......+......++.+.+.+.+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            456789999997 8999999999999997 89999997321  111111 110001123333455565455667788999


Q ss_pred             EEEccccC
Q psy4233          91 VINLIGRE   98 (303)
Q Consensus        91 vi~~a~~~   98 (303)
                      ||++.+..
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99997653

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.46  E-value=0.00038  Score=59.43  Aligned_cols=104  Identities=15%  Similarity=0.173  Sum_probs=64.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc-cchhcCC---CCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR-DLRLCGD---LGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~-~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |||.|+|| |.+|..++..|+..|+  +|.+++++...... .......   .....+..   .+.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEEE
Confidence            58999998 9999999999999998  99999987431111 0111000   01222222   122    3578999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      .+++...  .....+....|....+.+++.+.+.....++
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~v  112 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVL  112 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEE
Confidence            9997532  2333456677888888899988877544333

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.45  E-value=0.00041  Score=59.75  Aligned_cols=108  Identities=15%  Similarity=0.106  Sum_probs=70.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccc-cchhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVR-DLRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~-~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      .+||.|+|| |.+|+.++..|+..+.  ++.++++....... ...+.   .....+.+.. |  +    .+.++++|+|
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDvV   80 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADLV   80 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            579999998 9999999999988874  89998885322111 00000   0012333332 2  2    3457899999


Q ss_pred             EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.+++...  ..........|....+.+++.+.+.... .++.+|
T Consensus        81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99998642  2334467778889999999998887654 555443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.43  E-value=0.00021  Score=60.79  Aligned_cols=77  Identities=17%  Similarity=0.073  Sum_probs=53.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++.+++++|+|+ |.+|+.++..|++.|. +|++..|+..+..+.....+....      +..+.+++.+.+.++|+||+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~------~~~~~~~~~~~~~~aDivIn  210 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS------AYFSLAEAETRLAEYDIIIN  210 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC------CEECHHHHHHTGGGCSEEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC------ceeeHHHHHhhhccCCEEEE
Confidence            356789999997 8899999999999997 899999975432222111111000      12234567777888999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +.+..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            99864

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.43  E-value=0.00015  Score=58.68  Aligned_cols=67  Identities=16%  Similarity=0.182  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ++|+|+|+| +|.+|+.+++.|.+.|++|++.+|+... .+.+..    .+++..        ++.+.++++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~-~~~~~~----~g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKR-TARLFP----SAAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHH-HHHHSB----TTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHH----cCCcee--------cHHHHHhCCCEEEECCC
Confidence            567999999 7999999999999999999999987432 222111    123321        24556788999999876


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus        93 ~   93 (215)
T 2vns_A           93 R   93 (215)
T ss_dssp             G
T ss_pred             h
Confidence            4

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.43  E-value=0.00049  Score=57.84  Aligned_cols=93  Identities=19%  Similarity=0.206  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEe-ecCCCccc-ccc-hhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIP-YRGNFYDV-RDL-RLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +++||.|.||+|.+|+.+++.+.+. +.++.+. +|+..... ... ...+    +.  ..++.-.+++.+++.++|+||
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G----~~--~~gv~v~~dl~~ll~~aDVvI   93 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG----SD--FLGVRITDDPESAFSNTEGIL   93 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT----CS--CCSCBCBSCHHHHTTSCSEEE
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc----cC--cCCceeeCCHHHHhcCCCEEE
Confidence            4679999999999999999999875 5776665 55432211 100 1111    00  111222234556777899999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      .+..+.              .+...++.|.++|+ ++|
T Consensus        94 DFT~p~--------------a~~~~~~~~l~~Gv-~vV  116 (288)
T 3ijp_A           94 DFSQPQ--------------ASVLYANYAAQKSL-IHI  116 (288)
T ss_dssp             ECSCHH--------------HHHHHHHHHHHHTC-EEE
T ss_pred             EcCCHH--------------HHHHHHHHHHHcCC-CEE
Confidence            886421              22346667777776 555

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.42  E-value=0.00016  Score=60.64  Aligned_cols=76  Identities=17%  Similarity=0.123  Sum_probs=49.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++.+++++|+|+ |.+|+.++..|++.|.+|++..|+..+..+.....+....+.  ..|+   +++.+  .++|+||++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~--~~~~---~~~~~--~~~DivVn~  187 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQ--ALSM---DELEG--HEFDLIINA  187 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEE--ECCS---GGGTT--CCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCee--EecH---HHhcc--CCCCEEEEC
Confidence            356789999998 789999999999999999999987543222111111111121  2332   22222  579999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      ++..
T Consensus       188 t~~~  191 (271)
T 1nyt_A          188 TSSG  191 (271)
T ss_dssp             CSCG
T ss_pred             CCCC
Confidence            9864

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.42  E-value=0.00024  Score=58.39  Aligned_cols=35  Identities=14%  Similarity=0.200  Sum_probs=28.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRG   51 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~   51 (303)
                      |+||||.|+|+ |.+|+.+++.+.++++++.+. +|+
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            34789999999 999999999999987776664 554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.41  E-value=0.00089  Score=57.50  Aligned_cols=108  Identities=11%  Similarity=-0.043  Sum_probs=72.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCccccc---ch---hcCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRD---LR---LCGDLGQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~---~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      ..+||.|+|+ |.+|+.++..|+..|.  +|.+++++.......   +.   ......++ ....|+   +    .++++
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~---~----~~~da   90 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDY---S----VSAGS   90 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSS---C----SCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCH---H----HhCCC
Confidence            4689999998 9999999999999985  899998864321110   00   11111122 112333   2    26789


Q ss_pred             CEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          89 NVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        89 D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |+||-++|...  ...+.+....|....+.+++.+.+.+.. .++.+|
T Consensus        91 DiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           91 KLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             SEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            99999999642  2445578888999999999999887654 455444

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.39  E-value=0.00046  Score=59.25  Aligned_cols=107  Identities=16%  Similarity=0.195  Sum_probs=69.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccc--hh---cCCC-CceEEEecCCCCHHHHHHHhccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDL--RL---CGDL-GQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~--~~---~~~~-~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      +++||.|+|+ |.+|+.++..|+..|  .+|++++++.. ..+..  .+   .... ..+.+.. |  +    .+.++++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~-~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~a   75 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES-KAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDA   75 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH-HHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcc-hHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCC
Confidence            4679999998 999999999998877  48999998743 22111  11   0000 1233332 1  2    2357899


Q ss_pred             CEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          89 NVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        89 D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      |+||.+++....  ....+....|....+.+++.+.+....-++++
T Consensus        76 DvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv  121 (316)
T 1ldn_A           76 DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (316)
T ss_dssp             SEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE
Confidence            999999986321  23345567788888889988888765433333

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.39  E-value=0.00025  Score=61.24  Aligned_cols=93  Identities=16%  Similarity=0.144  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeec--CCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||+|.||+|++|+.+++.|.++++++..+..  +.......+...+  ..+.+...|   ++.    + ++|+||.|.|
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g--~~i~v~~~~---~~~----~-~~DvV~~a~g   70 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRG--EEIPVEPLP---EGP----L-PVDLVLASAG   70 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETT--EEEEEEECC---SSC----C-CCSEEEECSH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcC--ceEEEEeCC---hhh----c-CCCEEEECCC
Confidence            58999999999999999999977765433221  1111111111111  123333333   221    3 8999999987


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ...              ++..+....+.|+ ++|-.|+..
T Consensus        71 ~~~--------------s~~~a~~~~~~G~-~vId~s~~~   95 (331)
T 2yv3_A           71 GGI--------------SRAKALVWAEGGA-LVVDNSSAW   95 (331)
T ss_dssp             HHH--------------HHHHHHHHHHTTC-EEEECSSSS
T ss_pred             ccc--------------hHHHHHHHHHCCC-EEEECCCcc
Confidence            531              2234555566677 677777764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.39  E-value=0.00026  Score=61.77  Aligned_cols=74  Identities=20%  Similarity=0.251  Sum_probs=51.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH---HHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD---EIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~--~~D~vi   92 (303)
                      +.+|+|+||+|.+|..+++.+...|.+|++++|++.. .+..+..+   ....  .|..+.+   .+.+...  ++|+||
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~g---a~~~--~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVLQNG---AHEV--FNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTT---CSEE--EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHcC---CCEE--EeCCCchHHHHHHHHcCCCCcEEEE
Confidence            6799999999999999999999999999999987432 22222221   1122  3444433   3333433  589999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      +++|.
T Consensus       245 ~~~G~  249 (351)
T 1yb5_A          245 EMLAN  249 (351)
T ss_dssp             ESCHH
T ss_pred             ECCCh
Confidence            99984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.39  E-value=8.3e-05  Score=62.87  Aligned_cols=37  Identities=19%  Similarity=0.131  Sum_probs=32.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |++++|.|+|+ |.+|..++..|.+.|++|++.+|++.
T Consensus         2 m~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            2 TGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            34679999986 99999999999999999999998754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.38  E-value=9e-05  Score=64.00  Aligned_cols=107  Identities=20%  Similarity=0.177  Sum_probs=68.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chh------cCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRL------CGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      ++||.|+|| |.+|..++..|...|+ +|++.+++....... ...      .....++... .   |   + +.++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N---N---Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C---C---H-HHHCCCC
Confidence            469999998 9999999999999998 999999875422210 000      0001112211 2   2   2 4578999


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +||-+++...  .....+....|....+.+++.+.+.... .++..|
T Consensus        85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999997532  1222345566777788888888776544 334343

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=8.7e-05  Score=64.06  Aligned_cols=96  Identities=16%  Similarity=0.159  Sum_probs=61.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH---HHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD---EIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~--~~D~vi   92 (303)
                      +++|+|+||+|.+|..+++.+...|.+|++++|+... .+..+..+   ....  .|..+.+   .+.+...  ++|++|
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~-~~~~~~~g---~~~~--~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-AQSALKAG---AWQV--INYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHT---CSEE--EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcC---CCEE--EECCCccHHHHHHHHhCCCCceEEE
Confidence            6799999999999999999999999999999986432 22222221   1122  3444433   3333332  489999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +++|...              ....++.++..|  +++.+++.
T Consensus       215 ~~~g~~~--------------~~~~~~~l~~~G--~iv~~g~~  241 (327)
T 1qor_A          215 DSVGRDT--------------WERSLDCLQRRG--LMVSFGNS  241 (327)
T ss_dssp             ECSCGGG--------------HHHHHHTEEEEE--EEEECCCT
T ss_pred             ECCchHH--------------HHHHHHHhcCCC--EEEEEecC
Confidence            9998210              123444444433  78887764

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.38  E-value=0.0003  Score=61.29  Aligned_cols=98  Identities=10%  Similarity=0.097  Sum_probs=57.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-----CCC----ceEEEecCCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-----DLG----QVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-----~~~----~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      ++||.|+||||++|+.+++.|.++. .++..+..+............     ..+    +..+...   +.+    .+.+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~   79 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD   79 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence            5699999999999999999887765 567666443221111100000     001    1111111   222    2468


Q ss_pred             cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          88 SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        88 ~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      +|+||.|.+...              ++.++..+.+.|+ ++|=.|+..-
T Consensus        80 vDvvf~a~p~~~--------------s~~~a~~~~~~G~-~vIDlSa~~R  114 (359)
T 4dpk_A           80 VDIIFSPLPQGA--------------AGPVEEQFAKEGF-PVISNSPDHR  114 (359)
T ss_dssp             CCEEEECCCTTT--------------HHHHHHHHHHTTC-EEEECSSTTT
T ss_pred             CCEEEECCChHH--------------HHHHHHHHHHCCC-EEEEcCCCcc
Confidence            999999987531              2245666667787 7777777653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.38  E-value=0.0003  Score=61.29  Aligned_cols=98  Identities=10%  Similarity=0.097  Sum_probs=57.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-----CCC----ceEEEecCCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-----DLG----QVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-----~~~----~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      ++||.|+||||++|+.+++.|.++. .++..+..+............     ..+    +..+...   +.+    .+.+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~   79 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD   79 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence            5699999999999999999887765 567666443221111100000     001    1111111   222    2468


Q ss_pred             cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          88 SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        88 ~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      +|+||.|.+...              ++.++..+.+.|+ ++|=.|+..-
T Consensus        80 vDvvf~a~p~~~--------------s~~~a~~~~~~G~-~vIDlSa~~R  114 (359)
T 4dpl_A           80 VDIIFSPLPQGA--------------AGPVEEQFAKEGF-PVISNSPDHR  114 (359)
T ss_dssp             CCEEEECCCTTT--------------HHHHHHHHHHTTC-EEEECSSTTT
T ss_pred             CCEEEECCChHH--------------HHHHHHHHHHCCC-EEEEcCCCcc
Confidence            999999987531              2245666667787 7777777653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.38  E-value=0.00018  Score=62.17  Aligned_cols=74  Identities=19%  Similarity=0.195  Sum_probs=50.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~vi   92 (303)
                      +.+|+|+||+|.+|..+++.+...|.+|++++|+.. ..+..+..+   .-..  .|..+.   +.+.+...  ++|+||
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~~g---~~~~--~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE-KAETARKLG---CHHT--INYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHHT---CSEE--EETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcC---CCEE--EECCCHHHHHHHHHHhCCCCCeEEE
Confidence            579999999999999999999999999999998743 222222221   1122  244443   33334332  489999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      +++|.
T Consensus       220 ~~~g~  224 (333)
T 1wly_A          220 DSIGK  224 (333)
T ss_dssp             ECSCT
T ss_pred             ECCcH
Confidence            99985

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.38  E-value=0.00012  Score=62.04  Aligned_cols=68  Identities=15%  Similarity=0.110  Sum_probs=48.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +||+|.|+|+||.+|+.+++.|.+.|++|++.+|++.. .+.+...    ++     +..+   ..+.++++|+||.+..
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~----g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEG-RDRLQGM----GI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHH-HHHHHHT----TC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHhc----CC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            35799999999999999999999999999999886432 2222211    11     1112   2345678999998875


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus        77 ~   77 (286)
T 3c24_A           77 D   77 (286)
T ss_dssp             H
T ss_pred             c
Confidence            4

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.37  E-value=0.0005  Score=61.45  Aligned_cols=70  Identities=10%  Similarity=0.130  Sum_probs=55.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.+++|+|+|+ |.+|+.+++++.+.|++|++++..+.......       --+.+..|..|.+.+.++.+++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~-------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV-------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH-------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhh-------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            34679999996 99999999999999999999976543322211       134567899999999999988999984

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.35  E-value=6.8e-05  Score=67.64  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=49.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----CceE-EE-----ecCCCCHHHHHHHhccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQVL-FQ-----PYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~~-~~-----~~Dl~d~~~~~~~~~~~   88 (303)
                      |||.|+|+ |++|..++..|.+.|++|++++|++.. .+.+.. +..    ++.+ .+     .+.+.-..++.++++++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~-v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNK-IEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHH-HHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            79999995 999999999999999999999997432 222211 000    0000 00     01111122345567889


Q ss_pred             CEEEEccccC
Q psy4233          89 NVVINLIGRE   98 (303)
Q Consensus        89 D~vi~~a~~~   98 (303)
                      |+||-+.+..
T Consensus        80 DvViiaVptp   89 (450)
T 3gg2_A           80 DIIFIAVGTP   89 (450)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEEcCCC
Confidence            9999998754

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.33  E-value=0.0018  Score=56.54  Aligned_cols=93  Identities=13%  Similarity=0.174  Sum_probs=53.4

Q ss_pred             cEEEEEcCCChhHHHHHH-HHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCN-KLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~-~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |+|.|+||||++|+.+++ .|.++.   .++..++.+.. . .....+.. ....+  .++.+++.    ++++|+||.|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a-G-~~~~~~~~-~~~~~--~~~~~~~~----~~~~Dvvf~a   71 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI-G-VPAPNFGK-DAGML--HDAFDIES----LKQLDAVITC   71 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSST-T-SBCCCSSS-CCCBC--EETTCHHH----HTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecccc-C-cCHHHhCC-CceEE--EecCChhH----hccCCEEEEC
Confidence            589999999999999999 666666   36666543321 1 11111111 01111  13334433    4789999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      ++..              .++.++..+.+.|++ ++|=.|+
T Consensus        72 ~~~~--------------~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           72 QGGS--------------YTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             SCHH--------------HHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CChH--------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence            8742              122455666667764 4554443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.31  E-value=0.00012  Score=62.83  Aligned_cols=107  Identities=15%  Similarity=0.102  Sum_probs=68.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccch--hcCC----CCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLR--LCGD----LGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~--~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      |||.|+|| |.+|..++..|...  |++|+++++++... +...  ....    .....+...  .|.+   + ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~-~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP-QGKALDMYESGPVGLFDTKVTGS--NDYA---D-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH-HHHHHHHHTTHHHHTCCCEEEEE--SCGG---G-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHhHHhhhhcccCCcEEEEC--CCHH---H-HCCCCE
Confidence            58999998 99999999999985  79999999975422 2111  0000    011111111  2322   3 688999


Q ss_pred             EEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          91 VINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        91 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      ||-+++....  ....+....|....+.+++.+.+.... .++.+|
T Consensus        73 Viiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           73 VIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            9999986422  224456667888888888888877543 445443

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.31  E-value=0.0022  Score=56.15  Aligned_cols=94  Identities=13%  Similarity=0.135  Sum_probs=54.6

Q ss_pred             CcEEEEEcCCChhHHHHHH-HHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCN-KLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~-~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .++|.|+||||++|+.+++ .|.++.   .++..++.+ ... .....+... ...+  .++.+.+.    ++++|+||.
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG-~~~~~~~~~-~~~v--~~~~~~~~----~~~vDvvf~   74 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAG-GKAPSFAKN-ETTL--KDATSIDD----LKKCDVIIT   74 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTT-SBCCTTCCS-CCBC--EETTCHHH----HHTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcC-CCHHHcCCC-ceEE--EeCCChhH----hcCCCEEEE
Confidence            4799999999999999999 666666   366665443 211 111101110 1111  23334443    468999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      |++..              .++.++..+.++|++ ++|=.|+
T Consensus        75 a~~~~--------------~s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           75 CQGGD--------------YTNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CCChH--------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence            98742              123456666677874 5554443

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.28  E-value=0.0015  Score=57.66  Aligned_cols=70  Identities=14%  Similarity=0.137  Sum_probs=54.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.+++|+|+|+ |.+|..+++++.+.|++|++++..+.......       --+.+..|..|.+.+.++.+.+|+|..
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------ADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------CCceEecCcCCHHHHHHHHHhCCEeee
Confidence            45779999996 89999999999999999999987643322111       123556889999999999999999853

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.28  E-value=0.00026  Score=61.80  Aligned_cols=97  Identities=16%  Similarity=0.133  Sum_probs=61.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchh-cCCCCceEEEecCCCCHH---HHHHHhc-ccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDD---EIRKAIK-YSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~---~~~~~~~-~~D~vi   92 (303)
                      .+|+|+||+|.||..+++.+...|. +|++++++... .+.... .+    .. ...|..+.+   .+.+... ++|++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~-~~~~~~~~g----~~-~~~d~~~~~~~~~~~~~~~~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK-CILLTSELG----FD-AAINYKKDNVAEQLRESCPAGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHH-HHHHHHTSC----CS-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHH-HHHHHHHcC----Cc-eEEecCchHHHHHHHHhcCCCCCEEE
Confidence            7999999999999999999999998 99999886432 222221 21    11 123444432   2333333 489999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      +++|..              .....++.++..|  ++|.++....
T Consensus       236 ~~~G~~--------------~~~~~~~~l~~~G--~iv~~G~~~~  264 (357)
T 2zb4_A          236 DNVGGN--------------ISDTVISQMNENS--HIILCGQISQ  264 (357)
T ss_dssp             ESCCHH--------------HHHHHHHTEEEEE--EEEECCCGGG
T ss_pred             ECCCHH--------------HHHHHHHHhccCc--EEEEECCccc
Confidence            999831              1113344444333  7888776544

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.27  E-value=0.00019  Score=62.66  Aligned_cols=114  Identities=15%  Similarity=0.091  Sum_probs=71.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--e---EEEeecCCCcc---ccc--chhc-CCCCceEEEecCCCCHHHHHHHh
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--Q---IIIPYRGNFYD---VRD--LRLC-GDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~---V~~~~R~~~~~---~~~--~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      +++||.|+||+|.||++++-.|+..+.  +   +.+..-..+..   .+.  ..+. ...+-...+..  .+  ...+.+
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~--~~y~~~  106 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYEVF  106 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--ec--CCHHHh
Confidence            467999999999999999999998762  2   55533322211   111  0111 00011111111  11  124578


Q ss_pred             cccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhc-CCc-eEEEEec
Q psy4233          86 KYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEM-GVE-KFIHISA  134 (303)
Q Consensus        86 ~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~-~~v~~Ss  134 (303)
                      +++|+||-+||..  ....+.+..+.|....+.+.+++.+. +.. .++.+|.
T Consensus       107 ~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          107 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            8999999999863  23456688999999999999999875 433 5665554

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.27  E-value=0.0047  Score=52.11  Aligned_cols=89  Identities=16%  Similarity=0.177  Sum_probs=56.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      .++|+|.|+||..|+.+++.+++.|++++..+...... +..      .++..       ..++.++.+  ++|++|.+.
T Consensus         7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g-~~i------~G~~v-------y~sl~el~~~~~~Dv~Ii~v   72 (288)
T 1oi7_A            7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGG-MEV------LGVPV-------YDTVKEAVAHHEVDASIIFV   72 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT-CEE------TTEEE-------ESSHHHHHHHSCCSEEEECC
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCC-ceE------CCEEe-------eCCHHHHhhcCCCCEEEEec
Confidence            56899999999999999999999999865433322110 110      11111       122334444  799999776


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ...              .+..+++.|.+.|++.+|.+++
T Consensus        73 p~~--------------~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           73 PAP--------------AAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             CHH--------------HHHHHHHHHHHTTCSEEEECCS
T ss_pred             CHH--------------HHHHHHHHHHHCCCCEEEEECC
Confidence            432              2335777788889866776553

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.26  E-value=0.00016  Score=62.88  Aligned_cols=75  Identities=15%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCH----HHHHHHh-cccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRND----DEIRKAI-KYSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~----~~~~~~~-~~~D~   90 (303)
                      .+++|||+||+|.+|..+++.+...|.+|++++|+... .+..+ ..+   -...+  |..+.    +.+.+.. .++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~-~~~~~~~~g---~~~~~--d~~~~~~~~~~~~~~~~~~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEK-VDLLKTKFG---FDDAF--NYKEESDLTAALKRCFPNGIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTSC---CSEEE--ETTSCSCSHHHHHHHCTTCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHcC---CceEE--ecCCHHHHHHHHHHHhCCCCcE
Confidence            36799999999999999999999999999999986432 22222 121   11222  44332    2333332 25899


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      ||+++|.
T Consensus       229 vi~~~g~  235 (345)
T 2j3h_A          229 YFENVGG  235 (345)
T ss_dssp             EEESSCH
T ss_pred             EEECCCH
Confidence            9999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.26  E-value=0.00054  Score=60.06  Aligned_cols=98  Identities=19%  Similarity=0.215  Sum_probs=64.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .+.+|||+|+ |-||..+++.+...|.+|+++++++.......+..+   -.++  .|..+.+.+.++..++|+||+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG---a~~v--~~~~~~~~~~~~~~~~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG---ADSF--LVSRDQEQMQAAAGTLDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC---CSEE--EETTCHHHHHHTTTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---CceE--EeccCHHHHHHhhCCCCEEEECCC
Confidence            4679999996 999999999999999999999887543221111221   1122  355566677776677999999998


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      ....             ....++.++..|  ++|.+++.
T Consensus       261 ~~~~-------------~~~~~~~l~~~G--~iv~~g~~  284 (366)
T 1yqd_A          261 AVHP-------------LLPLFGLLKSHG--KLILVGAP  284 (366)
T ss_dssp             SCCC-------------SHHHHHHEEEEE--EEEECCCC
T ss_pred             cHHH-------------HHHHHHHHhcCC--EEEEEccC
Confidence            5311             113455555443  78877754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.25  E-value=0.00019  Score=64.56  Aligned_cols=78  Identities=17%  Similarity=0.214  Sum_probs=48.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC---CCceE-EE-----ecCCCCHHHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD---LGQVL-FQ-----PYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~---~~~~~-~~-----~~Dl~d~~~~~~~~~~~D   89 (303)
                      |+|.|+| +|++|..++..|.+.|++|++++|++.. .+.+.....   .++.+ .+     .+.+....++.+.++++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~-~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTK-IDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            5899999 6999999999999999999999986432 222111000   00000 00     011111223445667899


Q ss_pred             EEEEccccC
Q psy4233          90 VVINLIGRE   98 (303)
Q Consensus        90 ~vi~~a~~~   98 (303)
                      +||.+.+..
T Consensus        79 vviiaVptp   87 (436)
T 1mv8_A           79 VSFICVGTP   87 (436)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999998754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.24  E-value=0.00072  Score=57.50  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=32.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ++++|.|+||.|.+|..+++.|.+.|++|++.+|+.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            356899999899999999999999999999998864

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.24  E-value=0.0021  Score=55.61  Aligned_cols=94  Identities=15%  Similarity=0.144  Sum_probs=56.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++||.|.||||++|+.+++.|.++.+   ++..++.+.. .-..+.. .. ....+...|  + +    .++++|+||.|
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~-aG~~~~~-~~-~~~~~~~~~--~-~----~~~~~Dvvf~a   70 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS-QGRKLAF-RG-QEIEVEDAE--T-A----DPSGLDIALFS   70 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-SSCEEEE-TT-EEEEEEETT--T-S----CCTTCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc-CCCceee-cC-CceEEEeCC--H-H----HhccCCEEEEC
Confidence            36899999999999999999888743   4555543222 1111111 11 112222222  1 1    24689999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      ++..              .++..+..+.+.|+ ++|=.|+..
T Consensus        71 ~~~~--------------~s~~~a~~~~~~G~-~vID~Sa~~   97 (344)
T 3tz6_A           71 AGSA--------------MSKVQAPRFAAAGV-TVIDNSSAW   97 (344)
T ss_dssp             SCHH--------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CChH--------------HHHHHHHHHHhCCC-EEEECCCcc
Confidence            8742              12345666667787 677777654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.22  E-value=0.00052  Score=59.86  Aligned_cols=96  Identities=10%  Similarity=0.129  Sum_probs=61.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~vi   92 (303)
                      +.+|+|+||+|.+|..+++.+...|.+|++++|+... .+..+..+    .. ...|..+.   +.+.+...  ++|++|
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK-LQMAEKLG----AA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHT----CS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcC----Cc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            6799999999999999999999999999999986432 22222222    11 12344443   33334333  489999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +++|...              ....++.++..|  +++.++..
T Consensus       237 ~~~G~~~--------------~~~~~~~l~~~G--~iv~~G~~  263 (354)
T 2j8z_A          237 DCIGGSY--------------WEKNVNCLALDG--RWVLYGLM  263 (354)
T ss_dssp             ESSCGGG--------------HHHHHHHEEEEE--EEEECCCT
T ss_pred             ECCCchH--------------HHHHHHhccCCC--EEEEEecc
Confidence            9998521              123444444433  78877654

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.00013  Score=59.33  Aligned_cols=69  Identities=19%  Similarity=0.148  Sum_probs=46.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEE-eecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIII-PYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~-~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |+||+|.|+| +|.+|..+++.|.+.|++|++ .+|++.. .+.+....   ++....   .+.    +.++++|+||-+
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~-~~~l~~~~---g~~~~~---~~~----~~~~~aDvVila   88 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPAS-LSSVTDRF---GASVKA---VEL----KDALQADVVILA   88 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGG-GHHHHHHH---TTTEEE---CCH----HHHTTSSEEEEE
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHH-HHHHHHHh---CCCccc---ChH----HHHhcCCEEEEe
Confidence            4578999999 699999999999999999999 7776433 22221110   111111   122    235789999988


Q ss_pred             cc
Q psy4233          95 IG   96 (303)
Q Consensus        95 a~   96 (303)
                      ..
T Consensus        89 vp   90 (220)
T 4huj_A           89 VP   90 (220)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.21  E-value=0.00017  Score=62.05  Aligned_cols=108  Identities=19%  Similarity=0.142  Sum_probs=66.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chh------cCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRL------CGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      +|||.|+|| |.+|+.++..|+..|+ +|++++++....... ...      .....++... .   |   + +.++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HHhCCCC
Confidence            579999998 9999999999999998 999999875322211 000      0001112111 1   2   2 3568899


Q ss_pred             EEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          90 VVINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        90 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      +||-+++....  ....+....|....+.+++.+.+.... .++.+|.
T Consensus        75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999975321  222334455666677788877766433 3444443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.19  E-value=0.0011  Score=56.59  Aligned_cols=107  Identities=13%  Similarity=0.122  Sum_probs=71.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchhcC---CCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRLCG---DLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |||.|+|| |.+|+.++..|+..+  .++.+++++...... ...+..   ....+.+.. +  +    .+.++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 999999999999887  689999886422111 001100   012233332 2  2    23588999999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      .+++...  .....+....|....+.+++.+++.+.. .++.+|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9998642  2234466778888899999999887654 455443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.19  E-value=0.00051  Score=59.41  Aligned_cols=100  Identities=20%  Similarity=0.190  Sum_probs=62.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhcCCCCceEEEecCCCCHH---HHHHHh-cccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCGDLGQVLFQPYHPRNDD---EIRKAI-KYSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~---~~~~~~-~~~D~v   91 (303)
                      .+.+|||+||+|.||..+++.+...|.+|++++|++.. .+.. +..+   -...  .|..+.+   .+.+.. .++|+|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~~g---~~~~--~~~~~~~~~~~~~~~~~~~~d~v  222 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEK-CRFLVEELG---FDGA--IDYKNEDLAAGLKRECPKGIDVF  222 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTC---CSEE--EETTTSCHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHcC---CCEE--EECCCHHHHHHHHHhcCCCceEE
Confidence            36799999999999999999999999999999987432 2222 2221   1122  2333332   233332 249999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      |+++|..              .....++.++..|  +++.++....+
T Consensus       223 i~~~g~~--------------~~~~~~~~l~~~G--~iv~~G~~~~~  253 (336)
T 4b7c_A          223 FDNVGGE--------------ILDTVLTRIAFKA--RIVLCGAISQY  253 (336)
T ss_dssp             EESSCHH--------------HHHHHHTTEEEEE--EEEECCCGGGG
T ss_pred             EECCCcc--------------hHHHHHHHHhhCC--EEEEEeecccc
Confidence            9999841              1112333344333  78888766543

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.18  E-value=0.0012  Score=56.53  Aligned_cols=105  Identities=14%  Similarity=0.095  Sum_probs=66.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhc-C-----CCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLC-G-----DLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~-~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      ||||.|+| +|.+|+.++..|++.|  ++|++++|+.... +..... .     ....+.....   |.    +.++++|
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~~aD   71 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKV-KADQIDFQDAMANLEAHGNIVIN---DW----AALADAD   71 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHH-HHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTCS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHH-HHHHHHHHhhhhhcCCCeEEEeC---CH----HHhCCCC
Confidence            47999999 6999999999999999  8999999974322 111100 0     0012333222   22    3567899


Q ss_pred             EEEEccccCc-----c-ccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          90 VVINLIGREF-----A-TKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        90 ~vi~~a~~~~-----~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      +||-+++...     + ....+....|....+.+++.+.+...+.++.
T Consensus        72 vViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii  119 (309)
T 1hyh_A           72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV  119 (309)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence            9999988633     1 2233456667777788888887765443433

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.18  E-value=0.00041  Score=60.20  Aligned_cols=98  Identities=13%  Similarity=0.076  Sum_probs=63.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNVV   91 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~v   91 (303)
                      .+++|||+||+|.+|..+++.+...|.+|++++|++.. .+..+..+   -...  .|..+.   +.+.+...  ++|+|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~~g---a~~~--~d~~~~~~~~~~~~~~~~~~~d~v  239 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK-LRRAKALG---ADET--VNYTHPDWPKEVRRLTGGKGADKV  239 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHT---CSEE--EETTSTTHHHHHHHHTTTTCEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcC---CCEE--EcCCcccHHHHHHHHhCCCCceEE
Confidence            36799999999999999999999999999999986432 22222222   1122  344443   23444433  58999


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      |+++|..              .....++.++..|  +++.+++..
T Consensus       240 i~~~g~~--------------~~~~~~~~l~~~G--~~v~~g~~~  268 (343)
T 2eih_A          240 VDHTGAL--------------YFEGVIKATANGG--RIAIAGASS  268 (343)
T ss_dssp             EESSCSS--------------SHHHHHHHEEEEE--EEEESSCCC
T ss_pred             EECCCHH--------------HHHHHHHhhccCC--EEEEEecCC
Confidence            9999821              1224555555544  788777653

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.18  E-value=0.00058  Score=51.00  Aligned_cols=87  Identities=15%  Similarity=0.152  Sum_probs=55.1

Q ss_pred             CCCcEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .++++|.|+|+|   |.+|..+++.|++.|++|+.+.++..+ ..         ++.       -..++.++...+|+++
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~-i~---------G~~-------~~~s~~el~~~vDlvi   74 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-IE---------GLK-------CYRSVRELPKDVDVIV   74 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-ET---------TEE-------CBSSGGGSCTTCCEEE
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe-EC---------Cee-------ecCCHHHhCCCCCEEE
Confidence            467899999997   899999999999999998877665311 11         111       1111222334689988


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      -+....              ....+++.+.+.|++.++..+
T Consensus        75 i~vp~~--------------~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           75 FVVPPK--------------VGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             ECSCHH--------------HHHHHHHHHHHTTCCEEEECT
T ss_pred             EEeCHH--------------HHHHHHHHHHHcCCCEEEEcC
Confidence            876521              122456666667887766554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.17  E-value=0.00027  Score=61.88  Aligned_cols=77  Identities=17%  Similarity=0.087  Sum_probs=54.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +.+++|+|+|+ |-+|..+++.|...|.+|++++|++... +....... ..+..+   ..+.+++.+.+.++|+||+++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~-~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~DvVI~~~  238 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFG-SRVELL---YSNSAEIETAVAEADLLIGAV  238 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHG-GGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhhC-ceeEee---eCCHHHHHHHHcCCCEEEECC
Confidence            45689999998 9999999999999999999999975332 22211110 112122   234567777888999999999


Q ss_pred             ccC
Q psy4233          96 GRE   98 (303)
Q Consensus        96 ~~~   98 (303)
                      +..
T Consensus       239 ~~~  241 (361)
T 1pjc_A          239 LVP  241 (361)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            864

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.16  E-value=0.0014  Score=58.27  Aligned_cols=71  Identities=15%  Similarity=0.215  Sum_probs=55.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++++|+|+|+ |.+|..+++++.+.|++|++++ .+........     .....+.+|..|.+.+.++.+.+|+|+.
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----d~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----AHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----CSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----cccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            44679999996 8999999999999999999998 5433222211     1124577899999999999999999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.16  E-value=0.0023  Score=57.87  Aligned_cols=100  Identities=20%  Similarity=0.268  Sum_probs=72.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a   95 (303)
                      ..++|+|.|| |.+|..+++.|- ++++|.++.++.... ..+..  .+++..++.||-+|.+.+.+. +.++|+++-+.
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~-~~la~--~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T  308 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRA-EKLSE--ELENTIVFCGDAADQELLTEENIDQVDVFIALT  308 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHH-HHHHH--HCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred             cccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHH-HHHHH--HCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence            3568999997 999999999974 568999987764332 22221  236789999999999998874 67799998886


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      +-.         +.|+    -..-.|++.|++|.|-.-.
T Consensus       309 ~~D---------e~Ni----~~~llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          309 NED---------ETNI----MSAMLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             SCH---------HHHH----HHHHHHHHTTCSEEEEECS
T ss_pred             cCc---------HHHH----HHHHHHHHcCCcccccccc
Confidence            542         2233    3555678899988885443

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.13  E-value=0.0013  Score=58.99  Aligned_cols=96  Identities=19%  Similarity=0.131  Sum_probs=63.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-C---eEEEeecCCCcccccchhcCCCCceEEEecCC--CCHHH-HHHHhcccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-S---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDE-IRKAIKYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~-~~~~~~~~D~   90 (303)
                      .+||+|+| .|.||+.+++.|.++. +   +|++.+..... .+.....    ++.+...++  .|.++ +.+++++.|+
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~~~~~----g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDVAQQY----GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCHHHHH----TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhHHhhc----CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            46899999 6999999999999875 4   68877665332 2211111    244444444  45544 5567777899


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN  136 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  136 (303)
                      |||++-..              ....++++|.++|+ .++  +++.
T Consensus        87 VIN~s~~~--------------~~l~Im~acleaGv-~Yl--DTa~  115 (480)
T 2ph5_A           87 LIDVSIGI--------------SSLALIILCNQKGA-LYI--NAAT  115 (480)
T ss_dssp             EEECCSSS--------------CHHHHHHHHHHHTC-EEE--ESSC
T ss_pred             EEECCccc--------------cCHHHHHHHHHcCC-CEE--ECCC
Confidence            99865322              12369999999997 555  5544

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.12  E-value=0.00037  Score=58.79  Aligned_cols=79  Identities=14%  Similarity=0.087  Sum_probs=52.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ...+++++|+|+ |.+|+.++.+|.+.|. +|+++.|+..+..+...... ..+.+.+...++   +++.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEE
Confidence            456889999998 8999999999999997 79999997543322111110 001122333333   33556677899999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      ++.+.
T Consensus       200 naTp~  204 (283)
T 3jyo_A          200 NATPM  204 (283)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            99865

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.12  E-value=0.0019  Score=55.28  Aligned_cols=111  Identities=15%  Similarity=0.152  Sum_probs=68.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCccc-ccchhc-C--CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDV-RDLRLC-G--DLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~-~~~~~~-~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ++|||.|+|| |.+|..++..|...|+  +|++++|+..... ...... +  ......+...  .+.    +.++++|+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~   78 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADM   78 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCE
Confidence            3579999998 9999999999999998  9999998742211 011100 0  0011222221  122    24678999


Q ss_pred             EEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          91 VINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        91 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ||-+++....  ....+....|....+.+++.+++.+...+|...+
T Consensus        79 Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           79 VVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            9999975321  2334566667777777888777655444444333

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.12  E-value=0.001  Score=55.86  Aligned_cols=70  Identities=14%  Similarity=0.078  Sum_probs=51.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++++|+|+ |.+|+.++..|.+.|. +|++..|+..+. +.+.     .++..     ...+++.+.+.++|+||++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a-~~la-----~~~~~-----~~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRF-NNWS-----LNINK-----INLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGG-TTCC-----SCCEE-----ECHHHHHHTGGGCSEEEEC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHH-----Hhccc-----ccHhhHHHHhcCCCEEEEC
Confidence            45789999997 8999999999999997 899999975432 2221     11221     1355677778889999999


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      .+.
T Consensus       183 Tp~  185 (277)
T 3don_A          183 TPA  185 (277)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            765

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.12  E-value=0.0022  Score=56.32  Aligned_cols=69  Identities=14%  Similarity=0.045  Sum_probs=53.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |++|+|+|+ |..|..++++|.+.|++|++++..+.......      . -..+..|..|.+.+.++..++|+|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~------~-~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV------A-DEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG------S-SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh------C-ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            479999997 89999999999999999999887543321111      1 235678899999999888889998854

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.12  E-value=0.001  Score=57.73  Aligned_cols=75  Identities=20%  Similarity=0.297  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~~   94 (303)
                      +.+|||+||+|.+|..++..+...|.+|++++++.... +..+..+   -..++..+ .+ .+.+.+...  ++|+||++
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~g---a~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSVG---ADIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHT---CSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcC---CcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            67999999999999999999999999999999865432 3222222   12334344 33 233444443  49999999


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            985

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.08  E-value=0.0023  Score=54.39  Aligned_cols=112  Identities=16%  Similarity=0.112  Sum_probs=69.1

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      +.+..++||.|+|| |.+|..++..|+..|.  +|.+++.+.........+. ...++++.. .   |   + +.++++|
T Consensus         9 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~---d---~-~~l~~aD   79 (303)
T 2i6t_A            9 HENKTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-K---D---L-SASAHSK   79 (303)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-S---C---G-GGGTTCS
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-C---C---H-HHHCCCC
Confidence            45556789999996 9999999999999997  9999998753111111110 111234331 2   2   2 3578999


Q ss_pred             EEEEccccCcc-ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          90 VVINLIGREFA-TKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        90 ~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      +||-++|...+ ....+....|....+.+++.+.+.... .++.+|
T Consensus        80 ~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           80 VVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             EEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            99999987321 233456677888888899988886644 444444

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=97.08  E-value=0.00079  Score=58.28  Aligned_cols=74  Identities=16%  Similarity=0.275  Sum_probs=44.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCC-CceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDL-GQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .|.||.|.||||++|+.+++.|.++. .++..+..+.. .-..+. ...+. ....+  -+ .|.+++   +.++|+||.
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~-aG~~~~~~~p~~~~~l~~--~~-~~~~~~---~~~~Dvvf~   84 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTY-AGKKLEEIFPSTLENSIL--SE-FDPEKV---SKNCDVLFT   84 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTT-TTSBHHHHCGGGCCCCBC--BC-CCHHHH---HHHCSEEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCccc-ccCChHHhChhhccCceE--Ee-CCHHHh---hcCCCEEEE
Confidence            36799999999999999999999986 56776654322 111111 10000 11111  11 133333   467999999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +++-
T Consensus        85 alp~   88 (351)
T 1vkn_A           85 ALPA   88 (351)
T ss_dssp             CCST
T ss_pred             CCCc
Confidence            8764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.07  E-value=0.00069  Score=57.94  Aligned_cols=68  Identities=18%  Similarity=0.149  Sum_probs=47.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      .+||+|.|+| .|.+|..+++.|.+.|++|++.+|++.. .+.+...    ++..       .++..++++++|+||-+.
T Consensus        19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~-~~~l~~~----g~~~-------~~~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSK-CDELVEH----GASV-------CESPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGG-GHHHHHT----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHC----CCeE-------cCCHHHHHHhCCEEEEEc
Confidence            4578999998 5999999999999999999999997543 2222211    1211       123344556678887776


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      .
T Consensus        86 p   86 (310)
T 3doj_A           86 S   86 (310)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.06  E-value=0.00077  Score=57.34  Aligned_cols=74  Identities=15%  Similarity=0.022  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++.. .+..+..+    ...+ .|..+.+++.+.+.++|+||+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~g----a~~~-~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK-LALPLALG----AEEA-ATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG-SHHHHHTT----CSEE-EEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcC----CCEE-EECCcchhHHHHhcCceEEEE-CC
Confidence            36799999999999999999999999999999986433 22222222    2111 244341344444578999999 87


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus       198 ~  198 (302)
T 1iz0_A          198 G  198 (302)
T ss_dssp             C
T ss_pred             H
Confidence            4

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.06  E-value=0.001  Score=57.42  Aligned_cols=99  Identities=15%  Similarity=0.166  Sum_probs=62.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~   93 (303)
                      .+.+|||+||+|.+|..++..+...|.+|++++++.. ..+..+..+   ....+..+-.+ .+.+.+...  ++|+||+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~~g---a~~~~~~~~~~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYG---AEYLINASKEDILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTT---CSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcC---CcEEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence            3679999999999999999999999999999998643 222222222   12233222122 233444433  4899999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      ++|..              .....++.++..|  ++|.++..
T Consensus       224 ~~g~~--------------~~~~~~~~l~~~G--~iv~~G~~  249 (334)
T 3qwb_A          224 SVGKD--------------TFEISLAALKRKG--VFVSFGNA  249 (334)
T ss_dssp             CCGGG--------------GHHHHHHHEEEEE--EEEECCCT
T ss_pred             CCChH--------------HHHHHHHHhccCC--EEEEEcCC
Confidence            99852              1123455555444  78877653

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.05  E-value=0.0023  Score=54.90  Aligned_cols=106  Identities=16%  Similarity=0.127  Sum_probs=68.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchh-----cCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRL-----CGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|+ |.+|+.++..|+..|+  +|+++++++... +....     ........+..   +|.    +.++++|+|
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvV   71 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA-EGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVV   71 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH-HHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHH-HHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEE
Confidence            58999998 9999999999999998  999999874321 11110     00001122222   232    246889999


Q ss_pred             EEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233          92 INLIGREFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHIS  133 (303)
Q Consensus        92 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  133 (303)
                      |.+++....  ....+....|....+.+++.+.+.... .+|.+|
T Consensus        72 iiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           72 IVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999986432  124456667777888888888776544 444443

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.05  E-value=0.00047  Score=62.37  Aligned_cols=36  Identities=17%  Similarity=0.108  Sum_probs=32.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CC-eEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GS-QIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~   53 (303)
                      .+|||.|+|+ |++|..++..|.+. |+ +|++++|++.
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            4679999995 99999999999999 99 9999999865

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.04  E-value=0.001  Score=58.06  Aligned_cols=78  Identities=14%  Similarity=0.055  Sum_probs=55.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC------------------CC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP------------------RN   77 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~d   77 (303)
                      ..+.+|+|+|+ |-+|...++.+...|.+|++++|++... +.....    +.+++..|.                  .+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l-~~~~~l----Ga~~~~l~~~~~~~~gya~~~~~~~~~~~  255 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVA-EQVRSV----GAQWLDLGIDAAGEGGYARELSEAERAQQ  255 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGH-HHHHHT----TCEECCCC-------------CHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCeEEeccccccccccchhhhhHHHHhhh
Confidence            45779999997 9999999999999999999999985432 222221    233333221                  12


Q ss_pred             HHHHHHHhcccCEEEEccccCc
Q psy4233          78 DDEIRKAIKYSNVVINLIGREF   99 (303)
Q Consensus        78 ~~~~~~~~~~~D~vi~~a~~~~   99 (303)
                      .+.+.+.++++|+||.++....
T Consensus       256 ~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          256 QQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHhcCCEEEECCCCCC
Confidence            4567788899999999875543

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.04  E-value=0.00041  Score=59.23  Aligned_cols=36  Identities=28%  Similarity=0.307  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +||+|+|+|+ |.+|+.++..|.+.|++|++++|++.
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            3579999996 99999999999999999999998743

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.02  E-value=0.0043  Score=52.72  Aligned_cols=35  Identities=20%  Similarity=0.109  Sum_probs=32.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |+||.++| .|.+|..+++.|++.||+|++.+|++.
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~   37 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQS   37 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence            67999999 699999999999999999999999754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.02  E-value=0.00095  Score=57.42  Aligned_cols=77  Identities=17%  Similarity=0.214  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~   93 (303)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++. ..+..+..+   -.+.+..+-.+ .+.+.+...  ++|+||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~~G---a~~~~~~~~~~~~~~~~~~~~~~g~Dvvid  215 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE-KAAHAKALG---AWETIDYSHEDVAKRVLELTDGKKCPVVYD  215 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH-HHHHHHHHT---CSEEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcC---CCEEEeCCCccHHHHHHHHhCCCCceEEEE
Confidence            3679999999999999999999999999999998643 223222222   12233222122 233444443  4999999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      ++|.
T Consensus       216 ~~g~  219 (325)
T 3jyn_A          216 GVGQ  219 (325)
T ss_dssp             SSCG
T ss_pred             CCCh
Confidence            9985

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.00  E-value=0.00044  Score=59.22  Aligned_cols=71  Identities=13%  Similarity=0.078  Sum_probs=46.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCC-CcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGN-FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .+.+|+|.|+|. |.+|..+++.|.+.|+ +|++.+|++ .+..+.+...    ++..       .++..++++++|+||
T Consensus        21 ~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~----g~~~-------~~~~~e~~~~aDvVi   88 (312)
T 3qsg_A           21 QSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL----GVSC-------KASVAEVAGECDVIF   88 (312)
T ss_dssp             ----CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT----TCEE-------CSCHHHHHHHCSEEE
T ss_pred             cCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC----CCEE-------eCCHHHHHhcCCEEE
Confidence            345789999995 9999999999999999 999999963 3332322221    1221       122345567789998


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      -+...
T Consensus        89 ~~vp~   93 (312)
T 3qsg_A           89 SLVTA   93 (312)
T ss_dssp             ECSCT
T ss_pred             EecCc
Confidence            88754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.97  E-value=0.0015  Score=56.49  Aligned_cols=74  Identities=15%  Similarity=0.138  Sum_probs=50.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~vi   92 (303)
                      +.+|+|+||+|.+|..++..+...|.+|++++++... .+..+..+   -...+  |..+.   +.+.+...  ++|+||
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lg---a~~~~--~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH-TEELLRLG---AAYVI--DTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTT-HHHHHHHT---CSEEE--ETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhCC---CcEEE--eCCcccHHHHHHHHhCCCCCcEEE
Confidence            6799999999999999999999999999999987543 23222222   12222  33332   33444433  589999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      +++|.
T Consensus       219 d~~g~  223 (340)
T 3gms_A          219 DSIGG  223 (340)
T ss_dssp             ESSCH
T ss_pred             ECCCC
Confidence            99985

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=96.97  E-value=0.0018  Score=58.30  Aligned_cols=75  Identities=12%  Similarity=0.019  Sum_probs=49.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEe-----cCCCCHHHHHHHhc--cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-----YHPRNDDEIRKAIK--YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~--~~   88 (303)
                      |+++||||+|+ |.+|..+++.+.+.|++++++..............   .....+.     .+..|.+.+.++.+  ++
T Consensus         4 m~~~kiLI~g~-g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~a---d~~~~i~~~~~~~~~~d~~~l~~~~~~~~~   79 (446)
T 3ouz_A            4 MEIKSILIANR-GEIALRALRTIKEMGKKAICVYSEADKDALYLKYA---DASICIGKARSSESYLNIPAIIAAAEIAEA   79 (446)
T ss_dssp             TCCCEEEECCC-HHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHS---SEEEEEECCTTTTGGGCHHHHHHHHHHHTC
T ss_pred             cccceEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhC---CEEEEcCCCCccccccCHHHHHHHHHHhCc
Confidence            55789999995 88999999999999999999865433222221111   1111121     15567777777765  48


Q ss_pred             CEEEEc
Q psy4233          89 NVVINL   94 (303)
Q Consensus        89 D~vi~~   94 (303)
                      |+|+-.
T Consensus        80 d~i~p~   85 (446)
T 3ouz_A           80 DAIFPG   85 (446)
T ss_dssp             SEEECC
T ss_pred             CEEEEC
Confidence            987744

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.96  E-value=0.0012  Score=58.86  Aligned_cols=115  Identities=14%  Similarity=0.088  Sum_probs=63.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEe-------------cCCCCHHHHHH
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-------------YHPRNDDEIRK   83 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-------------~Dl~d~~~~~~   83 (303)
                      .|.+|.|+| .|++|..++..|.+.|++|++++.++. ..+.+.. +   +..+.+             +.+.=..+..+
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~-kV~~ln~-G---~~pi~Epgl~ell~~~~~~g~l~~tt~~~~   93 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPS-IVERLRA-G---RPHIYEPGLEEALGRALSSGRLSFAESAEE   93 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH-HHHHHHT-T---CCSSCCTTHHHHHHHHHHTTCEEECSSHHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHH-HHHHHHC-C---CCCCCCCCHHHHHHHHHHcCCeeEEcCHHH
Confidence            467999998 699999999999999999999988643 2222210 0   000111             11111122345


Q ss_pred             HhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEecCcc
Q psy4233          84 AIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV-EKFIHISALNA  137 (303)
Q Consensus        84 ~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~  137 (303)
                      .++.+|++|-|.+.+...+...-...-....+.+.+.++..+. .-+|+-||+.+
T Consensus        94 ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVpp  148 (444)
T 3vtf_A           94 AVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPP  148 (444)
T ss_dssp             HHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCT
T ss_pred             HHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCC
Confidence            5677899999987643222111111112234455556654332 24555565543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.95  E-value=0.00095  Score=58.15  Aligned_cols=77  Identities=17%  Similarity=0.246  Sum_probs=48.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec------CCC-CHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY------HPR-NDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~------Dl~-d~~~~~~~~~~~   88 (303)
                      |++|+|+|+|+ |.+|..++..|.+.|++|++++|++... +.+....   ++.+...      .+. ..+++.++++++
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRI-KEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLAVKDA   76 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHT---SEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHhcC---CeEEeccccccccccceecCCHHHHHhcC
Confidence            44579999996 9999999999999999999998864322 2221110   1111100      010 112344556789


