Psyllid ID: psy4431

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEcccEEEEcccccEEEEEEEEEEcEEEccccEEEEEEEEcccccEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEcEEEEEEEcEEEEEEEEEEEEEccccEEEEEEEccEEEEEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccHccccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEcEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEEEcccccEEEEEEEEcEEEEEEEEEEEEEEEEEEEccccEEEEEEEcEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccc
Coil and Loop (DISEMBL)
MDNFFCYVLFLVLTVQIYAAnlpsyikpckrnssdlnsCVIDIIKSlkprfhqglpelkipileplnlplvtldssgsqvVNFKANFrnmklhgaktldvkdvkldykgrklsmvlhlpkvymtsdydmngkvlvlpirgngkcsgnftdvEADVLFSGKFYEKNHKQfvkldatpkvsiklgnsemhfdnlfngneelgrstnnflndnwelvsaeviplvqDTVSTISYQLFKNVLDVysvdqllpen
Flexible Loop (DISEMBL)
MDNFFCYVLFLVLTVQIYAANLPSyikpckrnssDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANfrnmklhgaktldvkdvkldykgrklsmvlhlPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Low Complexity Region (SEG)
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGlpelkipileplnlplVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Disordered region (IsUnstruct)
***FFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQL****
Disordered Region (DISOPRED)
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPE*
Disordered Region (DISEMBL)
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Disordered Region (DISPRO)
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q9VBV3	249	Protein takeout OS=Drosop	no	N/A	0.896	0.899	0.319	8e-18
O76879	260	Circadian clock-controlle	no	N/A	0.848	0.815	0.296	1e-16
Q24764	260	Circadian clock-controlle	N/A	N/A	0.808	0.776	0.273	2e-13

>sp|Q9VBV3|TAKT_DROME Protein takeout OS=Drosophila melanogaster GN=to PE=2 SV=1

 Score = 90.9 bits (224), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 17/241 (7%)

Query: 5   FCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSL-KPRFHQGLPELKIPIL 63
           F  VL L+++V    A  P   KPCK    +   C++ +  +L      +G P L +  L
Sbjct: 6   FAVVLCLLVSVD---AKFPEDPKPCKYGDGE---CIMKLCNTLFSENSAEGDPGLNLMQL 59

Query: 64  EPLNLP-LVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVY 122
           +PL +  +V      S  V     F +  L+G K  D + VK+   GR L+    +  V 
Sbjct: 60  DPLKVDRMVISQGESSSPVGITLTFTDNLLYGIK--DQRIVKVKGFGRDLTAKHEVKIVT 117

Query: 123 MT----SDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATP-K 177
            T      Y++ GKVL+LPI G G+ +    +V A V FSGK   KN + +  LD T  K
Sbjct: 118 KTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLVKNGETY--LDVTDLK 175

Query: 178 VSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
           +++K  +S  HF NLFNG++ LG + N FLN+N E +  E    +  +   +   + K V
Sbjct: 176 ITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGV 235

Query: 238 L 238
            
Sbjct: 236 F 236

Participates in a novel circadian output pathway that conveys temporal and food status information to feeding-relevant metabolisms and activities. Involved in male courtship behavior. In the brain-associated fat body, transcription is enhanced by the dsx and fru male-specific isoforms and repressed by the dsx female-specific isoform.
Drosophila melanogaster (taxid: 7227)

>sp|O76879|CCCP_DROME Circadian clock-controlled protein OS=Drosophila melanogaster GN=anon-3B1.2 PE=2 SV=2

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 21/233 (9%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSG- 77
           +   PS +K CK       SC++   ++    F  G+PE ++  LEP+ L  + ++S G 
Sbjct: 26  SEGFPSPLKRCKLQD---ESCLLAQAQTFFQAFKNGIPERQVAALEPIALGTMFIESGGH 82

Query: 78  SQVVNFKANFRNMKLHG-AKTLDVKDVKLDYKGR----KLSMVLHLPKVYMTSDYDMNGK 132
           S+ + FK    + KL+  A ++ VK +K   K      KL+++L  P++ + + YD++GK
Sbjct: 83  SESIKFKLTMSDAKLYNLANSMMVKSLKGFTKDLTRPLKLTLLLDNPELEVRAKYDVDGK 142

Query: 133 VLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKN--HKQFVKLDATPKVSIKLGNSEMHFD 190
           +L+LPI   G  +    DV   V  + +  +++  H      D      IK G    HFD
Sbjct: 143 LLILPIVSKGDLTIRLNDVHTKVWITAEPVKRSDGHTYLNITDYKTATKIKGG----HFD 198

Query: 191 --NLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTV----STISYQLFKNV 237
             NLFN N+EL  ST   LN  W  ++ +V P + +      S I   L+ N+
Sbjct: 199 LSNLFNDNKELRDSTLKVLNQEWSTLALDVQPKINEACAKAFSAIVQSLWANI 251

Component of the circadian clock or downstream effector of clock function.

Drosophila melanogaster (taxid: 7227)

>sp|Q24764|CCCP_DROYA Circadian clock-controlled protein OS=Drosophila yakuba GN=anon-3B1.2 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSG- 77
           +   PS +K CK       SC++   ++    F +G+PE ++  LEP++L  + ++S G 
Sbjct: 26  SQGFPSPLKRCKLQE---ESCLVAQAQTFFQAFQKGIPERQVAALEPIDLGTMRIESGGH 82

Query: 78  SQVVNFKANFRNMKLHG-AKTLDVKDVKLDYKGRKLSMV----LHLPKVYMTSDYDMNGK 132
           S+ + FK    + KL+  A ++ VK +K   K     +     +  P++ + + YD++GK
Sbjct: 83  SESLKFKLVMSDAKLYNLANSVVVKSLKGFTKDLTKPLKLTLLMDTPELEVRAKYDVDGK 142

Query: 133 VLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKN--HKQFVKLDATPKVSIKLGNSEMHFD 190
           +L+LPI   G  +    +V+     + +  +++  H      D      IK G    HFD
Sbjct: 143 LLILPIVSKGDLTIRMNEVQTKRRITAEPVKRSDGHSYLNITDYKTITKIKGG----HFD 198

Query: 191 --NLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVS 227
             NLF+ N+EL  ST   LN  W  ++ +V P + +  S
Sbjct: 199 LSNLFDDNKELRESTLKVLNQEWNTLALDVQPKINEACS 237

Component of the circadian clock or downstream effector of clock function.

Drosophila yakuba (taxid: 7245)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
328712436	250	PREDICTED: protein takeout-like [Acyrtho	0.964	0.964	0.403	2e-49
189237515	254	PREDICTED: similar to GA10301-PA [Tribol	0.98	0.964	0.336	1e-39
156546390	255	PREDICTED: protein takeout-like [Nasonia	0.912	0.894	0.375	2e-39
225544219	225	CG10407-like protein [Ceratitis capitata	0.9	1.0	0.356	8e-39
242022223	261	protein takeout precursor, putative [Ped	0.9	0.862	0.343	3e-38
226693413	284	AT18312p [Drosophila melanogaster]	0.912	0.802	0.360	4e-38
24647334	259	CG10407, isoform A [Drosophila melanogas	0.912	0.880	0.360	4e-38
213515582	280	RH45484p [Drosophila melanogaster]	0.912	0.814	0.360	6e-38
195328557	230	GM25738 [Drosophila sechellia] gi|194119	0.908	0.986	0.358	1e-37
195452154	258	GK14019 [Drosophila willistoni] gi|19416	0.916	0.887	0.341	3e-37

>gi|328712436|ref|XP_001952524.2| PREDICTED: protein takeout-like [Acyrthosiphon pisum]

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 164/243 (67%), Gaps = 2/243 (0%)

Query: 7   YVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPL 66
           +VL + +  +I   +LPSYIKPCKR+  ++N C+++++++++P   +G+PE+ I  L+P+
Sbjct: 8   FVLCITVISEISGRSLPSYIKPCKRDDPNINECLMNLLENIRPYISKGIPEMHILPLDPV 67

Query: 67  NLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSD 126
            +P VTL    +  VNF A F ++K +GAK   ++ +K ++K + L + L+LP   + S 
Sbjct: 68  LVPSVTLKQDSAGSVNFVALFTDLKGYGAKNFQMQTIKANFKNQSLEIDLNLPFFRIESR 127

Query: 127 YDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFY-EKNHKQFVKLDATPKVSIKLGNS 185
           Y++NGK+L+LPI+GNGK  GN T+ EA + F      +KN+K F+++    K++++LG  
Sbjct: 128 YEVNGKILILPIKGNGKFVGNVTNAEAKIKFDLIIVKKKNNKNFIEIKPK-KITLELGAV 186

Query: 186 EMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQ 245
           ++HF NLFNGN++LG  TN F+NDNW+ +  E+ PL++DTV TI   + K V + +S+D 
Sbjct: 187 KLHFSNLFNGNKQLGDQTNRFINDNWKDLMKEIRPLLEDTVVTIVMGILKPVFETFSMDD 246

Query: 246 LLP 248
           L P
Sbjct: 247 LFP 249

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237515|ref|XP_972997.2| PREDICTED: similar to GA10301-PA [Tribolium castaneum]

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 151/247 (61%), Gaps = 2/247 (0%)

Query: 3   NFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPI 62
           N F    F V T       LPS+IK C+R+   L+ C+ + +++L+P   +G+PE  IP 
Sbjct: 10  NVFIIYNFAVFTTVRGKPKLPSFIKVCRRSDPHLSDCIKNSVENLRPLLARGIPEFDIPS 69

Query: 63  LEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVY 122
            EPL +P V +D  GS  V  ++ +R++K++G     +K VK+D +  ++ + L LP++ 
Sbjct: 70  CEPLCIPEVVIDQ-GSGAVAVRSTYRDIKVYGPSKFVLKYVKIDMERDRIRIKLWLPRLE 128

Query: 123 MTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKL 182
           +TS Y M G++L++PI G G   GN+++++A V+  G+   K+++ +  +     V   +
Sbjct: 129 LTSRYAMEGRILMMPISGTGTSRGNYSNIDATVIMQGQRVHKDNETYFNIKDF-YVDFNI 187

Query: 183 GNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYS 242
           G++ +  D+LFNG++ELG + N FLNDNW+ V+ E+ P+++DT+++I  +    +   Y 
Sbjct: 188 GHATIQLDDLFNGDKELGEAMNLFLNDNWKNVANEIKPVLEDTIASIFKKFSNKIYHKYP 247

Query: 243 VDQLLPE 249
           ++ LLP+
Sbjct: 248 LNLLLPK 254

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156546390|ref|XP_001607003.1| PREDICTED: protein takeout-like [Nasonia vitripennis]

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 138/232 (59%), Gaps = 4/232 (1%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
           +A +PS++K C+R+   LN C+   + SL+P    G+P L IP  EPL +P + L S  +
Sbjct: 25  SAEIPSFLKICRRSDPHLNECIKRSVDSLRPYLRTGIPALHIPPCEPLGVPEIEL-SQAA 83

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
             V+  + + N+K+ G     +K VKLD    ++ + L++P + M S+Y+M GK+L+LPI
Sbjct: 84  GPVSISSAYTNIKVWGGTDFILKSVKLDLDKDRIRLKLYIPHLEMLSNYNMEGKILMLPI 143

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYE--KNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGN 196
            G G  SGN+TD++  V   G+ Y+  +  K   +++        +G++ +H DNLFNG+
Sbjct: 144 TGKGLASGNYTDIDVVVTIQGEKYQNQRTDKTHFRVNEF-YCDFDVGHASIHLDNLFNGD 202

Query: 197 EELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           E L  + N FLNDNW+LV+AE+ P ++DTVS +       +   Y VD LLP
Sbjct: 203 ETLADAMNLFLNDNWKLVAAEMKPALEDTVSRLFKSFSNKIYAKYPVDTLLP 254

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|225544219|gb|ACN91529.1| CG10407-like protein [Ceratitis capitata]

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 135/227 (59%), Gaps = 2/227 (0%)

Query: 22  LPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVV 81
           + S++K C RN  +L+ C    + ++K  FH G+PEL IP + PL +P + +D   S  +
Sbjct: 1   IASFVKVCHRNDPNLDMCARQSLLAMKDLFHYGIPELFIPPITPLVIPEIKMDQD-SGAI 59

Query: 82  NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGN 141
              + F+N+ ++G     + ++ ++ K  +L++V+ +PKV M + Y M GK++++P+ GN
Sbjct: 60  YLHSTFKNITVNGLANYTINELHINPKKMRLTLVMSVPKVAMDAKYVMKGKIMMMPLMGN 119

Query: 142 GKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGR 201
           G    NF+DVE   L + + Y KN+  F K+    KV   +GN+E++  NLFNG+E LG 
Sbjct: 120 GDFKANFSDVELSTLITAERYIKNNSLFAKVKDV-KVQYSIGNAELYLSNLFNGDEALGE 178

Query: 202 STNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
             N FLN+NW  +S E+ P+++ ++S I       + D YS D LLP
Sbjct: 179 RMNTFLNENWSSLSNELRPMMETSISDIVRASATKIFDTYSFDDLLP 225

Source: Ceratitis capitata

Species: Ceratitis capitata

Genus: Ceratitis

Family: Tephritidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022223|ref|XP_002431540.1| protein takeout precursor, putative [Pediculus humanus corporis] gi|212516843|gb|EEB18802.1| protein takeout precursor, putative [Pediculus humanus corporis]

