Psyllid ID: psy4430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MNVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPRYD
Secondary Structure (PSIPRED)
cccEEEEcEEcccccccccEEHHHHHHHHHHHHHHcccccccEEEEcccccEEEcEEEcccccEEEEEEccHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHccEEEEEEEEcccEEEEEEEEcccEEEEEEccccHHHHHHccccccc
Coil and Loop (DISEMBL)
mnvkvvrlqpfpekpvagdVLDLLETIRLVIEESlnqlpfskmdivtptgatyhglkyergncgvsvirsgeameqvqrgpryd
Flexible Loop (DISEMBL)
mnvkvvrlqpfpekpvagdVLDLLETIRLVIEEslnqlpfskmdiVTPTGATYHGLKYERGNCGVSVirsgeameqvqrgpryd
Low Complexity Region (SEG)
MNVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPRYD
Disordered region (IsUnstruct)
*************KPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIR***************
Disordered Region (DISOPRED)
*NVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPR**
Disordered Region (DISEMBL)
MNVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEA***********
Disordered Region (DISPRO)
MNVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSG*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNVKVVRLQPFPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPRYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
Q6NYU7	257	Uracil phosphoribosyltran	yes	N/A	0.595	0.194	0.68	3e-15
Q5ZIJ8	277	Uracil phosphoribosyltran	yes	N/A	0.904	0.274	0.518	8e-15
B1AVZ0	310	Uracil phosphoribosyltran	yes	N/A	0.595	0.161	0.66	2e-14
Q32LA4	306	Uracil phosphoribosyltran	yes	N/A	0.630	0.173	0.641	3e-14
Q96BW1	309	Uracil phosphoribosyltran	yes	N/A	0.595	0.161	0.66	3e-14
Q95KB0	309	Uracil phosphoribosyltran	N/A	N/A	0.595	0.161	0.66	3e-14
Q26998	244	Uracil phosphoribosyltran	N/A	N/A	0.666	0.229	0.5	9e-11
Q9FKS0	486	Uridine kinase-like prote	yes	N/A	0.642	0.111	0.537	1e-10
Q9LK34	483	Uridine kinase-like prote	no	N/A	0.642	0.111	0.537	1e-10
Q8VYB2	466	Uridine kinase-like prote	no	N/A	0.642	0.115	0.537	1e-10

>sp|Q6NYU7|UPP_DANRE Uracil phosphoribosyltransferase homolog OS=Danio rerio GN=uprt PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLV+EE LNQLP+S+  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 92  IRLVVEEGLNQLPYSECTVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQ 141

Danio rerio (taxid: 7955)

>sp|Q5ZIJ8|UPP_CHICK Uracil phosphoribosyltransferase homolog OS=Gallus gallus GN=UPRT PE=2 SV=1

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 3/79 (3%)

Query: 1   MNVKVVRLQPFPEKPVA--GD-VLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
           MN ++  LQ       A  GD V      IRLV+EE LNQLP+++  + TPTG  Y G+K
Sbjct: 83  MNDQIRELQTIIRDKTASRGDFVFSADRLIRLVVEERLNQLPYTECTVTTPTGYKYEGVK 142

Query: 58  YERGNCGVSVIRSGEAMEQ 76
           +E+GNCGVS++RSGEAMEQ
Sbjct: 143 FEKGNCGVSIMRSGEAMEQ 161

Gallus gallus (taxid: 9031)

>sp|B1AVZ0|UPP_MOUSE Uracil phosphoribosyltransferase homolog OS=Mus musculus GN=Uprt PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLV+EE LNQLP+ +  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 145 IRLVVEEGLNQLPYKECMVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQ 194

Mus musculus (taxid: 10090)

>sp|Q32LA4|UPP_BOVIN Uracil phosphoribosyltransferase homolog OS=Bos taurus GN=UPRT PE=2 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 43/53 (81%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
           IRLV+EE LNQLP+ +  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ  R
Sbjct: 141 IRLVVEEGLNQLPYEECMVTTPTGFKYEGVKFEKGNCGVSIMRSGEAMEQGLR 193

Bos taurus (taxid: 9913)

>sp|Q96BW1|UPP_HUMAN Uracil phosphoribosyltransferase homolog OS=Homo sapiens GN=UPRT PE=2 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLV+EE LNQLP+ +  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 144 IRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 193

Homo sapiens (taxid: 9606)

>sp|Q95KB0|UPP_MACFA Uracil phosphoribosyltransferase homolog OS=Macaca fascicularis GN=UPRT PE=2 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLV+EE LNQLP+ +  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 144 IRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 193

Macaca fascicularis (taxid: 9541)

>sp|Q26998|UPP_TOXGO Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ----VQRGPR 82
           IRL+IEE+LN+LPF K ++ TP   +YHG+ +    CGVS++R+GE+ME     V RG R
Sbjct: 70  IRLLIEEALNELPFEKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGCR 129

Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.

Toxoplasma gondii (taxid: 5811)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 9

>sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=UKL1 PE=1 SV=1

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
           IRLV+E  L  LPF++  +VTPTGA Y G+ + +  CGVS+IRSGE+ME   R 
Sbjct: 309 IRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVSIIRSGESMENALRA 362

Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 9

>sp|Q9LK34|UKL2_ARATH Uridine kinase-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=UKL2 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
           IRLV+E  L  LPF++  +VTPTG+ Y G+ + +  CGVSVIRSGE+ME   R 
Sbjct: 309 IRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRA 362

Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 9

>sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
           IRLV+E  L  LPF++  +VTPTG+ Y G+ + +  CGVSVIRSGE+ME   R 
Sbjct: 291 IRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRA 344

Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
242007915	228	Uracil phosphoribosyltransferase, putati	0.595	0.219	0.86	4e-18
383865225	241	PREDICTED: uracil phosphoribosyltransfer	0.595	0.207	0.82	9e-17
156544105	269	PREDICTED: uracil phosphoribosyltransfer	0.595	0.185	0.82	1e-16
340711769	241	PREDICTED: uracil phosphoribosyltransfer	0.595	0.207	0.8	2e-16
350402559	258	PREDICTED: LOW QUALITY PROTEIN: uracil p	0.595	0.193	0.8	2e-16
328778802	254	PREDICTED: uracil phosphoribosyltransfer	0.595	0.196	0.8	2e-16
307204329	226	Uracil phosphoribosyltransferase [Harpeg	0.595	0.221	0.8	2e-16
332025152	237	Uracil phosphoribosyltransferase [Acromy	0.595	0.210	0.78	4e-16
307189892	223	Uracil phosphoribosyltransferase [Campon	0.595	0.224	0.78	4e-16
322785833	252	hypothetical protein SINV_06976 [Solenop	0.595	0.198	0.78	4e-16

