Psyllid ID: psy4436
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 171 | 2.2.26 [Sep-21-2011] | |||||||
| Q86V88 | 176 | Magnesium-dependent phosp | yes | N/A | 0.918 | 0.892 | 0.506 | 2e-39 | |
| Q9D967 | 164 | Magnesium-dependent phosp | yes | N/A | 0.918 | 0.957 | 0.512 | 8e-39 | |
| O94279 | 172 | Putative magnesium-depend | no | N/A | 0.777 | 0.773 | 0.369 | 1e-18 | |
| P40081 | 178 | Putative magnesium-depend | yes | N/A | 0.795 | 0.764 | 0.287 | 5e-09 |
| >sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF K D V D G ++ Y +VP +LK L+
Sbjct: 1 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
AAASRT+E+ A+QL++LF+ ++F H+EI+PG K THF L++ TGI + M+F
Sbjct: 61 LGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE RN DVS LGVTCIH+++GM+ L +GL+ +A
Sbjct: 121 FDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFA 158
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8 |
| >sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP +L L+
Sbjct: 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L TG+ + MVF
Sbjct: 61 LGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE RN DV LGVTCIH++DGMS L +GL+ +A
Sbjct: 121 FDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFA 158
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
| >sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.31 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK---VLDAGGAIIKYYRDVPAILKYLKQ 70
+FPK VFDLD+TLWP + V PFK + ++D G I +Y D+ IL+ L+
Sbjct: 6 EFPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRN 65
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWN---------QHFDHKEIFPGQKTTHFANLKKAT 121
+ ASRT A Q ++L + F + + +PG K HF + +
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNES 125
Query: 122 GIEYKDMVFFDDEERNSHDVSPLGVT 147
GI+Y++MVFFDDE RN +V LGVT
Sbjct: 126 GIDYREMVFFDDESRN-REVERLGVT 150
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Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
| >sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1 SV=1 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK------VLDAGGAIIKYYRDVPAILKYL 68
+P +A FDLD+T+WP + + PFK + ++ G + Y+D+P IL L
Sbjct: 4 YPDVAAFDLDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDL 63
Query: 69 KQNNCLVAAASRT------TEMLRAHQ---------LVDLFNWNQHFDHKEIFPGQKTTH 113
K N + ASRT E+L+ + L +LF+ Q + +I G
Sbjct: 64 KDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKI--GHLRDG 121
Query: 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153
+L + ++ K + FDDE RN +V GV ++V+D
Sbjct: 122 LKDLYNTSDLKSKKICLFDDESRNK-EVEKYGVKFVYVRD 160
|
Magnesium-dependent phosphatase which may act as a tyrosine phosphatase. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 171 | ||||||
| 350406224 | 159 | PREDICTED: magnesium-dependent phosphata | 0.888 | 0.955 | 0.546 | 1e-43 | |
| 383855172 | 155 | PREDICTED: magnesium-dependent phosphata | 0.906 | 1.0 | 0.544 | 2e-42 | |
| 156555324 | 162 | PREDICTED: magnesium-dependent phosphata | 0.923 | 0.975 | 0.503 | 2e-41 | |
| 340716330 | 147 | PREDICTED: magnesium-dependent phosphata | 0.812 | 0.945 | 0.561 | 1e-40 | |
| 443698977 | 166 | hypothetical protein CAPTEDRAFT_148534 [ | 0.906 | 0.933 | 0.522 | 6e-40 | |
| 417396395 | 164 | Hypothetical protein [Desmodus rotundus] | 0.918 | 0.957 | 0.506 | 5e-39 | |
| 348577389 | 164 | PREDICTED: magnesium-dependent phosphata | 0.918 | 0.957 | 0.506 | 2e-38 | |
| 254839198 | 187 | Chain A, Crystal Structure Of Human Magn | 0.923 | 0.844 | 0.509 | 3e-38 | |
| 157823059 | 164 | magnesium-dependent phosphatase 1 [Rattu | 0.918 | 0.957 | 0.512 | 4e-38 | |
| 345804214 | 164 | PREDICTED: magnesium-dependent phosphata | 0.918 | 0.957 | 0.5 | 6e-38 |
| >gi|350406224|ref|XP_003487698.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 119/152 (78%)
Query: 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 75
PK+ +FDLD+TLWPF V VIPPFKK G+ V+D+ G II+YY++VP +LK+L + +
Sbjct: 8 PKIIIFDLDYTLWPFWVDTHVIPPFKKKGNDVVDSRGQIIQYYKEVPDVLKHLYEAGYEL 67
Query: 76 AAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135
ASRT+E+ A QL++LFNW+++ +KEI+PG K THF+ ++KA+GI+YKDMVFFDDE+
Sbjct: 68 GVASRTSEIQGAKQLLNLFNWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDED 127
Query: 136 RNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQW 167
RN DV LGVTCI VK+G++H+++ LK++
Sbjct: 128 RNIVDVGKLGVTCIFVKNGVNHALVESLLKKF 159
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383855172|ref|XP_003703091.1| PREDICTED: magnesium-dependent phosphatase 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 118/156 (75%), Gaps = 1/156 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN 71
+ K PKL VFDLD+TLWPF V V PPFKK G+ V+DA G II+YY++VP ILK L +
Sbjct: 1 MNKKPKLLVFDLDYTLWPFWVDTHVTPPFKKKGNDVVDAHGQIIRYYKEVPDILKRLSEE 60
Query: 72 NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 131
L ASRT+E+ A+QL+ LFNW+++F +KEI+PG K +HF+ ++KA+GI+YKDM+FF
Sbjct: 61 YEL-GVASRTSEIQGANQLLKLFNWDKYFKYKEIYPGCKVSHFSKIQKASGIDYKDMIFF 119
Query: 132 DDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQW 167
DDE RN DV LGVTCI V++G++++V+ K++
Sbjct: 120 DDEHRNIVDVGKLGVTCILVQNGVTNTVIENAFKKF 155
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156555324|ref|XP_001603927.1| PREDICTED: magnesium-dependent phosphatase 1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 114/159 (71%), Gaps = 1/159 (0%)
Query: 13 KKFPKLAVFDLDHTLWPFHVYIDVIPPFKK-IGDKVLDAGGAIIKYYRDVPAILKYLKQN 71
+K PK+ VFDLD+TLWPF V V PPF+K +K++DA G ++YY P I K L +
Sbjct: 3 EKKPKVVVFDLDYTLWPFWVDTHVTPPFRKGQNNKIVDAHGQTVRYYPHSPEIFKQLSEE 62
Query: 72 NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 131
+ ASRT+E+ A+QL+DLF WN++ +KEI+PG KTTHF+ +K A+G+EYKDM+FF
Sbjct: 63 GYEIGIASRTSEIRGANQLLDLFGWNKYIKYKEIYPGTKTTHFSKIKNASGVEYKDMIFF 122
Query: 132 DDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170
DDE+RN D++ +GV I V++G++H V+ GL Q+A K
Sbjct: 123 DDEQRNISDLTEVGVLSILVRNGVTHKVIQDGLNQFAKK 161
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340716330|ref|XP_003396652.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 108/139 (77%)
Query: 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 75
PK+ +FDLD+TLWPF V VIPPFKK G+ V+D+ G II+YY++VP +LK+L + +
Sbjct: 8 PKIIIFDLDYTLWPFWVDTHVIPPFKKKGNNVVDSRGQIIQYYKEVPDVLKHLYEEGYEL 67
Query: 76 AAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135
ASRT+E+ A QL++LF+W+++ +KEI+PG K THF+ ++KA+GI+YKDMVFFDDE+
Sbjct: 68 GVASRTSEIQGAKQLLNLFDWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDED 127
Query: 136 RNSHDVSPLGVTCIHVKDG 154
RN DV LGVTCI VK+
Sbjct: 128 RNIVDVGKLGVTCIFVKNA 146
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|443698977|gb|ELT98686.1| hypothetical protein CAPTEDRAFT_148534 [Capitella teleta] | Back alignment and taxonomy information |
|---|
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 110/157 (70%), Gaps = 2/157 (1%)
Query: 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNNCL 74
PK VFDLD T+WP+H+ + PPF+K D K++D G +K + DVP ILK LK + +
Sbjct: 10 PKFIVFDLDCTMWPWHLDMSD-PPFRKARDGKIVDRLGHKVKGFPDVPQILKTLKSDGYI 68
Query: 75 VAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 134