Q ss_pred             CEEEEcccc
Q psy4233          89 NVVINLIGR   97 (303)
Q Consensus        89 D~vi~~a~~   97 (303)
                      |+||.+...
T Consensus        77 D~vi~~v~~   85 (359)
T 1bg6_A           77 DVILIVVPA   85 (359)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEEeCCc
Confidence            999988764

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.93  E-value=0.00046  Score=60.21  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=49.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC----CCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |++++|+|.|+|+ |.+|..++..|.+.|++|++.+|++.. .+.+...+    ..+++.+ ...+.-..++.++++++|
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~-~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aD  101 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDH-VDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVT  101 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHH-HHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCC
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCC
Confidence            3345689999996 999999999999999999999997432 22222111    0122211 001111123455678899


Q ss_pred             EEEEccc
Q psy4233          90 VVINLIG   96 (303)
Q Consensus        90 ~vi~~a~   96 (303)
                      +||-+..
T Consensus       102 vVilaVp  108 (356)
T 3k96_A          102 DILIVVP  108 (356)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9998764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.93  E-value=0.001  Score=55.72  Aligned_cols=76  Identities=16%  Similarity=0.048  Sum_probs=48.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +..+++++|+|+ |.+|+.++..|++.|.+|++..|+..+..+.........++..  .|+   +++.+  .++|+||++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivIn~  187 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVINA  187 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEEEC
Confidence            356789999998 8899999999999999999999975432222111111112222  222   11110  379999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      ++..
T Consensus       188 t~~~  191 (272)
T 1p77_A          188 TSAG  191 (272)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9864

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.93  E-value=0.0007  Score=55.81  Aligned_cols=39  Identities=26%  Similarity=0.451  Sum_probs=32.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ++.+|+|.|+| +|.+|+.+++.|++.|++|++.+|++..
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            35678999998 6999999999999999999999997543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.93  E-value=0.0015  Score=56.77  Aligned_cols=75  Identities=21%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNV   90 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~   90 (303)
                      .+.+|+|+||+|-+|..+++.+... |.+|+++++++.. .+..+..+   ....+  |..+.   +.+.+...  ++|+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~-~~~~~~~g---~~~~~--~~~~~~~~~~~~~~~~~~~~d~  243 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-VEAAKRAG---ADYVI--NASMQDPLAEIRRITESKGVDA  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-HHHHHHHT---CSEEE--ETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhC---CCEEe--cCCCccHHHHHHHHhcCCCceE
Confidence            3579999999999999999999999 9999999886432 22222222   11222  33333   33455543  5999


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      ||+++|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.92  E-value=0.0015  Score=56.81  Aligned_cols=76  Identities=12%  Similarity=0.173  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHh-cccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAI-KYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~-~~~D~vi~~a   95 (303)
                      +.+|+|+||+|.+|..+++.+...|.+|++++|++.. .+..+..+   -...+..+-.+ .+.+.+.. .++|+||+++
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lG---a~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK-CEACERLG---AKRGINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHT---CSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhcC---CCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            5799999999999999999999999999999987533 22222222   12223222122 22333333 2499999999


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      |.
T Consensus       244 g~  245 (353)
T 4dup_A          244 GA  245 (353)
T ss_dssp             CG
T ss_pred             CH
Confidence            85

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.91  E-value=0.0071  Score=50.97  Aligned_cols=105  Identities=13%  Similarity=0.203  Sum_probs=66.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcc--cc-------------------cchhcCCCCceEEEec
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYD--VR-------------------DLRLCGDLGQVLFQPY   73 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~--~~-------------------~~~~~~~~~~~~~~~~   73 (303)
                      +...+|+|+|+ |-+|+.+++.|...| .+++++++..-+.  ..                   .+......-+++.+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            45679999996 999999999999999 5777776643111  00                   0100011123566777


Q ss_pred             CCCCHHHHHHHh-----------cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          74 HPRNDDEIRKAI-----------KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        74 Dl~d~~~~~~~~-----------~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      ++++.+.+...+           +++|+||.+...             +..-..+-++|.+.++ .+|+.+..
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-------------~~~R~~in~~c~~~~~-Pli~~gv~  171 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-------------FEARMTINTACNELGQ-TWMESGVS  171 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-------------HHHHHHHHHHHHHHTC-CEEEEEEC
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-------------hhhhhHHHHHHHHhCC-CEEEeeee
Confidence            777766666655           579999988632             2222246677888776 67765543

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.91  E-value=0.0021  Score=48.06  Aligned_cols=88  Identities=10%  Similarity=-0.054  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++++|+|+|+|   |.+|..+++.|++.|++|+.+...  ...+.+      .++.. .-++      .++-..+|.++-
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~--~~~~~i------~G~~~-~~sl------~el~~~vDlavi   76 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR--FQGEEL------FGEEA-VASL------LDLKEPVDILDV   76 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG--GTTSEE------TTEEC-BSSG------GGCCSCCSEEEE
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC--cccCcC------CCEEe-cCCH------HHCCCCCCEEEE
Confidence            36799999999   899999999999999986665433  101111      01111 1112      222236898887


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      +.....              ...+++.+.+.|++.+++.+
T Consensus        77 ~vp~~~--------------~~~v~~~~~~~gi~~i~~~~  102 (140)
T 1iuk_A           77 FRPPSA--------------LMDHLPEVLALRPGLVWLQS  102 (140)
T ss_dssp             CSCHHH--------------HTTTHHHHHHHCCSCEEECT
T ss_pred             EeCHHH--------------HHHHHHHHHHcCCCEEEEcC
Confidence            764321              11356667777887776543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.88  E-value=0.00095  Score=57.37  Aligned_cols=68  Identities=18%  Similarity=0.251  Sum_probs=47.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ..+|+|.|+|. |.+|..+++.|.+.|++|++.+|++.. .+.+...    +++.       .+++.++++++|+||-+.
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~-~~~l~~~----g~~~-------~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPAR-AASLAAL----GATI-------HEQARAAARDADIVVSML   95 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHTT----TCEE-------ESSHHHHHTTCSEEEECC
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHH-HHHHHHC----CCEe-------eCCHHHHHhcCCEEEEEC
Confidence            45789999985 999999999999999999999987543 2222211    2221       223445667788888776


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      .
T Consensus        96 p   96 (320)
T 4dll_A           96 E   96 (320)
T ss_dssp             S
T ss_pred             C
Confidence            4

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.88  E-value=0.0011  Score=56.42  Aligned_cols=36  Identities=17%  Similarity=0.245  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      .+||.++| .|.+|..+++.|++.||+|++.+|++..
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~   40 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASK   40 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC------
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            35899999 6999999999999999999999997644

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.88  E-value=0.0052  Score=53.60  Aligned_cols=71  Identities=11%  Similarity=0.115  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC-CCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP-RNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |+||+|+|| |..|..++.++.+.|++|++++.++......+      . -+++..|. .|.+.+....+++|+|+-..+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~------a-D~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRNY------A-DEFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTTT------S-SEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHhh------C-CEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            689999995 89999999999999999999987654332221      1 23455554 467777777788999875543

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.88  E-value=0.0058  Score=53.80  Aligned_cols=71  Identities=13%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      ++|+|+|+|+ |.+|..+++++.+.|++|++++..+......  .     --+.+..|..|.+.+.++.+  ++|+|+..
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~--~-----~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~   81 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH--V-----AHRSHVINMLDGDALRRVVELEKPHYIVPE   81 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--G-----SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhh--h-----ccceEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence            4679999987 7999999999999999999988764432111  1     12456678889888888775  59999864


Q ss_pred             c
Q psy4233          95 I   95 (303)
Q Consensus        95 a   95 (303)
                      .
T Consensus        82 ~   82 (391)
T 1kjq_A           82 I   82 (391)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.87  E-value=0.0019  Score=56.49  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHh-cccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAI-KYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~-~~~D~vi~~a   95 (303)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.. ..+..+..+   -...+..+-.+. +.+.+.. .++|+||+++
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~G---a~~~~~~~~~~~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE-KSAFLKSLG---CDRPINYKTEPVGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTT---CSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH-HHHHHHHcC---CcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence            679999999999999999999999999999998643 222222222   122232222222 2233322 2489999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      |..              .....+++++..|  ++|.+++...+
T Consensus       240 g~~--------------~~~~~~~~l~~~G--~iv~~g~~~~~  266 (362)
T 2c0c_A          240 GGA--------------MFDLAVDALATKG--RLIVIGFISGY  266 (362)
T ss_dssp             CTH--------------HHHHHHHHEEEEE--EEEECCCGGGT
T ss_pred             CHH--------------HHHHHHHHHhcCC--EEEEEeCCCCc
Confidence            841              1224555555544  78888876543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.85  E-value=0.00096  Score=56.64  Aligned_cols=65  Identities=9%  Similarity=0.060  Sum_probs=45.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +|+|.|+| .|.+|..+++.|.+.|++|++.+|++... +.+...    +++.       .+++.++.+ +|+||.+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~-~~~~~~----g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAM-TPLAEA----GATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTS-HHHHHT----TCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHC----CCEE-------cCCHHHHHh-CCEEEEECC
Confidence            56899999 59999999999999999999999976532 222211    1211       123445556 888887764

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.84  E-value=0.00088  Score=55.62  Aligned_cols=67  Identities=16%  Similarity=0.159  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ||+|.|+| +|.+|+.+++.|.+.|++|.+.+|++... +.+....   ++..    ..+   +.++++++|+||.+..
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~-~~~~~~~---g~~~----~~~---~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERS-KEIAEQL---ALPY----AMS---HQDLIDQVDLVILGIK   69 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHH-HHHHHHH---TCCB----CSS---HHHHHHTCSEEEECSC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHH-HHHHHHc---CCEe----eCC---HHHHHhcCCEEEEEeC
Confidence            57999999 69999999999999999999998874332 2221110   1110    123   4455678999999875

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.82  E-value=0.0028  Score=51.23  Aligned_cols=72  Identities=11%  Similarity=0.154  Sum_probs=53.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++++|||+|| |-+|...++.|++.|.+|++++.........+..   ..+++++..++.+.     .+.++|.||-+.
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~---~~~i~~i~~~~~~~-----dL~~adLVIaAT   99 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA---KGQLRVKRKKVGEE-----DLLNVFFIVVAT   99 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH---TTSCEEECSCCCGG-----GSSSCSEEEECC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH---cCCcEEEECCCCHh-----HhCCCCEEEECC
Confidence            46889999997 9999999999999999999998764433322222   24588887776533     257899998654


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus       100 ~  100 (223)
T 3dfz_A          100 N  100 (223)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=96.81  E-value=0.0027  Score=54.73  Aligned_cols=32  Identities=9%  Similarity=0.167  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeec
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYR   50 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R   50 (303)
                      ++||.|.|+ |.||+.+++.|.++ +.+|.++.-
T Consensus         3 ~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d   35 (337)
T 3e5r_O            3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVND   35 (337)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             ceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEEC
Confidence            469999999 99999999999987 467777654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.81  E-value=0.0018  Score=54.53  Aligned_cols=75  Identities=20%  Similarity=0.210  Sum_probs=49.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++.+++++|+|+ |.+|+.++..|.+.|. +|++..|+..+..+..........++.+..  .+   +   ..++|+||+
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~--~~---l---~~~aDiIIn  193 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAF--EQ---L---KQSYDVIIN  193 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG--GG---C---CSCEEEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH--HH---h---cCCCCEEEE
Confidence            356789999997 8899999999999995 899999975432222111111112333322  11   1   157999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +.+..
T Consensus       194 aTp~g  198 (281)
T 3o8q_A          194 STSAS  198 (281)
T ss_dssp             CSCCC
T ss_pred             cCcCC
Confidence            98653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.80  E-value=0.0012  Score=57.88  Aligned_cols=73  Identities=15%  Similarity=0.238  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC--cccccchhcCCCCceEEEecCCCC--HHHHHHHhcccCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF--YDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIKYSNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi   92 (303)
                      .+.+|+|+|| |.+|..+++.+...|.+|++++++..  +..+..+..    ++..+  | .+  .+.+.+.-.++|+||
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga~~v--~-~~~~~~~~~~~~~~~d~vi  251 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KTNYY--N-SSNGYDKLKDSVGKFDVII  251 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence            3789999999 99999999999999999999998751  222222222    23333  4 33  223333114699999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      +++|.
T Consensus       252 d~~g~  256 (366)
T 2cdc_A          252 DATGA  256 (366)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.78  E-value=0.00086  Score=56.65  Aligned_cols=66  Identities=14%  Similarity=0.122  Sum_probs=45.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ||+|.|+| .|.+|..+++.|.+.|++|++.+|++... +.+...    ++..       .++..++++++|+||-+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~~----g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKC-APLVAL----GARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGG-HHHHHH----TCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHC----CCee-------cCCHHHHHHcCCEEEEEcC
Confidence            46899998 69999999999999999999999975432 222211    1211       1223445567888887765

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.77  E-value=0.0014  Score=55.38  Aligned_cols=65  Identities=18%  Similarity=0.198  Sum_probs=45.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |+|.|+|+ |.+|..+++.|.+.|++|++.+|++... +.+...    ++.       -.+++.++++++|+||-+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~~----g~~-------~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA-EELAAL----GAE-------RAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG-HHHHHT----TCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHC----CCe-------ecCCHHHHHhcCCEEEEEcC
Confidence            69999995 9999999999999999999999975432 222211    121       11234455667888887764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.77  E-value=0.001  Score=55.99  Aligned_cols=69  Identities=19%  Similarity=0.127  Sum_probs=48.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |++|+|.|+|+ |.+|+.+++.|++.|+   +|++.+|++... +.+...   -++..       ..+..+.++++|+||
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~-~~l~~~---~gi~~-------~~~~~~~~~~aDvVi   68 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKL-DFFKEK---CGVHT-------TQDNRQGALNADVVV   68 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHH-HHHHHT---TCCEE-------ESCHHHHHSSCSEEE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH-HHHHHH---cCCEE-------eCChHHHHhcCCeEE
Confidence            34689999997 9999999999999998   899999975432 222211   02322       122345678899999


Q ss_pred             Eccc
Q psy4233          93 NLIG   96 (303)
Q Consensus        93 ~~a~   96 (303)
                      -+..
T Consensus        69 lav~   72 (280)
T 3tri_A           69 LAVK   72 (280)
T ss_dssp             ECSC
T ss_pred             EEeC
Confidence            8873

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.76  E-value=0.0034  Score=52.40  Aligned_cols=36  Identities=17%  Similarity=0.176  Sum_probs=32.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++++|+|+|| |-+|...++.|++.|++|++++...
T Consensus        11 l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~   46 (274)
T 1kyq_A           11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL   46 (274)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCC
Confidence            46889999996 9999999999999999999987654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.74  E-value=0.0052  Score=51.27  Aligned_cols=58  Identities=17%  Similarity=0.247  Sum_probs=48.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++.+++++|+|+++.+|+.++..|++.|..|+++.|...                          ++.+.++.+|+||..
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~--------------------------~L~~~~~~ADIVI~A  210 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK--------------------------DLSLYTRQADLIIVA  210 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------CHHHHHTTCSEEEEC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch--------------------------hHHHHhhcCCEEEEC
Confidence            467899999999999999999999999999999876421                          255677889999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      +|..
T Consensus       211 vg~p  214 (285)
T 3p2o_A          211 AGCV  214 (285)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            8864

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=96.74  E-value=0.0053  Score=53.13  Aligned_cols=34  Identities=9%  Similarity=0.107  Sum_probs=27.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeec
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYR   50 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R   50 (303)
                      +.|+||.|.|+ |+||+.++|.|.++ ..+|.++.-
T Consensus        15 ~~~ikVgI~G~-G~iGr~llR~l~~~p~veivaind   49 (354)
T 3cps_A           15 YFQGTLGINGF-GRIGRLVLRACMERNDITVVAIND   49 (354)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred             CcceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecC
Confidence            44679999999 99999999999987 478887754

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.73  E-value=0.00093  Score=59.60  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC---CCceE-EE---ecCCCCHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD---LGQVL-FQ---PYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~---~~~~~-~~---~~Dl~d~~~~~~~~~~~   88 (303)
                      +.+|+|.|+|+ |++|..++..|.+ |++|++++|++.. .+.+..-..   .++++ ++   .+.+.-..++.++++++
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~-v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a  110 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAK-VDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA  110 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHH-HHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHH-hhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence            45789999995 9999999999887 9999999997542 222111000   00000 00   01111122345567889


Q ss_pred             CEEEEcccc
Q psy4233          89 NVVINLIGR   97 (303)
Q Consensus        89 D~vi~~a~~   97 (303)
                      |+||-+...
T Consensus       111 DvViiaVPt  119 (432)
T 3pid_A          111 DYVIIATPT  119 (432)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEeCCC
Confidence            999988764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.73  E-value=0.0065  Score=50.19  Aligned_cols=106  Identities=12%  Similarity=0.122  Sum_probs=65.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc------------------c----chhcCCCCceEEEe
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR------------------D----LRLCGDLGQVLFQP   72 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~------------------~----~~~~~~~~~~~~~~   72 (303)
                      +...+|+|.|+ |-+|+++++.|...|. +++++++..-+...                  .    +......-+++.+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34679999997 6699999999999994 67777554211100                  0    00000011244555


Q ss_pred             cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      .++ +.+.+.+.++++|+||.+....             ..-..+-++|.+.++ .+|..+..+.
T Consensus       105 ~~~-~~~~~~~~~~~~DvVi~~~d~~-------------~~r~~l~~~~~~~~~-p~i~~~~~g~  154 (251)
T 1zud_1          105 QRL-TGEALKDAVARADVVLDCTDNM-------------ATRQEINAACVALNT-PLITASAVGF  154 (251)
T ss_dssp             SCC-CHHHHHHHHHHCSEEEECCSSH-------------HHHHHHHHHHHHTTC-CEEEEEEEBT
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCCH-------------HHHHHHHHHHHHhCC-CEEEEecccc
Confidence            554 4466778888999999986421             112246677777775 6777665443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.73  E-value=0.00042  Score=58.60  Aligned_cols=78  Identities=14%  Similarity=0.069  Sum_probs=49.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC--CceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL--GQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ++++++++|+|+ |.+|+.++..|++.| +|++..|+.....+........  ... .+.+|+.+.   .+.+.++|+||
T Consensus       125 ~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilV  198 (287)
T 1nvt_A          125 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIII  198 (287)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEE
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEE
Confidence            356789999998 599999999999999 9999988743221111110000  000 011222221   33456799999


Q ss_pred             EccccC
Q psy4233          93 NLIGRE   98 (303)
Q Consensus        93 ~~a~~~   98 (303)
                      ++++..
T Consensus       199 n~ag~~  204 (287)
T 1nvt_A          199 NATPIG  204 (287)
T ss_dssp             ECSCTT
T ss_pred             ECCCCC
Confidence            999864

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.73  E-value=0.0006  Score=60.61  Aligned_cols=73  Identities=23%  Similarity=0.249  Sum_probs=51.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..+++|+|+|+ |-+|+.+++.|...|. +|++.+|+.....+.....+    .+.  .   +.+++.+.+.++|+||.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g----~~~--~---~~~~l~~~l~~aDvVi~a  234 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GEA--V---RFDELVDHLARSDVVVSA  234 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CEE--C---CGGGHHHHHHTCSEEEEC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----Cce--e---cHHhHHHHhcCCCEEEEc
Confidence            46789999997 9999999999999997 89999987533212111111    222  1   233566677899999999


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .+..
T Consensus       235 t~~~  238 (404)
T 1gpj_A          235 TAAP  238 (404)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            7643

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.72  E-value=0.0058  Score=52.21  Aligned_cols=69  Identities=19%  Similarity=0.199  Sum_probs=52.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+..+++|.|+| .|.||+.+++.|...|++|++.+|+.... +         ++....    ..+++.++++++|+|+.
T Consensus       135 ~~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-~---------~~~~~~----~~~~l~ell~~aDiV~l  199 (315)
T 3pp8_A          135 YTREEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSW-P---------GVESYV----GREELRAFLNQTRVLIN  199 (315)
T ss_dssp             CCSTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCC-T---------TCEEEE----SHHHHHHHHHTCSEEEE
T ss_pred             CCcCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhh-h---------hhhhhc----ccCCHHHHHhhCCEEEE
Confidence            346789999999 59999999999999999999999975421 1         122111    23678899999999997


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus       200 ~~Pl  203 (315)
T 3pp8_A          200 LLPN  203 (315)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            7653

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.72  E-value=0.0052  Score=51.65  Aligned_cols=58  Identities=22%  Similarity=0.351  Sum_probs=49.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH--HHhcccCEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR--KAIKYSNVVI   92 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~--~~~~~~D~vi   92 (303)
                      ++.+++++|+|++|.+|..++..|++.|..|+++.|+..                          ++.  +.++++|+||
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------------------~l~l~~~~~~ADIVI  215 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------------------TEDMIDYLRTADIVI  215 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------------------HHHHHHHHHTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------------------CchhhhhhccCCEEE
Confidence            457899999999999999999999999999999877421                          233  7788999999


Q ss_pred             EccccC
Q psy4233          93 NLIGRE   98 (303)
Q Consensus        93 ~~a~~~   98 (303)
                      .+.+..
T Consensus       216 ~Avg~p  221 (300)
T 4a26_A          216 AAMGQP  221 (300)
T ss_dssp             ECSCCT
T ss_pred             ECCCCC
Confidence            999864

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.72  E-value=0.0027  Score=50.92  Aligned_cols=36  Identities=25%  Similarity=0.482  Sum_probs=30.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..+|+|.|+| +|.+|+.++..|.+.|++|++.+|++
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            3478999999 69999999999999999999998863

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.72  E-value=0.0013  Score=56.35  Aligned_cols=72  Identities=17%  Similarity=0.029  Sum_probs=48.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~v   91 (303)
                      +++.|+|.|+| .|.+|..+++.|.+.|+  +|++.+|++... +.....+   -+.....|      +.+ +++++|+|
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~-~~a~~~G---~~~~~~~~------~~~~~~~~aDvV   98 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI-SKAVDLG---IIDEGTTS------IAKVEDFSPDFV   98 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH-HHHHHTT---SCSEEESC------TTGGGGGCCSEE
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHCC---CcchhcCC------HHHHhhccCCEE
Confidence            34568999999 69999999999999998  999999875332 2222111   01011112      234 56789999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      |.+...
T Consensus        99 ilavp~  104 (314)
T 3ggo_A           99 MLSSPV  104 (314)
T ss_dssp             EECSCG
T ss_pred             EEeCCH
Confidence            988754

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.71  E-value=0.0061  Score=54.94  Aligned_cols=75  Identities=15%  Similarity=0.105  Sum_probs=54.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc---cccchhcCCCCceEEEecCCCCHHHHHHHhcc-cCE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD---VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-SNV   90 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~   90 (303)
                      .+++++|+|+|. |-.|..+++.|.++|++|++.+++....   .+.+..    .++++..+.-.  +   ..+.+ +|.
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~----~gi~~~~g~~~--~---~~~~~~~d~   75 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE----EGIKVVCGSHP--L---ELLDEDFCY   75 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH----TTCEEEESCCC--G---GGGGSCEEE
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh----CCCEEEECCCh--H---HhhcCCCCE
Confidence            456789999998 8899999999999999999999865321   122222    35777776532  2   23456 999


Q ss_pred             EEEccccCc
Q psy4233          91 VINLIGREF   99 (303)
Q Consensus        91 vi~~a~~~~   99 (303)
                      ||...|...
T Consensus        76 vv~spgi~~   84 (451)
T 3lk7_A           76 MIKNPGIPY   84 (451)
T ss_dssp             EEECTTSCT
T ss_pred             EEECCcCCC
Confidence            999988743

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=96.70  E-value=0.013  Score=49.53  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=54.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~   96 (303)
                      .+++|.|+||..|+.+++.+++.|++++..+. +....+..      .++..       ..++.++.+  ++|+++.+..
T Consensus        14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~Vn-P~~~g~~i------~G~~v-------y~sl~el~~~~~~Dv~ii~vp   79 (294)
T 2yv1_A           14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVT-PGKGGQNV------HGVPV-------FDTVKEAVKETDANASVIFVP   79 (294)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCEEEEEC-TTCTTCEE------TTEEE-------ESSHHHHHHHHCCCEEEECCC
T ss_pred             CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeC-CCCCCceE------CCEee-------eCCHHHHhhcCCCCEEEEccC
Confidence            47888999999999999999999988443333 32111110      11221       122334444  7999997764


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ..              .+..+++.|.+.|++.+|.+++
T Consensus        80 ~~--------------~~~~~v~ea~~~Gi~~vVi~t~  103 (294)
T 2yv1_A           80 AP--------------FAKDAVFEAIDAGIELIVVITE  103 (294)
T ss_dssp             HH--------------HHHHHHHHHHHTTCSEEEECCS
T ss_pred             HH--------------HHHHHHHHHHHCCCCEEEEECC
Confidence            32              2235777788889866665553

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.70  E-value=0.0018  Score=55.45  Aligned_cols=68  Identities=15%  Similarity=0.107  Sum_probs=47.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +++|+|.|+|+ |.+|+.+++.|.+.|++|++.+|+.... +.+...    ++..    ..+   ..+.++++|+||-+.
T Consensus        28 ~~~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~-~~~~~~----g~~~----~~~---~~~~~~~~DvVi~av   94 (316)
T 2uyy_A           28 PTDKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKC-DLFIQE----GARL----GRT---PAEVVSTCDITFACV   94 (316)
T ss_dssp             CCSSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGG-HHHHHT----TCEE----CSC---HHHHHHHCSEEEECC
T ss_pred             CCCCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHc----CCEE----cCC---HHHHHhcCCEEEEeC
Confidence            34589999995 9999999999999999999998875432 222211    1221    112   334556789998887


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      .
T Consensus        95 ~   95 (316)
T 2uyy_A           95 S   95 (316)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.69  E-value=0.0012  Score=56.03  Aligned_cols=66  Identities=17%  Similarity=0.260  Sum_probs=45.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +|+|.|+| .|.+|..+++.|.+.|++|++.+|++.. .+.+...    ++..    ..+   +.++++++|+||.+..
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~-~~~~~~~----g~~~----~~~---~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEA-IADVIAA----GAET----AST---AKAIAEQCDVIITMLP   70 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT----TCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHH-HHHHHHC----CCee----cCC---HHHHHhCCCEEEEECC
Confidence            36999999 5999999999999999999999886432 2222211    2221    122   3345667999998875

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.69  E-value=0.0057  Score=52.10  Aligned_cols=83  Identities=18%  Similarity=0.122  Sum_probs=56.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceE-EEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL-FQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ...+++++|+|++..+|+.+++.|+..|..|+++.|+.....+.......  ..+ ......++.+++.+.+.++|+||.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~--~~~~~t~~~~t~~~~L~e~l~~ADIVIs  251 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL--NKHHVEDLGEYSEDLLKKCSLDSDVVIT  251 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC--CCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh--hcccccccccccHhHHHHHhccCCEEEE
Confidence            46789999999988999999999999999999998863322221111110  011 000011345789999999999999


Q ss_pred             ccccCc
Q psy4233          94 LIGREF   99 (303)
Q Consensus        94 ~a~~~~   99 (303)
                      +.+...
T Consensus       252 Atg~p~  257 (320)
T 1edz_A          252 GVPSEN  257 (320)
T ss_dssp             CCCCTT
T ss_pred             CCCCCc
Confidence            998643

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.69  E-value=0.0024  Score=48.00  Aligned_cols=84  Identities=10%  Similarity=-0.056  Sum_probs=53.1

Q ss_pred             CcEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +++|+|+|++   |.+|..+++.|++.|++|+.+....    +.+      .++. +.-++      .++-..+|.++-+
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~----~~i------~G~~-~y~sl------~~l~~~vDlvvi~   84 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY----EEV------LGRK-CYPSV------LDIPDKIEVVDLF   84 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC----SEE------TTEE-CBSSG------GGCSSCCSEEEEC
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC----CeE------CCee-ccCCH------HHcCCCCCEEEEE
Confidence            6789999998   8999999999999999866653321    111      0111 11112      2222368988877


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      ....              ....+++.|.+.|++.+++.
T Consensus        85 vp~~--------------~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           85 VKPK--------------LTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             SCHH--------------HHHHHHHHHHHHTCSEEEEC
T ss_pred             eCHH--------------HHHHHHHHHHHcCCCEEEEC
Confidence            5431              12356777777888766544

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.68  E-value=0.00084  Score=60.98  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=31.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .|||.|+| +|++|..++..|.+.|++|++++|+..
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~   42 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQA   42 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            47999999 599999999999999999999998743

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...

Probab=96.68  E-value=0.004  Score=56.06  Aligned_cols=71  Identities=10%  Similarity=-0.096  Sum_probs=48.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhc--cc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIK--YS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~   88 (303)
                      |++|||+|+ |.+|..+++++.+.|++|+++..............     -+.+..       |..|.+.+.++.+  ++
T Consensus         2 ~k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~a-----d~~~~~~p~~~~~~~~d~~~l~~~~~~~~~   75 (449)
T 2w70_A            2 LDKIVIANR-GEIALRILRACKELGIKTVAVHSSADRDLKHVLLA-----DETVCIGPAPSVKSYLNIPAIISAAEITGA   75 (449)
T ss_dssp             CSEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHS-----SEEEEEECSSGGGTTTCHHHHHHHHHHHTC
T ss_pred             CceEEEeCC-cHHHHHHHHHHHHcCCeEEEEeccccccCchhhhC-----CEEEEcCCCCccccccCHHHHHHHHHHcCC
Confidence            579999996 89999999999999999998865432211111110     122222       7778888887774  58


Q ss_pred             CEEEEc
Q psy4233          89 NVVINL   94 (303)
Q Consensus        89 D~vi~~   94 (303)
                      |+|+-.
T Consensus        76 d~v~~~   81 (449)
T 2w70_A           76 VAIHPG   81 (449)
T ss_dssp             CEEECC
T ss_pred             CEEEEC
Confidence            988754

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.66  E-value=0.0018  Score=56.47  Aligned_cols=72  Identities=19%  Similarity=0.240  Sum_probs=46.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |++|+|.|+| .|.+|..+++.|++.|++|++.+|++.. .+.+...    ++.    ...+.+++.+..+.+|+||.+.
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~-~~~l~~~----g~~----~~~s~~e~~~~a~~~DvVi~~v   89 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNA-VQALERE----GIA----GARSIEEFCAKLVKPRVVWLMV   89 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHTT----TCB----CCSSHHHHHHHSCSSCEEEECS
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHH-HHHHHHC----CCE----EeCCHHHHHhcCCCCCEEEEeC
Confidence            3468999999 6999999999999999999999997533 2222211    111    1123443333323349998886


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      ..
T Consensus        90 p~   91 (358)
T 4e21_A           90 PA   91 (358)
T ss_dssp             CG
T ss_pred             CH
Confidence            54

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.66  E-value=0.0037  Score=55.40  Aligned_cols=76  Identities=12%  Similarity=0.060  Sum_probs=52.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCC-------------CH----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-------------ND----   78 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------d~----   78 (303)
                      +.+++|+|+|+ |-+|..+++.+...|.+|++++|+.... +.....    +.+++..|..             +.    
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~-~~~~~l----Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~  243 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQSM----GAEFLELDFKEEAGSGDGYAKVMSDAFIK  243 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGH-HHHHHT----TCEECCC--------CCHHHHHHSHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHc----CCEEEEecccccccccccchhhccHHHHH
Confidence            45789999996 9999999999999999999999875432 222211    2333322221             11    


Q ss_pred             ---HHHHHHhcccCEEEEcccc
Q psy4233          79 ---DEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        79 ---~~~~~~~~~~D~vi~~a~~   97 (303)
                         +.+.+.++++|+||.+++.
T Consensus       244 ~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          244 AEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcc
Confidence               1466777889999999754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.66  E-value=0.0029  Score=52.95  Aligned_cols=74  Identities=11%  Similarity=0.054  Sum_probs=49.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +..+++++|+|+ |.+|+.++..|.+.|. +|+++.|+..+..+....... ..+..+.  +.+..   .  .++|+||+
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~~--~~~l~---~--~~~DivIn  187 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-SRLRISR--YEALE---G--QSFDIVVN  187 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-TTEEEEC--SGGGT---T--CCCSEEEE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-CCeeEee--HHHhc---c--cCCCEEEE
Confidence            356889999997 8899999999999995 899999975433222222111 1233332  22211   1  57999999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +.+.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9765

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.004  Score=54.83  Aligned_cols=104  Identities=11%  Similarity=0.026  Sum_probs=66.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecC----------------CCC--
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH----------------PRN--   77 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~D----------------l~d--   77 (303)
                      ..+.+|+|+|+ |-+|...++.+...|.+|+++++++... +.....    +.+++..+                +++  
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l-~~~~~~----G~~~~~~~~~~~~d~~~~~~ya~e~s~~~  261 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAK-EQVASL----GAKFIAVEDEEFKAAETAGGYAKEMSGEY  261 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHH-HHHHHT----TCEECCCCC-----------------CHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHc----CCceeecccccccccccccchhhhcchhh
Confidence            35679999997 9999999999999999999999986432 222211    12333222                122  


Q ss_pred             ----HHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          78 ----DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        78 ----~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                          .+.+.++++++|+||.++.......+...       ++..++.++...  -+|-+|.
T Consensus       262 ~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lv-------t~emv~~Mk~Gs--VIVDvA~  313 (405)
T 4dio_A          262 QVKQAALVAEHIAKQDIVITTALIPGRPAPRLV-------TREMLDSMKPGS--VVVDLAV  313 (405)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCB-------CHHHHTTSCTTC--EEEETTG
T ss_pred             hhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEe-------cHHHHhcCCCCC--EEEEEeC
Confidence                35788889999999999865443333222       234555555322  3555553

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.64  E-value=0.0012  Score=56.28  Aligned_cols=67  Identities=22%  Similarity=0.189  Sum_probs=46.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+|++... +.+...    ++.       ..+++.++++++|+||-+..
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~-~~~~~~----g~~-------~~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKA-AALVAA----GAH-------LCESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH-HHHHHH----TCE-------ECSSHHHHHHHSSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHC----CCe-------ecCCHHHHHhcCCEEEEEeC
Confidence            467999998 59999999999999999999999875432 222211    111       11234455667888887765

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.63  E-value=0.0032  Score=53.50  Aligned_cols=72  Identities=18%  Similarity=0.291  Sum_probs=52.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.+++|+|+|+ |.+|+.+++.|...|.+|++.+|+.... +.....    +++.+     +.+++.++++++|+|+.+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~-~~~~~~----g~~~~-----~~~~l~~~l~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL-ARITEM----GLVPF-----HTDELKEHVKDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT----TCEEE-----EGGGHHHHSTTCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHC----CCeEE-----chhhHHHHhhCCCEEEEC
Confidence            467889999996 9999999999999999999999975321 211111    23322     224577788899999998


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      ...
T Consensus       223 ~p~  225 (300)
T 2rir_A          223 IPS  225 (300)
T ss_dssp             CSS
T ss_pred             CCh
Confidence            775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	303
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-13
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-13
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-12
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-11
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-11
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	7e-11
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-10
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-10
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-07
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-06
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	6e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	9e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.001
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.002

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (157), Expect = 3e-13
 Identities = 24/218 (11%), Positives = 57/218 (26%), Gaps = 29/218 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           +FGA+G  G     +  + G ++ +  R +                           ++ 
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
           K +   + VI L+G      + +      E    +    K  GV+K +  ++     +P 
Sbjct: 63  KTVAGQDAVIVLLG---TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT 119

Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG---SGDKFLRYYGHMWRHVFRK 199
                          +  K +     +     P  +     +G   +   G         
Sbjct: 120 KVPPR-LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPS----- 173

Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
                       + +   D+   ++      +  G   
Sbjct: 174 ------------RVISKHDLGHFMLRCLTTDEYDGHST 199

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 31/272 (11%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + G +G++GS+L +KL   G ++ +    NF+  R   +   +G    + +   N D + 
Sbjct: 6   ITGGAGFVGSHLTDKLMMDGHEVTV--VDNFFTGRKRNVEHWIG---HENFELINHDVVE 60

Query: 83  KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS----- 133
                 + + +L        +          N      +  L+K +G  + +  S     
Sbjct: 61  PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVY 119

Query: 134 ------ALNADPNPPTYYISGGSQFYRTKYQGEKEVL----REFPEATIFRPSDMYGSGD 183
                   + D       I   + +   K   E        +E  E  + R  + +G   
Sbjct: 120 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 179

Query: 184 KF--LRYYGHMWRHVF--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
                R   +          L VY  G +T +   YV D+   +VA   + + +  +   
Sbjct: 180 HMNDGRVVSNFILQALQGEPLTVYGSGSQT-RAFQYVSDLVNGLVALM-NSNVSSPVNLG 237

Query: 240 VGPKRYLLSELLDWFHVVMKKGEPDYGYYRYD 271
              +  +L       ++V    E  +     D
Sbjct: 238 NPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD 269

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 63.6 bits (154), Expect = 4e-12
 Identities = 45/296 (15%), Positives = 89/296 (30%), Gaps = 41/296 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDE 80
           + G +G++GS +   + K     ++      Y      L        +   H    +  E
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAE 64

Query: 81  IRKAIKYSN--VVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVE------- 127
           I +  +      V++L          T      + N+     L  ++++           
Sbjct: 65  ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKN 124

Query: 128 --KFIHISALNADPNPPTYYISGGSQFY----------------RTKYQGEKEVL----R 165
             +F HIS      + P       S                    +K   +  V      
Sbjct: 125 NFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT 184

Query: 166 EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF--RKLAVYKKGEETIKQPVYVGDVAAAI 223
                 +   S+ YG      +    +  +    + L +Y KG + I+  +YV D A A+
Sbjct: 185 YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG-DQIRDWLYVEDHARAL 243

Query: 224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMP 279
                +   AG+ Y   G       +++     ++ +  P    YR  + Y    P
Sbjct: 244 HMVVTE-GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRP 298

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 63.3 bits (153), Expect = 5e-12
 Identities = 37/268 (13%), Positives = 80/268 (29%), Gaps = 25/268 (9%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-------VRDLRLCGDLGQVLFQPYHP 75
           V G +G++GS+   +L       +        D         +L       ++ F     
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64

Query: 76  RNDDEIRKAIKYSNVVINL----IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
           R+   + + ++  + +++                  + NV+    L + + + GV + +H
Sbjct: 65  RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVH 124

Query: 132 ISALNADPNPPTYYISGGSQFY------RTKYQGEKEVL---REFP-EATIFRPSDMYGS 181
           +S      +  +   +  S          +K   +       R +  +  I R  + YG 
Sbjct: 125 VSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGP 184

Query: 182 GDKFLRYYGHMWRHVF--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
                +       ++     L +Y  G    ++ V+  D    I         AG+IY  
Sbjct: 185 YQHPEKLIPLFVTNLLDGGTLPLYGDGANV-REWVHTDDHCRGIALVLAGG-RAGEIYHI 242

Query: 240 VGPKRYLLSELLDWFHVVMKKGEPDYGY 267
            G       EL       +         
Sbjct: 243 GGGLELTNRELTGILLDSLGADWSSVRK 270

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.4 bits (147), Expect = 1e-11
 Identities = 31/246 (12%), Positives = 60/246 (24%), Gaps = 27/246 (10%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           V GASG  G  +  KL +   + +   +G     +     G    V        +     
Sbjct: 8   VTGASGRTGQIVYKKLKEGSDKFVA--KGLVRSAQGKEKIGGEADVFIGDITDADSINPA 65

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLS---------------KEMGVE 127
                + V++     +             E      +                 K  GV+
Sbjct: 66  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125

Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
             + + ++            G       K + E+ +       TI R   +         
Sbjct: 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE 185

Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
                   + +          T  + V   DVA   + A    +A  K +          
Sbjct: 186 LLVGKDDELLQ----------TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTS 235

Query: 248 SELLDW 253
           +   D+
Sbjct: 236 TPTKDF 241

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 60.6 bits (145), Expect = 3e-11
 Identities = 37/240 (15%), Positives = 72/240 (30%), Gaps = 8/240 (3%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
           + G +GY+G  + N     G    + +R     ++  +++     Q+  +      DD  
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 82  RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
           R       V + +        +  I +    + A      KE G  K    S    DP+ 
Sbjct: 68  RLVDALKQVDVVISALAGGVLSHHILEQLKLVEA-----IKEAGNIKRFLPSEFGMDPDI 122

Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
             + +  GS  +  K +  + +       T    +   G     L            K  
Sbjct: 123 MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK-V 181

Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDWFHVVMKK 260
           +           V   DV    + +  DP    K      P   L   E++  +  + ++
Sbjct: 182 LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 241

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 59.5 bits (143), Expect = 7e-11
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 27/190 (14%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + G  G +GS +  +L ++G   ++    +  ++ D R   D     F       D    
Sbjct: 7   IAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHD----FFASERI--DQVYL 60

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
            A K   +V N                N+ I + +   + +  V K + + +    P   
Sbjct: 61  AAAKVGGIVANNTYPADFIYQ------NMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLA 114

Query: 143 TYYISGGSQFY-----------RTKYQGEKEVL---REFP-EATIFRPSDMYGSGDKFLR 187
              ++                   K  G K      R++  +     P+++YG  D F  
Sbjct: 115 KQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHP 174

Query: 188 YYGHMWRHVF 197
              H+   + 
Sbjct: 175 SNSHVIPALL 184

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (137), Expect = 2e-10
 Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 19/218 (8%)

Query: 23  VFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
           + GASG  G  L  ++ +QG  S++ +  R       +     +   V F+         
Sbjct: 19  ILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF 78

Query: 81  IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
               + +  +                   + +   + A L+K  G + F  +S+  AD +
Sbjct: 79  QGHDVGFCCLGTTRGKAGAEGFV----RVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 141 PPTYYISGGSQFYRTKYQ-GEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
                      + + K +   K    +F   ++FRP  +     +  R    + R  F  
Sbjct: 135 SN-------FLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGS 186

Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
           L             V V  V  A++     P       
Sbjct: 187 LPDSWAS----GHSVPVVTVVRAMLNNVVRPRDKQMEL 220

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 57.5 bits (137), Expect = 4e-10
 Identities = 36/239 (15%), Positives = 66/239 (27%), Gaps = 11/239 (4%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+GY+G ++       G    +        VR+     +  +         +   I 
Sbjct: 8   LIGATGYIGRHVAKASLDLGHPTFLL-------VRESTASSNSEKAQLLESFKASGANIV 60

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
                 +  +    +       T+    +E    + +  KE+G  K    S    D +  
Sbjct: 61  HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV 120

Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
                  S F               P  T    +   G   + L   G       + + +
Sbjct: 121 HAVEPAKSVFEVKAKVRRAIEAEGIPY-TYVSSNCFAGYFLRSLAQAGLTAPPRDKVVIL 179

Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-LSELLDWFHVVMKK 260
                      V   D+    + A  DP    K      P   L L+EL+  +   + K
Sbjct: 180 GDG--NARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK 236

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 55.9 bits (133), Expect = 6e-10
 Identities = 27/218 (12%), Positives = 59/218 (27%), Gaps = 27/218 (12%)

Query: 23  VFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
           + GA+G  G +L +++  +   +++I P R    +   L         L        D  
Sbjct: 7   LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTA 66

Query: 81  IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
                       +         +                    +G       +      +
Sbjct: 67  FCCLGTTIKEAGSEEAFRAVDFDLP----------------LAVGKRALEMGARHYLVVS 110

Query: 141 PPTYYISGGSQFYRTKYQ-GEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
                      + R K +  +    + +P+ TI RPS ++G  ++F        R     
Sbjct: 111 ALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEF--------RLAEIL 162

Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
            A   +        +   D+A A+     +     +  
Sbjct: 163 AAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFV 200

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 49.0 bits (116), Expect = 3e-07
 Identities = 32/285 (11%), Positives = 73/285 (25%), Gaps = 32/285 (11%)

Query: 20  VATVFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
           VA + G +G  GSYL   L ++G ++          N   V  +          F  ++ 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 76  --RNDDEIRKAIKYSNVVINLIG------REFATKNFTIADANVEIPARLARLSKEMGVE 127
              +   + + ++                          AD +     RL    + +G+E
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 128 K---FIHIS------ALNADPNPPTYYISGGSQFYRTKYQGEKEVL---REFP-EATIFR 174
           K   F   S       +   P   T      S +   K       +     +   A    
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGI 182

Query: 175 PSDMYGSGDKFLRYYGHMWRHVFRKLA-----VYKKGEETIKQPVYVGDVAAAIVAACKD 229
             +              + R +          +Y    ++++   +  D         + 
Sbjct: 183 LFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ 242

Query: 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRY 274
                + +      +Y + + ++     +       G    +   
Sbjct: 243 E--QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGI 285

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 48.5 bits (114), Expect = 4e-07
 Identities = 30/243 (12%), Positives = 64/243 (26%), Gaps = 17/243 (6%)

Query: 22  TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
            V GA+G  G+ L       G  +      +   +    L       LFQ     N   +
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLIAEELQAIPNVTLFQGPLLNNVPLM 65

Query: 82  RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
               + +++              + A   + I   LA  +K  G  +    S++      
Sbjct: 66  DTLFEGAHLAFINT--------TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS--GDKFLRYYGHMWRHVFRK 199
             +        +  K+  E  V +    +T         +     +  +   +      +
Sbjct: 118 GPWP---AVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFE 174

Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA--AGKIYQAVGPKRYLLSELLDWFHVV 257
                  +  +       DV  A++   KD      G              ++   F   
Sbjct: 175 WHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQVCAAFSRA 233

Query: 258 MKK 260
           + +
Sbjct: 234 LNR 236

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.9 bits (105), Expect = 5e-06
 Identities = 34/269 (12%), Positives = 78/269 (28%), Gaps = 35/269 (13%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA G++ S++  +L  +G  +I         + +   C +     F     R  +   
Sbjct: 20  ITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDE-----FHLVDLRVMENCL 74

Query: 83  KAIKYSNVV-----INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
           K  +  + V              + +  I   N  I   +   ++  G+++F + S+   
Sbjct: 75  KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACI 134

Query: 138 DPNPPTYYISGGSQFY-------------RTKYQGEKEVL---REFP-EATIFRPSDMYG 180
            P       +  S                  K   E+      ++F  E  I R  ++YG
Sbjct: 135 YPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYG 194

Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGE------ETIKQPVYVGDVAAAIVAACKDPDAAG 234
               +            RK                 +   ++ +    ++   K      
Sbjct: 195 PFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FR 252

Query: 235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
           +       +   ++E+ +      +K  P
Sbjct: 253 EPVNIGSDEMVSMNEMAEMVLSFEEKKLP 281

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 44.6 bits (104), Expect = 7e-06
 Identities = 31/270 (11%), Positives = 69/270 (25%), Gaps = 30/270 (11%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY---------------------DVRDLRL 61
           V G +G++GS   + +      + +                            D+ D  L
Sbjct: 7   VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAEL 66

Query: 62  CGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIGREFATKNFTIADANVEIPARLAR 119
              L        H   +     ++      +  N IG     +     D      +    
Sbjct: 67  VDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEV 126

Query: 120 LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVL----REFPEATIFRP 175
                  E          +        +  S +  TK   +  V         +ATI   
Sbjct: 127 YGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNC 186

Query: 176 SDMYGSGDKFLRYYGHMWRHVF--RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233
           S+ YG      ++      ++    K  +Y +G + ++  ++  D +  + A        
Sbjct: 187 SNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG-KNVRDWIHTNDHSTGVWAILTKGRMG 245

Query: 234 GKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
                    ++     L      + +  + 
Sbjct: 246 ETYLIGADGEKNNKEVLELILEKMGQPKDA 275

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.8 bits (102), Expect = 1e-05
 Identities = 41/270 (15%), Positives = 86/270 (31%), Gaps = 28/270 (10%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII------PYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
           + G +G++GS L   L K   +++        ++ N  +VR L          F     R
Sbjct: 21  ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIR 80

Query: 77  NDDEIRKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
           N D+   A    + V++               T    N++    +   +++  V+ F + 
Sbjct: 81  NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYA 140

Query: 133 SALNADPNPPTYYISGGSQF-----YRTKYQGEKEVLREFPE-----ATIFRPSDMYGSG 182
           ++ +   + P       +       Y       +     F           R  +++G  
Sbjct: 141 ASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRR 200

Query: 183 DKFLRYYGHMWRHVFRKLA------VYKKGEETIKQPVYVGDVA-AAIVAACKDPDAAGK 235
                 Y  +       +       +   G ET +   Y+ +   A ++AA    DA  +
Sbjct: 201 QDPNGAYAAVIPKWTSSMIQGDDVYINGDG-ETSRDFCYIENTVQANLLAATAGLDARNQ 259

Query: 236 IYQAVGPKRYLLSELLDWFHVVMKKGEPDY 265
           +Y      R  L++L       + +    Y
Sbjct: 260 VYNIAVGGRTSLNQLFFALRDGLAENGVSY 289

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 38/198 (19%), Positives = 63/198 (31%), Gaps = 22/198 (11%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDE 80
           V G SGY+GS+ C +L + G  +II           L +   LG           RN+  
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL 64

Query: 81  IRKAIKYSN--VVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
           + + +       VI+  G     E   K     D NV    RL    +   V+ FI  S+
Sbjct: 65  MTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124

Query: 135 LNADPNPPTYYISGGSQFY--RTKYQGEKEVLREFPEA----------TIFRPSDMYGSG 182
                + P             ++ Y   K ++ +               + R  +  G+ 
Sbjct: 125 ATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH 184

Query: 183 DKFLRYYGHMWRHVFRKL 200
                  G   + +   L
Sbjct: 185 PSGD--MGEDPQGIPNNL 200

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 41.3 bits (95), Expect = 6e-05
 Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 9/173 (5%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
           + GA+G +G  +  +L  +  ++I     +  D+ ++          F    P   + + 
Sbjct: 6   ITGANGQLGREIQKQLKGKNVEVIPTDVQDL-DITNVLAVNK----FFNEKKP---NVVI 57

Query: 83  KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
               ++ V       + A K   I   N+   A             ++            
Sbjct: 58  NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF 117

Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
                  S + +TK +GE  V    P+  I R + +YG G+ F++   ++ + 
Sbjct: 118 DEVNP-QSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKT 169

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 9e-05
 Identities = 30/204 (14%), Positives = 48/204 (23%), Gaps = 26/204 (12%)

Query: 20  VATVFGASGYMGSYLCNKLGKQGSQIII-------PYRGNFYDVRDLRLCGDLGQVLFQP 72
           VA + G +G  GSYL   L ++G ++            G    +         G +    
Sbjct: 3   VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62

Query: 73  YHPRNDDEIRKAIKYSNVVINLIGREFA------TKNFTIADANVEIPARLARLSKEMGV 126
               +   + K I              +            AD +     RL    K  G+
Sbjct: 63  GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122

Query: 127 E---KFIHISALNADPNPPTYYISGGSQFY------RTKYQGEKEVL---REFP-EATIF 173
               KF   S                + FY        K      V+     +   A   
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 182

Query: 174 RPSDMYGSGDKFLRYYGHMWRHVF 197
              +              + R V 
Sbjct: 183 ILFNHESPRRGANFVTRKISRSVA 206

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 37.6 bits (85), Expect = 0.001
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLC 62
          +FG +G +G  L   L   G+ I +      +  D  + +  
Sbjct: 5  LFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGV 46

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 17/183 (9%)

Query: 23  VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
           + G  G++GS L +    QG  +I+      +G   ++  L     LG   F     RN 
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNK 61