>gi|242007915|ref|XP_002424761.1| Uracil phosphoribosyltransferase, putative [Pediculus humanus corporis] gi|212508275|gb|EEB12023.1| Uracil phosphoribosyltransferase, putative [Pediculus humanus corporis]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/50 (86%), Positives = 48/50 (96%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK ++VTPTGATY GLKY++GNCGVS+IRSGEAMEQ
Sbjct: 65  IRLVIEESLNQLPFSKCEVVTPTGATYQGLKYKKGNCGVSIIRSGEAMEQ 114

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865225|ref|XP_003708075.1| PREDICTED: uracil phosphoribosyltransferase homolog [Megachile rotundata]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 46/50 (92%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  + TPTGA Y+GLKY++GNCGVS+IRSGEAMEQ
Sbjct: 61  IRLVIEESLNQLPFSKCVVTTPTGAKYNGLKYQKGNCGVSIIRSGEAMEQ 110

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544105|ref|XP_001605649.1| PREDICTED: uracil phosphoribosyltransferase homolog [Nasonia vitripennis]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  I TPTGA Y GLKY++GNCGVS++RSGEAMEQ
Sbjct: 94  IRLVIEESLNQLPFSKCVITTPTGAKYKGLKYQKGNCGVSIVRSGEAMEQ 143

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711769|ref|XP_003394441.1| PREDICTED: uracil phosphoribosyltransferase homolog [Bombus terrestris]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 46/50 (92%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  + TPTGA Y+GLKY++GNCGVS++RSGEAMEQ
Sbjct: 61  IRLVIEESLNQLPFSKCVVTTPTGAKYNGLKYQKGNCGVSIVRSGEAMEQ 110

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402559|ref|XP_003486529.1| PREDICTED: LOW QUALITY PROTEIN: uracil phosphoribosyltransferase homolog [Bombus impatiens]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 46/50 (92%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  + TPTGA Y+GLKY++GNCGVS++RSGEAMEQ
Sbjct: 61  IRLVIEESLNQLPFSKCVVTTPTGAKYNGLKYQKGNCGVSIVRSGEAMEQ 110

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778802|ref|XP_624333.2| PREDICTED: uracil phosphoribosyltransferase homolog isoform 2 [Apis mellifera] gi|380030086|ref|XP_003698689.1| PREDICTED: uracil phosphoribosyltransferase homolog [Apis florea]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 46/50 (92%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  + TPTGA Y+GLKY++GNCGVS++RSGEAMEQ
Sbjct: 61  IRLVIEESLNQLPFSKCVVTTPTGAKYNGLKYQKGNCGVSIVRSGEAMEQ 110

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204329|gb|EFN83084.1| Uracil phosphoribosyltransferase [Harpegnathos saltator]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 45/50 (90%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPFSK  + TPTGA Y GLKY++GNCGVS++RSGEAMEQ
Sbjct: 61  IRLVIEESLNQLPFSKCVVTTPTGAQYKGLKYQKGNCGVSIVRSGEAMEQ 110

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025152|gb|EGI65332.1| Uracil phosphoribosyltransferase [Acromyrmex echinatior]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPF+K  + TPTGA Y GLKY++GNCGVS++RSGEAMEQ
Sbjct: 58  IRLVIEESLNQLPFTKCVVTTPTGAKYKGLKYQKGNCGVSIVRSGEAMEQ 107

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189892|gb|EFN74136.1| Uracil phosphoribosyltransferase [Camponotus floridanus]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPF+K  + TPTGA Y GLKY++GNCGVS++RSGEAMEQ
Sbjct: 58  IRLVIEESLNQLPFTKCVVTTPTGAKYKGLKYQKGNCGVSIVRSGEAMEQ 107

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785833|gb|EFZ12452.1| hypothetical protein SINV_06976 [Solenopsis invicta]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
           IRLVIEESLNQLPF+K  + TPTGA Y GLKY++GNCGVS++RSGEAMEQ
Sbjct: 73  IRLVIEESLNQLPFTKCVVTTPTGAKYKGLKYQKGNCGVSIVRSGEAMEQ 122

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
FB|FBgn0035639	261	CG5537 [Drosophila melanogaste	0.595	0.191	0.78	1.4e-16
UNIPROTKB|Q5ZIJ8	277	UPRT "Uracil phosphoribosyltra	0.904	0.274	0.518	2e-15
ZFIN|ZDB-GENE-040426-2411	257	uprt "uracil phosphoribosyltra	0.595	0.194	0.68	3.3e-15
UNIPROTKB|Q32LA4	306	UPRT "Uracil phosphoribosyltra	0.904	0.248	0.506	7.8e-15
UNIPROTKB|Q96BW1	309	UPRT "Uracil phosphoribosyltra	0.904	0.245	0.506	8.3e-15
RGD|1564806	309	Uprt "uracil phosphoribosyltra	0.904	0.245	0.506	8.3e-15
MGI|MGI:2685620	310	Uprt "uracil phosphoribosyltra	0.904	0.245	0.506	8.5e-15
UNIPROTKB|E9PSD7	173	UPRT "Uracil phosphoribosyltra	0.595	0.289	0.66	1.4e-14
WB|WBGene00008131	231	C47B2.2.2 [Caenorhabditis eleg	0.583	0.212	0.632	9.1e-13
TAIR|locus:2164516	486	UK/UPRT1 "AT5G40870" [Arabidop	0.630	0.109	0.547	4.8e-10

FB|FBgn0035639 CG5537 [Drosophila melanogaster (taxid:7227)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/50 (78%), Positives = 43/50 (86%)

Query:    27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
             IRLVIEESLNQLP++  D+ TPTGA Y GLKY  GNCGVS+IRSGEAMEQ
Sbjct:    96 IRLVIEESLNQLPYTHCDVETPTGAIYEGLKYRSGNCGVSIIRSGEAMEQ 145