+ AASRTTE+ HQL+DL W+++ +EI+PGQK THF L+K+TGI +KDM+FFDDE
Sbjct: 69 IGAASRTTELEAGHQLLDLLGWDEYISFREIYPGQKMTHFKALQKSTGIAFKDMLFFDDE 128
Query: 135 ERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASKN 171
RN DVS LGVTC + +DGMS+ VL KG ++ N
Sbjct: 129 YRNIRDVSKLGVTCFYCQDGMSNEVLKKGFALFSKNN 165
|
Source: Capitella teleta Species: Capitella teleta Genus: Capitella Family: Capitellidae Order: Capitellida Class: Polychaeta Phylum: Annelida Superkingdom: Eukaryota |
| >gi|417396395|gb|JAA45231.1| Hypothetical protein [Desmodus rotundus] | Back alignment and taxonomy information |
|---|
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK-VLDAGGAIIKYYRDVPAILKYLKQ 70
+++ PKLAVFDLD+TLWPF V V PPF K D+ V D G I+ Y +VP +L ++
Sbjct: 1 MERLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDRTVRDRRGQTIRLYPEVPEVLNRFRR 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT E+ A+QL++LF+ +++F +EI+PG K THF L++ TG+ + M+F
Sbjct: 61 LGVPVAAASRTGEIEGANQLLELFDLDRYFVQREIYPGSKVTHFERLRQKTGVPFSQMLF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE+RN DVS LGVTCIHV++GMS +L +GL+ +A
Sbjct: 121 FDDEKRNIVDVSKLGVTCIHVQNGMSLQILTQGLETFA 158
|
Source: Desmodus rotundus Species: Desmodus rotundus Genus: Desmodus Family: Phyllostomidae Order: Chiroptera Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|348577389|ref|XP_003474467.1| PREDICTED: magnesium-dependent phosphatase 1-like [Cavia porcellus] | Back alignment and taxonomy information |
|---|
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVL-DAGGAIIKYYRDVPAILKYLKQ 70
+ K PKLAVFDLD+TLWPF V V PPF + D + D+ G ++ Y++VPA+L L+
Sbjct: 1 MAKLPKLAVFDLDYTLWPFWVDTHVDPPFHRSSDGAIRDSRGQSVRLYQEVPAVLDRLQG 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT E+ A+QL++LF ++F H+EI+PG K THF L + TG+ + M+F
Sbjct: 61 LGVPVAAASRTGEVEGANQLLELFGLVRYFVHREIYPGSKVTHFERLHQKTGVPFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE+RN DV+ LGVTC+HVK+GMS L +GL+ +A
Sbjct: 121 FDDEKRNIVDVTALGVTCVHVKNGMSLQTLTQGLEMFA 158
|
Source: Cavia porcellus Species: Cavia porcellus Genus: Cavia Family: Caviidae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|254839198|pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) | Back alignment and taxonomy information |
|---|
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 110/159 (69%), Gaps = 1/159 (0%)
Query: 11 SVKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLK 69
S+ + PKLAVFDLD+TLWPF V V PPF K D V D G ++ Y +VP +LK L+
Sbjct: 22 SMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQ 81
Query: 70 QNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMV 129
AAASRT+E+ A+QL++LF+ ++F H+EI+PG K THF L++ TGI + M+
Sbjct: 82 SLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMI 141
Query: 130 FFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FFDDE RN DVS LGVTCIH+++GM+ L +GL+ +A
Sbjct: 142 FFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFA 180
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|157823059|ref|NP_001099509.1| magnesium-dependent phosphatase 1 [Rattus norvegicus] gi|149063990|gb|EDM14260.1| similar to magnesium-dependent phosphatase-1 (predicted), isoform CRA_b [Rattus norvegicus] | Back alignment and taxonomy information |
|---|
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP IL L+
Sbjct: 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQS 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L+ TG+ + M+F
Sbjct: 61 LGVPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE RN DV LGVTCIH++DGMS +L +GL+ +A
Sbjct: 121 FDDENRNIIDVGKLGVTCIHIQDGMSLQMLTQGLETFA 158
|
Source: Rattus norvegicus Species: Rattus norvegicus Genus: Rattus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|345804214|ref|XP_537388.3| PREDICTED: magnesium-dependent phosphatase 1-like [Canis lupus familiaris] | Back alignment and taxonomy information |
|---|
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF + D V D G ++ Y +VP +L+ L+
Sbjct: 1 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHRSSDGAVRDRRGQAVRLYPEVPDVLQQLQD 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
+ VAAASRT E+ A+QL++LF +++F H+EI+PG K THF L++ TG+ + M+F
Sbjct: 61 LDVPVAAASRTGEIEGANQLLELFGLDRYFVHREIYPGSKVTHFERLQQKTGVGFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE+RN DVS LGVTCIHV++GM+ L +GL+ +A
Sbjct: 121 FDDEKRNIVDVSKLGVTCIHVQNGMNLQTLTQGLETFA 158
|
Source: Canis lupus familiaris Species: Canis lupus Genus: Canis Family: Canidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 171 | ||||||
| RGD|1311147 | 164 | Mdp1 "magnesium-dependent phos | 0.906 | 0.945 | 0.519 | 4.9e-37 | |
| UNIPROTKB|Q86V88 | 176 | MDP1 "Magnesium-dependent phos | 0.906 | 0.880 | 0.512 | 6.3e-37 | |
| UNIPROTKB|F1SGN7 | 164 | LOC100520440 "Uncharacterized | 0.918 | 0.957 | 0.493 | 6.3e-37 | |
| UNIPROTKB|F1MXF2 | 164 | MDP-1 "Uncharacterized protein | 0.883 | 0.920 | 0.526 | 1.7e-36 | |
| MGI|MGI:1915131 | 164 | Mdp1 "magnesium-dependent phos | 0.906 | 0.945 | 0.519 | 1.7e-36 | |
| UNIPROTKB|Q32PA3 | 127 | MDP-1 "Uncharacterized protein | 0.502 | 0.677 | 0.534 | 2.6e-30 | |
| ZFIN|ZDB-GENE-090311-51 | 160 | si:dkeyp-27c8.2 "si:dkeyp-27c8 | 0.900 | 0.962 | 0.445 | 3e-30 | |
| UNIPROTKB|E9PL57 | 170 | NEDD8-MDP1 "Protein NEDD8-MDP1 | 0.719 | 0.723 | 0.479 | 3.2e-26 | |
| ASPGD|ASPL0000029748 | 215 | AN5512 [Emericella nidulans (t | 0.426 | 0.339 | 0.465 | 3.5e-25 | |
| POMBASE|SPBP8B7.31 | 172 | SPBP8B7.31 "acid phosphatase ( | 0.777 | 0.773 | 0.390 | 8.3e-19 |
| RGD|1311147 Mdp1 "magnesium-dependent phosphatase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 81/156 (51%), Positives = 106/156 (67%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNN 72
+ PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP IL L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQSLG 62
Query: 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L+ TG+ + M+FFD
Sbjct: 63 VPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIFFD 122
Query: 133 DEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
DE RN DV LGVTCIH++DGMS +L +GL+ +A
Sbjct: 123 DENRNIIDVGKLGVTCIHIQDGMSLQMLTQGLETFA 158
|
|
| UNIPROTKB|Q86V88 MDP1 "Magnesium-dependent phosphatase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/156 (51%), Positives = 108/156 (69%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNN 72
+ PKLAVFDLD+TLWPF V V PPF K D V D G ++ Y +VP +LK L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLG 62
Query: 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132
AAASRT+E+ A+QL++LF+ ++F H+EI+PG K THF L++ TGI + M+FFD
Sbjct: 63 VPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFD 122
Query: 133 DEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
DE RN DVS LGVTCIH+++GM+ L +GL+ +A
Sbjct: 123 DERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFA 158
|
|
| UNIPROTKB|F1SGN7 LOC100520440 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 78/158 (49%), Positives = 109/158 (68%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVL-DAGGAIIKYYRDVPAILKYLKQ 70
+++ PKLAVFDLD+TLWPF V V PPF K D + D G ++ Y +VP +L+ L+
