Psyllid ID: psy4384
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 661 | 2.2.26 [Sep-21-2011] | |||||||
| Q9UBL3 | 628 | Set1/Ash2 histone methylt | yes | N/A | 0.744 | 0.783 | 0.469 | 1e-130 | |
| Q91X20 | 623 | Set1/Ash2 histone methylt | yes | N/A | 0.744 | 0.789 | 0.467 | 1e-129 | |
| O60070 | 652 | Set1 complex component as | yes | N/A | 0.718 | 0.728 | 0.258 | 6e-43 | |
| Q96I59 | 477 | Probable asparagine--tRNA | no | N/A | 0.263 | 0.364 | 0.392 | 1e-28 | |
| Q8BGV0 | 477 | Probable asparagine--tRNA | no | N/A | 0.260 | 0.360 | 0.368 | 5e-28 | |
| Q55FI3 | 460 | Probable asparagine--tRNA | yes | N/A | 0.232 | 0.334 | 0.360 | 2e-24 | |
| Q87A82 | 466 | Asparagine--tRNA ligase O | yes | N/A | 0.229 | 0.326 | 0.406 | 2e-24 | |
| Q2SJV9 | 465 | Asparagine--tRNA ligase O | yes | N/A | 0.237 | 0.337 | 0.369 | 3e-24 | |
| Q9PAF5 | 466 | Asparagine--tRNA ligase O | yes | N/A | 0.229 | 0.326 | 0.406 | 6e-24 | |
| Q15UN9 | 465 | Asparagine--tRNA ligase O | yes | N/A | 0.217 | 0.309 | 0.395 | 3e-23 |
| >sp|Q9UBL3|ASH2L_HUMAN Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens GN=ASH2L PE=1 SV=1 | Back alignment and function desciption |
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Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 328/513 (63%), Gaps = 21/513 (4%)
Query: 4 RNFNLIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSNTGLESFKKNQAMFPQ 63
R +EL C C WF +PFM NY F C C ++G F + QA +
Sbjct: 108 RQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNTYFLRKQANLKE 167
Query: 64 MCITAIGNLM-QTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRAL 122
MC++A+ NL Q+ ++ +P+ FSK+K+IIPFI+ +W+ MTT R +W I++ +
Sbjct: 168 MCLSALANLTWQSRTQDEHPKTMFSKDKDIIPFIDKYWECMTTRQRPGKMTWPNNIVKTM 227
Query: 123 AKETNVLFT----------CNESQEQYGLIDKDLAHIKPNYEQMIKGGHIKVT---DMGI 169
+KE +V E ++GL+D+DL++I P Y+ + + + + GI
Sbjct: 228 SKERDVFLVKEHPDPGSKDPEEDYPKFGLLDQDLSNIGPAYDNQKQSSAVSTSGNLNGGI 287
Query: 170 QSSGSNKGRGAKRKM-PGETGVVSKRGRGAGGDAAVPKLPAHGYPLDHPFNKDGYRYILA 228
+ S KGRGAKRK G T +K+ R +A +LP HGYPL+HPFNKDGYRYILA
Sbjct: 288 AAGSSGKGRGAKRKQQDGGTTGTTKKARSDPLFSAQ-RLPPHGYPLEHPFNKDGYRYILA 346
Query: 229 EPDPHAPFRQEFDESTETAGKPIPGWLYRTLAPSHVLLALHDRAPQLRISEDRLAVTGDK 288
EPDPHAP ++ E AGKPIPG LYR VLLALHDRAPQL+IS+DRL V G+K
Sbjct: 347 EPDPHAPDPEKL-ELDCWAGKPIPGDLYRACLYERVLLALHDRAPQLKISDDRLTVVGEK 405
Query: 289 GYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQTPLGYDKFGYSWRSRKG 348
GY MVRA++ V G WY+E T++EMP +A R+GW Q NLQ PLGYDKF YSWRS+KG
Sbjct: 406 GYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGYDKFSYSWRSKKG 465
Query: 349 TRFHECRGKHYSEGYSEGDTLGFLIHLPYRNQNS-YVPRTFKDKPLVKFKCHLYYEEKDK 407
T+FH+ GKHYS GY +GD LGF I+LP + + +P T+KDK L+KFK +LY+EEKD
Sbjct: 466 TKFHQSIGKHYSSGYGQGDVLGFYINLPEDTETAKSLPDTYKDKALIKFKSYLYFEEKDF 525
Query: 408 VTEALKRLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSLHKNCTVSVNFGPHFKHA 467
V +A K L+ S+I+FYKNG +QGVA++DI+ G Y+P +SL+K+CTVS+NFGP FK+
Sbjct: 526 VDKAEKSLKQTPHSEIIFYKNGVNQGVAYKDIFEGVYFPAISLYKSCTVSINFGPCFKY- 584
Query: 468 LPTEEFPNVRGMWERSEESICEQSMADVLYLTE 500
P ++ R M + ++ E ++ADVLY E
Sbjct: 585 -PPKDL-TYRPMSDMGWGAVVEHTLADVLYHVE 615
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Component of the Set1/Ash2 histone methyltransferase (HMT) complex, a complex that specifically methylates 'Lys-4' of histone H3, but not if the neighboring 'Lys-9' residue is already methylated. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. May function as a transcriptional regulator. May play a role in hematopoiesis. Homo sapiens (taxid: 9606) |
| >sp|Q91X20|ASH2L_MOUSE Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus GN=Ash2l PE=1 SV=1 | Back alignment and function description |
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| >sp|O60070|ASH2_SCHPO Set1 complex component ash2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ash2 PE=4 SV=1 | Back alignment and function description |
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| >sp|Q96I59|SYNM_HUMAN Probable asparagine--tRNA ligase, mitochondrial OS=Homo sapiens GN=NARS2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q8BGV0|SYNM_MOUSE Probable asparagine--tRNA ligase, mitochondrial OS=Mus musculus GN=Nars2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q55FI3|SYNM_DICDI Probable asparagine--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=asnS2 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q87A82|SYN_XYLFT Asparagine--tRNA ligase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=asnS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q2SJV9|SYN_HAHCH Asparagine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396) GN=asnS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9PAF5|SYN_XYLFA Asparagine--tRNA ligase OS=Xylella fastidiosa (strain 9a5c) GN=asnS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q15UN9|SYN_PSEA6 Asparagine--tRNA ligase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=asnS PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 661 | ||||||
| 340718499 | 576 | PREDICTED: set1/Ash2 histone methyltrans | 0.763 | 0.876 | 0.708 | 0.0 | |
| 383855396 | 576 | PREDICTED: set1/Ash2 histone methyltrans | 0.763 | 0.876 | 0.700 | 0.0 | |
| 322786711 | 589 | hypothetical protein SINV_13294 [Solenop | 0.763 | 0.857 | 0.687 | 0.0 | |
| 328776887 | 576 | PREDICTED: set1/Ash2 histone methyltrans | 0.763 | 0.876 | 0.716 | 0.0 | |
| 307181485 | 574 | Set1/Ash2 histone methyltransferase comp | 0.762 | 0.878 | 0.694 | 0.0 | |
| 380027790 | 576 | PREDICTED: set1/Ash2 histone methyltrans | 0.763 | 0.876 | 0.714 | 0.0 | |
| 189241520 | 569 | PREDICTED: similar to trithorax protein | 0.762 | 0.885 | 0.699 | 0.0 | |
| 270000937 | 571 | hypothetical protein TcasGA2_TC011210 [T | 0.762 | 0.882 | 0.696 | 0.0 | |
| 350401934 | 576 | PREDICTED: set1/Ash2 histone methyltrans | 0.763 | 0.876 | 0.706 | 0.0 | |
| 307206132 | 579 | Set1/Ash2 histone methyltransferase comp | 0.763 | 0.872 | 0.689 | 0.0 |
| >gi|340718499|ref|XP_003397703.1| PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2-like [Bombus terrestris] | Back alignment and taxonomy information |
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Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/515 (70%), Positives = 413/515 (80%), Gaps = 10/515 (1%)
Query: 1 GKERNFNLIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSNTGLESFKKNQAM 60
KERN N+IEL CA+C WFHESCI YQ+GKLVPFMMNY+F+CKNCS TGLESFKKNQA