GO:0004845 "uracil phosphoribosyltransferase activity" evidence=ISS

UNIPROTKB|Q5ZIJ8 UPRT "Uracil phosphoribosyltransferase homolog" [Gallus gallus (taxid:9031)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 41/79 (51%), Positives = 53/79 (67%)

Query:     1 MNVKVVRLQPFPEKPVA--GD-VLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
             MN ++  LQ       A  GD V      IRLV+EE LNQLP+++  + TPTG  Y G+K
Sbjct:    83 MNDQIRELQTIIRDKTASRGDFVFSADRLIRLVVEERLNQLPYTECTVTTPTGYKYEGVK 142

Query:    58 YERGNCGVSVIRSGEAMEQ 76
             +E+GNCGVS++RSGEAMEQ
Sbjct:   143 FEKGNCGVSIMRSGEAMEQ 161

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-040426-2411 uprt "uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:    27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
             IRLV+EE LNQLP+S+  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct:    92 IRLVVEEGLNQLPYSECTVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQ 141

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q32LA4 UPRT "Uracil phosphoribosyltransferase homolog" [Bos taurus (taxid:9913)]

 Score = 190 (71.9 bits), Expect = 7.8e-15, P = 7.8e-15
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query:     1 MNVKVVRLQPFPEKPVA--GDVLDLLET-IRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
             MN ++  LQ       A  GD +   +  IRLV+EE LNQLP+ +  + TPTG  Y G+K
Sbjct:   112 MNDQIRELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYEECMVTTPTGFKYEGVK 171

Query:    58 YERGNCGVSVIRSGEAMEQ 76
             +E+GNCGVS++RSGEAMEQ
Sbjct:   172 FEKGNCGVSIMRSGEAMEQ 190

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q96BW1 UPRT "Uracil phosphoribosyltransferase homolog" [Homo sapiens (taxid:9606)]

 Score = 190 (71.9 bits), Expect = 8.3e-15, P = 8.3e-15
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query:     1 MNVKVVRLQPFPEKPVA--GDVLDLLET-IRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
             MN ++  LQ       A  GD +   +  IRLV+EE LNQLP+ +  + TPTG  Y G+K
Sbjct:   115 MNDQIRELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVK 174

Query:    58 YERGNCGVSVIRSGEAMEQ 76
             +E+GNCGVS++RSGEAMEQ
Sbjct:   175 FEKGNCGVSIMRSGEAMEQ 193

GO:0006222 "UMP biosynthetic process" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

RGD|1564806 Uprt "uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 8.3e-15, P = 8.3e-15
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query:     1 MNVKVVRLQPFPEKPVA--GDVLDLLET-IRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
             MN ++  LQ       A  GD +   +  IRLV+EE LNQLP+ +  + TPTG  Y G+K
Sbjct:   115 MNDQIRELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGHKYEGVK 174

Query:    58 YERGNCGVSVIRSGEAMEQ 76
             +E+GNCGVS++RSGEAMEQ
Sbjct:   175 FEKGNCGVSIMRSGEAMEQ 193

GO:0003674 "molecular_function" evidence=ND

GO:0006222 "UMP biosynthetic process" evidence=IDA

GO:0007565 "female pregnancy" evidence=IEP

GO:0007595 "lactation" evidence=IEP

GO:0032868 "response to insulin stimulus" evidence=IEP

MGI|MGI:2685620 Uprt "uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 190 (71.9 bits), Expect = 8.5e-15, P = 8.5e-15
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query:     1 MNVKVVRLQPFPEKPVA--GDVLDLLET-IRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
             MN ++  LQ       A  GD +   +  IRLV+EE LNQLP+ +  + TPTG  Y G+K
Sbjct:   116 MNDQIRELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGHKYEGVK 175

Query:    58 YERGNCGVSVIRSGEAMEQ 76
             +E+GNCGVS++RSGEAMEQ
Sbjct:   176 FEKGNCGVSIMRSGEAMEQ 194

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006222 "UMP biosynthetic process" evidence=ISO

UNIPROTKB|E9PSD7 UPRT "Uracil phosphoribosyltransferase homolog" [Homo sapiens (taxid:9606)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query:    27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
             IRLV+EE LNQLP+ +  + TPTG  Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct:     8 IRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 57

GO:0006222 "UMP biosynthetic process" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

WB|WBGene00008131 C47B2.2.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query:    27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAME 75
             +RLVIEE LN LPF++  + TPTG  Y G+++ RGNCGVS+ RSGEAME
Sbjct:    71 MRLVIEECLNHLPFTEHTVTTPTGFKYEGIQFNRGNCGVSLCRSGEAME 119

GO:0005737 "cytoplasm" evidence=IDA

GO:0055120 "striated muscle dense body" evidence=IDA

TAIR|locus:2164516 UK/UPRT1 "AT5G40870" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 4.8e-10, P = 4.8e-10
 Identities = 29/53 (54%), Positives = 38/53 (71%)

Query:    27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
             IRLV+E  L  LPF++  +VTPTGA Y G+ + +  CGVS+IRSGE+ME   R
Sbjct:   309 IRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVSIIRSGESMENALR 361

GO:0004845 "uracil phosphoribosyltransferase activity" evidence=IGI;ISS;IDA

GO:0005524 "ATP binding" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0004849 "uridine kinase activity" evidence=IGI;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

GO:0044206 "UMP salvage" evidence=IDA

GO:2000904 "regulation of starch metabolic process" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NYU7	UPP_DANRE	No assigned EC number	0.68	0.5952	0.1945	yes	N/A
B1AVZ0	UPP_MOUSE	No assigned EC number	0.66	0.5952	0.1612	yes	N/A
Q5ZIJ8	UPP_CHICK	No assigned EC number	0.5189	0.9047	0.2743	yes	N/A
Q9FKS0	UKL1_ARATH	2, ., 4, ., 2, ., 9	0.5370	0.6428	0.1111	yes	N/A
Q96BW1	UPP_HUMAN	No assigned EC number	0.66	0.5952	0.1618	yes	N/A
Q32LA4	UPP_BOVIN	No assigned EC number	0.6415	0.6309	0.1732	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	84
COG0035	210	COG0035, Upp, Uracil phosphoribosyltransferase [Nu	0.001