Query: 79  DEIRKAIKYSN--VVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHI 132
           +++ + I         +L G+   T +        + NV     L    ++      I  
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
           S+ N        Y                +    + E+T       YG        Y   
Sbjct: 122 SSTNKVYGDLEQYK----YNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 193 WRH 195
           +  
Sbjct: 178 YAR 180

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	303
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.98
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.97
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.86
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.86
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.85
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.85
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.85
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.85
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.85
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.84
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.84
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.84
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.84
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.83
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.83
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.83
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.83
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.82
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.82
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.82
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.82
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.82
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.81
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.81
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.81
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.8
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.8
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.8
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.8
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.8
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.79
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.79
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.79
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.79
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.79
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.78
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.77
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.77
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.77
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.76
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.76
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.75
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.73
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.73
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.72
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.71
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.7
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.7
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.7
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.69
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.67
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.65
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.64
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.64
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.63
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.61
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.59
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.58
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.55
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.54
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.53
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.43
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.35
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.27
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.67
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.61
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.55
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.51
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.44
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.42
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.23
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.22
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.21
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.16
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.12
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.1
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.04
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.02
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.01
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.01
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.0
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.0
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.98
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.94
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.91
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.88
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.87
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.85
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.84
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.83
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.82
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.8
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.8
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.78
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.77
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.75
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.75
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.71
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.7
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.7
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.68
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.67
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.62
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.55
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.49
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.46
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.43
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.38
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.37
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.35
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.35
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.3
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.3
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.26
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.25
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.24
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.22
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.21
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.15
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.14
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.11
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.99
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.97
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.94
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.9
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.88
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.83
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.78
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.73
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.69
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.64
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.61
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.55
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.54
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.52
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.51
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.5
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.48
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.45
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.44
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.39
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.37
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.35
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.31
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.31
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.3
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.3
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.28
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.28
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.26
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.21
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.17
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.17
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.17
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.13
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.13
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.12
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.05
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.98
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.96
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.95
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.94
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.92
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.88
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.87
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.83
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.8
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.8
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.76
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.75
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.71
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.71
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.68
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.66
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.64
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.64
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.63
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.58
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.58
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.53
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.48
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.46
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.36
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.35
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.26
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.13
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.07
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.02
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.99
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.89
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.88
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.86
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.83
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.81
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.77
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.68
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	94.55
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.53
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.51
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.37
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.37
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.17
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.14
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	94.14
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.14
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.13
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.12
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.05
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.83
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.64
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.5
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.42
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.4
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.37
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.31
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.05
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.04
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.88
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.87
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.84
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.82
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	92.8
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.58
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.46
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	92.45
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.32
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.2
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.03
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.99
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.71
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.69
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.64
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.59
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	91.55
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	91.54
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.5
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.35
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.13
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	90.99
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.96
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	90.68
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.64
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.56
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.5
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.96
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	89.93
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	89.79
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.5
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.05
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.72
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.68
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	88.56
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.53
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	88.5
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	88.38
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	88.21
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	88.2
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.97
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.53
d2fzva1	233	Putative arsenical resistance protein {Shigella fl	87.36
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.31
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.15
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.07
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.0
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	86.64
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.61
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	86.16
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	85.88
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	85.88
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.82
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	85.42
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	85.07
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.71
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	84.47
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	84.47
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.81
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.69
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.54
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	83.03
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	82.81
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.71
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.59
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.89
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	81.89
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	81.62
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.58
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.39
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	81.31
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.31
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.22
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.82
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.74
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	80.46

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.9e-40  Score=288.02  Aligned_cols=244  Identities=14%  Similarity=0.123  Sum_probs=204.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEE------eecCC-CcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIII------PYRGN-FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~------~~R~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||||||||||||++|+++|+++|++|.+      +++.. ......+......++++++.+|+.+..........+|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            69999999999999999999999976544      33321 112222233333467999999999999999999999999


Q ss_pred             EEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHH
Q psy4233          92 INLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEK  161 (303)
Q Consensus        92 i~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~  161 (303)
                      +|+|+...    ...+....++|+.++.+++++|.+.+++++||+||..+|+.      +|+.|..|.++|+.+|..+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99997632    24566788999999999999999999999999999999976      466677889999999999999


Q ss_pred             HHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233         162 EVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK  235 (303)
Q Consensus       162 ~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  235 (303)
                      +++.+    +++++++||+.+|||++.....+..++++  .++.+.++++|.+. ++|+|++|+|++++.+++++.. ++
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~-r~~i~v~D~a~ai~~~~~~~~~-~~  238 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV-REWVHTDDHCRGIALVLAGGRA-GE  238 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE-EEEEEHHHHHHHHHHHHHHCCT-TC
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeE-EccEEHHHHHHHHHHHHhCCCC-CC
Confidence            88764    89999999999999987655556665554  66788899999998 8999999999999999987654 77


Q ss_pred             EEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         236 IYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       236 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +||+++++.+++.|+++.+++.+|.+.+.
T Consensus       239 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~  267 (322)
T d1r6da_         239 IYHIGGGLELTNRELTGILLDSLGADWSS  267 (322)
T ss_dssp             EEEECCCCEEEHHHHHHHHHHHHTCCGGG
T ss_pred             eeEEeecccchhHHHHHHHHHHhCCCccc
Confidence            99999999999999999999999987653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-39  Score=281.16  Aligned_cols=240  Identities=13%  Similarity=-0.013  Sum_probs=191.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc----cccch--hcCCCCceEEEecCCCCHHHHHHHhcc--cCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD----VRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIKY--SNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~   90 (303)
                      |+|||||||||||++|+++|+++|++|++++|.....    .+.+.  .....++++++++|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999964321    11111  111235799999999999999999986  699


Q ss_pred             EEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCc---eEEEEecCccCCC------CCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVE---KFIHISALNADPN------PPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~  157 (303)
                      |||+|+...    ..++..++++|+.++.+|+++|++.+++   +|||+||..+|+.      +|+.|..|.++|+.+|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            999998632    3566778999999999999999997754   7999999999975      35566788999999999


Q ss_pred             HHHHHHHhh----CCCEEEEeecceeeCCCc---hhhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         158 QGEKEVLRE----FPEATIFRPSDMYGSGDK---FLRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      .+|++++.+    +++++++||+++|||+..   ....+...+..   .......+|++.+. ++|+|++|+|++++.++
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~-r~~~~v~D~~~a~~~~~  240 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL-RDWGHAKDYVKMQWMML  240 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE-ECCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCee-ecceeechHHHHHHHHH
Confidence            999988774    899999999999999643   22233333322   33445566788888 89999999999999999


Q ss_pred             cCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233         228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  261 (303)
                      +++  .++.||+++++.+|+.|+++.+.+.+|..
T Consensus       241 ~~~--~~~~yni~sg~~~s~~~~~~~~~~~~g~~  272 (357)
T d1db3a_         241 QQE--QPEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (357)
T ss_dssp             SSS--SCCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             hCC--CCCeEEECCCCceehHHHHHHHHHHhCCc
Confidence            864  36799999999999999999999999854

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-38  Score=274.76  Aligned_cols=238  Identities=15%  Similarity=0.125  Sum_probs=192.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      .+||||||||||||++|+++|+++|++|++++|......+.+.......++++...|+.+     .++.++|+|||+|+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-----PLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-----CCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH-----HHHcCCCEEEECccc
Confidence            379999999999999999999999999999988554444444333333456666666543     355689999999986


Q ss_pred             Cc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC-----------CCCCCCCCchhHHHHHHHHH
Q psy4233          98 EF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP-----------TYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        98 ~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-----------~~~~~~~~~y~~~K~~~e~~  162 (303)
                      ..    ...+...+++|+.++.+|+++|++.++ |+||+||..+|+...           ..|..|.++|+.+|.++|.+
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            43    345677899999999999999999987 899999999997532           23456778899999999999


Q ss_pred             HHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         163 VLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       163 ~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      ++.+    +++++++||+.+|||+...  ...+..++..  .++.+.++++|.+. ++|+|++|++++++.+++..  .+
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~-r~~i~v~D~~~~~~~~~~~~--~~  231 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT-RAFQYVSDLVNGLVALMNSN--VS  231 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE-EECEEHHHHHHHHHHHHTSS--CC
T ss_pred             HHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCee-EccEEHHHHHHHHHHHHhhc--cC
Confidence            8763    8999999999999997542  2344444443  67788899999998 89999999999999998754  35


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++||+++++.+++.++++.+++.+|.+.++
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGSEI  261 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCCCE
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCCce
Confidence            589999999999999999999999988775

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=7.7e-39  Score=281.89  Aligned_cols=243  Identities=16%  Similarity=0.180  Sum_probs=198.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC-CC-cccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG-NF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~-~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      |||||||||||||++|+++|+++|++|++..++ .. .....+......++++++++|++|++.+..++++  +|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            699999999999999999999999875554433 22 2222333334446899999999999999998875  8999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcC---------CceEEEEecCccCCCC----------------CCCC
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMG---------VEKFIHISALNADPNP----------------PTYY  145 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~v~~Ss~~~~~~~----------------~~~~  145 (303)
                      |+....    ..+...+++|+.++.+++++|++.+         +++||++||..+|+..                +..+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            986432    3567889999999999999998764         3599999999999752                2344


Q ss_pred             CCCCCchhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHH
Q psy4233         146 ISGGSQFYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       146 ~~~~~~y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ..|.+.|+.+|.++|.++..    ++++++++||+.+|||++.....+..++.+  .++.+.++++|.+. ++|+|++|+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~-r~~i~v~D~  239 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI-RDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCE-EEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeE-EeCEEHHHH
Confidence            56788899999999999977    489999999999999987644455555444  66778889999998 899999999


Q ss_pred             HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      |+++..+++++.. +++||+++++.+++.|+++.+.+.++....
T Consensus       240 a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~  282 (361)
T d1kewa_         240 ARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLDEIVP  282 (361)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhcccccc
Confidence            9999999987644 679999999999999999999998865443

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-37  Score=274.99  Aligned_cols=267  Identities=14%  Similarity=0.092  Sum_probs=208.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ++|||||||||||||++|+++|+++||+|++++|...+.....     ....++..+|+.+.+.+..+++++|+|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----GTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----cccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            5789999999999999999999999999999988655432221     13478899999999999999999999999997


Q ss_pred             cCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------------CCCCCCCCCchhHHHHH
Q psy4233          97 REF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------------PTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        97 ~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------------~~~~~~~~~~y~~~K~~  158 (303)
                      ...     ...+......|+.++.++++++++.+++++|++||..+|+..             +..|..|.++|+.+|.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence            643     355667889999999999999999999999999999998752             22345678899999999


Q ss_pred             HHHHHHhh----CCCEEEEeecceeeCCCch----hhHHHH---HHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         159 GEKEVLRE----FPEATIFRPSDMYGSGDKF----LRYYGH---MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       159 ~e~~~~~~----~~~~~ilrp~~~~G~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|++++.+    +++++++||+.+|||++..    ......   ...........+++|.+. ++|+|++|++++++.++
T Consensus       169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT-RSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCE-ECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeE-EEEeehhHHHHHHHHHH
Confidence            99988763    8999999999999986531    111111   111155667788888888 89999999999999998


Q ss_pred             cCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233         228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM  293 (303)
Q Consensus       228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  293 (303)
                      +++  .+++||+++++.+|+.|+++.+.+.+|++.++ ..+.....+  ........+.+.++|.|.
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~--~~~~d~ska~~~LGw~p~  310 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVR--GRNSDNNLIKEKLGWAPN  310 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCS--BCEECCHHHHHHHSCCCC
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCcc--ccccCHHHHHHHhCCCCC
Confidence            854  36699999999999999999999999988775 222222221  222233344555676665

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8e-38  Score=273.10  Aligned_cols=245  Identities=19%  Similarity=0.145  Sum_probs=193.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      |||||||||||||++|++.|+++|++|++++|...........  .....+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            7899999999999999999999999999998754333222111  1112569999999999999999998  69999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC-------CCCCCCCCchhHHHHHHHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP-------TYYISGGSQFYRTKYQGEKEV  163 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-------~~~~~~~~~y~~~K~~~e~~~  163 (303)
                      |+...    ...+...+++|+.++.+++++|++.+++++|++||..+|+...       ..+..|.++|+.+|..+|+++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            98643    2356688999999999999999999999999999999986532       223467889999999999998


Q ss_pred             Hhh-----CCCEEEEeecceeeCCCch----------hhHHHHHHHh---hhcceeeecC------CCceeeCceeHHHH
Q psy4233         164 LRE-----FPEATIFRPSDMYGSGDKF----------LRYYGHMWRH---VFRKLAVYKK------GEETIKQPVYVGDV  219 (303)
Q Consensus       164 ~~~-----~~~~~ilrp~~~~G~~~~~----------~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~i~~~Dv  219 (303)
                      .+.     +.+++++|++++|||....          ...+..++..   ....+.++|+      |.+. ++|+|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~-rd~i~v~D~  239 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV-RDYIHVMDL  239 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCE-ECEEEHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCce-eeEEEEeeh
Confidence            762     6899999999999985321          1233333322   3445666654      5666 899999999


Q ss_pred             HHHHHHHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         220 AAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       220 a~~~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      +.++..+...  ....+++||+++++++|+.|+++.+.+.+|.+.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~  286 (338)
T d1udca_         240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCE
T ss_pred             hhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCce
Confidence            9888776542  33456799999999999999999999999988765

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=7.7e-37  Score=267.67  Aligned_cols=244  Identities=14%  Similarity=0.104  Sum_probs=199.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc---cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD---VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +||||||||||||||++|+++|+++|++|.++.+...+.   ...... ...++++++.+|+.|.+.+..++.++|.|+|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA-ILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG-GCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH-hhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            489999999999999999999999998866665542211   111111 1125799999999999999999999999999


Q ss_pred             ccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------------------CCCCCCCCCCc
Q psy4233          94 LIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------------------PPTYYISGGSQ  151 (303)
Q Consensus        94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------------~~~~~~~~~~~  151 (303)
                      +|+...    ..++...+++|+.++.+++++++..+. ++|++||..+|+.                  .+..+..|.++
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~  158 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP  158 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCH
Confidence            998642    256678999999999999999999986 8999999999863                  13345567889


Q ss_pred             hhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       152 y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |+.+|.++|.+++.    .+++++++||+.+|||+......+...+..  .+..+.+++++.+. ++|+|++|+|++++.
T Consensus       159 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~-r~~i~v~D~a~a~~~  237 (346)
T d1oc2a_         159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV-RDWIHTNDHSTGVWA  237 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCE-EECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcc-ccccchhhHHHHHHH
Confidence            99999999998875    389999999999999976544444444432  66678888999888 899999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++.++.. +..|++++++..++.++++.+.+.++.+...
T Consensus       238 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  275 (346)
T d1oc2a_         238 ILTKGRM-GETYLIGADGEKNNKEVLELILEKMGQPKDA  275 (346)
T ss_dssp             HHHHCCT-TCEEEECCSCEEEHHHHHHHHHHHTTCCTTC
T ss_pred             HHhhccc-CccccccccccccchHHHHHHHHHhCCCCcc
Confidence            9886554 6699999999999999999999999987543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.9e-37  Score=268.40  Aligned_cols=247  Identities=15%  Similarity=0.076  Sum_probs=204.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---ch---hcCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LR---LCGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      +++|+|||||||||||++|+++|+++|++|++++|........   .+   .....++++++.+|+.|...+.....+++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            4578999999999999999999999999999998754332211   11   11122568999999999999999999999


Q ss_pred             EEEEccccC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHH
Q psy4233          90 VVINLIGRE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        90 ~vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~  159 (303)
                      .|+|+++..    ....+...+++|+.++.+|+++|++.+++++||+||..+|+.      .|+.|..|.+.|+.+|..+
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            999998753    235667789999999999999999999999999999999986      3566788999999999999


Q ss_pred             HHHHHhh----CCCEEEEeecceeeCCCc----hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         160 EKEVLRE----FPEATIFRPSDMYGSGDK----FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       160 e~~~~~~----~~~~~ilrp~~~~G~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      |++++.+    +++++++||+.+|||+..    ....+..++..  .++.+.++++|.+. ++|+|++|+|.++..++..
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~-r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS-RDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE-ECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE-EEEEEEeccchhhhhhhhc
Confidence            9988764    799999999999998643    22233344333  56778999999998 8999999999999998876


Q ss_pred             CC-CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         230 PD-AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       230 ~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +. ..+++||+++++.+|+.|+++.+.+.++.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~  287 (341)
T d1sb8a_         253 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV  287 (341)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTC
T ss_pred             cccccceeeeecccccchHHHHHHHHHHHhccccc
Confidence            43 46779999999999999999999999986643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.9e-35  Score=254.82  Aligned_cols=242  Identities=13%  Similarity=0.009  Sum_probs=195.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a   95 (303)
                      ++|||||||||||++|+++|+++||+|++++|...... ..+......++++++.+|+.|.+.+...+..  .++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            58999999999999999999999999999999754322 2233333346799999999999999998876  67888888


Q ss_pred             ccC----ccccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHH
Q psy4233          96 GRE----FATKNFTIADANVEIPARLARLSKEMGV-EKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVL  164 (303)
Q Consensus        96 ~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~  164 (303)
                      +..    ....+...++.|+.++.+++++|++.++ ++++++||..+|+.      +|+.|..|.++|+.+|.++|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            753    2245567899999999999999999885 47888888888765      366777899999999999999987


Q ss_pred             h----hCCCEEEEeecceeeCCCch---hhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         165 R----EFPEATIFRPSDMYGSGDKF---LRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       165 ~----~~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      .    .+++++++||+++|||....   ...+...+.+   ..+....+|+|.+. ++|+|++|+|+++..+++++.  +
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~-r~~i~v~D~~~~~~~~~~~~~--~  237 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK-RDWGFAGDYVEAMWLMLQQDK--A  237 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE-EECEEHHHHHHHHHHHHHSSS--C
T ss_pred             HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeE-EccEEeHHHHHHHHHHHhcCC--c
Confidence            6    37999999999999996432   2223333322   23344557888888 899999999999999998754  4


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ..||+++++..|+.++++.+.+.+|.+.+
T Consensus       238 ~~~ni~~~~~~s~~~~~~~~~~~~~~~~~  266 (321)
T d1rpna_         238 DDYVVATGVTTTVRDMCQIAFEHVGLDYR  266 (321)
T ss_dssp             CCEEECCSCEEEHHHHHHHHHHTTTCCGG
T ss_pred             CCceecccccceehhhhHHHHHHhCCCcc
Confidence            58999999999999999999999998754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-35  Score=259.60  Aligned_cols=239  Identities=15%  Similarity=0.119  Sum_probs=190.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~a~   96 (303)
                      |||||||||||||++|+++|+++| ++|+++++.........    ..++++++++|+++.+.+.+ +++++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----cCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            699999999999999999999999 58999988644322221    23679999999988766555 6677999999999


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC-------------CCCCCCCchhHHHHHH
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT-------------YYISGGSQFYRTKYQG  159 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-------------~~~~~~~~y~~~K~~~  159 (303)
                      ....    ..+...++.|+.++.++++++.+.++ ++++.||..+|+....             .+..|.+.|+.+|..+
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~  155 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccch
Confidence            6432    34557899999999999999999987 6678899888765221             1223456799999999


Q ss_pred             HHHHHhh----CCCEEEEeecceeeCCCc--------hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         160 EKEVLRE----FPEATIFRPSDMYGSGDK--------FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       160 e~~~~~~----~~~~~ilrp~~~~G~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |++++.+    +++++++|++.+|||...        ....+..++.+  .++.+.++++|.+. ++|+|++|+|+++..
T Consensus       156 E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-r~~i~v~D~~~a~~~  234 (342)
T d2blla1         156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK-RCFTDIRDGIEALYR  234 (342)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE-EECEEHHHHHHHHHH
T ss_pred             hhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCee-eeecccccccceeee
Confidence            9998764    899999999999998532        12234444443  57788889999998 899999999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcc-cCHHHHHHHHHHHhcCCCC
Q psy4233         226 ACKDP--DAAGKIYQAVGPKR-YLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~-~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++  ...|++||+++++. +|+.|+++.+++.+|....
T Consensus       235 ~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~  275 (342)
T d2blla1         235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (342)
T ss_dssp             HHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             ehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcc
Confidence            99874  34688999987755 8999999999999997755

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.2e-35  Score=257.40  Aligned_cols=276  Identities=16%  Similarity=0.089  Sum_probs=200.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      |.|||||||||||++|+++|+++|++|+++++...+..+...  ......+++++++|+.|.+.+..++.  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            569999999999999999999999999999875443222111  00112569999999999999999887  59999999


Q ss_pred             cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC----------CCCCCCCCCCchhHHHHHHH
Q psy4233          95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN----------PPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~----------~~~~~~~~~~~y~~~K~~~e  160 (303)
                      |+...    ...+..+..+|+.++.+++++|++.+++++|++||..+|+.          .++.+..|.++|+.+|.++|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            98642    23556788999999999999999999999999999999974          24556678899999999999


Q ss_pred             HHHHhh------CCCEEEEeecceeeCCCc----------hhhHHHHHHHh---hhcceeeecCCC------ceeeCcee
Q psy4233         161 KEVLRE------FPEATIFRPSDMYGSGDK----------FLRYYGHMWRH---VFRKLAVYKKGE------ETIKQPVY  215 (303)
Q Consensus       161 ~~~~~~------~~~~~ilrp~~~~G~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~i~  215 (303)
                      ++++++      +++++++||+.+||+...          ....+..+...   ....+.++|++.      .. +++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~-~d~~~  240 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI-RDYIH  240 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE-ECEEE
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee-eeeee
Confidence            988763      589999999999986421          11223222222   344555666543      34 78899


Q ss_pred             HHHHHHHHHHHhcC------CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccc-cCCCCChhhHHHHhhcc
Q psy4233         216 VGDVAAAIVAACKD------PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRY-DLRYDPVMPLKLFINGL  287 (303)
Q Consensus       216 ~~Dva~~~~~~~~~------~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~-~~~~~p~~~~~~~l~~~  287 (303)
                      +.|.+.+++.+++.      ....+++||+++++++|+.|+++.+.+.+|.+..+ +...+. ..+  -.......+.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~d~sk~~~~  318 (347)
T d1z45a2         241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVL--NLTAKPDRAKRE  318 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CC--CCCBCCHHHHHH
T ss_pred             eecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCC--EeeECHHHHHHH
Confidence            99999998887753      23346799999999999999999999999988775 222221 111  111122344555


Q ss_pred             CCCCCCCCCCcc
Q psy4233         288 FPGYPMGHLTPE  299 (303)
Q Consensus       288 ~~~~~~~~~~~~  299 (303)
                      ++|.|.  .+.+
T Consensus       319 lGw~p~--~~le  328 (347)
T d1z45a2         319 LKWQTE--LQVE  328 (347)
T ss_dssp             TCCCCC--CCHH
T ss_pred             HCCCCC--CCHH
Confidence            677666  5554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=254.92  Aligned_cols=246  Identities=18%  Similarity=0.162  Sum_probs=189.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc------cccch--hcCCCCceEEEecCCCCHHHHHHHhcc--
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD------VRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIKY--   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~------~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   87 (303)
                      .+||||||||||||++|+++|+++|++|++++|.....      .....  ......+++++++|++|.+.+.+++.+  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            47999999999999999999999999999997532211      11111  011225699999999999999998876  


Q ss_pred             cCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC-------CCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP-------TYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-------~~~~~~~~~y~~~K  156 (303)
                      +|+++|+|+....    ..+....+.|+.++.++++++++.++++++|+||..+++...       .....+.++|+.+|
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence            6689999986432    356778999999999999999999999999999999987632       12235677899999


Q ss_pred             HHHHHHHHhh-----CCCEEEEeecceeeCCCc-------------hhhHHHHHHHhhhcceeeec------CCCceeeC
Q psy4233         157 YQGEKEVLRE-----FPEATIFRPSDMYGSGDK-------------FLRYYGHMWRHVFRKLAVYK------KGEETIKQ  212 (303)
Q Consensus       157 ~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~-------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  212 (303)
                      ..+|+.+.++     +++++++||+.+|||...             ....+..........+.+++      +|.+. ++
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~-Rd  240 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RD  240 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE-EC
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee-Ee
Confidence            9999988753     789999999999998532             12222222221344555544      35566 89


Q ss_pred             ceeHHHHHHHHHHHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         213 PVYVGDVAAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      |+|++|+|.++..++..  ....+++||+++++.+++.|+++.+++.+|.+.++
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~  294 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPY  294 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCe
Confidence            99999999999887543  33456799999999999999999999999988764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-34  Score=256.19  Aligned_cols=242  Identities=17%  Similarity=0.139  Sum_probs=184.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec---CC----------C---cccccchh--cCCCCceEEEecCCCCHH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GN----------F---YDVRDLRL--CGDLGQVLFQPYHPRNDD   79 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R---~~----------~---~~~~~~~~--~~~~~~~~~~~~Dl~d~~   79 (303)
                      +|||||||||||||++|+++|+++||+|++++.   +.          .   .....+..  ....++++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            589999999999999999999999999999851   10          0   00000000  011256899999999999


Q ss_pred             HHHHHhcc--cCEEEEccccCc-------cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCCCC-------
Q psy4233          80 EIRKAIKY--SNVVINLIGREF-------ATKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPNPP-------  142 (303)
Q Consensus        80 ~~~~~~~~--~D~vi~~a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~-------  142 (303)
                      .+.+++++  +|+|||+|+...       ...+...++.|+.++.+++++|++.+++ +++++||..+|+...       
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            99999986  699999998532       2234467899999999999999998865 677777777765321       


Q ss_pred             ------------CCCCCCCCchhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-----------------hHH
Q psy4233         143 ------------TYYISGGSQFYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-----------------RYY  189 (303)
Q Consensus       143 ------------~~~~~~~~~y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-----------------~~~  189 (303)
                                  +.|..|.++|+.+|..+|.++..    .+++++++||+.+|||+....                 ..+
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence                        12456778999999999998865    489999999999999865321                 123


Q ss_pred             HHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE-eCCcccCHHHHHHHHHHHhcC
Q psy4233         190 GHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA-VGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       190 ~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i-~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ..++.+  .++.++++|++.+. ++|+|++|+++++..++++....+..+.+ .+++.+|+.|+++.+.+..+.
T Consensus       241 ~~~~~~~~~~~~~~i~g~~~~~-rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~  313 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKGGQT-RGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSK  313 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCE-EEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred             hhhhHHhhcCCeeEEeeecccc-cccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHh
Confidence            333333  67788999999998 89999999999999999877665643333 456779999999999888653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-34  Score=249.93  Aligned_cols=242  Identities=14%  Similarity=-0.021  Sum_probs=192.4

Q ss_pred             cEE-EEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc----cccch---hcCCCCceEEEecCCCCHHHHHHHhcc--c
Q psy4233          19 VVA-TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD----VRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIKY--S   88 (303)
Q Consensus        19 ~~v-lVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   88 (303)
                      +|| ||||||||||++|+++|+++||+|++++|.....    .+.+.   ......+++++.+|++|.+.+..++.+  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            578 9999999999999999999999999999965421    11110   111124689999999999999999876  7


Q ss_pred             CEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCC------CCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPN------PPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~  155 (303)
                      ++++|+++....    ..+..+.++|+.++.+++++++++++   +++||+||..+|+.      .|+.|..|.++|+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            899999886432    35556789999999999999999875   38999999999986      366677889999999


Q ss_pred             HHHHHHHHHhh----CCCEEEEeecceeeCCCchh---hHHHH-HHHh--hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE----FPEATIFRPSDMYGSGDKFL---RYYGH-MWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       156 K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~---~~~~~-~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      |.++|+++..+    +++++++||+.+|||+....   ..+.. +...  .......+|++.+. ++|+|++|+++++..
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~-r~~i~v~D~~~a~~~  239 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK-RDWGHAKDYVEAMWL  239 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE-ECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcce-eeeeEecHHHHHHHH
Confidence            99999998764    89999999999999964321   22222 2221  34557778888888 899999999999999


Q ss_pred             HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      ++++..  .+.|++..+...++.+..+.+...+++...
T Consensus       240 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (347)
T d1t2aa_         240 MLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIV  275 (347)
T ss_dssp             HHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             HhhcCC--Cccceeccccccccchhhhhhhhhhcceee
Confidence            998754  347999999999999999999999998643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=3e-34  Score=254.46  Aligned_cols=246  Identities=16%  Similarity=0.106  Sum_probs=189.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCcc-----ccc-------ch------hcCCCCceEEEecCCCCH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYD-----VRD-------LR------LCGDLGQVLFQPYHPRND   78 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~-----~~~-------~~------~~~~~~~~~~~~~Dl~d~   78 (303)
                      .|||||||||||||++|+++|++ .|++|+++++-....     .+.       +.      .......++++.+|+.|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999996 689999987411110     000       00      001124588999999999


Q ss_pred             HHHHHHhc---ccCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-----------
Q psy4233          79 DEIRKAIK---YSNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-----------  140 (303)
Q Consensus        79 ~~~~~~~~---~~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-----------  140 (303)
                      +.++++++   ++|+|||+|+....    ..+....+.|+.++.++++++++.++++++++||..+++.           
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99999886   47999999996433    3455688999999999999999999999999999998764           


Q ss_pred             --CCCCCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchh---------h----HHHHHHHh------
Q psy4233         141 --PPTYYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFL---------R----YYGHMWRH------  195 (303)
Q Consensus       141 --~~~~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~---------~----~~~~~~~~------  195 (303)
                        .++.+..|.++|+.+|...|++++.+    +++++++||+.+|||++...         .    .+......      
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence              23456678899999999999999774    89999999999999875421         1    11222211      


Q ss_pred             --------hhcceeeec------CCCceeeCceeHHHHHHHHHHHhcC--------CCCCCcEEEEeCCcccCHHHHHHH
Q psy4233         196 --------VFRKLAVYK------KGEETIKQPVYVGDVAAAIVAACKD--------PDAAGKIYQAVGPKRYLLSELLDW  253 (303)
Q Consensus       196 --------~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~~~--------~~~~g~~~~i~~~~~~s~~e~~~~  253 (303)
                              ..+.++++|      +|.+. ++|+|++|+|++++.+++.        ....+++||+++++++|+.|+++.
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~-Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~  320 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCV-RDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV  320 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCE-ECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeE-EeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHH
Confidence                    233445554      36667 8999999999999998863        122457999999999999999999


Q ss_pred             HHHHhcCCCCC
Q psy4233         254 FHVVMKKGEPD  264 (303)
Q Consensus       254 i~~~~g~~~~~  264 (303)
                      +.+.+|.+.++
T Consensus       321 i~~~~~~~~~~  331 (383)
T d1gy8a_         321 ARKTTGHPIPV  331 (383)
T ss_dssp             HHHHHCCCCCE
T ss_pred             HHHHhCCCCce
Confidence            99999988775

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-33  Score=226.94  Aligned_cols=203  Identities=12%  Similarity=0.054  Sum_probs=165.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |.|+||+||||||+||++++++|+++||+|++++|++.+....     ..++++++.+|++|.+++.++++++|+|||++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhcCCCEEEEEe
Confidence            5688999999999999999999999999999999985543222     12569999999999999999999999999999


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEee
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP  175 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp  175 (303)
                      |......   ..+.+..++.++++++++++++|+|++||.+++.+.+..+ .....|...|..+|+++++.+++|+++||
T Consensus        76 g~~~~~~---~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-~~~~~~~~~~~~~e~~l~~~~~~~tiirp  151 (205)
T d1hdoa_          76 GTRNDLS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-PRLQAVTDDHIRMHKVLRESGLKYVAVMP  151 (205)
T ss_dssp             CCTTCCS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-GGGHHHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             ccCCchh---hhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-ccccccchHHHHHHHHHHhcCCceEEEec
Confidence            8754333   3356778899999999999999999999999988655443 22346888999999999999999999999


Q ss_pred             cceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         176 SDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       176 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                      +.+++....             ....+..++... ..+|+++|+|++++.+++++...|+.+.+..
T Consensus       152 ~~~~~~~~~-------------~~~~~~~~~~~~-~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         152 PHIGDQPLT-------------GAYTVTLDGRGP-SRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             SEEECCCCC-------------SCCEEESSSCSS-CSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ceecCCCCc-------------ccEEEeeCCCCC-CCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            999864221             122333344444 6789999999999999998887888887754

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.7e-33  Score=239.69  Aligned_cols=227  Identities=14%  Similarity=0.096  Sum_probs=181.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a   95 (303)
                      .+||||||||||||++|+++|+++|+.|+++++..                   +.|+.|.+.+..++++  +|+|+|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            57999999999999999999999999998875542                   2578899999988865  89999999


Q ss_pred             ccCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC-----------CCCCCCchhHHHHHH
Q psy4233          96 GREF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY-----------YISGGSQFYRTKYQG  159 (303)
Q Consensus        96 ~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-----------~~~~~~~y~~~K~~~  159 (303)
                      +...     ...+..+++.|+.++.+++++|+++++++|||+||.++|+.....           +..+.++|+.+|.++
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            7532     234556788999999999999999999999999999999864322           112235699999999


Q ss_pred             HHHHHhh----CCCEEEEeecceeeCCCchh-------hHHH--HHHH--hhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         160 EKEVLRE----FPEATIFRPSDMYGSGDKFL-------RYYG--HMWR--HVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       160 e~~~~~~----~~~~~ilrp~~~~G~~~~~~-------~~~~--~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |++++.+    +++++++||+.+|||++...       ..+.  ....  .....+...+++.+. ++|+|++|++.++.
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM-REFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE-ECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE-EEEEEeehhHHHHH
Confidence            9998753    89999999999999965311       1111  1111  156778888888887 89999999999999


Q ss_pred             HHhcCC--------CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         225 AACKDP--------DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       225 ~~~~~~--------~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      .++.+.        ......++++.+...++.++++.+.+.+|.+..+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i  269 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRV  269 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEE
T ss_pred             HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcce
Confidence            988643        2235589999999999999999999999988664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-32  Score=239.90  Aligned_cols=243  Identities=13%  Similarity=0.017  Sum_probs=189.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc----cccch---hcCCCCceEEEecCCCCHHHHHHHhcc--c
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD----VRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIKY--S   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~----~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   88 (303)
                      .+++||||||||||++|+++|+++||+|++++|..+..    ...+.   .......++++.+|+.+.+.+...++.  +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            36899999999999999999999999999999964321    11111   111224588999999999999998865  7


Q ss_pred             CEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcC-----CceEEEEecCccCCC-----CCCCCCCCCCchhH
Q psy4233          89 NVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMG-----VEKFIHISALNADPN-----PPTYYISGGSQFYR  154 (303)
Q Consensus        89 D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~Ss~~~~~~-----~~~~~~~~~~~y~~  154 (303)
                      |+|||+|+....    ..+....+.|+.++.+++++++...     ..++++.||..+++.     +|+.|..|.+.|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            999999987432    4667888999999999999997642     347888888877655     46778889999999


Q ss_pred             HHHHHHHHHHh----hCCCEEEEeecceeeCCCch---hhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         155 TKYQGEKEVLR----EFPEATIFRPSDMYGSGDKF---LRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       155 ~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      +|..+|+++..    ++++++++||+.+|||....   ...+......   ......+.|++.+. ++|+|++|+|+++.
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~-rd~~~v~D~a~~~~  239 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS-RDWGFAGDYVEAMW  239 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE-EECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcc-ccceeeehHHHHHH
Confidence            99999998766    48999999999999996442   2222222221   34456667788888 89999999999999


Q ss_pred             HHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233         225 AACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       225 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      .+++++..  ..+++..+...+..++++.+.+.+|....
T Consensus       240 ~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  276 (339)
T d1n7ha_         240 LMLQQEKP--DDYVVATEEGHTVEEFLDVSFGYLGLNWK  276 (339)
T ss_dssp             HHHTSSSC--CEEEECCSCEEEHHHHHHHHHHHTTCCGG
T ss_pred             HHHhcCCC--CccccccccccccchhhhhhhhhhhcccC
Confidence            99997653  36778888999999999999999997643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=3.6e-33  Score=243.75  Aligned_cols=239  Identities=12%  Similarity=-0.001  Sum_probs=179.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .+++|||||||||||++|+++|+++|++|++++|+..+ ...+.    ..........+.+|+.|.+.+.+++.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK-LANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchh-HHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            36899999999999999999999999999999997532 22211    11111335568899999999999999999999


Q ss_pred             EccccC-ccccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC--------------------------CCCC
Q psy4233          93 NLIGRE-FATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN--------------------------PPTY  144 (303)
Q Consensus        93 ~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~--------------------------~~~~  144 (303)
                      |+++.. ....+..+++.|+.++.+++++|.+. +++++||+||..+...                          .+..
T Consensus        89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~  168 (342)
T d1y1pa1          89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD  168 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred             hhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccC
Confidence            999874 34455678889999999999999886 5899999999865322                          1223


Q ss_pred             CCCCCCchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCc---hhhHHHHHHHh--hhcceeeecCCCceeeCc
Q psy4233         145 YISGGSQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDK---FLRYYGHMWRH--VFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       145 ~~~~~~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  213 (303)
                      +..|.++|+.+|..+|.+++.+      ++.++++||+++|||...   ....+..++..  .+...+. ..+.+. ++|
T Consensus       169 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~-~~~  246 (342)
T d1y1pa1         169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPP-QYY  246 (342)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCCS-EEE
T ss_pred             CCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCccc-eee
Confidence            3345567999999999876654      367888999999998532   11122222222  3333333 334444 689


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233         214 VYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK  259 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  259 (303)
                      +|++|+|++++.+++++...+ .|++++++.+|+.|+++.|.+.+.
T Consensus       247 v~v~Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         247 VSAVDIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             EEHHHHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCT
T ss_pred             eeHHHHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcC
Confidence            999999999999998877656 577889999999999999999974

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=8.2e-33  Score=240.52  Aligned_cols=244  Identities=17%  Similarity=0.165  Sum_probs=188.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      ||||||||||||++|+++|+++|++|+++++-.. ...+.+......++++++.+|+.|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            8999999999999999999999999999875322 2222222333346799999999999999999987  699999998


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC-C----------------------CCCCCCCC
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN-P----------------------PTYYISGG  149 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-~----------------------~~~~~~~~  149 (303)
                      ....    ..+....++|+.++.+|++++++.++++++++||.+++.. .                      +..+..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            7433    3567889999999999999999999877777777655322 1                      12334567


Q ss_pred             CchhHHHHHHHHHHHh----hCCCEEEEeecceeeCCC---chhhHHHHH----HHh---hhcceeeecCCCceeeCcee
Q psy4233         150 SQFYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGD---KFLRYYGHM----WRH---VFRKLAVYKKGEETIKQPVY  215 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~---~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~i~  215 (303)
                      +.|+.+|...|.++..    .+....++|+..+|++..   .....+..+    +..   .++.+.++|+|.+. ++|+|
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-r~~~~  240 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV-RDVLH  240 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE-EECEE
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCcee-Eeeec
Confidence            7899999999988765    478999999999997532   211222222    211   35678889999888 89999


Q ss_pred             HHHHHHHHHHHhcCC-CCCCcEEEEeCC--cccCHHHHHHHHHHHhcCCCCC
Q psy4233         216 VGDVAAAIVAACKDP-DAAGKIYQAVGP--KRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       216 ~~Dva~~~~~~~~~~-~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      ++|++++++.++++. ...+++|++..+  ..+++.|+++.+.+.+|.+.++
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~  292 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF  292 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCE
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCcee
Confidence            999999999999764 346789999654  5689999999999999987664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=3e-32  Score=231.11  Aligned_cols=219  Identities=18%  Similarity=0.186  Sum_probs=183.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |||||||||||||++|+++|.++||+|++++|+.                    +|+.|.+++.+++++  +|+|||+++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~~~d~vih~a~   61 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEKKPNVVINCAA   61 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHcCCCEEEeecc
Confidence            6899999999999999999999999999998862                    478999999999875  799999998


Q ss_pred             cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ....    ..+......|......+.+.+...+. +++++||..+++..      +..+..+...|+.+|...|+++++.
T Consensus        62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            6432    34456778889889889888888775 88888888887663      4445677888999999999999999


Q ss_pred             CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccC
Q psy4233         167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL  246 (303)
Q Consensus       167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  246 (303)
                      +.+++++||+++|||+.++...+..... ..+.+.+.+  .+. ++++|++|+++++..++++.. .| +||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~~~i~v~D~~~~~~~~~~~~~-~g-~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGNNFVKTMINLGK-THDELKVVH--DQV-GTPTSTVDLARVVLKVIDEKN-YG-TFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSSSCHHHHHHHHHH-HCSEEEEES--SCE-ECCEEHHHHHHHHHHHHHHTC-CE-EEECCCBSCEE
T ss_pred             CCCccccceeEEeCCCcccccchhhhhc-cCCceeecC--Cce-eccchhhhhhhhhhhhhhhcc-cC-ceeEeCCCccc
Confidence            9999999999999998876655554443 445555554  455 899999999999999998754 24 99999999999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q psy4233         247 LSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       247 ~~e~~~~i~~~~g~~~~~  264 (303)
                      +.|+++.+++.+|++..+
T Consensus       215 ~~e~~~~i~~~~g~~~~i  232 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDVKV  232 (281)
T ss_dssp             HHHHHHHHHHHHCCCCEE
T ss_pred             hHHHHHHHHHHhCCCceE
Confidence            999999999999998764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=100.00  E-value=7.7e-33  Score=237.83  Aligned_cols=239  Identities=16%  Similarity=0.134  Sum_probs=192.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch--hcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR--LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ++||||||||||||++|+++|+++||+|++++|+....... ..  ......+++++.+|+.|.+.+...+.++++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            56899999999999999999999999999999975433211 11  1111256999999999999999999999999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEe
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFR  174 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilr  174 (303)
                      ++....       ..|.....++++++++.+..++++.||.+++......+..+...|...|..++++.+..+++++++|
T Consensus        83 ~~~~~~-------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r  155 (312)
T d1qyda_          83 LAGGVL-------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVS  155 (312)
T ss_dssp             CCCSSS-------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred             hhhccc-------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEec
Confidence            876432       3466777889999999988899999999888877777777888899999999999999999999999


Q ss_pred             ecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE-EEEeCCcccCHHHHHHH
Q psy4233         175 PSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI-YQAVGPKRYLLSELLDW  253 (303)
Q Consensus       175 p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~-~~i~~~~~~s~~e~~~~  253 (303)
                      |+.+||+................+.+.+++++.+. ++|||++|+|++++.++.++...++. |++.+++.+|+.|+++.
T Consensus       156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~  234 (312)
T d1qyda_         156 SNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVK-GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI  234 (312)
T ss_dssp             CCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSE-EEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHH
T ss_pred             cceeecCCccchhhHHHHhhhcccccccccccccc-cceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHH
Confidence            99999964432211111111145677788888887 89999999999999999887666665 55556678999999999


Q ss_pred             HHHHhcCCCCC
Q psy4233         254 FHVVMKKGEPD  264 (303)
Q Consensus       254 i~~~~g~~~~~  264 (303)
                      +++.+|++...
T Consensus       235 ~~~~~g~~~~~  245 (312)
T d1qyda_         235 WERLSEQNLDK  245 (312)
T ss_dssp             HHHHHTCCCEE
T ss_pred             HHHHHCCCCeE
Confidence            99999998763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-32  Score=227.14  Aligned_cols=208  Identities=17%  Similarity=0.142  Sum_probs=164.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |++++|||||||||||++|+++|+++|  ++|++++|++.......     ...++...+|+.+.+++..+++++|+|||
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeecccccccccccccccccccc
Confidence            567899999999999999999999999  48999999865433221     24588899999999999999999999999


Q ss_pred             ccccCc-cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCC-EE
Q psy4233          94 LIGREF-ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE-AT  171 (303)
Q Consensus        94 ~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~-~~  171 (303)
                      ++|... ......+.++|+.++.+++++|++.++++||++||.+++.       .+.++|+.+|.++|+++++.+.+ ++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-------~~~~~Y~~~K~~~E~~l~~~~~~~~~  159 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------SSNFLYLQVKGEVEAKVEELKFDRYS  159 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------TCSSHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCcccccc-------CccchhHHHHHHhhhccccccccceE
Confidence            998643 2345578899999999999999999999999999999987       45678999999999999999875 99


Q ss_pred             EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233         172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG  241 (303)
Q Consensus       172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  241 (303)
                      |+||+.+||++.... ....+..   ...+..+.+... ..+|+++|+|++++.++.++.. ++.+.+.+
T Consensus       160 IlRP~~i~G~~~~~~-~~~~~~~---~~~~~~~~~~~~-~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         160 VFRPGVLLCDRQESR-PGEWLVR---KFFGSLPDSWAS-GHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             EEECCEEECTTGGGS-HHHHHHH---HHHCSCCTTGGG-GTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             EecCceeecCCCcCc-HHHHHHH---HHhhccCCcccC-CCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            999999999876532 1112211   112222222333 4679999999999999886654 44666653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.98  E-value=1.9e-31  Score=233.82  Aligned_cols=247  Identities=12%  Similarity=0.082  Sum_probs=189.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~   94 (303)
                      ++|||||||||||||++|+++|+++|++|++++|+..+....+......++++++.+|++|++.+.+++++  +|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            57899999999999999999999999999999998766555444333446799999999999999998875  7999999


Q ss_pred             cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCC-------CCCCCCCCCCchhHHHHHHHHH
Q psy4233          95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPN-------PPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~-------~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      |+....    ..+....++|+.++.++++++++.+.+ .+++.|+...+..       .++.+..|.++|+.+|...|..
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~  166 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  166 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence            986432    466788999999999999999997754 5555555544433       2445567789999999999987


Q ss_pred             HHh-------------hCCCEEEEeecceeeCCCchh-hHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         163 VLR-------------EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       163 ~~~-------------~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +..             .+..++++||+.+|||++... ..+..+++. ..+.....+.+.+. ++++|++|+|.+++.++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~v~D~~~a~~~~~  245 (356)
T d1rkxa_         167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAI-RPWQHVLEPLSGYLLLA  245 (356)
T ss_dssp             HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCE-ECCEETHHHHHHHHHHH
T ss_pred             hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccc-ccccccccccchhhhhh
Confidence            764             257899999999999976432 233333333 44455566777777 89999999999999888


Q ss_pred             cCCCC----CCcEEEE--eCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233         228 KDPDA----AGKIYQA--VGPKRYLLSELLDWFHVVMKKGEPD  264 (303)
Q Consensus       228 ~~~~~----~g~~~~i--~~~~~~s~~e~~~~i~~~~g~~~~~  264 (303)
                      .+...    .+...+.  ..+..+++.++++.+.+.++....+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  288 (356)
T d1rkxa_         246 QKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW  288 (356)
T ss_dssp             HHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred             hhhcccccccccccccccccccccccchhhhhhHHHhCCCccE
Confidence            75322    1223333  3456689999999999999987664

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.97  E-value=5.4e-31  Score=225.14  Aligned_cols=232  Identities=17%  Similarity=0.155  Sum_probs=181.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++||||||||||||++++++|+++|++|++++|++.......+    ......+++++.+|+.+.+.+...+++++.++|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            6899999999999999999999999999999997654322111    001124689999999999999999999999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEE
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIF  173 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~il  173 (303)
                      +++..           +..++.++++++..++++++++.|+.+..... ..+..+...+...+...+.++++.+++++++
T Consensus        83 ~~~~~-----------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  150 (307)
T d1qyca_          83 TVGSL-----------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYV  150 (307)
T ss_dssp             CCCGG-----------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEE
T ss_pred             ccccc-----------ccchhhHHHHHHHHhccccceeeecccccccc-ccccccccccccccccccchhhccCCCceec
Confidence            98753           34456688999999998899988886665432 2222334567778888999999999999999


Q ss_pred             eecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE-EEEeCCcccCHHHHHH
Q psy4233         174 RPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI-YQAVGPKRYLLSELLD  252 (303)
Q Consensus       174 rp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~-~~i~~~~~~s~~e~~~  252 (303)
                      ||+++||+............. ......+++.+.+. ++|+|++|+|++++.+++++...++. |++++++.+|+.|+++
T Consensus       151 r~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~  228 (307)
T d1qyca_         151 SSNCFAGYFLRSLAQAGLTAP-PRDKVVILGDGNAR-VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVA  228 (307)
T ss_dssp             ECCEEHHHHTTTTTCTTCSSC-CSSEEEEETTSCCE-EEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             ccceecCCCccchhhhhhhhh-hcccceeeeccccc-ccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHH
Confidence            999999975443222111111 45567777888887 89999999999999999887666655 5556778899999999


Q ss_pred             HHHHHhcCCCC
Q psy4233         253 WFHVVMKKGEP  263 (303)
Q Consensus       253 ~i~~~~g~~~~  263 (303)
                      .+++++|++..
T Consensus       229 ~~~~~~G~~~~  239 (307)
T d1qyca_         229 LWEKKIDKTLE  239 (307)
T ss_dssp             HHHHHTTSCCE
T ss_pred             HHHHHHCCCCc
Confidence            99999999866

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=4.1e-30  Score=212.94  Aligned_cols=227  Identities=15%  Similarity=0.064  Sum_probs=175.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe--EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQ--IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~--V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +|++|||||||||||++++++|+++|++  |++++|++.+....      ..+++++.+|+.+.+++.++++++|+|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------GGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc------cCCcEEEEeeeccccccccccccceeeEEE
Confidence            4789999999999999999999999965  66777865332211      246899999999999999999999999999


Q ss_pred             cccCcc-----------------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          95 IGREFA-----------------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        95 a~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      ++....                 ........+|+.++++++..+.....+++.+.|+...+....+........|...+.
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  155 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKR  155 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHH
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhh
Confidence            975221                 123456778899999999999999999999999988877554444455677888888


Q ss_pred             HHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEE
Q psy4233         158 QGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY  237 (303)
Q Consensus       158 ~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~  237 (303)
                      ..+.+....+++++++||+++|||.......+      .......   .... .++||++|+|++++.+++++...|++|
T Consensus       156 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~------~~~~~~~---~~~~-~~~i~~~Dva~a~~~~l~~~~~~g~~~  225 (252)
T d2q46a1         156 KAEQYLADSGTPYTIIRAGGLLDKEGGVRELL------VGKDDEL---LQTD-TKTVPRADVAEVCIQALLFEEAKNKAF  225 (252)
T ss_dssp             HHHHHHHHSSSCEEEEEECEEECSCTTSSCEE------EESTTGG---GGSS-CCEEEHHHHHHHHHHHTTCGGGTTEEE
T ss_pred             hhhhhhhcccccceeecceEEECCCcchhhhh------hccCccc---ccCC-CCeEEHHHHHHHHHHHhCCccccCcEE
Confidence            88888888999999999999999975532221      1111111   1222 578999999999999999888888999


Q ss_pred             EEeCCc---ccCHHHHHHHHHHHhc
Q psy4233         238 QAVGPK---RYLLSELLDWFHVVMK  259 (303)
Q Consensus       238 ~i~~~~---~~s~~e~~~~i~~~~g  259 (303)
                      |++++.   ..++.|+.+.+.+..+
T Consensus       226 ~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         226 DLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             EEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             EEeeCCCCCChhHHHHHHHHHHHHh
Confidence            998753   3567777777665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=8.1e-29  Score=201.50  Aligned_cols=194  Identities=18%  Similarity=0.225  Sum_probs=143.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-ccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-YSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~   93 (303)
                      +++||||||||||||++|+++|+++|+  +|++++|++....         +++   ..+..|..++...+. ++|+|||
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------~~~---~~~~~d~~~~~~~~~~~~d~vi~   68 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------PRL---DNPVGPLAELLPQLDGSIDTAFC   68 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------TTE---ECCBSCHHHHGGGCCSCCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------ccc---cccccchhhhhhccccchheeee
Confidence            368999999999999999999999996  7888888654322         122   334445555544443 4899999