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 139/227 (61%), Gaps = 2/227 (0%)

Query: 22  LPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVV 81
           +P+++K C ++  +LN CV D ++ L+P    G+PE  IP  EPL +P + ++  G   V
Sbjct: 36  IPTFLKICSQSDPNLNGCVKDSVEKLRPHLVTGIPEFGIPPCEPLIVPEIVINQ-GKGPV 94

Query: 82  NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGN 141
             ++ + N+ + GA    +K +K++    ++ + L LP ++M SDYD++GK+L++PI G 
Sbjct: 95  TVQSTYTNIHVTGASQFVIKSIKVEPAKDRVRLKLWLPFLHMISDYDLDGKILMMPITGK 154

Query: 142 GKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGR 201
           G   GN+TD+EA+VL  G+ +EK  + +  +     V   +G++ +  D+LFNG++ELG 
Sbjct: 155 GMSEGNYTDIEANVLMEGERFEKKGQTYFNVKDF-FVHFNIGHASIRLDDLFNGDKELGD 213

Query: 202 STNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           + N+FLN NWE +  E+ P+++D +S +      N+   Y +D +LP
Sbjct: 214 AMNSFLNQNWESIVDEIKPVLEDRISDMFKTFSNNIYHKYPLDMILP 260

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|226693413|gb|ACO72854.1| AT18312p [Drosophila melanogaster]

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 136/230 (59%), Gaps = 2/230 (0%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
           A  LPS++K C RN+ DL++CV +  + L+PR  +G+PEL IP +EPL +P V +D   S
Sbjct: 56  ADQLPSFLKVCHRNAPDLDTCVRESYEELRPRLMEGIPELYIPAMEPLVVPQVKMDQD-S 114

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
             +   + +RN+K+ G     V +++L+    K  + L  PK++M SDY + GK++++P+
Sbjct: 115 GAIYLHSVYRNVKVTGISKHTVNELRLEPSKLKFILSLTFPKLHMESDYSIKGKIMMMPL 174

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEE 198
            G+G C  +  ++       G+ Y+KN   F+K++ T KV  +L +  +H DNLFNG++ 
Sbjct: 175 LGDGHCKVDLVNITMRTELIGQEYKKNGANFLKIN-TVKVKYELSDVHIHLDNLFNGDKA 233

Query: 199 LGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           LG   N FLN+NW+ ++ EV PL+   +  I       +   +S D LLP
Sbjct: 234 LGDRMNEFLNENWKALAEEVRPLMTKALVDILRASVDKLFASFSYDDLLP 283

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24647334|ref|NP_650519.1| CG10407, isoform A [Drosophila melanogaster] gi|442619355|ref|NP_001262622.1| CG10407, isoform B [Drosophila melanogaster] gi|7300097|gb|AAF55266.1| CG10407, isoform A [Drosophila melanogaster] gi|440217481|gb|AGB96002.1| CG10407, isoform B [Drosophila melanogaster]

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 136/230 (59%), Gaps = 2/230 (0%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
           A  LPS++K C RN+ DL++CV +  + L+PR  +G+PEL IP +EPL +P V +D   S
Sbjct: 31  ADQLPSFLKVCHRNAPDLDTCVRESYEELRPRLMEGIPELYIPAMEPLVVPQVKMDQD-S 89

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
             +   + +RN+K+ G     V +++L+    K  + L  PK++M SDY + GK++++P+
Sbjct: 90  GAIYLHSVYRNVKVTGISKHTVNELRLEPSKLKFILSLTFPKLHMESDYSIKGKIMMMPL 149

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEE 198
            G+G C  +  ++       G+ Y+KN   F+K++ T KV  +L +  +H DNLFNG++ 
Sbjct: 150 LGDGHCKVDLVNITMRTELIGQEYKKNGANFLKIN-TVKVKYELSDVHIHLDNLFNGDKA 208

Query: 199 LGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           LG   N FLN+NW+ ++ EV PL+   +  I       +   +S D LLP
Sbjct: 209 LGDRMNEFLNENWKALAEEVRPLMTKALVDILRASVDKLFASFSYDDLLP 258

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|213515582|gb|ACJ49255.1| RH45484p [Drosophila melanogaster]

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 136/230 (59%), Gaps = 2/230 (0%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
           A  LPS++K C RN+ DL++CV +  + L+PR  +G+PEL IP +EPL +P V +D   S
Sbjct: 52  ADQLPSFLKVCHRNAPDLDTCVRESYEELRPRLMEGIPELYIPAMEPLVVPQVKMDQD-S 110

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
             +   + +RN+K+ G     V +++L+    K  + L  PK++M SDY + GK++++P+
Sbjct: 111 GAIYLHSVYRNVKVTGISKHTVNELRLEPSKLKFILSLTFPKLHMESDYSIKGKIMMMPL 170

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEE 198
            G+G C  +  ++       G+ Y+KN   F+K++ T KV  +L +  +H DNLFNG++ 
Sbjct: 171 LGDGHCKVDLVNITMRTELIGQEYKKNGANFLKIN-TVKVKYELSDVHIHLDNLFNGDKA 229

Query: 199 LGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           LG   N FLN+NW+ ++ EV PL+   +  I       +   +S D LLP
Sbjct: 230 LGDRMNEFLNENWKALAEEVRPLMTKALVDILRASVGKLFASFSYDDLLP 279

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195328557|ref|XP_002030981.1| GM25738 [Drosophila sechellia] gi|194119924|gb|EDW41967.1| GM25738 [Drosophila sechellia]

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 137/229 (59%), Gaps = 2/229 (0%)

Query: 21  NLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQV 80
            LPS++K C RN+ DL++CV +  + L+PR  +G+PEL IP +EPL +P V +D   S  
Sbjct: 4   QLPSFLKVCHRNAPDLDTCVRESYEELRPRLIEGIPELYIPAMEPLVVPQVKMDQD-SGA 62

Query: 81  VNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRG 140
           +   + +RN+K+ G     V +++L+    K  + L  PK++M SDY + GK++++P+ G
Sbjct: 63  IYLHSVYRNVKVTGISKHTVNELRLEPSKLKFILSLTFPKLHMESDYSIKGKIMMMPLLG 122

Query: 141 NGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELG 200
           +G C+ +  ++       G+ Y+KN   F+K++ T KV  +L +  +H DNLFNG++ LG
Sbjct: 123 DGHCNVDLVNITMRTELIGQEYKKNGANFLKIN-TVKVKYELSDVHIHLDNLFNGDKALG 181

Query: 201 RSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPE 249
              N FLN+NW+ ++ EV PL+   +  I       +   +S D LLP+
Sbjct: 182 DRMNEFLNENWKALAEEVRPLMTKALVDILRASVDKLFASFSYDHLLPK 230

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195452154|ref|XP_002073236.1| GK14019 [Drosophila willistoni] gi|194169321|gb|EDW84222.1| GK14019 [Drosophila willistoni]

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 138/231 (59%), Gaps = 2/231 (0%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
           ++ LPS++K C R+S +LN C  +    LKPR   G+PEL IP +EPL +P V +D   S
Sbjct: 27  SSRLPSFLKVCYRDSPELNECAKESFLVLKPRLMDGIPELYIPPMEPLVVPEVKMDQD-S 85

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
             +   + ++N+K+ G     + D++++    K  + +  P+++M SDY + GK++++P+
Sbjct: 86  GAIYLHSVYKNVKITGISKHTLNDLRIEPSKHKFVVSMTFPQLHMESDYSIKGKIMMMPL 145

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEE 198
            G+G+C  + T++  +    G+ Y K+   F+++    KV  +L N  MH DNLFNG++ 
Sbjct: 146 LGDGRCKVDLTNITMNTELVGQEYTKHGSTFLRIIDV-KVKYELSNVHMHLDNLFNGDKA 204

Query: 199 LGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPE 249
           LG   N+FLN+NW+ ++ EV PL+   +  I       + +V+S D+LLP+
Sbjct: 205 LGERMNDFLNENWKSLAEEVRPLLTKALVDILRASIDKLFEVFSYDELLPK 255

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
FB|FBgn0038395	259	CG10407 [Drosophila melanogast	0.912	0.880	0.321	9.8e-32
FB|FBgn0039483	289	CG14259 [Drosophila melanogast	0.9	0.778	0.256	1.2e-19
FB|FBgn0037174	271	CG14457 [Drosophila melanogast	0.856	0.789	0.240	2.5e-19
FB|FBgn0039485	264	CG17189 [Drosophila melanogast	0.812	0.768	0.280	2.5e-19
FB|FBgn0038394	270	CG10264 [Drosophila melanogast	0.852	0.788	0.271	6.5e-19
FB|FBgn0037290	246	CG1124 [Drosophila melanogaste	0.96	0.975	0.264	1.4e-18
FB|FBgn0039298	249	to "takeout" [Drosophila melan	0.892	0.895	0.295	9.5e-18
FB|FBgn0039297	250	CG11852 [Drosophila melanogast	0.952	0.952	0.256	2e-17
FB|FBgn0039203	252	CG13618 [Drosophila melanogast	0.804	0.797	0.260	1.1e-16
FB|FBgn0000092	260	CG2650 [Drosophila melanogaste	0.844	0.811	0.261	3e-14

FB|FBgn0038395 CG10407 [Drosophila melanogaster (taxid:7227)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 74/230 (32%), Positives = 124/230 (53%)

Query:    19 AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXXXXXXVTLDSSGS 78
             A  LPS++K C RN+ DL++CV +  + L+PR  +G                V +D   S
Sbjct:    31 ADQLPSFLKVCHRNAPDLDTCVRESYEELRPRLMEGIPELYIPAMEPLVVPQVKMDQD-S 89

Query:    79 QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
               +   + +RN+K+ G     V +++L+    K  + L  PK++M SDY + GK++++P+
Sbjct:    90 GAIYLHSVYRNVKVTGISKHTVNELRLEPSKLKFILSLTFPKLHMESDYSIKGKIMMMPL 149

Query:   139 RGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEE 198
              G+G C  +  ++       G+ Y+KN   F+K++ T KV  +L +  +H DNLFNG++ 
Sbjct:   150 LGDGHCKVDLVNITMRTELIGQEYKKNGANFLKIN-TVKVKYELSDVHIHLDNLFNGDKA 208

Query:   199 LGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
             LG   N FLN+NW+ ++ EV PL+   +  I       +   +S D LLP
Sbjct:   209 LGDRMNEFLNENWKALAEEVRPLMTKALVDILRASVDKLFASFSYDDLLP 258

GO:0005615 "extracellular space" evidence=ISS;IDA

GO:0032504 "multicellular organism reproduction" evidence=IEP

FB|FBgn0039483 CG14259 [Drosophila melanogaster (taxid:7227)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 59/230 (25%), Positives = 105/230 (45%)

Query:    11 LVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXX--XX 68
             LV  V  Y+   P+++  C+        C  + I+ L  + + G                
Sbjct:    32 LVSAVAYYSEK-PAFLPSCRIYEPGFTKCSTNSIQKLLDQLNIGIPEVLERFGPFDPMRV 90

Query:    69 XXVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYD 128
               +      ++V   +AN  ++ + G     VK+ ++  K       ++LPK+ +   Y+
Sbjct:    91 RDIVFKQDNNEVATIRANLTDLVVKGFANTKVKESRVSKKDFSWQTKIYLPKMRLDGRYE 150

Query:   129 MNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMH 188
             M G++L++P+ G+GK      D++  +L   + YEK    F  + A  +V + L     +
Sbjct:   151 MAGRILLIPLSGSGKIFIEIDDLDILLLTKIRLYEKGGFTFDNVTAV-QVQLNLSKVRTY 209

Query:   189 FDNLFNG-NEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
              DNLFNG ++E+ RSTN F N+NW      + PL+ +TV  I Y +   V
Sbjct:   210 LDNLFNGRSKEVERSTNEFFNENWRDFYEALKPLIVETVENILYDVMSTV 259

GO:0005615 "extracellular space" evidence=ISS

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0037174 CG14457 [Drosophila melanogaster (taxid:7227)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/216 (24%), Positives = 96/216 (44%)

Query:    23 PSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXX-XXXXXVTLDSSGSQVV 81
             P YIK C+    D  +C    I+ L  + + G                 + +    S  +
Sbjct:    29 PDYIKECRIADKDFVNCSTHSIQQLFDKLNDGIPGLTSIRSFDPFYLNRIRITQGNSNAI 88

Query:    82 NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGN 141
             N K    N+K+ G    +V D ++  K         LP++ + +DY + G++L++P+ G 
Sbjct:    89 NLKVELANVKIIGFGHTNVLDSQVFKKDYSWKTTFTLPEMKLQADYSLFGRILLIPLNGK 148

Query:   142 GKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGR 201
             G+   +  ++   +    + Y K    F  +     V  K+   + +F NLFNGN++L  
Sbjct:   149 GQVFLDAENMTVTMHTKTRLYSKGGFTFYNV-TNLHVDFKMDGLKSYFSNLFNGNKQLED 207

Query:   202 STNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
             STN F NDNW +++  +  ++  T+  I   + K +
Sbjct:   208 STNKFFNDNWRMLADALYTVITQTIEDILLDVLKKI 243

