Psyllid ID: psy4241

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MSIYRVRKKKTDNGSLQNSPLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAGDHRDLHSFPTRRLKKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTSTPTKDDNSDCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Secondary Structure (PSIPRED)
ccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHHccccccccHHHHcccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccccccEccccccccccccccHHcccccccccccccccccHHHcccccHHHccccHHHHHcHHHHcHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHccccccccHHHcccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHcccEEEEEccccccEEEEccc
Coil and Loop (DISEMBL)
msiyrvrkkktdngslqnsplpeipephpdstasplssplnsarlspsspecargqsfwcedlasaascgatgHCIQAVWShmkvkedgddVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAagdhrdlhsfptrrlkkkkkrcllteetvtpkvlssqmnpdVVCSVAGLCNNAAIDRLLltaapapktstptkddnsdckncASFADLVTKKFnaaskqdvtndpfgsevlsqapwsgwhllvssy
Flexible Loop (DISEMBL)
msiyrvrkkktdngslqnspLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAagdhrdlhsfptrrlkkkkkrcllteetvtpkvlssqmnpDVVCSVAGLCNNAAIDRLLLTAAPApktstptkddnsdcKNCASFADLVTKKFNAASKQDVTNDPFGSevlsqapwsgwHLLVSSY
Low Complexity Region (SEG)
MSIYRVRKKKTDNGSLQNSPLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAGDHRDLHSFPTrrlkkkkkrcllTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRllltaapapktstptkDDNSDCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Disordered region (IsUnstruct)
*******************************************************QSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQ************DLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAG************************************NPDVVCSVAGLCNNAAIDRLLLTA******************NCASFADLVTKKF****************VLSQAPWSGWHLLV***
Disordered Region (DISOPRED)
****R*RKKKTDNGSLQNSPLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHC****************VCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAI************DLHSFPTRRLKKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDR*******************SDCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Disordered Region (DISEMBL)
*****************NSPLPEIP****************************RGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAGDHRDLHSFPTRRLKKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAP***********DCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Disordered Region (DISPRO)
*SIYRVRKKKTDNGSLQNSPLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAGDHRDLHSFPTRRLKKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAP********KDDNSDCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSIYRVRKKKTDNGSLQNSPLPEIPEPHPDSTASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAGDHRDLHSFPTRRLKKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTSTPTKDDNSDCKNCASFADLVTKKFNAASKQDVTNDPFGSEVLSQAPWSGWHLLVSSY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	305	2.2.26 [Sep-21-2011]
P50405	377	Pulmonary surfactant-asso	yes	N/A	0.403	0.326	0.338	1e-19
P22355	376	Pulmonary surfactant-asso	yes	N/A	0.403	0.327	0.330	3e-19
P15781	373	Pulmonary surfactant-asso	yes	N/A	0.370	0.302	0.350	3e-18
P26779	525	Proactivator polypeptide	no	N/A	0.429	0.249	0.357	4e-18
P17129	363	Pulmonary surfactant-asso	no	N/A	0.406	0.341	0.312	2e-17
P07988	381	Pulmonary surfactant-asso	yes	N/A	0.409	0.328	0.310	2e-17
P07602	524	Proactivator polypeptide	yes	N/A	0.380	0.221	0.341	3e-17
P15285	370	Pulmonary surfactant-asso	yes	N/A	0.406	0.335	0.312	2e-16
O13035	518	Proactivator polypeptide	yes	N/A	0.380	0.223	0.325	2e-14
Q61207	557	Sulfated glycoprotein 1 O	no	N/A	0.377	0.206	0.327	3e-13

>sp|P50405|PSPB_MOUSE Pulmonary surfactant-associated protein B OS=Mus musculus GN=Sftpb PE=2 SV=1

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 41  NSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMV 100
            +A  S SS ECA+G  FWC+ L  A  C A GHC+Q VW H       +D+C+ C+++V
Sbjct: 20  GAAITSASSLECAQGPQFWCQSLEHAVQCRALGHCLQEVWGH----AGANDLCQECEDIV 75

Query: 101 GQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVV 160
                  + +  Q+ ++   E  C+++P+K++   C +++D ++P +I+   SQ+NP  +
Sbjct: 76  HLLTKMTKEDAFQEAIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQSQINPKAI 135

Query: 161 CSVAGLC 167
           C+  GLC
Sbjct: 136 CNHVGLC 142

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.
Mus musculus (taxid: 10090)

>sp|P22355|PSPB_RAT Pulmonary surfactant-associated protein B OS=Rattus norvegicus GN=Sftpb PE=2 SV=1

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 41  NSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMV 100
            +A  S SSP+CA+G  FWC+ L  A  C A GHC+Q VW H       +D+C+ C+++V
Sbjct: 19  GAATESASSPDCAQGPKFWCQSLEQAIQCRALGHCLQEVWGH----AGANDLCQECEDIV 74

Query: 101 GQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVV 160
                  + +  Q  ++   E  C+++P+K++   C +++D ++P +I+    Q+ P  +
Sbjct: 75  HLLTKMTKEDAFQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQGQIKPKAI 134

Query: 161 CSVAGLC 167
           CS  GLC
Sbjct: 135 CSHVGLC 141

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.

Rattus norvegicus (taxid: 10116)

>sp|P15781|PSPB_BOVIN Pulmonary surfactant-associated protein B OS=Bos taurus GN=SFTPB PE=1 SV=3

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)

Query: 52  CARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNE 111
           CA+G  FWC+ L  A  C A GHC+Q VW H+    + DD+C+ C+N+        +   
Sbjct: 31  CAQGPEFWCQSLEQALQCRALGHCLQEVWGHV----EADDLCQECENISRLLTKMAKEAI 86

Query: 112 TQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN 168
            Q  ++   E  C+++P+K++   C  L+D + P +IE   S MNP  +C   GLC 
Sbjct: 87  FQDSVRKFLEQECDVLPLKLLAPLCRHLLDTYFPLIIEHFQSHMNPKFICQHVGLCK 143

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.

Bos taurus (taxid: 9913)

>sp|P26779|SAP_BOVIN Proactivator polypeptide OS=Bos taurus GN=PSAP PE=1 SV=3

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 6/137 (4%)

Query: 36  LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
           L+S L  A  SP     EC RG + WC+++ +AA CGA  HC+Q VWS   VK      C
Sbjct: 7   LASLLGGALASPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKSLP---C 63

Query: 94  KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
            ICK+++  A + L+ N T+Q++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct: 64  DICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKG 123

Query: 154 QM-NPDVVCSVAGLCNN 169
           QM +P  VCS   LC +
Sbjct: 124 QMSHPGEVCSALNLCES 140

Saposin-D is a specific sphingomyelin phosphodiesterase activator (EC 3.1.4.12).

Bos taurus (taxid: 9913)

>sp|P17129|PSPB_CANFA Pulmonary surfactant-associated protein B (Fragment) OS=Canis familiaris GN=SFTPB PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 41  NSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMV 100
            +A  S  S  CARG +FWC+ L  A  C A GHC+Q VW + +     DD+C+ C+++V
Sbjct: 14  GAADWSAPSLACARGPAFWCQSLEQALQCRALGHCLQEVWGNAR----ADDLCQECQDIV 69

Query: 101 GQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVV 160
                  +    Q  ++   E  C+++P+K++   C  ++  + P +++   SQ+NP ++
Sbjct: 70  RILTKMTKEAIFQDMVRKFLEHECDVLPLKLLTPQCHHMLGTYFPVVVDYFQSQINPKII 129

Query: 161 CSVAGLCN 168
           C   GLC 
Sbjct: 130 CKHLGLCK 137

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.

Canis familiaris (taxid: 9615)

>sp|P07988|PSPB_HUMAN Pulmonary surfactant-associated protein B OS=Homo sapiens GN=SFTPB PE=1 SV=3

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 41  NSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMV 100
            +A  + SS  CA+G  FWC+ L  A  C A GHC+Q VW H+      DD+C+ C+++V
Sbjct: 21  GTAAWTTSSLACAQGPEFWCQSLEQALQCRALGHCLQEVWGHV----GADDLCQECEDIV 76

Query: 101 GQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVV 160
                  +    Q  ++   E  CN++P+K++   C++++D++ P +I+   +Q + + +
Sbjct: 77  HILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNGI 136

Query: 161 CSVAGLCNN 169
           C   GLC +
Sbjct: 137 CMHLGLCKS 145

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.

Homo sapiens (taxid: 9606)

>sp|P07602|SAP_HUMAN Proactivator polypeptide OS=Homo sapiens GN=PSAP PE=1 SV=2

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 4/120 (3%)

Query: 51  ECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSN 110
           EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C ICK++V  A D L+ N
Sbjct: 24  ECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP---CDICKDVVTAAGDMLKDN 80

Query: 111 ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMN-PDVVCSVAGLCNN 169
            T++++    E +C+ +P   +   C ++VD ++P +++++  +M+ P  VCS   LC +
Sbjct: 81  ATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCES 140

Saposin-D is a specific sphingomyelin phosphodiesterase activator (EC 3.1.4.12).

Homo sapiens (taxid: 9606)

>sp|P15285|PSPB_RABIT Pulmonary surfactant-associated protein B OS=Oryctolagus cuniculus GN=SFTPB PE=2 SV=2

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 41  NSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMV 100
            +A  + S   CA+G  FWC+ L  A  C A GHC+Q VW H+      DD+C+ C+++V
Sbjct: 22  GTAVWATSPLACAQGPEFWCQSLEQALQCKALGHCLQEVWGHV----GADDLCQECQDIV 77

Query: 101 GQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVV 160
                  +    Q  ++   E  C+++P+K++   C  ++D + P  I    SQ+N   +
Sbjct: 78  NILTKMTKEAIFQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQINAKAI 137

Query: 161 CSVAGLCN 168
           C   GLC 
Sbjct: 138 CQHLGLCQ 145

Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.

Oryctolagus cuniculus (taxid: 9986)

>sp|O13035|SAP_CHICK Proactivator polypeptide OS=Gallus gallus GN=PSAP PE=1 SV=1

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 51  ECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSN 110
           +CA+G   WC+ L +A+ CGA  HC Q VWS   V     D+CK    +VG+    L+ N
Sbjct: 25  DCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV---LKDN 81

Query: 111 ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMN-PDVVCSVAGLCNN 169
            T+ ++++  E  C  +P + +   C ++VD ++P +++++  + + P+VVCS   LC +
Sbjct: 82  GTEDEIRSYLEKRCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQS 141

Saposin-D is a specific sphingomyelin phosphodiesterase activator (EC 3.1.4.12).

Gallus gallus (taxid: 9031)

>sp|Q61207|SAP_MOUSE Sulfated glycoprotein 1 OS=Mus musculus GN=Psap PE=1 SV=2

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 52  CARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNE 111
           C+ G +  C D+ +A  CGA  HC Q VWS    K      C ICK +V +A + L+ N 
Sbjct: 25  CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLP---CDICKTVVTEAGNLLKDNA 81

Query: 112 TQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQM-NPDVVCSVAGLCNN 169
           TQ+++    E +C  +    +   C ++VD ++P +++++  +M NP  VCS   LC +
Sbjct: 82  TQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQS 140

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
157133746	1017	saposin [Aedes aegypti] gi|108881499|gb|	0.475	0.142	0.589	2e-45
307212700	873	Proactivator polypeptide [Harpegnathos s	0.475	0.166	0.621	4e-44
347965100	1006	AGAP001082-PA [Anopheles gambiae str. PE	0.406	0.123	0.562	4e-44
347965098	1007	AGAP001082-PB [Anopheles gambiae str. PE	0.406	0.123	0.562	4e-44
156550309	1113	PREDICTED: hypothetical protein LOC10011	0.449	0.123	0.611	2e-43
380021763	885	PREDICTED: proactivator polypeptide-like	0.468	0.161	0.541	2e-42
328782499	887	PREDICTED: proactivator polypeptide isof	0.468	0.161	0.547	3e-42
307166380	2140	Proactivator polypeptide [Camponotus flo	0.409	0.058	0.617	3e-42
322793852	886	hypothetical protein SINV_15287 [Solenop	0.409	0.141	0.658	7e-42
112984026	965	saposin-related precursor [Bombyx mori]	0.403	0.127	0.626	1e-41

>gi|157133746|ref|XP_001662994.1| saposin [Aedes aegypti] gi|108881499|gb|EAT45724.1| AAEL003046-PA [Aedes aegypti]

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 111/146 (76%), Gaps = 1/146 (0%)

Query: 32  TASPLSSPLNSA-RLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGD 90
           T S  +SP+ +  R    + EC  G ++WC +L +A +CGA  HCIQ VW   K   D D
Sbjct: 15  TTSTWASPVETGGRRLVGAKECTWGPTYWCSNLKNAKNCGAVTHCIQTVWEKQKYPVDND 74

Query: 91  DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEV 150
           ++C IC +MV QARDQL+SNETQ DLKAVFEGSCNL+P+KV+R+ C K+ D+F+PEL+E 
Sbjct: 75  EICNICLDMVKQARDQLESNETQADLKAVFEGSCNLIPIKVVRKECKKMADDFIPELVEA 134

Query: 151 LSSQMNPDVVCSVAGLCNNAAIDRLL 176
           L+SQMNP+VVCSVAGLCNNAAID++L
Sbjct: 135 LASQMNPNVVCSVAGLCNNAAIDKML 160