Q ss_pred             ccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCC-CE
Q psy4233          94 LIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EA  170 (303)
Q Consensus        94 ~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~-~~  170 (303)
                      |+|..  .......+.+.|+.++.+++++|++.++++++++||.+++.       .+.+.|..+|..+|+.+++.+. ++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~-------~~~~~y~~~K~~~E~~l~~~~~~~~  141 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------KSSIFYNRVKGELEQALQEQGWPQL  141 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------TCSSHHHHHHHHHHHHHTTSCCSEE
T ss_pred             eeeeeccccccccccccchhhhhhhccccccccccccccccccccccc-------ccccchhHHHHHHhhhccccccccc
Confidence            99864  23445678899999999999999999999999999999987       4568999999999999999887 49


Q ss_pred             EEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         171 TIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       171 ~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      +|+||+.+|||...+....  .+  .....++.   ... +.+||++|+|++++.+++++.. | .+.+
T Consensus       142 ~I~Rp~~v~G~~~~~~~~~--~~--~~~~~~~~---~~~-~~~i~v~DvA~ai~~~~~~~~~-g-~~~~  200 (212)
T d2a35a1         142 TIARPSLLFGPREEFRLAE--IL--AAPIARIL---PGK-YHGIEACDLARALWRLALEEGK-G-VRFV  200 (212)
T ss_dssp             EEEECCSEESTTSCEEGGG--GT--TCCCC-------CH-HHHHHHHHHHHHHHHHHTCCCS-E-EEEE
T ss_pred             eeeCCcceeCCcccccHHH--HH--HHHHhhcc---CCC-CcEEEHHHHHHHHHHHHcCCCC-C-CEEE
Confidence            9999999999976532111  11  11111111   122 4579999999999999986543 4 4444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=7.2e-28  Score=205.28  Aligned_cols=221  Identities=19%  Similarity=0.190  Sum_probs=172.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~   96 (303)
                      |||||||||||||++|+++|.++|+.|.+ .++...                +.+|+.|.+.+.+++++  +|+|||+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence            78999999999999999999999875544 444221                25789999999999876  699999998


Q ss_pred             cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233          97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLRE  166 (303)
Q Consensus        97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~  166 (303)
                      ..    ....+...++.|+.++.+|++++++.++ +++++||..++..      .|..+..|.+.|+.+|..+|+++..+
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            63    2356677889999999999999999886 7888898888765      35556678899999999999999998


Q ss_pred             CCCEEEEeecceee-CCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC---CCCCCcEEEEeCC
Q psy4233         167 FPEATIFRPSDMYG-SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD---PDAAGKIYQAVGP  242 (303)
Q Consensus       167 ~~~~~ilrp~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~---~~~~g~~~~i~~~  242 (303)
                      .....++|++..++ ++......+...+. ....+...  +... .++++++|+++++..++..   ....+++||++++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~  218 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKGNNFAKTMLRLAK-ERQTLSVI--NDQY-GAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (298)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHH-HCSEEEEE--CSCE-ECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hcccccccccceeeccCCccchhhhhhhc-ccceeecc--ccee-ecccccchHHHHHHHHHhhhhccccccccccccCC
Confidence            88888888777765 44544444444433 33333333  3455 7899999999999887652   3334669999999


Q ss_pred             cccCHHHHHHHHHHHhcCC
Q psy4233         243 KRYLLSELLDWFHVVMKKG  261 (303)
Q Consensus       243 ~~~s~~e~~~~i~~~~g~~  261 (303)
                      +.+++.|+++.+.+..++.
T Consensus       219 ~~~~~~~~~~~i~~~~~~~  237 (298)
T d1n2sa_         219 GTTTWHDYAALVFDEARKA  237 (298)
T ss_dssp             SCEEHHHHHHHHHHHHHHH
T ss_pred             CceecHHHHHHHHhhhhcc
Confidence            9999999999998887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=8.6e-27  Score=199.24  Aligned_cols=229  Identities=15%  Similarity=0.098  Sum_probs=153.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH-HH-----hcccCEEEE
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR-KA-----IKYSNVVIN   93 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~-----~~~~D~vi~   93 (303)
                      |||||||||||++|+++|+++|+ +|+++++-.... .....      .+....|..+.+.+. ..     +..+++|+|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   74 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNL------VDLNIADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHH------HTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhcc------cccchhhhccchHHHHHHhhhhcccchhhhhh
Confidence            89999999999999999999994 799986433221 11111      111122222333322 22     234799999


Q ss_pred             ccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh
Q psy4233          94 LIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR  165 (303)
Q Consensus        94 ~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~  165 (303)
                      +|+..  .........+.|+.++.+++++++..++ ++++.||..++...      ++.+..+.+.|+.+|..+|.+++.
T Consensus        75 ~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             hcccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccchhhhhccc
Confidence            99753  3345556788889999999999999998 56666666665432      233456788999999999999887


Q ss_pred             h----CCCEEEEeecceeeCCCchhh----HHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233         166 E----FPEATIFRPSDMYGSGDKFLR----YYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG  234 (303)
Q Consensus       166 ~----~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  234 (303)
                      +    +++++++||+.+|||+.....    .+..+...  .++ .....|++... ++|+|++|++.++..+++++.  .
T Consensus       154 ~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-r~~~~v~d~~~~~~~~~~~~~--~  230 (307)
T d1eq2a_         154 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK-RDFVYVGDVADVNLWFLENGV--S  230 (307)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C-BCEEEHHHHHHHHHHHHHHCC--C
T ss_pred             cccccccccccccceeEeeccccccccccccccccccccccccceeeecCcccee-eeeeecccHHHHHHHHhhhcc--c
Confidence            4    799999999999999764322    22223322  222 33334566666 899999999999999998643  4


Q ss_pred             cEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233         235 KIYQAVGPKRYLLSELLDWFHVVMKK  260 (303)
Q Consensus       235 ~~~~i~~~~~~s~~e~~~~i~~~~g~  260 (303)
                      ..||+++++..|+.|+++.+.+..++
T Consensus       231 ~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         231 GIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             EEEEESCSCCBCHHHHHHHC------
T ss_pred             cccccccccchhHHHHHHHHHHhcCC
Confidence            59999999999999999999887764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.94  E-value=3.8e-27  Score=205.88  Aligned_cols=233  Identities=11%  Similarity=-0.014  Sum_probs=171.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhcccCEEEEcc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIKYSNVVINLI   95 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~D~vi~~a   95 (303)
                      +.|+|+|||||||||++|+++|+++||+|++++|+..+....  .....++++++++|+.|. +.++.++.++|++++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            367999999999999999999999999999999976543221  112235799999999885 45778889999998876


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEee
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP  175 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp  175 (303)
                      ....        ..++..+.+++++|++++++++++.||........   ..+..+|..+|...++++.+.+.+++++||
T Consensus        80 ~~~~--------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~---~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~  148 (350)
T d1xgka_          80 TSQA--------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG---PWPAVPMWAPKFTVENYVRQLGLPSTFVYA  148 (350)
T ss_dssp             CSTT--------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS---SCCCCTTTHHHHHHHHHHHTSSSCEEEEEE
T ss_pred             cccc--------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCC---cccchhhhhhHHHHHHHHHhhccCceeeee
Confidence            5421        23566778999999999988888888876544322   234567889999999999999999999999


Q ss_pred             cceeeCCCchhhHHH--HHHHhhhcceeeecCCCceeeCceeH-HHHHHHHHHHhcCC--CCCCcEEEEeCCcccCHHHH
Q psy4233         176 SDMYGSGDKFLRYYG--HMWRHVFRKLAVYKKGEETIKQPVYV-GDVAAAIVAACKDP--DAAGKIYQAVGPKRYLLSEL  250 (303)
Q Consensus       176 ~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~-~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e~  250 (303)
                      +.++++.........  ...............+... +.++++ +|++++++.++...  ...|+.|++++ +.+|+.|+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~ei  226 (350)
T d1xgka_         149 GIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIP-LPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQV  226 (350)
T ss_dssp             CEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSC-EEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHH
T ss_pred             ceeeccccccccccccccccccccceeeecccCCCc-ceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHH
Confidence            998875321111000  0000011222333344444 677876 79999999998643  23688898876 67999999


Q ss_pred             HHHHHHHhcCCCCC
Q psy4233         251 LDWFHVVMKKGEPD  264 (303)
Q Consensus       251 ~~~i~~~~g~~~~~  264 (303)
                      ++.+++++|+++.+
T Consensus       227 a~~l~~~~G~~v~~  240 (350)
T d1xgka_         227 CAAFSRALNRRVTY  240 (350)
T ss_dssp             HHHHHHHHTSCEEE
T ss_pred             HHHHHHHHCCcceE
Confidence            99999999998664

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=6.4e-21  Score=156.50  Aligned_cols=205  Identities=14%  Similarity=0.130  Sum_probs=150.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +|.++|+++||||++.||.++++.|+++|++|++.+|+....          .++..+++|++|+++++++++       
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            568899999999999999999999999999999999975432          347789999999988877654       


Q ss_pred             ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 ~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +.|++||+||...        .+.++..+++|+.++..+.+++    ++.+-.+||++||.......     .....|+.
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~a  147 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----GNQANYAA  147 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------CCHHHHH
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----cccHHHHH
Confidence            3799999999622        2344678999999988877654    44555699999998776421     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      +|...+.+.+..       ++++..+.||.+..+......  ..........+|+        .-+...+|+|+++++++
T Consensus       148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~--~~~~~~~~~~~pl--------~R~~~pedvA~~v~fL~  217 (237)
T d1uzma1         148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD--ERIQQGALQFIPA--------KRVGTPAEVAGVVSFLA  217 (237)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC--HHHHHHHGGGCTT--------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC--HHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence            999999887763       689999999998754221110  0111112223332        23688999999999999


Q ss_pred             cCC--CCCCcEEEEeCCc
Q psy4233         228 KDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~  243 (303)
                      ...  ...|+++.+.+|-
T Consensus       218 S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         218 SEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CchhcCCcCCeEEECCCC
Confidence            643  3479999998773

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=4.6e-21  Score=157.92  Aligned_cols=214  Identities=14%  Similarity=0.038  Sum_probs=155.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNV   90 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~   90 (303)
                      |+.++|+++||||++.||.++++.|+++|++|++.+|+..+..+..+   ..++++.+.+|++|++++++++++   +|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK---ECPGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HSTTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hcCCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            35678999999999999999999999999999999997543222211   235689999999999999998875   799


Q ss_pred             EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +||+||....        +.++..+++|+.++..+.+++..     .+-.++|++||.......     .....|+.+|.
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~asKa  152 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----PNLITYSSTKG  152 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----TTBHHHHHHHH
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC-----CccccccchHH
Confidence            9999996322        34457899999999998886532     233589999998776531     22367999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+..       |+++..+.||.+..|.......-..........+|+        .-+...+|+|+++++++...
T Consensus       153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--------~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL--------RKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT--------SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCch
Confidence            999988763       689999999988754211100001111111222332        23688999999999999643


Q ss_pred             --CCCCcEEEEeCCc
Q psy4233         231 --DAAGKIYQAVGPK  243 (303)
Q Consensus       231 --~~~g~~~~i~~~~  243 (303)
                        ...|+++.+.+|-
T Consensus       225 s~~itG~~i~vDGG~  239 (242)
T d1cyda_         225 SASTSGGGILVDAGY  239 (242)
T ss_dssp             GTTCCSSEEEESTTG
T ss_pred             hcCcCCceEEeCcch
Confidence              3479999998774

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=8.7e-21  Score=156.19  Aligned_cols=207  Identities=15%  Similarity=0.086  Sum_probs=153.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|++....+.....  ..++.++++|++|+++++++++       .+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            56889999999999999999999999999999999754332222222  2468899999999988877664       37


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.++..+++|+.++..+.+++    ++.+-.+||++||.......     .....|+.+|
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----~~~~~Y~asK  156 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----VACHGYTATK  156 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTBHHHHHHH
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-----ccccchhhHH
Confidence            999999996322        345578999999999888866    33444589999999886431     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       |+++..+.||.+..|.....       .......|+        .-+...+|+|+++++++..
T Consensus       157 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~~~pl--------~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         157 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-------PEDIFQTAL--------GRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-------CTTCSCCSS--------SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-------hHHHHhccc--------cCCCCHHHHHHHHHHHhCh
Confidence            9999988763       68999999998876532211       001112221        2368999999999999964


Q ss_pred             C--CCCCcEEEEeCCcc
Q psy4233         230 P--DAAGKIYQAVGPKR  244 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~~  244 (303)
                      .  ...|+++.+.+|..
T Consensus       222 ~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhCCCcCCEEEECCCee
Confidence            3  34799999988764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7e-21  Score=157.08  Aligned_cols=213  Identities=12%  Similarity=0.042  Sum_probs=154.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVV   91 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~v   91 (303)
                      .+++|+++||||++.||.++++.|+++|++|++.+|+..+. +.+..  ..++++.+.+|++|.++++++++.   +|++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVR--ECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHH--HSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHH--hcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            35789999999999999999999999999999999975432 22221  225688999999999999988865   7999


Q ss_pred             EEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          92 INLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      ||+||....        +.+...+++|+.++..+.+++..     .+..++|++||.......     .....|+.+|..
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-----~~~~~Y~asKaa  155 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----TNHSVYCSTKGA  155 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----TTBHHHHHHHHH
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc-----cchhhhhhhHHH
Confidence            999986322        34457899999998888876532     234599999999876531     224679999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .+.+.+..       ++++..+.||.+..|.......-....+.....+|+        .-+...+|+|+++++++... 
T Consensus       156 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--------~R~~~peevA~~v~fL~S~~a  227 (244)
T d1pr9a_         156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL--------GKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT--------CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCchh
Confidence            99988763       689999999988765211000000111111223332        23688999999999999643 


Q ss_pred             -CCCCcEEEEeCCc
Q psy4233         231 -DAAGKIYQAVGPK  243 (303)
Q Consensus       231 -~~~g~~~~i~~~~  243 (303)
                       ...|+++.+.+|-
T Consensus       228 ~~itG~~i~vDGG~  241 (244)
T d1pr9a_         228 GMTTGSTLPVEGGF  241 (244)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             CCcCCcEEEECccH
Confidence             3478999998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=1.3e-20  Score=155.27  Aligned_cols=210  Identities=10%  Similarity=-0.025  Sum_probs=153.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++|+++||||++.||.++++.|+++|++|++.+|+.... +....   .-+++.+.+|++|+++++++++       +
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-REAAE---AVGAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHH---TTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH---HcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999999975332 22221   1247889999999998887654       3


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      +|++||+||....        +.++..+++|+.++..+.+++..    .+-..++++||....+.      .....|+.+
T Consensus        78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~------~~~~~Y~as  151 (242)
T d1ulsa_          78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------LGQANYAAS  151 (242)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------TTCHHHHHH
T ss_pred             ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC------CCCcchHHH
Confidence            7999999996322        34457899999999998887643    34447777777655442      334689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      |...+.+.+..       ++++..+.||.+-.|..... ......   ....+|+        .-+...+|+|+++++++
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~---~~~~~pl--------~R~~~pedia~~v~fL~  220 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK---AIAATPL--------GRAGKPLEVAYAALFLL  220 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH---HHHTCTT--------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHH---HHhcCCC--------CCCCCHHHHHHHHHHHh
Confidence            99999988763       68999999999987643311 111111   2223332        23678999999999999


Q ss_pred             cCC--CCCCcEEEEeCCccc
Q psy4233         228 KDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       228 ~~~--~~~g~~~~i~~~~~~  245 (303)
                      ...  ...|+++.+.+|..+
T Consensus       221 S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         221 SDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             chhhCCCCCcEEEECCCccC
Confidence            643  347999999887643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.85  E-value=2e-20  Score=155.69  Aligned_cols=218  Identities=12%  Similarity=0.043  Sum_probs=156.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .+++|+++||||++.||.+++++|+++|++|++..|+..+..+... . .....++..+.+|++|++++.++++      
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999998654332221 1 1122468899999999988887664      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCC-ceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGV-EKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|++||+||....        +.+...+++|+.++..+.+++    ++.+. ..||++||......     ......|
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~-----~~~~~~Y  158 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----WPLFVHY  158 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----CTTCHHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc-----Ccccccc
Confidence             47999999996322        344578999999988887765    33343 36899999877642     1234679


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       ++++..+.||.+..|.......-..........+|+        .-+...+|+|+++++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pediA~~v~f  230 (261)
T d1geea_         159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM--------GYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT--------SSCBCHHHHHHHHHH
T ss_pred             ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHH
Confidence            99999999988763       799999999999765322110001111112223332        236789999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCccc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++...  ...|+++.+.+|..+
T Consensus       231 L~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         231 LASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhcCCcCCeEEECCCeeC
Confidence            99643  247999999888754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.2e-21  Score=158.93  Aligned_cols=221  Identities=14%  Similarity=0.066  Sum_probs=159.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+..+..+....   .....++.++.+|++|+++++++++      
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999975433222221   1122468899999999988887664      


Q ss_pred             -ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHh----cC---CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          87 -YSNVVINLIGREFATKNFTIADANVEIPARLARLSKE----MG---VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        87 -~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                       ++|++||+||.......+..+++|+.++..+.+++-.    .+   -.+||++||......     ......|+.+|..
T Consensus        81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa  155 (254)
T d2gdza1          81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----VAQQPVYCASKHG  155 (254)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTCHHHHHHHHH
T ss_pred             CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-----CCCccchHHHHHH
Confidence             4899999999988888899999999988877776632    21   247999999987642     1234579999999


Q ss_pred             HHHHHHh---------hCCCEEEEeecceeeCCCchhh------HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         159 GEKEVLR---------EFPEATIFRPSDMYGSGDKFLR------YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       159 ~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .+.+.+.         .++++..+.||.+-.|......      ............+|+        .-+...+|+|+++
T Consensus       156 l~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v  227 (254)
T d2gdza1         156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY--------YGILDPPLIANGL  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH--------HCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC--------CCCcCHHHHHHHH
Confidence            8887652         2688999999988643211000      000000001112221        2357889999999


Q ss_pred             HHHhcCCCCCCcEEEEeCCcccCHHH
Q psy4233         224 VAACKDPDAAGKIYQAVGPKRYLLSE  249 (303)
Q Consensus       224 ~~~~~~~~~~g~~~~i~~~~~~s~~e  249 (303)
                      ++++.++...|+++.+.+|..+.+.|
T Consensus       228 ~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         228 ITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHcCCCCCCCEEEECCCCeeeccc
Confidence            99998766689999999998766554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=2e-20  Score=154.88  Aligned_cols=217  Identities=14%  Similarity=0.078  Sum_probs=154.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++++||||++.||.++++.|+++|++|++.+|+.....+.....  ....++..+.+|++|++++.++++      
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999754432222111  112458899999999988887664      


Q ss_pred             -ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ++|++||+||...        .+.+...+++|+.++..+.+++-    +.+-.++|++||.......    ......|+
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~----~~~~~~Y~  157 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----MPNISAYA  157 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----SSSCHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc----CccccchH
Confidence             4899999999632        23445788999999988888764    3444599999987553211    12235799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       |+++..+.||.+-.+.......-..........+|+        .-+...+|+|++++++
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pedvA~~v~fL  229 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL--------GRTGVPEDLKGVAVFL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT--------SSCBCGGGGHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHH
Confidence            9999999988763       799999999999876543211111111112223332        2357889999999999


Q ss_pred             hcCC--CCCCcEEEEeCCc
Q psy4233         227 CKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~~  243 (303)
                      +...  ...|+++.+.+|-
T Consensus       230 ~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         230 ASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTG
T ss_pred             hCchhCCCcCcEEEeCcCe
Confidence            8643  2379999998774

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=6.6e-21  Score=157.05  Aligned_cols=212  Identities=13%  Similarity=0.078  Sum_probs=153.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||++.||.++++.|+++|++|++.+|+.+...+.....  ..+...+.+|++|+++++++++       ++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL--GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            56889999999999999999999999999999999754332222222  1458889999999988887664       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.+...+++|+.++..+.+++    ++.+-.+||++||.......     .....|+.+|
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----~~~~~Y~asK  154 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN-----GGQANYAAAK  154 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TTCHHHHHHH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC-----CCCHHHHHHH
Confidence            999999986322        344578999999999988877    33445699999998775321     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++++..+.||.+-.+....  ............+|+        .-+...+|+|+++++++..
T Consensus       155 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~--~~~~~~~~~~~~~pl--------~R~~~pedvA~~v~fL~S~  224 (243)
T d1q7ba_         155 AGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA--LSDDQRAGILAQVPA--------GRLGGAQEIANAVAFLASD  224 (243)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHTTCTT--------SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh--hhhhHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhCc
Confidence            9999988763       6899999999886542110  011111111222332        2368899999999999964


Q ss_pred             C--CCCCcEEEEeCCcc
Q psy4233         230 P--DAAGKIYQAVGPKR  244 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~~  244 (303)
                      .  ...|+++++.+|-.
T Consensus       225 ~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         225 EAAYITGETLHVNGGMY  241 (243)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             hhcCCcCCeEEECCCeE
Confidence            3  24799999988743

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.84  E-value=1.7e-20  Score=155.84  Aligned_cols=216  Identities=10%  Similarity=0.017  Sum_probs=156.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.+...+.....+  .++..+.+|++|++++.++++       ++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            568999999999999999999999999999999997543333222222  468899999999998887664       37


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----h-cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----E-MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |++||+||....        +.++..+++|+.++..+.+++.    + ..-.+||++||......     ......|+.+
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~as  155 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-----EALVGVYCAT  155 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTCHHHHHH
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----cccccchhhh
Confidence            999999996322        3445789999999988887642    2 22358999999887642     1234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHH--------HHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHM--------WRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      |...+.+.+..       |+++..+.||.+-.|..... ......        .+.....+|+        .-+...+|+
T Consensus       156 Kaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~~~p~ev  227 (256)
T d1k2wa_         156 KAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF--------GRMGRAEDL  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT--------SSCBCHHHH
T ss_pred             hhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC--------CCCcCHHHH
Confidence            99999888763       68999999998877643211 111100        0001112222        236889999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      |.++++++...  ...|+.+.+.+|..+|
T Consensus       228 A~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         228 TGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHhCchhCCccCceEEECcchhhC
Confidence            99999998643  3479999999887654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.84  E-value=5e-20  Score=152.19  Aligned_cols=214  Identities=14%  Similarity=0.061  Sum_probs=149.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|++.+..+.. ......++..+.+|++|++++.++++       ++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA-IRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-HHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56889999999999999999999999999999999764332221 11122568999999999998887653       48


Q ss_pred             CEEEEccccCc--------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREF--------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||...        .+.+...+++|+.++..+.+++    ++.+-.++|++||......     ......|+.+|
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----~~~~~~Y~asK  156 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----IEAYTHYISTK  156 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----CSSCHHHHHHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-----Ccccccchhhh
Confidence            99999999632        2345578999999999988876    3445569999999987642     12346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      ...+.+.+..       ++++..+.||.+..|....... ....    ....-.  .... .-+...+|+|+++++++..
T Consensus       157 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~----~~~~~~--~~~l-~r~~~pedvA~~v~fL~S~  228 (247)
T d2ew8a1         157 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL-SAMF----DVLPNM--LQAI-PRLQVPLDLTGAAAFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------CT--TSSS-CSCCCTHHHHHHHHHHTSG
T ss_pred             ccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc-chhH----HHHHHH--hccC-CCCCCHHHHHHHHHHHhCc
Confidence            9999887763       6899999999987664321100 0000    000000  0011 2357889999999999964


Q ss_pred             C--CCCCcEEEEeCCc
Q psy4233         230 P--DAAGKIYQAVGPK  243 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~  243 (303)
                      .  ...|+++.+.+|-
T Consensus       229 ~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         229 DASFITGQTLAVDGGM  244 (247)
T ss_dssp             GGTTCCSCEEEESSSC
T ss_pred             hhcCCcCCeEEECCCE
Confidence            3  2479999998774

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=1.8e-20  Score=155.17  Aligned_cols=214  Identities=13%  Similarity=0.032  Sum_probs=154.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      .++++|.++||||++.||.+++++|+++|++|++.+|+.....+..... ....++..+.+|++|++++.++++      
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999999754332222211 122468999999999998887664      


Q ss_pred             -ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       ..|++||+||...        .+.+...+++|+.++..+.+++    ++.+-.+||++||......     ......|+
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-----~~~~~~Y~  160 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-----NVGQANYS  160 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----CTTCHHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC-----CCCCHHHH
Confidence             4899999998622        1345678999999998888865    3445569999999877532     12346899


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      .+|...+.+.+..       |+++..+.||.+..+.....  .....+.....+|+        .-+...+|+|++++++
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl--------~R~~~pedvA~~v~fL  230 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPA--------GRMGTPEEVANLACFL  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9999999988763       68999999999987643211  11111112223332        2368899999999999


Q ss_pred             hcCC--CCCCcEEEEeCC
Q psy4233         227 CKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       227 ~~~~--~~~g~~~~i~~~  242 (303)
                      +...  ...|+++.+.+|
T Consensus       231 ~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         231 SSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhCCCcCcEEEECCC
Confidence            9643  237889999876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.83  E-value=3.1e-20  Score=153.80  Aligned_cols=214  Identities=15%  Similarity=0.091  Sum_probs=151.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++++++||||++.||.++++.|+++|++|++.+|+.+...+..+......++.++.+|++|++++.++++       ++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            56899999999999999999999999999999999754333222233334579999999999988877654       37


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCC-ceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGV-EKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |++||+||....        +.+...+++|+.++..+.+++-    +.+. .++|++||......     ......|+.+
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-----~~~~~~Y~as  158 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----DPSLGAYNAS  158 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----CTTCHHHHHH
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----CCCchhHHHH
Confidence            999999986322        3345788999999999888763    3343 38899999877542     1234689999


Q ss_pred             HHHHHHHHHh---------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLR---------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |..++.+.+.         .++++..+.||.+..|....... ..........+|+        .-+...+|+|++++++
T Consensus       159 Kaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl--------~R~~~pedvA~~v~fL  229 (251)
T d1zk4a1         159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPM--------GHIGEPNDIAYICVYL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTT--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCC--------CCCcCHHHHHHHHHHH
Confidence            9998876553         25889999999887542111000 0011101112221        2368999999999999


Q ss_pred             hcCCC--CCCcEEEEeCCc
Q psy4233         227 CKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~  243 (303)
                      +....  ..|+.+.+.+|-
T Consensus       230 ~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         230 ASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTG
T ss_pred             hCchhCCCcCcEEEECccc
Confidence            96432  379999998774

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.83  E-value=5.5e-20  Score=152.97  Aligned_cols=220  Identities=16%  Similarity=0.070  Sum_probs=156.6

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +|.++++|+++||||++.||.++++.|+++|++|++.+|+.....+..... ....++..+.+|++|+++++++++    
T Consensus         2 g~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           2 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999754432222211 123568899999999988776542    


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                          ..|++||+||....        +.++..+++|+.++..+.+++.    +.+-.++|++||.......     ....
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----~~~~  156 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----PYEA  156 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----TTCH
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc-----cccc
Confidence                27999999996322        3445789999999988888663    3444699999998775421     2346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh---hHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL---RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      .|+.+|...+.+.+..       ++++..+.||.+..|.....   ......+......+|+        .-+...+|+|
T Consensus       157 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~g~pedvA  228 (259)
T d2ae2a_         157 VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL--------RRMGEPKELA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT--------CSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC--------CCCcCHHHHH
Confidence            8999999999988763       68999999998875421100   0001111111122332        2367899999


Q ss_pred             HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++++++...  ...|+.+.+.+|-.
T Consensus       229 ~~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         229 AMVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCchhCCCcCcEEEECCCeE
Confidence            9999999743  34799999987743

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.83  E-value=6.2e-20  Score=151.96  Aligned_cols=208  Identities=11%  Similarity=0.064  Sum_probs=152.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      .++|+++||||++.||.+++++|+++|++|++.+|+..+..+..+..  ..++.++.+|++|+++++++++       ++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            56899999999999999999999999999999999754433332222  2468999999999998887664       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.++..+++|+.++..+.+++.    +.+-.+||++||.......     .....|+.+|
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~-----~~~~~Y~asK  155 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----ALTSSYGASK  155 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCHHHHHHH
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-----cchhhHHHHH
Confidence            999999996322        3445789999999999888763    4455699999999876531     2346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh----hhcceeeecCCCceeeCc-eeHHHHHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH----VFRKLAVYKKGEETIKQP-VYVGDVAAAIV  224 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-i~~~Dva~~~~  224 (303)
                      ...+.+.+..       ++++..+.||.+..|.      .......    ....+|+        .-+ +..+|+|++++
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~------~~~~~~~~~~~~~~~~pl--------~R~g~~PedvA~~v~  221 (254)
T d1hdca_         156 WGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM------TAETGIRQGEGNYPNTPM--------GRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH------HHHHTCCCSTTSCTTSTT--------SSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc------chhcCHHHHHHHHhCCCC--------CCCCCCHHHHHHHHH
Confidence            9999988763       6899999999886431      1111100    0111111        112 35899999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCcc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      +++...  ...|+++.+.+|-.
T Consensus       222 fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhchhhCCCCCceEEeCCCcc
Confidence            999643  34799999988754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=6.3e-20  Score=152.21  Aligned_cols=215  Identities=13%  Similarity=0.120  Sum_probs=154.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +..++|+++||||++.||.+++++|+++|++|++.+|+.....+..... ....++.++++|++|+++++++++      
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999999754322221111 122468999999999988877653      


Q ss_pred             -ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 -YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 -~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                       ++|++||+||....       +.++..+++|+.++..+.+++.    +.+-.++|++||.......     .....|+.
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~-----~~~~~Y~a  161 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----INMTSYAS  161 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----TTCHHHHH
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-----cccccchh
Confidence             48999999996322       3445788999999988887663    3344589999998776531     23468999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCc--hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK--FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +|...+.+.+..       ++++..+.||.+..+...  ....   ..+.....+|+        .-+...+|+|+++++
T Consensus       162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e---~~~~~~~~~pl--------~R~g~pedvA~~v~f  230 (255)
T d1fmca_         162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---IEQKMLQHTPI--------RRLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH---HHHHHHHTCSS--------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH---HHHHHHhcCCC--------CCCcCHHHHHHHHHH
Confidence            999999988763       689999999998754211  1111   11112223332        236789999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++...  ...|+++.+.+|..
T Consensus       231 L~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         231 LCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTSC
T ss_pred             HhCchhcCCcCCEEEECcCcc
Confidence            99643  34799999988864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.83  E-value=2.2e-19  Score=150.25  Aligned_cols=218  Identities=12%  Similarity=0.047  Sum_probs=156.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.....+.........++.++.+|++|+++++++++       ++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            56899999999999999999999999999999999754433333333334568899999999998887764       47


Q ss_pred             CEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          89 NVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        89 D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      |++||+||....          +.++..+++|+.++..+.+++-    +.+-.++|++||........    .....|+.
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~----~~~~~Y~a  159 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----GVSHVYTA  159 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----TSCHHHHH
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----ccccccch
Confidence            999999985211          2334678999999988888763    34455999999887764211    11236999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-h----hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-F----LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      +|...+.+.+..       ++++..+.||.+..|... .    ........   ....+..       .-+...+|+|++
T Consensus       160 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~---~~~~~~~-------gr~~~pedvA~~  229 (268)
T d2bgka1         160 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELA---HQAANLK-------GTLLRAEDVADA  229 (268)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHH---HHTCSSC-------SCCCCHHHHHHH
T ss_pred             hHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHH---HhccccC-------CCCcCHHHHHHH
Confidence            999999988763       689999999999877432 1    11111111   1111111       236789999999


Q ss_pred             HHHHhcCC--CCCCcEEEEeCCcccCH
Q psy4233         223 IVAACKDP--DAAGKIYQAVGPKRYLL  247 (303)
Q Consensus       223 ~~~~~~~~--~~~g~~~~i~~~~~~s~  247 (303)
                      +++++...  ...|+++.+.+|-+.+.
T Consensus       230 v~fL~S~~s~~itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         230 VAYLAGDESKYVSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHhChhhCCccCceEEECcCcccCC
Confidence            99999643  34799999998865543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.82  E-value=1.4e-19  Score=150.26  Aligned_cols=219  Identities=16%  Similarity=0.074  Sum_probs=154.6

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      |.++++|+++||||++.||.+++++|+++|++|++.+|++....+..+.. .....++++.+|++|.++++++++     
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999754322222211 122457889999999988876553     


Q ss_pred             --c-cCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 --Y-SNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~-~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        + .|++||+||...        .+.+...+++|+.++..+.+++.    +.+..++|++||.......     .....
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~-----~~~~~  155 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----PSVSL  155 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----TTCHH
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc-----ccchh
Confidence              2 799999998622        23456789999999988887664    3455699999999886532     23468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhH---HHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRY---YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA  220 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  220 (303)
                      |+.+|...+.+.+..       ++++..+.||.+..|.... ...   ...........+|+        .-+...+|+|
T Consensus       156 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------gR~~~pediA  227 (258)
T d1ae1a_         156 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM--------GRAGKPQEVS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--------CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC--------CCCcCHHHHH
Confidence            999999999988763       6899999999998763211 000   11111111222332        2378999999


Q ss_pred             HHHHHHhcC--CCCCCcEEEEeCCcc
Q psy4233         221 AAIVAACKD--PDAAGKIYQAVGPKR  244 (303)
Q Consensus       221 ~~~~~~~~~--~~~~g~~~~i~~~~~  244 (303)
                      +++++++..  ....|+.+.+.+|-.
T Consensus       228 ~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         228 ALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCcEEEeCCCee
Confidence            999999963  334788999987743

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.2e-19  Score=149.91  Aligned_cols=213  Identities=12%  Similarity=0.053  Sum_probs=151.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      .++|+++||||++.||.++++.|+++|++|++.+|+.+. .+..+.    .+...+++|++|.++++++++       ++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA----IGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH----HTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHH----cCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999999999997543 222111    236788999999988777654       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.++..+++|+.++.++.+++.    +.+-.+||++||......     ......|+.+|
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-----~~~~~~Y~asK  152 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----EQENAAYNASK  152 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----CTTBHHHHHHH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-----ccccchhHHHH
Confidence            999999996322        3345789999999999888774    344469999999988652     13346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH---HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY---YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      ...+.+.+..       ++++..+.||.+-.|..... ..   .....+.....+|+        .-+...+|+|+++++
T Consensus       153 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pedia~~v~f  224 (248)
T d2d1ya1         153 GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL--------RRLGKPEEVAEAVLF  224 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT--------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC--------CCCcCHHHHHHHHHH
Confidence            9999887663       68999999998865421100 00   00000001111221        236789999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcccC
Q psy4233         226 ACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ++...  ...|+.+.+.+|-.-|
T Consensus       225 L~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         225 LASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhcCCCCcEEEcCcCcccc
Confidence            99643  3479999998886544

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.82  E-value=6.2e-20  Score=152.89  Aligned_cols=213  Identities=16%  Similarity=0.140  Sum_probs=151.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++|+++||||++.||.++++.|+++|++|++..|+..+..+.....   ....++.++.+|++|++++.++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999764433322211   112468899999999998887764      


Q ss_pred             -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                       +.|++||+||....        +.+...+++|+.++..+.+++    ++.+-.++|++||.......     .....|+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----~~~~~Y~  156 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----ANKSAYV  156 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc-----CCcchhh
Confidence             37999999996322        344578999999988877765    34455699999999886531     2346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh------------hhcceeeecCCCceeeCce
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH------------VFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i  214 (303)
                      .+|...+.+.+..       |+.+..+.||.+-.|...  ..+......            ....+|+        .-+.
T Consensus       157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------~R~g  226 (260)
T d1x1ta1         157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE--KQISALAEKNGVDQETAARELLSEKQPS--------LQFV  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCTT--------CCCB
T ss_pred             hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh--hhhhhhhhhcCCChHHHHHHHHHhcCCC--------CCCc
Confidence            9999999888763       689999999998765321  111100000            0111221        2368


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233         215 YVGDVAAAIVAACKDP--DAAGKIYQAVGPK  243 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~  243 (303)
                      ..+|+|+++++++...  ...|+++.+.+|-
T Consensus       227 ~pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         227 TPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            8999999999999643  3479999998774

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.3e-19  Score=150.75  Aligned_cols=218  Identities=11%  Similarity=0.114  Sum_probs=149.4

Q ss_pred             cCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++|+++||||+|  .||.+++++|+++|++|++..|+...............+...+++|++|+++++++++      
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            45789999999998  7999999999999999988887643222211122222457889999999988887664      


Q ss_pred             -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+|+....            ......+++|+.++..+.+++...-  -.++|++||......     ......
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-----~~~~~~  159 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----VPKYNV  159 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----CTTCHH
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-----CCCchH
Confidence             47999999985211            1223577889988888888775421  148999999887642     133468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       |+++..+.||.+..+............+...+.+|+        .-+...+|+|++++
T Consensus       160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pedvA~~v~  231 (256)
T d1ulua_         160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL--------RRNITQEEVGNLGL  231 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTT--------SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence            999999999988763       799999999998876433221112222222233332        23678999999999


Q ss_pred             HHhcCCC--CCCcEEEEeCCccc
Q psy4233         225 AACKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~~--~~g~~~~i~~~~~~  245 (303)
                      +++....  ..|+++.+.+|..+
T Consensus       232 fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         232 FLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhCCccCCeEEECcCEeC
Confidence            9997432  47999999887643

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=8.3e-20  Score=151.83  Aligned_cols=219  Identities=16%  Similarity=0.077  Sum_probs=145.1

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      |.++++|+++||||++.||.++++.|+++|++|++.+|+..+..+.... .....++..+.+|++|++++.++++     
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999999999999975433222221 1223468999999999988776542     


Q ss_pred             --c-cCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 --Y-SNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 --~-~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                        + .|++||+||...        .+..+..+++|+.++..+.+++.    +.+-.++|++||.......     .....
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----~~~~~  157 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----SVGSI  157 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------CCH
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----ccccc
Confidence              3 799999999632        23455788999999988888663    3455699999998875421     23468


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       |+++..+.||.+-.|....... ....+.....+|+        .-+...+|+|.+++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl--------~R~~~pedvA~~v~  228 (259)
T d1xq1a_         158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPL--------GRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCC--------CCCcCHHHHHHHHH
Confidence            999999999887763       7999999999987664321100 0000001112221        23578899999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++...  ...|+.+.+.+|-.+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            999642  347899999887544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.82  E-value=2.2e-19  Score=149.21  Aligned_cols=217  Identities=11%  Similarity=0.021  Sum_probs=154.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc---cchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR---DLRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.....+   .+.......++..+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999997543221   11122223468899999999998887653      


Q ss_pred             -ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|++||+||...         .+.++..+++|+.++..+.+++.    +.+-.+||++||......     ......|
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----~~~~~~Y  156 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----IGNQSGY  156 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----CSSBHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-----CCCchHH
Confidence             4899999998521         12345789999999999888763    334558999999887642     1234789


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhh-----HHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLR-----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      +.+|..++.+.+..       ++++..+.||.+..|... ...     ............+|+        .-+...+|+
T Consensus       157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~~~p~dv  228 (258)
T d1iy8a_         157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS--------KRYGEAPEI  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT--------CSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC--------CCCcCHHHH
Confidence            99999999887663       799999999998754211 000     000111111122221        236889999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      |+++++++...  ...|+++.+.+|..-
T Consensus       229 A~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         229 AAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHhCchhcCCcCceEEcCcchhc
Confidence            99999999643  347999999888653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-19  Score=149.16  Aligned_cols=213  Identities=15%  Similarity=0.125  Sum_probs=152.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      .++|+++||||++.||.++++.|+++|++|++.+|+... .+.+..  ..+++.++.+|++|+++++++++       ++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESG-GRALEQ--ELPGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHH--HCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHH--hcCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            568999999999999999999999999999999997433 222222  22568999999999988887664       37


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      |++||+||....         +.++..+++|+.++..+.+++.    +.+ .++|++||.......     .....|+.+
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~-----~~~~~Y~as  154 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQ-----AQAVPYVAT  154 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCC-----TTCHHHHHH
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccc-----cCcchhHHH
Confidence            999999985211         2345789999999998888764    333 489999998775321     234689999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhh---HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLR---YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |...+.+.+..       ++++..+.||.+..|... ...   .....++......|+        .-+...+|+|++++
T Consensus       155 Kaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~g~p~eva~~v~  226 (250)
T d1ydea1         155 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL--------GRMGQPAEVGAAAV  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT--------SSCBCHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC--------CCCCCHHHHHHHHH
Confidence            99999987763       799999999988644211 000   000111111112221        23689999999999


Q ss_pred             HHhcC-CCCCCcEEEEeCCccc
Q psy4233         225 AACKD-PDAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~-~~~~g~~~~i~~~~~~  245 (303)
                      +++.. ....|+++.+.+|..+
T Consensus       227 fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         227 FLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHhCccCCCcCCeEEECCCccc
Confidence            98853 2237999999888654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.81  E-value=1.5e-19  Score=149.82  Aligned_cols=216  Identities=12%  Similarity=-0.022  Sum_probs=154.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--chhcCCCCceEEEecCCC-CHHHHHHHh-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLCGDLGQVLFQPYHPR-NDDEIRKAI-----   85 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~~~~~~~Dl~-d~~~~~~~~-----   85 (303)
                      |.+++++|+||||++.||.+++++|+++|.+|+++.|+.......  +.......++.++.+|++ +.+++.+++     
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998876543222  222233457999999997 555555543     


Q ss_pred             --cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHh----c---CCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          86 --KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE----M---GVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        86 --~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                        .++|++||+||.......+..+++|+.++.++.+++..    .   +..++|++||...+..     ......|+.+|
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-----~~~~~~Y~asK  155 (254)
T d1sbya1          81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----IHQVPVYSASK  155 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTSHHHHHHH
T ss_pred             HcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-----CCCCHHHHHHH
Confidence              34899999999988888899999999999998887643    1   2357999999888652     13346899999


Q ss_pred             HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .....+.+..       ++++..+.||.+..|.........    ...+.+...   ... +.....+++|++++.+++.
T Consensus       156 aal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~----~~~~~~~~~---~~~-~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL----DVEPRVAEL---LLS-HPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG----GSCTTHHHH---HTT-SCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch----hHHHHHHhc---ccc-CCCCCHHHHHHHHHHhhhC
Confidence            9999877663       789999999999865110000000    000000000   001 2356899999999998875


Q ss_pred             CCCCCcEEEEeCCc
Q psy4233         230 PDAAGKIYQAVGPK  243 (303)
Q Consensus       230 ~~~~g~~~~i~~~~  243 (303)
                      .. .|+++.+.+|.
T Consensus       228 ~~-tG~vi~vdgG~  240 (254)
T d1sbya1         228 NK-NGAIWKLDLGT  240 (254)
T ss_dssp             CC-TTCEEEEETTE
T ss_pred             CC-CCCEEEECCCE
Confidence            54 68899998874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.81  E-value=2.9e-19  Score=148.53  Aligned_cols=212  Identities=15%  Similarity=0.114  Sum_probs=150.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +|.+|||||++.||.+++++|+++|++|++.+|+.....+..+.. ....++..+.+|++|+++++++++       ++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            578899999999999999999999999999999754322221111 112468999999999998887664       379


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh------cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE------MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ++||+||....        +.++..+++|+.++..+.+++-.      .+..++|++||.......     .....|+.+
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-----~~~~~Y~as  156 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----VHAAPYSAS  156 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-----ccchhHHHH
Confidence            99999996322        34457899999999999998743      344589999998776531     234679999


Q ss_pred             HHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH--------HHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233         156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG--------HMWRHVFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      |..++.+.+..       ++++..+.||.+-.|.... .....        .........+|+        .-+...+|+
T Consensus       157 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl--------gR~~~pedi  228 (257)
T d2rhca1         157 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI--------GRYVQPSEV  228 (257)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT--------SSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC--------CCCcCHHHH
Confidence            99999988763       5788899999886442110 00000        011111122221        236889999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      |+++++++...  ...|+.+.+.+|
T Consensus       229 a~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         229 AEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCCcCceEEECcC
Confidence            99999999643  347899999776

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.80  E-value=1.9e-19  Score=148.37  Aligned_cols=210  Identities=15%  Similarity=0.131  Sum_probs=149.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK-------YSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   89 (303)
                      +.|+||||++.||.++++.|+++|++|++..++..+..+.+..  .....++.++.+|++|++++.++++       ++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999998876655443332221  1112468899999999988887654       379


Q ss_pred             EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      ++||+||....        +.++..+++|+.++..+.+++.    +.+-.+||++||......     ......|+.+|.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-----~~~~~~Y~asKa  156 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-----NIGQANYAAAKA  156 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----CTTCHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC-----CCCCHHHHHHHH
Confidence            99999986322        3455789999999999888763    345569999999877532     123468999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP  230 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  230 (303)
                      ..+.+.+..       |+++..+.||.+-.|...  .......+.....+|+        .-+...+|+|+++++++..+
T Consensus       157 al~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl--------~R~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTA--KLGEDMEKKILGTIPL--------GRTGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH--TTCHHHHHHHHTSCTT--------CSCBCHHHHHHHHHHHHHCS
T ss_pred             HHHHChHHHHHHHhhhCcEEEEEecceeccHHHH--HhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHHCCc
Confidence            999988763       689999999988654211  0111111112222332        23688999999999986333


Q ss_pred             C---CCCcEEEEeCCc
Q psy4233         231 D---AAGKIYQAVGPK  243 (303)
Q Consensus       231 ~---~~g~~~~i~~~~  243 (303)
                      .   ..|+++.+.+|-
T Consensus       227 ~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         227 AASYITGQAFTIDGGI  242 (244)
T ss_dssp             GGGGCCSCEEEESTTT
T ss_pred             hhcCCcCCeEEeCCCe
Confidence            2   378899998774

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4.5e-19  Score=150.11  Aligned_cols=216  Identities=14%  Similarity=0.122  Sum_probs=152.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc---cchhc---CCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR---DLRLC---GDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      .++++++||||++.||.+++++|+++|++|++.+|+.....+   ++...   ....++..+.+|++|++++.++++   
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999997543221   11111   112468899999999998887654   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                          ++|++||+||....        +.+...+++|+.++..+.+++..    .+-.++|++|+......      ....
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~------~~~~  163 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------PLAV  163 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC------TTCH
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc------cccc
Confidence                48999999986322        34457899999999998887743    33447888876544332      2346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc--hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK--FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      .|+.+|..++.+.+..       |+++..+.||.+..+...  ....-..........+|+        .-+...+|+|.
T Consensus       164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl--------gR~g~pedvA~  235 (297)
T d1yxma1         164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA--------KRIGVPEEVSS  235 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT--------SSCBCTHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC--------CCCcCHHHHHH
Confidence            7999999999888763       689999999999866321  111101111111122221        23678999999


Q ss_pred             HHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233         222 AIVAACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       222 ~~~~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      ++++++...  ...|+++.+.+|..+
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCchhcCcCCcEEEeCcChhh
Confidence            999999643  347999999888654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.80  E-value=3.9e-19  Score=147.51  Aligned_cols=211  Identities=14%  Similarity=0.034  Sum_probs=148.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   90 (303)
                      |.++||||++.||.+++++|+++|++|++.+|+.....+..... ....++..+.+|++|++++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            34699999999999999999999999999999754332221111 112468899999999988887654       4899


Q ss_pred             EEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          91 VINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        91 vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      +||+||...        .+.++..+++|+.++..+.+++-    +.+ -.++|++||.......     .....|+.+|.
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKa  156 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PELAVYSSSKF  156 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC-----cccccchhCHH
Confidence            999999632        23445789999999999888752    333 3579999998775421     23467999999


Q ss_pred             HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-----------hhcceeeecCCCceeeCceeHHHH
Q psy4233         158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-----------VFRKLAVYKKGEETIKQPVYVGDV  219 (303)
Q Consensus       158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~Dv  219 (303)
                      ..+.+.+..       |+++..+.||.+-.|...  .........           ....+|+        .-+...+|+
T Consensus       157 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~~~peev  226 (255)
T d1gega_         157 AVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA--EIDRQVSEAAGKPLGYGTAEFAKRITL--------GRLSEPEDV  226 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH--HHHHHHHHHHTCCTTHHHHHHHTTCTT--------CSCBCHHHH
T ss_pred             HHHhhHHHHHHHhhhhCcEEEEEecCcccChHHh--hhhhhhHhhhcccchhHHHHHHhcCCC--------CCCcCHHHH
Confidence            999887763       789999999988644211  111111000           1112221        236889999


Q ss_pred             HHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233         220 AAAIVAACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       220 a~~~~~~~~~~--~~~g~~~~i~~~~~  244 (303)
                      |+++++++...  ...|+.+.+.+|-.
T Consensus       227 A~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         227 AACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHhCchhCCccCcEEEecCCEE
Confidence            99999999643  23799999988754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.80  E-value=3.3e-19  Score=148.33  Aligned_cols=214  Identities=11%  Similarity=0.038  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +++++++||||++.||.++++.|+++|++|++.+|+.....+.... .....++..+.+|++|++++.++++       .
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999999999999999999999999999999975432222111 1222468999999999988887654       3


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                      +|++||+||....         +.+...+++|+.++..+.+++-    +.+-.++|++||.......     .....|+.
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----~~~~~Y~a  157 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----PNMAAYGT  157 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----TTBHHHHH
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----cchHHHHH
Confidence            8999999985321         2345788999999998888763    3344599999998775421     22358999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hh-HH------------HHHHHhhhcceeeecCCCceeeCc
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LR-YY------------GHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      +|...+.+.+..       |+++..+.||.+-.+.... .. ..            ....+.....+|+        .-+
T Consensus       158 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------~R~  229 (260)
T d1zema1         158 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------RRY  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------SSC
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC--------CCC
Confidence            999999988763       6899999999987552110 00 00            0000001112221        236


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      ...+|+|.++++++...  ...|+++.+.+|
T Consensus       230 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         230 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            78899999999999743  337888888765

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.80  E-value=3.1e-19  Score=148.62  Aligned_cols=221  Identities=13%  Similarity=0.044  Sum_probs=154.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      ++.++|++|||||++.||.++++.|+++|++|++.+|+..+..+.....  ....++..+.+|++|++++.++++     
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999865543322211  112468999999999998887664     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCC--CCCCCC
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPT--YYISGG  149 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~--~~~~~~  149 (303)
                        .+|++||+||....        +..+..+++|+.++..+.+++.     +.+-..++..|+.........  .+....
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~  164 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  164 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccc
Confidence              37999999986322        2345788999999888877653     223446777777665432111  011223


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       |+++..+.||.+-.+......  ..........+|+        .-+...+|+|++
T Consensus       165 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl--------~R~g~pedvA~~  234 (260)
T d1h5qa_         165 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD--KKIRDHQASNIPL--------NRFAQPEEMTGQ  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--HHHHHHHHHTCTT--------SSCBCGGGGHHH
T ss_pred             cchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC--HHHHHHHHhcCCC--------CCCcCHHHHHHH
Confidence            57999999999887663       689999999998765322111  1111112223332        236789999999


Q ss_pred             HHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         223 IVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       223 ~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      +++++....  ..|+++.+.+|..
T Consensus       235 v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         235 AILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHhcchhCCCcCceEEECCCee
Confidence            999996432  4799999988764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=1.5e-18  Score=142.04  Aligned_cols=205  Identities=13%  Similarity=0.093  Sum_probs=147.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~D~vi~~   94 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.+. .+.       .+.+++.+|+++ .+.+.+.+.++|++||+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~-l~~-------~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-LKR-------SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHH-------TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHh-------cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            468899999999999999999999999999999997432 111       236778899976 45566667779999999


Q ss_pred             cccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233          95 IGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        95 a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      ||....        +.++..+++|+.++..+.+++    ++.+..++|++||......     ......|+.+|...+.+
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~-----~~~~~~Y~asKaal~~l  148 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----IENLYTSNSARMALTGF  148 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc-----ccccccchhHHHHHHHH
Confidence            986322        234467889999888777766    4445568999999877652     13345789999999987