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0039485 CG17189 [Drosophila melanogaster (taxid:7227)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 58/207 (28%), Positives = 96/207 (46%)

Query:    23 PSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXX--XXXXVTLDSSGSQV 80
             PSYI+ CK    +   C    I++   +  +G                  +      S V
Sbjct:    20 PSYIESCKIYEPEFTKCSTRSIQAFMNQLVKGVPEIEESFGPIDPMRQEQLVFKQDNSDV 79

Query:    81 VNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRG 140
                 AN  +M + G   + +K+ K+  K       ++LP++ +   Y M G++L++P++G
Sbjct:    80 ATLSANLTDMLIRGFGKMLIKESKVSKKDFSWLTKIYLPQMRIDGHYKMVGRILLVPLQG 139

Query:   141 NGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGN-EEL 199
             NGK      D++  +    + YEK    F  + +  KV + +G      DNLFNG+ +E+
Sbjct:   140 NGKIVMEIDDLDILMTTKTRLYEKGGYTFYNVTSV-KVKVDVGKVRTRLDNLFNGHSKEV 198

Query:   200 GRSTNNFLNDNWELVSAEVIPLVQDTV 226
               STN F NDNW+ V   + PLV +TV
Sbjct:   199 EDSTNQFFNDNWKDVFEALRPLVVETV 225

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0038394 CG10264 [Drosophila melanogaster (taxid:7227)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 59/217 (27%), Positives = 106/217 (48%)

Query:    23 PSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXXXXXXVTLDSSGSQVVN 82
             PS+++ CKR++ + + C   + +   P    G                V++ S GS  + 
Sbjct:    45 PSWLQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVKSFEPLNIDQVSV-SKGSGNLV 103

Query:    83 FKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNG 142
                 F+++ + G     V+   LD + R L+  L LP++ + + Y++ G +L+LP+ G+G
Sbjct:   104 LSGGFQDLVIRGPSNATVRRASLDLERRLLNFELELPRLRIRAKYNLKGNILLLPLVGSG 163

Query:   143 KCSGNFTDVEADVL--FSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELG 200
               +    +V   V    S +   +   + + +D   KV   +G   +H  NLFNGNE L 
Sbjct:   164 DVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEM-KVGFDVGAMRIHLKNLFNGNEILA 222

Query:   201 RSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
              S N+FLN N + V AE+ P ++  ++ I + L+ NV
Sbjct:   223 ASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNV 259

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0037290 CG1124 [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 66/250 (26%), Positives = 111/250 (44%)

Query:     1 MDNFFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXX 60
             M+   C V+ ++  +++  A  P YIK C RN   L  C I  I+ LKP    G      
Sbjct:     1 MNKAVCLVI-VIQALRMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYLANGIPDIQL 59

Query:    61 XXXXXXXXXXVTLD-SSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLP 119
                       + L  + G Q   +K   +NM+  GA    V  +KL          + +P
Sbjct:    60 PSVEPFKMDTLALQLTEGPQ--GYKITLKNMEAFGASNFKVTSLKLSEGSEPFKAKIVMP 117

Query:   120 KVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVS 179
             K+ + + Y  +G +L+LP  G G    NF  V AD+      +      ++ +DA   V 
Sbjct:   118 KLKIEAKYTSSGVLLILPASGGGDFHANFEGVSADLTGKTSIHAFKGANYLHIDALSLV- 176

Query:   180 IKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVST----ISYQLFK 235
             + + + +M     FN N  L  +TN FL +N ++V   +   +Q  +++    ++ QL K
Sbjct:   177 LDVKDVKMSISGAFNNNRILLEATNLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLK 236

Query:   236 NV-LDVYSVD 244
             NV ++ + VD
Sbjct:   237 NVPVEQFYVD 246

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0039298 to "takeout" [Drosophila melanogaster (taxid:7227)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 71/240 (29%), Positives = 111/240 (46%)

Query:     5 FCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSL-KPRFHQGXXXXXXXXX 63
             F  VL L+++V    A  P   KPCK    +   C++ +  +L      +G         
Sbjct:     6 FAVVLCLLVSVD---AKFPEDPKPCKYGDGE---CIMKLCNTLFSENSAEGDPGLNLMQL 59

Query:    64 XXXXXXXVTLDSS-GSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSM---VLHLP 119
                    + +     S  V     F +  L+G K  D + VK+   GR L+    V  + 
Sbjct:    60 DPLKVDRMVISQGESSSPVGITLTFTDNLLYGIK--DQRIVKVKGFGRDLTAKHEVKIVT 117

Query:   120 KVY-MTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATP-K 177
             K + +   Y++ GKVL+LPI G G+ +    +V A V FSGK   KN + +  LD T  K
Sbjct:   118 KTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLVKNGETY--LDVTDLK 175

Query:   178 VSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
             +++K  +S  HF NLFNG++ LG + N FLN+N E +  E    +  +   +   + K V
Sbjct:   176 ITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGV 235

GO:0005576 "extracellular region" evidence=IDA

GO:0042595 "behavioral response to starvation" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP;NAS;TAS

GO:0007631 "feeding behavior" evidence=NAS;TAS

GO:0008049 "male courtship behavior" evidence=IGI;IMP

GO:0042594 "response to starvation" evidence=TAS

GO:0007622 "rhythmic behavior" evidence=TAS

GO:0003674 "molecular_function" evidence=ND

GO:0007617 "mating behavior" evidence=TAS

GO:0005615 "extracellular space" evidence=IDA

GO:0008343 "adult feeding behavior" evidence=IMP

FB|FBgn0039297 CG11852 [Drosophila melanogaster (taxid:7227)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 64/250 (25%), Positives = 109/250 (43%)

Query:     6 CYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXX 65
             C  LF  L     A+N P  +  C    +   SC+I++   L  R H             
Sbjct:     8 CVALFCCLVSG--ASNFPPELPRCHMGDT---SCIINVSHMLI-RQHARTGYPSAGFPQV 61

Query:    66 XXXXXVTLDSSGSQV--VNFKANFRNMKLHGAKTLDV-KDVKL--DYKGRKLSMVLHLPK 120
                     D S  +   +N K NFR++ + G  ++   + V    D    K  M    PK
Sbjct:    62 EPFLIKRFDISDGRTGSLNLKLNFRDVNVEGLSSVKFDRAVGFGADPATSKFEMYGSFPK 121

Query:   121 VYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSI 180
             + +   Y  +G++L+LPIRG+G       + +  V F     ++N + ++ +D   KV +
Sbjct:   122 IVLKGKYVADGRILILPIRGDGDAEIVLHNPKFSVKFKPGTQQRNGRTYLSVDKL-KVLV 180

Query:   181 KLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDV 240
             +     +  +NLFNG++ LG + N FLNDNW  V  E+ P +   ++ I   +   +   
Sbjct:   181 EPQKMNIRLENLFNGDQALGTNLNQFLNDNWTEVWNELHPSIHVAIAEIMKSVLSQLFKR 240

Query:   241 YSVDQLLPEN 250
             ++ + L  EN
Sbjct:   241 FAYEDLFLEN 250

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0039203 CG13618 [Drosophila melanogaster (taxid:7227)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 54/207 (26%), Positives = 101/207 (48%)

Query:    13 LTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXXXXXXVT 72
             LTV   A  LP     CKR+++  + C++D +     +   G                + 
Sbjct:    20 LTVTA-AQELPEGFPKCKRDAN-FDKCLVDAVNVAIQQLKAGNREFGIPPLEPLTVKKLV 77

Query:    73 LDSSGSQVVNFKANFRNMKLHGA-KTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNG 131
             +D+ G+  +N +   +N+K+H    T  ++  + D     +       ++ M  DY+M+G
Sbjct:    78 IDA-GNAPINLRQALKNVKVHDMISTSKIQRYRTDLDKHLIICDSRTDRIEMIGDYEMSG 136

Query:   132 KVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDN 191
             ++L+LPI G+GK +    + + +    G+ +EK+  ++++L    +VS       M+F+N
Sbjct:   137 RILLLPITGHGKANVTLINTKIEHRLIGEPFEKDGVKYMRLKDY-RVSFDPKRVYMNFEN 195

Query:   192 LFNGNEELGRSTNNFLNDNWELVSAEV 218
             LFN ++ L    N FLN+NWE V  E+
Sbjct:   196 LFN-DKTLSDGMNRFLNENWETVFNEL 221

GO:0005615 "extracellular space" evidence=ISS

FB|FBgn0000092 CG2650 [Drosophila melanogaster (taxid:7227)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 59/226 (26%), Positives = 103/226 (45%)

Query:    23 PSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXXXXXXVTLDSSG-SQVV 81
             PS +K CK       SC++   ++    F  G                + ++S G S+ +
Sbjct:    30 PSPLKRCKLQDE---SCLLAQAQTFFQAFKNGIPERQVAALEPIALGTMFIESGGHSESI 86

Query:    82 NFKANFRNMKLHG-AKTLDVKDVK---LDY-KGRKLSMVLHLPKVYMTSDYDMNGKVLVL 136
              FK    + KL+  A ++ VK +K    D  +  KL+++L  P++ + + YD++GK+L+L
Sbjct:    87 KFKLTMSDAKLYNLANSMMVKSLKGFTKDLTRPLKLTLLLDNPELEVRAKYDVDGKLLIL 146

Query:   137 PIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATP-KVSIKLGNSEMHFDNLFNG 195
             PI   G  +    DV   V  + +  +++      L+ T  K + K+        NLFN 
Sbjct:   147 PIVSKGDLTIRLNDVHTKVWITAEPVKRSDGH-TYLNITDYKTATKIKGGHFDLSNLFND 205

Query:   196 NEELGRSTNNFLNDNWELVSAEVIPLVQDTV----STISYQLFKNV 237
             N+EL  ST   LN  W  ++ +V P + +      S I   L+ N+
Sbjct:   206 NKELRDSTLKVLNQEWSTLALDVQPKINEACAKAFSAIVQSLWANI 251

GO:0007623 "circadian rhythm" evidence=IEP

GO:0005615 "extracellular space" evidence=ISS

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	250
pfam06585	246	pfam06585, JHBP, Haemolymph juvenile hormone bindi	4e-68
smart00700	224	smart00700, JHBP, Juvenile hormone binding protein	9e-51

>gnl|CDD|219095 pfam06585, JHBP, Haemolymph juvenile hormone binding protein (JHBP)

 Score =  209 bits (535), Expect = 4e-68
 Identities = 78/244 (31%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 4   FFCYVLFLVLTVQIYAANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPIL 63
               +L L+  V    A LP++++ C R+  + N C+ + I++L+P   +G+PEL IP L
Sbjct: 5   VVLLLLVLLALVLSAGALLPAFLEKCSRSDPNDNKCLKESIQALRPYLAKGIPELGIPPL 64

Query: 64  EPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYM 123
           +PL +  + +   GS  +  KANF+N+K++G     +K +KLD    K  + L+ PK+ +
Sbjct: 65  DPLVIDDLKISQ-GSGPIGLKANFKNLKIYGLSNFTIKKLKLDLDKLKFELKLYFPKLSL 123

Query: 124 TSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLG 183
              Y + GK+L+LPI G G  +    +V+A     G+ YE++ K ++K+    KV I +G
Sbjct: 124 KGKYKLKGKLLLLPISGKGDFNLTLENVKATGKLKGRLYERDGKTYLKVT-KLKVEIDVG 182

Query: 184 NSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSV 243
           + +   +NLFNGN+ELG + N F+N+NW+ +  E+ P +++ +  I   +   +      
Sbjct: 183 DVKFDLENLFNGNKELGDAMNKFINENWKELLNELKPAIEEALEKIFVDILNKIFKKVPY 242

Query: 244 DQLL 247
           D L 
Sbjct: 243 DDLF 246

This family consists of several insect-specific haemolymph juvenile hormone binding proteins (JHBP). Juvenile hormone regulates embryogenesis, maintains the status quo of larval development and stimulates reproductive maturation in the adult insect. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph. The crystal structure of the JHBP from Galleria mellonella shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organisation of the major cavity and a disulfide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance. This family now includes DUF233, pfam03027. Length = 246

>gnl|CDD|214779 smart00700, JHBP, Juvenile hormone binding protein domains in insects

 Score =  165 bits (419), Expect = 9e-51
 Identities = 67/228 (29%), Positives = 124/228 (54%), Gaps = 5/228 (2%)

Query: 20  ANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQ 79
           A  P+++KPCK    D + C+ D I++L P+   G+PE  IP L+PL +  + +    S 
Sbjct: 1   AEGPAFLKPCKLG--DPSECLRDAIEALLPQLKNGIPEYGIPPLDPLEIDDLKISI-DSG 57

Query: 80  VVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIR 139
           V+  +  F+N+K++G    ++   K+D K +K+ + +  PK+ +  DY ++G++L LP+ 
Sbjct: 58  VIGLRLTFKNVKIYGLSNFEITKFKMDLKDKKIELKIEFPKLNVKGDYKLDGRLLGLPLN 117

Query: 140 GNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEEL 199
           G G  +    +V+       K          K+ +  KV+ ++G+ + H DNLFNGN++L
Sbjct: 118 GKGDANFTLENVKIRGTLKLKLGPDGKTYL-KIKSL-KVNFEVGDVKSHLDNLFNGNKDL 175