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212700|gb|EFN88386.1| Proactivator polypeptide [Harpegnathos saltator]

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 109/148 (73%), Gaps = 3/148 (2%)

Query: 31  STASPL--SSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKED 88
           STA+ +  + P NS  L     EC  G S+WCE+L +A  CGA  HCIQ  W  M+V ED
Sbjct: 15  STANVIITAEPQNSHSLL-GKDECTWGPSYWCENLKTAKGCGAVKHCIQQYWKQMEVPED 73

Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
            D VC ICK+MV QARDQL+SN+TQQDLK VFEGSC L+ +K I + C K+VDEFVPEL+
Sbjct: 74  TDSVCGICKDMVQQARDQLESNQTQQDLKDVFEGSCKLIHIKPIVDECIKIVDEFVPELV 133

Query: 149 EVLSSQMNPDVVCSVAGLCNNAAIDRLL 176
           E L+SQMNP VVCSVAGLCNNA ID+LL
Sbjct: 134 ETLASQMNPSVVCSVAGLCNNAHIDKLL 161

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347965100|ref|XP_317975.4| AGAP001082-PA [Anopheles gambiae str. PEST] gi|333469497|gb|EAA13115.5| AGAP001082-PA [Anopheles gambiae str. PEST]

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 81/144 (56%), Positives = 107/144 (74%)

Query: 33  ASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDV 92
           +SP+   +N  +    + EC  G S+WC ++ +A +C A  HCIQ VW       D D++
Sbjct: 21  SSPVKQTINGNKSLLGAKECTWGPSYWCSNIENAKTCAAVSHCIQTVWEKQHYPVDNDEI 80

Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C IC +MV QARDQL+SNETQ DLKAVFEGSCNL+P+K++++ C KL D+F+PEL+E L+
Sbjct: 81  CNICLDMVKQARDQLESNETQADLKAVFEGSCNLIPIKLVKKECRKLADDFIPELVEALA 140

Query: 153 SQMNPDVVCSVAGLCNNAAIDRLL 176
           SQMNP+ VCSVAGLCNNAAID+LL
Sbjct: 141 SQMNPNAVCSVAGLCNNAAIDKLL 164

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347965098|ref|XP_003437209.1| AGAP001082-PB [Anopheles gambiae str. PEST] gi|333469498|gb|EGK97311.1| AGAP001082-PB [Anopheles gambiae str. PEST]

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 81/144 (56%), Positives = 107/144 (74%)

Query: 33  ASPLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDV 92
           +SP+   +N  +    + EC  G S+WC ++ +A +C A  HCIQ VW       D D++
Sbjct: 21  SSPVKQTINGNKSLLGAKECTWGPSYWCSNIENAKTCAAVSHCIQTVWEKQHYPVDNDEI 80

Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C IC +MV QARDQL+SNETQ DLKAVFEGSCNL+P+K++++ C KL D+F+PEL+E L+
Sbjct: 81  CNICLDMVKQARDQLESNETQADLKAVFEGSCNLIPIKLVKKECRKLADDFIPELVEALA 140

Query: 153 SQMNPDVVCSVAGLCNNAAIDRLL 176
           SQMNP+ VCSVAGLCNNAAID+LL
Sbjct: 141 SQMNPNAVCSVAGLCNNAAIDKLL 164

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550309|ref|XP_001603446.1| PREDICTED: hypothetical protein LOC100119722 [Nasonia vitripennis]

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/139 (61%), Positives = 107/139 (76%), Gaps = 2/139 (1%)

Query: 52  CARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNE 111
           C  G S+WC++L +AA C AT HCI  VW  M+V ED D VC++CK+MV QARDQL+SN+
Sbjct: 37  CTWGPSYWCQNLTTAAGCNATKHCIPKVWEKMQVPEDHDSVCQVCKDMVQQARDQLESNQ 96

Query: 112 TQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAA 171
           TQ+DLKAVFEGSC L+ +K I + CDKLVD+F+PEL+E L+SQMNP VVCSVAGLCN+A 
Sbjct: 97  TQEDLKAVFEGSCALIYIKPIVKECDKLVDQFIPELVETLASQMNPSVVCSVAGLCNSAH 156

Query: 172 IDRLL--LTAAGDHRDLHS 188
           ID+LL   T    ++ L S
Sbjct: 157 IDKLLEEYTEQSQNKKLQS 175

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021763|ref|XP_003694726.1| PREDICTED: proactivator polypeptide-like [Apis florea]

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 106/146 (72%)

Query: 51  ECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSN 110
           EC  G S+WCE++ +A+ C AT HCI  VW HMKV  D D VC ICK+MV QA DQL+SN
Sbjct: 35  ECTWGPSYWCENIKTASGCNATKHCIDKVWKHMKVPNDDDSVCTICKDMVQQAHDQLESN 94

Query: 111 ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNA 170
           +TQ+D+K+VFEGSC L+ +K I + C  +VD+F+PEL+E L+SQMNP +VCSVAGLCN+A
Sbjct: 95  QTQEDIKSVFEGSCKLIHIKPIVKECITIVDQFIPELVETLASQMNPSIVCSVAGLCNSA 154

Query: 171 AIDRLLLTAAGDHRDLHSFPTRRLKK 196
            ID L++       ++    +R L+K
Sbjct: 155 HIDELIVKYESSKPEIKELKSRSLEK 180

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782499|ref|XP_392338.3| PREDICTED: proactivator polypeptide isoform 1 [Apis mellifera]

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/146 (54%), Positives = 105/146 (71%)

Query: 51  ECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSN 110
           EC  G S+WCE++ +A+ C AT HCI  VW HMKV  D D VC ICK+MV QA DQL+SN
Sbjct: 35  ECTWGPSYWCENIKTASGCNATKHCIDKVWKHMKVPNDDDSVCTICKDMVQQAHDQLESN 94

Query: 111 ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNA 170
           +TQ+D+K VFEGSC L+ +K I + C  +VD+F+PELIE L+SQMNP +VCSVAGLCN+A
Sbjct: 95  QTQEDIKNVFEGSCKLIHIKPIVKECITIVDQFIPELIETLASQMNPSIVCSVAGLCNSA 154

Query: 171 AIDRLLLTAAGDHRDLHSFPTRRLKK 196
            ID L++       ++    +R L+K
Sbjct: 155 HIDELIVKYESSKPEIKELKSRSLEK 180

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166380|gb|EFN60517.1| Proactivator polypeptide [Camponotus floridanus]

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 79/128 (61%), Positives = 98/128 (76%)

Query: 49  SPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQ 108
           S EC+ G S+WCE+L +A  C A  HCI   W  M+V ED D+VC ICK+MV QARDQL+
Sbjct: 34  SDECSWGPSYWCENLKTAKGCNAVNHCIHRYWEQMEVPEDNDNVCGICKDMVQQARDQLE 93

Query: 109 SNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN 168
           SN+TQQ+LK VFEGSC L+ +  I + C K+VD+F+PEL+E L+SQMNP VVCSVAGLCN
Sbjct: 94  SNQTQQELKDVFEGSCKLIHIDPIVKECIKIVDQFIPELVETLASQMNPSVVCSVAGLCN 153

Query: 169 NAAIDRLL 176
           NA  D+LL
Sbjct: 154 NAHFDKLL 161

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322793852|gb|EFZ17192.1| hypothetical protein SINV_15287 [Solenopsis invicta]

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 1/126 (0%)

Query: 51  ECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSN 110
           EC  G S+WCE+L +A  C A  HCI   W  M+V ED DDVC ICK+MV QARDQL+SN
Sbjct: 46  ECTWGPSYWCENLKTAKGCSAVSHCIHR-WETMEVPEDNDDVCGICKDMVKQARDQLESN 104

Query: 111 ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNA 170
           +TQQDLK VFEGSC L+ +K I E C K+VD+F+PEL+E L+SQMNP VVCSVAGLCNNA
Sbjct: 105 QTQQDLKDVFEGSCKLIHIKPIVEECIKIVDQFIPELVETLASQMNPGVVCSVAGLCNNA 164

Query: 171 AIDRLL 176
            ID+LL
Sbjct: 165 HIDKLL 170

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112984026|ref|NP_001036831.1| saposin-related precursor [Bombyx mori] gi|2575865|dbj|BAA23126.1| BmP109 [Bombyx mori]

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 95/126 (75%)

Query: 52  CARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQSNE 111
           C  G S+WC + ++   C AT HCI  VWS M   ED D++C+IC +MV QARDQLQSNE
Sbjct: 176 CTWGPSYWCSNFSTGRECNATPHCINRVWSKMTFPEDNDNICQICLDMVKQARDQLQSNE 235

Query: 112 TQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAA 171
           TQ ++K VFEGSC L+P+K + EGC KL DEFV ELIE L+S+MNP  VCSVAGLCNNA 
Sbjct: 236 TQDEIKEVFEGSCKLIPIKFVAEGCMKLADEFVVELIETLASEMNPQAVCSVAGLCNNAK 295

Query: 172 IDRLLL 177
           IDRLL+
Sbjct: 296 IDRLLV 301

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
FB|FBgn0000416	953	Sap-r "Saposin-related" [Droso	0.416	0.133	0.582	5.1e-41
UNIPROTKB|E2RLF1	524	PSAP "Uncharacterized protein"	0.429	0.25	0.357	1.9e-23
UNIPROTKB|F1SU97	524	PSAP "Saposin-B-Val" [Sus scro	0.429	0.25	0.343	4.7e-23
UNIPROTKB|I3LS26	527	PSAP "Saposin-B-Val" [Sus scro	0.429	0.248	0.343	4.9e-23
UNIPROTKB|P26779	525	PSAP "Proactivator polypeptide	0.429	0.249	0.357	9.1e-23
UNIPROTKB|P07602	524	PSAP "Proactivator polypeptide	0.429	0.25	0.335	1.2e-22
UNIPROTKB|C9JIZ6	526	PSAP "Saposin-D" [Homo sapiens	0.429	0.249	0.335	1.2e-22
UNIPROTKB|F1MXP8	525	PSAP "Proactivator polypeptide	0.429	0.249	0.357	1.5e-22
UNIPROTKB|B1AVU8	559	PSAP "Saposin-D" [Homo sapiens	0.429	0.234	0.335	1.7e-22
RGD|621700	376	Sftpb "surfactant protein B" [	0.422	0.343	0.330	2e-21

FB|FBgn0000416 Sap-r "Saposin-related" [Drosophila melanogaster (taxid:7227)]

 Score = 423 (154.0 bits), Expect = 5.1e-41, Sum P(2) = 5.1e-41
 Identities = 74/127 (58%), Positives = 97/127 (76%)

Query:    49 SPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCKICKNMVGQARDQLQ 108
             S +C  G S+WC + +++  C AT HCIQ VW   KV  D D +C ICK+MV QARDQL+
Sbjct:    28 SSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQARDQLK 87

Query:   109 SNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN 168
             SN+T+++LK VFEGSC L+P+K I++ C K+ D+F+PEL+E L+SQMNPD VCSVAGLCN
Sbjct:    88 SNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMNPDQVCSVAGLCN 147

Query:   169 NAAIDRL 175
             +A ID L
Sbjct:   148 SARIDEL 154

GO:0005764 "lysosome" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0033227 "dsRNA transport" evidence=IMP

GO:0045169 "fusome" evidence=IDA

UNIPROTKB|E2RLF1 PSAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 255 (94.8 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
 Identities = 49/137 (35%), Positives = 80/137 (58%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L +A  SP     EC RG + WC+++ +AA CGA  HC+Q VW+   VK      C
Sbjct:     7 LASLLGAALASPVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK+++  A D L+ N T+Q++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             QM+ P  VCS   LC +
Sbjct:   124 QMSHPGEVCSALNLCES 140

GO:0071310 "cellular response to organic substance" evidence=IEA

GO:0060742 "epithelial cell differentiation involved in prostate gland development" evidence=IEA

GO:0060736 "prostate gland growth" evidence=IEA

GO:0043408 "regulation of MAPK cascade" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|F1SU97 PSAP "Saposin-B-Val" [Sus scrofa (taxid:9823)]

 Score = 243 (90.6 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
 Identities = 47/137 (34%), Positives = 78/137 (56%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+  L +A  SP     EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C
Sbjct:     7 LAGLLGAALASPVLGLRECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK+++  A D L+ N T+Q++    E +C+ +P   +   C ++VD + P +++++  
Sbjct:    64 DICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             QM+ P  VCS   LC +
Sbjct:   124 QMSKPGEVCSALNLCES 140

GO:0005615 "extracellular space" evidence=IDA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|I3LS26 PSAP "Saposin-B-Val" [Sus scrofa (taxid:9823)]

 Score = 243 (90.6 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
 Identities = 47/137 (34%), Positives = 78/137 (56%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+  L +A  SP     EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C
Sbjct:     7 LAGLLGAALASPVLGLRECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK+++  A D L+ N T+Q++    E +C+ +P   +   C ++VD + P +++++  
Sbjct:    64 DICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             QM+ P  VCS   LC +
Sbjct:   124 QMSKPGEVCSALNLCES 140

GO:0071310 "cellular response to organic substance" evidence=IEA

GO:0060742 "epithelial cell differentiation involved in prostate gland development" evidence=IEA