Q ss_pred             HHhh-------CCCEEEEeecceeeCCCchhhHHHH-HHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CC
Q psy4233         163 VLRE-------FPEATIFRPSDMYGSGDKFLRYYGH-MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DA  232 (303)
Q Consensus       163 ~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~  232 (303)
                      .+..       ++++..+.||.+-.+...  ..... ..+.....+|+        .-+...+|+|+++++++...  ..
T Consensus       149 tk~lA~ela~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~~pl--------~R~~~pediA~~v~fL~S~~s~~i  218 (234)
T d1o5ia_         149 LKTLSFEVAPYGITVNCVAPGWTETERVK--ELLSEEKKKQVESQIPM--------RRMAKPEEIASVVAFLCSEKASYL  218 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTHH--HHSCHHHHHHHHTTSTT--------SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhcccCeEEeecccCccchhhhh--hhcCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhChhhcCC
Confidence            7653       689999999998766422  11111 11112223332        23689999999999998643  33


Q ss_pred             CCcEEEEeCCc
Q psy4233         233 AGKIYQAVGPK  243 (303)
Q Consensus       233 ~g~~~~i~~~~  243 (303)
                      .|+++.+.+|-
T Consensus       219 tG~~i~vDGG~  229 (234)
T d1o5ia_         219 TGQTIVVDGGL  229 (234)
T ss_dssp             CSCEEEESTTC
T ss_pred             cCcEEEECccc
Confidence            79999998774

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.79  E-value=3.4e-19  Score=146.53  Aligned_cols=211  Identities=10%  Similarity=0.046  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      .++++++||||++.||.++++.|+++|++|++..|+.....+.....+  .++.++++|++++++++++++       ++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            468899999999999999999999999999999998654333333222  468899999999998877654       48


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                      |++||+|+....        +.+...+++|+.++..+.+++...-  -+.++++|+.+....      .....|+.+|..
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~------~~~~~Y~~sK~a  154 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------FGLAHYAAGKLG  154 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------HHHHHHHHCSSH
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc------cCccccchhhHH
Confidence            999999985321        3445788999999999999875432  235555555544331      223579999999


Q ss_pred             HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233         159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-  230 (303)
Q Consensus       159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-  230 (303)
                      .|.+.+..       ++++..+.||.+-.+....  ..........+..|+        .-+...+|+|+++++++... 
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~--~~~~~~~~~~~~~p~--------~r~~~p~dva~~v~fL~S~~s  224 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--LPPWAWEQEVGASPL--------GRAGRPEEVAQAALFLLSEES  224 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT--SCHHHHHHHHHTSTT--------CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh--hhHhHHHHHHhCCCC--------CCCcCHHHHHHHHHHHhcchh
Confidence            99988763       6899999999986553211  111111111222332        23678999999999999743 


Q ss_pred             -CCCCcEEEEeCCcc
Q psy4233         231 -DAAGKIYQAVGPKR  244 (303)
Q Consensus       231 -~~~g~~~~i~~~~~  244 (303)
                       ...|+++.+.+|..
T Consensus       225 ~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         225 AYITGQALYVDGGRS  239 (241)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             CCCcCceEEeCCCcc
Confidence             34788999988865

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.79  E-value=4.3e-19  Score=148.05  Aligned_cols=215  Identities=11%  Similarity=0.022  Sum_probs=146.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhc-CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLC-GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++|.++||||++.||.+++++|+++|++|++.+|+.....+.   +... ....++..+.+|++|.++++++++     
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999975432221   1111 122458999999999988887664     


Q ss_pred             --ccCEEEEccccCc------------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCc-cCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREF------------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALN-ADPNPPTYYIS  147 (303)
Q Consensus        87 --~~D~vi~~a~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~-~~~~~~~~~~~  147 (303)
                        ++|++||+||...            .+.++..+++|+.++..+.+++..    .+ ..+|+++|.. ....     ..
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~-----~~  156 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA-----TP  156 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC-----CT
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccccc-----CC
Confidence              4899999998521            123456888999999888887643    23 3566666544 3321     12


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh-------HHHHHHHhhhcceeeecCCCceeeCc
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-------YYGHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      ....|+.+|...+.+.+..       |+++..+.||.+-.+......       ............+|+        .-+
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------~R~  228 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA--------GVM  228 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT--------SSC
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC--------CCC
Confidence            2356999999999888763       799999999998765322110       011111111222332        236


Q ss_pred             eeHHHHHHHHHHHhcCC---CCCCcEEEEeCCcc
Q psy4233         214 VYVGDVAAAIVAACKDP---DAAGKIYQAVGPKR  244 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~---~~~g~~~~i~~~~~  244 (303)
                      ...+|+|+++++++..+   ...|+.+.+.+|..
T Consensus       229 g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         229 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            78999999999998633   24799999988764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=2.6e-18  Score=143.94  Aligned_cols=216  Identities=14%  Similarity=0.040  Sum_probs=152.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcC-CCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCG-DLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .++++++||||++.||.+++++|+++|++|++.+|+.....+.   +...+ ...++..+.+|++|++++.++++     
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999975332211   11111 12468999999999988877654     


Q ss_pred             --ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        87 --~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                        ++|++||+||....          +.++..+++|+.++..+.+++..    .+-..++++||.......     ....
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~-----~~~~  156 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-----SGYP  156 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC-----TTSH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC-----CCCc
Confidence              47999999985211          22456889999999988887743    344578888876654321     2235


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-------hhhHHHHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-------FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      .|+.+|...+.+.+..       |+++..+.||.+..|...       ........+......+|+        .-+...
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl--------gR~g~p  228 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV--------GHCGKP  228 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--------SSCBCH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC--------CCCcCH
Confidence            7999999999888763       799999999999765211       111111122112233332        236789


Q ss_pred             HHHHHHHHHHhcC---CCCCCcEEEEeCCcc
Q psy4233         217 GDVAAAIVAACKD---PDAAGKIYQAVGPKR  244 (303)
Q Consensus       217 ~Dva~~~~~~~~~---~~~~g~~~~i~~~~~  244 (303)
                      +|+|+++++++..   ....|+++.+.+|..
T Consensus       229 ediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         229 EEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            9999999999863   234899999998865

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.79  E-value=7.5e-19  Score=145.48  Aligned_cols=211  Identities=13%  Similarity=0.075  Sum_probs=148.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   88 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.....+.....  ..+..++.+|++|.++++++++       +.
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999999754322222222  2458889999999988877654       47


Q ss_pred             CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      |++||+||....        +.++..+++|+.++..+.+++..    .+ .+||++||......     ......|+.+|
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~-----~~~~~~Y~asK  155 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----IEQYAGYSASK  155 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----CTTBHHHHHHH
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcC-----ccccccccchh
Confidence            999999996322        34457899999998888877643    33 58999999887642     12346799999


Q ss_pred             HHHHHHHHhh---------CCCEEEEeecceeeCCCch---hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         157 YQGEKEVLRE---------FPEATIFRPSDMYGSGDKF---LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       157 ~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      ...+.+.+..         ++++..+.||.+..|....   .......   .....+..    .. -.+...+|+|++++
T Consensus       156 aal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~---~~~~~~~~----~~-gr~~~pedvA~~v~  227 (253)
T d1hxha_         156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM---VLHDPKLN----RA-GRAYMPERIAQLVL  227 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH---HBCBTTTB----TT-CCEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHH---HHhCcccc----cc-CCCCCHHHHHHHHH
Confidence            9999877642         3788889999886542110   0000000   01111110    11 23678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCC
Q psy4233         225 AACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~  242 (303)
                      +++...  ...|+.+++.+|
T Consensus       228 fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         228 FLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHSGGGTTCCSCEEEESSS
T ss_pred             HHhChhhCCCcCcEEEECcc
Confidence            999643  247999999776

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.78  E-value=3.1e-18  Score=143.40  Aligned_cols=216  Identities=12%  Similarity=0.054  Sum_probs=148.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcC-CCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCG-DLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      +++|+++||||++.||.++++.|+++|++|++.+|+.....+.   +...+ ...++..+.+|++|+++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999975432221   11111 12458999999999988887664     


Q ss_pred             --ccCEEEEccccCcc--------c----cchhhhhhhcchHHHHHHHHHh----cCCceEEEEec-CccCCCCCCCCCC
Q psy4233          87 --YSNVVINLIGREFA--------T----KNFTIADANVEIPARLARLSKE----MGVEKFIHISA-LNADPNPPTYYIS  147 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~----~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss-~~~~~~~~~~~~~  147 (303)
                        ++|++||+||....        +    .+...+++|+.++..+.+++..    .+ ..+|+++| .+....     ..
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~-----~~  156 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA-----QP  156 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-----CC
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccC-----CC
Confidence              47999999986321        1    1345778999999888887643    23 24555555 443321     12


Q ss_pred             CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-------hhhHHHHHHHhhhcceeeecCCCceeeCc
Q psy4233         148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-------FLRYYGHMWRHVFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (303)
                      ....|+.+|...+.+.+..       ++++..+.||.+-.|...       ...............+|+        .-+
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~  228 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI--------GAA  228 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--------SSC
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC--------CCC
Confidence            2357999999999888763       689999999988755211       011111111112223332        236


Q ss_pred             eeHHHHHHHHHHHhcCC---CCCCcEEEEeCCccc
Q psy4233         214 VYVGDVAAAIVAACKDP---DAAGKIYQAVGPKRY  245 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~---~~~g~~~~i~~~~~~  245 (303)
                      ...+|+|+++++++..+   ...|+++.+.+|..+
T Consensus       229 g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         229 GKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            88999999999998632   247999999988765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.1e-18  Score=139.75  Aligned_cols=213  Identities=11%  Similarity=0.034  Sum_probs=152.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVI   92 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi   92 (303)
                      +++++++||||++.||.++++.|+++|++|++.+|++.. .+.+.   ...+++...+|+.+.+..+....   +.|++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~-l~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK-LQELE---KYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HGGGG---GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHH---hccCCceeeeeccccccccccccccccceeEE
Confidence            578999999999999999999999999999999997432 22222   23568899999988877666554   489999


Q ss_pred             EccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233          93 NLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE  160 (303)
Q Consensus        93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e  160 (303)
                      |++|....        +.+...+++|+.++..+.+++..    .+-.++|++||....-.    +......|+.+|...+
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----~~~~~~~Y~~sKaal~  155 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK----GVVNRCVYSTTKAAVI  155 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB----CCTTBHHHHHHHHHHH
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC----CccchhHHHHHHHHHH
Confidence            99996322        34457889999999998887643    34459999998754211    1234467999999999


Q ss_pred             HHHHhh-------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233         161 KEVLRE-------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD  229 (303)
Q Consensus       161 ~~~~~~-------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  229 (303)
                      .+.+..       |+++..+.||.+-.|......    ............+|+        .-+...+|+|+++.+++..
T Consensus       156 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pedva~~v~fL~s~  227 (245)
T d2ag5a1         156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT--------GRFATAEEIAMLCVYLASD  227 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT--------SSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCh
Confidence            988763       689999999988765321100    000011111222332        2378999999999999974


Q ss_pred             C--CCCCcEEEEeCCcc
Q psy4233         230 P--DAAGKIYQAVGPKR  244 (303)
Q Consensus       230 ~--~~~g~~~~i~~~~~  244 (303)
                      +  ...|+.+.+.+|..
T Consensus       228 ~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         228 ESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             GGTTCCSCEEEECTTGG
T ss_pred             hhCCCcCceEEeCCCcC
Confidence            3  34799999988764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=4.8e-18  Score=141.30  Aligned_cols=218  Identities=15%  Similarity=0.093  Sum_probs=150.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .+.++|++|||||++.||.+++++|+++|++|++..|+..+..+.....  ....++..+.+|++|.+++++.++     
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999998877665543332211  122468999999999988887664     


Q ss_pred             --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233          87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR  154 (303)
Q Consensus        87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~  154 (303)
                        +.|++||+||....        +..+..+++|+.+...+++++...  .-.++++++|......    +......|+.
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~----~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----GIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----SCCSCHHHHH
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc----CCCCchhHHH
Confidence              37999999996322        233478899999998888887542  1236666665543221    1123467999


Q ss_pred             HHHHHHHHHHhh-------CCCEEEEeecceeeCCC----------chhhHH-HHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGD----------KFLRYY-GHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      +|...+.+.+..       ++++..|.||.+-.+..          ...... ..+.......+|+        .-+...
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------~R~g~p  229 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL--------KRIGYP  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT--------SSCBCH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC--------CCCcCH
Confidence            999999888763       79999999998864310          000000 0111111222332        237899


Q ss_pred             HHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233         217 GDVAAAIVAACKDPD--AAGKIYQAVGPK  243 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~--~~g~~~~i~~~~  243 (303)
                      +|+|+++++++....  -.|+++.+.+|.
T Consensus       230 ~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         230 ADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            999999999997543  378899988764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-18  Score=141.70  Aligned_cols=195  Identities=11%  Similarity=0.018  Sum_probs=142.9

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK----   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~----   86 (303)
                      +|++.+++.++||||++.||.+++++|+++|++|++.+|+..+..+.... .....++..+.+|++|++++.++++    
T Consensus         1 ~~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           1 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999975432222111 1223568999999999988887654    


Q ss_pred             ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                         ++|++||+||....        +..+..+++|+.++..+++++    ++.+-.++|++||.......     .....
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-----~~~~~  155 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----PFLLA  155 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----HHHHH
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-----CCcHH
Confidence               38999999996322        234578999999999888865    34555699999999887521     22357


Q ss_pred             hhHHHHHHHHHHHhh----------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE----------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA  221 (303)
Q Consensus       152 y~~~K~~~e~~~~~~----------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  221 (303)
                      |+.+|+..+.+.+..          |+.++.+.||.+-.+....            ...+       . ...+..+|+|+
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~------------~~~~-------~-~~~~~pe~va~  215 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------PSTS-------L-GPTLEPEEVVN  215 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------THHH-------H-CCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC------------cCcc-------c-cCCCCHHHHHH
Confidence            999999988877652          5788899999876542211            0001       1 23467899999


Q ss_pred             HHHHHhcCCC
Q psy4233         222 AIVAACKDPD  231 (303)
Q Consensus       222 ~~~~~~~~~~  231 (303)
                      .++..+..+.
T Consensus       216 ~i~~~~~~~~  225 (244)
T d1yb1a_         216 RLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHhcCC
Confidence            9998887543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.76  E-value=2.1e-17  Score=138.32  Aligned_cols=221  Identities=13%  Similarity=0.092  Sum_probs=153.1

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK---   86 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~---   86 (303)
                      ...++++|+++||||++.||.++++.|+++|++|++.+|+..+..+...  ......++..+.+|++|++++.+.++   
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3355789999999999999999999999999999999887654433222  11223568999999999988887654   


Q ss_pred             ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                          +.|++||+++....        ......+++|+.++..+.+++...  .-.++++++|......    +......|
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~----~~~~~~~Y  167 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----AVPKHAVY  167 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----SCSSCHHH
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc----cccchhhH
Confidence                37999999986322        234468889999999999888642  1247777777654321    11234569


Q ss_pred             hHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCch-h--------hHHH-HHHH-hhhcceeeecCCCceeeCce
Q psy4233         153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKF-L--------RYYG-HMWR-HVFRKLAVYKKGEETIKQPV  214 (303)
Q Consensus       153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~-~--------~~~~-~~~~-~~~~~~~~~~~~~~~~~~~i  214 (303)
                      +.+|...+.+.+.       .|+++..|.||.+-.+.... .        .... ...+ .....+|+        .-+.
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~~  239 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--------RRVG  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT--------CSCB
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC--------CCCc
Confidence            9999999988875       37999999999886431100 0        0000 0000 01122222        2368


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCcEEEEeCCcc
Q psy4233         215 YVGDVAAAIVAACKDPD--AAGKIYQAVGPKR  244 (303)
Q Consensus       215 ~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~  244 (303)
                      ..+|+|.++++++....  ..|++..+.+|..
T Consensus       240 ~peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         240 LPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence            99999999999997433  3799999988753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.76  E-value=4.8e-18  Score=142.44  Aligned_cols=214  Identities=12%  Similarity=0.007  Sum_probs=148.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      .+++++++||||++.||.+++++|+++|++|++.+|+.+...+.....+  .++..+.+|++|.++++++++       .
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG--DNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999999999997543322222222  468999999999988877654       4


Q ss_pred             cCEEEEccccCccc-------------cchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          88 SNVVINLIGREFAT-------------KNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        88 ~D~vi~~a~~~~~~-------------~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                      +|++||+||.....             .++..+++|+.++..+.+++.    +.+ .++|++||......     .....
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~-----~~~~~  153 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYP-----NGGGP  153 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTST-----TSSCH
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccC-----CCCCc
Confidence            89999999852211             135678899999888887763    333 47888888766432     12345


Q ss_pred             chhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchh--hHHHH------HHHhhhcceeeecCCCceeeCceeH
Q psy4233         151 QFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFL--RYYGH------MWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                      .|+.+|...+.+.+..      ++++..+.||.+-.+.....  .....      ........+|+        .-+...
T Consensus       154 ~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------gR~g~p  225 (276)
T d1bdba_         154 LYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI--------GRMPEV  225 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT--------SSCCCG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC--------CCCcCH
Confidence            7999999999887764      47888999999876532110  00000      00001122221        225788


Q ss_pred             HHHHHHHHHHhcC---CCCCCcEEEEeCCcc
Q psy4233         217 GDVAAAIVAACKD---PDAAGKIYQAVGPKR  244 (303)
Q Consensus       217 ~Dva~~~~~~~~~---~~~~g~~~~i~~~~~  244 (303)
                      +|+|+++++++..   ....|+.+++.+|-.
T Consensus       226 eeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         226 EEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             GGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             HHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            9999999998853   234799999988743

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.7e-18  Score=140.04  Aligned_cols=203  Identities=18%  Similarity=0.104  Sum_probs=139.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      ++++++|||||++.||.++++.|+++|++|++..|+.....+.   +.......++.++.+|++|++++.++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999999999875432221   2222233578999999999988877553      


Q ss_pred             -ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHH----HhcC--CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 -YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLS----KEMG--VEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 -~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                       ++|++||+||...        .+.....+++|+.+...+.+++    ++.+  -.++|++||.+.+...   |......
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---p~~~~~~  164 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---PLSVTHF  164 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---SCGGGHH
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---CCcccHH
Confidence             4899999998632        2344578899998888877765    3333  3599999998875321   1122346


Q ss_pred             hhHHHHHHHHHHHh---------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLR---------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       152 y~~~K~~~e~~~~~---------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      |+.+|...+.+.+.         .++.+..+.||.+-.+...  .............+|.        ..++..+|+|++
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~--~~~~~~~~~~~~~~~~--------~r~~~pedvA~~  234 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF--KLHDKDPEKAAATYEQ--------MKCLKPEDVAEA  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH--HHTTTCHHHHHHHHC-----------CBCHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh--hcChhhHHHHHhcCCC--------CCCcCHHHHHHH
Confidence            99999999987753         2578888999877543211  0000000001122222        346899999999


Q ss_pred             HHHHhcCCC
Q psy4233         223 IVAACKDPD  231 (303)
Q Consensus       223 ~~~~~~~~~  231 (303)
                      +++++..+.
T Consensus       235 v~fL~s~~a  243 (257)
T d1xg5a_         235 VIYVLSTPA  243 (257)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhCChh
Confidence            999997653

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.74  E-value=1.8e-17  Score=135.98  Aligned_cols=188  Identities=12%  Similarity=0.055  Sum_probs=137.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-------EEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQ-------IIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-----   86 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~-------V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   86 (303)
                      .||||||++.||.+++++|+++|++       |++.+|+.....+... ......++..+.+|++|++++.++++     
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999986       7888886433222211 11222568899999999988887654     


Q ss_pred             --ccCEEEEccccCc--------cccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 --YSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 --~~D~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                        ++|++||+||...        .+..+..+++|+.++..+.+++.    +.+-.++|++||.......     .....|
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----~~~~~Y  157 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-----RHSSIY  157 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTCHHH
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC-----CCChHH
Confidence              3799999999632        23445789999999999888764    3455699999999876531     234689


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       |+++..+.||.+-.|.....              +   ....  ..+...+|+|+++++
T Consensus       158 ~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~--------------~---~~~~--~~~~~PedvA~~v~~  218 (240)
T d2bd0a1         158 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV--------------D---DEMQ--ALMMMPEDIAAPVVQ  218 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC--------------C---STTG--GGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc--------------C---HhhH--hcCCCHHHHHHHHHH
Confidence            99999999877763       68999999998876532110              0   0011  135678999999999


Q ss_pred             HhcCCC
Q psy4233         226 ACKDPD  231 (303)
Q Consensus       226 ~~~~~~  231 (303)
                      ++.++.
T Consensus       219 l~s~~~  224 (240)
T d2bd0a1         219 AYLQPS  224 (240)
T ss_dssp             HHTSCT
T ss_pred             HHcCCc
Confidence            998654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.2e-17  Score=133.66  Aligned_cols=209  Identities=16%  Similarity=0.127  Sum_probs=146.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      |.++|.++||||++.||.+++++|+++|++|++.+|+.....+..+...  .+......|+.+.++++....       .
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CCccccccccccccccccccccccccccc
Confidence            5789999999999999999999999999999999998655443333222  457888999998776655432       3


Q ss_pred             cCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHHHhc----------CCceEEEEecCccCCCCCC
Q psy4233          88 SNVVINLIGREFA--------------TKNFTIADANVEIPARLARLSKEM----------GVEKFIHISALNADPNPPT  143 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~Ss~~~~~~~~~  143 (303)
                      .|.++++++....              +.....+++|+.++.++.+++...          +-.+||++||...+..   
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~---  156 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---  156 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC---
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC---
Confidence            6888888754111              233467899999999999887432          2237999999987542   


Q ss_pred             CCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeH
Q psy4233         144 YYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYV  216 (303)
Q Consensus       144 ~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  216 (303)
                        ......|+.+|...+.+.+..       ++++..+.||.+..+.....  ...........+|+.       .-+...
T Consensus       157 --~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~-------~R~g~p  225 (248)
T d2o23a1         157 --QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFP-------SRLGDP  225 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSS-------CSCBCH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC--CHHHHHHHHhcCCCC-------CCCcCH
Confidence              133468999999999988763       68999999999876643211  111111122233321       126789


Q ss_pred             HHHHHHHHHHhcCCCCCCcEEEE
Q psy4233         217 GDVAAAIVAACKDPDAAGKIYQA  239 (303)
Q Consensus       217 ~Dva~~~~~~~~~~~~~g~~~~i  239 (303)
                      +|+|++++++++.+...|++.++
T Consensus       226 eevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         226 AEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhCCCCCceEeEC
Confidence            99999999999865557777664

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.73  E-value=1.3e-17  Score=137.96  Aligned_cols=208  Identities=11%  Similarity=0.021  Sum_probs=143.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------cccCEEE
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYSNVVI   92 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~D~vi   92 (303)
                      +++||||++.||.++++.|+++|++|++.+|+.... +.+...    ...+..+|+.|.+++.+++       .++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~-~~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK-DELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH-HHHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999999999999875432 222211    1223456776655444433       3589999


Q ss_pred             EccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233          93 NLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG  159 (303)
Q Consensus        93 ~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~  159 (303)
                      |+||....         +.++..+++|+.++..+.+++    ++.+-.+||++||...+...     .....|+.+|...
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~-----~~~~~Y~asKaal  151 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----KELSTYTSARAGA  151 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----TTCHHHHHHHHHH
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc-----ccccccccccccH
Confidence            99985221         223467789999888888765    34455699999999876531     2235799999999


Q ss_pred             HHHHHhh-------CCCEEEEeecceeeCCCchhh------HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLR------YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      +.+.+..       ++++..+.||.+..+......      ..........+.+|+        .-+...+|+|++++++
T Consensus       152 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl--------~R~g~pedvA~~v~fL  223 (252)
T d1zmta1         152 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL--------QRLGTQKELGELVAFL  223 (252)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS--------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence            9988763       799999999999765432110      001111112223332        2268899999999999


Q ss_pred             hcCCC--CCCcEEEEeCCccc
Q psy4233         227 CKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       227 ~~~~~--~~g~~~~i~~~~~~  245 (303)
                      +....  ..|+++.+.+|-.+
T Consensus       224 ~S~~s~~iTG~~i~vdGG~~~  244 (252)
T d1zmta1         224 ASGSCDYLTGQVFWLAGGFPM  244 (252)
T ss_dssp             HTTSCGGGTTCEEEESTTCCC
T ss_pred             hCchhcCCcCCeEEECCCcee
Confidence            97543  37999999888543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.73  E-value=1.6e-17  Score=140.66  Aligned_cols=218  Identities=18%  Similarity=0.125  Sum_probs=146.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK------   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~------   86 (303)
                      +.++|+++||||+|.||.+++++|+++|++|++.+|+..+..+.....  ....++..+.+|++|.+++.+.+.      
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            467899999999999999999999999999999999854332221111  112458899999999998876553      


Q ss_pred             -ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 -YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 -~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                       ++|++||+||.....        .....+.+|......+...+.     ..+...++.+|+.......     .....|
T Consensus       102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~-----~~~~~Y  176 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----GFVVPS  176 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----TTCHHH
T ss_pred             cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-----cccchH
Confidence             489999999963322        233566677777666655432     2233467777776554321     223569


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      +.+|...+.+.+..       |+++..|.||.+..+... ...............+|+        .-+...+|+|++++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl--------~R~~~pediA~~v~  248 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC--------GRLGTVEELANLAA  248 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT--------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC--------CCCCCHHHHHHHHH
Confidence            99999999988763       689999999999765321 111111111112223332        23678999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++...  ...|++..+.+|..+
T Consensus       249 fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         249 FLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHhCchhcCCCCcEEEECCChhh
Confidence            999643  348999999988643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=7.4e-17  Score=133.98  Aligned_cols=217  Identities=14%  Similarity=0.148  Sum_probs=149.6

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++|++|||||+|  .||.++++.|+++|++|++..|+........+..........+..|+.+..+....+.       
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4689999999999  7999999999999999999999744222211222223457888999999877766553       


Q ss_pred             ccCEEEEccccCccc-------------cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233          87 YSNVVINLIGREFAT-------------KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ  151 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~  151 (303)
                      ..|.+||+++.....             .....+.+|+.+...+.+++...  +-+.+|++||.+....     ......
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~-----~~~~~~  157 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----IPNYNV  157 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTTTH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-----CCCcHH
Confidence            269999998753221             11245567777777777766542  2247888898876542     123467


Q ss_pred             hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233         152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV  224 (303)
Q Consensus       152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  224 (303)
                      |+.+|...+.+.+..       ++++..+.||.+..+.......-..........+|+        .-+...+|+|++++
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--------~R~~~peeia~~v~  229 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------RRTVTIEDVGNSAA  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--------SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC--------CCCcCHHHHHHHHH
Confidence            999999999988774       689999999999877543222212222212233332        23688999999999


Q ss_pred             HHhcCC--CCCCcEEEEeCCccc
Q psy4233         225 AACKDP--DAAGKIYQAVGPKRY  245 (303)
Q Consensus       225 ~~~~~~--~~~g~~~~i~~~~~~  245 (303)
                      +++.+.  .-.|+++.+.+|..+
T Consensus       230 fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         230 FLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCceEEECcCHHH
Confidence            999643  348999999888653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.71  E-value=2.1e-16  Score=131.25  Aligned_cols=197  Identities=13%  Similarity=0.074  Sum_probs=139.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc--c-ch-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR--D-LR-LCGDLGQVLFQPYHPRNDDEIRKAIKY-----   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~--~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   87 (303)
                      ..+|+||||+|.||.+++++|+++|+ .|+++.|+..+...  . .. +.....+++++.+|++|.+++.++++.     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            35899999999999999999999998 47777886432211  1 11 111225699999999999999988754     


Q ss_pred             -cCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233          88 -SNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ  158 (303)
Q Consensus        88 -~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~  158 (303)
                       .|.|||++|.....        .....++.|+.++.++.++++..+..++|++||....-..     .....|+.+|..
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~-----~~~~~YaAaka~  163 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA-----PGLGGYAPGNAY  163 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC-----TTCTTTHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC-----cccHHHHHHHHh
Confidence             68999999963321        2235778999999999999988888899999998775321     234689999999


Q ss_pred             HHHHHHhh---CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233         159 GEKEVLRE---FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA  233 (303)
Q Consensus       159 ~e~~~~~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  233 (303)
                      .+.+.++.   |++++.+.||.+.+++...... ...+  .          ... ...+..+++++++..++.++...
T Consensus       164 l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~-~~~~--~----------~~G-~~~~~~~~~~~~l~~~l~~~~~~  227 (259)
T d2fr1a1         164 LDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-ADRF--R----------RHG-VIEMPPETACRALQNALDRAEVC  227 (259)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECCBC-------------C--T----------TTT-EECBCHHHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHhCCCCEEECCCCcccCCccccchH-HHHH--H----------hcC-CCCCCHHHHHHHHHHHHhCCCce
Confidence            99877654   8999999999888664321111 1000  0          011 23578999999999999875543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=6.5e-17  Score=136.94  Aligned_cols=223  Identities=13%  Similarity=0.091  Sum_probs=153.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-----ccchh-c-CCCCceEEEecCCCCHHHHHHHh---
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-----RDLRL-C-GDLGQVLFQPYHPRNDDEIRKAI---   85 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-----~~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~---   85 (303)
                      +++++++||||++.||.++++.|+++|++|++.+|+.....     ..... . ........+.+|+.|.++.++.+   
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            46889999999999999999999999999999887643211     00000 0 00012345667777765555433   


Q ss_pred             ----cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233          86 ----KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        86 ----~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                          .++|++||+||....        +.++..+++|+.++..+.+++    ++.+-.+||++||.......     ...
T Consensus        85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~-----~~~  159 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-----FGQ  159 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TTC
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-----CCc
Confidence                348999999996322        344578999999999988876    34455699999998764321     234


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                      ..|+.+|...+.+.+..       |+++..+.||.+-.+......                   ... ..++..+|+|.+
T Consensus       160 ~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-------------------~~~-~~~~~PedvA~~  219 (302)
T d1gz6a_         160 ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-------------------EDL-VEALKPEYVAPL  219 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-------------------HHH-HHHSCGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-------------------Hhh-HhcCCHHHHHHH
Confidence            68999999999987763       689999999876432211100                   011 234567999999


Q ss_pred             HHHHhcCC-CCCCcEEEEeCC-------------------cccCHHHHHHHHHHHhcCCCC
Q psy4233         223 IVAACKDP-DAAGKIYQAVGP-------------------KRYLLSELLDWFHVVMKKGEP  263 (303)
Q Consensus       223 ~~~~~~~~-~~~g~~~~i~~~-------------------~~~s~~e~~~~i~~~~g~~~~  263 (303)
                      +++++... ...|+++.+.+|                   ++.|.+++++.+.+....+..
T Consensus       220 v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~~  280 (302)
T d1gz6a_         220 VLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA  280 (302)
T ss_dssp             HHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred             HHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcccC
Confidence            99998633 236777777544                   346788888888888775543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.70  E-value=1.3e-16  Score=131.70  Aligned_cols=162  Identities=15%  Similarity=0.064  Sum_probs=118.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh---CCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK---QGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   86 (303)
                      ||+||||||++.||.+++++|++   +|++|++..|+.....+........+++.++.+|++|+++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            68999999999999999999974   6899999999865433222222234679999999999877765433        


Q ss_pred             -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----c-----------CCceEEEEecCccCCCC
Q psy4233          87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----M-----------GVEKFIHISALNADPNP  141 (303)
Q Consensus        87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~~v~~Ss~~~~~~~  141 (303)
                       ++|++||+||....         ...+..+++|+.++..+.+++..    .           +..++|++||....-..
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence             37999999986321         12346788999999988887632    1           23589999997654321


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233         142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS  181 (303)
Q Consensus       142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~  181 (303)
                      .  +......|+.+|.....+.+..       ++.+..+.||.+-.+
T Consensus       162 ~--~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         162 N--TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             C--CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             C--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            1  1122347999999998877653       689999999988654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.3e-16  Score=132.60  Aligned_cols=202  Identities=15%  Similarity=0.125  Sum_probs=135.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEee---cCCCcccc---cchh-cCCCCceEEEecCCCCHHHHHHHhcc---
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPY---RGNFYDVR---DLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY---   87 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~---R~~~~~~~---~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---   87 (303)
                      .+.|+||||++.||.++++.|+++|.+|+.+.   |+......   .... .....++..+.+|++|.+++.++++.   
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            35679999999999999999999997755443   33221111   1111 12235699999999999999887643   


Q ss_pred             --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233          88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY  153 (303)
Q Consensus        88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~  153 (303)
                        .|+++|++|....        +.....+++|+.++.++.+++    ++.+-.++|++||......     ......|+
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-----~~~~~~Y~  156 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----LPFNDVYC  156 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----CTTCHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-----CCCchHHH
Confidence              7999999986322        344578899999988888875    4455569999999987642     12346799


Q ss_pred             HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCc-hhh------------HHHHHHHh--hhcceeeecCCCceee
Q psy4233         154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDK-FLR------------YYGHMWRH--VFRKLAVYKKGEETIK  211 (303)
Q Consensus       154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~-~~~------------~~~~~~~~--~~~~~~~~~~~~~~~~  211 (303)
                      .+|+..+.+.+..       |+++..+.||.+-.+... ...            ....+...  ..+..+.        .
T Consensus       157 asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  228 (285)
T d1jtva_         157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR--------E  228 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHH--------H
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhc--------c
Confidence            9999999877653       799999999998754321 000            00000000  0111111        1


Q ss_pred             CceeHHHHHHHHHHHhcCCCC
Q psy4233         212 QPVYVGDVAAAIVAACKDPDA  232 (303)
Q Consensus       212 ~~i~~~Dva~~~~~~~~~~~~  232 (303)
                      .+...+|+|+++++++..+..
T Consensus       229 ~~~~PeeVA~~v~~~~~~~~p  249 (285)
T d1jtva_         229 AAQNPEEVAEVFLTALRAPKP  249 (285)
T ss_dssp             HCBCHHHHHHHHHHHHHCSSC
T ss_pred             cCCCHHHHHHHHHHHHhCCCC
Confidence            256789999999999986543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=1.5e-16  Score=132.15  Aligned_cols=212  Identities=13%  Similarity=0.067  Sum_probs=143.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHh---CCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc--
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGK---QGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK--   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   86 (303)
                      .++++.++||||++.||.+++++|.+   +|++|++..|+.....+.   +.......++..+.+|++|++++.++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35688999999999999999999975   789999999975432221   1112223468999999999998887753  


Q ss_pred             ---------ccCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHhc----C--CceEEEEecCccCCC
Q psy4233          87 ---------YSNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKEM----G--VEKFIHISALNADPN  140 (303)
Q Consensus        87 ---------~~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~v~~Ss~~~~~~  140 (303)
                               ..|+++|+||....           +..+..+++|+.++..+.+++...    +  ..++|++||......
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     25789999885211           123468899999999999988542    2  248999999877642


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhh-----CCCEEEEeecceeeCCCchhhHH---HHHHHhhhcceeeecCCCceeeC
Q psy4233         141 PPTYYISGGSQFYRTKYQGEKEVLRE-----FPEATIFRPSDMYGSGDKFLRYY---GHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       141 ~~~~~~~~~~~y~~~K~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                           ......|+.+|...+.+.+..     ++++..+.||.+..+........   ...........+.        ..
T Consensus       163 -----~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--------~r  229 (259)
T d1oaaa_         163 -----YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD--------GA  229 (259)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT--------TC
T ss_pred             -----CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC--------CC
Confidence                 133468999999999888764     68899999988875421100000   0000000111111        23


Q ss_pred             ceeHHHHHHHHHHHhcCCC-CCCcEEEE
Q psy4233         213 PVYVGDVAAAIVAACKDPD-AAGKIYQA  239 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~~-~~g~~~~i  239 (303)
                      +...+|+|++++.++.... ..|+.+++
T Consensus       230 ~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            5789999999999986533 35655554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=1.3e-15  Score=125.74  Aligned_cols=203  Identities=16%  Similarity=0.053  Sum_probs=134.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      |++++|+||||++.||.+++++|+++|+  .|++..|+... .+.++.. ...+++++.+|++|.++++++++       
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~-~~~l~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK-ATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG-CHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHH-HHHHHHh-hCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            5578999999999999999999999994  68888887543 3333322 22569999999999988776542       


Q ss_pred             --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hc-----------CCceEEEEecCccCCC
Q psy4233          87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EM-----------GVEKFIHISALNADPN  140 (303)
Q Consensus        87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~-----------~~~~~v~~Ss~~~~~~  140 (303)
                        +.|++||+||....         +.....+++|+.++..+.+++.    +.           ...+++.+|+......
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              27999999996321         1234688999999998888763    11           1137788877655432


Q ss_pred             C--CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceee
Q psy4233         141 P--PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIK  211 (303)
Q Consensus       141 ~--~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (303)
                      .  ...+..+...|+.+|+....+.+..       ++.+..+.||.+-.+...           .              .
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-----------~--------------~  213 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------K--------------N  213 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-----------C--------------C
Confidence            1  1122233346999999999887653       689999999987533110           0              1


Q ss_pred             CceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcccC
Q psy4233         212 QPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRYL  246 (303)
Q Consensus       212 ~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s  246 (303)
                      ..++.++.|..++..+....  ..|+.|+ .+++++.
T Consensus       214 ~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~~  249 (250)
T d1yo6a1         214 AALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE  249 (250)
T ss_dssp             -----HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeCC
Confidence            23567888988888886532  3565444 3555543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.65  E-value=4e-15  Score=124.43  Aligned_cols=216  Identities=9%  Similarity=0.053  Sum_probs=137.4

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------c
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------K   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~   86 (303)
                      +++|++|||||+|  .||.+++++|+++|++|++..|+.........+........+..+|+++.+++.+++       .
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5689999999987  699999999999999999999974321111111122345778899999988777665       3


Q ss_pred             ccCEEEEccccCccc---------cchhhhh---hhcchHHHHHHHHHhc-CC-ceEEEEecCccCCCCCCCCCCCCCch
Q psy4233          87 YSNVVINLIGREFAT---------KNFTIAD---ANVEIPARLARLSKEM-GV-EKFIHISALNADPNPPTYYISGGSQF  152 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~---------~~~~~~~---~n~~~~~~l~~~~~~~-~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y  152 (303)
                      .+|++||+++.....         ....+..   .+..........+... +. ..++.+|+.+.....     .....|
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~-----~~~~~y  157 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----AHYNVM  157 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----TTCHHH
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-----ccchhh
Confidence            479999999863221         1111111   1222222333333222 11 246666666655421     234679


Q ss_pred             hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233         153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA  225 (303)
Q Consensus       153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  225 (303)
                      +.+|...+.+.+..       |+++..+.||.+..+...................|.        .-+...+|+|.++++
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL--------RKNVSLEEVGNAGMY  229 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--------SSCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc--------cCCcCHHHHHHHHHH
Confidence            99999999987763       689999999998876433221111111111112221        246899999999999


Q ss_pred             HhcCC--CCCCcEEEEeCCcc
Q psy4233         226 ACKDP--DAAGKIYQAVGPKR  244 (303)
Q Consensus       226 ~~~~~--~~~g~~~~i~~~~~  244 (303)
                      ++...  ...|+++.+.+|..
T Consensus       230 L~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhChhhCCCcCceEEECCChh
Confidence            99753  34899999988874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=2.3e-15  Score=123.38  Aligned_cols=202  Identities=12%  Similarity=0.052  Sum_probs=139.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc------cCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------SNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~D~vi   92 (303)
                      |+++||||++.||.+++++|+++|++|++.+|+...           .+...+++|+.+......+...      .+.++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccccccchh
Confidence            689999999999999999999999999999997532           2366788999987666655432      34555


Q ss_pred             EccccC------------ccccchhhhhhhcchHHHHHHHHHhc----------CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233          93 NLIGRE------------FATKNFTIADANVEIPARLARLSKEM----------GVEKFIHISALNADPNPPTYYISGGS  150 (303)
Q Consensus        93 ~~a~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~Ss~~~~~~~~~~~~~~~~  150 (303)
                      +.++..            ........+++|+.+...+.+.+...          +..++|++||...+..     .....
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-----~~~~~  145 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----QIGQA  145 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----CTTCH
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC-----CCCch
Confidence            554421            01123457788888888877765432          2248999999877532     12346


Q ss_pred             chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233         151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI  223 (303)
Q Consensus       151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  223 (303)
                      .|+.+|...+.+.+..       |+++..+.||.+..+...  ..............+..       .-+...+|+|+++
T Consensus       146 ~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~~-------~R~g~pedvA~~v  216 (241)
T d1uaya_         146 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ--GLPEKAKASLAAQVPFP-------PRLGRPEEYAALV  216 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--TSCHHHHHHHHTTCCSS-------CSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc--hhhhhHHHHHHhcCCCC-------CCCcCHHHHHHHH
Confidence            8999999999988763       689999999998754211  01111111112223321       1257899999999


Q ss_pred             HHHhcCCCCCCcEEEEeCCccc
Q psy4233         224 VAACKDPDAAGKIYQAVGPKRY  245 (303)
Q Consensus       224 ~~~~~~~~~~g~~~~i~~~~~~  245 (303)
                      +++++.....|+++.+.+|-.+
T Consensus       217 ~fL~s~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         217 LHILENPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHhCCCCCCCEEEECCcccC
Confidence            9999865568999999887543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=1.4e-15  Score=124.44  Aligned_cols=191  Identities=8%  Similarity=-0.017  Sum_probs=132.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-------hc--c
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-------IK--Y   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-------~~--~   87 (303)
                      ++|+|+||||+|.||.++++.|+++|++|.+++++..+...         ....+..|..+.++.+..       +.  +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------ASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------EEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---------ccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999999999999999886543221         234455565555444322       22  2


Q ss_pred             cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233          88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTK  156 (303)
Q Consensus        88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K  156 (303)
                      +|++||+||....         +..+..+++|+.++.++.+++...  +-.++|++||.......     .....|+.+|
T Consensus        72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-----~~~~~Y~asK  146 (236)
T d1dhra_          72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----PGMIGYGMAK  146 (236)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----TTBHHHHHHH
T ss_pred             ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc-----cCCcccHHHH
Confidence            7999999984211         123457889999988888877542  12489999999876431     2246899999


Q ss_pred             HHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233         157 YQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC  227 (303)
Q Consensus       157 ~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  227 (303)
                      ...+.+.+..         ++.+..+.||.+..|...       .   ....       .+. -.++..+++|+.+..++
T Consensus       147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-------~---~~~~-------~~~-~~~~~pe~va~~~~~l~  208 (236)
T d1dhra_         147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-------K---SMPE-------ADF-SSWTPLEFLVETFHDWI  208 (236)
T ss_dssp             HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-------H---HSTT-------SCG-GGSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-------h---hCcc-------chh-hcCCCHHHHHHHHHHHh
Confidence            9999988773         478888999988744110       0   1001       111 34688999999999998


Q ss_pred             cCCC--CCCcEEEE
Q psy4233         228 KDPD--AAGKIYQA  239 (303)
Q Consensus       228 ~~~~--~~g~~~~i  239 (303)
                      ....  ..|..+.+
T Consensus       209 s~~~~~i~G~~i~v  222 (236)
T d1dhra_         209 TGNKRPNSGSLIQV  222 (236)
T ss_dssp             TTTTCCCTTCEEEE
T ss_pred             CCCccCCCCCeEEE
Confidence            7532  36766665

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.63  E-value=5.2e-15  Score=124.30  Aligned_cols=213  Identities=14%  Similarity=0.090  Sum_probs=139.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCc-----------------eEEEecCCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQ-----------------VLFQPYHPRN   77 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~-----------------~~~~~~Dl~d   77 (303)
                      +..++||||++.||.++++.|+++|++|++..|+..+..+.+...   .....                 +....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            567899999999999999999999999999888765433222110   00112                 3345566888


Q ss_pred             HHHHHHHh-------cccCEEEEccccCcccc----------------------chhhhhhhcchHHHHHHHHHhc----
Q psy4233          78 DDEIRKAI-------KYSNVVINLIGREFATK----------------------NFTIADANVEIPARLARLSKEM----  124 (303)
Q Consensus        78 ~~~~~~~~-------~~~D~vi~~a~~~~~~~----------------------~~~~~~~n~~~~~~l~~~~~~~----  124 (303)
                      .+++++++       .++|++||+||......                      ....+.+|+.++..+.+++...    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            88777765       35899999999632211                      0125677888888887765331    


Q ss_pred             ------CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHH
Q psy4233         125 ------GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGH  191 (303)
Q Consensus       125 ------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~  191 (303)
                            +...++++++......     ......|+.+|...+.+.+..       |+++..+.||.+-.......    .
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~-----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~----~  232 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP----A  232 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCH----H
T ss_pred             HHHhcCCCCcccccccccccCC-----ccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCH----H
Confidence                  2236777777665432     123468999999999988763       68999999986432211111    1


Q ss_pred             HHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      ..+.....+|+.       .-+...+|+|+++++++...  ...|+++.+.+|..++
T Consensus       233 ~~~~~~~~~pl~-------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         233 VWEGHRSKVPLY-------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHHHTTCTTT-------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhcCCCC-------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            111122233321       12578999999999999643  2479999999987664

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.61  E-value=3.2e-15  Score=122.16  Aligned_cols=191  Identities=9%  Similarity=0.014  Sum_probs=128.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-------Hh--ccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-------AI--KYS   88 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-------~~--~~~   88 (303)
                      ..||+||||+|.||.+++++|+++|++|++++|+..+...         ....+.+|..+.+....       .+  .++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------SNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc---------ccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            4689999999999999999999999999999997643222         23445566655433332       22  237


Q ss_pred             CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233          89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKY  157 (303)
Q Consensus        89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~  157 (303)
                      |++||+||....         +..+..+++|+.++..+.+++...  +-.++|++||.......     .....|+.+|.
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKa  147 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----PSMIGYGMAKA  147 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----TTBHHHHHHHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc-----ccccchHHHHH
Confidence            999999985211         123356889999888888877542  12489999998776521     23468999999


Q ss_pred             HHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         158 QGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       158 ~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                      ..+.+.+..         ++.+..+.||.+-.|      .....+    ..       .+. ..++..+|+++.++..+.
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~------~~~~~~----~~-------~~~-~~~~~~~~va~~~~~~l~  209 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP------MNRKWM----PN-------ADH-SSWTPLSFISEHLLKWTT  209 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH------HHHHHS----TT-------CCG-GGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEEecCcCcCc------chhhhC----cC-------Ccc-ccCCCHHHHHHHHHHHhc
Confidence            999988763         346677888877532      111110    01       111 346889999999987665


Q ss_pred             CC---CCCCcEEEEe
Q psy4233         229 DP---DAAGKIYQAV  240 (303)
Q Consensus       229 ~~---~~~g~~~~i~  240 (303)
                      .+   ...|..+.+.
T Consensus       210 ~~~~~~~tG~~i~v~  224 (235)
T d1ooea_         210 ETSSRPSSGALLKIT  224 (235)
T ss_dssp             CGGGCCCTTCEEEEE
T ss_pred             CccccCCCceEEEEE
Confidence            43   2357666663

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.59  E-value=1.1e-13  Score=116.81  Aligned_cols=219  Identities=11%  Similarity=0.076  Sum_probs=139.6

Q ss_pred             ccCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCccc------------ccchhcCCC---CceEEEecCC-
Q psy4233          14 SSFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDV------------RDLRLCGDL---GQVLFQPYHP-   75 (303)
Q Consensus        14 ~~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------------~~~~~~~~~---~~~~~~~~Dl-   75 (303)
                      +++++|++|||||+|  .||.++++.|+++|.+|++..|++....            .........   .++..+..++ 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            456789999999987  7999999999999999999887532110            000000001   1122222222 


Q ss_pred             --------------------CCHHH----HHHHhcccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHH
Q psy4233          76 --------------------RNDDE----IRKAIKYSNVVINLIGREF----------ATKNFTIADANVEIPARLARLS  121 (303)
Q Consensus        76 --------------------~d~~~----~~~~~~~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~  121 (303)
                                          .+...    +.+.+.++|++||+||...          .+.....+++|+.+...+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                                12222    2233456899999998521          1223468889999999999888


Q ss_pred             HhcCC--ceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh--------hCCCEEEEeecceeeCCCchhhHHHH
Q psy4233         122 KEMGV--EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDKFLRYYGH  191 (303)
Q Consensus       122 ~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~~~~  191 (303)
                      .....  ..++.+++.+......    .....|..+|...+.+.+.        .++++..+.||.+..+..........
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~----~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~  239 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIP----GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT  239 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCT----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred             HHHhhcCCcceeeeehhhccccc----ccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHH
Confidence            65432  2556666655443211    2346799999888876653        37999999999998875543222222


Q ss_pred             HHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC--CCCCCcEEEEeCCcc
Q psy4233         192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD--PDAAGKIYQAVGPKR  244 (303)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~--~~~~g~~~~i~~~~~  244 (303)
                      ..+.....+|+        .-+...+|+|.++++++..  ....|+++.+.+|-.
T Consensus       240 ~~~~~~~~~Pl--------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         240 MIEYSYNNAPI--------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHSSS--------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCCCC--------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence            22222333443        2368899999999999964  334789999988753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.58  E-value=2.8e-14  Score=118.76  Aligned_cols=218  Identities=11%  Similarity=-0.056  Sum_probs=137.2

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233          16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------   86 (303)
Q Consensus        16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   86 (303)
                      +++|+++||||+|  .||.++++.|+++|++|++..|+..+..+.+... ...+...+++|+.+.+++..+++       
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~-~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR-LPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT-SSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH-cCCceeeEeeecccccccccccchhhhccc
Confidence            5789999999765  5999999999999999999998765433322221 12457889999999876655432       


Q ss_pred             ---ccCEEEEccccCccc-------------cchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCCC
Q psy4233          87 ---YSNVVINLIGREFAT-------------KNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISGG  149 (303)
Q Consensus        87 ---~~D~vi~~a~~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~  149 (303)
                         ..|+++|+++.....             .....+..|........+++.... ...++.++|.......     ...
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----p~~  157 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM-----PAY  157 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-----TTT
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC-----ccc
Confidence               269999999853110             111234445555555555554332 1244444444433321     223


Q ss_pred             CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCC--------c-h-hhHHHHHHHhhhcceeeecCCCceeeC
Q psy4233         150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGD--------K-F-LRYYGHMWRHVFRKLAVYKKGEETIKQ  212 (303)
Q Consensus       150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~--------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (303)
                      ..|+.+|...+.+.+..       ++++..+.||.+-.+..        . . ...............|+.       +.
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-------rr  230 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG-------WN  230 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC-------CC
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC-------CC
Confidence            67999999999988763       68999999998864311        0 0 011111111122223321       34


Q ss_pred             ceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233         213 PVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL  246 (303)
Q Consensus       213 ~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s  246 (303)
                      +...+|+|+++++++...  ...|+++.+.+|...+
T Consensus       231 ~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         231 MKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             TTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            688999999999999642  2378899998887544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.55  E-value=2.1e-13  Score=113.19  Aligned_cols=210  Identities=14%  Similarity=0.090  Sum_probs=132.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCC----HHHHHH-------Hh
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRN----DDEIRK-------AI   85 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d----~~~~~~-------~~   85 (303)
                      ..+||||++.||.+++++|+++|++|++.+|+..+..+.+..   .....+......|..+    .+.+.+       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999986544332111   0112346666666544    233333       33


Q ss_pred             cccCEEEEccccCcccc-------------------chhhhhhhcchHHHHHHHHHhc---------CCceEEEEecCcc
Q psy4233          86 KYSNVVINLIGREFATK-------------------NFTIADANVEIPARLARLSKEM---------GVEKFIHISALNA  137 (303)
Q Consensus        86 ~~~D~vi~~a~~~~~~~-------------------~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~  137 (303)
                      .++|++||+||......                   ....+..|..............         ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            45899999999632211                   1123344444444444433321         1225566666555