Sbjct: 61 AKERNLNIIELLCASCSRWFHESCIGYQLGKLVPFMMNYIFMCKNCSPTGLESFKKNQAP 120
Query: 61 FPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILR 120
FPQMC+TAI NL+Q S KE + F K+K+IIPFIE HWD MTT PRRVTQSWH TI R
Sbjct: 121 FPQMCVTAIANLLQMSQKENEQKTFFHKDKDIIPFIECHWDSMTTMPRRVTQSWHATIHR 180
Query: 121 ALAKETNVLFTCNESQEQ---YGLIDKDLAHIKPNYEQMIKGGHIKVTDMGIQS----SG 173
AL K+ LFT +E+ +GLI DL IKPNYE MIKGGH+KVT+MG+Q SG
Sbjct: 181 ALLKDVGTLFTIDENSSDGQLFGLICSDLQMIKPNYEAMIKGGHLKVTEMGVQHVVPLSG 240
Query: 174 SNKGRGAKRKMPGETGVVSKRGRGAGGDAAVPKLPAHGYPLDHPFNKDGYRYILAEPDPH 233
+GR AKRK PGE +G G D PKLPAHGYPL+HPFNKDGYRYILAEPDPH
Sbjct: 241 GFRGRNAKRKFPGEGTGAGPGKKGRGSDMTAPKLPAHGYPLEHPFNKDGYRYILAEPDPH 300
Query: 234 APFRQEFDESTETAGKPIPGWLYRTLAPSHVLLALHDRAPQLRISEDRLAVTGDKGYCMV 293
APFRQEFDES++ AGKPIPGWLYR L+PS VLLALHDRAPQLRISEDRLAVTG+KGYCMV
Sbjct: 301 APFRQEFDESSDWAGKPIPGWLYRALSPSTVLLALHDRAPQLRISEDRLAVTGEKGYCMV 360
Query: 294 RATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQTPLGYDKFGYSWRSRKGTRFHE 353
RAT+ V GTWYWEATIEEMPEGSATR+GWGQEYANLQ PLGYDKFGYSWRSRKGTRFHE
Sbjct: 361 RATHNVSRGTWYWEATIEEMPEGSATRLGWGQEYANLQAPLGYDKFGYSWRSRKGTRFHE 420
Query: 354 CRGKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKVTEALK 413
+GKHYS GY EGDTLGFL+ LP + S++P T+KD+PLVKFK HLYYEEKD+V EALK
Sbjct: 421 SKGKHYSNGYGEGDTLGFLVILPDTHDASHLPNTYKDRPLVKFKSHLYYEEKDQVPEALK 480
Query: 414 RLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSLHKNCTVSVNFGPHFKHALPTEEF 473
L+ L+ S+I+FYKNG +QG AF DI G YYP VS+HK+ TVSVNFGP+FK P +
Sbjct: 481 ALKPLEGSKIIFYKNGVNQGEAFIDINKGAYYPTVSIHKSATVSVNFGPNFK--CPPGDI 538
Query: 474 PNVRGMWERSEESICEQSMADVLYLTENSGKLKLD 508
RGM +R+EE+I EQSMAD+LY TEN GKL+LD
Sbjct: 539 -TFRGMHDRAEEAIAEQSMADILYFTENEGKLRLD 572
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Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383855396|ref|XP_003703199.1| PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|322786711|gb|EFZ13081.1| hypothetical protein SINV_13294 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|328776887|ref|XP_397014.4| PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307181485|gb|EFN69077.1| Set1/Ash2 histone methyltransferase complex subunit ASH2 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|380027790|ref|XP_003697600.1| PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|189241520|ref|XP_968500.2| PREDICTED: similar to trithorax protein ash2 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|270000937|gb|EEZ97384.1| hypothetical protein TcasGA2_TC011210 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|350401934|ref|XP_003486312.1| PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|307206132|gb|EFN84212.1| Set1/Ash2 histone methyltransferase complex subunit ASH2 [Harpegnathos saltator] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 661 | ||||||
| FB|FBgn0000139 | 572 | ash2 "absent, small, or homeot | 0.756 | 0.874 | 0.627 | 9.3e-178 | |
| UNIPROTKB|F1NLI7 | 612 | ASH2L "Uncharacterized protein | 0.744 | 0.803 | 0.476 | 9.2e-123 | |
| UNIPROTKB|E1BEP4 | 629 | ASH2L "Uncharacterized protein | 0.744 | 0.782 | 0.469 | 9.2e-123 | |
| UNIPROTKB|Q9UBL3 | 628 | ASH2L "Set1/Ash2 histone methy | 0.742 | 0.781 | 0.470 | 1.9e-122 | |
| MGI|MGI:1344416 | 623 | Ash2l "ash2 (absent, small, or | 0.742 | 0.788 | 0.468 | 4e-122 | |
| RGD|1305632 | 623 | Ash2l "ash2 (absent, small, or | 0.742 | 0.788 | 0.468 | 5.1e-122 | |
| UNIPROTKB|E2R3Y0 | 630 | ASH2L "Uncharacterized protein | 0.742 | 0.779 | 0.468 | 2.2e-121 | |
| UNIPROTKB|I3L7I5 | 607 | ASH2L "Uncharacterized protein | 0.689 | 0.751 | 0.483 | 1.6e-118 | |
| UNIPROTKB|F5H8F7 | 489 | ASH2L "Set1/Ash2 histone methy | 0.694 | 0.938 | 0.483 | 1.4e-117 | |
| WB|WBGene00012458 | 572 | ash-2 [Caenorhabditis elegans | 0.732 | 0.846 | 0.342 | 1.9e-76 |
| FB|FBgn0000139 ash2 "absent, small, or homeotic discs 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 1726 (612.6 bits), Expect = 9.3e-178, P = 9.3e-178
Identities = 318/507 (62%), Positives = 384/507 (75%)
Query: 1 GKERNFNLIELFCANCKCWFHESCISYQIGK--LVPFMMNYVFICKNCSNTGLESFKKNQ 58
GKERN N++EL CA C W HE+C+SYQ+GK L+PF+ NYVF+CKNCS +GLESF+K+Q
Sbjct: 56 GKERNLNIVELLCATCSRWVHETCVSYQLGKGKLLPFITNYVFVCKNCSASGLESFRKSQ 115
Query: 59 AMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTI 118
A QMC AI N+ Q + ++G + FSK+KEIIP+IE +W+ MTT PRR+TQSW+ T+
Sbjct: 116 ATISQMCHCAIANMQQAASRDGRRQIQFSKDKEIIPYIEQYWEAMTTMPRRLTQSWYSTV 175
Query: 119 LRALAKETNVLFTCNESQEQ---YGLIDKDLAHIKPNYEQMIKGGHIKVTDMGIQSSGSN 175
R+L K+ LFT E E YGL +DL IKPNYE M K G +++TD G + +
Sbjct: 176 QRSLVKDVQTLFTYEEHAEHGAMYGLFHQDLRIIKPNYESMSKSGALRLTDDGYTQASLS 235
Query: 176 KGRGAKRKMPG-ETGVVSKRGRGAGGDAAVPKLPAHGYPLDHPFNKDGYRYILAEPDPHA 234
K KRK PG ++G K+GR + A KLP HGYPL+HPFNKDGYRYILAEPDPHA
Sbjct: 236 KNNRQKRKFPGTDSGPTGKKGRPSSDITANVKLPPHGYPLEHPFNKDGYRYILAEPDPHA 295
Query: 235 PFRQEFDESTETAGKPIPGWLYRTLAPSHVLLALHDRAPQLRISEDRLAVTGDKGYCMVR 294
PFRQEFDES++ AGKPIPGWLYR L P VLLALHDRAPQL+ISEDRLAVTG++GYCMVR
Sbjct: 296 PFRQEFDESSDWAGKPIPGWLYRILVPHSVLLALHDRAPQLKISEDRLAVTGERGYCMVR 355
Query: 295 ATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQTPLGYDKFGYSWRSRKGTRFHEC 354
AT+ V G WY+E TIEEMP+G+ATR+GWG+EY NLQ PLGYDKFGYSWRSRKGT+F E
Sbjct: 356 ATHSVNRGCWYFEVTIEEMPDGAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTES 415
Query: 355 RGKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKVTEALKR 414
GKHYS+ Y EGDTLGFLI LP Y+P TFKD+PLVKFK HLYYE+KDK+TE LK
Sbjct: 416 HGKHYSDAYVEGDTLGFLIELPEEASLDYLPNTFKDRPLVKFKSHLYYEDKDKITETLKN 475
Query: 415 LQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSLHKNCTVSVNFGPHFKHALPTEEFP 474
L L S+I F+KNG+SQGVAF+DIYAG Y+P +S+HK+ TVSVNFGP FK+ E
Sbjct: 476 LHILQGSRIEFFKNGQSQGVAFEDIYAGSYFPAISIHKSATVSVNFGPAFKYPEVLVEH- 534
Query: 475 NVRGMWERSEESICEQSMADVLYLTEN 501
+GM +R EE I EQ +AD LYLTE+
Sbjct: 535 KAKGMHDRVEELITEQCLADTLYLTEH 561
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| UNIPROTKB|F1NLI7 ASH2L "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BEP4 ASH2L "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9UBL3 ASH2L "Set1/Ash2 histone methyltransferase complex subunit ASH2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1344416 Ash2l "ash2 (absent, small, or homeotic)-like (Drosophila)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1305632 Ash2l "ash2 (absent, small, or homeotic)-like (Drosophila)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R3Y0 ASH2L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3L7I5 ASH2L "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F5H8F7 ASH2L "Set1/Ash2 histone methyltransferase complex subunit ASH2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| WB|WBGene00012458 ash-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q91X20 | ASH2L_MOUSE | No assigned EC number | 0.4678 | 0.7443 | 0.7897 | yes | N/A |