GO:0060736 "prostate gland growth" evidence=IEA

GO:0043408 "regulation of MAPK cascade" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|P26779 PSAP "Proactivator polypeptide" [Bos taurus (taxid:9913)]

 Score = 249 (92.7 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
 Identities = 49/137 (35%), Positives = 79/137 (57%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L  A  SP     EC RG + WC+++ +AA CGA  HC+Q VWS   VK      C
Sbjct:     7 LASLLGGALASPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK+++  A + L+ N T+Q++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             QM+ P  VCS   LC +
Sbjct:   124 QMSHPGEVCSALNLCES 140

GO:0005764 "lysosome" evidence=IEA

GO:0071310 "cellular response to organic substance" evidence=IEA

GO:0060742 "epithelial cell differentiation involved in prostate gland development" evidence=IEA

GO:0060736 "prostate gland growth" evidence=IEA

GO:0043408 "regulation of MAPK cascade" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

UNIPROTKB|P07602 PSAP "Proactivator polypeptide" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
 Identities = 46/137 (33%), Positives = 79/137 (57%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L +A   P     EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C
Sbjct:     7 LASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK++V  A D L+ N T++++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             +M+ P  VCS   LC +
Sbjct:   124 EMSRPGEVCSALNLCES 140

GO:0005739 "mitochondrion" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0043408 "regulation of MAPK cascade" evidence=IEA

GO:0060736 "prostate gland growth" evidence=IEA

GO:0060742 "epithelial cell differentiation involved in prostate gland development" evidence=IEA

GO:0071310 "cellular response to organic substance" evidence=IEA

GO:0006869 "lipid transport" evidence=TAS

GO:0008047 "enzyme activator activity" evidence=TAS

GO:0008289 "lipid binding" evidence=TAS

GO:0016021 "integral to membrane" evidence=TAS

GO:0002576 "platelet degranulation" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0005765 "lysosomal membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0006687 "glycosphingolipid metabolic process" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0043202 "lysosomal lumen" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005615 "extracellular space" evidence=ISS;IDA

GO:0043085 "positive regulation of catalytic activity" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|C9JIZ6 PSAP "Saposin-D" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
 Identities = 46/137 (33%), Positives = 79/137 (57%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L +A   P     EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C
Sbjct:     7 LASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK++V  A D L+ N T++++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             +M+ P  VCS   LC +
Sbjct:   124 EMSRPGEVCSALNLCES 140

GO:0005764 "lysosome" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F1MXP8 PSAP "Proactivator polypeptide" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
 Identities = 49/137 (35%), Positives = 79/137 (57%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L  A  SP     EC RG + WC+++ +AA CGA  HC+Q VWS   VK      C
Sbjct:     7 LASLLGGALASPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK+++  A + L+ N T+Q++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVIIAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             QM+ P  VCS   LC +
Sbjct:   124 QMSHPGEVCSALNLCES 140

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|B1AVU8 PSAP "Saposin-D" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
 Identities = 46/137 (33%), Positives = 79/137 (57%)

Query:    36 LSSPLNSARLSP--SSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVC 93
             L+S L +A   P     EC RG + WC+++ +A+ CGA  HC+Q VW+   VK      C
Sbjct:     7 LASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP---C 63

Query:    94 KICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSS 153
              ICK++V  A D L+ N T++++    E +C+ +P   +   C ++VD ++P +++++  
Sbjct:    64 DICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKG 123

Query:   154 QMN-PDVVCSVAGLCNN 169
             +M+ P  VCS   LC +
Sbjct:   124 EMSRPGEVCSALNLCES 140

GO:0005764 "lysosome" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

RGD|621700 Sftpb "surfactant protein B" [Rattus norvegicus (taxid:10116)]

 Score = 251 (93.4 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 44/133 (33%), Positives = 74/133 (55%)

Query:    35 PLSSPLNSARLSPSSPECARGQSFWCEDLASAASCGATGHCIQAVWSHMKVKEDGDDVCK 94
             P    L +A  S SSP+CA+G  FWC+ L  A  C A GHC+Q VW H       +D+C+
Sbjct:    13 PTLCSLGAATESASSPDCAQGPKFWCQSLEQAIQCRALGHCLQEVWGHA----GANDLCQ 68

Query:    95 ICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQ 154
              C+++V       + +  Q  ++   E  C+++P+K++   C +++D ++P +I+    Q
Sbjct:    69 ECEDIVHLLTKMTKEDAFQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQGQ 128

Query:   155 MNPDVVCSVAGLC 167
             + P  +CS  GLC
Sbjct:   129 IKPKAICSHVGLC 141

GO:0001666 "response to hypoxia" evidence=IEP

GO:0003674 "molecular_function" evidence=ND

GO:0005615 "extracellular space" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005764 "lysosome" evidence=IEA

GO:0005771 "multivesicular body" evidence=IDA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0033189 "response to vitamin A" evidence=IEP

GO:0050828 "regulation of liquid surface tension" evidence=TAS

GO:0051384 "response to glucocorticoid stimulus" evidence=IEP

GO:0055093 "response to hyperoxia" evidence=IEP

GO:0070741 "response to interleukin-6" evidence=IEP

GO:0070848 "response to growth factor stimulus" evidence=IEP

GO:0070849 "response to epidermal growth factor stimulus" evidence=IEP

GO:0071260 "cellular response to mechanical stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0097208 "alveolar lamellar body" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	305
smart00741	76	smart00741, SapB, Saposin (B) Domains	2e-17
pfam02199	34	pfam02199, SapA, Saposin A-type domain	3e-10
smart00162	34	smart00162, SAPA, Saposin/surfactant protein-B A-t	1e-08
pfam03489	35	pfam03489, SapB_2, Saposin-like type B, region 2	2e-07
pfam05184	39	pfam05184, SapB_1, Saposin-like type B, region 1	2e-06

>gnl|CDD|214797 smart00741, SapB, Saposin (B) Domains

 Score = 74.8 bits (184), Expect = 2e-17
 Identities = 24/77 (31%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 91  DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEV 150
            +C++C+ +V Q  + L+ N+T++++K   E  C  +P  +  + C + VD++ PE+I++
Sbjct: 1   LLCELCEFVVKQLENLLKDNKTEEEIKKALEKVCKKLPKSLSDQ-CKEFVDQYGPEIIDL 59

Query: 151 LSSQMNPDVVCSVAGLC 167
           L   ++P  VC   GLC
Sbjct: 60  LEQGLDPKDVCQKLGLC 76

Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present. Length = 76

>gnl|CDD|202150 pfam02199, SapA, Saposin A-type domain

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 49 SPECARGQSFWCEDLASAASCGATGHCIQAVWS 81
          + EC  G S+WC++L +A  C A  HC Q VW+
Sbjct: 2  TDECTWGPSYWCQNLETAKQCNAVEHCQQTVWN 34

Length = 34

>gnl|CDD|128465 smart00162, SAPA, Saposin/surfactant protein-B A-type DOMAIN

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 51 ECARGQSFWCEDLASAASCGATGHCIQAVWS 81
           C  G S WC++L +A+ C A  HC+Q VWS
Sbjct: 4  RCTWGPSVWCQNLETASQCNAVKHCLQRVWS 34

Present as four and three degenerate copies, respectively, in prosaposin and surfactant protein B. Single copies in acid sphingomyelinase, NK-lysin amoebapores and granulysin. Putative phospholipid membrane binding domains. Length = 34

>gnl|CDD|112314 pfam03489, SapB_2, Saposin-like type B, region 2

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 133 REGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167
            + C + VD++ P +I++L S ++P  VCS  GLC
Sbjct: 1   SDQCKQFVDQYGPLIIDLLVSGLDPKEVCSQLGLC 35

Length = 35

>gnl|CDD|191220 pfam05184, SapB_1, Saposin-like type B, region 1

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 24/39 (61%)

Query: 90  DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP 128
            D+C +C+ +V +    L+ N+T++++    E  C+L+P
Sbjct: 1   GDLCDLCEFLVKEVEKLLKDNKTEEEIIEALEKVCDLLP 39

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
KOG1340|consensus	218		99.79
smart00741	76	SapB Saposin (B) Domains. Present in multiple copi	99.49
KOG1340|consensus	218		99.3
smart00162	34	SAPA Saposin/surfactant protein-B A-type DOMAIN. P	99.18
PF02199	34	SapA: Saposin A-type domain; InterPro: IPR003119 S	99.02
PF03489	35	SapB_2: Saposin-like type B, region 2; InterPro: I	98.85
PF03489	35	SapB_2: Saposin-like type B, region 2; InterPro: I	98.63
PF05184	39	SapB_1: Saposin-like type B, region 1; InterPro: I	98.62
smart00741	76	SapB Saposin (B) Domains. Present in multiple copi	97.49
PF05184	39	SapB_1: Saposin-like type B, region 1; InterPro: I	96.84
KOG3770|consensus	577		85.72
PF11938	151	DUF3456: TLR4 regulator and MIR-interacting MSAP;	81.02

>KOG1340|consensus

Probab=99.79  E-value=3.5e-19  Score=160.45  Aligned_cols=142  Identities=25%  Similarity=0.448  Sum_probs=115.4

Q ss_pred             CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      ..+..|+.|+.+|+.+..++.++  +.+|++.|+..|+.+|. ....+|..||+.|+|.||+.+.++++|+.||+.+++|
T Consensus        34 r~~~~C~lCe~~v~~i~~~~~~~--~~~i~~~l~~~Ckkl~~-~~~~~C~~fv~~y~~~ii~~l~~~~~P~~vC~~l~lC  110 (218)
T KOG1340|consen   34 RSAEVCELCELVVKRIQEYLDKN--QNELKEDLHAECKKLPK-AIPFECLSFVDSYLDPIIKELESGTAPEDVCKKLNLC  110 (218)
T ss_pred             CccchhHHHHHHHHHHHHhhccc--HHHHHHHHHHHHHHhcc-cchHHHHHHHHHhhhHHHHHHHhccCHHHHHHHhccC
Confidence            34778999999999999999997  89999999999999996 3444999999999999999999999999999999999


Q ss_pred             cCcchhhh-----------------hhhhccccccc-cc----------cccccc---hHHHHHHHHhhhchHHHHHhcC
Q psy4241         168 NNAAIDRL-----------------LLTAAGDHRDL-HS----------FPTRRL---KKKKKRCLLTEETVTPKVLSSQ  216 (305)
Q Consensus       168 ~~~~~~~~-----------------l~~~~~~~L~~-~~----------~~C~~l---~~~ck~~V~~Y~~~Ii~~L~~~  216 (305)
                      +.+.....                 .+..+...|+. +.          ..|..+   ...|++||+.|+|.||.+|.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~C~~C~~~V~~~~~~l~d~~~~k~~~~~~~~~~ck~l~~~~~~Ck~fV~~y~p~~i~~l~~~  190 (218)
T KOG1340|consen  111 SASAGPVSEVFASQPAAGECELCRETVTEADTKLQDKPKTKGKIVSLLLKSCKSLPNYEQKCKQFVHEYGPQLITLLEEG  190 (218)
T ss_pred             CcccchhhhhhhhcccccccHHHHHHHHHHHHhcccchhHHHHHHHHHHhhccCCccchhHHHHHHHHhccHHHHHHHHh
Confidence            96332110                 01111112222 11          367666   4469999999999999999999


Q ss_pred             CChHHHhhhcCCCccc
Q psy4241         217 MNPDVVCSVAGLCNNA  232 (305)
Q Consensus       217 ~~P~~VC~~iglC~~~  232 (305)
                      ++|++||+.+|.|+.+
T Consensus       191 ~~p~~vC~~l~~C~~~  206 (218)
T KOG1340|consen  191 LDPHDVCTALGACPPA  206 (218)
T ss_pred             hCchhHHHHhhcCCcc
Confidence            9999999999999953

>smart00741 SapB Saposin (B) Domains

Probab=99.49  E-value=5.1e-14  Score=104.71  Aligned_cols=75  Identities=32%  Similarity=0.826  Sum_probs=72.7

Q ss_pred             cchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          92 VCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        92 ~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      .|.+|+.+|+.++.++.++.+++.|.++++++|+.+|. .+...|+.+|+.|+|.|++.|.++++|++||..+|+|
T Consensus         2 ~C~~C~~~v~~~~~~~~~~~~~~~i~~~~~~~C~~~~~-~~~~~C~~~v~~~~~~ii~~i~~~~~p~~iC~~l~~C   76 (76)
T smart00741        2 LCELCEDVVKQLENLLKDNKTEEEIKKALEKVCKKLPK-SLSDQCKEFVDQYGPEIIDLLEQGLDPKDVCQKLGLC   76 (76)
T ss_pred             cChHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence            69999999999999999999999999999999999995 6899999999999999999999999999999999998

Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.