Query: 200 GRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLL 247
             + N FLN+NW+ +  E++P + + + +I   L   V     +D+  
Sbjct: 176 NDAINKFLNENWKALINELLPAIVEKLESIFLDLVNKVFAKVPIDEFF 223

The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions. Length = 224

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
smart00700	225	JHBP Juvenile hormone binding protein domains in i	100.0
PF06585	248	JHBP: Haemolymph juvenile hormone binding protein	100.0
smart00328	225	BPI1 BPI/LBP/CETP N-terminal domain. Bactericidal	97.85
cd00025	223	BPI1 BPI/LBP/CETP N-terminal domain; Bactericidal	97.6
PF07294	198	Fibroin_P25: Fibroin P25; InterPro: IPR009911 This	95.89
PF01273	164	LBP_BPI_CETP: LBP / BPI / CETP family, N-terminal	95.84
PF06585	248	JHBP: Haemolymph juvenile hormone binding protein	95.73
KOG4160|consensus	492		94.46
smart00700	225	JHBP Juvenile hormone binding protein domains in i	89.77

>smart00700 JHBP Juvenile hormone binding protein domains in insects

Probab=100.00  E-value=5.2e-58  Score=390.76  Aligned_cols=225  Identities=30%  Similarity=0.669  Sum_probs=219.6

Q ss_pred             ccCCCCCcccCCCCCCcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecCCCceeEEEEEEEeeEEEcccceE
Q psy4431          20 ANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLD   99 (250)
Q Consensus        20 ~~~p~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~~~~~~~~~~~l~n~~i~Gl~~~~   99 (250)
                      +++|+++++|+|+||  ++|+++++|+++|+|++|+||+|+||+||+.++++++.. ++++++++++++|++++|+++++
T Consensus         1 ~~~p~~~~~C~~~dp--~~Ci~~~~~~~~~~~~~G~Pe~gip~ldPl~i~~~~i~~-~~~~~~~~~~~~n~~i~Gl~~~~   77 (225)
T smart00700        1 AEGPAFLKPCKLGDP--SECLRDAIEALLPQLKNGIPEYGIPPLDPLEIDDLKISI-GSGVIGLRLTFKNVKIYGLSNFE   77 (225)
T ss_pred             CCCCCCCCcCCCCCh--hHHHHHHHHHHHHHHhcCCCccCCCCcCCEEeeeEEEec-CCCceEEEEEEEEeEEEcCcceE
Confidence            368999999999999  999999999999999999999999999999999999988 67889999999999999999999


Q ss_pred             EEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEE
Q psy4431         100 VKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVS  179 (250)
Q Consensus       100 i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~  179 (250)
                      |++++.|+.+.++.+++++|+++++|+|+++|+++.+||.|+|+++++++|+++.++++++.+. +|++|++++++ +++
T Consensus        78 i~~~~~~~~~~~~~~~~~~p~l~~~g~Y~~~g~ll~lpi~g~G~~~~~l~n~~~~~~~~~~~~~-~g~~yl~i~~~-~~~  155 (225)
T smart00700       78 ITKFKMDLKDKKIELKIEFPKLNVKGDYKLDGRLLGLPLNGKGDANFTLENVKIRGTLKLKLGP-DGKTYLKIKSL-KVN  155 (225)
T ss_pred             EEEEEecCCCcEEEEEEECCcEEEEeeeEeeeEEEEEEecCCCcEEEEEEeeEEEEEEEEEEcc-CCeEEEEEEEE-EEE
Confidence            9999999999999999999999999999999999999999999999999999999999999877 89999999999 999


Q ss_pred             EEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccCccccCCC
Q psy4431         180 IKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLPE  249 (250)
Q Consensus       180 ~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~vp~~~lf~~  249 (250)
                      +++++++++++|||+||++|++.+|+++|+||++++++++|.+++++++++.+++|++|+++|++++|+.
T Consensus       156 ~~~~~~~~~~~NLfngn~~L~~~~n~~lNen~~~i~~e~~p~i~~~~~~~~~~~~n~~~~~vp~~~~f~~  225 (225)
T smart00700      156 FEVGDVKSHLDNLFNGNKDLNDAINKFLNENWKALINELLPAIVEKLESIFLDLVNKVFAKVPIDEFFVD  225 (225)
T ss_pred             EEeceEEEEeeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHhhcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999974

The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions.

>PF06585 JHBP: Haemolymph juvenile hormone binding protein (JHBP); InterPro: IPR010562 This family consists of several insect specific haemolymph juvenile hormone binding proteins (JHBP)

Probab=100.00  E-value=7.7e-59  Score=400.89  Aligned_cols=245  Identities=36%  Similarity=0.691  Sum_probs=207.5

Q ss_pred             CCCeeeehhhHHhhhhh-hhcc--CCCCCcccCCCCCCcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecCC
Q psy4431           1 MDNFFCYVLFLVLTVQI-YAAN--LPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSG   77 (250)
Q Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~--~p~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~~   77 (250)
                      |+.+..+++++++++++ +++.  +|+++++|+|+||++++|+++++|+++|+|++|+||+|+||+||+++++++++. +
T Consensus         1 M~~~~~~~~l~~~~~~~~~~~~~~~p~~~~~C~~~~~~~~~cl~~~~~~~~~~l~~Gip~l~ip~ldPl~i~~~~~~~-~   79 (248)
T PF06585_consen    1 MKLLVLFFLLVLVFSVASSAALQELPSYIKPCKRSDPNLNECLRESIENFRPYLAKGIPELGIPPLDPLYIPEIDINF-N   79 (248)
T ss_dssp             ----------------------S--S-S---BBTT----HHHHHHHHHHHHHHHTCEBGGGTBEETTTEEEEEEEEEE--
T ss_pred             CcchHHHHHHHHHHHHHHhcccccCCcccCcCCCCCccHHHHHHHHHHHHHHhhcCCCcccCCCCCCCEEecceEEEe-e
Confidence            66654444444444322 2222  699999999999999999999999999999999999999999999999999999 8


Q ss_pred             CceeEEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEE
Q psy4431          78 SQVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLF  157 (250)
Q Consensus        78 ~~~~~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~  157 (250)
                      ++.+++++.++|++++|+++++|+++++|+.+.++++++++|+++++|+|+++|+++.+||.|+|+++++++|+++++++
T Consensus        80 ~~~~~~~~~~~n~~i~Gls~~~v~~~~~d~~~~~~~~~~~~P~l~i~g~Y~~~g~i~~~pi~g~G~~~~~l~~~~~~~~~  159 (248)
T PF06585_consen   80 SGPINLKANFKNVKIYGLSNFEVNKVSVDLKKLKLNFDLTFPKLSIKGKYEIDGKILLLPISGKGDFNITLENVRATGTI  159 (248)
T ss_dssp             TTCTTEEEEEEEEEEESGGG-EEEEEEEETTTTEEEEEEEE-EEEEEEEEEEEEEECCECCCTEEEEEEEEEEEEEEEEE
T ss_pred             cCCceEEEEEEeEEEeccCCcEEEEEEEcCCCcEEEEEEEEEEEEEEEEEEEeeeeeeeEEeccceEEEEeeeEEEEEEE
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy4431         158 SGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV  237 (250)
Q Consensus       158 ~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~  237 (250)
                      +++.+.++|++|++++++ ++++++|+++++++|||+||+++++.+|+++|+||++++++++|.+++.+++++.+++|++
T Consensus       160 ~~~~~~~~g~~~l~i~~~-~~~~~~~~~~~~~~nl~~g~~~l~~~~n~~in~~~~~~~~~~~p~i~~~~~~~i~~~~N~~  238 (248)
T PF06585_consen  160 KGEVYKKNGKTYLRITNF-KIDFDLGNVKFDLENLFNGNKELSDFINKFINENWPELLNEVKPDIEEILSKIITDIINKI  238 (248)
T ss_dssp             EEEEEEETS-EEEEEEEE-EEEEEECEEEEEESHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCccEEEEEEE-EEEEEeceEEEEeeccCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988999999999999 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCccccC
Q psy4431         238 LDVYSVDQLL  247 (250)
Q Consensus       238 ~~~vp~~~lf  247 (250)
                      |+++|++++|
T Consensus       239 l~~~p~~~lf  248 (248)
T PF06585_consen  239 LSKVPYDELF  248 (248)
T ss_dssp             HHHS-CCHCB
T ss_pred             HHhCCHHHhC
Confidence            9999999987

Juvenile hormone (JH) has a profound effect on insects. It regulates embryogenesis, maintains the status quo of larva development and stimulates reproductive maturation in the adult forms. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph []. The crystal structure of the JHBP from Galleria mellonella (Wax moth) shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organisation of the major cavity and a disulphide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance [, ].; PDB: 3A1Z_D 3AOS_B 3AOT_A 2RQF_A 2RCK_A 3E8W_A 3E8T_A.

>smart00328 BPI1 BPI/LBP/CETP N-terminal domain

Probab=97.85  E-value=0.004  Score=52.99  Aligned_cols=148  Identities=9%  Similarity=0.091  Sum_probs=86.2

Q ss_pred             EEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEEEEEE
Q psy4431          82 NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKF  161 (250)
Q Consensus        82 ~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~~~~~  161 (250)
                      .+...++|+++..++--. ..+++.+. .-+.+.+.=-.+.++|+++.....    |.-.|.+++.++.+++.+.+....
T Consensus        41 ~v~~~~~~i~I~~~~~~~-s~~~~~p~-~Gi~l~is~~si~~~~~~~~~~~~----i~~~G~~~~~v~~~~i~~~l~l~~  114 (225)
T smart00328       41 IGHYSIYSLSISRLELPS-SQLRFQPS-KGLRLSISNLSLRVSGDLKGSLNF----IKLEGNFQLSVEGLSISADLRIES  114 (225)
T ss_pred             EEEEEEEEEEEEeccCCC-CccccCCC-CceEEEEcCceEEEEEEEEEEEEE----EEeeeEEEEEEeeEEEEEEEEecc
Confidence            366677777776654322 22223222 224443332345566665554433    677888999999998888888764


Q ss_pred             EEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy4431         162 YEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVY  241 (250)
Q Consensus       162 ~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~v  241 (250)
                       +.+|+  .++.-. +....++++++++.+-     ..+...|.|-+.--..+-..++..|=+.+...+...+|..++.+
T Consensus       115 -~~~G~--p~v~~~-~C~~~i~~v~l~~~G~-----~~swl~n~f~~~i~~~i~~~l~~~IC~~i~~~i~~~l~~~L~~l  185 (225)
T smart00328      115 -NPTGR--PTVTLS-SCSSSIGDVRLHFSGS-----VLGWLINLFRKFIENTLRNVLEGQICPVIDSAVSNKMNDYLQTL  185 (225)
T ss_pred             -CCCCC--eeEEeC-CcccCcceEEEEEECC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence             35776  555555 6677889999999842     22333444443333334334444444444445555678888887


Q ss_pred             Ccc
Q psy4431         242 SVD  244 (250)
Q Consensus       242 p~~  244 (250)
                      |..
T Consensus       186 p~~  188 (225)
T smart00328      186 PLS  188 (225)
T ss_pred             cee
Confidence            764

Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain

>cd00025 BPI1 BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria

Probab=97.60  E-value=0.016  Score=49.29  Aligned_cols=145  Identities=12%  Similarity=0.118  Sum_probs=89.1

Q ss_pred             EEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEEEEEE
Q psy4431          82 NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKF  161 (250)
Q Consensus        82 ~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~~~~~  161 (250)
                      .++..++|+++++++=-.. ++++-+ ..-+.+.+.-..+.++|+.+...+    ++.-.|.+++.+.++.+++.+.++.
T Consensus        45 ~v~~~~s~i~I~~~~lp~s-~l~~~~-~~gi~~~~s~~si~l~~~w~~~~~----~i~~~G~~~l~v~gv~i~~~l~l~~  118 (223)
T cd00025          45 KGRVGLSNKEIQELKLPSS-SIKLVE-VKGLDLSISNVSIGLSGVWKYNYR----FILDGGNVELSVEGMNIQADLRLGR  118 (223)
T ss_pred             EEEEEEEeEEEEEEecCCC-ceEEcC-CCceEEEEeCCeEEEEEEEEEeeE----EEEecEEEEEEEeEEEEEEEEEEee
Confidence            5777788888776643221 122222 234444444455656665555443    4677788999999998888888764


Q ss_pred             EEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy4431         162 YEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVY  241 (250)
Q Consensus       162 ~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~v  241 (250)
                      . ..|+  .++.-- +....++++++++.+   | .  +...+.|.+.--..+-..++..+=+.+...+....|.+++ +
T Consensus       119 d-~~G~--p~v~~~-~C~~~v~~~~i~l~g---g-~--~~l~~~f~~~i~~~l~~~l~~~iCp~i~~~i~~~~~~~l~-l  187 (223)
T cd00025         119 D-PSGR--PKLSLS-DCSSTVGSLRVHLGG---S-L--GWLAKLFMNFIESLLKKVLKGQLCPVIDASLVSMLESLLQ-L  187 (223)
T ss_pred             C-CCCC--eEEEeC-CCCcccCcEEEEEeC---C-h--HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhhhcC-C
Confidence            2 2376  555555 667889999999984   2 2  5555666655555555555555555555555555566666 5


Q ss_pred             Cc
Q psy4431         242 SV  243 (250)
Q Consensus       242 p~  243 (250)
                      |.
T Consensus       188 p~  189 (223)
T cd00025         188 PK  189 (223)
T ss_pred             ce
Confidence            54

; Apolar pockets on the concave surface bind a molecule of phosphatidylcholine, primarily by interacting with their acyl chains; this suggests that the pockets may also bind the acyl chains of lipopolysaccharide.