Sbjct: 1 MERLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTIRDRRGQTVRLYPEVPEVLERLQG 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT E+ A+QL++LF+ +HF H+EI+PG K THF L + TG+ + M+F
Sbjct: 61 LGVPVAAASRTGEVEGANQLLELFDLVRHFVHREIYPGSKVTHFERLHRKTGVPFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE+RN DVS LGV C+HV++GM+ L +GL+ +A
Sbjct: 121 FDDEKRNIVDVSKLGVACVHVQNGMNLQTLTQGLEVFA 158
|
|
| UNIPROTKB|F1MXF2 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/152 (52%), Positives = 105/152 (69%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNN 72
+ PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP +L+ L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKNSDGTVRDRRGQSIQLYPEVPEVLERLRGLG 62
Query: 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132
+AAASRT E+ A+QL++LF+ ++F H+EI+PG K THF L++ TG+ + M+FFD
Sbjct: 63 VPIAAASRTGEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFD 122
Query: 133 DEERNSHDVSPLGVTCIHVKDGMSHSVLHKGL 164
DE+RN DVS LGVTCIHV+ GMS L +GL
Sbjct: 123 DEKRNIVDVSKLGVTCIHVQHGMSLQTLTQGL 154
|
|
| MGI|MGI:1915131 Mdp1 "magnesium-dependent phosphatase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 81/156 (51%), Positives = 104/156 (66%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNN 72
+ PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP +L L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG 62
Query: 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L TG+ + MVFFD
Sbjct: 63 VPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFD 122
Query: 133 DEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
DE RN DV LGVTCIH++DGMS L +GL+ +A
Sbjct: 123 DENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFA 158
|
|
| UNIPROTKB|Q32PA3 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 245 (91.3 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 46/86 (53%), Positives = 64/86 (74%)
Query: 79 SRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNS 138
+RT E+ A+QL++LF+ ++F H+EI+PG K THF L++ TG+ + M+FFDDE+RN
Sbjct: 32 NRTGEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFDDEKRNI 91
Query: 139 HDVSPLGVTCIHVKDGMSHSVLHKGL 164
DVS LGVTCIHV+ GMS L +GL
Sbjct: 92 VDVSKLGVTCIHVQHGMSLQTLTQGL 117
|
|
| ZFIN|ZDB-GENE-090311-51 si:dkeyp-27c8.2 "si:dkeyp-27c8.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 70/157 (44%), Positives = 100/157 (63%)
Query: 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK--VLDAGGAIIKYYRDVPAILKYLKQNNC 73
PKL VFDLD+TLWPF V V PF I D+ V D+ + Y D IL+ L
Sbjct: 4 PKLIVFDLDYTLWPFWVDTHVQAPFH-IDDEGIVKDSRREKVPIYHDTEKILRSLHSQGY 62
Query: 74 LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 133
+ ASRT+E A+QL+ L+N +Q+ KEI+PG K THF LK A+G+++ DM+FFDD
Sbjct: 63 KIGIASRTSETEGANQLLSLYNLDQYISFKEIYPGSKVTHFKRLKSASGVQFSDMMFFDD 122
Query: 134 EERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170
EERN +V LGVTC+ V + ++ ++++ L+Q++ K
Sbjct: 123 EERNIVEVGRLGVTCVLVFNAITCNLVNTALEQFSKK 159
|
|
| UNIPROTKB|E9PL57 NEDD8-MDP1 "Protein NEDD8-MDP1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 59/123 (47%), Positives = 84/123 (68%)
Query: 41 KKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF 100
K+I V D G ++ Y +VP +LK L+ AAASRT+E+ A+QL++LF+ ++F
Sbjct: 48 KQIDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF 107
Query: 101 DHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 160
H+EI+PG K THF L++ TGI + M+FFDDE RN DVS LGVTCIH+++GM+ L
Sbjct: 108 VHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTL 167
Query: 161 HKG 163
+G
Sbjct: 168 SQG 170
|
|
| ASPGD|ASPL0000029748 AN5512 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 99 HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158
+FD+ +IFP KT HF+ + +A+GI Y+DM+FFDDE RN + + LGVT + V+DGM+
Sbjct: 133 YFDYIQIFPATKTQHFSRIHQASGIAYEDMLFFDDEARNRNVETELGVTFLLVRDGMTRD 192
Query: 159 VLHKGLKQWASKN 171
+ KG+ W +N
Sbjct: 193 EVDKGVWAWRRRN 205
|
|
| POMBASE|SPBP8B7.31 SPBP8B7.31 "acid phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 57/146 (39%), Positives = 77/146 (52%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFK--KIGDKVL-DAGGAIIKYYRDVPAILKYLKQ 70
+FPK VFDLD+TLWP + V PFK K VL D G I +Y D+ IL+ L+
Sbjct: 6 EFPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRN 65
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWN---------QHFDHKEIFPGQKTTHFANLKKAT 121
+ ASRT A Q ++L + F + + +PG K HF + +
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNES 125
Query: 122 GIEYKDMVFFDDEERNSHDVSPLGVT 147
GI+Y++MVFFDDE RN +V LGVT
Sbjct: 126 GIDYREMVFFDDESRN-REVERLGVT 150
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9D967 | MGDP1_MOUSE | 3, ., 1, ., 3, ., 4, 8 | 0.5126 | 0.9181 | 0.9573 | yes | N/A |
| Q86V88 | MGDP1_HUMAN | 3, ., 1, ., 3, ., 4, 8 | 0.5063 | 0.9181 | 0.8920 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.921 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 171 | |||
| pfam12689 | 164 | pfam12689, Acid_PPase, Acid Phosphatase | 8e-68 | |
| TIGR01685 | 174 | TIGR01685, MDP-1, magnesium-dependent phosphatase- | 2e-18 | |
| COG4996 | 164 | COG4996, COG4996, Predicted phosphatase [General f | 3e-08 | |
| TIGR01681 | 128 | TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas | 9e-08 |
| >gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 8e-68
Identities = 74/163 (45%), Positives = 98/163 (60%), Gaps = 7/163 (4%)
Query: 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKI-GDKVLDAGGAIIKYYRDVPAILKYLKQNNC 73
PKL VFDLD+TLWPF V PPFKK V+D G + Y DVP+IL+ LK+
Sbjct: 2 LPKLIVFDLDYTLWPFWCDTHVGPPFKKDKNGTVVDRRGEELSLYPDVPSILQELKEKGI 61
Query: 74 LVAAASRTTEMLRAHQLVDLFNWN------QHFDHKEIFPGQKTTHFANLKKATGIEYKD 127
+A ASRT A +L+ L + N +FD+ EI+PG KTTHF + K +G+ Y D
Sbjct: 62 TIAVASRTDAPDWARELLKLLHINDGPPAIDYFDYLEIYPGSKTTHFKKIHKKSGVPYSD 121
Query: 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170
M+FFDDE RN VS LGVT + V DG++ +GL++W +
Sbjct: 122 MLFFDDESRNIDVVSRLGVTFVLVPDGLTREEFERGLRKWRKR 164
|
This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164 |
| >gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 2e-18
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 19/174 (10%)
Query: 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIG---DKVLDAGGAIIKYYRDVPAILKYLKQN 71
P++ VFDLD TLW ++ + PFK + ++D G + ++V +L+ LK
Sbjct: 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA 60
Query: 72 NCLVAAASRTTEMLRAHQLVDLFN---------WNQHFDHKEIFP-GQKTTHFANL---- 117
+A AS A++++ F + FD + K +
Sbjct: 61 GTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120
Query: 118 --KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 169
+ ++ ++FFDD N +V GVT + GM K L+ W S
Sbjct: 121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTFKKILEMWRS 174
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174 |
| >gnl|CDD|227329 COG4996, COG4996, Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 3e-08
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 75
+ VFD D TLW H + PPF+++ + + D+ G + + DV LK+ + + ++
Sbjct: 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYIL 60
Query: 76 AAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-------QKTTHFANLKKATGIEYKDM 128