>KOG1340|consensus

Probab=99.30  E-value=2.6e-12  Score=116.08  Aligned_cols=117  Identities=24%  Similarity=0.480  Sum_probs=95.7

Q ss_pred             ccchhh---hccCccccccCcCCCCcchhhhcccc--CCCCCCcchhhHHHHHHHHHHhcc-cchHHHHHHHHHhccCcC
Q psy4241          54 RGQSFW---CEDLASAASCGATGHCIQAVWSHMKV--KEDGDDVCKICKNMVGQARDQLQS-NETQQDLKAVFEGSCNLV  127 (305)
Q Consensus        54 ~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~~~--~~~~~~~C~~C~~vV~~v~~~L~~-n~te~~I~~~L~~~C~~l  127 (305)
                      |+|.+.   =+...|..+|..+++|+........+  ....+..|..|...|+++...|.+ +.++..+.....+.|..+
T Consensus        86 y~~~ii~~l~~~~~P~~vC~~l~lC~~~~~~~~~~~~~~~~~~~C~~C~~~V~~~~~~l~d~~~~k~~~~~~~~~~ck~l  165 (218)
T KOG1340|consen   86 YLDPIIKELESGTAPEDVCKKLNLCSASAGPVSEVFASQPAAGECELCRETVTEADTKLQDKPKTKGKIVSLLLKSCKSL  165 (218)
T ss_pred             hhhHHHHHHHhccCHHHHHHHhccCCcccchhhhhhhhcccccccHHHHHHHHHHHHhcccchhHHHHHHHHHHhhccCC
Confidence            667666   33467999999999999532111101  123378999999999999999999 778888888888999888


Q ss_pred             CCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccccCcch
Q psy4241         128 PVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAI  172 (305)
Q Consensus       128 P~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~~~~~  172 (305)
                      |  .++..|+.||++|+|.||..+.++++|++||+.+|.|+++..
T Consensus       166 ~--~~~~~Ck~fV~~y~p~~i~~l~~~~~p~~vC~~l~~C~~~~~  208 (218)
T KOG1340|consen  166 P--NYEQKCKQFVHEYGPQLITLLEEGLDPHDVCTALGACPPAAS  208 (218)
T ss_pred             c--cchhHHHHHHHHhccHHHHHHHHhhCchhHHHHhhcCCcccc
Confidence            7  488899999999999999999999999999999999996543

>smart00162 SAPA Saposin/surfactant protein-B A-type DOMAIN

Probab=99.18  E-value=2.8e-12  Score=82.45  Aligned_cols=34  Identities=44%  Similarity=1.116  Sum_probs=32.2

Q ss_pred             CcccccccchhhhccCccccccCcCCCCcchhhh
Q psy4241          48 SSPECARGQSFWCEDLASAASCGATGHCIQAVWS   81 (305)
Q Consensus        48 g~~~C~~gP~~wCq~l~pa~iC~~l~lC~~~~w~   81 (305)
                      |.++|++||+|||||++++..|++++||.+.+|+
T Consensus         1 G~~~CtwGPsyWC~~~~~A~~C~Av~hC~~~VW~   34 (34)
T smart00162        1 GPKRCTWGPSVWCQNLETASQCNAVKHCLQRVWS   34 (34)
T ss_pred             CcccccCCChhhcCCHHHHHHcCchhHHHhhccC
Confidence            6789999999999999999999999999999884

Present as four and three degenerate copies, respectively, in prosaposin and surfactant protein B. Single copies in acid sphingomyelinase, NK-lysin amoebapores and granulysin. Putative phospholipid membrane binding domains.

>PF02199 SapA: Saposin A-type domain; InterPro: IPR003119 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes []

Probab=99.02  E-value=2.1e-11  Score=78.98  Aligned_cols=34  Identities=44%  Similarity=1.146  Sum_probs=32.4

Q ss_pred             CcccccccchhhhccCccccccCcCCCCcchhhh
Q psy4241          48 SSPECARGQSFWCEDLASAASCGATGHCIQAVWS   81 (305)
Q Consensus        48 g~~~C~~gP~~wCq~l~pa~iC~~l~lC~~~~w~   81 (305)
                      |.+.|++||+|||+|+++|..|++++||.+.+|+
T Consensus         1 G~~~C~~GP~yWC~~~~~A~~CgA~~hC~~~vW~   34 (34)
T PF02199_consen    1 GPDQCTWGPSYWCQSLETAKECGAVKHCQQHVWN   34 (34)
T ss_pred             CCCccCCCCCccccCHHHHHHcCHHHHHHHhhcC
Confidence            6789999999999999999999999999999984

They probably act by isolating the lipid substrate from the membrane surroundings, thus making it more accessible to the soluble degradative enzymes. All mammalian saposins are synthesized as a single precursor molecule (prosaposin) which contains four Saposin-B domains, yielding the active saposins after proteolytic cleavage, and two Saposin-A domains that are removed in the activation reaction. The Saposin-B domains also occur in other proteins, many of them active in the lysis of membranes [, ]. The saposin A-type domain may play a role in targeting, as propeptides containing the saposin A-type domain of the C terminus of prosaposin and of the N-terminal part of pulmonary surfactant-associated protein B are involved in the transport to the lysosome and to secretory granules (lamellar bodies, which are lysosomal-like organelles), respectively [].

>PF03489 SapB_2: Saposin-like type B, region 2; InterPro: IPR008138 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes []

Probab=98.85  E-value=2.6e-09  Score=69.48  Aligned_cols=35  Identities=34%  Similarity=0.974  Sum_probs=33.7

Q ss_pred             hhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241         133 REGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus       133 ~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      +++|+.+|++|+|.||++|.++++|+.||+.+|+|
T Consensus         1 ~~~C~~~V~~y~~~ii~~l~~~~~p~~iC~~i~~C   35 (35)
T PF03489_consen    1 SDECKNFVDQYGPQIIQLLEKQLDPQQICTKIGLC   35 (35)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSTHHHHHHHTTSS
T ss_pred             CcHHHHHHHHHHHHHHHHHHhcCChHHHHHHcCCC
Confidence            46899999999999999999999999999999999

They probably act by isolating the lipid substrate from the membrane surroundings, thus making it more accessible to the soluble degradative enzymes. All mammalian saposins are synthesized as a single precursor molecule (prosaposin) which contains four Saposin-B domains, yielding the active saposins after proteolytic cleavage, and two Saposin-A domains that are removed in the activation reaction. The Saposin-B domains also occur in other proteins, many of them active in the lysis of membranes [, ].; PDB: 3BQQ_A 2RB3_B 2R0R_A 3BQP_A 2R1Q_A 1NKL_A 1L9L_A 1QDM_C 3RFI_A 4DDJ_A ....

>PF03489 SapB_2: Saposin-like type B, region 2; InterPro: IPR008138 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes []

Probab=98.63  E-value=4.1e-08  Score=63.76  Aligned_cols=34  Identities=24%  Similarity=0.484  Sum_probs=32.4

Q ss_pred             HHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241         196 KKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC  229 (305)
Q Consensus       196 ~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC  229 (305)
                      ..|+.||++|+|.|+++|.++++|+.||+.+|+|
T Consensus         2 ~~C~~~V~~y~~~ii~~l~~~~~p~~iC~~i~~C   35 (35)
T PF03489_consen    2 DECKNFVDQYGPQIIQLLEKQLDPQQICTKIGLC   35 (35)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTHHHHHHHTTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCChHHHHHHcCCC
Confidence            3589999999999999999999999999999999

They probably act by isolating the lipid substrate from the membrane surroundings, thus making it more accessible to the soluble degradative enzymes. All mammalian saposins are synthesized as a single precursor molecule (prosaposin) which contains four Saposin-B domains, yielding the active saposins after proteolytic cleavage, and two Saposin-A domains that are removed in the activation reaction. The Saposin-B domains also occur in other proteins, many of them active in the lysis of membranes [, ].; PDB: 3BQQ_A 2RB3_B 2R0R_A 3BQP_A 2R1Q_A 1NKL_A 1L9L_A 1QDM_C 3RFI_A 4DDJ_A ....

>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes

Probab=98.62  E-value=2.1e-08  Score=66.42  Aligned_cols=38  Identities=37%  Similarity=0.775  Sum_probs=36.7

Q ss_pred             CcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCC
Q psy4241          91 DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP  128 (305)
Q Consensus        91 ~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP  128 (305)
                      ..|++|+++|++++++|++|.|+++|+++|+++|+.+|
T Consensus         2 ~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lP   39 (39)
T PF05184_consen    2 DECDICKFVVKEIEKLLKNNKTEEEIKKALEKACNKLP   39 (39)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHTTSC
T ss_pred             CcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHhhCc
Confidence            46999999999999999999999999999999999998

Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....

>smart00741 SapB Saposin (B) Domains

Probab=97.49  E-value=0.00011  Score=54.01  Aligned_cols=40  Identities=23%  Similarity=0.407  Sum_probs=35.6

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC  229 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC  229 (305)
                      .|..+    ...|+.+++.|+|.|++.+.+.++|+.||+.+|+|
T Consensus        33 ~C~~~~~~~~~~C~~~v~~~~~~ii~~i~~~~~p~~iC~~l~~C   76 (76)
T smart00741       33 VCKKLPKSLSDQCKEFVDQYGPEIIDLLEQGLDPKDVCQKLGLC   76 (76)
T ss_pred             HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence            46555    34689999999999999999999999999999998

Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.

>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes

Probab=96.84  E-value=0.00015  Score=47.76  Aligned_cols=32  Identities=9%  Similarity=0.313  Sum_probs=29.7

Q ss_pred             CCCcchHHHHHHHHHHHhhhchhhhhcCCCCc
Q psy4241         256 SDCKNCASFADLVTKKFNAASKQDVTNDPFGS  287 (305)
Q Consensus       256 ~~C~~Ce~vV~~v~~~L~~n~ted~~~~~~~~  287 (305)
                      ..|.+|+++|+++++.|.+|.|++.|.++|++
T Consensus         2 ~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~   33 (39)
T PF05184_consen    2 DECDICKFVVKEIEKLLKNNKTEEEIKKALEK   33 (39)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTCHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence            47999999999999999999999999998875

Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....

>KOG3770|consensus

Probab=85.72  E-value=1.1  Score=46.38  Aligned_cols=81  Identities=19%  Similarity=0.402  Sum_probs=70.4

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCC-Chhhhcccc-c-c
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQM-NPDVVCSVA-G-L  166 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~-~P~~IC~~l-g-l  166 (305)
                      ...|..|+..++.++..++...+...|...+-.+|+.+.. .-...|+.+++.|...++..+.... +|.+||..+ + -
T Consensus        23 ~~~c~~c~~~~~~~~~~~~~~~~~~~v~v~~~~~c~~~~~-~~~~vc~~~~~~f~~~f~~v~~r~~~~~~~icg~~l~~~  101 (577)
T KOG3770|consen   23 KAQCTFCEKELSNAQKFPARISTNCTVIVFAVAVCELFVI-EPTPVCTWIIDEFNDEFFDVFVRSANSPEEICGHFLPDT  101 (577)
T ss_pred             cchhhhhhhhhhhHHhhhhcccccchhhhhHHHHhccccc-cCcchhhHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCc
Confidence            3489999999999999999999999999999999998775 4578999999999999999887755 899999764 4 6


Q ss_pred             ccCcc
Q psy4241         167 CNNAA  171 (305)
Q Consensus       167 C~~~~  171 (305)
                      |....
T Consensus       102 c~~~~  106 (577)
T KOG3770|consen  102 CGDIV  106 (577)
T ss_pred             ccccc
Confidence            87654

>PF11938 DUF3456: TLR4 regulator and MIR-interacting MSAP; InterPro: IPR021852 This family of proteins are functionally uncharacterised

Probab=81.02  E-value=6.1  Score=33.76  Aligned_cols=73  Identities=22%  Similarity=0.471  Sum_probs=53.5

Q ss_pred             CcchhhHHHHHHHHHHhcc---------------------------cchHHHHHHHHHhccCcCCC--------------
Q psy4241          91 DVCKICKNMVGQARDQLQS---------------------------NETQQDLKAVFEGSCNLVPV--------------  129 (305)
Q Consensus        91 ~~C~~C~~vV~~v~~~L~~---------------------------n~te~~I~~~L~~~C~~lP~--------------  129 (305)
                      ..|..|+.+|..++..|..                           ..++..+.++|+++|+.+..              
T Consensus         2 ~~C~~C~~l~~el~~~l~~~~~~~~v~~~~~r~d~~g~~~~~~~~y~~SE~~l~EvlE~vC~~~~~Y~~~~~~~~~~~~~   81 (151)
T PF11938_consen    2 LKCSACRALVEELEHRLAKTDPKKFVDVGGFRLDPDGERKKKKIPYARSELRLVEVLENVCEKMKDYVLHKDKSTGKRVY   81 (151)
T ss_pred             CcchHHHHHHHHHHHHHHHhCCcCceeccccccccccccccccCccccchhHHHHHHHHHccCcccceeeecCCCCceEE
Confidence            4699999999988876643                           13556778999999986430              


Q ss_pred             --------------------------cchhhhhHHHHHhhHHHHHHHHHcCCC----hhhhccc
Q psy4241         130 --------------------------KVIREGCDKLVDEFVPELIEVLSSQMN----PDVVCSV  163 (305)
Q Consensus       130 --------------------------~~~~~~C~~lV~~Y~p~II~~L~~~~~----P~~IC~~  163 (305)
                                                +.+...|..+|+.|...|++++.+...    -+.+|..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~C~~ilEe~Ed~i~~~~~~~~~~~~l~~~LC~~  145 (151)
T PF11938_consen   82 KRMSTTGGTNPELSEKDVKVDPSDENKRLKFYCERILEEYEDEIEEWFFSEQDEDDLEEWLCSE  145 (151)
T ss_pred             EecCCCcCcccccccccceeecHHHHhHHHHHHHHHHHHhHHHHHHHHHhcCCccCHHHHhhhc
Confidence                                      013568999999999999999998653    1345653