>gnl|CDD|223113 COG0035, Upp, Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 35.2 bits (82), Expect = 0.001
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E  RL+  E+   LP  K++I TP G T       +    V ++R+G  M +
Sbjct: 35 EIGRLLAYEATRDLPLEKVEIETPLGPTEGVQIAGKKIVIVPILRAGLGMVE 86

Length = 210

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
KOG1017|consensus	267		99.91
COG0035	210	Upp Uracil phosphoribosyltransferase [Nucleotide t	99.91
PLN02541	244	uracil phosphoribosyltransferase	99.9
PF14681	207	UPRTase: Uracil phosphoribosyltransferase; PDB: 1V	99.89
TIGR01091	207	upp uracil phosphoribosyltransferase. that include	99.88
PRK00129	209	upp uracil phosphoribosyltransferase; Reviewed	99.87
KOG4203|consensus	473		99.36

>KOG1017|consensus

Probab=99.91  E-value=2.3e-25  Score=159.14  Aligned_cols=83  Identities=47%  Similarity=0.672  Sum_probs=81.1

Q ss_pred             CCceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHH
Q psy4430           1 MNVKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQV   77 (84)
Q Consensus         1 ~~~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~   77 (84)
                      ||+|+..+.|   ||+|+++||.|+.|||.||.+||.|++|||.+++|+||.|.+|+|.++.+.-|+|+|.|||++|++|
T Consensus        73 ~n~q~~el~ti~Rdkst~rsDF~F~ADRLiRLViEE~LNqLPytec~VtTPTG~kYEGikf~~GNCGVSi~RSGEAMEqg  152 (267)
T KOG1017|consen   73 CNSQVAELLTILRDKSTNRSDFVFNADRLIRLVIEECLNQLPYTECTVTTPTGFKYEGIKFNRGNCGVSICRSGEAMEQG  152 (267)
T ss_pred             hHHHHHHHHHHHhhccCcccceeecHHHHHHHHHHHHhhcCCccceeeecCCcceeeceeecCCCcceEEEechHHHHHH
Confidence            6899999998   9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhcccc
Q psy4430          78 QRGPRY   83 (84)
Q Consensus        78 ~~~~~~   83 (84)
                      ++++||
T Consensus       153 LRdCCR  158 (267)
T KOG1017|consen  153 LRDCCR  158 (267)
T ss_pred             HHHHHH
Confidence            999997

>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.91  E-value=2e-24  Score=153.62  Aligned_cols=72  Identities=24%  Similarity=0.181  Sum_probs=68.4

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHhcccc
Q psy4430          11 FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQRGPRY   83 (84)
Q Consensus        11 d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~~~~~   83 (84)
                      |++|++++||++++||++||+|||+++||+++++|+||++ +++|.++. +++|+|||||||++|++|++++|-
T Consensus        21 dk~t~~~~Fr~~~~ei~~lL~yEa~~~l~~e~~~ieTP~~-~~~~~~~~~~~i~~V~ILRAGl~m~~gl~~~~P   93 (210)
T COG0035          21 DKNTGTKEFRELLDEIGRLLAYEATRDLPLEKVEIETPLG-PTEGVQIAGKKIVIVPILRAGLGMVEGLLKLIP   93 (210)
T ss_pred             hcCCChHHHHHHHHHHHHHHHHHHhCcCceeEEEEECCCc-ceeeeeecCCcEEEEEEeeccccHHHHHHHhCC
Confidence            9999999999999999999999999999999999999999 58999996 559999999999999999999874

>PLN02541 uracil phosphoribosyltransferase

Probab=99.90  E-value=5.4e-24  Score=154.25  Aligned_cols=81  Identities=17%  Similarity=0.099  Sum_probs=70.4

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCC-CCCeeeEEeCCCCceeeeeeec--CCeeEEeecccChhhHH
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQ-LPFSKMDIVTPTGATYHGLKYE--RGNCGVSVIRSGEAMEQ   76 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~-lp~~~~~V~TP~g~~~~g~~~~--~~i~~VpILRAGl~m~~   76 (84)
                      .+++.++|   |++|++.+||+|++||++||+|||+++ ||+++++|+||+|. +.+..+.  +++|+|||||||++|++
T Consensus        40 p~i~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~Ea~~~~lp~~~~~V~TP~g~-~~~~~~~~~~~i~~V~ILRAGl~m~~  118 (244)
T PLN02541         40 PLIKHWLSVLRNEQTPPPIFRSAMAELGRLLIYEASRDWLPTMTGEVQTPMGV-ADVEFIDPREPVAVVPILRAGLVLLE  118 (244)
T ss_pred             hHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhccCCccceEEECCCCe-EEEEeecCCCcEEEEeEeCCcHhHHH
Confidence            34555666   999999999999999999999999988 99999999999996 4555554  45999999999999999


Q ss_pred             HHhccccC
Q psy4430          77 VQRGPRYD   84 (84)
Q Consensus        77 ~~~~~~~~   84 (84)
                      |+++++.+
T Consensus       119 g~~~~~P~  126 (244)
T PLN02541        119 HASSVLPA  126 (244)
T ss_pred             HHHhhCCC
Confidence            99998753

>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C

Probab=99.89  E-value=2.2e-23  Score=146.98  Aligned_cols=81  Identities=27%  Similarity=0.307  Sum_probs=70.1

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCC-CCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHH
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQ-LPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQ   78 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~-lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~   78 (84)
                      +++.+++   |++|++.+||+|++||+++|+|||+++ +|+++.+|+||+|..+.|.... +++|+|||||||++|++|+
T Consensus         6 ~~~~~lt~LRd~~t~~~~Fr~~~~rl~~lL~~eal~~~l~~~~~~v~Tp~g~~~~g~~~~~~~i~~V~IlRaG~~m~~~~   85 (207)
T PF14681_consen    6 LLRHLLTILRDRNTSRAEFRRYLDRLGRLLAEEALADWLPYEEVEVETPLGHKYGGVILNEDKICIVPILRAGLPMLEGF   85 (207)
T ss_dssp             HHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHTTT-S-EEEEEEEESSSEEEEEEECSSGCEEEEEETTTHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHhccccceeEEEEcCCCcEEEEEEeecccEEEEEEeCCcHHHHHHH
Confidence            3444445   999999999999999999999999998 9999999999999988886655 4999999999999999999


Q ss_pred             hccccC
Q psy4430          79 RGPRYD   84 (84)
Q Consensus        79 ~~~~~~   84 (84)
                      ++++.+
T Consensus        86 ~~~~p~   91 (207)
T PF14681_consen   86 REVFPD   91 (207)
T ss_dssp             HHHSTT
T ss_pred             HHhCCC
Confidence            998753

...