| Q9UBL3 | ASH2L_HUMAN | No assigned EC number | 0.4697 | 0.7443 | 0.7834 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.1.1 | 0.691 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 661 | |||
| cd12872 | 149 | cd12872, SPRY_Ash2, SPRY domain in Ash2 | 3e-67 | |
| cd00776 | 322 | cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/As | 2e-46 | |
| PRK03932 | 450 | PRK03932, asnC, asparaginyl-tRNA synthetase; Valid | 3e-43 | |
| COG0017 | 435 | COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetas | 1e-38 | |
| TIGR00457 | 453 | TIGR00457, asnS, asparaginyl-tRNA synthetase | 1e-34 | |
| PLN02221 | 572 | PLN02221, PLN02221, asparaginyl-tRNA synthetase | 3e-24 | |
| PLN02532 | 633 | PLN02532, PLN02532, asparagine-tRNA synthetase | 1e-23 | |
| PTZ00425 | 586 | PTZ00425, PTZ00425, asparagine-tRNA ligase; Provis | 9e-23 | |
| pfam00152 | 345 | pfam00152, tRNA-synt_2, tRNA synthetases class II | 2e-22 | |
| PRK05159 | 437 | PRK05159, aspC, aspartyl-tRNA synthetase; Provisio | 8e-22 | |
| PLN02603 | 565 | PLN02603, PLN02603, asparaginyl-tRNA synthetase | 4e-20 | |
| smart00449 | 122 | smart00449, SPRY, Domain in SPla and the RYanodine | 1e-18 | |
| cd11709 | 118 | cd11709, SPRY, SPRY domain | 7e-17 | |
| pfam00622 | 125 | pfam00622, SPRY, SPRY domain | 1e-16 | |
| PRK06462 | 335 | PRK06462, PRK06462, asparagine synthetase A; Revie | 8e-16 | |
| cd12873 | 155 | cd12873, SPRY_DDX1, SPRY domain associated with DE | 6e-15 | |
| TIGR00458 | 428 | TIGR00458, aspS_nondisc, nondiscriminating asparty | 3e-14 | |
| cd12885 | 132 | cd12885, SPRY_RanBP_like, SPRY domain in Ran bindi | 1e-10 | |
| cd00669 | 269 | cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA syn | 1e-09 | |
| cd12884 | 176 | cd12884, SPRY_hnRNP, SPRY domain in heterogeneous | 4e-09 | |
| PLN02850 | 530 | PLN02850, PLN02850, aspartate-tRNA ligase | 7e-09 | |
| cd12882 | 128 | cd12882, SPRY_RNF123, SPRY domain at N-terminus of | 1e-07 | |
| COG1190 | 502 | COG1190, LysU, Lysyl-tRNA synthetase (class II) [T | 4e-06 | |
| PRK00484 | 491 | PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | 9e-06 | |
| cd12909 | 153 | cd12909, SPRY_RanBP9_10, SPRY domain in Ran bindin | 4e-04 | |
| cd12876 | 187 | cd12876, SPRY_SOCS3, SPRY domain in the suppressor | 8e-04 | |
| smart00249 | 47 | smart00249, PHD, PHD zinc finger | 0.001 | |
| cd12889 | 172 | cd12889, SPRY_PRY_TRIM67_9, PRY/SPRY domain in tri | 0.001 | |
| PTZ00401 | 550 | PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Prov | 0.002 |
| >gnl|CDD|240452 cd12872, SPRY_Ash2, SPRY domain in Ash2 | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 3e-67
Identities = 81/194 (41%), Positives = 102/194 (52%), Gaps = 48/194 (24%)
Query: 275 LRISEDRLAVTGDKGYCMVRATNYVGHGTWYWEATIEEMP-EGSATRMGWGQEYANLQTP 333
L++SEDRL VTG+KGY M RA + V G WY+E I E E R+GW + A+LQ P
Sbjct: 1 LKLSEDRLTVTGEKGYRMARANHGVREGKWYFEVKILEGGGETGHVRVGWSRREASLQAP 60
Query: 334 LGYDKFGYSWRSRKGTRFHECRGKHYSE-GYSEGDTLGFLIHLPYRNQNSYVPRTFKDKP 392
+GYDK+ Y++R + G +FH RGK Y E G+ EGD +G LI LP
Sbjct: 61 VGYDKYSYAYRDKDGEKFHLSRGKPYGEPGFKEGDVIGCLITLPK--------------- 105
Query: 393 LVKFKCHLYYEEKDKVTEALKRLQTLDQSQIVFYKNGKSQGVAFQDI-YAGYYYPCVSLH 451
I F+KNGKSQGVAF+DI G YYP VSL+
Sbjct: 106 ------------------------------IEFFKNGKSQGVAFEDIYGTGGYYPAVSLY 135
Query: 452 KNCTVSVNFGPHFK 465
TV +NFGP+F
Sbjct: 136 MGATVRLNFGPNFA 149
|
This SPRY domain is found at the C-terminus of Ash2 (absent, small, or homeotic discs 2) -like proteins, core components of all mixed-lineage leukemia (MLL) family histone methyltransferases. Ash2 is a member of the trithorax group of transcriptional regulators of the Hox genes. Recent studies show that the SPRY domain of Ash2 mediates the interaction with RbBP5 and has an important role in regulating the methyltransferase activity of MLL complexes. In yeast, Ash2 is involved in histone methylation and is required for the earliest stages of embryogenesis. Length = 149 |
| >gnl|CDD|238399 cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/AsnRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|235176 PRK03932, asnC, asparaginyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223096 COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232982 TIGR00457, asnS, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|177867 PLN02221, PLN02221, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|215291 PLN02532, PLN02532, asparagine-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|240414 PTZ00425, PTZ00425, asparagine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215753 pfam00152, tRNA-synt_2, tRNA synthetases class II (D, K and N) | Back alignment and domain information |
|---|
| >gnl|CDD|235354 PRK05159, aspC, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178213 PLN02603, PLN02603, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >gnl|CDD|240451 cd11709, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|216029 pfam00622, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|235808 PRK06462, PRK06462, asparagine synthetase A; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|240453 cd12873, SPRY_DDX1, SPRY domain associated with DEAD box gene DDX1 | Back alignment and domain information |
|---|
| >gnl|CDD|129550 TIGR00458, aspS_nondisc, nondiscriminating aspartyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|240465 cd12885, SPRY_RanBP_like, SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3 | Back alignment and domain information |
|---|
| >gnl|CDD|238358 cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1 | Back alignment and domain information |
|---|
| >gnl|CDD|215456 PLN02850, PLN02850, aspartate-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|240462 cd12882, SPRY_RNF123, SPRY domain at N-terminus of ring finger protein 123 | Back alignment and domain information |
|---|
| >gnl|CDD|224111 COG1190, LysU, Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|234778 PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|240489 cd12909, SPRY_RanBP9_10, SPRY domain in Ran binding proteins 9 and 10 | Back alignment and domain information |