Q ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCcee
Q psy4233         138 DPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETI  210 (303)
Q Consensus       138 ~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (303)
                      ...     ......|+.+|...+.+.+..       |+++..+.||.+..+..........    ....+|+.       
T Consensus       163 ~~~-----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~----~~~~~pl~-------  226 (266)
T d1mxha_         163 DLP-----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEE----YRRKVPLG-------  226 (266)
T ss_dssp             GSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHH----HHTTCTTT-------
T ss_pred             ccc-----CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHH----HHhcCCCC-------
Confidence            432     123467999999999987763       6899999999987664433222221    22233321       


Q ss_pred             eCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233         211 KQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRY  245 (303)
Q Consensus       211 ~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~  245 (303)
                      +-+...+|+|+++++++....  ..|+++.+.+|-.+
T Consensus       227 r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         227 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            224789999999999997532  47999999888654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.4e-14  Score=118.29  Aligned_cols=193  Identities=10%  Similarity=-0.016  Sum_probs=133.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHh-------c
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAI-------K   86 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~-------~   86 (303)
                      +++++++||||++.||.+++++|+++|++|++++|+.....+....  ......+..+.+|..+.+.....+       .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999975433222111  112245888999999877666543       3


Q ss_pred             ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233          87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRT  155 (303)
Q Consensus        87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~  155 (303)
                      ..|++++++|....        +.....+++|+.++..+.+++..   .+-.++|++||...+..     ......|+.+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~-----~p~~~~Y~as  166 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----YPMVAAYSAS  166 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----CTTCHHHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-----CCCchHHHHH
Confidence            47999999986322        22346789999998888877632   11248999999877542     2334689999


Q ss_pred             HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233         156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA  226 (303)
Q Consensus       156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  226 (303)
                      |+..+.+.+..         ++.+..+.||.+-.+      ....    .....+       . ....+.+++|+.++..
T Consensus       167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~------~~~~----~~~~~~-------~-~~~~~~e~~a~~i~~~  228 (269)
T d1xu9a_         167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE------TAMK----AVSGIV-------H-MQAAPKEECALEIIKG  228 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH------HHHH----HSCGGG-------G-GGCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc------HHHH----hccCCc-------c-ccCCCHHHHHHHHHHH
Confidence            99999877653         367788999877532      1111    111111       1 2357789999999987


Q ss_pred             hcCCC
Q psy4233         227 CKDPD  231 (303)
Q Consensus       227 ~~~~~  231 (303)
                      +....
T Consensus       229 ~~~~~  233 (269)
T d1xu9a_         229 GALRQ  233 (269)
T ss_dssp             HHTTC
T ss_pred             hhcCC
Confidence            76543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-14  Score=121.12  Aligned_cols=186  Identities=12%  Similarity=-0.014  Sum_probs=129.0

Q ss_pred             CcEE-EEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233          18 GVVA-TVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y   87 (303)
Q Consensus        18 ~~~v-lVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   87 (303)
                      +|+| +||||++.||.+++++|+++ |++|++..|+.....+.... .....+++++.+|++|.++++++++       .
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4555 89999999999999999986 89999999986543222221 1123568999999999988776543       4


Q ss_pred             cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCC-----------------
Q psy4233          88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPN-----------------  140 (303)
Q Consensus        88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~-----------------  140 (303)
                      +|++||+||....        ......+++|+.++..+.+++-..  .-.++|++||......                 
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            8999999996322        123357889999999999988542  1148999999654210                 


Q ss_pred             -------------------CCCCCCCCCCchhHHHHHHHHHHHh-----------hCCCEEEEeecceeeCCCchhhHHH
Q psy4233         141 -------------------PPTYYISGGSQFYRTKYQGEKEVLR-----------EFPEATIFRPSDMYGSGDKFLRYYG  190 (303)
Q Consensus       141 -------------------~~~~~~~~~~~y~~~K~~~e~~~~~-----------~~~~~~ilrp~~~~G~~~~~~~~~~  190 (303)
                                         ....+..+...|+.+|.....+.+.           .++.+..+.||++-.+....     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~-----  236 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-----  236 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC-----
Confidence                               0011223446799999988765432           16888999999886442110     


Q ss_pred             HHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233         191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK  228 (303)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  228 (303)
                                          ....+.+|.|+.++.++.
T Consensus       237 --------------------~~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         237 --------------------KATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             --------------------TCSBCHHHHTHHHHHHHS
T ss_pred             --------------------cccCCHHHHHHHHHHHHc
Confidence                                113467899999888763

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.43  E-value=3.5e-12  Score=105.13  Aligned_cols=201  Identities=11%  Similarity=-0.068  Sum_probs=121.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh--------cccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI--------KYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~D   89 (303)
                      ||.|+||||++.||.+++++|+++|++|++++|+..+.                ..|+.+.+......        ...|
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            67899999999999999999999999999999975421                34566654444322        2389


Q ss_pred             EEEEccccCcc-ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCC-CCCC-------------------
Q psy4233          90 VVINLIGREFA-TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPN-PPTY-------------------  144 (303)
Q Consensus        90 ~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~-~~~~-------------------  144 (303)
                      +++++|+.... ........+|..+...+.+..    .+........+++.....- ....                   
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            99999986432 333345566776666665544    3333335555554433211 0000                   


Q ss_pred             ---CCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCc
Q psy4233         145 ---YISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQP  213 (303)
Q Consensus       145 ---~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  213 (303)
                         +......|+.+|...+.+.+..       |+++..+.||.+-.|.......-....+. .....|+        .-+
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl--------gR~  216 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM--------GRR  216 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST--------TSC
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC--------CCC
Confidence               0011235999999999988763       79999999999876532210000000000 0001111        125


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233         214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGP  242 (303)
Q Consensus       214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~  242 (303)
                      ...+|+|+++++++...  ...|+.+.+.+|
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            78999999999999643  347999999777

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.35  E-value=4.5e-11  Score=101.92  Aligned_cols=215  Identities=8%  Similarity=0.034  Sum_probs=132.6

Q ss_pred             CcEEEEEc--CCChhHHHHHHHHHhCCCeEEEeecCCCccccc------------chhc-CCCCceEEEec---------
Q psy4233          18 GVVATVFG--ASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD------------LRLC-GDLGQVLFQPY---------   73 (303)
Q Consensus        18 ~~~vlVtG--atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~------------~~~~-~~~~~~~~~~~---------   73 (303)
                      .+..||||  ++..||..++++|.++|.+|++..+........            .... ..........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  556999999999999999999877653211100            0000 00011223333         


Q ss_pred             -----------CCCCHHHHH-------HHhcccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHhc-
Q psy4233          74 -----------HPRNDDEIR-------KAIKYSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKEM-  124 (303)
Q Consensus        74 -----------Dl~d~~~~~-------~~~~~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~-  124 (303)
                                 |+.+.++++       +.+.+.|++||++|....          +.+...+++|+.++..+++++... 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       333332222       334568999999885221          233467788888888888877653 


Q ss_pred             -CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh--------hCCCEEEEeecceeeCCCc-----------
Q psy4233         125 -GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYGSGDK-----------  184 (303)
Q Consensus       125 -~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G~~~~-----------  184 (303)
                       .-.++|.+||.+.....   | .....|+.+|..++.+.+.        +++++..|.||.+--+...           
T Consensus       162 ~~~GsIv~iss~~~~~~~---p-~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVV---P-GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEEEEEEEECGGGTSCC---T-TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccccccccceeehhcccc---c-ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence             12489999887765421   1 1235789999999987764        3799999999977431100           


Q ss_pred             --------------------------------hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233         185 --------------------------------FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--  230 (303)
Q Consensus       185 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--  230 (303)
                                                      .......+.+...+.+|+        .-+...+|+|.++++++...  
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------~R~~~pedvA~~v~fLaSd~s~  309 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL--------RQKLLSTDIGSVASFLLSRESR  309 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSS--------CSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC--------CCCcCHHHHHHHHHHHhCchhC
Confidence                                            001111111112223332        23688999999999999742  


Q ss_pred             CCCCcEEEEeCCcc
Q psy4233         231 DAAGKIYQAVGPKR  244 (303)
Q Consensus       231 ~~~g~~~~i~~~~~  244 (303)
                      ...|+.+.+.+|..
T Consensus       310 ~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         310 AITGQTIYVDNGLN  323 (329)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CccCCeEEECCCcc
Confidence            34799999988854

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.27  E-value=1.6e-12  Score=102.27  Aligned_cols=85  Identities=16%  Similarity=0.111  Sum_probs=69.3

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .++++++|+||||+|.||..++++|+++|.+|+++.|+..+..+.........++....+|+.|.+++.+.+.++|+|||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            45789999999999999999999999999999999998644332222222223467788999999999999999999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      ++|..
T Consensus        99 ~Ag~g  103 (191)
T d1luaa1          99 AGAIG  103 (191)
T ss_dssp             CCCTT
T ss_pred             cCccc
Confidence            99863

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.67  E-value=5.1e-08  Score=71.13  Aligned_cols=94  Identities=20%  Similarity=0.260  Sum_probs=70.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~   97 (303)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++.++. ..+.....   .++.++.+|.+|++.+.++ ++++|+++-+...
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~-~~~~~~~~---~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD-ICKKASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChh-hhhhhhhh---hhhhhccCcccchhhhhhcChhhhhhhcccCCc
Confidence            79999998 99999999999999999999998753 22222221   2478999999999999987 5679999887543


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      .         +.|+    .+...++..+++++|
T Consensus        76 d---------~~N~----~~~~~~k~~~~~~iI   95 (132)
T d1lssa_          76 E---------EVNL----MSSLLAKSYGINKTI   95 (132)
T ss_dssp             H---------HHHH----HHHHHHHHTTCCCEE
T ss_pred             H---------HHHH----HHHHHHHHcCCceEE
Confidence            1         2233    345566778877776

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.61  E-value=1e-07  Score=70.28  Aligned_cols=111  Identities=18%  Similarity=0.117  Sum_probs=76.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ||.|+||+|.+|++++-.|..+|  .++.+++..+. ......+. +..-...... .....+..+.++++|+||.++|.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~-~~~a~Dl~-~~~~~~~~~~-~~~~~~~~~~~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLS-HIETRATVKG-YLGPEQLPDCLKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHT-TSSSSCEEEE-EESGGGHHHHHTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc-chhhHHHh-hhhhhcCCCe-EEcCCChHHHhCCCCEEEECCCc
Confidence            89999999999999999999888  46888876532 22111211 0000111111 12345566778999999999995


Q ss_pred             C--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          98 E--FATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        98 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      .  ....+.+..+.|....+.+++.+.+++.+-++.+.
T Consensus        79 ~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            3  33566788999999999999999999866444443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.55  E-value=3e-07  Score=67.78  Aligned_cols=110  Identities=24%  Similarity=0.248  Sum_probs=75.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcc-cccc----h-h-cCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYD-VRDL----R-L-CGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~-~~~~----~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |||.|+||+|.+|+.++..|+.++  .++.++++.+... .+..    . . ......++.....-.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            699999999999999999999998  5899988864221 1111    1 0 11112233322211233    3567899


Q ss_pred             EEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          90 VVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        90 ~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      +||-+||..  ....+.+....|....+.+++.+.+++.+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            999999963  2345667889999999999999998876565544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=4.6e-07  Score=66.74  Aligned_cols=102  Identities=13%  Similarity=0.083  Sum_probs=62.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |+||.|+||||++|+.+++.|+++.    .+++++.++.... .......    -.....++.+.+    .++++|++|.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g-~~~~~~~----~~~~~~~~~~~~----~~~~~DivF~   71 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ-AAPSFGG----TTGTLQDAFDLE----ALKALDIIVT   71 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS-BCCGGGT----CCCBCEETTCHH----HHHTCSEEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc-ccccccC----Cceeeecccchh----hhhcCcEEEE
Confidence            5799999999999999999988764    4677776553322 1111110    111122233433    3578999999


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT  143 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~  143 (303)
                      +++..              .++.+...+.++|. +++.++..+.|--.++
T Consensus        72 a~~~~--------------~s~~~~~~~~~~g~-~~~VID~Ss~fR~~~d  106 (146)
T d1t4ba1          72 CQGGD--------------YTNEIYPKLRESGW-QGYWIDAASSLRMKDD  106 (146)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTC-CCEEEECSSTTTTCTT
T ss_pred             ecCch--------------HHHHhhHHHHhcCC-CeecccCCcccccCCC
Confidence            98642              13356666777776 5555666666654433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=7e-07  Score=65.71  Aligned_cols=110  Identities=16%  Similarity=0.081  Sum_probs=72.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-C--CeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-G--SQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g--~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      |||.|+||+|.+|++++-.|..+ +  .++.+++..+........+.  ........+ ..-.+.    +.++++|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~~----~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDAT----PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCCH----HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCCc----cccCCCCEEEE
Confidence            79999999999999999887543 4  78888887532211111111  001112222 222233    25789999999


Q ss_pred             ccccC--ccccchhhhhhhcchHHHHHHHHHhcCCce-EEEEe
Q psy4233          94 LIGRE--FATKNFTIADANVEIPARLARLSKEMGVEK-FIHIS  133 (303)
Q Consensus        94 ~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  133 (303)
                      ++|..  ...+..+....|....+.+++.+.+++.+. ++.+|
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            99963  334667889999999999999999987654 44444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.42  E-value=5.7e-07  Score=66.35  Aligned_cols=110  Identities=15%  Similarity=0.151  Sum_probs=72.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchh---cCCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRL---CGDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      .+.|||.|+|+ |++|+.++..|+.+|  .++.++++.+..... ...+   ...........+|.   +    .++++|
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~ad   74 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDAD   74 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----Hhcccc
Confidence            35679999996 999999999999988  689999986532110 0000   00112234455553   2    357899


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      +||.++|...  .....+....|....+.+++.+.+++.+.++.+.
T Consensus        75 ivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivv  120 (146)
T d1ez4a1          75 LVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (146)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe
Confidence            9999998642  2455578888999999999999998876565544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.23  E-value=3.8e-06  Score=60.90  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=57.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~   97 (303)
                      |++.|+|+ |.+|+++++.|.++|++|++++.++. ..+.+..    .....+.+|.++++.+.++ +.++|+||-+.+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~-~~~~~~~----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEE-KVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHH-HHHHTTT----TCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHH-HHHHHHH----hCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence            46889986 99999999999999999999988643 3232222    3467788999999999887 6779998877654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.22  E-value=2.1e-06  Score=65.40  Aligned_cols=75  Identities=15%  Similarity=0.213  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      .++|+|.|| |++|+.+++.|.++||+|+++.|+...... +..  ..+.......+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~-l~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKK-LSA--GVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHH-HHT--TCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHH-HHh--cccccccccccccchhhhHhhhhccceeEeecc
Confidence            579999997 999999999999999999999998553322 221  123455566677777888888888999987754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.21  E-value=5.8e-07  Score=67.03  Aligned_cols=111  Identities=14%  Similarity=0.100  Sum_probs=73.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc-chh-----cCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD-LRL-----CGDLGQVLFQPYHPRNDDEIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~-~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (303)
                      .+.+||.|+|| |.+|+.++..|..++ .++++++.++...... ..+     ... ..... .    ...+.++.++++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~-~~~~~-~----~~~~~~~~~~~a   77 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSV-R----AEYSYEAALTGA   77 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCE-E----EECSHHHHHTTC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccC-CeeEE-e----ccCchhhhhcCC
Confidence            34679999997 999999998888877 5888888765321111 000     000 00111 1    112234567899


Q ss_pred             CEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          89 NVVINLIGREFA-------TKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        89 D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      |+|+.++|....       .........|....+.+++.+.+.+.+-++.+.
T Consensus        78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviiv  129 (154)
T d1pzga1          78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  129 (154)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEe
Confidence            999999986321       255678888999999999999998876555443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.16  E-value=7.8e-06  Score=59.66  Aligned_cols=104  Identities=13%  Similarity=0.070  Sum_probs=71.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccc--cchhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVR--DLRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~--~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      ||.|+||+|.+|+.++-.|+.++  .++.+++..... ...  ...+.   ..........+|.   +    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            89999999999999999999998  478887753221 111  11110   1123344444443   2    25789999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      +.+||..  ......+..+.|....+.+++...+.+.+-++
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~  115 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS  115 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence            9999963  22456678899999999999999998765444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.12  E-value=6.7e-07  Score=65.79  Aligned_cols=107  Identities=15%  Similarity=0.101  Sum_probs=72.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhcC----CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|| |.+|+.++..|+..+  .++.+++.++...... .....    .....++...  .|.+    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeEE
Confidence            69999997 999999999999988  6899998875432111 11100    0112233222  2332    46789999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      +.++|..  ...........|....+.+++.+.+++.+-++.+
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            9999963  3345567888899999999999998876544443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.10  E-value=1.2e-05  Score=59.29  Aligned_cols=107  Identities=16%  Similarity=0.204  Sum_probs=73.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc-ccchhc----CCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV-RDLRLC----GDLGQVLFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      .+.||.|+|| |++|+.++-.|+.++  .++.++++.+.... ....+.    .....+.+...|.       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            3569999997 999999999999988  47999888643211 000110    0112233434432       3467899


Q ss_pred             EEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          90 VVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        90 ~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      +||.++|...  ...+.+....|....+.+++.+.+++.+.++.
T Consensus        77 vvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~i  120 (148)
T d1ldna1          77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL  120 (148)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEE
T ss_pred             eEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEE
Confidence            9999999642  34556788889999999999999887654443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.04  E-value=1.2e-05  Score=58.61  Aligned_cols=106  Identities=15%  Similarity=0.113  Sum_probs=72.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cch---hcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLR---LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      |||.|+|| |.+|+.++..|+.++  .++.++++++..... ...   .............|   .    +.++++|+|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            79999997 999999999999887  588888876432111 001   00111233433333   2    2367899999


Q ss_pred             EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      .++|...  .....+....|....+.+++...+.+.+-++.+
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence            9998632  244557788899999999999999886655544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.02  E-value=2.7e-05  Score=57.88  Aligned_cols=112  Identities=12%  Similarity=0.055  Sum_probs=75.2

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc-ccch-----hcCCCCceEEEecCCCCHHHHHHH
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV-RDLR-----LCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      +......||.|+|+ |.+|+.++-.|+.+|  .++.+++++..... ....     .... .......+   |.+    .
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~-~~~~~~~~---d~~----~   85 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQ-TPKIVADK---DYS----V   85 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCC-CSEEEECS---SGG----G
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccC-CCeEEecc---chh----h
Confidence            34455679999996 999999999999998  48888887643221 1111     1111 11222222   232    3


Q ss_pred             hcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCce-EEEEe
Q psy4233          85 IKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEK-FIHIS  133 (303)
Q Consensus        85 ~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  133 (303)
                      ++++|+|+.+||..  ..+...+....|....+.++....+.+.+- ++.+|
T Consensus        86 ~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          86 TANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             GTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            67899999999964  234566788889999999999999987654 44443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.01  E-value=3.3e-06  Score=62.06  Aligned_cols=94  Identities=13%  Similarity=0.156  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ++|+|.|.||||++|+.+++.|.+++   .++..+..+... .+.+...  .+.......+-       ..+.++|+++.
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~~~--~~~~~~~~~~~-------~~~~~~d~vf~   70 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMGFA--ESSLRVGDVDS-------FDFSSVGLAFF   70 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEEET--TEEEECEEGGG-------CCGGGCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Ccceeec--cccchhccchh-------hhhccceEEEe
Confidence            36899999999999999999997654   467666543322 1211110  01121111111       12467999998


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL  135 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  135 (303)
                      +++..              .+..+...+.+.+. ++|=.|+.
T Consensus        71 a~p~~--------------~s~~~~~~~~~~g~-~VID~Ss~   97 (144)
T d2hjsa1          71 AAAAE--------------VSRAHAERARAAGC-SVIDLSGA   97 (144)
T ss_dssp             CSCHH--------------HHHHHHHHHHHTTC-EEEETTCT
T ss_pred             cCCcc--------------hhhhhccccccCCc-eEEeechh
Confidence            87532              12245556666665 66655544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.01  E-value=2.1e-05  Score=57.52  Aligned_cols=93  Identities=13%  Similarity=0.139  Sum_probs=53.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |||.|.||||++|+.+++.|+++.    .++..++.+... -+.....   .+. ....+..+.+    .++++|+||.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~-gk~~~~~---~~~-~~~~~~~~~~----~~~~~DvvF~a   71 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG-VPAPNFG---KDA-GMLHDAFDIE----SLKQLDAVITC   71 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS-SBCCCSS---SCC-CBCEETTCHH----HHTTCSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccc-ccccccC---Ccc-eeeecccchh----hhccccEEEEe
Confidence            689999999999999999998753    356655443221 1111111   011 1111222333    35789999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA  134 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss  134 (303)
                      ++..              .++.+...+.+.|.+ .+|=.|+
T Consensus        72 lp~~--------------~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          72 QGGS--------------YTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             SCHH--------------HHHHHHHHHHHTTCCSEEEESSS
T ss_pred             cCch--------------HHHHHhHHHHHcCCceEEEeCCc
Confidence            8642              123566777777763 3443343

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.00  E-value=4.3e-06  Score=61.20  Aligned_cols=104  Identities=13%  Similarity=0.185  Sum_probs=68.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc-ccchhc---CCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV-RDLRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +||.|+|| |.+|+.++-.|+.++  .++.++++...... ....+.   ...+......+   +.    +.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence            48999997 999999999999988  48999998754321 111111   11122322222   22    3467899999


Q ss_pred             EccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          93 NLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        93 ~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      .+||..  ...........|....+.+++.+.+++.+-++
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~  113 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVI  113 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceE
Confidence            999964  23455678889999999999999998765444

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=4.4e-05  Score=51.31  Aligned_cols=91  Identities=13%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..++++|+|.|. |-.|..+++.|.++|++|++.+.+.........    ...+.+..+.. +.+    .+.++|.||-.
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----~~~~~~~~~~~-~~~----~~~~~d~vi~S   71 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----PEAVERHTGSL-NDE----WLMAADLIVAS   71 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----CTTSCEEESBC-CHH----HHHHCSEEEEC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----hhccceeeccc-chh----hhccCCEEEEC
Confidence            467889999997 889999999999999999999886543322111    12345555543 222    34678999998


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      .|.....              .+++.|++.++ ++|
T Consensus        72 PGi~~~~--------------~~~~~a~~~gi-~ii   92 (93)
T d2jfga1          72 PGIALAH--------------PSLSAAADAGI-EIV   92 (93)
T ss_dssp             TTSCTTS--------------HHHHHHHHTTC-EEE
T ss_pred             CCCCCCC--------------HHHHHHHHcCC-CeE
Confidence            8874322              47888888887 443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=4.6e-05  Score=52.89  Aligned_cols=68  Identities=12%  Similarity=0.179  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEE
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVI   92 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi   92 (303)
                      ...||.|.|| |.+|+-++.+..+.|++|++++.++.......       .-+++.+|+.|.+.+.++..  ++|+|.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            4569999995 99999999999999999999998766544432       14678899999999998775  479984

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.98  E-value=2e-06  Score=65.27  Aligned_cols=113  Identities=12%  Similarity=0.050  Sum_probs=71.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcc-cccchhc---CCCCceEEEecCCCCHHHHHHHh
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYD-VRDLRLC---GDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~-~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      +..||.||||+|.||++++-.|++.+       .++..++...... ...+...   ...+....+..    .++..+.+
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~   98 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVF   98 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhc
Confidence            45689999999999999999998643       1444555433211 1211110   11112222211    12244678


Q ss_pred             cccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEe
Q psy4233          86 KYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGV--EKFIHIS  133 (303)
Q Consensus        86 ~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~S  133 (303)
                      +++|+||-++|..  ......+....|....+.+.+++.+...  -+++.+|
T Consensus        99 ~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            8999999999864  3356678889999999999999998532  2565555

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.94  E-value=7.9e-06  Score=60.73  Aligned_cols=113  Identities=14%  Similarity=0.084  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC----e-E--EEeecCC-Ccccccch---hcCCCCceEEEecCCCCHHHHHHHh
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS----Q-I--IIPYRGN-FYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~----~-V--~~~~R~~-~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      ++|||.|+||+|++|++++-.|...+.    + +  .++.-.. ........   ..........+...    +...+.+
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   78 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAF   78 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhc
Confidence            367999999999999999999998652    1 1  1111111 11111111   01111223233322    2234678


Q ss_pred             cccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233          86 KYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS  133 (303)
Q Consensus        86 ~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S  133 (303)
                      +++|+||.++|...  .....+....|....+.+.+.+.+.. .. .++.+|
T Consensus        79 ~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            89999999999642  24556788889999999999998853 22 444444

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.91  E-value=5e-05  Score=56.03  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=37.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD   55 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~   55 (303)
                      ++.+++||+|+||.|.+|+.+++.|.++||+|.+.+|+....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            456788999999999999999999999999999999976543

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.88  E-value=2.5e-06  Score=65.29  Aligned_cols=32  Identities=25%  Similarity=0.343  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEee
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPY   49 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~   49 (303)
                      |+||.|.||||++|+.+++.|.++. +++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            6899999999999999999999984 6776553

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.87  E-value=4.8e-05  Score=55.40  Aligned_cols=107  Identities=14%  Similarity=0.157  Sum_probs=72.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc---ch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD---LR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      .||.|+|+ |.+|++++-.|+.+|  .++.++++++......   +. .....+...+...+  +.+    .++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----ICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----HhhCCcEEE
Confidence            58999997 999999999999988  4899888765322110   00 00001223333222  222    357899999


Q ss_pred             EccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          93 NLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        93 ~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      .++|..  ......+....|....+.++..+.+++.+.++.+
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            999974  2355667888999999999999999886555443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.85  E-value=4e-05  Score=56.07  Aligned_cols=106  Identities=14%  Similarity=0.109  Sum_probs=69.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchhc----CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRLC----GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +||.|+|+ |.+|+.++-.|+.+|  .++.+++++...... ...+.    ...........|   .+    .++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~----~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA----ALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG----GGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HH----HhccccEE
Confidence            69999995 999999999999988  588888876432111 01110    011123333333   33    35789999


Q ss_pred             EEccccCc------cccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          92 INLIGREF------ATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        92 i~~a~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      |-+||...      .....+..+.|....+.+++.+++++.+-++.+
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv  120 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999532      123345677899999999999999876544433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.84  E-value=5.4e-06  Score=63.99  Aligned_cols=35  Identities=23%  Similarity=0.440  Sum_probs=32.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |||.|+||+|.+|+++++.|+++||+|++.+|++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            78999999999999999999999999999999754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.83  E-value=3.3e-05  Score=56.81  Aligned_cols=107  Identities=13%  Similarity=0.092  Sum_probs=70.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc-chh-----cCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD-LRL-----CGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~-~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      .+||.|+|+ |.+|+.++..|..++ .++.++++.+...... ..+     ... ....+...+  +.    +.++++|+
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~-~~~~v~~~~--~~----~~~~~adv   74 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY-SNCKVSGSN--TY----DDLAGADV   74 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT-CCCCEEEEC--CG----GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccC-CCcEEEecc--cc----cccCCCcE
Confidence            359999996 999999998887777 6888888865322111 000     000 112222221  22    34578999


Q ss_pred             EEEccccCcc-------ccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          91 VINLIGREFA-------TKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        91 vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      |+.++|....       .........|....+.+++.+++.+.+-++.+
T Consensus        75 vvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv  123 (150)
T d1t2da1          75 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV  123 (150)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            9999995321       13557788999999999999999887655443

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.82  E-value=2e-05  Score=59.55  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=44.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |+||.|.||||++|+.+++.|.++. .++..+..+............+.  .........+.+   ...+++|+|+.+.+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~--~~~~~~~~~~~~---~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST--LENSILSEFDPE---KVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG--CCCCBCBCCCHH---HHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchh--hccccccccCHh---HhccccceEEEccc
Confidence            6899999999999999999999876 56666644322211111010000  111112223444   34457999998876


Q ss_pred             c
Q psy4233          97 R   97 (303)
Q Consensus        97 ~   97 (303)
                      .
T Consensus        76 ~   76 (176)
T d1vkna1          76 A   76 (176)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.80  E-value=4.7e-06  Score=61.03  Aligned_cols=107  Identities=16%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccc-cchhcC----CCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVR-DLRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      +||.|+|+ |.+|+.++-.|..++ .++.+++..+..... ...+..    ......+...  .|.+    .++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEEE
Confidence            59999996 999999999998887 588888876543211 111100    0011122211  1222    356799999


Q ss_pred             EccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          93 NLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        93 ~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      -+||..  ......+....|....+.+++...+++.+-++.+
T Consensus        75 itag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          75 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             ECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            999964  2345556778899999999999999876655544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.80  E-value=6.8e-05  Score=53.48  Aligned_cols=69  Identities=20%  Similarity=0.335  Sum_probs=50.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      |||.|.|++|.+|+.|.+.+.++|+++.+..-...              .              ..+.++|+||....+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~--------------~--------------~~~~~~DVvIDFS~p~   52 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--------------V--------------EELDSPDVVIDFSSPE   52 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--------------E--------------EECSCCSEEEECSCGG
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc--------------H--------------HHhccCCEEEEecCHH
Confidence            68999999999999999999999998776432111              0              0124589999876442


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                                    ++..+++.|.++++ ++|
T Consensus        53 --------------~~~~~l~~~~~~~~-p~V   69 (128)
T d1vm6a3          53 --------------ALPKTVDLCKKYRA-GLV   69 (128)
T ss_dssp             --------------GHHHHHHHHHHHTC-EEE
T ss_pred             --------------HHHHHHHHHHhcCC-CEE
Confidence                          34468888888887 555

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.78  E-value=2.6e-06  Score=63.43  Aligned_cols=113  Identities=16%  Similarity=0.075  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-----C--eEEEeecCCCcc-cccchh---cCCCCceEEEecCCCCHHHHHHHh
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-----S--QIIIPYRGNFYD-VRDLRL---CGDLGQVLFQPYHPRNDDEIRKAI   85 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-----~--~V~~~~R~~~~~-~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~   85 (303)
                      ++|||.|+||+|.+|++++-.|++.+     .  +...++...... .+.+..   ....+....+..-    .+..+.+
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~   77 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT----DKEEIAF   77 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE----SCHHHHT
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC----ccccccc
Confidence            47899999999999999999998654     1  234443332211 111111   0111222222221    1133567


Q ss_pred             cccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhc-CCc-eEEEEe
Q psy4233          86 KYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEM-GVE-KFIHIS  133 (303)
Q Consensus        86 ~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~-~~v~~S  133 (303)
                      +++|+||-++|..  ......+....|....+.+.+...++ +-. .++.+|
T Consensus        78 ~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            8999999999964  23456678889999999999988764 432 344444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.77  E-value=6.1e-05  Score=54.81  Aligned_cols=108  Identities=18%  Similarity=0.076  Sum_probs=71.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchhc----CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRLC----GDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |||.|+|+ |.+|+.++-.|+.+|  .++.+++.++..... .+.+.    .......+...  .|.+    .++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH----HhccccEE
Confidence            79999996 999999999999888  578888876432111 00000    00011222222  1222    56789999


Q ss_pred             EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      |..+|..  ......+....|....+.+++.+++++.+.++.+-
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEe
Confidence            9999853  33455678888999999999999998765554443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=7.1e-05  Score=58.83  Aligned_cols=178  Identities=7%  Similarity=-0.016  Sum_probs=98.1

Q ss_pred             CCCcEEEEEc----------------CCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH
Q psy4233          16 FNGVVATVFG----------------ASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD   79 (303)
Q Consensus        16 ~~~~~vlVtG----------------atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   79 (303)
                      +.+++||||+                .||.+|.+|++++..+|++|++++-.......        +.+..+...  ..+
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p--------~~~~~~~~~--t~~   73 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTP--------PFVKRVDVM--TAL   73 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCC--------TTEEEEECC--SHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcc--------cccccceeh--hhH
Confidence            4567777775                58999999999999999999998775432111        235555543  333


Q ss_pred             H----HHHHhcccCEEEEccccCccccc-------------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC
Q psy4233          80 E----IRKAIKYSNVVINLIGREFATKN-------------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP  142 (303)
Q Consensus        80 ~----~~~~~~~~D~vi~~a~~~~~~~~-------------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~  142 (303)
                      +    +.+.++++|++|++|+..+....             .......+..+..+++...+...++.+.++-....+   
T Consensus        74 ~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaaEt~---  150 (223)
T d1u7za_          74 EMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETN---  150 (223)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEEESS---
T ss_pred             HHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCceEEEEeeccc---
Confidence            3    33455779999999997443110             011234455556677776554332222233222111   


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233         143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA  222 (303)
Q Consensus       143 ~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  222 (303)
                             +   ..+ .+.+-+...+.++++...-.--|.  .+..        ....+.++...........+=.++|+.
T Consensus       151 -------~---l~~-~A~~Kl~~K~~D~IvAN~v~~~~~--~fgs--------d~n~v~ii~~~~~~~~~~~sK~~iA~~  209 (223)
T d1u7za_         151 -------N---VEE-YARQKRIRKNLDLICANDVSQPTQ--GFNS--------DNNALHLFWQDGDKVLPLERKELLGQL  209 (223)
T ss_dssp             -------S---HHH-HHHHHHHHHTCSEEEEEECSSTTS--STTS--------SEEEEEEEETTEEEEEEEEEHHHHHHH
T ss_pred             -------c---hhh-HHHHHHHhcCCCEEEeecccCCCC--CcCC--------CceEEEEEECCCeEEcCCCCHHHHHHH
Confidence                   1   111 233345666899998764211011  1111        111233333222222455778899998


Q ss_pred             HHHHh
Q psy4233         223 IVAAC  227 (303)
Q Consensus       223 ~~~~~  227 (303)
                      ++..+
T Consensus       210 Il~~I  214 (223)
T d1u7za_         210 LLDEI  214 (223)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88755

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.75  E-value=1.6e-05  Score=60.68  Aligned_cols=106  Identities=17%  Similarity=0.142  Sum_probs=67.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEe-cCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-YHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      +.+|||+||+|-+|...++.....|.+|++++|++. ..+..+..+   -.+.+. -|....+.+.+...  ++|+||++
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~-~~~~~~~~G---a~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~  105 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE-KIAYLKQIG---FDAAFNYKTVNSLEEALKKASPDGYDCYFDN  105 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTT---CSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH-HHHHHHhhh---hhhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence            679999999999999999999999999999998743 333333322   122232 33333444444443  49999999


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT  143 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~  143 (303)
                      .|....              ...+++++..|  +++.++..+.++....
T Consensus       106 vG~~~~--------------~~~~~~l~~~G--~~v~~G~~~~~~~~~~  138 (182)
T d1v3va2         106 VGGEFL--------------NTVLSQMKDFG--KIAICGAISVYNRMDQ  138 (182)
T ss_dssp             SCHHHH--------------HHHGGGEEEEE--EEEECCCGGGTTCTTS
T ss_pred             cCchhh--------------hhhhhhccCCC--eEEeecceeecccccc
Confidence            874211              12334444333  7888777776654333

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=5.8e-05  Score=56.36  Aligned_cols=72  Identities=18%  Similarity=0.074  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCc-eEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ-VLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |||+|+|+ |.+|+.++..|.+.|++|++++|++............... ...+..  .+.+    .+..+|+||.+.-.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~D~iii~vka   73 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA--NDPD----FLATSDLLLVTLKA   73 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE--SCHH----HHHTCSEEEECSCG
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccccc--chhh----hhcccceEEEeecc
Confidence            79999998 9999999999999999999999986543322111111111 111222  2333    34579999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.71  E-value=3.4e-05  Score=59.90  Aligned_cols=78  Identities=18%  Similarity=0.228  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC---CCce-E-----EEecCCCCHHHHHHHhcccC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD---LGQV-L-----FQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~---~~~~-~-----~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |||.|.| .|++|..++..|.++|++|++++.+.. ..+.+..-..   .+.. +     .....+.-..++.++++++|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~-~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSST-KIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH-HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHH-HHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            7899997 599999999999999999999987532 2221110000   0000 0     00000111233455677899


Q ss_pred             EEEEccccC
Q psy4233          90 VVINLIGRE   98 (303)
Q Consensus        90 ~vi~~a~~~   98 (303)
                      +++.|.+.+
T Consensus        79 ~i~i~VpTP   87 (202)
T d1mv8a2          79 VSFICVGTP   87 (202)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEecCcc
Confidence            999999864

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.70  E-value=0.00012  Score=50.96  Aligned_cols=95  Identities=8%  Similarity=0.097  Sum_probs=66.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+++++|+|+|+ |.+|..-++.|++.|.+|++++.........+   ....+++++...+.+.+     +.+++.|+.+
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~---~~~~~i~~~~~~~~~~d-----l~~~~lv~~a   79 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVW---ANEGMLTLVEGPFDETL-----LDSCWLAIAA   79 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHH---HTTTSCEEEESSCCGGG-----GTTCSEEEEC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHH---HhcCCceeeccCCCHHH-----hCCCcEEeec
Confidence            356889999996 99999999999999999999877654332222   22356888887775433     5678888866


Q ss_pred             cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      .+..         +    -...+.+.|++.++  +|++.
T Consensus        80 t~d~---------~----~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          80 TDDD---------T----VNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             CSCH---------H----HHHHHHHHHHHTTC--EEEET
T ss_pred             CCCH---------H----HHHHHHHHHHHcCC--EEEeC
Confidence            5431         1    12258888888876  66654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=4.9e-05  Score=56.36  Aligned_cols=107  Identities=15%  Similarity=0.067  Sum_probs=71.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc-ccchh-----cCCCCceEEEecCCCCHHHHHHHhc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV-RDLRL-----CGDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      .++..||.|+|+ |.+|+.++-.|+.+|  .++.+++++..... ....+     ... ........|   .+    .++
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~-~~~~~~~~d---~~----~~~   86 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLS-TPKIVFGKD---YN----VSA   86 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCS-CCEEEEESS---GG----GGT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcC-CCeEEeccc---hh----hhc
Confidence            355669999996 999999999999998  48999887643211 11111     111 112222223   32    357


Q ss_pred             ccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          87 YSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        87 ~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      ++|+||.++|..  ......+..+.|....+.++..+++++.+-++
T Consensus        87 ~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~iv  132 (159)
T d2ldxa1          87 NSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKI  132 (159)
T ss_dssp             TEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEE
T ss_pred             cccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence            899999999863  23455577888999999999988888765444

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.68  E-value=2e-05  Score=60.20  Aligned_cols=35  Identities=29%  Similarity=0.346  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeec
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYR   50 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R   50 (303)
                      .++.||.|.||||++|+.+++.|.++. .++..+..
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            456799999999999999999999986 56665543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.67  E-value=1.2e-05  Score=59.96  Aligned_cols=74  Identities=24%  Similarity=0.263  Sum_probs=54.6

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+++++|||+|+ |-+|+.+++.|...|. ++++..|+...........+    .+     ..+.+++.+.+.++|+||.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~----~~-----~~~~~~~~~~l~~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GE-----AVRFDELVDHLARSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CE-----ECCGGGHHHHHHTCSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh----cc-----cccchhHHHHhccCCEEEE
Confidence            356889999997 9999999999999996 68888887443332222211    22     2345677888899999999


Q ss_pred             ccccC
Q psy4233          94 LIGRE   98 (303)
Q Consensus        94 ~a~~~   98 (303)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            98864

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.62  E-value=2.7e-05  Score=58.34  Aligned_cols=66  Identities=15%  Similarity=0.114  Sum_probs=44.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.|+|+ |.+|+.+++.|.++|++|++.+|++.. .+.....+.   +....   .+.    +.++++|+||-+..
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~-~~~a~~~~~---~~~~~---~~~----~~~~~~DiIilavp   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQST-CEKAVERQL---VDEAG---QDL----SLLQTAKIIFLCTP   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTS---CSEEE---SCG----GGGTTCSEEEECSC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchH-HHHHHHhhc---cceee---eec----ccccccccccccCc
Confidence            78999985 999999999999999999999987432 222222110   11111   111    35678999987653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=7.8e-05  Score=56.14  Aligned_cols=73  Identities=16%  Similarity=0.061  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +.+|+|+||+|-+|+..+..+...|.+|+++++++. ..+..+..+    +..+ .|..+.....+...++|+||++.|
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~-~~~~~~~lG----a~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE-KLALPLALG----AEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG-GSHHHHHTT----CSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCEEEEEeccccchhhhhhhhccccccccccccccc-ccccccccc----ccee-eehhhhhhhhhccccccccccccc
Confidence            568999999999999999999999999999998743 333333322    2111 133343333344566999999877

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=9.7e-05  Score=55.56  Aligned_cols=108  Identities=12%  Similarity=0.026  Sum_probs=64.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ..++++|+|.|| |..+++++-+|.+.|.+|+++.|+.....+..........++.+  ++.+.     ...++|+||++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~   86 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINA   86 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeecc
Confidence            456889999997 88999999999999999999999765433332222222223332  22221     12458999999


Q ss_pred             cccCcccc-----------chhhhhhhcch-HHHHHHHHHhcCCceEE
Q psy4233          95 IGREFATK-----------NFTIADANVEI-PARLARLSKEMGVEKFI  130 (303)
Q Consensus        95 a~~~~~~~-----------~~~~~~~n~~~-~~~l~~~~~~~~~~~~v  130 (303)
                      ........           ....+++.+.. .-.+++.|++.|.+.++
T Consensus        87 Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~i  134 (170)
T d1nyta1          87 TSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNA  134 (170)
T ss_dssp             CSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEE
T ss_pred             cccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCccc
Confidence            86421110           11223443332 12577777777754333

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.46  E-value=0.00036  Score=51.83  Aligned_cols=36  Identities=19%  Similarity=0.086  Sum_probs=32.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      |++|.++| .|.+|+.+++.|+++||+|++.+|+...
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~   36 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA   36 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhh
Confidence            57999998 6999999999999999999999997543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.43  E-value=9.3e-05  Score=56.15  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC----CCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD----LGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .|||.|+|| |.+|..++..|.++||+|++++|++.. .+.....+.    .+..+..........+..+.++++|+||.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR-IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            379999997 999999999999999999999997432 222211110    01111122211122345678889999999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus        79 ~v~~   82 (184)
T d1bg6a2          79 VVPA   82 (184)
T ss_dssp             CSCG
T ss_pred             EEch
Confidence            8643

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00021  Score=53.80  Aligned_cols=95  Identities=19%  Similarity=0.195  Sum_probs=61.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH---HHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE---IRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~--~~D~vi   92 (303)
                      +.+|||+||+|.+|...++.+...|.+|+++++++ +..+..+..+   -.+++  |.++.+.   +.+...  ++|+||
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~-~~~~~~~~~G---a~~vi--~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTE-EGQKIVLQNG---AHEVF--NHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHTT---CSEEE--ETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCEEEEEeccccccccccccccccCcccccccccc-cccccccccC---ccccc--ccccccHHHHhhhhhccCCceEEe
Confidence            56999999999999999999999999999999864 3333333322   12333  4444433   333333  389999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA  134 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  134 (303)
                      ++.|...              ....++.++..|  ++|.++.
T Consensus       103 d~~g~~~--------------~~~~~~~l~~~G--~iv~~G~  128 (174)
T d1yb5a2         103 EMLANVN--------------LSKDLSLLSHGG--RVIVVGS  128 (174)
T ss_dssp             ESCHHHH--------------HHHHHHHEEEEE--EEEECCC
T ss_pred             ecccHHH--------------HHHHHhccCCCC--EEEEEec
Confidence            9987421              113455555443  7887753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00024  Score=52.20  Aligned_cols=75  Identities=15%  Similarity=0.138  Sum_probs=57.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .|+|+|. |-+|+.+++.|.++|++|+++...+.......... ...++.++.||.+|++.+.++ ++++|+||-+..
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~-~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-LGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHh-hcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            6899997 99999999999999999999988654322222111 124699999999999998875 456999988864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.35  E-value=0.00016  Score=53.23  Aligned_cols=65  Identities=15%  Similarity=0.223  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.|+| .|.+|+.+++.|+++|++|++..|.+.........     ++...       ++..++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-----~~~~~-------~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-----TVGVT-------ETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-----HHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-----ccccc-------ccHHHHHhhcCeEEEEec
Confidence            6899998 59999999999999999999988765443222111     11111       123456788999998875

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.35  E-value=7e-05  Score=55.37  Aligned_cols=24  Identities=25%  Similarity=0.407  Sum_probs=22.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGS   43 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~   43 (303)
                      ||.|+||||++|+++++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            899999999999999999988854

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00031  Score=53.25  Aligned_cols=82  Identities=12%  Similarity=0.161  Sum_probs=60.1

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      ..++++|+|.|+ |..|++++.+|.+.|. +++++.|+.........+   ....-.......|+.+.+.+...+.++|.
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            456889999997 8899999999999984 688888875433221111   11111244556788899999999999999


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9999864

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.30  E-value=0.00026  Score=53.65  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=50.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchhcCCCCc--eEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRLCGDLGQ--VLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      |||.|.|| |-.|.+++..|.++|++|++..|..+. ..+.+......+.  ...-..++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            79999996 999999999999999999999885332 1111111100000  1111111223566788899999999876


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      ..
T Consensus        80 ps   81 (180)
T d1txga2          80 ST   81 (180)
T ss_dssp             CG
T ss_pred             ch
Confidence            53

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.30  E-value=8.8e-05  Score=55.26  Aligned_cols=66  Identities=17%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      |||.|+| .|.+|+.+++.|+++||+|++.+|++.. .+.+...    +...       .++..++.+++|+||-|...
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~-~~~~~~~----~~~~-------~~~~~e~~~~~d~ii~~v~~   66 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEA-IADVIAA----GAET-------ASTAKAIAEQCDVIITMLPN   66 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT----TCEE-------CSSHHHHHHHCSEEEECCSS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcch-hHHHHHh----hhhh-------cccHHHHHhCCCeEEEEcCC
Confidence            6899998 5999999999999999999999997543 2332221    1211       12344567789999988753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.26  E-value=0.0001  Score=54.26  Aligned_cols=66  Identities=17%  Similarity=0.114  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.+.| +|.+|+++++.|++.|+++++..|+.....+..+..+    +..       ..+..++++++|+||-+.-
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g----~~~-------~~~~~~~~~~~dvIilavk   66 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA----LPY-------AMSHQDLIDQVDLVILGIK   66 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT----CCB-------CSSHHHHHHTCSEEEECSC
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc----eee-------echhhhhhhccceeeeecc
Confidence            6899998 5999999999999999999999887443222112211    111       1234556778999997763

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=2.9e-05  Score=59.74  Aligned_cols=111  Identities=13%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----------hcCCCCc-------eEEEecCCCCH
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----------LCGDLGQ-------VLFQPYHPRND   78 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----------~~~~~~~-------~~~~~~Dl~d~   78 (303)
                      |+-+||.|+|| |.+|+.++..++..|++|+++++++........          ..+....       ..-....+.-.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            34579999997 999999999999999999999997643211100          0000000       00000001111


Q ss_pred             HHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        79 ~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      .++.++++++|.||-++...            +..-+.+++...+.-.+..++.|+++...
T Consensus        81 ~d~~~a~~~ad~ViEav~E~------------l~~K~~v~~~l~~~~~~~~ilasnTS~l~  129 (192)
T d1f0ya2          81 TDAASVVHSTDLVVEAIVEN------------LKVKNELFKRLDKFAAEHTIFASNTSSLQ  129 (192)
T ss_dssp             SCHHHHTTSCSEEEECCCSC------------HHHHHHHHHHHTTTSCTTCEEEECCSSSC
T ss_pred             chhHhhhcccceehhhcccc------------hhHHHHHHHHHhhhcccCceeeccCcccc
Confidence            23455677899999987542            22333567666665545677777776654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00016  Score=53.69  Aligned_cols=93  Identities=16%  Similarity=0.112  Sum_probs=55.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEe-ecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIP-YRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .+||+|.|++|.+|+.+++.+.+. +.++.+. +|........ .. ..+..+.-..+.-      ++...++.+|+||.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~------~~~~~~~~~DViID   77 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQS------SLDAVKDDFDVFID   77 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEES------CSTTTTTSCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeec------cHHHHhcccceEEE
Confidence            579999999999999999999886 4665544 4433221111 00 0000000111122      23345667999998


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      ...+              .++...++.|.+.++ .+|.
T Consensus        78 Fs~p--------------~~~~~~~~~a~~~~~-~~Vi  100 (162)
T d1diha1          78 FTRP--------------EGTLNHLAFCRQHGK-GMVI  100 (162)
T ss_dssp             CSCH--------------HHHHHHHHHHHHTTC-EEEE
T ss_pred             eccH--------------HHHHHHHHHHHhccc-eeEE
Confidence            8643              234467888888887 5553

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00016  Score=46.39  Aligned_cols=37  Identities=30%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      ..++|+|+||+|-+|...+..+...|.+|++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            3568999999999999999999999999999999753

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.21  E-value=0.00027  Score=53.49  Aligned_cols=99  Identities=20%  Similarity=0.195  Sum_probs=62.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~--~~D~vi   92 (303)
                      +.+|||+||+|.+|...++.+...|.+|+++++++. ..+.++..+   -.+.+  |..+.   +.+.+...  ++|++|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~-~~~~l~~~G---a~~vi--~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA-KREMLSRLG---VEYVG--DSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH-HHHHHHTTC---CSEEE--ETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccc-ccccccccc---ccccc--cCCccCHHHHHHHHhCCCCEEEEE
Confidence            569999999999999999999999999999998643 333333322   12333  33333   34444433  499999


Q ss_pred             EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      ++.|...              ....++.++..|  ++|.++.....
T Consensus       100 d~~g~~~--------------~~~~~~~l~~~G--~~v~~G~~~~~  129 (183)
T d1pqwa_         100 NSLAGEA--------------IQRGVQILAPGG--RFIELGKKDVY  129 (183)
T ss_dssp             ECCCTHH--------------HHHHHHTEEEEE--EEEECSCGGGT
T ss_pred             ecccchH--------------HHHHHHHhcCCC--EEEEEccCCCC
Confidence            9987321              112344444433  78877655443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.15  E-value=5.2e-05  Score=58.13  Aligned_cols=78  Identities=21%  Similarity=0.195  Sum_probs=50.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC----CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      |.|+||.|.|| |-.|.+++..|.++|++|++..|++. ..+.+....    .++++++ .-++.-..++.++++++|+|
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~-~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEE-EVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHH-HHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHH-HHHHHhhccccccccccccc-ccccccchhhhhccCCCCEE
Confidence            45678999996 99999999999999999999998643 222111110    0122211 11122234467788999999


Q ss_pred             EEccc
Q psy4233          92 INLIG   96 (303)
Q Consensus        92 i~~a~   96 (303)
                      |.+..
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            88764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.14  E-value=0.00036  Score=52.34  Aligned_cols=75  Identities=13%  Similarity=0.043  Sum_probs=50.7

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...+++|+|.|+ |..+++++.+|.+.+.+|+++.|+................+..+..|-.       .+..+|.||++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeec
Confidence            356789999996 8889999999998888999999985443322222222223444443321       23569999999