>TIGR01091 upp uracil phosphoribosyltransferase

Probab=99.88  E-value=1.3e-22  Score=143.02  Aligned_cols=80  Identities=18%  Similarity=0.068  Sum_probs=71.8

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHH
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQ   78 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~   78 (84)
                      .+++.++|   |++|++.+||+|++||+++|+|||++++|+++.+|+||+|. +.|..+. +++|+|||||||.+|++++
T Consensus         8 p~~~~~lt~lRd~~t~~~~Fr~~~~rl~~~l~~ea~~~l~~~~~~v~tp~g~-~~~~~~~~~~i~~V~ILrgg~~~~~~l   86 (207)
T TIGR01091         8 PLIKHKLTLLRDKNTDTKEFRELLRELGRLLAYEATRDLELEEVEVETPLGE-TEGGRILGKKIVLVPILRAGLGMVDGV   86 (207)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHhccCCceeEEEECCCCc-EEEeEecCCcEEEEEEeCCcHHHHHHH
Confidence            45556666   99999999999999999999999999999999999999997 4666665 6799999999999999999


Q ss_pred             hcccc
Q psy4430          79 RGPRY   83 (84)
Q Consensus        79 ~~~~~   83 (84)
                      ++++.
T Consensus        87 ~~~l~   91 (207)
T TIGR01091        87 LKLIP   91 (207)
T ss_pred             HHhCC
Confidence            98874

that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.

>PRK00129 upp uracil phosphoribosyltransferase; Reviewed

Probab=99.87  E-value=3.8e-22  Score=140.73  Aligned_cols=79  Identities=20%  Similarity=0.134  Sum_probs=72.2

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHh
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      +++.++|   |++|++.+||+|++||+++|+|||+++||+++.+|+||+| .++|..+. +++|+|||+|||++|.++++
T Consensus        11 ~~~~~lt~lRd~~t~~~~fr~~~~rl~~~l~~eal~~l~~~~~~v~tp~g-~~~g~~~~~~~~vvV~IlrgG~~~~~~l~   89 (209)
T PRK00129         11 LIQHKLTLLRDKNTSTKRFRELLEELGRLLAYEATRDLPLEEVEIETPLG-KTTGKRIAGKKLVIVPILRAGLGMVDGVL   89 (209)
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHhcccceeEEEEECCCC-cEEEEEecCCeEEEEEEeCCCHHHHHHHH
Confidence            4455555   9999999999999999999999999999999999999999 58999886 68999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +.+.
T Consensus        90 ~~l~   93 (209)
T PRK00129         90 KLIP   93 (209)
T ss_pred             HhCC
Confidence            8764

>KOG4203|consensus

Probab=99.36  E-value=6.8e-13  Score=103.68  Aligned_cols=81  Identities=31%  Similarity=0.454  Sum_probs=76.8

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHHHh
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~~~   79 (84)
                      .++++++|   |+.|++.+|.+|++++++++.++++..+|+.+..+.||.|..+.|.....++|+|+|+|||..|+.+++
T Consensus       273 ~~i~~~~t~~~~~~Ts~~~~~~~~~~~vrl~l~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~i~gv~i~r~g~~~~~alr  352 (473)
T KOG4203|consen  273 NQIKGKLTLLRDHTTSRHPFSFYSDHLVRLVLEHGLGHLPYTEKRIVTPRGLAYSGVNFCKQICGVSIPRSGESMETALR  352 (473)
T ss_pred             cccCCceeEeecCCcCCCCHHHHHHHHHHHHhhcccCcccceeeeEecccccchhcccccchhccCCCCcchhHHHHHHH
Confidence            47788888   999999999999999999999999999999999999999998999988899999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      .+|+
T Consensus       353 ~~~~  356 (473)
T KOG4203|consen  353 AACK  356 (473)
T ss_pred             HHcC
Confidence            9986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	84
1upu_D	224	Structure Of The Uracil Phosphoribosyltransferase,		8e-12
1bd3_D	243	Structure Of The Apo Uracil Phosphoribosyltransfera		8e-12

>pdb|1UPU|D Chain D, Structure Of The Uracil Phosphoribosyltransferase, Mutant C128v, Bound To Product Uridine-1-Monophosphate (Ump) Length = 224

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ----VQRGPR 82
           IRL+IEE+LN+LPF K ++ TP   +YHG+ +    CGVS++R+GE+ME     V RG R
Sbjct: 50  IRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVR 109

>pdb|1BD3|D Chain D, Structure Of The Apo Uracil Phosphoribosyltransferase, 2 Mutant C128v Length = 243

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 27  IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ----VQRGPR 82
           IRL+IEE+LN+LPF K ++ TP   +YHG+ +    CGVS++R+GE+ME     V RG R
Sbjct: 69  IRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVR 128

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
1bd3_D	243	Uprtase, uracil phosphoribosyltransferase; glycosy	2e-13
1i5e_A	209	Uracil phosphoribosyltransferase; salvage pathway;	6e-10
1o5o_A	221	Uracil phosphoribosyltransferase; TM0721, structur	1e-09
3dmp_A	217	Uracil phosphoribosyltransferase; structural genom	3e-09
2e55_A	208	Uracil phosphoribosyltransferase; structural genom	6e-09
1v9s_A	208	Uracil phosphoribosyltransferase; pyrimidine salva	1e-08
2ehj_A	208	Uracil phosphoribosyltransferase; structural genom	1e-06
1xtt_A	216	Probable uracil phosphoribosyltransferase; tetrame	1e-05

>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Length = 243

 Score = 61.5 bits (149), Expect = 2e-13
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query: 25  ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
             IRL+IEE+LN+LPF K ++ TP   +YHG+ +    CGVS++R+GE+ME 
Sbjct: 67  RLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMES 118