This protein is found in eukaryotes. Proteins in this family are typically between 182 to 356 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	305
3bqp_A	80	Crystal Structure Of Human Saposin D (Orthorhombic)		5e-09
2rb3_A	85	Crystal Structure Of Human Saposin D Length = 85		5e-09
2r0r_A	85	Crystal Structure Of Human Saposin D Variant Sapd K		1e-08
2r1q_A	85	Crystal Structure Of Iodinated Human Saposin D In S		4e-08
4ddj_A	83	Crystal Structure Of Saposin A In Complex With Laur		9e-08
2dob_A	83	Crystal Structure Of Human Saposin A Length = 83		1e-06
2gtg_A	83	Crystal Structure Of Human Saposin C Length = 83		2e-06
2qyp_A	91	Orthorhombic Crystal Structure Of Human Saposin C D		6e-06
2z9a_A	88	Crystal Structure Of Human Saposin C Dimer In Open		6e-06
1m12_A	84	Nmr Solution Structure Of Human Saposin C Length =		7e-06

>pdb|3BQP|A Chain A, Crystal Structure Of Human Saposin D (Orthorhombic) Length = 80

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C++CK +VG     L+ N T+Q++ A  E  C+ +P    ++ CD+ V E+ P LIE+L 
Sbjct: 5   CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ-CDQFVAEYEPVLIEILV 63
Query: 153 SQMNPDVVCSVAGLC 167
             M+P  VC   G C
Sbjct: 64  EVMDPSFVCLKIGAC 78

>pdb|2RB3|A Chain A, Crystal Structure Of Human Saposin D Length = 85

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C++CK +VG     L+ N T+Q++ A  E  C+ +P    ++ CD+ V E+ P LIE+L 
Sbjct: 4   CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ-CDQFVAEYEPVLIEILV 62
Query: 153 SQMNPDVVCSVAGLC 167
             M+P  VC   G C
Sbjct: 63  EVMDPSFVCLKIGAC 77

>pdb|2R0R|A Chain A, Crystal Structure Of Human Saposin D Variant Sapd K9e Length = 85

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C++C+ +VG     L+ N T+Q++ A  E  C+ +P    ++ CD+ V E+ P LIE+L 
Sbjct: 4   CEVCEKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ-CDQFVAEYEPVLIEILV 62
Query: 153 SQMNPDVVCSVAGLC 167
             M+P  VC   G C
Sbjct: 63  EVMDPSFVCLKIGAC 77

>pdb|2R1Q|A Chain A, Crystal Structure Of Iodinated Human Saposin D In Space Group C2221 Length = 85

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C++CK +VG     L+ N T+Q++ A  E  C+ +P    ++ CD+ V E  P LIE+L 
Sbjct: 4   CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP-DPYQKQCDQFVAEXEPVLIEILV 62
Query: 153 SQMNPDVVCSVAGLC 167
             M+P  VC   G C
Sbjct: 63  EVMDPSFVCLKIGAC 77

>pdb|4DDJ|A Chain A, Crystal Structure Of Saposin A In Complex With Lauryldimethylamine-N- Oxide (Ldao) Length = 83

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C ICK++V  A D L+ N T++++    E +C+ +P   +   C ++VD ++P +++++ 
Sbjct: 6   CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 65
Query: 153 SQMN-PDVVCSVAGLCNN 169
            +M+ P  VCS   LC +
Sbjct: 66  GEMSRPGEVCSALNLCES 83

>pdb|2DOB|A Chain A, Crystal Structure Of Human Saposin A Length = 83

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C ICK++V  A D L+ N T++++    E +C+ +P       C ++VD ++P +++++ 
Sbjct: 6   CDICKDVVTAAGDXLKDNATEEEILVYLEKTCDWLPKPNXSASCKEIVDSYLPVILDIIK 65
Query: 153 SQMN-PDVVCSVAGLCNN 169
            + + P  VCS   LC +
Sbjct: 66  GEXSRPGEVCSALNLCES 83

>pdb|2GTG|A Chain A, Crystal Structure Of Human Saposin C Length = 83

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 88  DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPEL 147
           D D  C++C+ +V +    + +N+T++++   F+  C+ +P K + E C ++VD +   +
Sbjct: 2   DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSI 60
Query: 148 IEVLSSQMNPDVVCSVAGLCNNA 170
           + +L  +++P++VCS+  LC+  
Sbjct: 61  LSILLEEVSPELVCSMLHLCSGT 83

>pdb|2QYP|A Chain A, Orthorhombic Crystal Structure Of Human Saposin C Dimer In Open Conformation Length = 91

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
            D  C++C+ +V +    + +N+T++++   F+  C+ +P K + E C ++VD +   ++
Sbjct: 4   SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSIL 62
Query: 149 EVLSSQMNPDVVCSVAGLCNNA 170
            +L  +++P++VCS+  LC+  
Sbjct: 63  SILLEEVSPELVCSMLHLCSGT 84

>pdb|2Z9A|A Chain A, Crystal Structure Of Human Saposin C Dimer In Open Conformation Length = 88

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
            D  C++C+ +V +    + +N+T++++   F+  C+ +P K + E C ++VD +   ++
Sbjct: 3   SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSIL 61
Query: 149 EVLSSQMNPDVVCSVAGLCNN 169
            +L  +++P++VCS+  LC+ 
Sbjct: 62  SILLEEVSPELVCSMLHLCSR 82

>pdb|1M12|A Chain A, Nmr Solution Structure Of Human Saposin C Length = 84

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
            D  C++C+ +V +    + +N+T++++   F+  C+ +P K + E C ++VD +   ++
Sbjct: 1   SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSIL 59
Query: 149 EVLSSQMNPDVVCSVAGLCNNAA 171
            +L  +++P++VCS+  LC+   
Sbjct: 60  SILLEEVSPELVCSMLHLCSGLV 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	305
4ddj_A	83	Saposin-A, protein A; saposin fold, sphingolipid a	1e-22
3bqp_A	80	Proactivator polypeptide; saposin, sphingolipid ac	2e-17
2qyp_A	91	Proactivator polypeptide; saposin, activator prote	3e-17
2gtg_A	83	Proactivator polypeptide; saposin, sphingolipid ac	5e-17
1nkl_A	78	NK-lysin; saposin fold, antibacterial peptide, tum	5e-15
1n69_A	81	Saposin B; lipid binding protein, glycosphingolipi	3e-09
2js9_A	99	Saposin-like protein family protein 5; caenopore-5	9e-07
3rfi_A	108	Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber	2e-05
3rfi_A	108	Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A* Length = 83

 Score = 88.9 bits (220), Expect = 1e-22
 Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
           G   C ICK++V  A D L+ N T++++    E +C+ +P   +   C ++VD ++P ++
Sbjct: 2   GSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVIL 61

Query: 149 EVLSSQMN-PDVVCSVAGLCNN 169
           +++  +M+ P  VCS   LC +
Sbjct: 62  DIIKGEMSRPGEVCSALNLCES 83

>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Length = 80

 Score = 74.6 bits (183), Expect = 2e-17
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 90  DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIE 149
              C++CK +VG     L+ N T+Q++ A  E  C+ +P    ++ CD+ V E+ P LIE
Sbjct: 2   GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ-CDQFVAEYEPVLIE 60

Query: 150 VLSSQMNPDVVCSVAGLCN 168
           +L   M+P  VC   G C 
Sbjct: 61  ILVEVMDPSFVCLKIGACP 79

>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Length = 91

 Score = 74.7 bits (183), Expect = 3e-17
 Identities = 20/86 (23%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
            D  C++C+ +V +    + +N+T++++   F+  C+ +P  +  E C ++VD +   ++
Sbjct: 4   SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEE-CQEVVDTYGSSIL 62

Query: 149 EVLSSQMNPDVVCSVAGLCNNAAIDR 174
            +L  +++P++VCS+  LC+      
Sbjct: 63  SILLEEVSPELVCSMLHLCSGTRHHH 88

>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A Length = 83

 Score = 73.5 bits (180), Expect = 5e-17
 Identities = 22/82 (26%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 88  DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPEL 147
           D D  C++C+ +V +    + +N+T++++   F+  C+ +P K + E C ++VD +   +
Sbjct: 2   DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSI 60

Query: 148 IEVLSSQMNPDVVCSVAGLCNN 169
           + +L  +++P++VCS+  LC+ 
Sbjct: 61  LSILLEEVSPELVCSMLHLCSG 82

>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1 Length = 78

 Score = 68.0 bits (166), Expect = 5e-15
 Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
           C+ C+ ++ +  D +     +  +       C+ + +  +R  C K++  F+  +   + 
Sbjct: 4   CESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI--LRGLCKKIMRSFLRRISWDIL 61

Query: 153 SQMNPDVVCSVAGLC 167
           +   P  +C    +C
Sbjct: 62  TGKKPQAICVDIKIC 76

>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3 Length = 81

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 89  GDDVCKICKNMVGQARDQLQSNET-QQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPEL 147
             DVC+ C  MV   +  +++N T  Q L    +  C+ +   +    C   + ++    
Sbjct: 2   DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI-CKNYISQYSEIA 60

Query: 148 IEVLSSQMNPDVVCSVAGLC 167
           I+++   M P  +C++ G C
Sbjct: 61  IQMM-MHMQPKEICALVGFC 79

>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A Length = 99

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)

Query: 81  SHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCN--LVPVKVIREGCDK 138
           S ++ +      C++C+ +V +       +     +K  F+  C      +      CD 
Sbjct: 12  SGIEGRGRSALSCQMCELVVKKYEGSADKDAN--VIKKDFDAECKKLFHTIPFGTRECDH 69

Query: 139 LVDEFVPELIEVLSSQMNPDVVCSVAGLC 167
            V+  V  +I  L     P  VC+    C
Sbjct: 70  YVNSKVDPIIHELEGGTAPKDVCTKLNEC 98

>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum} Length = 108

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 131 VIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167
           ++   C  +V ++   + ++L S + PD VCS AGLC
Sbjct: 6   IVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLC 42

>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum} Length = 108

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 8/48 (16%), Positives = 17/48 (35%)

Query: 81  SHMKVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP 128
                      +C  C+  V   ++QL+   T++ +       C  +P
Sbjct: 61  ETEGSSVGEAPLCTACEMAVVWMQNQLKQEGTKEKVLEYVNQLCEKIP 108

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 78/234 (33%)

Query: 99  MVGQ-----ARDQLQSNETQQDLK-AVF---EGSCNLVPVKVIREGCDKLVDEFVPELIE 149
           ++G      A D   S + Q  +   +F     +CN                E V E+++
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN--------------SPETVLEMLQ 203

Query: 150 VLSSQMNPDVVCSVAGLCN-----NAAIDRLLLTAAGDHRDLHSFPTRRL--KKKKKRCL 202
            L  Q++P+         N     ++    L                RRL   K  + CL
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL----------------RRLLKSKPYENCL 247

Query: 203 LTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLT--------AAPAPKTSTPTKDD 254
           L        VL +  N     +    C      ++LLT           A  T+  + D 
Sbjct: 248 L--------VLLNVQNAKAWNAFNLSC------KILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 255 NSDC----KNCASFADLVTKKFNAASKQDVTNDPFG----SEVLSQAP--WSGW 298
           +S      +  +     +  +     ++ +T +P      +E +      W  W
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	305
1nkl_A	78	NK-lysin; saposin fold, antibacterial peptide, tum	99.8
1of9_A	77	Pore-forming peptide ameobapore A; toxin, saplip,	99.8
3bqp_A	80	Proactivator polypeptide; saposin, sphingolipid ac	99.78
2gtg_A	83	Proactivator polypeptide; saposin, sphingolipid ac	99.78
2qyp_A	91	Proactivator polypeptide; saposin, activator prote	99.78
4ddj_A	83	Saposin-A, protein A; saposin fold, sphingolipid a	99.76
1l9l_A	74	Granulysin; saposin fold, membrane-lytic, antimicr	99.76
1n69_A	81	Saposin B; lipid binding protein, glycosphingolipi	99.75
2js9_A	99	Saposin-like protein family protein 5; caenopore-5	99.74
3rfi_A	108	Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber	99.63
3s64_A	87	AC-SLP-1, saposin-like protein 1; lipid-binding, l	99.36
3rfi_A	108	Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber	99.19
1qdm_A	478	Prophytepsin; aspartic proteinases, saposin-like d	98.95
3bqp_A	80	Proactivator polypeptide; saposin, sphingolipid ac	98.44
2qyp_A	91	Proactivator polypeptide; saposin, activator prote	98.4
1nkl_A	78	NK-lysin; saposin fold, antibacterial peptide, tum	98.36
2gtg_A	83	Proactivator polypeptide; saposin, sphingolipid ac	98.3
1of9_A	77	Pore-forming peptide ameobapore A; toxin, saplip,	98.28
1n69_A	81	Saposin B; lipid binding protein, glycosphingolipi	98.17
4ddj_A	83	Saposin-A, protein A; saposin fold, sphingolipid a	98.05
2js9_A	99	Saposin-like protein family protein 5; caenopore-5	98.03
1l9l_A	74	Granulysin; saposin fold, membrane-lytic, antimicr	97.94
1qdm_A	478	Prophytepsin; aspartic proteinases, saposin-like d	97.85
3s64_A	87	AC-SLP-1, saposin-like protein 1; lipid-binding, l	97.35
3s63_A	117	Na-SLP-1, saposin-like protein; lipid-binding, lip	96.7
2w50_A	102	ArMet-like protein 1; MANF, CDNF, saposin, secrete	84.69