AS E +A + + + Q+F + I P + N ++ I+ ++
Sbjct: 61 GLASWNFED-KAIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEI 119
Query: 129 VFFDDEE 135
V+ DD
Sbjct: 120 VYLDDRR 126
|
Length = 164 |
| >gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 9e-08
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 21/136 (15%)
Query: 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVA 76
K+ VFDLD+TLW + V D + +++ L+ LK+N L+A
Sbjct: 1 KVIVFDLDNTLWTGENIV-VGE----------DPIIDLEVTIKEIRDKLQTLKKNGFLLA 49
Query: 77 AASRTT------EMLRAHQLVDLFNW-NQHFDHKEIFP-GQKTTHFAN--LKKATGIEYK 126
AS E+L+ + + ++FD I K+ LK ++ K
Sbjct: 50 LASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPK 109
Query: 127 DMVFFDDEERNSHDVS 142
++F DD N+ +V
Sbjct: 110 SILFVDDRPDNNEEVD 125
|
This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 171 | |||
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 100.0 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.97 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.92 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.91 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.91 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.91 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.91 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.9 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.9 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.9 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.9 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.9 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.9 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.89 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.89 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.89 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.89 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.89 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.89 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.89 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.89 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.88 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.88 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.88 | |
| PLN02940 | 382 | riboflavin kinase | 99.88 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.88 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.87 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.87 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.87 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 99.87 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.87 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.86 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.86 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.86 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.86 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.86 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.86 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.86 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.85 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.85 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.84 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.84 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.84 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.84 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.84 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.83 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.83 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.82 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.82 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.82 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.82 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.81 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.81 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.81 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.8 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.8 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.8 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.8 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.79 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.78 | |
| KOG3085|consensus | 237 | 99.78 | ||
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.76 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.75 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.74 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.74 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.73 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.73 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.73 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.73 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.72 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.71 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.71 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.7 | |
| PLN02811 | 220 | hydrolase | 99.69 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.69 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.68 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.67 | |
| KOG3109|consensus | 244 | 99.67 | ||
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.65 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.65 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.63 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.62 | |
| KOG2914|consensus | 222 | 99.62 | ||
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.61 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.59 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.59 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.58 | |
| KOG2882|consensus | 306 | 99.57 | ||
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.56 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.56 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.54 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.54 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.52 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.51 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.49 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.49 | |
| KOG4549|consensus | 144 | 99.48 | ||
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.45 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 99.45 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.42 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.41 | |
| KOG3040|consensus | 262 | 99.4 | ||
| PRK10976 | 266 | putative hydrolase; Provisional | 99.4 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.4 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.38 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.36 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.34 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.33 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.32 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.31 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.3 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.29 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.28 | |