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      ...
T Consensus        87 tp~   89 (171)
T d1p77a1          87 TSA   89 (171)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.11  E-value=0.00027  Score=53.29  Aligned_cols=101  Identities=15%  Similarity=0.069  Sum_probs=60.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a   95 (303)
                      +.+|||+||+|-+|+..++.+...|.+|++.++++.+ .+..+..+   -.+.+.-+-.+ ++......  ++|+||++.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-~~~~~~lG---a~~vi~~~~~~-~~~~~~~~~~gvD~vid~v  106 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-HDYLRVLG---AKEVLAREDVM-AERIRPLDKQRWAAAVDPV  106 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-HHHHHHTT---CSEEEECC----------CCSCCEEEEEECS
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-HHHHHhcc---cceeeecchhH-HHHHHHhhccCcCEEEEcC
Confidence            5689999999999999999999999999999987543 33333322   12233222111 22222222  489999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      |.....              ..++.++..|  +++.++..+...
T Consensus       107 gg~~~~--------------~~l~~l~~~G--riv~~G~~~g~~  134 (176)
T d1xa0a2         107 GGRTLA--------------TVLSRMRYGG--AVAVSGLTGGAE  134 (176)
T ss_dssp             TTTTHH--------------HHHHTEEEEE--EEEECSCCSSSC
T ss_pred             CchhHH--------------HHHHHhCCCc--eEEEeecccCcc
Confidence            753211              2344444433  788777665443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.00  E-value=0.00028  Score=52.19  Aligned_cols=97  Identities=16%  Similarity=0.076  Sum_probs=69.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ..+.+|+|.|| |-.|..-++.+...|.+|++++.+.... +.+.... ...++..   ..+.+.+.+.++++|+||.++
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l-~~l~~~~-~~~~~~~---~~~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLF-GSRVELL---YSNSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH-GGGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH-HHHHHhh-cccceee---hhhhhhHHHhhccCcEEEEee
Confidence            45779999997 9999999999999999999999975433 2222111 0123333   357788999999999999999


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMG  125 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  125 (303)
                      -.+....|...       ++..++.++.-.
T Consensus       104 lipG~~aP~lI-------t~~mv~~Mk~GS  126 (168)
T d1pjca1         104 LVPGRRAPILV-------PASLVEQMRTGS  126 (168)
T ss_dssp             CCTTSSCCCCB-------CHHHHTTSCTTC
T ss_pred             ecCCcccCeee-------cHHHHhhcCCCc
Confidence            87666665444       345666666543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.00058  Score=51.42  Aligned_cols=74  Identities=16%  Similarity=0.177  Sum_probs=51.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HHHHHHhcc--cCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DEIRKAIKY--SNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~--~D~vi   92 (303)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++.+ .+..+..+   --+++  |..+.   +.+.++-.+  +|+|+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k-~~~~~~lG---a~~vi--~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-AQSALKAG---AWQVI--NYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHT---CSEEE--ETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHH-HHHHHhcC---CeEEE--ECCCCCHHHHHHHHhCCCCeEEEE
Confidence            5699999999999999999999999999999998543 33333332   12333  44443   334444333  89999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .+.+.
T Consensus       103 d~~g~  107 (179)
T d1qora2         103 DSVGR  107 (179)
T ss_dssp             ECSCG
T ss_pred             eCccH
Confidence            99875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.97  E-value=0.00073  Score=50.38  Aligned_cols=75  Identities=15%  Similarity=0.078  Sum_probs=50.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +.+|+|+|+ |.+|...+..+...|.+|+++++++. ..+..+..+   --+++... .+.+..+....++|+++.+.+.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~-k~~~a~~lG---a~~~i~~~-~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSR-KREDAMKMG---ADHYIATL-EEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSST-THHHHHHHT---CSEEEEGG-GTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchh-HHHHhhccC---CcEEeecc-chHHHHHhhhcccceEEEEecC
Confidence            679999997 99999999888889999999999754 333333322   11233221 2333344555569999999775


Q ss_pred             C
Q psy4233          98 E   98 (303)
Q Consensus        98 ~   98 (303)
                      .
T Consensus       102 ~  102 (168)
T d1piwa2         102 L  102 (168)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.94  E-value=0.0039  Score=40.82  Aligned_cols=85  Identities=13%  Similarity=-0.033  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      .|||.++|-.|-==+.|++.|.++|++|.+-++......+.+...    ++.+..+.  +++.    ++++|.||...+.
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~----Gi~i~~gh--~~~~----i~~~d~vV~SsAI   70 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKL----GIPIFVPH--SADN----WYDPDLVIKTPAV   70 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT----TCCEESSC--CTTS----CCCCSEEEECTTC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHC----CCeEEeee--cccc----cCCCCEEEEecCc
Confidence            378999987554444789999999999999998865555555443    46665552  3332    3579999998887


Q ss_pred             CccccchhhhhhhcchHHHHHHHHHhcCC
Q psy4233          98 EFATKNFTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      ... +             --+++|++.|+
T Consensus        71 ~~~-n-------------pel~~A~~~gI   85 (89)
T d1j6ua1          71 RDD-N-------------PEIVRARMERV   85 (89)
T ss_dssp             CTT-C-------------HHHHHHHHTTC
T ss_pred             CCC-C-------------HHHHHHHHcCC
Confidence            533 2             24677777776

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.90  E-value=0.0025  Score=45.06  Aligned_cols=92  Identities=16%  Similarity=0.139  Sum_probs=61.2

Q ss_pred             CCCcEEEEEcCC---ChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233          16 FNGVVATVFGAS---GYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGat---G~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   91 (303)
                      +++++|.|+|||   +..|..+++.|.+.| ++|+.+..... .....+          ..-++.|..      ..+|.+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~-~i~G~~----------~y~sl~dlp------~~vDlv   68 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE-EVQGVK----------AYKSVKDIP------DEIDLA   68 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS-EETTEE----------CBSSTTSCS------SCCSEE
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcc-ccCCeE----------eecchhhcC------CCCceE
Confidence            467899999999   999999999998766 78988765432 122111          112233321      348988


Q ss_pred             EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      +-+....              .+..+++.+.+.|++.++.+|+....
T Consensus        69 vi~vp~~--------------~~~~~~~~~~~~g~~~~vi~s~Gf~e  101 (129)
T d2csua1          69 IIVVPKR--------------FVKDTLIQCGEKGVKGVVIITAGFGE  101 (129)
T ss_dssp             EECSCHH--------------HHHHHHHHHHHHTCCEEEECCCSSTT
T ss_pred             EEecChH--------------HhHHHHHHHHHcCCCEEEEecccccc
Confidence            8776431              23367888888899888888765443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.0058  Score=43.40  Aligned_cols=71  Identities=13%  Similarity=0.161  Sum_probs=48.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE   98 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~   98 (303)
                      ||.|+|++|.+|+.+++.+.+. ++++.+..-...                       +.+.+  ...++|+||....+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-----------------------~~~~~--~~~~~DvvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-----------------------PLSLL--TDGNTEVVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-----------------------CTHHH--HTTTCSEEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-----------------------chhhh--ccccCCEEEEcccHH
Confidence            7999999999999999998775 477665432111                       11111  124589999886542


Q ss_pred             ccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          99 FATKNFTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                                    .+...++.|.+.++ ++|
T Consensus        56 --------------~~~~~~~~~~~~~~-~~V   72 (135)
T d1yl7a1          56 --------------VVMGNLEFLIDNGI-HAV   72 (135)
T ss_dssp             --------------THHHHHHHHHHTTC-EEE
T ss_pred             --------------HHHHHHHHHHhcCC-CEE
Confidence                          34468888888887 554

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.83  E-value=0.001  Score=49.64  Aligned_cols=67  Identities=12%  Similarity=0.157  Sum_probs=42.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      |+++||.|.| +|.+|+..++.|.+. +.+++++.....+....         .....     ..+......++|+|+.+
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~D~Vvi~   65 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK---------TPVFD-----VADVDKHADDVDVLFLC   65 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS---------SCEEE-----GGGGGGTTTTCSEEEEC
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccccc---------ccccc-----chhhhhhccccceEEEe
Confidence            5578999999 599999999999986 47777665543332221         11111     11223344568988887


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      .+.
T Consensus        66 tp~   68 (170)
T d1f06a1          66 MGS   68 (170)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.78  E-value=0.0017  Score=48.26  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~   53 (303)
                      |++|+|+| .|.+|..+++.|.+.|+  +|++.+|+..
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            56899998 59999999999999985  7888888743

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.73  E-value=0.0019  Score=48.59  Aligned_cols=63  Identities=17%  Similarity=0.206  Sum_probs=49.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      +.+++|+|.|. |-||+.+++.|..-|.+|++.+|...+...                  .-.++++++++.+|+|+.+.
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------------------~~~~~l~ell~~sDiv~~~~  100 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPW------------------RFTNSLEEALREARAAVCAL  100 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSS------------------CCBSCSHHHHTTCSEEEECC
T ss_pred             ccCceEEEecc-ccccccceeeeeccccccccccccccccce------------------eeeechhhhhhccchhhccc
Confidence            67889999995 999999999999999999999987542111                  11124678899999999776


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      ..
T Consensus       101 pl  102 (181)
T d1qp8a1         101 PL  102 (181)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.69  E-value=0.00067  Score=51.07  Aligned_cols=76  Identities=13%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.|+| .|.+|..+++.|+++||+|.+.+|++....+..+............. ..+.+.+...+...+.++-+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   77 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILVQ   77 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECCC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhh-hhhhhHHHHhcccceEEEEeec
Confidence            6899999 69999999999999999999999875433222121111111111111 2355666666677777666543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0013  Score=48.99  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=52.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      +.+|+|.|+ |-+|...+..+...|.+++++++++. ..+..+..+   -.++  .|..+.+......+++|++|.+.|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~-~~~~a~~lG---ad~~--i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEA-KREAAKALG---ADEV--VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHT---CSEE--EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchh-HHHHHhccC---CcEE--EECchhhHHHHhcCCCceeeeeeec
Confidence            679999996 88999999999989999998888654 333333322   1222  3556666666666789999999875

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.61  E-value=0.014  Score=38.71  Aligned_cols=72  Identities=17%  Similarity=0.022  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      ..++|.+.|-.|--=+.|++.|.++|++|.+-++......+.+..    .++.+..++-  ++    .++++|.||...+
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----~Gi~v~~g~~--~~----~i~~~d~vV~S~A   76 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ----AGAKIYIGHA--EE----HIEGASVVVVSSA   76 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----TTCEEEESCC--GG----GGTTCSEEEECTT
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----CCCeEEECCc--cc----cCCCCCEEEECCC
Confidence            367899998644333778999999999999999875544444433    3466666543  32    2357899998887


Q ss_pred             cC
Q psy4233          97 RE   98 (303)
Q Consensus        97 ~~   98 (303)
                      ..
T Consensus        77 I~   78 (96)
T d1p3da1          77 IK   78 (96)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.55  E-value=0.0039  Score=46.15  Aligned_cols=96  Identities=19%  Similarity=0.270  Sum_probs=59.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC--CCHHHHHHHhc-----ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDEIRKAIK-----YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~-----~~D~   90 (303)
                      +.+|+|+| +|.+|...+..+...|.+|+++++++.+ .+..+..+   --..+..|-  .+...+.+.++     ++|+
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r-~~~a~~~g---a~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR-LEVAKNCG---ADVTLVVDPAKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTT---CSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHH-HHHHHHcC---CcEEEeccccccccchhhhhhhcccccCCce
Confidence            56899998 6999999999999999999999886432 23222222   112223222  34444444332     3899


Q ss_pred             EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233          91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS  133 (303)
Q Consensus        91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  133 (303)
                      ||.++|...             .....++.++..|  ++++++
T Consensus       102 vid~~g~~~-------------~~~~a~~~~~~~G--~iv~~G  129 (170)
T d1e3ja2         102 TIDCSGNEK-------------CITIGINITRTGG--TLMLVG  129 (170)
T ss_dssp             EEECSCCHH-------------HHHHHHHHSCTTC--EEEECS
T ss_pred             eeecCCChH-------------HHHHHHHHHhcCC--ceEEEe
Confidence            999987531             1113455555544  688766

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.54  E-value=0.00023  Score=53.20  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=33.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      +..|||+||+|-+|...++.....|.+|++++++..+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA   60 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH
Confidence            4479999999999999999999999999999997543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.52  E-value=0.002  Score=44.67  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=32.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            579999997 99999999999999999999998753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.51  E-value=0.0021  Score=44.71  Aligned_cols=34  Identities=29%  Similarity=0.431  Sum_probs=31.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++|+|.|| |++|.+++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            579999997 9999999999999999999999975

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.50  E-value=0.0022  Score=48.10  Aligned_cols=80  Identities=16%  Similarity=0.087  Sum_probs=46.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccc-ccchhcCCC-----Cce-EEEecCCCCHHHHHHHhcccC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDV-RDLRLCGDL-----GQV-LFQPYHPRNDDEIRKAIKYSN   89 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~-----~~~-~~~~~Dl~d~~~~~~~~~~~D   89 (303)
                      |-||.|-| .|.||+.++|++.+++ .+|+++....+... ..+......     .+. .+-...+.....+...+.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            46899999 7999999999999875 78888755432211 111111100     000 000011111223445566799


Q ss_pred             EEEEccccC
Q psy4233          90 VVINLIGRE   98 (303)
Q Consensus        90 ~vi~~a~~~   98 (303)
                      +||.|.|..
T Consensus        80 iViecTG~f   88 (178)
T d1b7go1          80 IVVDTTPNG   88 (178)
T ss_dssp             EEEECCSTT
T ss_pred             EEEECCCCc
Confidence            999999864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0035  Score=39.84  Aligned_cols=36  Identities=17%  Similarity=0.015  Sum_probs=32.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ||+|.|.|+ |.+|+-++.+..+.|++|.+++-.+..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            579999996 999999999999999999999876543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.45  E-value=0.0025  Score=44.57  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=32.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .++++|.|| |++|.+++..|.+.|.+|+++.|++.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            579999997 99999999999999999999999754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.00052  Score=51.74  Aligned_cols=36  Identities=31%  Similarity=0.200  Sum_probs=32.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      .+|||+||+|-+|...++.+...|.+|++++|++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            489999999999999999999999999999997544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.40  E-value=0.0029  Score=47.84  Aligned_cols=103  Identities=17%  Similarity=0.081  Sum_probs=54.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEE-eecCCCcccccchhcCCCCceEEEecCCCCHHH-HHHHhc-ccCEEEEcc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIII-PYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE-IRKAIK-YSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~-~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~-~~D~vi~~a   95 (303)
                      .+|||+||+|-+|+..++.+...|.++++ .+++..+........   .-..++...-.+..+ +.+... ++|+||++.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~v  108 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAAVNYKTGNVAEQLREACPGGVDVYFDNV  108 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEEEETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEEeeccchhHHHHHHHHhccCceEEEecC
Confidence            57999999999999999999989976554 444432222211111   123344443333333 333332 499999998


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN  140 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  140 (303)
                      |...              ....++.++..  .+++.++..+.+..
T Consensus       109 Gg~~--------------~~~~~~~l~~~--G~iv~~G~~s~~~~  137 (187)
T d1vj1a2         109 GGDI--------------SNTVISQMNEN--SHIILCGQISQYNK  137 (187)
T ss_dssp             CHHH--------------HHHHHTTEEEE--EEEEEC--------
T ss_pred             Cchh--------------HHHHhhhcccc--ccEEEecccccccc
Confidence            7421              11233333333  37888877666543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.39  E-value=0.0049  Score=46.04  Aligned_cols=75  Identities=16%  Similarity=0.097  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR   97 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~   97 (303)
                      ..+|.++| .|.+|..+++.|+++||+|++++|++... +.+.........  ..+ ....+++.+.+..+|.++-+...
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~-~~l~~~~~~~~~--~~~-a~~~~~~~~~~~~~~~ii~~~~~   76 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKV-DDFLANEAKGTK--VLG-AHSLEEMVSKLKKPRRIILLVKA   76 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHH-HHHHHTTTTTSS--CEE-CSSHHHHHHHBCSSCEEEECSCT
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHhcccccc--ccc-hhhhhhhhhhhcccceEEEecCc
Confidence            45899999 59999999999999999999999986433 222211110000  011 34677788888889999887643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.37  E-value=0.0021  Score=49.13  Aligned_cols=68  Identities=15%  Similarity=0.141  Sum_probs=49.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      .++.+++|.|.| .|.||+.+++.|..-|.+|++.++........       .        ....+++.++++.+|+|+.
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-------~--------~~~~~~l~~~l~~sDii~~  102 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-------K--------GYYVDSLDDLYKQADVISL  102 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-------T--------TCBCSCHHHHHHHCSEEEE
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-------c--------eeeeccccccccccccccc
Confidence            346789999999 59999999999999999999988764321111       0        1123457778888998886


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus       103 ~~pl  106 (197)
T d1j4aa1         103 HVPD  106 (197)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            6653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.35  E-value=0.0026  Score=48.36  Aligned_cols=70  Identities=13%  Similarity=0.075  Sum_probs=49.7

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ....+++|.|.| .|-||+.+++.|..-|.+|++.++..........             ++...++++++++.+|+|+.
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------------~~~~~~~l~~ll~~sD~i~~  110 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL-------------GLQRVSTLQDLLFHSDCVTL  110 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH-------------TCEECSSHHHHHHHCSEEEE
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhh-------------ccccccchhhccccCCEEEE
Confidence            346789999999 5999999999999999999999886543221110             01123356677888888876


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus       111 ~~pl  114 (193)
T d1mx3a1         111 HCGL  114 (193)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            5543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.31  E-value=0.0053  Score=46.06  Aligned_cols=75  Identities=17%  Similarity=0.194  Sum_probs=48.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH----Hhc--ccCE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK----AIK--YSNV   90 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~----~~~--~~D~   90 (303)
                      +.+|||+|| |-+|...+..+...|. +|+++++++. ..+..+..+   --+++...-.+..+..+    ...  ++|+
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~-~~~~a~~lG---a~~vi~~~~~~~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN-RLKLAEEIG---ADLTLNRRETSVEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH-HHHHHHHTT---CSEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccc-ccccccccc---ceEEEeccccchHHHHHHHHHhhCCCCceE
Confidence            579999997 9999999999999996 7999888643 333323222   12333333234333322    222  3899


Q ss_pred             EEEcccc
Q psy4233          91 VINLIGR   97 (303)
Q Consensus        91 vi~~a~~   97 (303)
                      ||.+.|.
T Consensus       104 vid~vG~  110 (182)
T d1vj0a2         104 ILEATGD  110 (182)
T ss_dssp             EEECSSC
T ss_pred             EeecCCc
Confidence            9999875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.31  E-value=0.0037  Score=43.75  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=31.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4679999996 9999999999999999999998875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.003  Score=44.16  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=32.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +++++|+|| |++|.+++..|.+.|.+|+++.|++.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            579999997 99999999999999999999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0031  Score=43.65  Aligned_cols=35  Identities=23%  Similarity=0.234  Sum_probs=31.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            579999997 99999999999999999999999753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.28  E-value=0.0034  Score=43.66  Aligned_cols=36  Identities=19%  Similarity=0.178  Sum_probs=32.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .+++++|+|| |+||..++..|.+.|.+|+++.|+..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3679999997 99999999999999999999998754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.28  E-value=0.0031  Score=48.24  Aligned_cols=67  Identities=13%  Similarity=0.123  Sum_probs=49.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ....+++|.|.| .|.||+.+++.|..-|.+|++.++........        .+        +..+++++++.+|+|+.
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--------~~--------~~~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP--------DF--------DYVSLEDLFKQSDVIDL  103 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT--------TC--------EECCHHHHHHHCSEEEE
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccchhhhc--------ch--------hHHHHHHHHHhccccee
Confidence            346688999999 59999999999999999999998865432111        11        22346778888998886


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      +...
T Consensus       104 ~~pl  107 (199)
T d1dxya1         104 HVPG  107 (199)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            6543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.26  E-value=0.00051  Score=52.21  Aligned_cols=108  Identities=15%  Similarity=0.098  Sum_probs=63.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH------------Hh
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK------------AI   85 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~------------~~   85 (303)
                      -+||.|+|| |.+|+.++..++..|++|+++++++............. -.+.+.-..........            .+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~-l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL-LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHH-HHHHHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhh-HHhhhcccccchhhhhhhhceeecccccccc
Confidence            468999997 99999999999999999999999754322111100000 00000000112222221            13


Q ss_pred             cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          86 KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        86 ~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      .++|.||-++...            +..-+.++....+.-.+..|+.|+++...
T Consensus        82 ~~adlViEav~E~------------l~~K~~lf~~l~~~~~~~~IiaSnTS~l~  123 (186)
T d1wdka3          82 GNVDLVVEAVVEN------------PKVKQAVLAEVENHVREDAILASNTSTIS  123 (186)
T ss_dssp             GGCSEEEECCCSC------------HHHHHHHHHHHHTTSCTTCEEEECCSSSC
T ss_pred             cccceeeeeecch------------HHHHHHHHHHHHhhcCCCeeEEecccccc
Confidence            4678898876542            33334677777766555677777776654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.012  Score=43.55  Aligned_cols=75  Identities=20%  Similarity=0.247  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----ccCEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----YSNVV   91 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D~v   91 (303)
                      +.+|+|.|+ |.+|...+..+...|. +|++.++++. ..+..+..+   --+++..+-.+.....+.+.     ++|+|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~-rl~~a~~~G---a~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT-RLSKAKEIG---ADLVLQISKESPQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH-HHHHHHHTT---CSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH-HHHHHHHhC---CcccccccccccccccccccccCCCCceEE
Confidence            458999986 9999999999999997 7888887643 333222221   13444455456555554432     48999


Q ss_pred             EEcccc
Q psy4233          92 INLIGR   97 (303)
Q Consensus        92 i~~a~~   97 (303)
                      |.+.|.
T Consensus       102 id~~G~  107 (171)
T d1pl8a2         102 IECTGA  107 (171)
T ss_dssp             EECSCC
T ss_pred             EeccCC
Confidence            999885

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.17  E-value=0.0043  Score=43.74  Aligned_cols=69  Identities=14%  Similarity=0.127  Sum_probs=51.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG   96 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~   96 (303)
                      .|+|+|. |-+|+.+++.|.  +++|.++..++.. .+....    .++.++.||.+|++.+.++ +.+++.+|-+..
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~-~~~~~~----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENV-RKKVLR----SGANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTH-HHHHHH----TTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHH-HHHHHh----cCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            5788885 999999999984  5567777775432 222222    4689999999999999875 456999987654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.17  E-value=0.0069  Score=45.05  Aligned_cols=76  Identities=16%  Similarity=0.108  Sum_probs=47.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhcc-cCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIKY-SNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~-~D~vi~~a   95 (303)
                      +.+|+|.|+ |.+|...+..+...|.+++.+....+...+..+..+   -.+++..+-.|. +.+.++..+ +|+||.+.
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~G---a~~~i~~~~~~~~~~i~~~t~gg~D~vid~~  104 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG---ATHVINSKTQDPVAAIKEITDGGVNFALEST  104 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT---CSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcC---CeEEEeCCCcCHHHHHHHHcCCCCcEEEEcC
Confidence            568999997 999999999998889766555443344434333332   234444433332 333333333 89999998


Q ss_pred             cc
Q psy4233          96 GR   97 (303)
Q Consensus        96 ~~   97 (303)
                      |.
T Consensus       105 G~  106 (174)
T d1f8fa2         105 GS  106 (174)
T ss_dssp             CC
T ss_pred             Cc
Confidence            85

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.17  E-value=0.0052  Score=45.83  Aligned_cols=97  Identities=12%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecC---------------------
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH---------------------   74 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~D---------------------   74 (303)
                      +.+-+|+|.|| |-.|..-++.....|.+|.+++.+.... +.++...    ..++..+                     
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~-~~l~~l~----~~~i~~~~~~~~~~~~~~gyA~~~s~~~  100 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK-EQVESLG----GKFITVDDEAMKTAETAGGYAKEMGEEF  100 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH-HHHHHTT----CEECCC----------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH-HHHHHhh----cceEEEeccccccccccccchhhcCHHH
Confidence            34669999997 9999999999999999999999875433 2222211    1121111                     


Q ss_pred             -CCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcC
Q psy4233          75 -PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG  125 (303)
Q Consensus        75 -l~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  125 (303)
                       ....+.+.+.++++|+||-.+-......|...       ++.+++.++.-.
T Consensus       101 ~~~~~~~l~~~l~~aDlVI~talipG~~aP~li-------t~~mv~~Mk~GS  145 (183)
T d1l7da1         101 RKKQAEAVLKELVKTDIAITTALIPGKPAPVLI-------TEEMVTKMKPGS  145 (183)
T ss_dssp             -CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCS-------CHHHHTTSCTTC
T ss_pred             HHHHHHHHHHHHHhhhhheeeeecCCcccceee-------hHHHHHhcCCCc
Confidence             12245677778899999999877655555433       335666666543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0041  Score=43.63  Aligned_cols=34  Identities=24%  Similarity=0.366  Sum_probs=31.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++++|+|| |++|..++..|.+.|.+|+++.|++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            579999997 9999999999999999999999975

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.0062  Score=46.03  Aligned_cols=66  Identities=15%  Similarity=0.134  Sum_probs=48.9

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ....++|+|.| .|.||+.+++.|..-|.+|+..++........         .       ...++++++++.+|+|+.+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~---------~-------~~~~~l~ell~~sDii~i~  103 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGN---------A-------TQVQHLSDLLNMSDVVSLH  103 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTT---------C-------EECSCHHHHHHHCSEEEEC
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhh---------h-------hhhhhHHHHHhhccceeec
Confidence            45688999998 69999999999999999999998864322111         1       1113567788889998877


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      ...
T Consensus       104 ~pl  106 (188)
T d1sc6a1         104 VPE  106 (188)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.12  E-value=0.0036  Score=43.22  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=31.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++++|.|| |++|.+++..|.+.|.+|+++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            579999997 9999999999999999999998875

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.05  E-value=0.00099  Score=50.67  Aligned_cols=38  Identities=16%  Similarity=-0.002  Sum_probs=31.9

Q ss_pred             CcEEEE-EcCCChhHHHHHHHHHhCCCeEEEeecCCCcc
Q psy4233          18 GVVATV-FGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD   55 (303)
Q Consensus        18 ~~~vlV-tGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~   55 (303)
                      +.+++| +||+|-+|...++.....|.+|++++|+..+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~   67 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL   67 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence            346677 59999999999999999999999999876543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.98  E-value=0.0046  Score=43.16  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            358999997 9999999999999999999998864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.96  E-value=0.0071  Score=44.69  Aligned_cols=76  Identities=20%  Similarity=0.153  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhc--ccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIK--YSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~D~vi~   93 (303)
                      +.+|+|+|++|-+|...+..+...| .+|++.++++ +..+..+..+   -.+.+..+-.|. +.+.+...  ++|++|.
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~-~~~~~~~~~G---a~~~i~~~~~~~~~~~~~~~~~~~~d~vid  103 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE-EAVEAAKRAG---ADYVINASMQDPLAEIRRITESKGVDAVID  103 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH-HHHHHHHHHT---CSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccch-hhHHHHHHcC---CceeeccCCcCHHHHHHHHhhcccchhhhc
Confidence            5689999999999999999999988 5788887763 3333333222   123444433332 22333322  3899999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      ++|.
T Consensus       104 ~~g~  107 (170)
T d1jvba2         104 LNNS  107 (170)
T ss_dssp             SCCC
T ss_pred             cccc
Confidence            9875

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.95  E-value=0.0018  Score=44.23  Aligned_cols=40  Identities=18%  Similarity=0.023  Sum_probs=32.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ....+++|+|+|+ |.-|..++.+|.+..-+|+...|+...
T Consensus        28 ~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~~   67 (107)
T d2gv8a2          28 ELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGGG   67 (107)
T ss_dssp             GGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred             hhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence            4467999999995 999999999999887777666666543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.014  Score=42.71  Aligned_cols=59  Identities=24%  Similarity=0.310  Sum_probs=47.3

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...+++|+|.|-+..+|..++..|.++|..|+.......                       +   +.+..+++|+||.+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------~---l~~~~~~ADivI~a   87 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------N---LRHHVENADLLIVA   87 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------C---HHHHHHHCSEEEEC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------h---hHHHHhhhhHhhhh
Confidence            357899999999999999999999999999988754321                       1   33455779999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      +|...
T Consensus        88 ~G~p~   92 (166)
T d1b0aa1          88 VGKPG   92 (166)
T ss_dssp             SCCTT
T ss_pred             ccCcc
Confidence            98643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.93  E-value=0.006  Score=43.29  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=32.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .++|+|+|| |++|.+++..|.+.|.+|+++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            679999996 99999999999999999999998754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.92  E-value=0.00088  Score=50.09  Aligned_cols=105  Identities=17%  Similarity=0.085  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhHHH--HHHHHHhC----CCeEEEeecCCCccccc-------chhcCCCCceEEEecCCCCHHHHHHH
Q psy4233          18 GVVATVFGASGYMGSY--LCNKLGKQ----GSQIIIPYRGNFYDVRD-------LRLCGDLGQVLFQPYHPRNDDEIRKA   84 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~--l~~~Ll~~----g~~V~~~~R~~~~~~~~-------~~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (303)
                      .|||.|+|| |.+|..  ++..|+..    +.++.+++.++......       .....  ...++..     ..+..++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~--~~~~i~~-----~td~~ea   73 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG--ADLKFEK-----TMNLDDV   73 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTT--CCCEEEE-----ESCHHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcC--CCeEEEE-----eCChhhc
Confidence            479999997 988875  33444432    35899998874322110       00111  1122222     2335568


Q ss_pred             hcccCEEEEccccCccccc----------------------------hhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233          85 IKYSNVVINLIGREFATKN----------------------------FTIADANVEIPARLARLSKEMGVEKFI  130 (303)
Q Consensus        85 ~~~~D~vi~~a~~~~~~~~----------------------------~~~~~~n~~~~~~l~~~~~~~~~~~~v  130 (303)
                      ++++|+|+..++.......                            ......|+...+.+++..++...+.++
T Consensus        74 L~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~  147 (171)
T d1obba1          74 IIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY  147 (171)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             ccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEE
Confidence            8999999999875211100                            001123667778888888887765443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.88  E-value=0.015  Score=43.03  Aligned_cols=76  Identities=11%  Similarity=0.118  Sum_probs=46.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecC-CCcccccchhcCCCCceEEEecCCC-----------CHHHHHHH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPR-----------NDDEIRKA   84 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----------d~~~~~~~   84 (303)
                      ++||.|-| .|.||+.+++++++++ .+++++.-. +......+...    +...+..+..           ....+..+
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL----GIPVYAASEEFIPRFEKEGFEVAGTLNDL   76 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT----TCCEEESSGGGHHHHHHHTCCCSCBHHHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc----CceeecccccceeeecccCccccchhhhh
Confidence            57999999 5999999999999865 677776543 22222222111    1222222211           12234445


Q ss_pred             hcccCEEEEccccC
Q psy4233          85 IKYSNVVINLIGRE   98 (303)
Q Consensus        85 ~~~~D~vi~~a~~~   98 (303)
                      +.++|+||-|.|..
T Consensus        77 ~~~vDvViEcTG~f   90 (172)
T d2czca2          77 LEKVDIIVDATPGG   90 (172)
T ss_dssp             HTTCSEEEECCSTT
T ss_pred             hccCCEEEECCCCC
Confidence            66899999999874

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.87  E-value=0.0048  Score=43.06  Aligned_cols=33  Identities=21%  Similarity=0.213  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      +++++|+|| |+||.+++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            568999997 999999999999999999999875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.85  E-value=0.029  Score=41.33  Aligned_cols=83  Identities=19%  Similarity=0.133  Sum_probs=55.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC--CCHHHHHHHhcccCEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDEIRKAIKYSNVV   91 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~~~D~v   91 (303)
                      .+..+++++|+|-+.-+|..++..|+++|..|+...............   ..-......|+  ...+.+++....+|+|
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lk~~~~~aDIv  101 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGES---LKLNKHHVEDLGEYSEDLLKKCSLDSDVV  101 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCC---SSCCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccc---eeeeeeccccccccchhHHhhccccCCEE
Confidence            367899999999999999999999999999998776542211111000   00001111111  3567788888899999


Q ss_pred             EEccccCc
Q psy4233          92 INLIGREF   99 (303)
Q Consensus        92 i~~a~~~~   99 (303)
                      |..+|...
T Consensus       102 IsavG~p~  109 (171)
T d1edza1         102 ITGVPSEN  109 (171)
T ss_dssp             EECCCCTT
T ss_pred             EEccCCCc
Confidence            99998754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.83  E-value=0.0059  Score=48.22  Aligned_cols=36  Identities=17%  Similarity=0.072  Sum_probs=32.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ++.+||+|+|| |..|..++..|.++|++|+++.|++
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999997 9999999999999999999999864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.80  E-value=0.0098  Score=44.97  Aligned_cols=69  Identities=10%  Similarity=0.054  Sum_probs=48.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ...++++.|.|. |.||+.+++.+..-|.+|.+.++............            ....++++++++.+|+|+.+
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~------------~~~~~~l~~ll~~sD~v~l~  110 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ------------ATFHDSLDSLLSVSQFFSLN  110 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT------------CEECSSHHHHHHHCSEEEEC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc------------ccccCCHHHHHhhCCeEEec
Confidence            456889999995 99999999999999999999887644322211110            11224567788888988755


Q ss_pred             cc
Q psy4233          95 IG   96 (303)
Q Consensus        95 a~   96 (303)
                      ..
T Consensus       111 ~p  112 (191)
T d1gdha1         111 AP  112 (191)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.80  E-value=0.0069  Score=43.26  Aligned_cols=84  Identities=11%  Similarity=0.002  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          17 NGVVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        17 ~~~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      +.++|+|+||+   +..|..+++.|++.||+|+.+.... ......+          ..-   +   +.++-..+|.++-
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~-~~i~G~~----------~~~---s---l~dlp~~iD~v~i   80 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY-EEVLGRK----------CYP---S---VLDIPDKIEVVDL   80 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-SEETTEE----------CBS---S---GGGCSSCCSEEEE
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc-cccCCCc----------ccc---c---ccccCccceEEEE
Confidence            36799999998   7899999999999999998875432 2111111          111   1   2222234888877


Q ss_pred             ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      +....              ....+++.+.+.|++.+++
T Consensus        81 ~vp~~--------------~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          81 FVKPK--------------LTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             CSCHH--------------HHHHHHHHHHHHTCSEEEE
T ss_pred             EeCHH--------------HHHHHHHHHHHhCCCEEEE
Confidence            75432              2336778788888866554

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0041  Score=45.53  Aligned_cols=70  Identities=20%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.++++.|+| .|.||+.+++.|...|.+|++....+....+.. .    .+.        ....+++++...|++|-+
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~----dG~--------~v~~~~~a~~~adivvta   86 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-M----EGY--------EVTTMDEACQEGNIFVTT   86 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H----TTC--------EECCHHHHTTTCSEEEEC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-c----Cce--------EeeehhhhhhhccEEEec
Confidence            46788999999 799999999999999999999988754322211 0    111        222366778889999998


Q ss_pred             cccC
Q psy4233          95 IGRE   98 (303)
Q Consensus        95 a~~~   98 (303)
                      .|..
T Consensus        87 TGn~   90 (163)
T d1li4a1          87 TGCI   90 (163)
T ss_dssp             SSCS
T ss_pred             CCCc
Confidence            8854

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.75  E-value=0.0083  Score=45.11  Aligned_cols=68  Identities=9%  Similarity=0.083  Sum_probs=48.1

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN   93 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   93 (303)
                      ....++++.|.| .|.||+.+++.+..-|.+|++.++..........      .+        ...+++++++.+|+|+.
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~------~~--------~~~~l~ell~~sDiv~~  104 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL------GI--------ELLSLDDLLARADFISV  104 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH------TC--------EECCHHHHHHHCSEEEE
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc------Cc--------eeccHHHHHhhCCEEEE
Confidence            345688999999 5999999999999999999999886443211110      11        12346678888998886


Q ss_pred             ccc
Q psy4233          94 LIG   96 (303)
Q Consensus        94 ~a~   96 (303)
                      +..
T Consensus       105 ~~P  107 (184)
T d1ygya1         105 HLP  107 (184)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.71  E-value=0.023  Score=42.01  Aligned_cols=76  Identities=11%  Similarity=0.024  Sum_probs=46.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcc-cccchhcCCCCceEEEecC-----------CCCHHHHHHH
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYH-----------PRNDDEIRKA   84 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~D-----------l~d~~~~~~~   84 (303)
                      |++|.|-| .|.||+.++|++.+++ .+|+++.-..+.. ...+...    +......+           +.-...+..+
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~v~g~~~~~   75 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK----GYDLYVAIPERVKLFEKAGIEVAGTVDDM   75 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT----TCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc----CCceEecccccceeecccCcccCCChhHh
Confidence            67999998 7999999999998876 6777765432221 1111111    11111111           1111234455


Q ss_pred             hcccCEEEEccccC
Q psy4233          85 IKYSNVVINLIGRE   98 (303)
Q Consensus        85 ~~~~D~vi~~a~~~   98 (303)
                      +.++|+||-|.|..
T Consensus        76 ~~~vDvViEcTG~f   89 (171)
T d1cf2o1          76 LDEADIVIDCTPEG   89 (171)
T ss_dssp             HHTCSEEEECCSTT
T ss_pred             hcCCCEEEEccCCC
Confidence            67899999999874

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.71  E-value=0.015  Score=40.03  Aligned_cols=82  Identities=17%  Similarity=0.260  Sum_probs=52.3

Q ss_pred             cEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          19 VVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        19 ~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      ++|.|+||+   +..|..+++.|++.||+|+.+..+. +.....+                -..++.++=..+|.++-+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~-~~i~G~~----------------~y~sl~~lp~~~D~vvi~v   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-DEIEGLK----------------CYRSVRELPKDVDVIVFVV   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-SEETTEE----------------CBSSGGGSCTTCCEEEECS
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc-ccccCcc----------------ccccchhccccceEEEEEe
Confidence            589999998   7799999999999999988875432 1111111                1111222223478887765


Q ss_pred             ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233          96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIH  131 (303)
Q Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  131 (303)
                      ...              ....+++.|.+.|++.+++
T Consensus        65 p~~--------------~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          65 PPK--------------VGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             CHH--------------HHHHHHHHHHHTTCCEEEE
T ss_pred             CHH--------------HHHHHHHHHHhcCCceEEe
Confidence            431              2335777788889876554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.68  E-value=0.0099  Score=43.90  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=31.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~   53 (303)
                      .+++|+|.|+ |..|++++.+|.+.|. +|.++.|+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHH
Confidence            4679999996 9999999999999995 7888888754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.66  E-value=0.0059  Score=42.64  Aligned_cols=35  Identities=26%  Similarity=0.368  Sum_probs=32.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +++++|+|| |++|-.++..|.+.|.+|+++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            579999997 99999999999999999999999754

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.64  E-value=0.017  Score=42.32  Aligned_cols=74  Identities=15%  Similarity=0.088  Sum_probs=46.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~D~vi~~a~   96 (303)
                      +.+|+|.|+ |-+|...+..+...|.+|+++++++.+ .+..+..+   -.+++..+-.| .+.+.+...+.|.+|.+.+
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~-~~~a~~~G---a~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK-LELARKLG---ASLTVNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTT---CSEEEETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH-HHhhhccC---ccccccccchhHHHHHHHhhcCCcccccccc
Confidence            568999986 999999999998899999999886432 23222222   12333332222 2334444455666665554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.64  E-value=0.012  Score=43.47  Aligned_cols=75  Identities=13%  Similarity=0.132  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      +.+|+|.|+ |.+|...+..+...|. .|++.+++ +...+..+..   ...+++..+-.+.+...+...  ++|+||.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~-~~k~~~~~~~---ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK-EEKLKLAERL---GADHVVDARRDPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS-HHHHHHHHHT---TCSEEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch-hHHHHHHhhc---ccceeecCcccHHHHHHHhhCCCCceEEEEe
Confidence            568999986 9999999999988885 55666665 3333333322   224555544333444444433  38999999


Q ss_pred             ccc
Q psy4233          95 IGR   97 (303)
Q Consensus        95 a~~   97 (303)
                      +|.
T Consensus       108 ~g~  110 (172)
T d1h2ba2         108 VGS  110 (172)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            985

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.63  E-value=0.0076  Score=42.21  Aligned_cols=34  Identities=15%  Similarity=0.156  Sum_probs=31.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++++|.|| |+||.+++..|.+.|.+|+++.|.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            579999997 9999999999999999999998875

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.58  E-value=0.0088  Score=46.89  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +.+||+|+|| |..|...+..|.++|++|+++.|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3568999997 9999999999999999999999864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.039  Score=40.53  Aligned_cols=59  Identities=14%  Similarity=0.186  Sum_probs=47.4

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      +..+++|.|+|.+..+|..++..|+++|..|+.......                       +   +.+..+++|++|.+
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~-----------------------~---l~~~~~~aDivi~a   89 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA-----------------------H---LDEEVNKGDILVVA   89 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-----------------------S---HHHHHTTCSEEEEC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc-----------------------c---HHHHHhhccchhhc
Confidence            467899999999999999999999999999998766432                       1   23455678999988


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      +|...
T Consensus        90 ~G~~~   94 (170)
T d1a4ia1          90 TGQPE   94 (170)
T ss_dssp             CCCTT
T ss_pred             ccccc
Confidence            88643

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.53  E-value=0.0093  Score=44.37  Aligned_cols=75  Identities=21%  Similarity=0.207  Sum_probs=48.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~   93 (303)
                      +.+|+|.|+ |-+|...+..+...|. +|+++++++. ..+..+..+   -.+++..+-.+ .+.+.+...  ++|+||.
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~-r~~~a~~lG---a~~~i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPI-CVEAAKFYG---ATDILNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHH-HHHHHHHHT---CSEEECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccchhh-hHHHHHhhC---ccccccccchhHHHHHHHHhhccCcceEEE
Confidence            568999986 9999999999999995 6888887643 233222222   12333222122 344445543  3899999


Q ss_pred             cccc
Q psy4233          94 LIGR   97 (303)
Q Consensus        94 ~a~~   97 (303)
                      ++|.
T Consensus       103 ~~g~  106 (174)
T d1jqba2         103 AGGG  106 (174)
T ss_dssp             CSSC
T ss_pred             ccCC
Confidence            9985

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.48  E-value=0.0073  Score=43.82  Aligned_cols=65  Identities=23%  Similarity=0.194  Sum_probs=43.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |||.++|+ |.+|+++++.|++.| ++|++.+|+++. .+.+....   +++.. -|..       .+.++|+||-+.-
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~-~~~l~~~~---~~~~~-~~~~-------~v~~~Div~lavk   66 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK-RERLEKEL---GVETS-ATLP-------ELHSDDVLILAVK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH-HHHHHHHT---CCEEE-SSCC-------CCCTTSEEEECSC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH-HHHhhhhc---ccccc-cccc-------cccccceEEEecC
Confidence            78999996 999999999999887 999999997543 23332211   23322 2211       1456899987753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.46  E-value=0.013  Score=44.06  Aligned_cols=69  Identities=10%  Similarity=0.067  Sum_probs=47.8

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      ....+++.|.| .|.||+.+++.|..-|.+|...+|...........            .+....++.++++.+|+|+.+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~------------~~~~~~~l~~~l~~sD~v~~~  107 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL------------NLTWHATREDMYPVCDVVTLN  107 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH------------TCEECSSHHHHGGGCSEEEEC
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccc------------cccccCCHHHHHHhccchhhc
Confidence            45688999999 59999999999999999999999864322111110            011234456677888888655


Q ss_pred             cc
Q psy4233          95 IG   96 (303)
Q Consensus        95 a~   96 (303)
                      ..
T Consensus       108 ~p  109 (188)
T d2naca1         108 CP  109 (188)
T ss_dssp             SC
T ss_pred             cc
Confidence            44

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.36  E-value=0.014  Score=40.38  Aligned_cols=35  Identities=14%  Similarity=0.153  Sum_probs=31.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      +++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            579999996 99999999999999999999999753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.015  Score=43.40  Aligned_cols=37  Identities=19%  Similarity=0.151  Sum_probs=33.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .++++|+|+|| |..|-..+..|.++||+|+++.+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            45789999997 99999999999999999999998753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.11  Score=40.59  Aligned_cols=107  Identities=16%  Similarity=0.184  Sum_probs=63.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--hc-----C-------------CCCceEEEecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--LC-----G-------------DLGQVLFQPYHP   75 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--~~-----~-------------~~~~~~~~~~Dl   75 (303)
                      ...+|+|.|+ |.+|++++..|...|. ++++++...-+....-+  ++     +             .-+.+++...+.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~  107 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  107 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence            4569999995 8899999999999994 67776543221111100  00     0             013334433333


Q ss_pred             -CCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          76 -RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        76 -~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                       .+.......+...|+++.+...             ......+-++|.+.++ .+|+.+..+.+
T Consensus       108 ~~~~~~~~~~~~~~divid~~d~-------------~~~~~~in~~~~~~~i-p~i~g~~~~~~  157 (247)
T d1jw9b_         108 LLDDAELAALIAEHDLVLDCTDN-------------VAVRNQLNAGCFAAKV-PLVSGAAIRME  157 (247)
T ss_dssp             CCCHHHHHHHHHTSSEEEECCSS-------------HHHHHHHHHHHHHHTC-CEEEEEEEBTE
T ss_pred             hhhhccccccccccceeeeccch-------------hhhhhhHHHHHHHhCC-Ccccccccccc
Confidence             2445566677889999887532             2222346667777776 67766554443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.13  E-value=0.01  Score=44.51  Aligned_cols=35  Identities=20%  Similarity=0.262  Sum_probs=31.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~   53 (303)
                      ++||+|+|| |..|...+..|.++|+ +|+++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999997 9999999999999998 5999988753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.07  E-value=0.05  Score=37.68  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=52.3

Q ss_pred             CcEEEEEcC----------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc
Q psy4233          18 GVVATVFGA----------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY   87 (303)
Q Consensus        18 ~~~vlVtGa----------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   87 (303)
                      .+||||.|+          --+.+.+.+++|.+.|++++.+.-++..-......      ..-+...--..+.+.++++.
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~------aD~lYfePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM------ADATYIEPIHWEVVRKIIEK   80 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG------SSEEECSCCCHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh------cceeeeecCCHHHHHHHHHH
Confidence            579999998          34789999999999999999987776543332221      22234444577888887754


Q ss_pred             --cCEEEEccc
Q psy4233          88 --SNVVINLIG   96 (303)
Q Consensus        88 --~D~vi~~a~   96 (303)
                        +|.|+-..|
T Consensus        81 E~pd~il~~~G   91 (127)
T d1a9xa3          81 ERPDAVLPTMG   91 (127)
T ss_dssp             HCCSEEECSSS
T ss_pred             hCcCCeEEEee
Confidence              999986655

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.02  E-value=0.015  Score=47.53  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=31.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      ++||+|+|| |.-|..++..|.++|++|.++-+++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            689999996 99999999999999999999988653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.99  E-value=0.017  Score=42.76  Aligned_cols=75  Identities=19%  Similarity=0.127  Sum_probs=45.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCcccccchhcCCCCceEEEecCC--CCHHHHHHHh--cccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RNDDEIRKAI--KYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~--~~~D~vi   92 (303)
                      +.+|+|.|+ |.+|...+..+...|.+ |++.+++ ++..+..+..+   -.+++..+-  .+........  .++|+||
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-~~k~~~ak~lG---a~~~i~~~~~~~~~~~~~~~~~~~g~D~vi  103 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-KDKFARAKEFG---ATECINPQDFSKPIQEVLIEMTDGGVDYSF  103 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-GGGHHHHHHHT---CSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-HHHHHHHHHhC---CcEEEeCCchhhHHHHHHHHHcCCCCcEee
Confidence            568999998 56899999999999954 5555554 44444333332   123333211  2222222222  3499999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .+.|.
T Consensus       104 d~~G~  108 (176)
T d2fzwa2         104 ECIGN  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.92  E-value=0.013  Score=42.25  Aligned_cols=36  Identities=22%  Similarity=0.298  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGN   52 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~   52 (303)
                      +|++|.|.|+||-||...+.-+.+.  .++|.+++-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            3689999999999999999999775  38999987653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.89  E-value=0.026  Score=41.83  Aligned_cols=75  Identities=15%  Similarity=0.139  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHh--cccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAI--KYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~--~~~D~vi   92 (303)
                      +.+|+|+|+ |.||...+..+...|. .|++.++++ ...+..+..+   -.+++...-.|  ........  .++|++|
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~-~r~~~a~~~G---a~~~i~~~~~~~~~~~~~~~~~~~G~d~vi  103 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDING-EKFPKAKALG---ATDCLNPRELDKPVQDVITELTAGGVDYSL  103 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG-GGHHHHHHTT---CSEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccch-HHHHHHHHhC---CCcccCCccchhhhhhhHhhhhcCCCcEEE
Confidence            569999985 9999999999999996 577766654 3333322222   23333322222  23333322  3499999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .++|.
T Consensus       104 e~~G~  108 (174)
T d1e3ia2         104 DCAGT  108 (174)
T ss_dssp             ESSCC
T ss_pred             Eeccc
Confidence            99985

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.069  Score=36.51  Aligned_cols=74  Identities=15%  Similarity=0.101  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCC----------hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc
Q psy4233          17 NGVVATVFGASG----------YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        17 ~~~~vlVtGatG----------~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ..+||||.|+..          +.+.+.+++|.+.|++++.+.-++..-......      ..-+...--..+.+.++++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~------aD~lYfeplt~e~v~~Ii~   76 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT------SDRLYFEPVTLEDVLEIVR   76 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS------SSEEECCCCSHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh------cCceEEccCCHHHHHHHHH
Confidence            457999999733          789999999999999999987776543322111      2223333446777887664


Q ss_pred             --ccCEEEEccc
Q psy4233          87 --YSNVVINLIG   96 (303)
Q Consensus        87 --~~D~vi~~a~   96 (303)
                        ++|.|+-..|
T Consensus        77 ~E~p~~ii~~~G   88 (121)
T d1a9xa4          77 IEKPKGVIVQYG   88 (121)
T ss_dssp             HHCCSEEECSSS
T ss_pred             HhCCCEEEeehh
Confidence              4898876554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.015  Score=41.94  Aligned_cols=35  Identities=14%  Similarity=0.255  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   52 (303)
                      |++|.|.|+||-||...+.-+.+..  ++|.+++-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            6789999999999999999888763  8999887643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.83  E-value=0.014  Score=42.10  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=31.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      +++++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56889999998 999999999999999999998654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.81  E-value=0.037  Score=38.55  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=59.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-cCEEEEccc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-SNVVINLIG   96 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~vi~~a~   96 (303)
                      .+|+|.|| |.+|+.+++++.. .+++++++....++..-. .    ..++.++.     .+.+.+..++ .+..+-+..
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~-~----I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGR-P----VRGGVIEH-----VDLLPQRVPGRIEIALLTVP   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC-E----ETTEEEEE-----GGGHHHHSTTTCCEEEECSC
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC-E----ECCEEEec-----HHHHHHHHhhcccEEEEeCC
Confidence            48999997 9999999998754 468999987754432211 1    12355542     3345555544 666555543


Q ss_pred             cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233          97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA  137 (303)
Q Consensus        97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  137 (303)
                      ..              ....+++.+.+.|++.+..++....
T Consensus        73 ~~--------------~~~~I~d~l~~~gIk~I~~f~~~~l   99 (126)
T d2dt5a2          73 RE--------------AAQKAADLLVAAGIKGILNFAPVVL   99 (126)
T ss_dssp             HH--------------HHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred             HH--------------HHHHHHHHHHHcCCCEEeecCceee
Confidence            21              1235788888889987776655443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.77  E-value=0.032  Score=40.70  Aligned_cols=73  Identities=10%  Similarity=0.098  Sum_probs=46.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC-CC-HHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP-RN-DDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl-~d-~~~~~~~~~~~D~vi~~a   95 (303)
                      +.+|+|.|+ |-+|...+..+...|.+|+++++++. ..+..+..+    +..+.... .| .+.+.....+.|.+|.++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~-r~~~~k~~G----a~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  101 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE-KLELAKELG----ADLVVNPLKEDAAKFMKEKVGGVHAAVVTA  101 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH-HHHHHHHTT----CSEEECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH-HhhhhhhcC----cceecccccchhhhhcccccCCCceEEeec
Confidence            568999875 99999999999999999999988643 333333322    32222221 23 334555556666666665


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus       102 ~  102 (168)
T d1rjwa2         102 V  102 (168)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.68  E-value=0.02  Score=46.49  Aligned_cols=40  Identities=20%  Similarity=0.227  Sum_probs=34.5