>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Length = 209

 Score = 51.8 bits (124), Expect = 6e-10
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E    LP  +++I TP       +   +    + ++R+G  M  
Sbjct: 35 EVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPILRAGIGMVD 86

>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Length = 221

 Score = 51.5 bits (123), Expect = 1e-09
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E+   L   ++++ TP   T      ++    V ++R+G  M  
Sbjct: 47 EITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIVVVPILRAGLVMAD 98

>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} Length = 217

 Score = 49.9 bits (119), Expect = 3e-09
 Identities = 12/52 (23%), Positives = 19/52 (36%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E    LP +   + TP       +   +    V V+R+G  M  
Sbjct: 42 EITLLMGYEITRNLPITTKRVETPLVEIDAPVIAGKKLAIVPVLRAGVGMSD 93

>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Length = 208

 Score = 49.1 bits (117), Expect = 6e-09
 Identities = 9/52 (17%), Positives = 22/52 (42%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   +++ E+L  +   + ++ T  G        E     V ++R+G +  +
Sbjct: 33 ELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIVFVPILRAGLSFLE 84

>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208

 Score = 48.3 bits (115), Expect = 1e-08
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E++  L   +  + TP       +   +    V+++R+G  M +
Sbjct: 34 EVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLALVAILRAGLVMVE 85

>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Length = 208

 Score = 42.6 bits (100), Expect = 1e-06
 Identities = 11/52 (21%), Positives = 18/52 (34%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E+   L   K+ I    G         +    V ++R+G  M  
Sbjct: 34 EVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMD 85

>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Length = 216

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGN--CGVSVIRSGEAMEQ 76
             R++  E  N L +  +++ TP G    G+     N    ++++R+   + +
Sbjct: 34 RLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVE 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
3dmp_A	217	Uracil phosphoribosyltransferase; structural genom	99.9
1bd3_D	243	Uprtase, uracil phosphoribosyltransferase; glycosy	99.9
1xtt_A	216	Probable uracil phosphoribosyltransferase; tetrame	99.9
1v9s_A	208	Uracil phosphoribosyltransferase; pyrimidine salva	99.89
2ehj_A	208	Uracil phosphoribosyltransferase; structural genom	99.89
2e55_A	208	Uracil phosphoribosyltransferase; structural genom	99.88
1o5o_A	221	Uracil phosphoribosyltransferase; TM0721, structur	99.88
1i5e_A	209	Uracil phosphoribosyltransferase; salvage pathway;	99.85

>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1

Probab=99.90  E-value=2.9e-24  Score=152.16  Aligned_cols=79  Identities=16%  Similarity=0.008  Sum_probs=72.7

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHh
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      +++.++|   |++|++.+||+|++||+++|+|||+++||+++++|+||+| .++|.++. +++|+|||||||++|+++++
T Consensus        18 ~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~lp~~~~~V~TP~g-~~~g~~~~~~~i~~V~IlRaG~~m~~~l~   96 (217)
T 3dmp_A           18 LIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLV-EIDAPVIAGKKLAIVPVLRAGVGMSDGLL   96 (217)
T ss_dssp             HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSC-EEEEEEECGGGEEEEEEETTTHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCe-EEEEEEecCCcEEEEEecccchHHHHHHH
Confidence            3444555   9999999999999999999999999999999999999999 58999996 89999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +++.
T Consensus        97 ~~ip  100 (217)
T 3dmp_A           97 ELIP  100 (217)
T ss_dssp             HHCT
T ss_pred             HhCc
Confidence            9875

>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*

Probab=99.90  E-value=8e-24  Score=152.06  Aligned_cols=80  Identities=38%  Similarity=0.591  Sum_probs=74.1

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHHHhc
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG   80 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~~~~   80 (84)
                      +++.++|   |++|++.+||+|++||++||+|||+++||+++++|+||+|..+.|..+.+++|+|||||||++|++++++
T Consensus        43 ~i~~~lt~lRd~~t~~~~Fr~~~~rl~~ll~yEa~~~lp~~~~~v~TP~g~~~~g~~~~~~l~~V~ILRaG~~m~~~l~~  122 (243)
T 1bd3_D           43 QLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRA  122 (243)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEECTTSCEEEEEEECCCEEEEEEETTTHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCcceEeeeeccCcEEEEEEEcchHHHHHHHHH
Confidence            4455555   9999999999999999999999999999999999999999888999888999999999999999999999


Q ss_pred             ccc
Q psy4430          81 PRY   83 (84)
Q Consensus        81 ~~~   83 (84)
                      ++.
T Consensus       123 ~ip  125 (243)
T 1bd3_D          123 VCR  125 (243)
T ss_dssp             HST
T ss_pred             hCC
Confidence            874

>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*

Probab=99.90  E-value=8.2e-24  Score=149.70  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=70.7

Q ss_pred             eeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeee-c-CCeeEEeecccChhhHHHHh
Q psy4430           5 VVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKY-E-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         5 ~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~-~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      ++.++|   |++|++.+||+|++||++||+|||+++||+++++|+||+|..+.|..+ . +++|+|||||||++|+++++
T Consensus        11 ~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~l~~~~~~v~TP~g~~~~~~~~~~~~~i~iV~IlRaG~~m~~gl~   90 (216)
T 1xtt_A           11 TLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLL   90 (216)
T ss_dssp             HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECTTSCEEEEEECGGGGSEEEEEEETTTHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCceeEEEECCCccEecceEecCCCcEEEEeecCCcHHHHHHHH
Confidence            344444   999999999999999999999999999999999999999987666545 4 79999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +++.
T Consensus        91 ~~lp   94 (216)
T 1xtt_A           91 KAFP   94 (216)
T ss_dssp             HHCT
T ss_pred             HHcc
Confidence            9875

>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.89  E-value=1.3e-23  Score=147.89  Aligned_cols=79  Identities=14%  Similarity=-0.017  Sum_probs=72.8