>PF07294 Fibroin_P25: Fibroin P25; InterPro: IPR009911 This family consists of several insect fibroin P25 proteins

Probab=95.89  E-value=0.038  Score=44.75  Aligned_cols=88  Identities=19%  Similarity=0.345  Sum_probs=69.6

Q ss_pred             CcccCCCCCCcchHHHHHHHHHhhhhcCCCCC-CC-CCCCCceEeCceEEecCCCceeEEEEEEEeeEEEcccceEEEEE
Q psy4431          26 IKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPE-LK-IPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVKDV  103 (250)
Q Consensus        26 i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPe-lg-ip~ldPl~i~~~~i~~~~~~~~~~~~~l~n~~i~Gl~~~~i~~~  103 (250)
                      ..+|+..|   =+||++.+-+=-    +=.|. .| ||  +|+.++..+++-   +-.+.+....|+.++|...+.|..+
T Consensus         3 vRPC~l~D---l~CI~dnlaaNS----~C~~~V~G~vP--s~y~i~~frfd~---P~fNaTyid~Nl~~rn~d~c~VsEF   70 (198)
T PF07294_consen    3 VRPCPLFD---LKCIRDNLAANS----QCKPNVRGSVP--SPYTIPHFRFDT---PFFNATYIDYNLIIRNHDKCRVSEF   70 (198)
T ss_pred             cccccccc---HHHHHHHhhhhc----cCcCCCCCCCC--CccccccEEeec---ccccceeEeeeeEeccCCceEEEEE
Confidence            46899999   999999853211    11222 22 44  899999998876   3457888899999999999999999


Q ss_pred             EEccCCcEEEEEEEeeeEEEEE
Q psy4431         104 KLDYKGRKLSMVLHLPKVYMTS  125 (250)
Q Consensus       104 ~~d~~~~~~~~~~~~P~i~~~g  125 (250)
                      -++.+..+.-+.+.+|.+.+++
T Consensus        71 f~N~~t~k~VLs~Dcp~L~~eS   92 (198)
T PF07294_consen   71 FFNMKTDKAVLSVDCPNLDFES   92 (198)
T ss_pred             EEecccceEEEEEecCcccCcC
Confidence            9999999999999999998765

Silk fibroin produced by the silkworm Bombyx mori consists of a heavy chain, a light chain, and a glycoprotein, P25. The heavy and light chains are linked by a disulphide bond, and P25 associates with disulphide-linked heavy and light chains by noncovalent interactions. P25 is plays an important role in maintaining integrity of the complex [].; GO: 0005198 structural molecule activity, 0005576 extracellular region

>PF01273 LBP_BPI_CETP: LBP / BPI / CETP family, N-terminal domain; InterPro: IPR017942 This entry represents the N-terminal domain found in several lipid-binding serum glycoproteins

Probab=95.84  E-value=0.71  Score=36.73  Aligned_cols=109  Identities=14%  Similarity=0.260  Sum_probs=55.5

Q ss_pred             ceEeCceEEecCCCc-eeEEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeee
Q psy4431          65 PLNLPLVTLDSSGSQ-VVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGK  143 (250)
Q Consensus        65 Pl~i~~~~i~~~~~~-~~~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~  143 (250)
                      .+.+|++.-.. ..+ .-.....+.++++..++--. .++++-+...-....... .+.++|++...+.+.  ++     
T Consensus        19 ~~~ipdi~~~~-~~~~~g~~~~~i~~i~I~~~~~~~-~~l~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~i--~~-----   88 (164)
T PF01273_consen   19 KIQIPDISGSF-SSPFIGSVKYNISNIKISNFRLPQ-SSLELSPDGGIVLSIIPA-SASLSGNWPYKGGFI--KI-----   88 (164)
T ss_dssp             C-----EEEEE-CETTTCCEEEEEEEEEEEEEEEEE-EEEEEETTTEEEEEEEEE-EEEEEEEEEEEECCE--EE-----
T ss_pred             cCCCCCccccc-ccccccceEEEEEeEEEEEeecCC-ccceECCCCceEEEEeee-EEEEEEEEecCCChh--hh-----
Confidence            34455555444 211 11466778888776544333 233333333221111111 466677666664332  22     


Q ss_pred             eEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecc
Q psy4431         144 CSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDN  191 (250)
Q Consensus       144 ~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~n  191 (250)
                          ..++.+++.+..+. +.+|+-.+.+.   +...+++++++.+.+
T Consensus        89 ----~~~v~i~~~i~l~~-~~~G~~~v~~~---~C~~~i~~v~i~~~g  128 (164)
T PF01273_consen   89 ----AVGVDISVTIRLER-DESGRPTVVVG---SCSSDIGSVDIKLHG  128 (164)
T ss_dssp             ----EEEEEEEEEEEEEE-ECCTEEEEEEE---EEEEEEEEEEEEETT
T ss_pred             ----eeeEEEEEEEEEEE-cCCCCeEEEEC---CCccCcceEEEEECC
Confidence                55666666666654 33487555555   557789999998885

The N- and C-terminal domains share a similar two-layer alpha/beta structure, but they show little sequence identity. Proteins containing this N-terminal domain include: Bactericidal permeability-increasing protein (BPI) Lipopolysaccharide-binding protein (LBP) Cholesteryl ester transfer protein (CETP) Phospholipid transfer protein (PLTP) Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) Bactericidal permeability-increasing protein (BPI) is a potent antimicrobial protein of 456 residues that binds to and neutralises lipopolysaccharides from the outer membrane of Gram-negative bacteria []. BPI contains two domains that adopt the same structural fold, even though they have little sequence similarity []. Lipopolysaccharide-binding protein (LBP) is an endotoxin-binding protein that is closely related to, and functions in a co-ordinated manner with BPI to facilitate an integrated host response to invading Gram-negative bacteria []. Cholesteryl ester transfer protein (CETP) is a glycoprotein that facilitates the transfer of lipids (cholesteryl esters and triglycerides) between the different lipoproteins that transport them through plasma, including HDL, LDL, VLDL and chylomicrons. These lipoproteins shield the lipids from water by encapsulating them within a coating of polar lipids and proteins []. Phospholipid transfer protein (PLTP) exchanges phospholipids between lipoproteins and remodels high-density lipoproteins (HDLs) []. Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) is a potential host defensive protein that is secreted from the submucosal gland to the saliva and nasal lavage fluid. PLUNC appears to be a secreted product of neutrophil granules that participates in an aspect of the inflammatory response that contributes to host defence []. Short palate, lung and nasal epithelium clone 1 (SPLUNC1) may bind the lipopolysaccharide of Gram-negative nanobacteria, thereby playing an important role in the host defence of nasopharyngeal epithelium [].; GO: 0008289 lipid binding; PDB: 1EWF_A 1BP1_A 2OBD_A.

>PF06585 JHBP: Haemolymph juvenile hormone binding protein (JHBP); InterPro: IPR010562 This family consists of several insect specific haemolymph juvenile hormone binding proteins (JHBP)

Probab=95.73  E-value=0.35  Score=41.33  Aligned_cols=175  Identities=17%  Similarity=0.287  Sum_probs=78.8

Q ss_pred             CCCcccCCCCCCcchHHHHHHHHHhhhhc-CCCCCCCCCCCCceEeCc--------------------------eEEecC
Q psy4431          24 SYIKPCKRNSSDLNSCVIDIIKSLKPRFH-QGLPELKIPILEPLNLPL--------------------------VTLDSS   76 (250)
Q Consensus        24 ~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~-~GiPelgip~ldPl~i~~--------------------------~~i~~~   76 (250)
                      +.+..|-+.      .+++....+..=++ -|+|.+.==.++.+.+..                          ++++. 
T Consensus        37 ~~~~~cl~~------~~~~~~~~l~~Gip~l~ip~ldPl~i~~~~~~~~~~~~~~~~~~~n~~i~Gls~~~v~~~~~d~-  109 (248)
T PF06585_consen   37 PNLNECLRE------SIENFRPYLAKGIPELGIPPLDPLYIPEIDINFNSGPINLKANFKNVKIYGLSNFEVNKVSVDL-  109 (248)
T ss_dssp             ---HHHHHH------HHHHHHHHHTCEBGGGTBEETTTEEEEEEEEEE-TTCTTEEEEEEEEEEESGGG-EEEEEEEET-
T ss_pred             ccHHHHHHH------HHHHHHHhhcCCCcccCCCCCCCEEecceEEEeecCCceEEEEEEeEEEeccCCcEEEEEEEcC-
Confidence            347888865      56666666666555 388887633344444444                          22222 


Q ss_pred             CCceeEEEEEEEeeEEEcccceEEEEEE-EccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEE
Q psy4431          77 GSQVVNFKANFRNMKLHGAKTLDVKDVK-LDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADV  155 (250)
Q Consensus        77 ~~~~~~~~~~l~n~~i~Gl~~~~i~~~~-~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~  155 (250)
                      ....+++++.+.++.+.|  +++++--- .-+...+-.+.+++-.+++++.  +.+..    ...+|.-.+.++++++..
T Consensus       110 ~~~~~~~~~~~P~l~i~g--~Y~~~g~i~~~pi~g~G~~~~~l~~~~~~~~--~~~~~----~~~~g~~~l~i~~~~~~~  181 (248)
T PF06585_consen  110 KKLKLNFDLTFPKLSIKG--KYEIDGKILLLPISGKGDFNITLENVRATGT--IKGEV----YKKNGKTYLRITNFKIDF  181 (248)
T ss_dssp             TTTEEEEEEEE-EEEEEE--EEEEEEEECCECCCTEEEEEEEEEEEEEEEE--EEEEE----EEETS-EEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEEEEEEE--EEEEeeeeeeeEEeccceEEEEeeeEEEEEE--EEEEE----eecCCccEEEEEEEEEEE
Confidence            233455555566666665  55544331 1123334444444433322222  22222    234566666666665544


Q ss_pred             EEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHH
Q psy4431         156 LFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTIS  230 (250)
Q Consensus       156 ~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~  230 (250)
                      ++.        +-.++++.+      +++ .-.++...  ++.+++.+..+++++++++.+.+...+.+.+.+++
T Consensus       182 ~~~--------~~~~~~~nl------~~g-~~~l~~~~--n~~in~~~~~~~~~~~p~i~~~~~~~i~~~~N~~l  239 (248)
T PF06585_consen  182 DLG--------NVKFDLENL------FNG-NKELSDFI--NKFINENWPELLNEVKPDIEEILSKIITDIINKIL  239 (248)
T ss_dssp             EEC--------EEEEEESHH------HHH-HHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             Eec--------eEEEEeecc------CCC-CHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            321        111222222      110 01112222  34555555556666666666555555555555444

Juvenile hormone (JH) has a profound effect on insects. It regulates embryogenesis, maintains the status quo of larva development and stimulates reproductive maturation in the adult forms. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph []. The crystal structure of the JHBP from Galleria mellonella (Wax moth) shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organisation of the major cavity and a disulphide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance [, ].; PDB: 3A1Z_D 3AOS_B 3AOT_A 2RQF_A 2RCK_A 3E8W_A 3E8T_A.