>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1

Probab=99.80  E-value=3.5e-20  Score=140.97  Aligned_cols=78  Identities=14%  Similarity=0.464  Sum_probs=74.9

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccccC
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNN  169 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~~  169 (305)
                      +..|.+|+++|+++++++.+|.|+++|+++|+++|+.+|.  ++.+|+.||++|+|.||++|.++++|++||+.+|+|++
T Consensus         1 g~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~--~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~~   78 (78)
T 1nkl_A            1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI--LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE   78 (78)
T ss_dssp             CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS--THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSCC
T ss_pred             CCcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch--hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCCc
Confidence            3579999999999999999999999999999999999995  99999999999999999999999999999999999975

>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4

Probab=99.80  E-value=4.2e-20  Score=140.28  Aligned_cols=76  Identities=18%  Similarity=0.507  Sum_probs=73.8

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      +..|.+|+++|+++++++.+| |+++|+++|+++|+.+|+ .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus         2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC   77 (77)
T 1of9_A            2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASG-FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC   77 (77)
T ss_dssp             CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSS-TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred             CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence            568999999999999999999 999999999999999997 7999999999999999999999999999999999999

>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A

Probab=99.78  E-value=2.4e-19  Score=135.63  Aligned_cols=79  Identities=35%  Similarity=0.770  Sum_probs=76.1

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccccC
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNN  169 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~~  169 (305)
                      +..|.+|+++|+.++++|++|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|+.||+.+|+|++
T Consensus         2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~~   80 (80)
T 3bqp_A            2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS   80 (80)
T ss_dssp             CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCG-GGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSCC
T ss_pred             cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCCc
Confidence            5689999999999999999999999999999999999997 689999999999999999999999999999999999974

>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A

Probab=99.78  E-value=1.9e-19  Score=137.73  Aligned_cols=81  Identities=26%  Similarity=0.703  Sum_probs=75.9

Q ss_pred             CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      .++..|.+|+++|+.++++|.+|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus         2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC   80 (83)
T 2gtg_A            2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLC   80 (83)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSC
T ss_pred             CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC-cchhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCC
Confidence            356789999999999999999999999999999999999996 6999999999999999999999999999999999999


Q ss_pred             cC
Q psy4241         168 NN  169 (305)
Q Consensus       168 ~~  169 (305)
                      ++
T Consensus        81 ~~   82 (83)
T 2gtg_A           81 SG   82 (83)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A

Probab=99.78  E-value=1.5e-19  Score=140.90  Aligned_cols=83  Identities=24%  Similarity=0.656  Sum_probs=75.5

Q ss_pred             CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      .++..|.+|+++|++++++|++|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus         3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC   81 (91)
T 2qyp_A            3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLC   81 (91)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCS-STTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC
T ss_pred             CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCC-CcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence            356789999999999999999999999999999999999997 5899999999999999999999999999999999999


Q ss_pred             cCcc
Q psy4241         168 NNAA  171 (305)
Q Consensus       168 ~~~~  171 (305)
                      ++++
T Consensus        82 ~~~~   85 (91)
T 2qyp_A           82 SGTR   85 (91)
T ss_dssp             ----
T ss_pred             CCcc
Confidence            9865

>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*

Probab=99.76  E-value=4.9e-19  Score=135.57  Aligned_cols=80  Identities=29%  Similarity=0.720  Sum_probs=74.8

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcC-CChhhhcccccccc
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQ-MNPDVVCSVAGLCN  168 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~-~~P~~IC~~lglC~  168 (305)
                      +..|.+|+++|+.+++++++|.|+++|+++|+++|+.+|.+.++.+|+.+|++|+|.||++|.++ .+|+.||+.+|+|+
T Consensus         3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~~~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~   82 (83)
T 4ddj_A            3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE   82 (83)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred             CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence            46799999999999999999999999999999999999983369999999999999999999998 59999999999997


Q ss_pred             C
Q psy4241         169 N  169 (305)
Q Consensus       169 ~  169 (305)
                      +
T Consensus        83 s   83 (83)
T 4ddj_A           83 S   83 (83)
T ss_dssp             -
T ss_pred             c
Confidence            5

>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1

Probab=99.76  E-value=7.5e-19  Score=132.55  Aligned_cols=73  Identities=14%  Similarity=0.292  Sum_probs=70.0

Q ss_pred             CcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccc
Q psy4241          91 DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAG  165 (305)
Q Consensus        91 ~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lg  165 (305)
                      ..|.+|+++|++++++| +|.|+++|+++|+++|+.+|. .+++.|+.||++|+|.||++|.++.+|++||..++
T Consensus         2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~-~~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik   74 (74)
T 1l9l_A            2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS-RWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR   74 (74)
T ss_dssp             HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred             CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence            46999999999999999 999999999999999999996 69999999999999999999999999999999875

>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3

Probab=99.75  E-value=9.1e-19  Score=133.89  Aligned_cols=79  Identities=23%  Similarity=0.566  Sum_probs=73.4

Q ss_pred             CCCcchhhHHHHHHHHHHhcccchH-HHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          89 GDDVCKICKNMVGQARDQLQSNETQ-QDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        89 ~~~~C~~C~~vV~~v~~~L~~n~te-~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      ++..|.+|+++|+.+++++.+|.|+ ++|+++|+++|+.+|. .++.+|+.+|++|+|.|+++|. +++|++||+.+|+|
T Consensus         2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC   79 (81)
T 1n69_A            2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP-GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFC   79 (81)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT-THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSC
T ss_pred             CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCC
Confidence            3568999999999999999999999 9999999999999997 6999999999999999999887 69999999999999


Q ss_pred             cC
Q psy4241         168 NN  169 (305)
Q Consensus       168 ~~  169 (305)
                      ++
T Consensus        80 ~s   81 (81)
T 1n69_A           80 DE   81 (81)
T ss_dssp             C-
T ss_pred             CC
Confidence            74

>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A

Probab=99.74  E-value=5.8e-19  Score=140.27  Aligned_cols=79  Identities=20%  Similarity=0.396  Sum_probs=74.5

Q ss_pred             CCCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcc---hhhhhHHHHHhhHHHHHHHHHcCCChhhhccc
Q psy4241          87 EDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKV---IREGCDKLVDEFVPELIEVLSSQMNPDVVCSV  163 (305)
Q Consensus        87 ~~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~---~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~  163 (305)
                      ..++..|.+|+++|++++++|  |.|+++|+++|+++|+.||. .   ++.+|+.+|++|+|.||++|.++++|++||+.
T Consensus        18 ~~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~-~ipf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~   94 (99)
T 2js9_A           18 GRSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFH-TIPFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTK   94 (99)
T ss_dssp             -CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGG-GSTTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHH
T ss_pred             CCCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCC-cchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhh
Confidence            467889999999999999999  78999999999999999996 6   89999999999999999999999999999999


Q ss_pred             ccccc
Q psy4241         164 AGLCN  168 (305)
Q Consensus       164 lglC~  168 (305)
                      ||+|+
T Consensus        95 L~lC~   99 (99)
T 2js9_A           95 LNECP   99 (99)
T ss_dssp             TTCCC
T ss_pred             cCCCC
Confidence            99995

>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}

Probab=99.63  E-value=4.8e-17  Score=131.04  Aligned_cols=92  Identities=15%  Similarity=0.228  Sum_probs=67.5

Q ss_pred             hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchhhhhhhcCCCCCCCCCCC---CCCCCCcchHHHHHHHHHH
Q psy4241         195 KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTSTPTK---DDNSDCKNCASFADLVTKK  271 (305)
Q Consensus       195 ~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~Ce~vV~~v~~~  271 (305)
                      ...|+.+|++|||.|+++|.++++|+.||+.+|+|++.....+ .+.+..+..+....   .++..|.+|+++|.|++++
T Consensus         8 ~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~-~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~~ie~~   86 (108)
T 3rfi_A            8 SMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHV-SSNIKTVVERETEGSSVGEAPLCTACEMAVVWMQNQ   86 (108)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccc-ccccccccccccccccCCCCCcChhHHHHHHHHHHH
Confidence            4469999999999999999999999999999999998664322 11222222211111   3688999999999999999


Q ss_pred             HhhhchhhhhcCCCCc
Q psy4241         272 FNAASKQDVTNDPFGS  287 (305)
Q Consensus       272 L~~n~ted~~~~~~~~  287 (305)
                      |++|+||+.|.++|++
T Consensus        87 L~~N~Te~eI~~~l~k  102 (108)
T 3rfi_A           87 LKQEGTKEKVLEYVNQ  102 (108)
T ss_dssp             HTSHHHHHHHHHHHHH
T ss_pred             HhcCchHHHHHHHHHH
Confidence            9999999999999886

>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}

Probab=99.36  E-value=1.7e-13  Score=105.85  Aligned_cols=78  Identities=19%  Similarity=0.367  Sum_probs=70.0

Q ss_pred             CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCC--CcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccc
Q psy4241          88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP--VKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAG  165 (305)
Q Consensus        88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP--~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lg  165 (305)
                      .+...|.+|+++|+.++.++.+  +..+|++++++.|+.++  .++...+|+.+|++|++.||+.|+++.+|+.||+.|+
T Consensus         8 ~~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~   85 (87)
T 3s64_A            8 SNVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLH   85 (87)
T ss_dssp             CCTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhc
Confidence            4568899999999999999876  44479999999999883  2456899999999999999999999999999999999


Q ss_pred             cc
Q psy4241         166 LC  167 (305)
Q Consensus       166 lC  167 (305)
                      +|
T Consensus        86 ~C   87 (87)
T 3s64_A           86 AC   87 (87)
T ss_dssp             CC
T ss_pred             cC
Confidence            98

>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}

Probab=99.19  E-value=3.3e-12  Score=102.63  Aligned_cols=80  Identities=23%  Similarity=0.505  Sum_probs=64.4

Q ss_pred             ccccc-----ccchhh---hccCccccccCcCCCCcchhhhccc------c----CC---CCCCcchhhHHHHHHHHHHh
Q psy4241          49 SPECA-----RGQSFW---CEDLASAASCGATGHCIQAVWSHMK------V----KE---DGDDVCKICKNMVGQARDQL  107 (305)
Q Consensus        49 ~~~C~-----~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~~------~----~~---~~~~~C~~C~~vV~~v~~~L  107 (305)
                      +.+|.     |||.+|   -+.+.|..+|+.+|+|.........      +    +.   .++..|.+|+++|.+++.+|
T Consensus         8 ~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~~ie~~L   87 (108)
T 3rfi_A            8 SMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVVWMQNQL   87 (108)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccCCCCCcChhHHHHHHHHHHHH
Confidence            57786     999999   5778999999999999986431100      1    11   26788999999999999999


Q ss_pred             cccchHHHHHHHHHhccCcCC
Q psy4241         108 QSNETQQDLKAVFEGSCNLVP  128 (305)
Q Consensus       108 ~~n~te~~I~~~L~~~C~~lP  128 (305)
                      ++|.|+++|+++|+++|++||
T Consensus        88 ~~N~Te~eI~~~l~k~C~~LP  108 (108)
T 3rfi_A           88 KQEGTKEKVLEYVNQLCEKIP  108 (108)
T ss_dssp             TSHHHHHHHHHHHHHHHTTCC
T ss_pred             hcCchHHHHHHHHHHHHhhCc
Confidence            999999999999999999998

>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2

Probab=98.95  E-value=1.8e-10  Score=114.07  Aligned_cols=90  Identities=14%  Similarity=0.223  Sum_probs=62.7

Q ss_pred             HHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchhhhhhhcCCCCCCCC----CCCCCCCCCcchHHHHHHHHHHH
Q psy4241         197 KKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTST----PTKDDNSDCKNCASFADLVTKKF  272 (305)
Q Consensus       197 ~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~~~~~~~~~~~~~~~----~~~~~~~~C~~Ce~vV~~v~~~L  272 (305)
                      .|+.+|++|++.|+++|.+++.|..||+.+|+|......+.. ..+..+.+++    ....++..|.+|||+|.|++++|
T Consensus       288 ~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l  366 (478)
T 1qdm_A          288 ECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVS-AGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQL  366 (478)
T ss_dssp             HHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccc-ccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence            378899999999999999999999999999999987654331 2222222211    12345678999999999999999


Q ss_pred             hhhchhhhhcCCCCc
Q psy4241         273 NAASKQDVTNDPFGS  287 (305)
Q Consensus       273 ~~n~ted~~~~~~~~  287 (305)
                      ++|+|++.|..++++
T Consensus       367 ~~n~t~~~I~~~~~~  381 (478)
T 1qdm_A          367 AQNKTQDLILDYVNQ  381 (478)
T ss_dssp             HTTCCHHHHHHHHHH
T ss_pred             hccccHHHHHHHHHH
Confidence            999999999887765

>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A

Probab=98.44  E-value=1.4e-07  Score=70.54  Aligned_cols=42  Identities=26%  Similarity=0.414  Sum_probs=37.6