|---|
| >gnl|CDD|240456 cd12876, SPRY_SOCS3, SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family | Back alignment and domain information |
|---|
| >gnl|CDD|214584 smart00249, PHD, PHD zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|240469 cd12889, SPRY_PRY_TRIM67_9, PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67 | Back alignment and domain information |
|---|
| >gnl|CDD|173592 PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 661 | |||
| KOG2626|consensus | 544 | 100.0 | ||
| COG0017 | 435 | AsnS Aspartyl/asparaginyl-tRNA synthetases [Transl | 100.0 | |
| KOG0554|consensus | 446 | 99.97 | ||
| PLN02532 | 633 | asparagine-tRNA synthetase | 99.97 | |
| PLN02603 | 565 | asparaginyl-tRNA synthetase | 99.97 | |
| PTZ00425 | 586 | asparagine-tRNA ligase; Provisional | 99.96 | |
| PLN02221 | 572 | asparaginyl-tRNA synthetase | 99.96 | |
| TIGR00458 | 428 | aspS_arch aspartyl-tRNA synthetase, archaeal type. | 99.96 | |
| PRK05159 | 437 | aspC aspartyl-tRNA synthetase; Provisional | 99.96 | |
| TIGR00457 | 453 | asnS asparaginyl-tRNA synthetase. In a multiple se | 99.96 | |
| KOG0349|consensus | 725 | 99.96 | ||
| PRK06462 | 335 | asparagine synthetase A; Reviewed | 99.96 | |
| PRK03932 | 450 | asnC asparaginyl-tRNA synthetase; Validated | 99.96 | |
| cd00776 | 322 | AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class | 99.95 | |
| PLN02850 | 530 | aspartate-tRNA ligase | 99.94 | |
| PTZ00401 | 550 | aspartyl-tRNA synthetase; Provisional | 99.94 | |
| KOG0556|consensus | 533 | 99.94 | ||
| KOG0555|consensus | 545 | 99.93 | ||
| TIGR00462 | 304 | genX lysyl-tRNA synthetase-like protein GenX. Many | 99.92 | |
| PRK12445 | 505 | lysyl-tRNA synthetase; Reviewed | 99.92 | |
| TIGR00499 | 496 | lysS_bact lysyl-tRNA synthetase, eukaryotic and no | 99.92 | |
| PF00152 | 335 | tRNA-synt_2: tRNA synthetases class II (D, K and N | 99.92 | |
| COG1190 | 502 | LysU Lysyl-tRNA synthetase (class II) [Translation | 99.9 | |
| PRK00484 | 491 | lysS lysyl-tRNA synthetase; Reviewed | 99.9 | |
| PLN02502 | 553 | lysyl-tRNA synthetase | 99.89 | |
| PTZ00417 | 585 | lysine-tRNA ligase; Provisional | 99.89 | |
| cd00775 | 329 | LysRS_core Lys_tRNA synthetase (LysRS) class II co | 99.89 | |
| PRK02983 | 1094 | lysS lysyl-tRNA synthetase; Provisional | 99.89 | |
| PTZ00385 | 659 | lysyl-tRNA synthetase; Provisional | 99.88 | |
| KOG4323|consensus | 464 | 99.88 | ||
| smart00449 | 122 | SPRY Domain in SPla and the RYanodine Receptor. Do | 99.88 | |
| cd00669 | 269 | Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl | 99.86 | |
| PF00622 | 124 | SPRY: SPRY domain; InterPro: IPR003877 The SPRY do | 99.85 | |
| KOG1885|consensus | 560 | 99.83 | ||
| PRK09350 | 306 | poxB regulator PoxA; Provisional | 99.82 | |
| COG2269 | 322 | Truncated, possibly inactive, lysyl-tRNA synthetas | 99.79 | |
| KOG4030|consensus | 197 | 99.74 | ||
| TIGR00459 | 583 | aspS_bact aspartyl-tRNA synthetase, bacterial type | 99.74 | |
| cd00777 | 280 | AspRS_core Asp tRNA synthetase (aspRS) class II co | 99.66 | |
| KOG3953|consensus | 242 | 99.65 | ||
| PLN02903 | 652 | aminoacyl-tRNA ligase | 99.62 | |
| KOG4367|consensus | 699 | 99.58 | ||
| PRK00476 | 588 | aspS aspartyl-tRNA synthetase; Validated | 99.58 | |
| PRK12820 | 706 | bifunctional aspartyl-tRNA synthetase/aspartyl/glu | 99.55 | |
| KOG2243|consensus | 5019 | 99.54 | ||
| COG0173 | 585 | AspS Aspartyl-tRNA synthetase [Translation, riboso | 99.33 | |
| KOG2411|consensus | 628 | 99.29 | ||
| KOG2243|consensus | 5019 | 99.04 | ||
| KOG1477|consensus | 469 | 98.78 | ||
| KOG1477|consensus | 469 | 97.4 | ||
| PF01409 | 247 | tRNA-synt_2d: tRNA synthetases class II core domai | 96.91 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 96.9 | |
| cd00496 | 218 | PheRS_alpha_core Phenylalanyl-tRNA synthetase (Phe | 96.83 | |
| cd00768 | 211 | class_II_aaRS-like_core Class II tRNA amino-acyl s | 96.67 | |
| PRK09537 | 417 | pylS pyrolysyl-tRNA synthetase; Reviewed | 96.48 | |
| PTZ00326 | 494 | phenylalanyl-tRNA synthetase alpha chain; Provisio | 96.36 | |
| PLN02853 | 492 | Probable phenylalanyl-tRNA synthetase alpha chain | 96.33 | |
| TIGR02367 | 453 | PylS pyrrolysyl-tRNA synthetase. PylS is the archa | 95.96 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 95.95 | |
| KOG2242|consensus | 558 | 95.73 | ||
| KOG2784|consensus | 483 | 95.52 | ||
| PRK00488 | 339 | pheS phenylalanyl-tRNA synthetase subunit alpha; V | 95.5 | |
| TIGR00468 | 294 | pheS phenylalanyl-tRNA synthetase, alpha subunit. | 95.25 | |
| PRK04172 | 489 | pheS phenylalanyl-tRNA synthetase subunit alpha; P | 95.24 | |
| COG0016 | 335 | PheS Phenylalanyl-tRNA synthetase alpha subunit [T | 95.15 | |
| PLN02788 | 402 | phenylalanine-tRNA synthetase | 94.84 | |
| TIGR00470 | 533 | sepS O-phosphoseryl-tRNA(Cys) synthetase. This fam | 94.73 | |
| PF00587 | 173 | tRNA-synt_2b: tRNA synthetase class II core domain | 94.34 | |
| cd00778 | 261 | ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) | 91.95 | |
| PF00250 | 96 | Fork_head: Fork head domain; InterPro: IPR001766 T | 89.22 | |
| cd00670 | 235 | Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t | 89.17 | |
| TIGR00442 | 397 | hisS histidyl-tRNA synthetase. This model finds a | 88.0 | |
| cd00773 | 261 | HisRS-like_core Class II Histidinyl-tRNA synthetas | 87.15 | |
| cd00772 | 264 | ProRS_core Prolyl-tRNA synthetase (ProRS) class II | 87.12 | |
| PRK00037 | 412 | hisS histidyl-tRNA synthetase; Reviewed | 86.84 | |
| cd00779 | 255 | ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla | 83.79 | |
| PRK12444 | 639 | threonyl-tRNA synthetase; Reviewed | 83.77 | |
| PRK08661 | 477 | prolyl-tRNA synthetase; Provisional | 81.85 | |
| cd00771 | 298 | ThrRS_core Threonyl-tRNA synthetase (ThrRS) class | 80.36 | |
| KOG2752|consensus | 345 | 80.19 |
| >KOG2626|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-109 Score=885.70 Aligned_cols=493 Identities=46% Similarity=0.834 Sum_probs=452.0
Q ss_pred CCCCccccceEecccccchhhHhhhc--cccCCccccceeEEEEcccCCCCCccceeeccCChHHHHHHHhhhccccccc
Q psy4384 1 GKERNFNLIELFCANCKCWFHESCIS--YQIGKLVPFMMNYVFICKNCSNTGLESFKKNQAMFPQMCITAIGNLMQTSIK 78 (661)
Q Consensus 1 g~~~~~~~~~lqC~~C~~wfH~~C~~--~~~~~~l~~~~~y~F~C~~C~~~g~e~~~r~~~~w~~~~~laLynL~~~~~~ 78 (661)
|++||+++++|||..|.+|||+.|+. .+.++++|++++|+|+|+.|.++|.|.|++.+++|++||++||+||+.....