| KOG1615|consensus | 227 | 99.26 | ||
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.21 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 99.2 | |
| PLN02887 | 580 | hydrolase family protein | 99.2 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 99.2 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 99.2 | |
| KOG3120|consensus | 256 | 99.18 | ||
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.18 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.17 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.16 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.13 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.13 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.12 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.11 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.08 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.07 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.06 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 99.06 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.03 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.02 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.01 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 99.0 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.97 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.95 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.91 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.9 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.89 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.88 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 98.85 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.83 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.83 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.81 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.75 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.69 | |
| PLN02423 | 245 | phosphomannomutase | 98.67 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.67 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.65 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.6 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.58 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.58 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.56 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 98.53 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.52 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.49 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.47 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 98.46 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.44 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.41 | |
| KOG2961|consensus | 190 | 98.37 | ||
| PLN02580 | 384 | trehalose-phosphatase | 98.36 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 98.31 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 98.29 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.23 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.16 | |
| KOG2630|consensus | 254 | 98.15 | ||
| KOG2134|consensus | 422 | 98.06 | ||
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.97 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.88 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 97.87 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.87 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.79 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.78 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.72 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 97.7 | |
| PLN02151 | 354 | trehalose-phosphatase | 97.67 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.45 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 97.44 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.43 | |
| KOG0207|consensus | 951 | 97.41 | ||
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.38 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.34 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.33 | |
| KOG1618|consensus | 389 | 97.1 | ||
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.04 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 96.96 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.91 | |
| KOG1605|consensus | 262 | 96.91 | ||
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.88 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.87 | |
| KOG3189|consensus | 252 | 96.87 | ||
| KOG2116|consensus | 738 | 96.83 | ||
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.83 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 96.68 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 96.62 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.4 | |
| KOG0202|consensus | 972 | 96.12 | ||
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 96.12 | |
| KOG2470|consensus | 510 | 96.08 | ||
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.95 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.75 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.66 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 95.54 | |
| KOG3107|consensus | 468 | 95.53 | ||
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 95.26 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 95.18 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 95.17 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.95 | |
| KOG2469|consensus | 424 | 94.34 | ||
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 93.68 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 93.68 | |
| PF04312 | 138 | DUF460: Protein of unknown function (DUF460); Inte | 93.64 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 93.58 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 93.51 | |
| KOG0209|consensus | 1160 | 93.31 | ||
| KOG2832|consensus | 393 | 92.13 | ||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 91.53 | |
| KOG0204|consensus | 1034 | 90.99 | ||
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 90.73 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 90.36 | |
| KOG0210|consensus | 1051 | 90.1 | ||
| PRK08005 | 210 | epimerase; Validated | 89.48 | |
| KOG3128|consensus | 298 | 87.85 | ||
| COG0036 | 220 | Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate | 87.7 | |
| TIGR02329 | 526 | propionate_PrpR propionate catabolism operon regul | 85.82 | |
| TIGR02495 | 191 | NrdG2 anaerobic ribonucleoside-triphosphate reduct | 85.62 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 84.24 | |
| KOG0323|consensus | 635 | 83.11 | ||
| PRK08745 | 223 | ribulose-phosphate 3-epimerase; Provisional | 82.58 | |
| COG0761 | 294 | lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate redu | 82.41 | |
| PRK09348 | 283 | glyQ glycyl-tRNA synthetase subunit alpha; Validat | 82.17 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 81.9 | |