>KOG4160|consensus

Probab=94.46  E-value=2.5  Score=40.29  Aligned_cols=166  Identities=11%  Similarity=0.116  Sum_probs=103.4

Q ss_pred             CCceEeCceEEecCCCc-eeEEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeee
Q psy4431          63 LEPLNLPLVTLDSSGSQ-VVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGN  141 (250)
Q Consensus        63 ldPl~i~~~~i~~~~~~-~~~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~  141 (250)
                      +.|+.+|++.... ... .-++...+.++.+.-..-.. ..++.-+ +..+.+...--.+.+.|+|...+....+.    
T Consensus        54 ~~~~~~p~~~~~~-~~~~~g~~~~~~~~i~i~~~~~~s-~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----  126 (492)
T KOG4160|consen   54 LLRLTIPDIEGSM-KSSHIGGGRYTLSSIKILRFSVPS-SQLSLVP-QAGLSWSITNANISLSGRWKARTRFLALG----  126 (492)
T ss_pred             hccCCchhhhccc-ccceecceEEEecceeEEeccccc-cceeecC-CceEEEEEeeEEEEEeeeeEeEEEEEecC----
Confidence            4566666666544 222 22566667777665544333 2333344 56666666666788889988855554322    


Q ss_pred             eeeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHH
Q psy4431         142 GKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPL  221 (250)
Q Consensus       142 G~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~  221 (250)
                      |.+....++..+...+.......+|+  ..++.. .......+++.++.      ...+...+.+.|.+.+.+-..++-.
T Consensus       127 g~~~~~~~g~~~~~~~~~~~~~~~~~--~~v~~~-~C~~~~~~l~~~~~------~~~~~l~~~~~~~~~~~i~~~~~~~  197 (492)
T KOG4160|consen  127 GQVDASVKGMDIQINLSLGSDIGDGK--PAVSDS-SCSAAISDLHVQMG------SLASWLIQLFLNAISDNIRSVLESQ  197 (492)
T ss_pred             CeeEEEeecceEEEeeeeeccCCCCc--ceeeee-cceeEeeeeEeecC------CCcHHHHHHHHHHHHHHHHHHHhhh
Confidence            78888788755555555543334555  455555 55666666666555      3456777777777777777777777


Q ss_pred             HHHHHHHHHHHHHHHHhhccCcc
Q psy4431         222 VQDTVSTISYQLFKNVLDVYSVD  244 (250)
Q Consensus       222 i~~~~~~i~~~~~n~~~~~vp~~  244 (250)
                      +-+.+...+...++..+...|..
T Consensus       198 ~c~~~~~~~~~~~~~~l~~~~~~  220 (492)
T KOG4160|consen  198 ICKKIRASVNGDLNSFLQTLPVS  220 (492)
T ss_pred             hcHHHHhhhchhhhhhhccCCcc
Confidence            77777777777777777776654

>smart00700 JHBP Juvenile hormone binding protein domains in insects

Probab=89.77  E-value=11  Score=31.69  Aligned_cols=40  Identities=10%  Similarity=0.107  Sum_probs=27.4

Q ss_pred             HHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q psy4431         201 RSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDV  240 (250)
Q Consensus       201 ~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~  240 (250)
                      ..+++.+|+-..+-|+++...+...+.+.+..++-.++.+
T Consensus       173 ~~L~~~~n~~lNen~~~i~~e~~p~i~~~~~~~~~~~~n~  212 (225)
T smart00700      173 KDLNDAINKFLNENWKALINELLPAIVEKLESIFLDLVNK  212 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5567777777777777777777777777776666665544

The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
3e8t_A	220	Crystal Structure Of Epiphyas Postvittana Takeout 1		9e-11

>pdb|3E8T|A Chain A, Crystal Structure Of Epiphyas Postvittana Takeout 1 Length = 220

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 28  PCKRNSSDLNSCVIDIIKSLKPRFHQGXXXXXXXXXXXXXXXXVTLDSSGSQVVNFKANF 87
           P ++ + + ++C+    +   P F  G                   D SG Q        
Sbjct: 4   PVEKCNLEDSACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDLSGLQF-----TL 58
Query: 88  RNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGN 147
           +  KL G K   + +VK D K + + +  HL    +   Y   G++L+LPI G+G+    
Sbjct: 59  KEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLDAT-VKGHYTAGGRILILPITGDGQMKLK 117
Query: 148 FTDVEADVLFSGKFYEK----NHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRST 203
             ++   ++ S +  +     +H  F K   T  V     N++    NLFNGN+EL  + 
Sbjct: 118 LKNIHIHLVVSYEMEKDAEGVDHVIFKKYTVTFDVK---DNAQFGLTNLFNGNKELSDTM 174
Query: 204 NNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNV 237
             FLN NW+ VS E    V +  +    ++FKN+
Sbjct: 175 LTFLNQNWKQVSEEFGKPVMEAAAK---KIFKNI 205

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
3e8t_A	220	Takeout 1, takeout-like protein 1; transport prote	2e-52
2rqf_A	227	HJHBP, hemolymph juvenIle hormone binding protein;	2e-41
2rck_A	225	JuvenIle hormone binding protein; hemolymph, JHBP-	5e-38

>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A* Length = 220

 Score =  168 bits (427), Expect = 2e-52
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 9/223 (4%)

Query: 28  PCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANF 87
           P ++ + + ++C+    +   P F  GLP+  + +++ L+L     D S       +   
Sbjct: 4   PVEKCNLEDSACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDLS-----GLQFTL 58

Query: 88  RNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGN 147
           +  KL G K   + +VK D K + + +  HL    +   Y   G++L+LPI G+G+    
Sbjct: 59  KEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLD-ATVKGHYTAGGRILILPITGDGQMKLK 117

Query: 148 FTDVEADVLFSGKF-YEKNHKQFVKLDATPKVSIKL-GNSEMHFDNLFNGNEELGRSTNN 205
             ++   ++ S +   +      V       V+  +  N++    NLFNGN+EL  +   
Sbjct: 118 LKNIHIHLVVSYEMEKDAEGVDHVIFKKY-TVTFDVKDNAQFGLTNLFNGNKELSDTMLT 176

Query: 206 FLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP 248
           FLN NW+ VS E    V +  +   ++  K+ L    + ++  
Sbjct: 177 FLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLAKVPIAEIAN 219

>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A* Length = 227

 Score =  140 bits (354), Expect = 2e-41
 Identities = 32/228 (14%), Positives = 78/228 (34%), Gaps = 17/228 (7%)

Query: 19  AANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGS 78
            ++  + +KPCK        C+    +    +  +G+P+  I  ++PL +  + + +   
Sbjct: 1   GSDGDALLKPCKLGD---MQCLSSATEQFLEKTSKGIPQYDIWPIDPLVVTSLDVIAPSD 57

Query: 79  QVVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPI 138
                   F+N+ + G K   + D ++D K + + +          +D  + G +++   
Sbjct: 58  --AGIVIRFKNLNITGLKNQQISDFQMDTKAKTVLLKTK-------ADLHIVGDIVIELT 108

Query: 139 RGNGKCSGNFTDVEADVLFSGKFYE----KNHKQFVKLDATPKVSIKLGNSEMHFDNLFN 194
             +   +G +T     +      Y      N  Q  ++         +G  ++   +  +
Sbjct: 109 EQSKSFTGLYTADTNVIGAVRYGYNLKNDDNGVQHFEVQPETFTCESIGEPKITLSSDLS 168

Query: 195 GNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYS 242
              E   S NN L  + E +       +          +  N+     
Sbjct: 169 SALEK-DSGNNSLEPDMEPLKTLRQAAICKIAEACYISVVHNIRASAK 215

>2rck_A JuvenIle hormone binding protein; hemolymph, JHBP-fold; HET: NAG; 2.44A {Galleria mellonella} Length = 225

 Score =  131 bits (331), Expect = 5e-38
 Identities = 27/228 (11%), Positives = 70/228 (30%), Gaps = 17/228 (7%)

Query: 20  ANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQ 79
           + L    +PC  +  +   C+    +      +QG+PE  I  L+P+ +P +       +
Sbjct: 1   SKLNLSTEPCDVSDIE---CISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEK---SIE 54

Query: 80  VVNFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIR 139
            +N    + N+K+ G K   +    L    + ++            ++   GK+++   +
Sbjct: 55  KINLNVRYNNLKVTGFKNQKISHFTLVRDTKAVNFKTK-------VNFTAEGKLVIELPK 107

Query: 140 GNGKCSGNFTDVEADV----LFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNG 195
            +   +G  T   +             +    +  +           G   +   +    
Sbjct: 108 SSKTYTGEVTIEASAEGGAAYSYSVKTDDKGVEHYEAGPETVSCEIFGEPTLSVSSTLED 167

Query: 196 NEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSV 243
             +L         +  + ++          V T+      N+     +
Sbjct: 168 ALKLDSDFKKIFTEYGKQLTEGRKQTACRIVETVYAVSVHNIRAAARI 215

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3e8t_A	220	Takeout 1, takeout-like protein 1; transport prote	100.0
2rck_A	225	JuvenIle hormone binding protein; hemolymph, JHBP-	100.0
2rqf_A	227	HJHBP, hemolymph juvenIle hormone binding protein;	100.0
3uv1_A	196	DER F 7 allergen; super-roll; 2.00A {Dermatophagoi	99.32
1ewf_A	456	BPI, bactericidal/permeability-increasing protein;	98.04
2obd_A	476	Cholesteryl ester transfer protein; lipid transfer	97.86
3h4z_A	568	Maltose-binding periplasmic protein fused with Al	97.55
3e8t_A	220	Takeout 1, takeout-like protein 1; transport prote	90.07
2rqf_A	227	HJHBP, hemolymph juvenIle hormone binding protein;	80.49

>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A*

Probab=100.00  E-value=3.6e-58  Score=389.23  Aligned_cols=216  Identities=24%  Similarity=0.472  Sum_probs=209.0

Q ss_pred             CCCCCcccCCCCCCcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecCCCceeEEEEEEEeeEEEcccceEEE
Q psy4431          22 LPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLDVK  101 (250)
Q Consensus        22 ~p~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~~~~~~~~~~~l~n~~i~Gl~~~~i~  101 (250)
                      +|+ +++|+|+|   ++|+++++|+++|+|++|+||+|+||+||+.++++.++. +    +++++++|++++|+++++|+
T Consensus         2 lP~-i~~C~~~d---~~Ci~~~i~~~~~~l~~GiPelgip~ldPl~i~~~~i~~-~----~~~~~~~n~~i~Gls~~~i~   72 (220)
T 3e8t_A            2 VLP-VEKCNLED---SACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDL-S----GLQFTLKEGKLKGLKGAVID   72 (220)
T ss_dssp             ----CCCCBTTC---HHHHHHHHHHHHHHHHTCBGGGTBCCBTTEEECCEEEEE-T----TEEEEEEEEEEECGGGCEEE
T ss_pred             CCC-CcccCCCh---HHHHHHHHHHHHHHhcCCCcccCCCCCCceeeeeEEEec-C----cEEEEEEeeEEEcCCceEEE
Confidence            799 99999999   999999999999999999999999999999999999987 4    58999999999999999999


Q ss_pred             EEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEEEEEEEEe-CCeEEEEEEecCeEEE
Q psy4431         102 DVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEK-NHKQFVKLDATPKVSI  180 (250)
Q Consensus       102 ~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~~~~~~~~-~G~~yl~i~~~~~~~~  180 (250)
                      ++++|+++.++++++++ ++.++|+|+++|+++.+||.|+|+++++++|++++++++++++.+ +|++|++++++ ++++
T Consensus        73 ~~~~~~~~~~~~~~~~~-~l~~~g~Y~~~g~il~lpi~g~G~~~~~l~n~~~~~~~~~~~~~~~~G~~yl~i~~~-~~~~  150 (220)
T 3e8t_A           73 NVKWDLKKKNIEVDFHL-DATVKGHYTAGGRILILPITGDGQMKLKLKNIHIHLVVSYEMEKDAEGVDHVIFKKY-TVTF  150 (220)
T ss_dssp             EEEEETTTTEEEEEEEE-EEEEEEEEEEEEEETTEECCEEEEEEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEE-EEEE
T ss_pred             EEEEcCCCcEEEEEEEE-EEEEEEEEEEeeEEEEEEEecCccEEEEEeeeEEEEEEEEEEEEecCCCEEEEEEEE-EEEE
Confidence            99999999999999999 999999999999999999999999999999999999999999888 99999999999 9999


Q ss_pred             Ee-ceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccCccccCC
Q psy4431         181 KL-GNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVDQLLP  248 (250)
Q Consensus       181 ~~-~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~vp~~~lf~  248 (250)
                      ++ ++++++++|||+||++|++++|+|+|+||++++++++|.+++++++++++++|++|+++|++++|+
T Consensus       151 ~~~~~~~~~~~nLfng~~~L~~~~n~~iN~nw~~i~~e~~p~i~~~~~~~~~~i~n~if~~~p~~~lF~  219 (220)
T 3e8t_A          151 DVKDNAQFGLTNLFNGNKELSDTMLTFLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLAKVPIAEIAN  219 (220)
T ss_dssp             EEEEEEEEEESSBGGGCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHSB
T ss_pred             EECCcEEEEEEcCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc
Confidence            99 999999999999999999999999999999999999999999999999999999999999999996

>2rck_A JuvenIle hormone binding protein; hemolymph, JHBP-fold; HET: NAG; 2.44A {Galleria mellonella}

Probab=100.00  E-value=1e-46  Score=319.80  Aligned_cols=198  Identities=15%  Similarity=0.294  Sum_probs=189.0

Q ss_pred             ccCCCCCcccCCCCCCcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecCCCceeEEEEEEEeeEEEcccceE
Q psy4431          20 ANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLD   99 (250)
Q Consensus        20 ~~~p~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~~~~~~~~~~~l~n~~i~Gl~~~~   99 (250)
                      +++|+++++|+|+||+   |+++++|+++|++++|+||+|+||+||+.++++.+.+   ++++++++++|++++|+++++
T Consensus         1 ~~~p~~i~~C~~~dp~---Ci~~~i~~l~~~~~~GiPel~ip~ldPl~i~~~~i~~---g~~~~~~~~~n~~i~Gls~~~   74 (225)
T 2rck_A            1 SKLNLSTEPCDVSDIE---CISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEKSI---EKINLNVRYNNLKVTGFKNQK   74 (225)
T ss_dssp             CCSCCCCCCCCTTCHH---HHHHHHHHHHHHHTTCBGGGTBCCCSSEEEEEEEEEE---TTTTEEEEEEEEEEECGGGCE
T ss_pred             CCCCCCCCcCCCCChH---HHHHHHHHHHHHhcCCCcccCCCCcCceecCceEEEe---CceEEEEEEEeeEEEcCCCcE
Confidence            3789999999999974   9999999999999999999999999999999999987   456799999999999999999