T Consensus 26 e~~r~l~~~elqcs~clk~~~~~~~~~~~~~~s~~pf~t~y~fvc~~c~~~~~e~f~~~~a~~~~~~~t~ia~~~~~~~~ 105 (544)
T KOG2626|consen 26 EGERNLGIVELQCSTCLKWFHLPTLEAFHLIKSSLPFMTSYEFVCKECTPSGREHFERKQASLKAMCFTTIANLTCPSYP 105 (544)
T ss_pred ccccccCceeeEeeecccccccccccccccccccCCcccceeEEeccccCcchhhhhhcccchhhcchhhhcccCCcccc
Confidence 68999999999999999999986665 2334489999999999999999999999999999999999999999866543
Q ss_pred -cCCCc-cccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEeecCCcc---eeeecCCCCCCCCchh
Q psy4384 79 -EGNPR-FTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTCNESQE---QYGLIDKDLAHIKPNY 153 (661)
Q Consensus 79 -~~~~k-~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~g~~~~---~w~L~~~~~~~~~p~~ 153 (661)
|..+. .||+++++|+|||++||+.|++.++ +++|+.++..+|+++-.++|...++.. +|+|.++++.++.|+|
T Consensus 106 ~D~~~~~t~~~~~~eiip~ie~~w~~l~~~~~--~~~w~~~~~~~~~ke~~t~~~~~~~~~~~~~~al~~~nl~~~~p~~ 183 (544)
T KOG2626|consen 106 FDGSPMETYFSKKKEIIPYIEEYWEDLTTVPQ--KQTWRTNLSDTLSKERDTYFEVEEHRDPGKLFALANQNLSNIGPSY 183 (544)
T ss_pred ccccchhhhcccccccccchhhhhhhhccccc--ccchhhhhhhhhhhcccceeEEeccCCCcchhhhcccchhhcCccc
Confidence 55555 8999999999999999999997654 899999999999999555777666554 9999999999999999
Q ss_pred HH-hhhccceeeecCCcCCCCC--CCCCCCCCCCCCCCCCcccCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCceeEec
Q psy4384 154 EQ-MIKGGHIKVTDMGIQSSGS--NKGRGAKRKMPGETGVVSKRGRGAGGDA-AVPKLPAHG-YPLDHPFNKDGYRYILA 228 (661)
Q Consensus 154 ~~-~~~~g~~~~~~~~~~~~~~--~k~~~~kr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~p~n~~g~~y~~~ 228 (661)
+. ++++|+...++..+..+++ .|.|..+|+.+++++.++++.|. .+|. .+..+|+|| ++++||++|+||||+++
T Consensus 184 ~~~~~~~~~~~~~~q~~~~p~~~~~k~r~a~~~~p~~~~v~g~~~r~-~sd~~~s~~k~p~~~v~~~~p~~k~~~~~~l~ 262 (544)
T KOG2626|consen 184 DEVQSGIGAKMHKKQVDETPPLSSGKCREASREAPSEAPVTGKKIKL-ISDAKESIHKPPNGCVPIEHPFSKDGYRYILA 262 (544)
T ss_pred cchhhcccccccccccCCCCCccccccccccccccCCCCccccccee-hhhcccccccCCCCCccccCCCCCCCceeeEe
Confidence 99 9999999998666555544 47888999988788888999887 6666 777799999 99999999999999999
Q ss_pred cCCCCCCCcccccccccCCCCCCCcccccccCCC--ceEeCcCCCCCCeEEeCCCcEEEeCCCeeEEEEeEEEeCCeEEE
Q psy4384 229 EPDPHAPFRQEFDESTETAGKPIPGWLYRTLAPS--HVLLALHDRAPQLRISEDRLAVTGDKGYCMVRATNYVGHGTWYW 306 (661)
Q Consensus 229 ~~~p~~p~~~~~~~~~~~~~~~~p~~~yr~~~~~--~v~~s~~dr~~~l~ls~d~l~v~~~~g~~~vRa~~~v~~G~~Yf 306 (661)
++||++|.++.| .++||.++||.+.++ .|+++++||++++.||+|+|+|||++||+||||+|+|.+|.|||
T Consensus 263 e~~P~~p~~~~~-------ak~iP~~~yr~l~~~~~tv~l~~hdrA~ql~Is~drlt~tgeKGy~MvRAshgv~~G~WYF 335 (544)
T KOG2626|consen 263 EPDPSAPEDIKF-------AKPIPGFLYRALLSPMDTVNLSWHDRAEQLKISEDRLTATGEKGYRMVRASHGVLEGAWYF 335 (544)
T ss_pred ccCCCCcccccc-------cccCCcchhhhhcCchhhhhhhhhcccccccccccceeeecccceeeeeecccccccceeE
Confidence 999999998876 789999999999866 99999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCCcEEEEEeCCCCCCCCCCCCcCccEEEEcCCCcEEeCCCCcccCCCCCCCCEEEEEeeCCCCCC-CCCCC
Q psy4384 307 EATIEEMPEGSATRMGWGQEYANLQTPLGYDKFGYSWRSRKGTRFHECRGKHYSEGYSEGDTLGFLIHLPYRNQ-NSYVP 385 (661)
Q Consensus 307 Ev~i~~~~~~~~vriG~a~~~~~l~~pvG~d~~syg~~~~~G~~~h~s~~~~yg~~~~~GDVIG~~i~l~~~~~-~~~~~ 385 (661)
||+|+++++++|+||||++..++||||||||++|||||+.+|+++|++.+++|..+|++||||||+|+||.... ...+|
T Consensus 336 EI~vd~~pd~~a~RlGwsq~~g~LqApvGYdkfsY~wRdk~GtKfh~s~gk~Y~~gf~qGDvLGf~I~LP~~~~~~~~lp 415 (544)
T KOG2626|consen 336 EIKVDEMPDDAAIRLGWSQLYGNLQAPVGYDKFSYGWRDKKGTKFHESLGKHYSDGFGQGDVLGFYINLPKDLSPEKYLP 415 (544)
T ss_pred EEEeecCCCccceeeeccccccccccccccccccccccccCCcchhhhhhhhhhhhccCCceEEEEEecCCcccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998544 47899
Q ss_pred CccCCccccccccccchhccchhhHHHhhcccCCCcEEEEEECCeeccccceecc-CCceEEEEEecCCcEEEEeCCCCC
Q psy4384 386 RTFKDKPLVKFKCHLYYEEKDKVTEALKRLQTLDQSQIVFYKNGKSQGVAFQDIY-AGYYYPCVSLHKNCTVSVNFGPHF 464 (661)
Q Consensus 386 ~~~~d~~~i~~k~~~~~e~~d~~~~~~~~~~~~~~s~I~f~kNG~~~G~AF~~i~-~g~yyPavSl~~g~~v~~NFG~~F 464 (661)
+++||+++|+||+|+|||+.|++.++.++|..+|||.|.|||||++||+||+||+ .|.||||||||++++|++||||.|
T Consensus 416 ~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~~pgS~I~f~KNG~~qG~Ay~ni~~~G~YyPaIS~yks~tv~~nfGP~F 495 (544)
T KOG2626|consen 416 LTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKIKPGSEIEFFKNGVSQGVAYENIYKAGAYYPAISIYKSCTVKFNFGPQF 495 (544)
T ss_pred ccccccceeeeeeeeEEEccchhhhhhhccccCCCceEEEeecccchhhhhhhhhccccccceeeecccceEEEeccccc
Confidence 9999999999999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred CCCCCCCCCCCccccccccchhhhccchhhhhhhhhccce
Q psy4384 465 KHALPTEEFPNVRGMWERSEESICEQSMADVLYLTENSGK 504 (661)
Q Consensus 465 ~~~p~~~~~~~~~p~~~~~~e~~~e~~laD~l~lve~~~q 504 (661)
+|||-+.++ ..++|++|++|||+||+|||+||++|.+.-
T Consensus 496 ~~~p~~lg~-~~~~m~~~~~eqi~E~~l~DiLy~ve~e~~ 534 (544)
T KOG2626|consen 496 RYPPCVLGN-RAVGMSDRYKEQIAEDTLADILYEVEQEVD 534 (544)
T ss_pred cCCccccCC-CcccccchhhhhHHHHHHHHHHHHhhhhhc
Confidence 999987655 345699999999999999999999987443
|
|
| >COG0017 AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG0554|consensus | Back alignment and domain information |
|---|
| >PLN02532 asparagine-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02603 asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PTZ00425 asparagine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >PLN02221 asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00458 aspS_arch aspartyl-tRNA synthetase, archaeal type | Back alignment and domain information |
|---|
| >PRK05159 aspC aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00457 asnS asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >KOG0349|consensus | Back alignment and domain information |
|---|
| >PRK06462 asparagine synthetase A; Reviewed | Back alignment and domain information |
|---|
| >PRK03932 asnC asparaginyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >cd00776 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain | Back alignment and domain information |
|---|
| >PLN02850 aspartate-tRNA ligase | Back alignment and domain information |
|---|
| >PTZ00401 aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >KOG0556|consensus | Back alignment and domain information |
|---|
| >KOG0555|consensus | Back alignment and domain information |
|---|
| >TIGR00462 genX lysyl-tRNA synthetase-like protein GenX | Back alignment and domain information |
|---|
| >PRK12445 lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00499 lysS_bact lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial | Back alignment and domain information |
|---|
| >PF00152 tRNA-synt_2: tRNA synthetases class II (D, K and N) ; InterPro: IPR004364 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >COG1190 LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK00484 lysS lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PLN02502 lysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PTZ00417 lysine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd00775 LysRS_core Lys_tRNA synthetase (LysRS) class II core domain | Back alignment and domain information |
|---|
| >PRK02983 lysS lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PTZ00385 lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >KOG4323|consensus | Back alignment and domain information |
|---|
| >smart00449 SPRY Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function | Back alignment and domain information |
|---|
| >KOG1885|consensus | Back alignment and domain information |
|---|
| >PRK09350 poxB regulator PoxA; Provisional | Back alignment and domain information |
|---|
| >COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG4030|consensus | Back alignment and domain information |
|---|
| >TIGR00459 aspS_bact aspartyl-tRNA synthetase, bacterial type | Back alignment and domain information |
|---|
| >cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain | Back alignment and domain information |
|---|
| >KOG3953|consensus | Back alignment and domain information |
|---|
| >PLN02903 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >KOG4367|consensus | Back alignment and domain information |
|---|
| >PRK00476 aspS aspartyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional | Back alignment and domain information |
|---|
| >KOG2243|consensus | Back alignment and domain information |
|---|
| >COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2411|consensus | Back alignment and domain information |
|---|
| >KOG2243|consensus | Back alignment and domain information |