| PF06506 | 176 | PrpR_N: Propionate catabolism activator; InterPro: | 81.68 | |
| cd00733 | 279 | GlyRS_alpha_core Class II Glycyl-tRNA synthetase ( | 81.52 | |
| PRK15424 | 538 | propionate catabolism operon regulatory protein Pr | 81.2 | |
| PLN02334 | 229 | ribulose-phosphate 3-epimerase | 80.88 | |
| TIGR00388 | 293 | glyQ glycyl-tRNA synthetase, tetrameric type, alph | 80.46 |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=210.01 Aligned_cols=156 Identities=48% Similarity=0.796 Sum_probs=124.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecC-c-eeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIG-D-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
.||+||||||.|||++|++.++.+||++.. . .+.|+.+..+.+||++.++|+.|+++|++++++|.++.|+.+++.|+
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence 589999999999999999999999999998 5 89999999999999999999999999999999998888899999999
Q ss_pred hcCcc----------cccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCcHHHHHH
Q psy4436 93 LFNWN----------QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHK 162 (171)
Q Consensus 93 ~~~l~----------~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~~~ 162 (171)
.+++. .+|++.++++..|..+|+.+.++.|+++++++||||..+|+...+++|+.+++|++|.+.+.+++
T Consensus 82 ~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~ 161 (169)
T PF12689_consen 82 LLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER 161 (169)
T ss_dssp HTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred hcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q psy4436 163 GLKQWASK 170 (171)
Q Consensus 163 ~~~~~~~~ 170 (171)
+|++|+++
T Consensus 162 gL~~~~~k 169 (169)
T PF12689_consen 162 GLEKFRKK 169 (169)
T ss_dssp HHHHHHH-
T ss_pred HHHHHhhC
Confidence 99999875
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=181.82 Aligned_cols=154 Identities=27% Similarity=0.445 Sum_probs=132.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecC---ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCC-chhHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIG---DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT-TEMLRAHQL 90 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~-~~~~~~~~~ 90 (171)
+||++|||+|+|||+++.++....|+.... ..+.+..+....++||+.++|+.|+++|++++++||+ .. ..+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~-~~~~~~ 79 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVP-EWAYEI 79 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCCh-HHHHHH
Confidence 489999999999999999998888888665 5688888899999999999999999999999999998 55 777889
Q ss_pred HHhcCcc---------cccceeeEe---cCCc--HHHHHHHHHHh--CCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 91 VDLFNWN---------QHFDHKEIF---PGQK--TTHFANLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 91 l~~~~l~---------~~fd~~~~~---~~~k--~~~~~~~~~~~--~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++.+++. .+|+.+... .+++ +..++.+.+.+ +++|++|+||||+..|+.+|+++|+.++++++|
T Consensus 80 L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 80 LGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSG 159 (174)
T ss_pred HHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCC
Confidence 9999998 899876332 1223 34445554555 799999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhhh
Q psy4436 155 MSHSVLHKGLKQWAS 169 (171)
Q Consensus 155 ~~~~~~~~~~~~~~~ 169 (171)
....++.+.+++|..
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (174)
T TIGR01685 160 MDKGTFKKILEMWRS 174 (174)
T ss_pred ccHHHHHHHHHHhcC
Confidence 999999999999963
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=170.49 Aligned_cols=106 Identities=12% Similarity=0.187 Sum_probs=95.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++++++..+|+.+.. .+||+|+.|.+++++++++|+++
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 184 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPR-ENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHT 184 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHE
Confidence 467899999999999999999999999988 788889999999999987622 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCcHHHH
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 160 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~ 160 (171)
+||||+..|+.+|+++|+.++++.+|...+.+
T Consensus 185 l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l 216 (248)
T PLN02770 185 FVFEDSVSGIKAGVAAGMPVVGLTTRNPESLL 216 (248)
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHH
Confidence 99999999999999999999999887654433
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-25 Score=164.23 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=92.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
..+++||+.++|+.|+++|++++|+||++. ......++++++..+|+.+.. ..||+|+.|.++++++|++|+++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 468899999999999999999999999987 777778999999999987622 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+||||+..|+.+|+++|+.++++.+|..
T Consensus 172 l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 199 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPSVAALWGYR 199 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence 9999999999999999999999988763
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=162.27 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=92.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||+.. ......++.+++..+|+.+.. .+||+++.|+.+++++|++|++|
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 168 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASPL-HMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTC 168 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 467899999999999999999999999977 777789999999999987732 35899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+..|+.+|+++|+.++++.++..
T Consensus 169 ~~igDs~~Di~aA~~aG~~~i~v~~~~~ 196 (222)
T PRK10826 169 VALEDSFNGMIAAKAARMRSIVVPAPEQ 196 (222)
T ss_pred EEEcCChhhHHHHHHcCCEEEEecCCcc
Confidence 9999999999999999999999987653
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-25 Score=161.60 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=93.6
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++|+||+.. ..+...++.+++..+|+.+.. ..||+|+.|++++++++++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMR-DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 3467899999999999999999999999987 777889999999999988733 2489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++||||+..|+.+|+++|+.++++.+|..
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~ 186 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIK 186 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 99999999999999999999999998864
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=146.42 Aligned_cols=120 Identities=21% Similarity=0.172 Sum_probs=97.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc--------hhHHHH
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT--------EMLRAH 88 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~--------~~~~~~ 88 (171)
|+++||+||||++.-.. ........++|++.++|+.|+++|++++++||++ . ....