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHh
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      +++.++|   |++|++.+||+|++||++||+|||+++||+++++|+||+| .++|..++ +++|+|||||||.+|+++++
T Consensus        10 ~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g-~~~g~~~~g~~l~~V~ILraG~~~~~~l~   88 (208)
T 1v9s_A           10 LVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIA-PARVKVLSGKKLALVAILRAGLVMVEGIL   88 (208)
T ss_dssp             HHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSS-EEEEEEECSSCCEEEEETTTHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHccCCCeEEEEECCCc-eEEEEEecCCceEEEEeccchHHHHHHHH
Confidence            4455555   9999999999999999999999999999999999999999 58999997 89999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +++.
T Consensus        89 ~~ip   92 (208)
T 1v9s_A           89 KLVP   92 (208)
T ss_dssp             TTCT
T ss_pred             HhCC
Confidence            9874

>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}

Probab=99.89  E-value=1.4e-23  Score=147.66  Aligned_cols=79  Identities=15%  Similarity=-0.058  Sum_probs=72.8

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHh
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      +++.++|   |++|++.+||+|++||++||+|||+++||+++.+|+||+| .++|..++ +++|+|||||||++|+++++
T Consensus        10 ~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~-~~~g~~~~g~~l~~V~ILraG~~~~~~l~   88 (208)
T 2ehj_A           10 LVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNG-PVEIDQIKGKKITVVPILRAGLGMMDGVL   88 (208)
T ss_dssp             HHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEETTE-EEEEEEECSSCCEEEEBTTGGGGGHHHHH
T ss_pred             HHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-cEEEEEecCCceEEEEeecCHHHHHHHHH
Confidence            4555555   9999999999999999999999999999999999999999 58999997 89999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +++.
T Consensus        89 ~~ip   92 (208)
T 2ehj_A           89 ENVP   92 (208)
T ss_dssp             HHCT
T ss_pred             HhCC
Confidence            9874

>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}

Probab=99.88  E-value=3.3e-23  Score=145.83  Aligned_cols=80  Identities=11%  Similarity=-0.003  Sum_probs=73.2

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHH
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQ   78 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~   78 (84)
                      .+++.++|   |++|++.+||+|++||++||+|||+++||+++.+|+||+| .+.|..++ +++|+|||||||++|++++
T Consensus         8 p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~-~~~~~~~~g~~~~~V~ILraG~~~~~~l   86 (208)
T 2e55_A            8 PLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIG-NKRFNYLNEEEIVFVPILRAGLSFLEGA   86 (208)
T ss_dssp             HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEETTE-EEEEEECCGGGEEEEEEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCceeEEeCCCC-ceEeeeecCCcEEEEEEecchHHHHHHH
Confidence            34555666   9999999999999999999999999999999999999999 47899887 8999999999999999999


Q ss_pred             hcccc
Q psy4430          79 RGPRY   83 (84)
Q Consensus        79 ~~~~~   83 (84)
                      ++.+.
T Consensus        87 ~~~lp   91 (208)
T 2e55_A           87 LQVVP   91 (208)
T ss_dssp             HHHST
T ss_pred             HHhCC
Confidence            98774

>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1

Probab=99.88  E-value=4.7e-23  Score=146.28  Aligned_cols=80  Identities=15%  Similarity=0.047  Sum_probs=73.1

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHH
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQ   78 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~   78 (84)
                      .+++.++|   |++|++.+||+|++||++||+|||+++||+++++|+||+| .++|..++ +++|+|||||||.+|++++
T Consensus        22 p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g-~~~g~~~~g~~lviV~IlrgG~~~~~~l  100 (221)
T 1o5o_A           22 PLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPIT-KTIGYRINDKDIVVVPILRAGLVMADGI  100 (221)
T ss_dssp             HHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSSC-EEEEEECCSTTEEEEEEETTHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-eEEEEEecCCeEEEEEEecchHHHHHHH
Confidence            34555555   9999999999999999999999999999999999999999 58999987 8999999999999999999


Q ss_pred             hcccc
Q psy4430          79 RGPRY   83 (84)
Q Consensus        79 ~~~~~   83 (84)
                      .+.+.
T Consensus       101 ~~~lp  105 (221)
T 1o5o_A          101 LELLP  105 (221)
T ss_dssp             HHHST
T ss_pred             HHhCC
Confidence            99873

>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1

Probab=99.85  E-value=1.2e-21  Score=137.20  Aligned_cols=79  Identities=14%  Similarity=0.024  Sum_probs=71.9

Q ss_pred             eeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHh
Q psy4430           4 KVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         4 ~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~   79 (84)
                      +++.++|   |++|++.+||+|++||++||+|||+++||+++.+|+||++. +.|.+++ +++|+|||||||++|.+++.
T Consensus        11 ~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~-~~~~~~~~~~~~vV~Ilr~G~~~~~~L~   89 (209)
T 1i5e_A           11 LIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSK-ARAKVIAGKKLGVIPILRAGIGMVDGIL   89 (209)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCE-EEEEEECCCCEEEEEBTTGGGGGHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCce-eeeeEecCCceEEEEEecCChHHHHHHH
Confidence            4455555   99999999999999999999999999999999999999995 7899887 89999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +.+.
T Consensus        90 ~~l~   93 (209)
T 1i5e_A           90 KLIP   93 (209)
T ss_dssp             HHCT
T ss_pred             HhCC
Confidence            8763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1o5oa_	210	c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga marit	7e-08
d1i5ea_	208	c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldoly	1e-06
d1bd3a_	224	c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondi	9e-06
d1v9sa1	208	c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus the	1e-05
d1xtta1	215	c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus	1e-04

>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Length = 210

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.4 bits (107), Expect = 7e-08
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E+   L   ++++ TP   T      ++    V ++R+G  M  
Sbjct: 36 EITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIVVVPILRAGLVMAD 87

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E    LP  +++I TP       +   +    + ++R+G  M  
Sbjct: 34 EVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPILRAGIGMVD 85

>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Length = 224

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

 Score = 39.6 bits (92), Expect = 9e-06
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
            IRL+IEE+LN+LPF K ++ TP   +YHG+ +    CGVS++R+GE+ME 
Sbjct: 48 RLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMES 99

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
          E   L+  E++  L   +  + TP       +   +    V+++R+G  M +
Sbjct: 34 EVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLALVAILRAGLVMVE 85

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Length = 215

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 36.1 bits (83), Expect = 1e-04
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 25 ETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGN--CGVSVIRSGEAMEQ 76
             R++  E  N L +  +++ TP G    G+     N    ++++R+   + +
Sbjct: 33 RLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVE 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d1bd3a_	224	Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811	99.93
d1v9sa1	208	Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2	99.92
d1i5ea_	208	Uracil PRTase, Upp {Bacillus caldolyticus [TaxId:	99.91
d1xtta1	215	Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId	99.91
d1o5oa_	210	Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23	99.9

>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.93  E-value=6.5e-27  Score=164.75  Aligned_cols=81  Identities=37%  Similarity=0.584  Sum_probs=75.3

Q ss_pred             ceeeeccc---CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHHHh
Q psy4430           3 VKVVRLQP---FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR   79 (84)
Q Consensus         3 ~~~~~~~~---d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~~~   79 (84)
                      .||+.++|   |++|++.+||+|++||++||+|||+++||+++++|+||+|..+.|..+.+++|+|||||||++|++|++
T Consensus        23 p~i~~~lTiLRd~~T~~~~Fr~~~~ri~~lL~yEa~~~l~~~~~~V~TPlg~~~~~~~~~~~v~~V~ILRAGl~m~~g~~  102 (224)
T d1bd3a_          23 AQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLR  102 (224)
T ss_dssp             HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCBCCEEEECTTSCEEEECCBCCCEEEEEEETGGGGGHHHHH
T ss_pred             HHHHHHHHHhHCCCCChHHHHHHHHHHHHHHHHHHHhccCceEEEEECCCcccccceecCCceEEEeeecccchhhhhHH
Confidence            45666667   999999999999999999999999999999999999999987888888899999999999999999999


Q ss_pred             cccc
Q psy4430          80 GPRY   83 (84)
Q Consensus        80 ~~~~   83 (84)
                      +++.
T Consensus       103 ~~~p  106 (224)
T d1bd3a_         103 AVCR  106 (224)
T ss_dssp             HHST
T ss_pred             hhCC
Confidence            9875

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=3.7e-25  Score=154.04  Aligned_cols=74  Identities=14%  Similarity=0.003  Sum_probs=67.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHHHhccccC
Q psy4430          11 FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPRYD   84 (84)
Q Consensus        11 d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~~~~~~~~   84 (84)
                      |++|++.+||+|++||+++|+|||++++|+++.+|+||+|..+.+....+++|+|||||||++|++|+++++.+
T Consensus        20 d~~T~~~~Fr~~~~rl~~lL~yea~~~l~~~~~~V~TP~~~~~~~~~~~~~i~~V~ILRAGl~m~~g~~~~~p~   93 (208)
T d1v9sa1          20 DKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLALVAILRAGLVMVEGILKLVPH   93 (208)
T ss_dssp             STTCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSSEEEEEEECSSCCEEEEETTTHHHHHHHHHTTCTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhCCCccEEEECCCCceeEEEecCCceEEeeeeccchhHHHHHHHHCCC
Confidence            99999999999999999999999999999999999999997544444358899999999999999999998864

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

Probab=99.91  E-value=4.9e-25  Score=153.57  Aligned_cols=74  Identities=15%  Similarity=0.036  Sum_probs=67.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeecCCeeEEeecccChhhHHHHhccccC
Q psy4430          11 FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRGPRYD   84 (84)
Q Consensus        11 d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~~~i~~VpILRAGl~m~~~~~~~~~~   84 (84)
                      |++|++.+||+|++||++||+|||++++|+++++|+||+|..+.+....+++|+|||||||++|++|+++++.+
T Consensus        20 d~~T~~~~Fr~~~~rl~~lL~yea~~~l~~~~~~VeTPlg~~~~~~~~~~~i~~V~ILRAGl~m~~g~~~~~p~   93 (208)
T d1i5ea_          20 DKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPILRAGIGMVDGILKLIPA   93 (208)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCEEEEEEECCCCEEEEEBTTGGGGGHHHHHHHCTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhccceeEEEecCCcceEeeeecCCceeEeecccchhhHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999997554444458899999999999999999998753

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=99.91  E-value=9.4e-25  Score=152.59  Aligned_cols=73  Identities=14%  Similarity=0.094  Sum_probs=70.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec--CCeeEEeecccChhhHHHHhcccc
Q psy4430          11 FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE--RGNCGVSVIRSGEAMEQVQRGPRY   83 (84)
Q Consensus        11 d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~--~~i~~VpILRAGl~m~~~~~~~~~   83 (84)
                      |++|++.+||+|++||++||+|||+++||+++++|+||+|..++|.++.  +++|+|||||||++|++|+++++.
T Consensus        19 d~~T~~~~Fr~~~~~i~~lL~~Ea~~~l~~~~~~v~TP~g~~~~g~~~~~~~~i~~V~ILRAGl~m~~g~~~~~p   93 (215)
T d1xtta1          19 DKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFP   93 (215)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECTTSCEEEEEECGGGGSEEEEEEETTTHHHHHHHHHHCT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeEEEEcCCCccccceEecCCCceEEeechhhcccchHHHHhhCC
Confidence            9999999999999999999999999999999999999999889999885  689999999999999999999874

>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=2.5e-24  Score=149.99  Aligned_cols=73  Identities=16%  Similarity=0.084  Sum_probs=67.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhCCCCCeeeEEeCCCCceeeeeeec-CCeeEEeecccChhhHHHHhccccC
Q psy4430          11 FPEKPVAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQRGPRYD   84 (84)
Q Consensus        11 d~~T~~~~Fr~~~~rl~~lL~~eAl~~lp~~~~~V~TP~g~~~~g~~~~-~~i~~VpILRAGl~m~~~~~~~~~~   84 (84)
                      |++|++.+||+|++||+++|+|||++++|+++++|+||+|. +.|..+. +++|+|||||||++|++|+++++.+
T Consensus        22 d~~T~~~~Fr~~~~rl~~lL~~ea~~~l~~~~~~v~TP~g~-~~~~~~~~~~i~~V~ILRAGl~m~~g~~~~~p~   95 (210)
T d1o5oa_          22 DKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPITK-TIGYRINDKDIVVVPILRAGLVMADGILELLPN   95 (210)
T ss_dssp             STTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSSCE-EEEEECCSTTEEEEEEETTHHHHHHHHHHHSTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhCccccEEecCCCcc-eEEEEecCCceEEEEEeccchhHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999996 5676664 6799999999999999999998753