|---|
| >KOG1477|consensus | Back alignment and domain information |
|---|
| >KOG1477|consensus | Back alignment and domain information |
|---|
| >PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >cd00496 PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain | Back alignment and domain information |
|---|
| >cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional | Back alignment and domain information |
|---|
| >PLN02853 Probable phenylalanyl-tRNA synthetase alpha chain | Back alignment and domain information |
|---|
| >TIGR02367 PylS pyrrolysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG2242|consensus | Back alignment and domain information |
|---|
| >KOG2784|consensus | Back alignment and domain information |
|---|
| >PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
| >TIGR00468 pheS phenylalanyl-tRNA synthetase, alpha subunit | Back alignment and domain information |
|---|
| >PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02788 phenylalanine-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00470 sepS O-phosphoseryl-tRNA(Cys) synthetase | Back alignment and domain information |
|---|
| >PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes | Back alignment and domain information |
|---|
| >cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PF00250 Fork_head: Fork head domain; InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [] | Back alignment and domain information |
|---|
| >cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >TIGR00442 hisS histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
| >cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK00037 hisS histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK12444 threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK08661 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >KOG2752|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 661 | ||||
| 3toj_A | 213 | Structure Of The Spry Domain Of Human Ash2l Length | 2e-60 | ||
| 3s32_A | 191 | Crystal Structure Of Ash2l N-Terminal Domain Length | 5e-21 | ||
| 3rsn_A | 177 | Crystal Structure Of The N-Terminal Region Of Human | 1e-20 | ||
| 1x54_A | 434 | Crystal Structure Of Asparaginyl-trna Synthetase Fr | 2e-18 | ||
| 2xgt_A | 435 | Asparaginyl-Trna Synthetase From Brugia Malayi Comp | 6e-12 | ||
| 1wyd_A | 429 | Crystal Structure Of Aspartyl-Trna Synthetase From | 7e-12 | ||
| 2xti_A | 437 | Asparaginyl-Trna Synthetase From Brugia Malayi Comp | 8e-12 | ||
| 3i7f_A | 548 | Aspartyl Trna Synthetase From Entamoeba Histolytica | 9e-12 | ||
| 3m4p_A | 456 | Entamoeba Histolytica Asparaginyl-Trna Synthetase ( | 7e-11 | ||
| 3nel_A | 438 | Aspartyl-Trna Synthetase Complexed With Aspartic Ac | 1e-10 | ||
| 1b8a_A | 438 | Aspartyl-trna Synthetase Length = 438 | 1e-10 | ||
| 1eov_A | 487 | Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.1 | 2e-10 | ||
| 1asy_A | 490 | Class Ii Aminoacyl Transfer Rna Synthetases: Crysta | 2e-10 | ||
| 1n9w_A | 422 | Crystal Structure Of The Non-Discriminating And Arc | 3e-06 |
| >pdb|3TOJ|A Chain A, Structure Of The Spry Domain Of Human Ash2l Length = 213 | Back alignment and structure |
|
| >pdb|3S32|A Chain A, Crystal Structure Of Ash2l N-Terminal Domain Length = 191 | Back alignment and structure |
| >pdb|3RSN|A Chain A, Crystal Structure Of The N-Terminal Region Of Human Ash2l Length = 177 | Back alignment and structure |
| >pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-trna Synthetase From Pyrococcus Horikoshii Complexed With Asparaginyl-adenylate Length = 434 | Back alignment and structure |
| >pdb|2XGT|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed With The Sulphamoyl Analogue Of Asparaginyl-Adenylate Length = 435 | Back alignment and structure |
| >pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Sulfolobus Tokodaii Length = 429 | Back alignment and structure |
| >pdb|2XTI|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg Length = 437 | Back alignment and structure |
| >pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica Length = 548 | Back alignment and structure |
| >pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs) In Complex With Asparaginyl-Adenylate Length = 456 | Back alignment and structure |
| >pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid Length = 438 | Back alignment and structure |
| >pdb|1B8A|A Chain A, Aspartyl-trna Synthetase Length = 438 | Back alignment and structure |
| >pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From Yeast Length = 487 | Back alignment and structure |
| >pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal Structure Of Yeast Aspartyl-Trna Synthetase Complexed With Trna Asp Length = 490 | Back alignment and structure |
| >pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus Length = 422 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 9e-73
Identities = 117/249 (46%), Positives = 151/249 (60%), Gaps = 38/249 (15%)
Query: 253 GWLYRTLAPSHVLLALHDRAPQLRISEDRLAVTGDKGYCMVRATNYVGHGTWYWEATIEE 312
G LYR VLLALHDRAPQL+IS+DRL V G+KGY MVRA++ V G WY+E T++E
Sbjct: 2 GDLYRACLYERVLLALHDRAPQLKISDDRLTVVGEKGYSMVRASHGVRKGAWYFEITVDE 61
Query: 313 MPEGSATRMGWGQEYANLQTPLGYDKFGYSWRSRKGTRFHECRGKHYSEGYSEGDTLGFL 372
MP +A R+GW Q NLQ PLGYDKF YSWRS+KGT+FH+ GKHYS GY +GD LGF
Sbjct: 62 MPPDTAARLGWSQPLGNLQAPLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFY 121
Query: 373 IHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKVTEALKRLQTLDQSQIVFYKNGKSQ 432
I+LP + S+I+FYKNG +Q
Sbjct: 122 INLPEDT-----------------------------------ISGRGSSEIIFYKNGVNQ 146
Query: 433 GVAFQDIYAGYYYPCVSLHKNCTVSVNFGPHFKHALPTEEFPNVRGMWERSEESICEQSM 492
GVA++DI+ G Y+P +SL+K+CTVS+NFGP FK+ + R M + ++ E ++
Sbjct: 147 GVAYKDIFEGVYFPAISLYKSCTVSINFGPCFKYPPKDLTY---RPMSDMGWGAVVEHTL 203
Query: 493 ADVLYLTEN 501
ADVLY E
Sbjct: 204 ADVLYHVET 212
|
| >3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A Length = 177 | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Length = 434 | Back alignment and structure |
|---|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Length = 435 | Back alignment and structure |
|---|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Length = 456 | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Length = 487 | Back alignment and structure |
|---|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Length = 548 | Back alignment and structure |
|---|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Length = 438 | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Length = 429 | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Length = 422 | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Length = 294 | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212 | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217 | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 72 | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} Length = 52 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 661 | |||
| 3toj_A | 213 | SET1/ASH2 histone methyltransferase complex subun; | 100.0 | |
| 3rsn_A | 177 | SET1/ASH2 histone methyltransferase complex subun; | 100.0 | |
| 2yyo_A | 171 | SPRY domain-containing protein 3; NPPSFA, national | 100.0 | |
| 3nem_A | 438 | Aspartyl-tRNA synthetase; rossmann fold, OB fold, | 99.97 | |
| 3m4p_A | 456 | Ehasnrs, asparaginyl-tRNA synthetase, putative; am | 99.96 | |
| 3i7f_A | 548 | Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi | 99.95 | |
| 2xgt_A | 435 | Asparaginyl-tRNA synthetase, cytoplasmic; ligase, | 99.95 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 99.95 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 99.93 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 99.93 | |
| 4ex5_A | 529 | Lysine--tRNA ligase; structural genomics, niaid, n | 99.93 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 99.92 | |
| 3emw_A | 217 | SPRY domain-containing SOCS box protein 2; apoptos | 99.92 | |
| 3bju_A | 521 | Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.91 | |
| 2jk9_A | 212 | SPRY domain-containing SOCS box protein 1; transcr | 99.91 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 99.91 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 99.9 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 99.9 | |
| 2afj_A | 226 | Gene rich cluster, C9 gene; beta sandwich, gene re | 99.87 | |