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN  231 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~  231 (305)
                      .|+.+    ...|+.+|++|+|.|+++|.++++|+.||+.+|+|++
T Consensus        35 ~C~~lp~~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~~   80 (80)
T 3bqp_A           35 GCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS   80 (80)
T ss_dssp             HGGGSCGGGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSCC
T ss_pred             HHHhCCCccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCCc
Confidence            57666    3469999999999999999999999999999999974

>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A

Probab=98.40  E-value=1.2e-07  Score=73.25  Aligned_cols=46  Identities=20%  Similarity=0.380  Sum_probs=35.6

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchh
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAID  235 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~  235 (305)
                      .|+.+    ...|+.||++|+|.|+++|.++++|+.||+.+|+|++.++.
T Consensus        38 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~~~   87 (91)
T 2qyp_A           38 MCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRHH   87 (91)
T ss_dssp             HHHTSCSSTTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC------
T ss_pred             HHHHCCCCcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcccc
Confidence            45555    24699999999999999999999999999999999997654

>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1

Probab=98.36  E-value=2.5e-07  Score=69.64  Aligned_cols=42  Identities=12%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             ccccc---hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241         190 PTRRL---KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN  231 (305)
Q Consensus       190 ~C~~l---~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~  231 (305)
                      .|+.+   ...|+.||++|+|.|+++|.++.+|+.||+.+|+|++
T Consensus        34 ~C~~lp~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~~   78 (78)
T 1nkl_A           34 VCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE   78 (78)
T ss_dssp             HHHHSCSTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSCC
T ss_pred             HHhhCchhHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCCc
Confidence            46655   3569999999999999999999999999999999974

>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A

Probab=98.30  E-value=4.8e-07  Score=68.39  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=37.0

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN  231 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~  231 (305)
                      .|+.+    ...|+.+|++|+|.|+++|.++++|+.||+.+|+|++
T Consensus        37 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~   82 (83)
T 2gtg_A           37 MCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG   82 (83)
T ss_dssp             HTTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred             HHHHCCCcchhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence            56666    3468999999999999999999999999999999985

>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4

Probab=98.28  E-value=4.7e-07  Score=68.03  Aligned_cols=40  Identities=8%  Similarity=0.186  Sum_probs=36.1

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC  229 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC  229 (305)
                      .|+.+    ...|+.||++|+|.|+++|.++++|+.||+.+|+|
T Consensus        34 ~C~~lp~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC   77 (77)
T 1of9_A           34 LCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC   77 (77)
T ss_dssp             HHTTCSSTTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred             HHHcCChHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence            46655    35699999999999999999999999999999999

>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3

Probab=98.17  E-value=1.3e-06  Score=65.93  Aligned_cols=41  Identities=20%  Similarity=0.509  Sum_probs=34.7

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN  231 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~  231 (305)
                      .|+.+    ...|+.+|++|||.|+++|. +++|+.||+.+|+|++
T Consensus        37 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~s   81 (81)
T 1n69_A           37 ECDRLGPGMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCDE   81 (81)
T ss_dssp             HGGGGCTTHHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC-
T ss_pred             HHHHcCcHHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCCC
Confidence            56666    34699999999998888887 6999999999999974

>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*

Probab=98.05  E-value=2.1e-06  Score=64.79  Aligned_cols=36  Identities=22%  Similarity=0.379  Sum_probs=32.7

Q ss_pred             HHHHHHHHhhhchHHHHHhcC-CChHHHhhhcCCCcc
Q psy4241         196 KKKKRCLLTEETVTPKVLSSQ-MNPDVVCSVAGLCNN  231 (305)
Q Consensus       196 ~~ck~~V~~Y~~~Ii~~L~~~-~~P~~VC~~iglC~~  231 (305)
                      ..|+.+|++|+|.|+++|.++ .+|+.||+.+|+|++
T Consensus        47 ~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~s   83 (83)
T 4ddj_A           47 ASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCES   83 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCCc
Confidence            368999999999999999999 599999999999974

>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A

Probab=98.03  E-value=1.2e-06  Score=69.08  Aligned_cols=41  Identities=15%  Similarity=0.271  Sum_probs=36.7

Q ss_pred             ccccc-------hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCc
Q psy4241         190 PTRRL-------KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCN  230 (305)
Q Consensus       190 ~C~~l-------~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~  230 (305)
                      .|+.+       ...|+.||++|+|.||++|.++++|+.||+.+|+|+
T Consensus        52 ~C~~lp~~ipf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~   99 (99)
T 2js9_A           52 ECKKLFHTIPFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP   99 (99)
T ss_dssp             HHHTGGGGSTTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred             HHHcCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence            67766       235899999999999999999999999999999996

>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1

Probab=97.94  E-value=7.2e-06  Score=61.26  Aligned_cols=39  Identities=8%  Similarity=0.011  Sum_probs=34.8

Q ss_pred             cccccch----HHHHHHHHhhhchHHHHHhcCCChHHHhhhcC
Q psy4241         189 FPTRRLK----KKKKRCLLTEETVTPKVLSSQMNPDVVCSVAG  227 (305)
Q Consensus       189 ~~C~~l~----~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~ig  227 (305)
                      ..|+.++    ..|+.||++|+|.|+++|.++.+|+.||+.++
T Consensus        32 ~vC~~l~~~~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik   74 (74)
T 1l9l_A           32 RVCRTGRSRWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR   74 (74)
T ss_dssp             HGGGSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred             HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence            4788883    36899999999999999999999999999875

>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2

Probab=97.85  E-value=4.3e-06  Score=82.67  Aligned_cols=86  Identities=22%  Similarity=0.332  Sum_probs=63.4

Q ss_pred             ccchhh---hccCccccccCcCCCCcchhhhccc--------------cCCCCCCcchhhHHHHHHHHHHhcccchHHHH
Q psy4241          54 RGQSFW---CEDLASAASCGATGHCIQAVWSHMK--------------VKEDGDDVCKICKNMVGQARDQLQSNETQQDL  116 (305)
Q Consensus        54 ~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~~--------------~~~~~~~~C~~C~~vV~~v~~~L~~n~te~~I  116 (305)
                      ||+.+|   -+.+.|..+|..+|+|.........              ....++..|.+|+++|.+++.+|++|.|+++|
T Consensus       296 yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I  375 (478)
T 1qdm_A          296 YGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLI  375 (478)
T ss_dssp             THHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             hhhHHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHH
Confidence            788887   5677899999999999876321100              01234578999999999999999999999999


Q ss_pred             HHHHHhccCcCCCc--chhhhhHHH
Q psy4241         117 KAVFEGSCNLVPVK--VIREGCDKL  139 (305)
Q Consensus       117 ~~~L~~~C~~lP~~--~~~~~C~~l  139 (305)
                      ..+++++|..+|..  .+.-.|..+
T Consensus       376 ~~~~~~~C~~~~~~~g~~~v~C~~~  400 (478)
T 1qdm_A          376 LDYVNQLCNRLPSPMGESAVDCGSL  400 (478)
T ss_dssp             HHHHHHHTTCBCCSSSCCEECGGGG
T ss_pred             HHHHHHHhhccCCCCCeEEeecccc
Confidence            99999999999852  245678753

>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}

Probab=97.35  E-value=7.8e-05  Score=57.30  Aligned_cols=40  Identities=20%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             ccccc-------hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241         190 PTRRL-------KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC  229 (305)
Q Consensus       190 ~C~~l-------~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC  229 (305)
                      .|+++       ...|+.++++|.+.|++.|.++.+|++||+.+++|
T Consensus        41 ~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C   87 (87)
T 3s64_A           41 GCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC   87 (87)
T ss_dssp             HHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred             HHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence            68777       24699999999999999999999999999999998

>3s63_A Na-SLP-1, saposin-like protein; lipid-binding, lipid binding protein; 2.70A {Necator americanus}

Probab=96.70  E-value=0.0056  Score=47.88  Aligned_cols=79  Identities=16%  Similarity=0.331  Sum_probs=71.2

Q ss_pred             CcchhhHHHHHHHHHHhccc-chHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCC-Chhhhcccccccc
Q psy4241          91 DVCKICKNMVGQARDQLQSN-ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQM-NPDVVCSVAGLCN  168 (305)
Q Consensus        91 ~~C~~C~~vV~~v~~~L~~n-~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~-~P~~IC~~lglC~  168 (305)
                      ..|+.|..+.+-+-..+..+ .+...+...|...|...+.  |+..|-.++...++.|++.+..+- +|-.+|..+.-|.
T Consensus         5 ~nCd~Cv~VL~cVfGhfgksV~SkR~L~~kL~htCKRyfq--YRrrCL~~~K~n~~~If~~mqpg~ydPi~~C~e~qEC~   82 (117)
T 3s63_A            5 ETCDLCQIALRTVFGHFGGNIPSRRKLVHQLKHECKRHFN--YRRRCLLLMKVNSDLIFREMTDGSFKPMEVCLIMRECN   82 (117)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHTTCTT--THHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHTTSSC
T ss_pred             cccHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhHHHHHHhcCCCCCCchhHHHHHHHhc
Confidence            35999999999998888776 5788999999999999985  999999999999999999998866 9999999999998


Q ss_pred             Ccc
Q psy4241         169 NAA  171 (305)
Q Consensus       169 ~~~  171 (305)
                      .-.
T Consensus        83 ~~~   85 (117)
T 3s63_A           83 PHD   85 (117)
T ss_dssp             TTS
T ss_pred             ccC
Confidence            654

>2w50_A ArMet-like protein 1; MANF, CDNF, saposin, secreted, ER stress, alternative splicing, hormone, growth factor, neurotrophic factor; 1.60A {Homo sapiens}

Probab=84.69  E-value=1.2  Score=34.90  Aligned_cols=73  Identities=15%  Similarity=0.235  Sum_probs=56.0

Q ss_pred             cchhhHHHHHHHHHHhccc---chHHHHHHHHHhccCcCCCcchhhhhHHHHH------hhHHHHHHHHHcCCChhhhcc
Q psy4241          92 VCKICKNMVGQARDQLQSN---ETQQDLKAVFEGSCNLVPVKVIREGCDKLVD------EFVPELIEVLSSQMNPDVVCS  162 (305)
Q Consensus        92 ~C~~C~~vV~~v~~~L~~n---~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~------~Y~p~II~~L~~~~~P~~IC~  162 (305)
                      .|.+|..+++.+.+.|...   .....|+++|.+.|...-+ .-...|-.+-.      .-...+.+-|.-++.++.||.
T Consensus         5 ~CEVCvk~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~k~-KEnr~CYyiga~~dsat~il~evskPlS~~mP~~KiCe   83 (102)
T 2w50_A            5 DCEVCKEFLNRFYKSLIDRGVNFSLDTIEKELISFCLDTKG-KENRLCYYLGATKDAATKILSEVTRPMSVHMPAMKICE   83 (102)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTCCH-HHHHHHHHTTCSTTSCHHHHHHHHHHHTTTCCHHHHHH
T ss_pred             CchhhHHHHHHHHHhcchhccccCHHHHHHHHHHHHhhccC-CccceeEecCCchHHHHHHHHHhccccccCCCHHHHHH
Confidence            6999999999999988774   2678999999999999865 35667765532      234456667777889999998


Q ss_pred             ccc
Q psy4241         163 VAG  165 (305)
Q Consensus       163 ~lg  165 (305)
                      .+.
T Consensus        84 kLk   86 (102)
T 2w50_A           84 KLK   86 (102)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	305
d2gtga1	78	a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens)	7e-19
d1n69a_	78	a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [Tax	8e-18
d1nkla_	78	a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [Tax	7e-17
d1of9a_	77	a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica	3e-16
d1l9la_	74	a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Hom	3e-14
d1qdma1	104	a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Horde	2e-06
d1qdma1	104	a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Horde	9e-06

>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]} Length = 78

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Saposin C
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 7e-19
 Identities = 20/79 (25%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 90  DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIE 149
           D  C++C+ +V +    + +N+T++++   F+  C+ +P  +  E C ++VD +   ++ 
Sbjct: 1   DVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEE-CQEVVDTYGSSILS 59

Query: 150 VLSSQMNPDVVCSVAGLCN 168
           +L  +++P++VCS+  LC+
Sbjct: 60  ILLEEVSPELVCSMLHLCS 78

>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]} Length = 78

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Saposin B
domain: Saposin B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 8e-18
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 91  DVCKICKNMVGQARDQLQSNETQQD-LKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIE 149
           DVC+ C  MV   +  +++N T    L    +  C+ +    + + C   + ++    I+
Sbjct: 2   DVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLG-PGMADICKNYISQYSEIAIQ 60

Query: 150 VLSSQMNPDVVCSVAGLCN 168
           ++   M P  +C++ G C+
Sbjct: 61  MM-MHMQPKEICALVGFCD 78

>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: NK-lysin, NKL
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 72.0 bits (176), Expect = 7e-17
 Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 91  DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEV 150
             C+ C+ ++ +  D +     +  +       C+ + +  +R  C K++  F+  +   
Sbjct: 2   YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI--LRGLCKKIMRSFLRRISWD 59

Query: 151 LSSQMNPDVVCSVAGLC 167
           + +   P  +C    +C
Sbjct: 60  ILTGKKPQAICVDIKIC 76

>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]} Length = 77

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Ameobapore A
domain: Ameobapore A
species: Entamoeba histolytica [TaxId: 5759]