Q ss_pred             EEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEE-EEeeee---eeeEEEEeeeEEEEEEEEEEEEe-CCeEEEEEEe
Q psy4431         100 VKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLV-LPIRGN---GKCSGNFTDVEADVLFSGKFYEK-NHKQFVKLDA  174 (250)
Q Consensus       100 i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~-~pI~g~---G~~~~~l~~~~~~~~~~~~~~~~-~G~~yl~i~~  174 (250)
                      |+++++|+++.++       ++.++|+|+++|+++. +|+.|+   |+++++++ +++.++++++.+++ +|++|+++++
T Consensus        75 I~~~~~d~~~~~~-------~l~~~g~Y~~~g~il~~lpi~g~~~~G~~~~~l~-~~~~~~~~~~~~~~~~G~~yl~v~~  146 (225)
T 2rck_A           75 ISHFTLVRDTKAV-------NFKTKVNFTAEGKLVIELPKSSKTYTGEVTIEAS-AEGGAAYSYSVKTDDKGVEHYEAGP  146 (225)
T ss_dssp             EEEEEEETTTTEE-------EEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEE-EEEEEEEEEEEECCSSSCCEEEECC
T ss_pred             EEEEEEecCCCEE-------EEEEEEEEEEeeEEEEEEEecccccccceEEEEE-EEEEEEEEEEEEEecCCeEEEEEEE
Confidence            9999999998887       7899999999999998 999999   99999999 99999999999888 9999999999


Q ss_pred             cCeEEEE-eceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccCcc
Q psy4431         175 TPKVSIK-LGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDVYSVD  244 (250)
Q Consensus       175 ~~~~~~~-~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~vp~~  244 (250)
                      + +++++ +|++++++          ++.+|+++|+||+  +++++|.+++.+++++++++|++|++++++
T Consensus       147 ~-~v~~~~ig~~~~~~----------~~~~n~~iN~nw~--~~~ikP~i~~~~~~~~~~i~N~if~~~~~~  204 (225)
T 2rck_A          147 E-TVSCEIFGEPTLSV----------SSTLEDALKLDSD--FKKIFTEYGKQLTEGRKQTACRIVETVYAV  204 (225)
T ss_dssp             C-EEEEEECSCCEEEE----------CHHHHHHHHTCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             E-EEEEEEcCcEEEEH----------HHHHHHHHHhCcc--hhhhhHHHHHHHHHHHHHHHHHHHHhCcHh
Confidence            9 99997 99999999          6899999999999  999999999999999999999999999886

>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*

Probab=100.00  E-value=4.2e-40  Score=279.38  Aligned_cols=215  Identities=14%  Similarity=0.285  Sum_probs=185.1

Q ss_pred             ccCCCCCcccCCCCCCcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecCCCceeEEEEEEEeeEEEcccceE
Q psy4431          20 ANLPSYIKPCKRNSSDLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSSGSQVVNFKANFRNMKLHGAKTLD   99 (250)
Q Consensus        20 ~~~p~~i~~C~~~dp~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~~~~~~~~~~~l~n~~i~Gl~~~~   99 (250)
                      .+.|+++++|+|+|   .+|+++++|+++|++++|+||+||||+||+.++++.+.+ + ++++++++++|++++|+++++
T Consensus         2 ~~~~~~i~~C~r~d---~~Ci~~~i~~~~~~l~~GiPel~ip~ldPl~i~~~~i~~-~-~~~~~~~~~~n~~i~Gls~~~   76 (227)
T 2rqf_A            2 SDGDALLKPCKLGD---MQCLSSATEQFLEKTSKGIPQYDIWPIDPLVVTSLDVIA-P-SDAGIVIRFKNLNITGLKNQQ   76 (227)
T ss_dssp             CCCSCSCCCBCTTC---HHHHHHHHHHHHHHHTTCBTTTTBCCCSSEEESCEEEEE-T-TTSCEEEEEEEEEEESCTTCE
T ss_pred             CCCCCCCCcCCCCC---hHHHHHHHHHHHHHhcCCCcccCCCCCCcEecccEEEEc-C-CceEEEEEEEEeEEEcccceE
Confidence            47899999999999   589999999999999999999999999999999999998 5 578899999999999999999


Q ss_pred             EEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEE-EEeee---eeeeEEEEeeeEEEEEEEEEEE-EeCCeEEEEEEe
Q psy4431         100 VKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLV-LPIRG---NGKCSGNFTDVEADVLFSGKFY-EKNHKQFVKLDA  174 (250)
Q Consensus       100 i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~-~pI~g---~G~~~~~l~~~~~~~~~~~~~~-~~~G~~yl~i~~  174 (250)
                      |+++++|+++.++++       .+.|+|+++|+++. +|+.|   +|.++++++ ++++++++++.+ .++|++|+++++
T Consensus        77 I~~~~~d~~~~~~~l-------~~~~~y~i~G~y~l~lp~~~g~~~G~~~itl~-v~~~~~~~~~~~~~~~G~~yl~i~~  148 (227)
T 2rqf_A           77 ISDFQMDTKAKTVLL-------KTKADLHIVGDIVIELTEQSKSFTGLYTADTN-VIGAVRYGYNLKNDDNGVQHFEVQP  148 (227)
T ss_dssp             EEEEEEETTTTEEEE-------EEEEEEEEEEEEEEEETTTTEEEEEEEEEEEE-EEEEEEEEEEEEECSSSCEEEEECC
T ss_pred             EEEEEEccCCcEEEE-------EEEEEEEEEEEEEEEEecCCCceEEEEEEEEE-EEEEEEEEEEEEEccCCeEEEEEEE
Confidence            999999999999864       45568888888876 89876   688888888 999999988886 469999999999


Q ss_pred             cCeE-EEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHH---HHhhccCccccCCC
Q psy4431         175 TPKV-SIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFK---NVLDVYSVDQLLPE  249 (250)
Q Consensus       175 ~~~~-~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n---~~~~~vp~~~lf~~  249 (250)
                      + ++ ...+|+++++++++++ +..+.+.+|+++..+|+...+..++.|.+.++.++.+++|   ..|..+|.+.+|.+
T Consensus       149 ~-~v~~~~ig~~~~~l~~~l~-~~~~~d~~n~~~~~~y~~~~~~~~~~i~~ive~~~~~v~~~~~~~~~~~p~~~~~~~  225 (227)
T 2rqf_A          149 E-TFTCESIGEPKITLSSDLS-SALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISVVHNIRASAKILPASSFFEN  225 (227)
T ss_dssp             C-EEEEEECSSCEEEECHHHH-HHHHHHHTCSSCCTTSSSHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHSCSTTTBSC
T ss_pred             E-EEEeEEeccEEEEcchhhh-hhhhhchhHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhhc
Confidence            9 99 7789999999997764 3344444444444444556677899999999999999988   99999999999864

>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}

Probab=99.32  E-value=1.1e-10  Score=96.31  Aligned_cols=178  Identities=12%  Similarity=0.163  Sum_probs=117.4

Q ss_pred             CcchHHHHHHHHHhhhhcCCCCCCCCCCCCceEeCceEEecC-CCce--eEEEEEEEeeEEEcccceE-EEEEEEccCCc
Q psy4431          35 DLNSCVIDIIKSLKPRFHQGLPELKIPILEPLNLPLVTLDSS-GSQV--VNFKANFRNMKLHGAKTLD-VKDVKLDYKGR  110 (250)
Q Consensus        35 ~l~~Cl~~~~~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~-~~~~--~~~~~~l~n~~i~Gl~~~~-i~~~~~d~~~~  110 (250)
                      ++|+++-+.+..+++.          +.+||+.+|+...... ..+.  ...++.++|.+++|||++. .-++.+..+..
T Consensus        11 ~~N~~vD~~l~~~~~~----------~~lDP~~lpd~~~~f~~~~g~~~~~g~~~l~ng~l~GLSs~~R~Gd~~~~~~~~   80 (196)
T 3uv1_A           11 EINKAIDDAIAAIEQS----------ETIDPMKVPDHADKFERHVGILDFKGELAMRNIEARGLKQMKRQGDANVKGEEG   80 (196)
T ss_dssp             HHHHHHHHHHHHHHTS----------SSSSSEEECCEEEEEEEECSSSEEEEEEEEEEEEEECGGGEEESSSCEEEEETT
T ss_pred             HHHHHHHHHHHHHHhh----------cCCCCeecCccccccccccceEeeEEEEEEEEEEEEccccEEEccceEEEEcCC
Confidence            3456666666665542          3479999999866541 2232  3566889999999999985 44444444444


Q ss_pred             --EEEEEEEeeeEEEEEEEEEeeeEEEEEeeeeeeeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEE
Q psy4431         111 --KLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMH  188 (250)
Q Consensus       111 --~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~  188 (250)
                        ++.+++-+..+.++++|+...++.  .+.+.|...+++.++++.+.+...   .+|  +++++++ +++ ++++++++
T Consensus        81 ~~~~~~~vg~~~~~v~~~y~~~~~~~--~~~~~g~v~~~i~~~~v~~~~~~~---~~~--~~~l~~f-~i~-~l~~i~v~  151 (196)
T 3uv1_A           81 IVKAHLLIGVHDDIVSMEYDLAYKLG--DLHPTTHVISDIQDFVVALSLEIP---DEG--NITMTSF-EVR-QFANVVNH  151 (196)
T ss_dssp             EEEEEEEEEESSSCEEEEEEEEEEBT--TBCCEEEEEEEEETCEEEEEEEEE---SSS--CCEEEEE-EEC-CCSEEEEE
T ss_pred             eEEEEEEeeeceeEEEEEEEEEEEEc--ccCCcEEEEEEEEEEEEEEEEEEc---CCC--ceeecee-cee-eecceEEE
Confidence              444555555678888888776553  357889999999999888777654   355  3788888 666 79999999


Q ss_pred             ecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy4431         189 FDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFK  235 (250)
Q Consensus       189 l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n  235 (250)
                      ++|+=    .++..++-+.|--...+-..+++.+++.+.+.+++-++
T Consensus       152 ~~Glg----~ld~l~~~i~n~~~~l~~~~I~~~ie~~v~~~i~~~l~  194 (196)
T 3uv1_A          152 IGGLS----ILDPIFGVLSDVLTAIFQDTVRKEMTKVLAPAFKRELE  194 (196)
T ss_dssp             ETTCC----TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99872    34445555555444445555555555555555555443

>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*

Probab=98.04  E-value=0.00097  Score=61.10  Aligned_cols=165  Identities=8%  Similarity=0.106  Sum_probs=101.1

Q ss_pred             CceEeCceEEecCCCcee-EEEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeeee
Q psy4431          64 EPLNLPLVTLDSSGSQVV-NFKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGNG  142 (250)
Q Consensus        64 dPl~i~~~~i~~~~~~~~-~~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~G  142 (250)
                      .++.+|+++-.. ....+ .+...++|++++.++--.. ++++-+ ...+.+.+.--.+.++|+|+....+    +.-.|
T Consensus        30 ~~~~iPdi~~~~-~~~~~g~~~~~ls~i~I~~~~~~~~-~l~~~p-~~gi~l~i~~~~~~l~~~~~~~~~~----i~~~G  102 (456)
T 1ewf_A           30 KRIKIPDYSDSF-KIKHLGKGHYSFYSMDIREFQLPSS-QISMVP-NVGLKFSISNANIKISGKWKAQKRF----LKMSG  102 (456)
T ss_dssp             TTCCCCCEEEEC-SCSSSSSCEEEEEEEEEEEEECCCE-EEEEET-TTEEEEEEEEEEEEEEEEEEEEETT----EEEEE
T ss_pred             hcCCCCCccCce-eccccceEEEEEEEEEEEEEecCCc-eEEECC-CCEEEEEEeCCcEEEEEEEEEEEEE----Eeeee
Confidence            345566666543 11100 2455666777666554332 444432 3455555555567788887776532    46788


Q ss_pred             eeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHHH
Q psy4431         143 KCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPLV  222 (250)
Q Consensus       143 ~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i  222 (250)
                      .+++.+.++.+++.+..+....+|+  .++... +....++++++++.+   |  .++...|-|.+.--..+-+.++..+
T Consensus       103 ~~~~~v~~v~i~~~~~l~~~~~~G~--~~v~~~-~C~~~~~~~~i~~~g---~--~~~~l~n~f~~~i~~~i~~~l~~~i  174 (456)
T 1ewf_A          103 NFDLSIEGMSISADLKLGSNPTSGK--PTITCS-SCSSHINSVHVHISK---S--KVGWLIQLFHKKIESALRNKMNSQV  174 (456)
T ss_dssp             EEEEEEEEEEEEEEEEEEEETTTTE--EEEEEE-EEEEECCEEEEECSC---G--GGHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEEEEEeeEEEEEEEEEeecCCCCc--eEEEEe-cCceEeceEEEEEeC---C--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988888875322887  555555 667788999998853   2  1344444444333344555556666


Q ss_pred             HHHHHHHHHHHHHHHhhccCc
Q psy4431         223 QDTVSTISYQLFKNVLDVYSV  243 (250)
Q Consensus       223 ~~~~~~i~~~~~n~~~~~vp~  243 (250)
                      -+.+...+...+|+.+.++|.
T Consensus       175 C~~i~~~v~~~ln~~L~~lp~  195 (456)
T 1ewf_A          175 CEKVTNSVSSELQPYFQTLPV  195 (456)
T ss_dssp             HHHHHHHHHHTHHHHHTTSCS
T ss_pred             HHHHHHHHHHHHHHHHhhCCc
Confidence            666666666668999998885

>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}

Probab=97.86  E-value=0.0013  Score=60.85  Aligned_cols=144  Identities=9%  Similarity=0.109  Sum_probs=87.0