| 1l0w_A | 580 | Aspartyl-tRNA synthetase; space-grown crystal, dim | 99.85 | |
| 1c0a_A | 585 | Aspartyl tRNA synthetase; protein-RNA complex, lig | 99.82 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 99.74 | |
| 4ah6_A | 617 | Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo | 99.57 | |
| 2fbe_A | 201 | Predicted: similar to RET finger protein-like 1; d | 98.96 | |
| 2wl1_A | 191 | Pyrin, marenostrin; amyloidosis, polymorphism, cyt | 98.9 | |
| 3uv9_A | 186 | TRIM5alpha, tripartite motif-containing protein 5; | 98.88 | |
| 2vok_A | 188 | 52 kDa RO protein; polymorphism, immune system, me | 98.86 | |
| 3kb5_A | 193 | Tripartite motif-containing protein 72; B30.2, gus | 98.58 | |
| 2e63_A | 170 | KIAA1787 protein; structure genomics, neuralized d | 98.22 | |
| 1wep_A | 79 | PHF8; structural genomics, PHD domain, riken struc | 98.19 | |
| 4b3n_A | 602 | Maltose-binding periplasmic protein, tripartite mo | 98.04 | |
| 3kqi_A | 75 | GRC5, PHD finger protein 2; metal-binding, zinc-fi | 97.92 | |
| 1b7y_A | 350 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 97.64 | |
| 3o7a_A | 52 | PHD finger protein 13 variant; PHF13, zinc finger, | 97.63 | |
| 3o70_A | 68 | PHD finger protein 13; PHF13, structural genomics | 97.53 | |
| 2rhq_A | 294 | Phenylalanyl-tRNA synthetase alpha chain; heterote | 97.52 | |
| 1wee_A | 72 | PHD finger family protein; structural genomics, PH | 97.48 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 97.48 | |
| 12as_A | 330 | Asparagine synthetase; ligase, nitrogen fixation; | 97.29 | |
| 2yue_A | 168 | Protein neuralized; structure genomics, NEUZ(NHR) | 97.25 | |
| 1we9_A | 64 | PHD finger family protein; structural genomics, PH | 97.24 | |
| 1wem_A | 76 | Death associated transcription factor 1; structura | 97.07 | |
| 2kgg_A | 52 | Histone demethylase jarid1A; PHD finger, histone m | 97.04 | |
| 2rsd_A | 68 | E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant | 96.87 | |
| 2lv9_A | 98 | Histone-lysine N-methyltransferase MLL5; zinc fing | 96.79 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 96.64 | |
| 3kv5_D | 488 | JMJC domain-containing histone demethylation prote | 96.62 | |
| 2ri7_A | 174 | Nucleosome-remodeling factor subunit BPTF; zinc fi | 96.6 | |
| 2xb1_A | 105 | Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; | 96.46 | |
| 2vpb_A | 65 | Hpygo1, pygopus homolog 1; gene regulation, WNT si | 96.46 | |
| 2k16_A | 75 | Transcription initiation factor TFIID subunit 3; p | 96.45 | |
| 3pur_A | 528 | Lysine-specific demethylase 7 homolog; oxidoreduct | 96.35 | |
| 1wew_A | 78 | DNA-binding family protein; structural genomics, P | 96.32 | |
| 3kv4_A | 447 | PHD finger protein 8; epigenetics, histone CODE, c | 96.1 | |
| 3lqh_A | 183 | Histone-lysine N-methyltransferase MLL; PHD finger | 96.08 | |
| 2ku7_A | 140 | MLL1 PHD3-CYP33 RRM chimeric protein; transcriptio | 95.96 | |
| 1wen_A | 71 | Inhibitor of growth family, member 4; ING1-like pr | 95.92 | |
| 3l4g_A | 508 | Phenylalanyl-tRNA synthetase alpha chain; aminoacy | 95.87 | |
| 2g6q_A | 62 | Inhibitor of growth protein 2; protein-peptide com | 95.72 | |
| 1weu_A | 91 | Inhibitor of growth family, member 4; structural g | 95.69 | |
| 3c6w_A | 59 | P28ING5, inhibitor of growth protein 5; chromatin, | 95.48 | |
| 4bbq_A | 117 | Lysine-specific demethylase 2A; oxidoreductase, ub | 95.16 | |
| 2vnf_A | 60 | ING 4, P29ING4, inhibitor of growth protein 4; ace | 95.15 | |
| 3pco_A | 327 | Phenylalanyl-tRNA synthetase, alpha subunit; amino | 95.13 | |
| 1x4i_A | 70 | Inhibitor of growth protein 3; structural genomics | 95.05 | |
| 2jmi_A | 90 | Protein YNG1, ING1 homolog 1; PHD, histone, recogn | 94.57 | |
| 1f62_A | 51 | Transcription factor WSTF; Zn-finger; NMR {Homo sa | 94.24 | |
| 2l5u_A | 61 | Chromodomain-helicase-DNA-binding protein 4; CHD4, | 93.38 | |
| 2du3_A | 534 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 92.22 | |
| 2lri_C | 66 | Autoimmune regulator; Zn binding protein domain, a | 91.95 | |
| 2ysm_A | 111 | Myeloid/lymphoid or mixed-lineage leukemia protein | 91.8 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 90.86 | |
| 2odr_B | 648 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 90.63 | |
| 2odr_A | 665 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 90.57 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 90.57 | |
| 2odr_D | 685 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 90.49 | |
| 2du7_A | 549 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 90.42 | |
| 2odr_C | 701 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 90.34 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 89.28 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 88.82 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 88.11 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 87.61 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 87.46 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 87.01 | |
| 2e6r_A | 92 | Jumonji/ARID domain-containing protein 1D; PHD dom | 86.98 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 85.74 | |
| 2ku3_A | 71 | Bromodomain-containing protein 1; PHD finger, chro | 85.73 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 85.64 | |
| 2puy_A | 60 | PHD finger protein 21A; PHD finger, histone CODE, | 85.52 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 85.51 | |
| 3asl_A | 70 | E3 ubiquitin-protein ligase UHRF1; histone reader | 85.4 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 85.18 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 85.12 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 85.11 | |
| 2l43_A | 88 | N-teminal domain from histone H3.3, linker, PHD1 f | 84.69 | |
| 1mm2_A | 61 | MI2-beta; PHD, zinc finger, protein scaffold, DNA | 84.32 | |
| 1xwh_A | 66 | Autoimmune regulator; PHD domain, Zn binding domai | 83.9 | |
| 3o36_A | 184 | Transcription intermediary factor 1-alpha; TRIM24, | 83.79 | |
| 1vtn_C | 102 | HNF-3/FORK head DNA-recognition motif; protein-DNA | 83.78 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 83.78 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 83.35 | |
| 2yql_A | 56 | PHD finger protein 21A; PHD domain, structural gen | 83.35 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 83.22 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 83.19 | |
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 82.64 | |
| 3u5n_A | 207 | E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, b | 82.58 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 82.28 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 81.77 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 81.32 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 80.52 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 80.49 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 80.41 | |
| 2e6s_A | 77 | E3 ubiquitin-protein ligase UHRF2; PHD domain, str | 80.3 |
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-52 Score=417.05 Aligned_cols=212 Identities=55% Similarity=0.995 Sum_probs=188.2
Q ss_pred cccccccCCCceEeCcCCCCCCeEEeCCCcEEEeCCCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCCCCC
Q psy4384 253 GWLYRTLAPSHVLLALHDRAPQLRISEDRLAVTGDKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQT 332 (661)
Q Consensus 253 ~~~yr~~~~~~v~~s~~dr~~~l~ls~d~l~v~~~~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~l~~ 332 (661)
+++||++.+..|+||++|+++.|.||+|+++|++.++|++|||++++++|+|||||+|.+.+.+++++||||++.+++++
T Consensus 2 ~~~~~~~~~~~v~ld~~d~~~~l~ls~d~l~v~~~~~~~~vra~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~~ 81 (213)
T 3toj_A 2 GDLYRACLYERVLLALHDRAPQLKISDDRLTVVGEKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQA 81 (213)
T ss_dssp CGGGCCEEECCCCEEEEEECTTSEECTTSSEEECCSSCEEEEESCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTTS
T ss_pred ccchhhhcCCeEEechhhCCCCEEEcCCCcEEEeCCceeEEEeCCCccCCeEEEEEEEeecCCCceEEEEeccCCccccc
Confidence 68999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred CCCCcCccEEEEcCCCcEEeCCCCcccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhccchhhHHH
Q psy4384 333 PLGYDKFGYSWRSRKGTRFHECRGKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKVTEAL 412 (661)
Q Consensus 333 pvG~d~~syg~~~~~G~~~h~s~~~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~d~~~~~~ 412 (661)
++|+|.+||||++.+|+++|++++++||++|++||||||+||++..