Q ss_pred             CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .+...++++|+|+|| |..|...+..|.++|++|+++.+++
T Consensus        24 ~~~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          24 LKATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            334456789999996 9999999999999999999998764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=94.55  E-value=0.033  Score=41.15  Aligned_cols=76  Identities=18%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEe-cCCCC-HHHHHHHh--cccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-YHPRN-DDEIRKAI--KYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~Dl~d-~~~~~~~~--~~~D~vi   92 (303)
                      +.+|+|.|+ |-+|...+.++...| .+|++.++++. ..+..+..+   ..+.+. .+..+ .+......  .++|++|
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~-k~~~a~~~G---a~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKD-KFAKAKEVG---ATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG-GHHHHHHTT---CSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHH-HHHHHHHhC---CeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            568999999 568999999999988 57888877643 333323222   122222 23222 23333333  3499999


Q ss_pred             EccccC
Q psy4233          93 NLIGRE   98 (303)
Q Consensus        93 ~~a~~~   98 (303)
                      .+.|..
T Consensus       104 d~~G~~  109 (176)
T d2jhfa2         104 EVIGRL  109 (176)
T ss_dssp             ECSCCH
T ss_pred             ecCCch
Confidence            998863

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.53  E-value=0.038  Score=40.09  Aligned_cols=72  Identities=14%  Similarity=0.031  Sum_probs=39.5

Q ss_pred             CcEEEEEcCCChhHHHHH-HHHHhCC-CeEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHH--hcccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLC-NKLGKQG-SQIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA--IKYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~-~~Ll~~g-~~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~D~vi   92 (303)
                      ++||.|+| +|.+|+.+. +.|.... .+++++. |+...........   .++.+..   ...+++.+.  +.++|+||
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~---~~i~~~~---~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTTY---AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEES---SHHHHHHHSGGGGGEEEEE
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh---cCCcccc---cceeeeeecccccccCEEE
Confidence            56999999 899998755 5444333 5777764 4433221111110   1122221   234455443  35699999


Q ss_pred             Eccc
Q psy4233          93 NLIG   96 (303)
Q Consensus        93 ~~a~   96 (303)
                      .+..
T Consensus        77 ~ATp   80 (157)
T d1nvmb1          77 DATS   80 (157)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            8754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.51  E-value=0.022  Score=41.77  Aligned_cols=34  Identities=15%  Similarity=0.179  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   52 (303)
                      ++||+|+|| |++|-.++..|.+.+  .+|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999997 999999999999987  4788887765

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.37  E-value=0.018  Score=45.92  Aligned_cols=33  Identities=18%  Similarity=0.357  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |+|+|+|| |.-|...+..|.++|++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            68999997 9999999999999999999998864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.37  E-value=0.02  Score=43.20  Aligned_cols=32  Identities=28%  Similarity=0.254  Sum_probs=27.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |||.|.| .|++|..++..| ++|++|++++-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            7999998 699999998655 6899999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.17  E-value=0.022  Score=45.20  Aligned_cols=31  Identities=29%  Similarity=0.443  Sum_probs=29.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |+|+|| |.+|..++.+|.++|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999997 9999999999999999999999864

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.14  E-value=0.039  Score=40.78  Aligned_cols=75  Identities=17%  Similarity=0.069  Sum_probs=48.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~--~~D~vi   92 (303)
                      +.+|+|.|+ |-+|...+..+...|. +|++.++++ +..+..+..+   -.+++...-.|  .+.......  +.|++|
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~-~kl~~a~~lG---a~~~i~~~~~d~~~~~~~~~~~~~G~d~vi  102 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK-DKFPKAIELG---ATECLNPKDYDKPIYEVICEKTNGGVDYAV  102 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG-GGHHHHHHTT---CSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH-HHHHHHHHcC---CcEEEcCCCchhHHHHHHHHhcCCCCcEEE
Confidence            568999996 9999999999999995 688877764 3333333322   23333322222  233333333  489999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .+++.
T Consensus       103 d~~g~  107 (174)
T d1p0fa2         103 ECAGR  107 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCC
Confidence            99875

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.14  E-value=0.028  Score=42.78  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=26.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      |||+|.|. +..|..+++.|++.|++|.++.-
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt   31 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFT   31 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEc
Confidence            68999975 66899999999999999977653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.14  E-value=0.16  Score=40.50  Aligned_cols=38  Identities=18%  Similarity=0.192  Sum_probs=33.2

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      ..++.+++|+|-| .|.+|+++++.|.+.|.+|++++-+
T Consensus        31 ~~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          31 TPGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             CSSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            3467789999999 4999999999999999999988654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.13  E-value=0.0066  Score=45.01  Aligned_cols=109  Identities=7%  Similarity=0.005  Sum_probs=58.3

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCC----CeEEEeecCCCcc-cccchhc------CCCCceEEEecCCCCHHHHHHHhc
Q psy4233          19 VVATVFGA-SGYMGSYLCNKLGKQG----SQIIIPYRGNFYD-VRDLRLC------GDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        19 ~~vlVtGa-tG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~-~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      |||.|+|| +.+.+..++..++...    .++..++.++... .+.....      .....+...     ..++..+.++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~td~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH-----LTLDRRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee-----ecCCchhhcC
Confidence            69999997 3344455555555432    3788888764321 1111110      000111111     1122345688


Q ss_pred             ccCEEEEccccCccccc----------------------hhhhhhhcchHHHHHHHHHhcCCceEEEE
Q psy4233          87 YSNVVINLIGREFATKN----------------------FTIADANVEIPARLARLSKEMGVEKFIHI  132 (303)
Q Consensus        87 ~~D~vi~~a~~~~~~~~----------------------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  132 (303)
                      ++|+||.+++.......                      ......|+...+.+++.+++.....+++.
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~  144 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN  144 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999999986321100                      01123466777888888888876544443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.12  E-value=0.029  Score=44.72  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=31.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .|||+|+|| |.-|...+.+|.+.|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            479999997 9999999999999999999998764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.05  E-value=0.034  Score=45.65  Aligned_cols=36  Identities=19%  Similarity=0.117  Sum_probs=31.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   52 (303)
                      .++++|+|+|| |.-|-..+..|+++|  ++|+++-|+.
T Consensus         2 ~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           2 PTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            35789999997 999999999999877  6999998874

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.87  E-value=0.032  Score=41.98  Aligned_cols=33  Identities=18%  Similarity=0.167  Sum_probs=28.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN   52 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~   52 (303)
                      |||+|+|| |++|..++..|.+.+  .+|+++.|.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            79999997 999999999998864  6898888764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.83  E-value=0.053  Score=40.10  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEec-CCCC-HHHHHHHh--cccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-HPRN-DDEIRKAI--KYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-Dl~d-~~~~~~~~--~~~D~vi   92 (303)
                      +.+|+|+|+ |-+|...+..+...| .+|+++++++. ..+.-+..+   -.+++.. |-.+ ...+.+..  .++|++|
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~-kl~~Ak~~G---A~~~in~~~~~~~~~~~~~~~~g~G~d~vi  104 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKD-KFEKAMAVG---ATECISPKDSTKPISEVLSEMTGNNVGYTF  104 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG-GHHHHHHHT---CSEEECGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHH-HHHHHHhcC---CcEEECccccchHHHHHHHHhccccceEEE
Confidence            568999986 999999999999999 57999888643 333323322   1233322 2222 33344433  3499999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .+.|.
T Consensus       105 ~~~g~  109 (176)
T d1d1ta2         105 EVIGH  109 (176)
T ss_dssp             ECSCC
T ss_pred             EeCCc
Confidence            99875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.034  Score=44.98  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=31.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      |..|+|+|| |.-|..+++.|.++|++|.++.+++.
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            458999997 99999999999999999999987653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.50  E-value=0.029  Score=44.85  Aligned_cols=32  Identities=31%  Similarity=0.359  Sum_probs=30.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +|+|+|| |..|..++..|.+.|++|.++.|++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7999997 9999999999999999999999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.42  E-value=0.06  Score=41.60  Aligned_cols=36  Identities=22%  Similarity=0.200  Sum_probs=32.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .+.++|+|+|| |..|...+.+|.++|++|+++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            45789999997 9999999999999999999998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.37  E-value=0.054  Score=37.02  Aligned_cols=34  Identities=18%  Similarity=0.403  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh---CCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK---QGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~---~g~~V~~~~R~~   52 (303)
                      +++++|+|| |++|..++..|.+   +|.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            579999997 9999999966554   457899998864

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.31  E-value=0.077  Score=39.89  Aligned_cols=75  Identities=16%  Similarity=0.189  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEec-CCCC-HHHHHHHhc--ccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-HPRN-DDEIRKAIK--YSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-Dl~d-~~~~~~~~~--~~D~vi   92 (303)
                      +.+|+|.|+ |-+|...+..+...|. +|++.++++ +..+..+..+    ...+.- .-.| .+.+.++..  ++|++|
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~-~rl~~a~~~G----a~~~~~~~~~~~~~~i~~~t~g~g~D~vi   99 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP-ARLAHAKAQG----FEIADLSLDTPLHEQIAALLGEPEVDCAV   99 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH-HHHHHHHHTT----CEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc-hhhHhhhhcc----ccEEEeCCCcCHHHHHHHHhCCCCcEEEE
Confidence            569999986 9999888888877775 677777753 3333333322    333221 1122 233444444  389999


Q ss_pred             EccccC
Q psy4233          93 NLIGRE   98 (303)
Q Consensus        93 ~~a~~~   98 (303)
                      .+.|..
T Consensus       100 d~vG~~  105 (195)
T d1kola2         100 DAVGFE  105 (195)
T ss_dssp             ECCCTT
T ss_pred             ECcccc
Confidence            999853

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.05  E-value=0.17  Score=36.24  Aligned_cols=33  Identities=18%  Similarity=0.175  Sum_probs=27.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ||.++| .|.+|..+++.|++.|+.+ ...|..++
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            688999 5999999999999998866 45676543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.04  E-value=0.23  Score=34.78  Aligned_cols=34  Identities=21%  Similarity=0.266  Sum_probs=29.5

Q ss_pred             CCcEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeec
Q psy4233          17 NGVVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        17 ~~~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      ++++|.|+|||   +..|..+++.|++.|++++.+.-
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            46799999998   67999999999999999887644

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.88  E-value=0.054  Score=39.88  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=28.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      +++|+|+|| |++|-+++..|.+.|.+|.++.+..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            568999996 9999999999999998776655443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.87  E-value=0.069  Score=41.93  Aligned_cols=35  Identities=17%  Similarity=0.162  Sum_probs=31.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~   53 (303)
                      +++|+|+|| |..|..++..|.+.| ++|.++.|++.
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            479999997 999999999999999 58999988753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.84  E-value=0.0099  Score=46.18  Aligned_cols=27  Identities=19%  Similarity=0.287  Sum_probs=24.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEE
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQII   46 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~   46 (303)
                      |||+|+|| |.+|...+.+|.++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            68999997 9999999999999997543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.82  E-value=0.08  Score=36.04  Aligned_cols=34  Identities=26%  Similarity=0.525  Sum_probs=28.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh---CCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK---QGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~---~g~~V~~~~R~~   52 (303)
                      +++++|+|| |++|-+++..|.+   .|.+|+++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            579999997 9999999976544   478999999874

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.31  Score=36.65  Aligned_cols=79  Identities=6%  Similarity=-0.003  Sum_probs=45.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc--------hhcCCCCceEEEecCCCCHHHHHHHhcc-
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL--------RLCGDLGQVLFQPYHPRNDDEIRKAIKY-   87 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   87 (303)
                      .+|||++.| ++..+..+++.|++.|++|.++.-.++......        .......++........+.+...+.++. 
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL   80 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence            368999998 578999999999999999877654332211110        0001112344444444444444555543 


Q ss_pred             -cCEEEEccc
Q psy4233          88 -SNVVINLIG   96 (303)
Q Consensus        88 -~D~vi~~a~   96 (303)
                       +|+++.+..
T Consensus        81 ~~d~~v~~~~   90 (206)
T d1fmta2          81 QADVMVVVAY   90 (206)
T ss_dssp             TCSEEEEESC
T ss_pred             cceEEEeecc
Confidence             677666554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.76  E-value=0.18  Score=36.39  Aligned_cols=98  Identities=9%  Similarity=0.004  Sum_probs=53.1

Q ss_pred             CcEEEEEcCCChhHHH-HHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSY-LCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~-l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      .+||.|+| +|.+|+. .+..+... +.+++++.....+....+....   ++.+    ..+   +..+.+++|+|+-+.
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~---~~~~----~~~---~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW---RIPY----ADS---LSSLAASCDAVFVHS   69 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH---TCCB----CSS---HHHHHTTCSEEEECS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc---cccc----ccc---chhhhhhcccccccc
Confidence            36899999 5999976 56666654 5787766543333332222110   1111    123   334457899988776


Q ss_pred             ccCc-cc-------cc-----hhhhhhhcchHHHHHHHHHhcCC
Q psy4233          96 GREF-AT-------KN-----FTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        96 ~~~~-~~-------~~-----~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      .... ..       ..     +.-+..+..-...+++++++.++
T Consensus        70 p~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          70 STASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             CTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             cchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence            4310 00       00     00122345566678888888775

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.58  E-value=0.097  Score=44.44  Aligned_cols=76  Identities=17%  Similarity=0.131  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc--cchhc-----CC-------------CC--ceEEEecC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR--DLRLC-----GD-------------LG--QVLFQPYH   74 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~--~~~~~-----~~-------------~~--~~~~~~~D   74 (303)
                      ..||||+|+ |.+|.++++.|...|. ++++++...-+...  .-.++     +.             -+  +++.+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            558999998 6799999999999995 67777654321111  00000     00             12  24555555


Q ss_pred             CCCHHHHHHHhcccCEEEEccc
Q psy4233          75 PRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        75 l~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +.+..  ...++++|+||.+..
T Consensus       116 i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECCS
T ss_pred             ccchH--HHHHHhcchheeccC
Confidence            54433  356788999998764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=92.45  E-value=0.071  Score=43.03  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=33.4

Q ss_pred             cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |.+...-.|+|+|| |+.|-..+..|.+.|.+|+++.+.+
T Consensus         2 ~~p~~~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           2 RQPPEEVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             CCCCSEEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCCCCCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            34445568999997 9999999999999999999998864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.32  E-value=0.079  Score=38.29  Aligned_cols=31  Identities=19%  Similarity=0.247  Sum_probs=26.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ||+|+|| |++|.+++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            8999997 999999999885 578999998764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.079  Score=46.39  Aligned_cols=105  Identities=11%  Similarity=-0.013  Sum_probs=63.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCCc--eEEEec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQPY   73 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~~   73 (303)
                      ...+|+|+|+ |-+|.++++.|...| .++++++...-+....-.                    +...-+.  ++.+..
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            4569999997 779999999999999 567776553221111000                    0000122  333433


Q ss_pred             CCCCHHHHH----HHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233          74 HPRNDDEIR----KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP  139 (303)
Q Consensus        74 Dl~d~~~~~----~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~  139 (303)
                      +   ++.+.    ..+.++|+||.+...             ......+-+.|++.++ .+|..++.+.+|
T Consensus       103 ~---~~~~~~~~~~~~~~~dvVv~~~~~-------------~~~~~~l~~~c~~~~i-p~i~~~~~G~~G  155 (529)
T d1yova1         103 S---PENLLDNDPSFFCRFTVVVATQLP-------------ESTSLRLADVLWNSQI-PLLICRTYGLVG  155 (529)
T ss_dssp             C---HHHHHHSCGGGGGGCSEEEEESCC-------------HHHHHHHHHHHHHHTC-CEEEEEEETTEE
T ss_pred             C---chhhhhhHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEeccCCEE
Confidence            3   33322    346778999976421             2233357888888887 788888777654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.03  E-value=0.072  Score=38.55  Aligned_cols=71  Identities=11%  Similarity=0.183  Sum_probs=52.0

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                      .+.+++++|.| =|++|+-+++.|...|.+|++....|-...+.   .  ..+.+        ...+.++++..|++|-+
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA---~--mdGf~--------v~~~~~a~~~aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQA---V--MEGFN--------VVTLDEIVDKGDFFITC   85 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH---H--TTTCE--------ECCHHHHTTTCSEEEEC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHH---H--hcCCc--------cCchhHccccCcEEEEc
Confidence            36788999999 59999999999999999999987765332221   1  12222        23356788889999999


Q ss_pred             cccCc
Q psy4233          95 IGREF   99 (303)
Q Consensus        95 a~~~~   99 (303)
                      .|..+
T Consensus        86 TGn~~   90 (163)
T d1v8ba1          86 TGNVD   90 (163)
T ss_dssp             CSSSS
T ss_pred             CCCCc
Confidence            88643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.99  E-value=0.51  Score=36.45  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=32.2

Q ss_pred             cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      ++.+++|+|-| .|.+|+++++.|.+.|.+|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            46789999999 6999999999999999999987754

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.71  E-value=0.019  Score=42.21  Aligned_cols=74  Identities=9%  Similarity=0.024  Sum_probs=40.4

Q ss_pred             CcEEEEEcCCChhHHH-HHHHHHhC-C----CeEEEeecCCCccc---ccchhc--CCCCceEEEecCCCCHHHHHHHhc
Q psy4233          18 GVVATVFGASGYMGSY-LCNKLGKQ-G----SQIIIPYRGNFYDV---RDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK   86 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~-l~~~Ll~~-g----~~V~~~~R~~~~~~---~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~   86 (303)
                      ..||.|.|| |.+|.. ++..++.+ .    .++.+++.++....   ......  ......++...     .+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            458999998 556654 44455442 1    37888887643221   011000  00011122211     23556788


Q ss_pred             ccCEEEEcccc
Q psy4233          87 YSNVVINLIGR   97 (303)
Q Consensus        87 ~~D~vi~~a~~   97 (303)
                      ++|+||.+++.
T Consensus        77 ~AD~Vvitag~   87 (167)
T d1u8xx1          77 DVDFVMAHIRV   87 (167)
T ss_dssp             SCSEEEECCCT
T ss_pred             CCCEEEECCCc
Confidence            99999999986

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.25  Score=39.49  Aligned_cols=33  Identities=18%  Similarity=0.132  Sum_probs=28.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |++=--.||..|.+|+++|+.+|++|+.+.+..
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            444456789999999999999999999998753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.64  E-value=0.09  Score=41.53  Aligned_cols=32  Identities=31%  Similarity=0.338  Sum_probs=29.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      -|+|+|| |..|..++.+|.++|++|+++.+..
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3899996 9999999999999999999998864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.59  E-value=0.47  Score=34.74  Aligned_cols=100  Identities=8%  Similarity=0.026  Sum_probs=55.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~   94 (303)
                      +||.|+| +|.+|+..++.|... +.+|+++.-...+....+. .........+    ..|   ++++++  ++|+|+-+
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~---~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGS---YESLLEDPEIDALYVP   73 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESS---HHHHHHCTTCCEEEEC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCc---HHHhhhccccceeeec
Confidence            6899999 599999999999876 4788876433333222221 1111111111    123   444443  48999876


Q ss_pred             cccCcc----------ccc---hhhhhhhcchHHHHHHHHHhcCC
Q psy4233          95 IGREFA----------TKN---FTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        95 a~~~~~----------~~~---~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      .....-          ...   +.-...+..-.+.+++.+++.++
T Consensus        74 tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          74 LPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             CCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             ccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            543100          000   01112356667778888888775

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=91.55  E-value=0.16  Score=38.22  Aligned_cols=37  Identities=24%  Similarity=0.456  Sum_probs=33.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      .+..+++|.|-| .|.+|+++++.|.+.|.+|++.+.+
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch
Confidence            468899999999 6999999999999999999987654

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.13  Score=36.14  Aligned_cols=35  Identities=29%  Similarity=0.478  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH----hCCCeEEEeecCCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLG----KQGSQIIIPYRGNF   53 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll----~~g~~V~~~~R~~~   53 (303)
                      .++++|.|| |++|.+++..|.    +.|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            568999997 999999999885    35889999988653

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.50  E-value=0.34  Score=35.23  Aligned_cols=31  Identities=16%  Similarity=0.283  Sum_probs=27.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      |||.|=| -|-||+.+.|.|.+++.+|.++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence            5888888 699999999999999999888754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.45  E-value=0.19  Score=35.95  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=28.7

Q ss_pred             CcEEEEE-cCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVF-GASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVt-GatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      .+.++|. .+.||+|..++..|.+.|.+|+++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            3355555 2459999999999999999999999875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.35  E-value=0.096  Score=40.05  Aligned_cols=32  Identities=19%  Similarity=0.309  Sum_probs=29.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      -|+|+|| |.-|...+..|.++|++|.++.+++
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            3899995 9999999999999999999998875

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.15  Score=40.96  Aligned_cols=34  Identities=15%  Similarity=0.200  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..||+|+|| |.-|-..+..|.++|++|+++-++.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            458999997 9999999999999999999996654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=90.99  E-value=0.49  Score=34.59  Aligned_cols=37  Identities=11%  Similarity=0.042  Sum_probs=25.7

Q ss_pred             CCCcEEEEEcCCChhHHH-HHHHHHhCC--CeEEEeecCCC
Q psy4233          16 FNGVVATVFGASGYMGSY-LCNKLGKQG--SQIIIPYRGNF   53 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~-l~~~Ll~~g--~~V~~~~R~~~   53 (303)
                      |..+||.|+| +|.+|+. .+..+.+.+  .+++++.....
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~   40 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTR   40 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSH
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccH
Confidence            4466999999 5999987 467776643  57776654433

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.96  E-value=0.057  Score=39.86  Aligned_cols=32  Identities=25%  Similarity=0.304  Sum_probs=25.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      ..+|+|+|| |++|-+++..|.+.|.+|.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            347999996 99999999999999876555443

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=90.68  E-value=0.24  Score=35.80  Aligned_cols=96  Identities=10%  Similarity=0.014  Sum_probs=51.0

Q ss_pred             cEEEEEcCCChhHHH-HHHHHHhCC-CeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHh-cccCEEEEc
Q psy4233          19 VVATVFGASGYMGSY-LCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAI-KYSNVVINL   94 (303)
Q Consensus        19 ~~vlVtGatG~iG~~-l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~D~vi~~   94 (303)
                      +||.|+|+ |.+|+. .+..|.+.+ .++.++++++. ....+. .++    +..+   ..|.++   ++ .++|+|+-+
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~-~~~~~~~~~~----~~~~---~~~~~~---ll~~~iD~V~I~   69 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPK-VLGTLATRYR----VSAT---CTDYRD---VLQYGVDAVMIH   69 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHH-HHHHHHHHTT----CCCC---CSSTTG---GGGGCCSEEEEC
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHH-HHHHHHHhcc----cccc---cccHHH---hcccccceeccc
Confidence            69999995 888976 566666554 57766655432 222222 111    1111   123332   33 358998876


Q ss_pred             cccCcc----------ccc---hhhhhhhcchHHHHHHHHHhcCC
Q psy4233          95 IGREFA----------TKN---FTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        95 a~~~~~----------~~~---~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      .....-          ...   +.-...+..-...+.+++++.+.
T Consensus        70 tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~  114 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQ  114 (167)
T ss_dssp             SCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCC
Confidence            543110          000   01123355667788888888876

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.64  E-value=0.11  Score=41.43  Aligned_cols=32  Identities=28%  Similarity=0.494  Sum_probs=29.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   52 (303)
                      +|+|+|| |.+|..++..|.++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            7999997 9999999999999995 799998874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.56  E-value=0.01  Score=42.94  Aligned_cols=63  Identities=16%  Similarity=0.129  Sum_probs=32.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      |.++| +|.+|+++++.|.+.++.+.+.+|+.. ..+.+.....   .  ...+      ..++.+.+|+||-+..
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~-~~~~l~~~~~---~--~~~~------~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSID-RARNLAEVYG---G--KAAT------LEKHPELNGVVFVIVP   64 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHH-HHHHHHHHTC---C--CCCS------SCCCCC---CEEECSC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChh-hhcchhhccc---c--cccc------hhhhhccCcEEEEecc
Confidence            45677 699999999987654443456777643 3333332211   0  0111      2235567899998864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.50  E-value=0.077  Score=40.97  Aligned_cols=37  Identities=27%  Similarity=0.593  Sum_probs=32.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      .++.+++|+|-| .|.+|+++++.|.+.|.+|++.+.+
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc
Confidence            457889999999 5999999999999999999987654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.96  E-value=0.15  Score=39.24  Aligned_cols=32  Identities=25%  Similarity=0.386  Sum_probs=28.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~   52 (303)
                      +|+|+|| |.-|...+..|.++|+ +|+++-+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            7999997 9999999999999995 799998864

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=89.93  E-value=0.28  Score=35.70  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=45.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHh--cccCEEE
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAI--KYSNVVI   92 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~--~~~D~vi   92 (303)
                      +.+|+|.|+ |-+|...+.++...| .+|+++++++ +..+..+..+   -.+++..+-.+  .+......  .++|++|
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~-~rl~~a~~~G---Ad~~in~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP-DKFEKAKVFG---ATDFVNPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG-GGHHHHHHTT---CCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchH-HHHHHHHHcC---CcEEEcCCCcchhHHHHHHhhccCCcceee
Confidence            568999997 557877777777777 5688877764 3333333322   23444332111  23444443  3499999


Q ss_pred             Ecccc
Q psy4233          93 NLIGR   97 (303)
Q Consensus        93 ~~a~~   97 (303)
                      .+.|.
T Consensus       104 d~~G~  108 (175)
T d1cdoa2         104 ECVGN  108 (175)
T ss_dssp             ECSCC
T ss_pred             eecCC
Confidence            99885

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.79  E-value=0.2  Score=36.72  Aligned_cols=37  Identities=24%  Similarity=0.271  Sum_probs=31.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY   54 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   54 (303)
                      ..+++|+|.|+ |..+++++-+|.+.| +|+++.|+...
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            56889999996 889999999997766 89999997543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=89.50  E-value=1.3  Score=31.86  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=26.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeec
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYR   50 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R   50 (303)
                      +||.|-| -|-||+.++|+++++. .+|.++.-
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd   33 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND   33 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence            6899998 7999999999999985 67777654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.05  E-value=0.39  Score=34.26  Aligned_cols=36  Identities=19%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCC
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNF   53 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~   53 (303)
                      ..++|+|+|| |.+|...+..+++.|. +|+++.|+..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            3568999997 9999999999999995 5878888653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.68  E-value=0.41  Score=36.39  Aligned_cols=103  Identities=13%  Similarity=0.012  Sum_probs=54.3

Q ss_pred             CcEEEEEcCCChhHH-HHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEE
Q psy4233          18 GVVATVFGASGYMGS-YLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVIN   93 (303)
Q Consensus        18 ~~~vlVtGatG~iG~-~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~   93 (303)
                      .-+|.|+|+ |.+|+ +++..+... +.+|+++.....+..+.....-..+......  ..|   ++++++  ++|+|+-
T Consensus        33 ~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~--~~d---~~ell~~~~iD~V~I  106 (221)
T d1h6da1          33 RFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYD--YSN---FDKIAKDPKIDAVYI  106 (221)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEEC--SSS---GGGGGGCTTCCEEEE
T ss_pred             CEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccc--cCc---hhhhcccccceeeee
Confidence            348999995 99996 566766654 5788866444333333222111111111111  123   334454  4888887


Q ss_pred             ccccCcc-c--------cc----hhhhhhhcchHHHHHHHHHhcCC
Q psy4233          94 LIGREFA-T--------KN----FTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        94 ~a~~~~~-~--------~~----~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      +.....- .        ..    +.-...+......|.+++++.++
T Consensus       107 ~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             ccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence            6543110 0        00    01122466677788888888876

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=88.56  E-value=1.4  Score=32.38  Aligned_cols=82  Identities=11%  Similarity=-0.046  Sum_probs=41.1

Q ss_pred             cccCEEEEccccCccccc-hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC--CCCCCCCCCchhHHHHHHHHH
Q psy4233          86 KYSNVVINLIGREFATKN-FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP--PTYYISGGSQFYRTKYQGEKE  162 (303)
Q Consensus        86 ~~~D~vi~~a~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~--~~~~~~~~~~y~~~K~~~e~~  162 (303)
                      +..|+||-+.|..+.... ....+......+.+++.+++.+. ++|+++........  ..........|   ....+++
T Consensus        70 ~~~D~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~-~~vl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  145 (208)
T d2o14a2          70 KPGDYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGA-DVILSTPQGRATDFTSEGIHSSVNRWY---RASILAL  145 (208)
T ss_dssp             CTTCEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTC-EEEEECCCCCTTCBCTTSCBCCTTSTT---HHHHHHH
T ss_pred             CCCCEEEEEcCCCcccccccccHHHHHHHHHHHHHHHHhcCC-ceeeccccccccccccccchHHHHHHH---HHHHHHh
Confidence            347999888886543211 11122223345578888888877 55666544332221  11111112223   3345566


Q ss_pred             HHhhCCCEE
Q psy4233         163 VLREFPEAT  171 (303)
Q Consensus       163 ~~~~~~~~~  171 (303)
                      +++.+++++
T Consensus       146 a~~~~v~~v  154 (208)
T d2o14a2         146 AEEEKTYLI  154 (208)
T ss_dssp             HHHTTCEEE
T ss_pred             hccCCcEEe
Confidence            677676654

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.53  E-value=0.017  Score=42.34  Aligned_cols=74  Identities=11%  Similarity=-0.106  Sum_probs=41.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHH-hC-----CCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233          19 VVATVFGASGYMGSYLCNKLG-KQ-----GSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIKYSNV   90 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll-~~-----g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~   90 (303)
                      |||.|+|| |-+|...+-..+ ..     ..++.+++.++...........  -.........  ++   ..+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC---cccccCCCCE
Confidence            69999998 657766664332 21     2589998886543211110000  0011222221  12   3467789999


Q ss_pred             EEEccccC
Q psy4233          91 VINLIGRE   98 (303)
Q Consensus        91 vi~~a~~~   98 (303)
                      ||..++..
T Consensus        75 VVita~~~   82 (162)
T d1up7a1          75 VIFQFRPG   82 (162)
T ss_dssp             EEECCCTT
T ss_pred             EEEecccC
Confidence            99999864

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.50  E-value=0.37  Score=36.18  Aligned_cols=38  Identities=16%  Similarity=0.222  Sum_probs=26.5

Q ss_pred             CCcEEEEEcCCChhHHH-HHHHH---HhC-----CCeEEEeecCCCc
Q psy4233          17 NGVVATVFGASGYMGSY-LCNKL---GKQ-----GSQIIIPYRGNFY   54 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~-l~~~L---l~~-----g~~V~~~~R~~~~   54 (303)
                      .+-.++|.||||-+... |..+|   ...     +..|+++.|++-+
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s   65 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT   65 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCS
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCC
Confidence            35579999999999875 33333   223     3679999998654

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.38  E-value=1.1  Score=34.13  Aligned_cols=77  Identities=10%  Similarity=0.074  Sum_probs=51.4

Q ss_pred             CcEEEEEcC-CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFGA-SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +++||=.|+ ||+.-.++++. ... ..|++++-++.............+++.++.+|..++.........+|++++...
T Consensus        75 G~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~~  152 (230)
T d1g8sa_          75 DSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVA  152 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred             CCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecccc
Confidence            679998885 78888888885 333 489999987543322222333446788999999988866544444555655443

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=88.21  E-value=1  Score=30.26  Aligned_cols=35  Identities=11%  Similarity=0.170  Sum_probs=31.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..||+|-|-||..|+.-+++.++-|.+|.+-+...
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPg   40 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPG   40 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccC
Confidence            35899999999999999999999999998877643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.97  E-value=0.26  Score=39.74  Aligned_cols=31  Identities=19%  Similarity=0.320  Sum_probs=28.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      |+|+|| |.-|...+..|.++|++|+++-+++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789996 9999999999999999999998754

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.53  E-value=0.32  Score=36.09  Aligned_cols=32  Identities=16%  Similarity=0.308  Sum_probs=25.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-----CeEEEeec
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-----SQIIIPYR   50 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-----~~V~~~~R   50 (303)
                      +|||.|=| -|-||+.++|++++++     .+|.++.-
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind   38 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVD   38 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence            57999999 7999999999999864     35666543

>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Putative arsenical resistance protein
species: Shigella flexneri [TaxId: 623]

Probab=87.36  E-value=2.4  Score=32.27  Aligned_cols=101  Identities=10%  Similarity=-0.117  Sum_probs=54.3

Q ss_pred             cccccccCCCCcccCCCcEEEEEcCCC-------hhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecC
Q psy4233           2 CRVHLKKGTGGRSSFNGVVATVFGASG-------YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH   74 (303)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vlVtGatG-------~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~D   74 (303)
                      |..+.-+..|.-.+-.++||+++.||-       .+-..+++.|.+.|++|..++-.......    . .  .    ..+
T Consensus        18 ~~~~~~p~~~~~~~~~~~KIl~I~GS~R~~s~s~~la~~~~~~l~~~G~ev~~idL~dlpl~~----~-~--~----~~~   86 (233)
T d2fzva1          18 SFAIERPALGLAPDAPPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPD----Q-V--Q----SDD   86 (233)
T ss_dssp             TTCCSCTTTTTSCCCSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTT----T-S--G----GGC
T ss_pred             hhccCCccccCCCCCCCCeEEEEeCCCCCCCHHHHHHHHHHHHhhhcCeEEEEEccCCCCCCC----c-c--c----ccC
Confidence            344444443333334466776665542       44455566677779999888654321100    0 0  0    001


Q ss_pred             CCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHH
Q psy4233          75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLS  121 (303)
Q Consensus        75 l~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~  121 (303)
                      -.+...+.+.+..+|.+|......+..-        -...+|+++.+
T Consensus        87 ~~~v~~l~~~l~~AD~vIi~tP~Y~~~~--------~~~lKn~iD~~  125 (233)
T d2fzva1          87 HPAVKELRALSEWSEGQVWCSPERHGQI--------TSVMKAQIDHL  125 (233)
T ss_dssp             CHHHHHHHHHHHHCSEEEEEEEEETTEE--------CHHHHHHHHHS
T ss_pred             CHHHHHHHHHHhhcCeeEEEccccccCc--------HHHHHhhHHhc
Confidence            1134456667778999998876533222        22355778876

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.31  E-value=2  Score=32.74  Aligned_cols=37  Identities=16%  Similarity=0.255  Sum_probs=30.9

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRG   51 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~   51 (303)
                      .++++++|.|-| .|.+|+++++.|.+ .|.+|++++-+
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            356788999998 69999999999975 59999887654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=87.15  E-value=0.92  Score=32.79  Aligned_cols=30  Identities=17%  Similarity=0.235  Sum_probs=26.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      ||.|-| -|-||+.++|++++++.+|.++.-
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            688888 799999999999999988888754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.07  E-value=0.33  Score=37.28  Aligned_cols=33  Identities=21%  Similarity=0.344  Sum_probs=29.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      -|+|+|| |..|...+.+|.++|++|+++.+.+.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899997 99999999999999999999988643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.00  E-value=0.34  Score=37.80  Aligned_cols=37  Identities=16%  Similarity=0.202  Sum_probs=32.5

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      .++++++|.|-| .|.+|+++++.|.+.|.+|++++-+
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            356788999999 6999999999999999999988654

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.64  E-value=2.2  Score=32.20  Aligned_cols=62  Identities=18%  Similarity=0.147  Sum_probs=44.6

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHhC--------------------C-CeEEEeecCCCcccccchhcCCCCceEEEe
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGKQ--------------------G-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQP   72 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~--------------------g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~   72 (303)
                      .....++|+|+|+ |.++.-+++.|++.                    | .+|+++.|+......               
T Consensus        35 ~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~~~~~---------------   98 (225)
T d1cjca1          35 PDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVA---------------   98 (225)
T ss_dssp             CCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCC---------------
T ss_pred             ccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcChHhCC---------------
Confidence            3345789999996 99999999999983                    5 679999998653222               


Q ss_pred             cCCCCHHHHHHHhcccCEEEEc
Q psy4233          73 YHPRNDDEIRKAIKYSNVVINL   94 (303)
Q Consensus        73 ~Dl~d~~~~~~~~~~~D~vi~~   94 (303)
                         ..+..+.++.+..++.++.
T Consensus        99 ---ft~~Elre~~~~~~~~~~~  117 (225)
T d1cjca1          99 ---FTIKELREMIQLPGTRPML  117 (225)
T ss_dssp             ---CCHHHHHHHHTCTTEEEEC
T ss_pred             ---CCchhhhcccccCCCccee
Confidence               2455566666666665554

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.61  E-value=0.82  Score=32.68  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      ++.+|.|++.+|..|.-.+..+-+.|-++--++-
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~   35 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEE   35 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCCCH
Confidence            4678999999999999999999999987765543

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.16  E-value=0.78  Score=33.10  Aligned_cols=96  Identities=15%  Similarity=0.049  Sum_probs=51.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEE
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVV   91 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~v   91 (303)
                      ...++|+|+|. |.+|+..++.|.+..  ..+.+............      .....     .+   +++++.  ++|+|
T Consensus         5 ~~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~---~~e~l~~~~iD~V   69 (172)
T d1lc0a1           5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSL------DEVRQ-----IS---LEDALRSQEIDVA   69 (172)
T ss_dssp             CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEE------TTEEB-----CC---HHHHHHCSSEEEE
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHh------hccCc-----CC---HHHHHhCCCcchh
Confidence            34669999995 999999998887643  22333322222111111      11111     12   344554  47888


Q ss_pred             EEccccCc-cc---------cc---hhhhhhhcchHHHHHHHHHhcCC
Q psy4233          92 INLIGREF-AT---------KN---FTIADANVEIPARLARLSKEMGV  126 (303)
Q Consensus        92 i~~a~~~~-~~---------~~---~~~~~~n~~~~~~l~~~~~~~~~  126 (303)
                      +-+..... ..         ..   +.-...|+.-...+++++++.++
T Consensus        70 ~I~tp~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~  117 (172)
T d1lc0a1          70 YICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR  117 (172)
T ss_dssp             EECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred             hhcccccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCC
Confidence            77664311 00         00   01112466777788888888875

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.88  E-value=0.5  Score=35.44  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=27.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      |||++.| ++..|..+++.|+++|++|.++.-
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence            6899998 578899999999999999987654

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.88  E-value=5.3  Score=29.63  Aligned_cols=40  Identities=23%  Similarity=0.320  Sum_probs=32.4

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHH--------------------hCC-CeEEEeecCCCc
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLG--------------------KQG-SQIIIPYRGNFY   54 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll--------------------~~g-~~V~~~~R~~~~   54 (303)
                      ....+++|+|+|+ |.++.-+++.|+                    +.| .+|+++.|+...
T Consensus        35 ~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~   95 (216)
T d1lqta1          35 PDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL   95 (216)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred             ccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence            3456789999996 999999999888                    456 579999998653

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=85.82  E-value=1.9  Score=31.87  Aligned_cols=35  Identities=20%  Similarity=0.211  Sum_probs=23.3

Q ss_pred             EEEEEcCCChhHHHHHH-HHH---hC-----CCeEEEeecCCCc
Q psy4233          20 VATVFGASGYMGSYLCN-KLG---KQ-----GSQIIIPYRGNFY   54 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~-~Ll---~~-----g~~V~~~~R~~~~   54 (303)
                      .+.|.||||-+.+.-+- +|-   ..     +..|+++.|+..+
T Consensus         7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~   50 (195)
T d1h9aa1           7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALN   50 (195)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCC
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCc
Confidence            35578999999876332 332   22     3679999997644

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=85.42  E-value=0.32  Score=40.48  Aligned_cols=33  Identities=12%  Similarity=0.287  Sum_probs=25.0

Q ss_pred             cEEEEEcC------CChhH---HHHHHHHHhCCCeEEEeecC
Q psy4233          19 VVATVFGA------SGYMG---SYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        19 ~~vlVtGa------tG~iG---~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      ||||+++.      +|.+|   .+|+++|.++||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            68888653      34444   67899999999999998743

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.07  E-value=0.46  Score=36.36  Aligned_cols=78  Identities=14%  Similarity=0.098  Sum_probs=55.4

Q ss_pred             CcEEEEEc-CCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233          18 GVVATVFG-ASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG   96 (303)
Q Consensus        18 ~~~vlVtG-atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~   96 (303)
                      +++||=.| |+|+.-.++++..-.. ..|++++.++.............+.+..+..|..+++.+......+|+|++...
T Consensus        74 G~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~  152 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA  152 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred             CCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEcc
Confidence            67888777 4788888888866554 489999987543333323333446688999999998877666666898887543

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.71  E-value=0.56  Score=35.46  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCC
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNF   53 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~   53 (303)
                      .||+|+|| |--|...+.+|.+.  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999996 99999999999875  689999988643

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.47  E-value=3  Score=31.09  Aligned_cols=107  Identities=18%  Similarity=0.125  Sum_probs=64.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCC-cccccchhcCCCCceEEEecCC-------------------C
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHP-------------------R   76 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl-------------------~   76 (303)
                      ..||.|+|- |.-|..++..+.+.+.+ |-.+.-+.+ ......+     ....+..+.-                   .
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~-----~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e   88 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK-----ADKKILIGKKLTRGLGAGGNPKIGEEAAKE   88 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC-----CSEEEECCTTTTTTBCCTTCHHHHHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC-----cchhcccccccccccccccchHHHHHHHHH
Confidence            569999995 99999999999998742 433322221 1111110     1122222211                   1


Q ss_pred             CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233          77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD  138 (303)
Q Consensus        77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  138 (303)
                      +.+.+.+.++++|.||-+||.....        --.++.-+.+.+++.+..-+-+++....+
T Consensus        89 ~~~~I~~~l~~~d~vfi~AGlGGGT--------Gsgaapvia~~ake~g~lvv~ivtlPF~~  142 (209)
T d2vapa1          89 SAEEIKAAIQDSDMVFITCGLGGGT--------GTGSAPVVAEISKKIGALTVAVVTLPFVM  142 (209)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSSH--------HHHHHHHHHHHHHHTTCEEEEEEEECCGG
T ss_pred             HHHHHHHhccCCCEEEEEEeCCCCc--------cccHHHHHHHHHHHcCCcEEEEEecchhh
Confidence            3457888889999999999864321        12234468999999887555555544444

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=84.47  E-value=1.4  Score=35.71  Aligned_cols=73  Identities=10%  Similarity=0.168  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGK-QG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI   95 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~-~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a   95 (303)
                      .+++.|+| +|..+..-++++.+ .+ .+|++.+|++.+..+.........++++..++     +++++++++|+|+-+.
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADIi~t~T  201 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDIITTVT  201 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSEEEECC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCceeecc
Confidence            46899999 59999998888876 34 67999999765443333222233456666554     3667889999999776


Q ss_pred             c
Q psy4233          96 G   96 (303)
Q Consensus        96 ~   96 (303)
                      +
T Consensus       202 a  202 (340)
T d1x7da_         202 A  202 (340)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.81  E-value=0.51  Score=38.01  Aligned_cols=33  Identities=21%  Similarity=0.201  Sum_probs=28.7

Q ss_pred             EEEEEcCCChhHHHHHHHHH-----hCCCeEEEeecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLG-----KQGSQIIIPYRGNF   53 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll-----~~g~~V~~~~R~~~   53 (303)
                      -|+|+|| |..|..++..|.     +.|++|+++.|++.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899997 999999999996     47999999998653

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.69  E-value=1.6  Score=31.51  Aligned_cols=30  Identities=17%  Similarity=0.258  Sum_probs=24.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC----CeEEEee
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG----SQIIIPY   49 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~   49 (303)
                      |||.|=| -|-||+.++|++++++    .+|.++.
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaIN   35 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIN   35 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEE
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEc
Confidence            6899998 7999999999999743    4566654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.54  E-value=0.61  Score=37.35  Aligned_cols=33  Identities=21%  Similarity=0.165  Sum_probs=23.6

Q ss_pred             cEEEEEcC-C-Chh--HHHHHHHHHhCCCeEEEeecC
Q psy4233          19 VVATVFGA-S-GYM--GSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        19 ~~vlVtGa-t-G~i--G~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      |||+|++| | |.+  ..+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764 3 444  445889999999999887653

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=83.03  E-value=0.56  Score=38.27  Aligned_cols=31  Identities=32%  Similarity=0.507  Sum_probs=28.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG   51 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~   51 (303)
                      -|+|+| +|+-|..++..|.+.|++|.++-+-
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            478899 5999999999999999999999874

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.81  E-value=5.5  Score=27.34  Aligned_cols=63  Identities=19%  Similarity=0.034  Sum_probs=45.6

Q ss_pred             CcEEEEE-----cCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233          18 GVVATVF-----GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI   92 (303)
Q Consensus        18 ~~~vlVt-----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   92 (303)
                      ..||+|+     |-|-.+...|++.|-+.|++|.+..-...                    |..+...+..-+.++|.++
T Consensus         3 ~~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~~--------------------~~~~~~~~~~~l~~~d~ii   62 (148)
T d1vmea1           3 KGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDE--------------------ERPAISEILKDIPDSEALI   62 (148)
T ss_dssp             TTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSS--------------------CCCCHHHHHHHSTTCSEEE
T ss_pred             CCEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEecccc--------------------cccchhHhhhhHHHCCEeE
Confidence            3566664     77888999999999999998887654321                    2345566666788899998


Q ss_pred             EccccCcc
Q psy4233          93 NLIGREFA  100 (303)
Q Consensus        93 ~~a~~~~~  100 (303)
                      ........
T Consensus        63 igspt~~~   70 (148)
T d1vmea1          63 FGVSTYEA   70 (148)
T ss_dssp             EEECEETT
T ss_pred             EEecccCC
Confidence            88776443

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.71  E-value=0.62  Score=36.95  Aligned_cols=32  Identities=19%  Similarity=0.231  Sum_probs=29.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      -|+|+|| |..|...+..|.++|.+|+++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4999996 9999999999999999999998764

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=82.59  E-value=3.1  Score=29.92  Aligned_cols=30  Identities=10%  Similarity=0.182  Sum_probs=24.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC---CeEEEee
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQG---SQIIIPY   49 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~   49 (303)
                      |||.|-| -|-||+.++|+++++.   .+|.++.
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaIN   33 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIN   33 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEc
Confidence            5899998 7999999999998754   4666653

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.89  E-value=1.1  Score=28.59  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=26.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      |||||+|. |-=-.+|+..|.+..++++++.-
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEecC
Confidence            79999995 76788999999988899998743

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.89  E-value=0.98  Score=37.29  Aligned_cols=33  Identities=15%  Similarity=0.262  Sum_probs=29.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHh------CCCeEEEeecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGK------QGSQIIIPYRGNF   53 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~------~g~~V~~~~R~~~   53 (303)
                      -|+|+|| |--|...+..|.+      +|.+|.++.|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            4999997 9999999999986      7999999998753

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=81.62  E-value=5.3  Score=26.39  Aligned_cols=34  Identities=9%  Similarity=0.125  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233          17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR   50 (303)
Q Consensus        17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R   50 (303)
                      ++++|||+--.-.+...+...|.+.|++|.....
T Consensus         1 qp~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~   34 (118)
T d2b4aa1           1 QPFRVTLVEDEPSHATLIQYHLNQLGAEVTVHPS   34 (118)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCeEEECC
Confidence            3689999999999999999999999999987643

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.58  E-value=1.3  Score=34.05  Aligned_cols=37  Identities=19%  Similarity=0.406  Sum_probs=31.0

Q ss_pred             ccCCCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEeecC
Q psy4233          14 SSFNGVVATVFGASGYMGSYLCNKLGK-QGSQIIIPYRG   51 (303)
Q Consensus        14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~~R~   51 (303)
                      .+.++++|+|-|- |.+|+++++.|.+ .|.+|++++-.
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            3577899999995 9999999999986 48999887654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.39  E-value=5  Score=28.68  Aligned_cols=29  Identities=10%  Similarity=0.202  Sum_probs=23.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC---CeEEEee
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQG---SQIIIPY   49 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~   49 (303)
                      ||.|-| -|-||+.++|+++++.   .+|.++.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN   33 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN   33 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec
Confidence            788888 7999999999999743   6777764

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=81.31  E-value=7  Score=31.90  Aligned_cols=80  Identities=11%  Similarity=0.127  Sum_probs=54.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc----chhcCCCCceEEEecCCCCHH---HHHHHhccc
Q psy4233          16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD----LRLCGDLGQVLFQPYHPRNDD---EIRKAIKYS   88 (303)
Q Consensus        16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~   88 (303)
                      .++.||+=.+ +..-|-...+.|.+.|.+|+=+-+........    ..... -.+-+.+..|+.+++   .+.++++.+
T Consensus         9 L~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~-n~~K~si~ldl~~~~G~~~~~~Lv~~a   86 (402)
T d1xk7a1           9 LAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLS-RRNLHALSLNIFKDEGREAFLKLMETT   86 (402)
T ss_dssp             TTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHH-TTTCEEEEECTTSHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHh-CCCCeEEEEeCcCHHHHHHHHHHHhhc
Confidence            5677888766 45568888889999999999886543221111    11111 123578899998864   466788899


Q ss_pred             CEEEEcccc
Q psy4233          89 NVVINLIGR   97 (303)
Q Consensus        89 D~vi~~a~~   97 (303)
                      |+||++-..
T Consensus        87 Dv~i~n~rp   95 (402)
T d1xk7a1          87 DIFIEASKG   95 (402)
T ss_dssp             SEEEEECSS
T ss_pred             CCceeeecc
Confidence            999998654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.31  E-value=0.85  Score=35.66  Aligned_cols=32  Identities=25%  Similarity=0.265  Sum_probs=28.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGN   52 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~   52 (303)
                      -|+|+|| |.-|...+..|.++ |++|.++.+++
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            4999997 99999999999874 99999999875

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.22  E-value=0.83  Score=35.10  Aligned_cols=33  Identities=24%  Similarity=0.407  Sum_probs=30.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233          20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF   53 (303)
Q Consensus        20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~   53 (303)
                      .|+|+|| |-.|...+..|.++|.+|.++.+.+.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            5999997 99999999999999999999998753

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.82  E-value=0.66  Score=35.04  Aligned_cols=34  Identities=12%  Similarity=0.024  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~   52 (303)
                      +.||+|+|| |.-|-..+.+|.++|       ++|+++.+.+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            469999996 999999999999988       4799998865

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.74  E-value=2.4  Score=28.86  Aligned_cols=35  Identities=11%  Similarity=0.171  Sum_probs=31.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233          18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN   52 (303)
Q Consensus        18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~   52 (303)
                      ..||+|-|-||..|+.-+++.++-|.+|.+-+...
T Consensus        15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPg   49 (130)
T d1euca1          15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPG   49 (130)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccC
Confidence            45899999999999999999999999999877643

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=80.46  E-value=1.8  Score=32.86  Aligned_cols=74  Identities=7%  Similarity=-0.005  Sum_probs=40.2

Q ss_pred             CCCcEEEEEcCC---ChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--cc
Q psy4233          16 FNGVVATVFGAS---GYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YS   88 (303)
Q Consensus        16 ~~~~~vlVtGat---G~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   88 (303)
                      ..++||.|+|..   |++++.-+.++.+.  +.+++++.-...+..+........+....    ..|   ++++++  ++
T Consensus        14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~----~~~---~~~l~~~~~i   86 (237)
T d2nvwa1          14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATG----FDS---LESFAQYKDI   86 (237)
T ss_dssp             GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEE----ESC---HHHHHHCTTC
T ss_pred             CCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhccccccee----ecc---hhhccccccc
Confidence            456799999974   46777767777653  47888765433333222211111111111    123   444554  48


Q ss_pred             CEEEEccc
Q psy4233          89 NVVINLIG   96 (303)
Q Consensus        89 D~vi~~a~   96 (303)
                      |+|+-+..
T Consensus        87 D~V~i~tp   94 (237)
T d2nvwa1          87 DMIVVSVK   94 (237)
T ss_dssp             SEEEECSC
T ss_pred             ceeeccCC
Confidence            88887764