Q ss_pred             EEEEEEeeEEEcccceEEEEEEEccCCcEEEEEEEeeeEEEEEEEEEeee--EEEEEeeeeeeeEEEEe-eeEEEEEEEE
Q psy4431          83 FKANFRNMKLHGAKTLDVKDVKLDYKGRKLSMVLHLPKVYMTSDYDMNGK--VLVLPIRGNGKCSGNFT-DVEADVLFSG  159 (250)
Q Consensus        83 ~~~~l~n~~i~Gl~~~~i~~~~~d~~~~~~~~~~~~P~i~~~g~Y~~~g~--il~~pI~g~G~~~~~l~-~~~~~~~~~~  159 (250)
                      +...++|+++..++--. .++++. ....+.+.+.--.+.++|+|++.-.  -+   ++..|.+++.++ ++.+++.+..
T Consensus        55 ~~y~ls~ikI~~~~~~~-~~l~~~-p~~gi~l~i~~~~i~l~g~w~~~~~~~~~---i~~~G~~~~~v~~gv~i~~~~~L  129 (476)
T 2obd_A           55 VKYGLHNIQISHLSIAS-SQVELV-EAKSIDVSIQDVSVVFKGTLKYGYTTAWW---LGIDQSIDFEIDSAIDLQINTQL  129 (476)
T ss_dssp             EEEEEEEEEEEEEEEEE-EEEEEE-TTTEEEEEEEEEEEEEEEEEEEEESSCGG---GCSCEEEEEEEEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEEEEEcCC-ceEEEC-CCCeEEEEEeCCEEEEEEEEEEEeccCcE---EecceEEEEEEecCEEEEEEEEE
Confidence            45556666666554211 122232 2445566666667888898888653  11   678899999999 9999999888


Q ss_pred             EEEEeCCeEEEEEEecCeEEEEeceEEEEecccC-CCChHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q psy4431         160 KFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLF-NGNEELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVL  238 (250)
Q Consensus       160 ~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf-~Gn~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~  238 (250)
                      .  +.+|+  +++... +....++++++++.+-. +  .-+.+...+++.   +.+-+.++..+-+.+...+.. +|..+
T Consensus       130 ~--~~~G~--~~v~~~-~C~~~i~~v~v~~~g~~lp--s~l~n~f~~~i~---~~i~~~l~~~iC~~i~~~i~~-ln~~L  198 (476)
T 2obd_A          130 T--ADSGR--VRTDAP-DCYLSFHKLLLHLQGEREP--GWIKQLFTNFIS---FTLKLVLKGQICKEINVISNI-MADFV  198 (476)
T ss_dssp             E--EETTE--EEEEEE-EEEEEEEEEEEEETTCCCC--SSHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             e--cCCCc--EEEEEc-ccEEEeeeEEEEEECCcch--hHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence            8  47887  666666 77888999999998521 0  234444444433   333333333333334444433 45555


Q ss_pred             hccC
Q psy4431         239 DVYS  242 (250)
Q Consensus       239 ~~vp  242 (250)
                      .++|
T Consensus       199 ~tlp  202 (476)
T 2obd_A          199 QTRA  202 (476)
T ss_dssp             HHHH
T ss_pred             hhCc
Confidence            5554

>3h4z_A Maltose-binding periplasmic protein fused with Al DERP7; MBP fusion, AHA1/BPI domain-like, super roll, sugar T transport, allergen; HET: GLC; 2.35A {Escherichia coli}

Probab=97.55  E-value=0.0047  Score=58.19  Aligned_cols=165  Identities=15%  Similarity=0.174  Sum_probs=100.9

Q ss_pred             CCCCCCceEeCceEEecC-C--CceeEEEEEEEeeEEEcccceEEE-EEEEccCCcEEEEEEEeeeEE--EEEEEEEeee
Q psy4431          59 KIPILEPLNLPLVTLDSS-G--SQVVNFKANFRNMKLHGAKTLDVK-DVKLDYKGRKLSMVLHLPKVY--MTSDYDMNGK  132 (250)
Q Consensus        59 gip~ldPl~i~~~~i~~~-~--~~~~~~~~~l~n~~i~Gl~~~~i~-~~~~d~~~~~~~~~~~~P~i~--~~g~Y~~~g~  132 (250)
                      -.|.+||+.++....... .  --.....+.++|.+++||+..+=. +.-...+...+++.+++--..  +.-.|++...
T Consensus       395 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (568)
T 3h4z_A          395 KSETFDPMKVPDHSDKFERHIGIIDLKGELDMRNIQVRGLKQMKRVGDANVKSEDGVVKAHLLVGVHDDVVSMEYDLAYK  474 (568)
T ss_dssp             HCSTTTTEEECCEEEEEECCCSSSCCEEEEEEEEEEEECGGGCEECSCCEEEEETTEEEEEEEEEECSSCEEEEEEEEEC
T ss_pred             CCCCcCCccCcchhhhhcCCceeeeecceeEeeccEEEeeeehhccccceeeccCcEEEEEeecccccccccceeEEEEE
Confidence            468899999998554431 1  123468899999999999987622 333444556666666654222  5556776655


Q ss_pred             EEEEEeeeeeeeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHH
Q psy4431         133 VLVLPIRGNGKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWE  212 (250)
Q Consensus       133 il~~pI~g~G~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~  212 (250)
                      +..  ..-.|.....+...++...  ++. ..+|  |+.++++ ++. +++++.+++.++-    -+..+    +|.-..
T Consensus       475 ~~~--~~~~~~~~~~~~~~~~~~~--~~~-~~~~--~~~~~~~-~~~-~~~~~~~~~~~~~----~~~~~----~~~~~~  537 (568)
T 3h4z_A          475 LGD--LHPNTHVISDIQDFVVELS--LEV-SEEG--NMTLTSF-EVR-QFANVVNHIGGLS----ILDPI----FAVLSD  537 (568)
T ss_dssp             BTT--BCCEEEEEEEESSEEEEEE--EEE-CTTC--CEEEEEE-EEC-CCSCEEEEETTCC----TTSHH----HHHHHH
T ss_pred             eec--cCCCceEEeEeeeEEEEEE--EEe-eccc--eEEeeee-eEE-EecceeEEecCcc----hHHHH----HHHHHH
Confidence            421  1223334444444444333  333 3455  6888877 443 5999999998763    33343    444445


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q psy4431         213 LVSAEVIPLVQDTVSTISYQLFKNVLDV  240 (250)
Q Consensus       213 ~i~~~~~p~i~~~~~~i~~~~~n~~~~~  240 (250)
                      .+.+-++..|...+++.+++.+.+.+.+
T Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  565 (568)
T 3h4z_A          538 VLTAIFQDTVRAEMTKVLAPAFKKELER  565 (568)
T ss_dssp             HHHHTTTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5666777777777777777777666554

>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A*

Probab=90.07  E-value=6.5  Score=31.74  Aligned_cols=35  Identities=6%  Similarity=-0.055  Sum_probs=17.8

Q ss_pred             hHHHHHHHHHHhhcHHHHHHHhhHHHHHHHHHHHH
Q psy4431         197 EELGRSTNNFLNDNWELVSAEVIPLVQDTVSTISY  231 (250)
Q Consensus       197 ~~L~~~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~  231 (250)
                      ..+++....++++..+.+.+.+...+...+.+++.
T Consensus       176 ~~iN~nw~~i~~e~~p~i~~~~~~~~~~i~n~if~  210 (220)
T 3e8t_A          176 TFLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLA  210 (220)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44445555555555555555555555554444443

>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*

Probab=80.49  E-value=17  Score=29.63  Aligned_cols=61  Identities=11%  Similarity=0.116  Sum_probs=48.0

Q ss_pred             EEeceEEE---Eeccc-CCCChHHHH-HHHHHHhhcHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q psy4431         180 IKLGNSEM---HFDNL-FNGNEELGR-STNNFLNDNWELVSAEVIPLVQDTVSTISYQLFKNVLDV  240 (250)
Q Consensus       180 ~~~~~~~~---~l~nl-f~Gn~~L~~-~~n~~iN~n~~~i~~~~~p~i~~~~~~i~~~~~n~~~~~  240 (250)
                      +++.++++   ++.++ +.=+.+|++ .+++..|+.|+..++...+...+.+.+++...+-.++..
T Consensus       144 l~i~~~~v~~~~ig~~~~~l~~~l~~~~~~d~~n~~~~~~y~~~~~~~~~~i~~ive~~~~~v~~~  209 (227)
T 2rqf_A          144 FEVQPETFTCESIGEPKITLSSDLSSALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISVVHN  209 (227)
T ss_dssp             EEECCCEEEEEECSSCEEEECHHHHHHHHHHHTCSSCCTTSSSHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEEeEEeccEEEEcchhhhhhhhhchhHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHH
Confidence            56676666   33333 222578887 679999999999999999999999999999999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1ewfa1	217	Bactericidal permeability-increasing protein, BPI	98.67

>d1ewfa1 d.83.1.1 (A:1-217) Bactericidal permeability-increasing protein, BPI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aha1/BPI domain-like
superfamily: Bactericidal permeability-increasing protein, BPI
family: Bactericidal permeability-increasing protein, BPI
domain: Bactericidal permeability-increasing protein, BPI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.8e-06  Score=67.87  Aligned_cols=165  Identities=8%  Similarity=0.118  Sum_probs=112.7

Q ss_pred             CceEeCceEEecCCCcee-EEEEEEEeeEEEcccceEEEEEEEcc-CCcEEEEEEEeeeEEEEEEEEEeeeEEEEEeeee
Q psy4431          64 EPLNLPLVTLDSSGSQVV-NFKANFRNMKLHGAKTLDVKDVKLDY-KGRKLSMVLHLPKVYMTSDYDMNGKVLVLPIRGN  141 (250)
Q Consensus        64 dPl~i~~~~i~~~~~~~~-~~~~~l~n~~i~Gl~~~~i~~~~~d~-~~~~~~~~~~~P~i~~~g~Y~~~g~il~~pI~g~  141 (250)
                      .++.+|++.-.. .-+.+ .++..++|+++..++   +.+.++.+ ....+.+.++=-.+.++|+|+..-.+  +  .-.
T Consensus        30 ~~i~iPdi~~~~-~i~~~G~v~y~ls~i~I~~~~---~~~s~l~~~p~~gi~~~is~~~~~l~g~w~~~~~~--i--~~~  101 (217)
T d1ewfa1          30 KRIKIPDYSDSF-KIKHLGKGHYSFYSMDIREFQ---LPSSQISMVPNVGLKFSISNANIKISGKWKAQKRF--L--KMS  101 (217)
T ss_dssp             TTCCCCCEEEEC-SCSSSSSCEEEEEEEEEEEEE---CCCEEEEEETTTEEEEEEEEEEEEEEEEEEEEETT--E--EEE
T ss_pred             hcCCCCCccCcc-cccccceEEEEEEeeEEEEEe---cCCceeEecCCCeEEEEEecCeEEEEEEEEEEEEE--E--EEe
Confidence            455666666554 21111 477889999987654   44444443 24567777776678999999876543  3  456


Q ss_pred             eeeEEEEeeeEEEEEEEEEEEEeCCeEEEEEEecCeEEEEeceEEEEecccCCCChHHHHHHHHHHhhcHHHHHHHhhHH
Q psy4431         142 GKCSGNFTDVEADVLFSGKFYEKNHKQFVKLDATPKVSIKLGNSEMHFDNLFNGNEELGRSTNNFLNDNWELVSAEVIPL  221 (250)
Q Consensus       142 G~~~~~l~~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~l~nlf~Gn~~L~~~~n~~iN~n~~~i~~~~~p~  221 (250)
                      |.+++.++++.+++.+.+.....+|+  +++... +.+..++++++++.+   |  .++...|-|.+.--..+-+.++..
T Consensus       102 G~~~~~v~~~~i~~~~~l~~d~~~G~--~~v~~~-~C~~~i~~v~i~~~g---g--~~swl~n~f~~~i~~~ir~~l~~~  173 (217)
T d1ewfa1         102 GNFDLSIEGMSISADLKLGSNPTSGK--PTITCS-SCSSHINSVHVHISK---S--KVGWLIQLFHKKIESALRNKMNSQ  173 (217)
T ss_dssp             EEEEEEEEEEEEEEEEEEEEETTTTE--EEEEEE-EEEEECCEEEEECSC---G--GGHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             eEEEEEEEEEEEEEEEEEEeeCCCCc--EEEEEc-cCceEeeeEEEEECC---C--chHHHHHHHHHHHHHHHHHHHHHH
Confidence            67777788888888888776556787  666666 778889999999974   2  235555655555566666667777


Q ss_pred             HHHHHHHHHHHHHHHHhhccCcc
Q psy4431         222 VQDTVSTISYQLFKNVLDVYSVD  244 (250)
Q Consensus       222 i~~~~~~i~~~~~n~~~~~vp~~  244 (250)
                      |-+.+.+.+...+|+.++++|..
T Consensus       174 iC~~i~~~i~~~ln~~L~~lp~~  196 (217)
T d1ewfa1         174 VCEKVTNSVSSELQPYFQTLPVM  196 (217)
T ss_dssp             HHHHHHHHHHHTHHHHHTTSCSE
T ss_pred             HhHHHHHHHHHHHHHHHHhCCee
Confidence            77777777777789999998854