T Consensus 1 k~~~~D~dgtL~~~~~~---------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~~~ 64 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY---------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS-GRVA 64 (132)
T ss_pred CEEEEeCCCceecCCCC---------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHH-HHHH
Confidence 68999999999963111 1111245789999999999999999999999997 5 5667
Q ss_pred HHHHhcCccccccee-eEecCCcHHHHHHHHHHh-CCCCCcEEEEcC-CcccccccccCCceEEEeC
Q psy4436 89 QLVDLFNWNQHFDHK-EIFPGQKTTHFANLKKAT-GIEYKDMVFFDD-EERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 89 ~~l~~~~l~~~fd~~-~~~~~~k~~~~~~~~~~~-~~~~~~~l~vgD-~~~di~~a~~~G~~~i~v~ 152 (171)
..++.+++..+|... ....||++++|+++++++ +++|++++|||| +..|+.+|+++|+.+++++
T Consensus 65 ~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 65 RRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred HHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 789999987433322 124599999999999999 599999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=152.61 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=100.8
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh-------HHHH
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM-------LRAH 88 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~-------~~~~ 88 (171)
+|+|+||.||||..+-... ....+.++||+.++|+.|+++|++++|+||++.. ....
T Consensus 4 ~~~~~~d~d~~~~~~~~~~----------------~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~ 67 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIH----------------YPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV 67 (173)
T ss_pred CcEEEEeCCCcccCCCCCC----------------CHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH
Confidence 7999999999995321110 1136788999999999999999999999998631 0123
Q ss_pred HHHHhcCcccccceee------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 89 QLVDLFNWNQHFDHKE------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 89 ~~l~~~~l~~~fd~~~------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
..++.+++..+|.... ...||+|++|++++++++++|++|+||||+..|+.+|+++|+.++++.+|..
T Consensus 68 ~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~ 141 (173)
T PRK06769 68 QELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAG 141 (173)
T ss_pred HHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCC
Confidence 3477788877664432 2459999999999999999999999999999999999999999999988764
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-24 Score=148.31 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=99.7
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch-------------
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE------------- 83 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~------------- 83 (171)
++++||+||||++..+... .......+++||+.++|+.|+++|++++|+||++.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~-------------~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDY-------------PRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCccc-------------CCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 4799999999988665321 11223568899999999999999999999999862
Q ss_pred -hHHHHHHHHhcCccc---cccee-----eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 84 -MLRAHQLVDLFNWNQ---HFDHK-----EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 84 -~~~~~~~l~~~~l~~---~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.......++++++.. ++... ....||++++|+.+++++++++++++||||+..|+.+|+++|+.++++.+|
T Consensus 68 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 68 PNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 034555788888862 22211 123589999999999999999999999999999999999999999999765
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=159.62 Aligned_cols=101 Identities=15% Similarity=0.260 Sum_probs=91.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|+.|+++|++++++||++. ......++++++..+|+.+.. ..||+|+.|+.++++++++|++++
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLP-VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 57899999999999999999999999977 667779999999999987622 348999999999999999999999
Q ss_pred EEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 130 FFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 130 ~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
||||+. .|+.+|+++|+.++++.++..
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~~~~ 199 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQGKS 199 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCCC
Confidence 999998 799999999999999987654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-24 Score=160.12 Aligned_cols=102 Identities=16% Similarity=0.239 Sum_probs=89.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---E--ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---I--FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---~--~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++|+||++. ......++.+++..+|+.+. . .+||+|+.|.+++++++++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHP-HNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCH-HHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 3467899999999999999999999999877 67777899999999998762 1 3489999999999999999999
Q ss_pred EEEEcCCcccccccccCCce-EEEeCCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVT-CIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~-~i~v~~g~ 155 (171)
|+||||+..|+.+|+++|+. ++.+.++.
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 99999999999999999997 46676544
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-24 Score=158.07 Aligned_cols=100 Identities=18% Similarity=0.160 Sum_probs=90.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++++||++. ......++.+|+..+|+.+. ...||++++|+.++++++++|+++
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSP-AMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 467899999999999999999999999988 77788999999999998772 235899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++|||+..|+.+|+++|+.++++..+
T Consensus 169 ~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 169 LFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 99999999999999999999999653
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-24 Score=158.95 Aligned_cols=101 Identities=16% Similarity=0.203 Sum_probs=93.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|..|+.+|++++|+||++. ..+...++++|+..+|+.+.+ .+||+|..+..++++++++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~-~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 57899999999999999999999999988 888889999999999988744 348899999999999999988999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCc
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
||||+..|+.+|+++|+.++.+.+|+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 999999999999999999999999874
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-24 Score=161.91 Aligned_cols=99 Identities=11% Similarity=0.143 Sum_probs=90.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++++++..+|+.+.. .+||+|++|..++++++++|++|
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPR-RYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCH-HHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 457899999999999999999999999987 777889999999999988722 35999999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+||||+..|+.+|+++|+.++++.+
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEec
Confidence 9999999999999999999999963
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=155.80 Aligned_cols=102 Identities=12% Similarity=-0.025 Sum_probs=88.1
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++|+||++. ......++..++. +|+.+. ..+||+|+.|..+++++|++|++
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~-~~~~~~l~~~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSV-PVASARHKAAGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCc-hHHHHHHHhcCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 4568899999999999999999999999987 5566678888874 455441 13489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|+||||+..|+.+|+++|+.++++.++..
T Consensus 158 ~l~igDs~~di~aA~~aG~~~i~v~~~~~ 186 (218)
T PRK11587 158 CVVVEDAPAGVLSGLAAGCHVIAVNAPAD 186 (218)
T ss_pred EEEEecchhhhHHHHHCCCEEEEECCCCc
Confidence 99999999999999999999999987654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=159.11 Aligned_cols=102 Identities=9% Similarity=-0.037 Sum_probs=91.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-ceeeE-----ecCCcHHHHHHHHHHhCCC-CC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEI-----FPGQKTTHFANLKKATGIE-YK 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~~~-----~~~~k~~~~~~~~~~~~~~-~~ 126 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++.+++..+| +.+.. ..||+|++|.++++++++. |+
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 175 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVA 175 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCch
Confidence 457899999999999999999999999988 7788899999999886 66511 3489999999999999995 99
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++||||+..|+.+|+++|+.+++|.+|..
T Consensus 176 ~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 176 ACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred heEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 999999999999999999999999998864
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-24 Score=156.64 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=92.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++++++..+|+.+.. ..||+|+.|.+++++++++|+++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 467899999999999999999999999977 778889999999999987632 24899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+||||+..|+.+|+++|+.++++.+|..