T Consensus 82 ~~G~d~~S~gy~~~~G~~~h~~~~~~yg~~~~~GDvIGc~ld~~~~---------------------------------- 127 (213)
T 3toj_A 82 PLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPED---------------------------------- 127 (213)
T ss_dssp CTTSSTTEEEEETTTTCEEETTEEECCSCCCCTTCEEEEEEEECCC----------------------------------
T ss_pred CCCCCCCcEEEECCCCeEEeCCcCcccCCCCCCCCEEEEEEEcCCC----------------------------------
Confidence 9999999999999999999999999999999999999999999871
Q ss_pred hhcccCCCcEEEEEECCeeccccceeccCCceEEEEEecCCcEEEEeCCCCCCCCCCCCCCCCccccccccchhhhccch
Q psy4384 413 KRLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSLHKNCTVSVNFGPHFKHALPTEEFPNVRGMWERSEESICEQSM 492 (661)
Q Consensus 413 ~~~~~~~~s~I~f~kNG~~~G~AF~~i~~g~yyPavSl~~g~~v~~NFG~~F~~~p~~~~~~~~~p~~~~~~e~~~e~~l 492 (661)
....+++++|+||+||+.+|+||++|..|.||||||++.|++|++|||++|+|||++..| +||++|++++++||++
T Consensus 128 -~~~~~~~g~i~Ft~NG~~lg~aF~~~~~~~lyPavsl~~~~~v~~NFG~~F~~~p~~~~~---~~~~~~~~~~~~~~~~ 203 (213)
T 3toj_A 128 -TISGRGSSEIIFYKNGVNQGVAYKDIFEGVYFPAISLYKSCTVSINFGPCFKYPPKDLTY---RPMSDMGWGAVVEHTL 203 (213)
T ss_dssp ------CCCEEEEEETTEEEEEEEESCCSSCBEEEEEEESSCEEEEECSSSCSSCCSSCCC---EEGGGGGEEEECCC--
T ss_pred -ccccCCccEEEEEeCCeeeeeeEEcCCCCcEEEEEEcCCCCEEEEECCCCCccCCCCCce---EcHHHhccccccHHHH
Confidence 113445689999999999999999999999999999999999999999999999997668 9999999999999999
Q ss_pred hhhhhhhhcc
Q psy4384 493 ADVLYLTENS 502 (661)
Q Consensus 493 aD~l~lve~~ 502 (661)
||+||+||++
T Consensus 204 ~d~~~~~~~~ 213 (213)
T 3toj_A 204 ADVLYHVETE 213 (213)
T ss_dssp ----------
T ss_pred HHHHHHhhcC
Confidence 9999999863
|
| >3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* | Back alignment and structure |
|---|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A | Back alignment and structure |
|---|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A | Back alignment and structure |
|---|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 | Back alignment and structure |
|---|
| >1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A | Back alignment and structure |
|---|
| >1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
| >4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22 | Back alignment and structure |
|---|
| >2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
| >3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta} | Back alignment and structure |
|---|
| >2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B* | Back alignment and structure |
|---|
| >3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A | Back alignment and structure |
|---|
| >3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
| >12as_A Asparagine synthetase; ligase, nitrogen fixation; HET: AMP; 2.20A {Escherichia coli K12} SCOP: d.104.1.1 PDB: 11as_A* | Back alignment and structure |
|---|
| >2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* | Back alignment and structure |
|---|
| >2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group} | Back alignment and structure |
|---|
| >2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* | Back alignment and structure |
|---|
| >2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A* | Back alignment and structure |
|---|
| >2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A* | Back alignment and structure |
|---|
| >2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* | Back alignment and structure |
|---|
| >1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} | Back alignment and structure |
|---|
| >3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A | Back alignment and structure |
|---|
| >2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A | Back alignment and structure |
|---|
| >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A* | Back alignment and structure |
|---|
| >4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens} | Back alignment and structure |
|---|
| >2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A* | Back alignment and structure |
|---|
| >3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
| >1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* | Back alignment and structure |
|---|
| >1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* | Back alignment and structure |
|---|
| >2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
| >2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
| >2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
| >2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} | Back alignment and structure |
|---|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
| >3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B | Back alignment and structure |
|---|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A | Back alignment and structure |
|---|
| >1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A | Back alignment and structure |
|---|
| >3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A | Back alignment and structure |
|---|
| >1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A | Back alignment and structure |
|---|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
| >2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A* | Back alignment and structure |
|---|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
| >2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 661 | ||||
| d2fnja1 | 217 | b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi | 4e-20 | |
| d2afja1 | 213 | b.29.1.22 (A:12-224) SPRY domain-containing SOCS b | 6e-20 | |
| d1n9wa2 | 304 | d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (As | 5e-07 | |
| d1eova2 | 353 | d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (As | 2e-06 | |
| d1weva_ | 88 | g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu | 2e-04 | |
| d1wewa_ | 78 | g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale c | 0.001 | |
| d1wema_ | 76 | g.50.1.2 (A:) Death associated transcription facto | 0.001 | |
| d1weea_ | 72 | g.50.1.2 (A:) PHD finger protein At1g33420 {Thale | 0.003 |
| >d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: SPRY domain domain: LD34464p species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 87.5 bits (216), Expect = 4e-20
Identities = 28/215 (13%), Positives = 59/215 (27%), Gaps = 62/215 (28%)
Query: 270 DRAPQLRISEDRLAVT----GDKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQ 325
DR+ + + ED + +R + G WE G+ +G
Sbjct: 30 DRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCT 89
Query: 326 EYANL-----QTPLGYDKFGYSWRSRKGTRFHECRGKH---------YSEGYSEGDTLGF 371
A L Q+ +G + + W + +H+ + E + D
Sbjct: 90 ADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLV 149
Query: 372 LIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKVTEALKRLQTLDQSQIVFYKNGKS 431
+ + D+ + F + +
Sbjct: 150 ALDM-------------------------------------------DEGTLSFIVDQQY 166
Query: 432 QGVAFQDIYAGYYYPCVSLH-KNCTVSVNFGPHFK 465
G+AF+ + YP VS +C +++ +
Sbjct: 167 LGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLD 201
|
| >d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213 | Back information, alignment and structure |
|---|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Length = 304 | Back information, alignment and structure |
|---|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 353 | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78 | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 661 | |||
| d2fnja1 | 217 | LD34464p {Fruit fly (Drosophila melanogaster) [Tax | 99.95 | |
| d2afja1 | 213 | SPRY domain-containing SOCS box protein 2 {Mouse ( | 99.95 | |
| d1eova2 | 353 | Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S | 99.91 | |
| d1e1oa2 | 342 | Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g | 99.86 | |
| d1b8aa2 | 335 | Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ | 99.85 | |
| d1n9wa2 | 304 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 99.84 | |
| d1nnha_ | 293 | Hypothetical protein PF1951 {Archaeon Pyrococcus f | 99.79 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 99.66 | |
| d1c0aa3 | 346 | Aspartyl-tRNA synthetase (AspRS) {Escherichia coli | 99.65 | |
| d2fbea1 | 188 | Similar to Ret finger protein-like 1 {Human (Homo | 99.01 | |
| d2iwgb1 | 179 | 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96 | 98.88 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 97.63 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 97.4 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 97.17 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 96.88 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 96.67 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 95.72 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 95.61 | |
| d1jjca_ | 266 | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS | 95.53 | |
| d2pnxa1 | 51 | Inhibitor of growth protein 4, Ing4 {Homo sapiens | 95.17 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 95.14 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 93.76 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 93.71 | |
| d2c6ya1 | 98 | Interleukin enhancer binding factor {Human (Homo s | 83.45 | |
| d2a07f1 | 82 | Forkhead box protein P2, FOXP2 {Human (Homo sapien | 82.18 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 80.26 | |
| d1d5va_ | 94 | Adipocyte-transcription factor FREAC-11 (s12, fkh- | 80.03 |
| >d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: SPRY domain domain: LD34464p species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.95 E-value=1.1e-28 Score=245.50 Aligned_cols=162 Identities=16% Similarity=0.278 Sum_probs=141.0
Q ss_pred eEeCcCCCCCCeEEeCCCcEEEe----CCCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCCCC-----CCC
Q psy4384 264 VLLALHDRAPQLRISEDRLAVTG----DKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQ-----TPL 334 (661)
Q Consensus 264 v~~s~~dr~~~l~ls~d~l~v~~----~~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~l~-----~pv 334 (661)
.+||+.|++..+.|++|++.+.. ..++.+||++.++++|+|||||+|.....+++++|||++..++++ ..+
T Consensus 24 ~~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~~~~~~~~IGV~~~~~~~~~~~~~~~~ 103 (217)
T d2fnja1 24 HSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLV 103 (217)
T ss_dssp TSEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCSEEESSCCCT
T ss_pred ccCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecCCCCCeeEEEEEecccCcccCCccccc
Confidence 45999999999999999876642 458889999999999999999999876667789999999999884 469
Q ss_pred CCcCccEEEEcCCCcEEeCCCC---------cccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhcc
Q psy4384 335 GYDKFGYSWRSRKGTRFHECRG---------KHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEK 405 (661)
Q Consensus 335 G~d~~syg~~~~~G~~~h~s~~---------~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~ 405 (661)
|+|..||+|+..+|.++|++.. ..||+.|..||||||+||++.
T Consensus 104 G~~~~s~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGV~LD~d~---------------------------- 155 (217)
T d2fnja1 104 GSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDE---------------------------- 155 (217)
T ss_dssp TSSTTEEEEETTTTEEEESTTTSCCEESSTTCCTTCCCCCCSEEEEEEETTT----------------------------
T ss_pred cCCCCcceEecCCCEEEecCCCccccccCcccccCCccCCCCEEEEEEeCCC----------------------------
Confidence 9999999999999999997643 247789999999999999999
Q ss_pred chhhHHHhhcccCCCcEEEEEECCeeccccceeccCCceEEEEEe-cCCcEEEEeCCCCCCCCC
Q psy4384 406 DKVTEALKRLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSL-HKNCTVSVNFGPHFKHAL 468 (661)
Q Consensus 406 d~~~~~~~~~~~~~~s~I~f~kNG~~~G~AF~~i~~g~yyPavSl-~~g~~v~~NFG~~F~~~p 468 (661)
++|.|||||+.||+||++|..+.||||||. +.+++|+++|...++..|
T Consensus 156 ---------------gtLsF~kNG~~lGvAf~~l~~~~lyP~vs~~~~~~~v~~~~~~~~~~~~ 204 (217)
T d2fnja1 156 ---------------GTLSFIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDPEP 204 (217)
T ss_dssp ---------------TEEEEEETTEEEEEEECCCTTCCBEEEEEECCTTCEEEEEEEEEECSSC
T ss_pred ---------------CEEEEEECCEEeeEEEeCCCCCeEEEEEEeccCCcEEEEEEcCCcCCCC
Confidence 899999999999999999988899999995 568999999865554433
|
| >d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|