 Score = 70.0 bits (171), Expect = 3e-16
 Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 89  GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELI 148
           G+ +C +C  ++    + L + +    +K      CN      I   C K++D  + +LI
Sbjct: 1   GEILCNLCTGLINTL-ENLLTTKGADKVKDYISSLCNKAS-GFIATLCTKVLDFGIDKLI 58

Query: 149 EVLSSQMNPDVVCSVAGLC 167
           +++  +++ + +C+    C
Sbjct: 59  QLIEDKVDANAICAKIHAC 77

>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Granulysin, NKG5 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (157), Expect = 3e-14
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 93  CKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLS 152
            + C  +V +   ++    TQ+ +       C     +  R+ C   +  +   +I+ L 
Sbjct: 4   YRTCLTIVQKL-KKMVDKPTQRSVSNAATRVCRTGRSR-WRDVCRNFMRRYQSRVIQGLV 61

Query: 153 SQMNPDVVCS 162
           +      +C 
Sbjct: 62  AGETAQQICE 71

>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 104

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Swaposin
domain: (Pro)phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 10/45 (22%), Positives = 24/45 (53%)

Query: 131 VIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNNAAIDRL 175
           V+ + C  +V ++  +++++L ++  P  +CS  GLC       +
Sbjct: 1   VVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGV 45

>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 104

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Swaposin
domain: (Pro)phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 41.6 bits (97), Expect = 9e-06
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 84  KVKEDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP 128
                 D +C  C+  V   ++QL  N+TQ  +       CN +P
Sbjct: 60  SNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLP 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	305
d1of9a_	77	Ameobapore A {Entamoeba histolytica [TaxId: 5759]}	99.73
d1nkla_	78	NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}	99.72
d2gtga1	78	Saposin C {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1n69a_	78	Saposin B {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1l9la_	74	Granulysin, NKG5 protein {Human (Homo sapiens) [Ta	99.68
d1qdma1	104	(Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4	99.52
d1qdma1	104	(Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4	99.18
d2gtga1	78	Saposin C {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1of9a_	77	Ameobapore A {Entamoeba histolytica [TaxId: 5759]}	98.18
d1nkla_	78	NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}	98.11
d1n69a_	78	Saposin B {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1l9la_	74	Granulysin, NKG5 protein {Human (Homo sapiens) [Ta	97.74

>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Ameobapore A
domain: Ameobapore A
species: Entamoeba histolytica [TaxId: 5759]

Probab=99.73  E-value=1.3e-18  Score=129.94  Aligned_cols=77  Identities=19%  Similarity=0.526  Sum_probs=72.1

Q ss_pred             CCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241          89 GDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC  167 (305)
Q Consensus        89 ~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC  167 (305)
                      ++..|.+|+.+|++++++++ |.|+++|.++|+++|+.+|+ .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus         1 G~~~C~~C~~~v~~~~~l~~-~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC   77 (77)
T d1of9a_           1 GEILCNLCTGLINTLENLLT-TKGADKVKDYISSLCNKASG-FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC   77 (77)
T ss_dssp             CCSSHHHHHHHHHHHHHHCS-SSCSHHHHHHHHHHHTTCSS-TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred             CCcchHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHCCh-HHHHHhHHHHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence            35789999999999999884 56889999999999999997 7999999999999999999999999999999999999

>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: NK-lysin, NKL
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.72  E-value=3e-18  Score=127.86  Aligned_cols=77  Identities=14%  Similarity=0.466  Sum_probs=74.0

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhcccccccc
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN  168 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~  168 (305)
                      |..|.+|+++|+.++++|++|.++++|.++++++|+.+|.  ++.+|+.+|++|+|.|+++|.++++|++||+.+|+|.
T Consensus         1 G~~C~~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C~~lp~--~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC~   77 (78)
T d1nkla_           1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI--LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK   77 (78)
T ss_dssp             CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS--THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred             CCccHhhHHHHHHHHHHHcCCccHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCcCC
Confidence            4679999999999999999999999999999999999994  8999999999999999999999999999999999996

>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Saposin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5e-18  Score=126.33  Aligned_cols=78  Identities=26%  Similarity=0.707  Sum_probs=75.0

Q ss_pred             CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhcccccccc
Q psy4241          90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN  168 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~  168 (305)
                      +..|.+|+.+|+.++++|+++.|+++|.++++++|+.+|. .++.+|+.+|++|+|.|++.|.++++|++||..+|+|+
T Consensus         1 di~C~~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lCs   78 (78)
T d2gtga1           1 DVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS   78 (78)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred             CCccHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCc-chhhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCcC
Confidence            3579999999999999999999999999999999999997 68999999999999999999999999999999999996

>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Saposin B
domain: Saposin B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.8e-18  Score=127.18  Aligned_cols=77  Identities=23%  Similarity=0.582  Sum_probs=71.2

Q ss_pred             CCcchhhHHHHHHHHHHhcccch-HHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhcccccccc
Q psy4241          90 DDVCKICKNMVGQARDQLQSNET-QQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCN  168 (305)
Q Consensus        90 ~~~C~~C~~vV~~v~~~L~~n~t-e~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~  168 (305)
                      |..|.+|+.+|+.++++|.+|.| ++.|.++++++|+.+|. .++.+|+.+|++|+|.|+++|. +++|++||+.+|+|.
T Consensus         1 G~~C~~C~~~v~~v~~~l~~n~t~~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~l~lC~   78 (78)
T d1n69a_           1 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP-GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD   78 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT-THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred             CCchHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHhCCh-HHHHHhHHHHHHHHHHHHHHHH-cCCHHHHHhHcCCCC
Confidence            45799999999999999999887 66799999999999997 6999999999999999999985 589999999999994

>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Granulysin, NKG5 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.1e-17  Score=122.58  Aligned_cols=73  Identities=14%  Similarity=0.292  Sum_probs=68.4

Q ss_pred             CcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccc
Q psy4241          91 DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAG  165 (305)
Q Consensus        91 ~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lg  165 (305)
                      ..|..|+++|+++++++ +|.|+++|.++|+++|+.+|+ .++..|+.||++|+|.||++|.++++|++||..|+
T Consensus         2 ~~c~tC~~vv~~ve~l~-~n~t~~~I~~~l~~~C~~lp~-~~~~~C~~lv~~Y~~~ii~~l~~~~~P~~IC~~lk   74 (74)
T d1l9la_           2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS-RWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR   74 (74)
T ss_dssp             HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred             CccHHHHHHHHHHHHHh-CCCCHHHHHHHHHhHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHhhC
Confidence            46999999999999877 578999999999999999997 69999999999999999999999999999999874

>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Swaposin
domain: (Pro)phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.52  E-value=1.1e-15  Score=119.68  Aligned_cols=93  Identities=14%  Similarity=0.221  Sum_probs=64.7

Q ss_pred             hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchhhhhhhcCCC---CCCCCCCCCCCCCCcchHHHHHHHHHH
Q psy4241         195 KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPA---PKTSTPTKDDNSDCKNCASFADLVTKK  271 (305)
Q Consensus       195 ~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~~~~~~~~~~---~~~~~~~~~~~~~C~~Ce~vV~~v~~~  271 (305)
                      ...|+.||++|+|.|+++|.++++|+.||+.+|+|++...........+.   .........+++.|.+|+++|.+++..
T Consensus         3 s~eC~~~V~~Y~~~ii~~L~~~~~P~~IC~~lglC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~v~~v~~~   82 (104)
T d1qdma1           3 SQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQ   82 (104)
T ss_dssp             CHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHhCCcccccccccchhhhhhhhccccccccCCCCCchhhHHHHHHHHHHH
Confidence            34689999999999999999999999999999999986654332111110   001112345677899999999999999


Q ss_pred             HhhhchhhhhcCCCCc
Q psy4241         272 FNAASKQDVTNDPFGS  287 (305)
Q Consensus       272 L~~n~ted~~~~~~~~  287 (305)
                      |.+|+|++.|.++|+.
T Consensus        83 l~~n~Te~eI~~~l~~   98 (104)
T d1qdma1          83 LAQNKTQDLILDYVNQ   98 (104)
T ss_dssp             HHTTCCHHHHHHHHHH
T ss_pred             HHccccHHHHHHHHHH
Confidence            9999999999998865

>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Swaposin
domain: (Pro)phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.18  E-value=2.1e-12  Score=100.64  Aligned_cols=80  Identities=25%  Similarity=0.393  Sum_probs=62.1

Q ss_pred             ccccc-----ccchhh---hccCccccccCcCCCCcchhhhcc--------------ccCCCCCCcchhhHHHHHHHHHH
Q psy4241          49 SPECA-----RGQSFW---CEDLASAASCGATGHCIQAVWSHM--------------KVKEDGDDVCKICKNMVGQARDQ  106 (305)
Q Consensus        49 ~~~C~-----~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~--------------~~~~~~~~~C~~C~~vV~~v~~~  106 (305)
                      +.+|.     |||..+   -+++.|..+|+.+|+|........              .....++..|.+|+++|++++.+
T Consensus         3 s~eC~~~V~~Y~~~ii~~L~~~~~P~~IC~~lglC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~v~~v~~~   82 (104)
T d1qdma1           3 SQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQ   82 (104)
T ss_dssp             CHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHhCCcccccccccchhhhhhhhccccccccCCCCCchhhHHHHHHHHHHH
Confidence            56785     999888   578999999999999975532110              01234567799999999999999


Q ss_pred             hcccchHHHHHHHHHhccCcCC
Q psy4241         107 LQSNETQQDLKAVFEGSCNLVP  128 (305)
Q Consensus       107 L~~n~te~~I~~~L~~~C~~lP  128 (305)
                      |.+|.|+++|+++|+++|+.||
T Consensus        83 l~~n~Te~eI~~~l~~vC~~LP  104 (104)
T d1qdma1          83 LAQNKTQDLILDYVNQLCNRLP  104 (104)
T ss_dssp             HHTTCCHHHHHHHHHHHTTCBC
T ss_pred             HHccccHHHHHHHHHHHHhhCc
Confidence            9999999999999999999998

>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Saposin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.9e-07  Score=65.57  Aligned_cols=42  Identities=21%  Similarity=0.401  Sum_probs=37.8

Q ss_pred             cccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCc
Q psy4241         189 FPTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCN  230 (305)
Q Consensus       189 ~~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~  230 (305)
                      ..|+.+    ...|+.+|++|+|.|+++|.++++|+.||+.+|+|+
T Consensus        33 ~~C~~lp~~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lCs   78 (78)
T d2gtga1          33 KMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS   78 (78)
T ss_dssp             HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred             HHHHhCCcchhhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCcC
Confidence            367776    356999999999999999999999999999999996

>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Ameobapore A
domain: Ameobapore A
species: Entamoeba histolytica [TaxId: 5759]

Probab=98.18  E-value=4.8e-07  Score=65.88  Aligned_cols=40  Identities=8%  Similarity=0.186  Sum_probs=36.4

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC  229 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC  229 (305)
                      .|+.+    ...|+.+|++|+|.|+++|.++++|+.||+.+|+|
T Consensus        34 ~C~~lp~~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC   77 (77)
T d1of9a_          34 LCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC   77 (77)
T ss_dssp             HHTTCSSTTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred             HHHHCChHHHHHhHHHHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence            57666    45699999999999999999999999999999999

>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: NK-lysin, NKL
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.11  E-value=8.3e-07  Score=64.51  Aligned_cols=41  Identities=12%  Similarity=0.208  Sum_probs=36.7

Q ss_pred             ccccc---hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCc
Q psy4241         190 PTRRL---KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCN  230 (305)
Q Consensus       190 ~C~~l---~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~  230 (305)
                      .|+.+   ...|+.||++|+|.|+++|.++++|+.||+.+|+|.
T Consensus        34 ~C~~lp~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC~   77 (78)
T d1nkla_          34 VCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK   77 (78)
T ss_dssp             HHHHSCSTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred             HHhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCcCC
Confidence            56666   446999999999999999999999999999999996

>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Saposin B
domain: Saposin B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.6e-06  Score=63.31  Aligned_cols=40  Identities=20%  Similarity=0.514  Sum_probs=34.8

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCc
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCN  230 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~  230 (305)
                      .|+.+    ...|+.||++|+|.|+++|. +++|++||+.+|+|.
T Consensus        35 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~l~lC~   78 (78)
T d1n69a_          35 ECDRLGPGMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD   78 (78)
T ss_dssp             HGGGGCTTHHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred             HHHhCChHHHHHhHHHHHHHHHHHHHHHH-cCCHHHHHhHcCCCC
Confidence            57776    34699999999999999985 699999999999994

>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Granulysin, NKG5 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.2e-05  Score=57.95  Aligned_cols=38  Identities=8%  Similarity=0.039  Sum_probs=33.7

Q ss_pred             ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcC
Q psy4241         190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAG  227 (305)
Q Consensus       190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~ig  227 (305)
                      .|+.+    ...|+.||++|+|.|+++|.++++|+.||+.+.
T Consensus        33 ~C~~lp~~~~~~C~~lv~~Y~~~ii~~l~~~~~P~~IC~~lk   74 (74)
T d1l9la_          33 VCRTGRSRWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR   74 (74)
T ss_dssp             GGGSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHhhC
Confidence            68777    346899999999999999999999999999874