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v~~g~~ 189 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLLTYGYR 189 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence 9999999999999999999999988764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-24 Score=155.48 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=93.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++|+||++. ..+...++.+++..+|+.+.. .+||+++.|+.++++++++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSG-PRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 3578899999999999999999999999987 667778999999999987622 3589999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++||||+..|+.+|+++|+.++.+.||..
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~ 179 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEG 179 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCC
Confidence 99999999999999999999999998874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=146.18 Aligned_cols=127 Identities=14% Similarity=0.010 Sum_probs=99.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch-----------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE----------- 83 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~----------- 83 (171)
|.|+++||+||||.-.. . .+........++||+.++|+.|+++|++++|+||++.
T Consensus 2 ~~~~~~~d~~~t~~~~~-~-------------~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~ 67 (181)
T PRK08942 2 SMKAIFLDRDGVINVDS-D-------------GYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQL 67 (181)
T ss_pred CccEEEEECCCCcccCC-c-------------cccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHH
Confidence 67999999999985321 1 1122334678999999999999999999999999862
Q ss_pred ---hHHHHHHHHhcCcccccceee----------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 84 ---MLRAHQLVDLFNWNQHFDHKE----------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 84 ---~~~~~~~l~~~~l~~~fd~~~----------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
.+.....++++++. |+.+. ...||+|++|.+++++++++|++++||||+..|+.+|+++|+.+++
T Consensus 68 ~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~ 145 (181)
T PRK08942 68 NALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVL 145 (181)
T ss_pred HHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence 02233355666652 43321 2359999999999999999999999999999999999999999999
Q ss_pred eCCCCcH
Q psy4436 151 VKDGMSH 157 (171)
Q Consensus 151 v~~g~~~ 157 (171)
+.+|...
T Consensus 146 v~~g~~~ 152 (181)
T PRK08942 146 VRTGKGV 152 (181)
T ss_pred EcCCCCc
Confidence 9887643
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=158.55 Aligned_cols=104 Identities=13% Similarity=0.226 Sum_probs=92.6
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEec--CCcHHHHHHHHHHhCCCCCcEEE
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKKATGIEYKDMVF 130 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~ 130 (171)
...+++||+.++|+.|+++|++++|+||++. ..+...++.+++..+|+.+.... .+|++.|.+++++++++|++++|
T Consensus 139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~-~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~ 217 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRSLCLGILSSNSR-QNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMY 217 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEE
Confidence 3567899999999999999999999999988 88888999999999998763221 35778899999999999999999
Q ss_pred EcCCcccccccccCCceEEEeCCCCcH
Q psy4436 131 FDDEERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 131 vgD~~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
|||+..|+.+|+++|+.++++.+|...
T Consensus 218 IGDs~~Di~aA~~AG~~~I~v~~g~~~ 244 (273)
T PRK13225 218 VGDETRDVEAARQVGLIAVAVTWGFND 244 (273)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCC
Confidence 999999999999999999999988653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-23 Score=164.60 Aligned_cols=104 Identities=9% Similarity=0.074 Sum_probs=94.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++++++..||+.+.. ..||+|++|.+++++++++|++|
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peec 292 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERC 292 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999999999999999999999988 888889999999999998722 24899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
++|||+..|+.+|+++|+.+|++.++....
T Consensus 293 l~IGDS~~DIeAAk~AGm~~IgV~~~~~~~ 322 (381)
T PLN02575 293 IVFGNSNQTVEAAHDARMKCVAVASKHPIY 322 (381)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCChh
Confidence 999999999999999999999998765433
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=145.34 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=95.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh------------
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------------ 84 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~------------ 84 (171)
|+++||.||||+...-+. ......+++||+.++|+.|+++|++++|+||++..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~---------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV---------------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCCCCC---------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 689999999998422111 12346789999999999999999999999998731
Q ss_pred --HHHHHHHHhcCccccccee----------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 85 --LRAHQLVDLFNWNQHFDHK----------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 85 --~~~~~~l~~~~l~~~fd~~----------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
......+..+++. |+.+ ....||+|++|.+++++++++|++++||||+..|+.+|+++|+
T Consensus 67 ~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~ 144 (176)
T TIGR00213 67 LTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV 144 (176)
T ss_pred HHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence 1222345555544 3222 1135999999999999999999999999999999999999999
Q ss_pred eE-EEeCCCCc
Q psy4436 147 TC-IHVKDGMS 156 (171)
Q Consensus 147 ~~-i~v~~g~~ 156 (171)
.+ +++.+|..
T Consensus 145 ~~~i~v~~g~~ 155 (176)
T TIGR00213 145 KTNVLVRTGKP 155 (176)
T ss_pred cEEEEEecCCc
Confidence 98 78888764
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-23 Score=151.36 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=91.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc--cccceeeE-----ecCCcHHHHHHHHHHhCCC-C
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKEI-----FPGQKTTHFANLKKATGIE-Y 125 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~--~~fd~~~~-----~~~~k~~~~~~~~~~~~~~-~ 125 (171)
...++||+.++|+.|+++|++++|+||++. ......++.+++. .+|+.+.. ..||+|+.|..++++++++ |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDR-DTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 357999999999999999999999999988 7788899999998 89987622 2389999999999999997 7
Q ss_pred CcEEEEcCCcccccccccCCceE-EEeCCCCc
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTC-IHVKDGMS 156 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~-i~v~~g~~ 156 (171)
++++||||+..|+.+|+++|+.+ +++.+|..
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~ 195 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAH 195 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCC
Confidence 99999999999999999999999 89988754
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-23 Score=159.78 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=91.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ......++.+++..+|+.+.. ..||+++.|+.+++++|++|+++
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~-~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPE-RFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcH-HHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 356899999999999999999999999987 677778999999999987622 24889999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+||||+.+|+.+|+++|+.++++.+|+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~ 205 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYN 205 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCC
Confidence 9999999999999999999999988754
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=141.76 Aligned_cols=132 Identities=15% Similarity=0.083 Sum_probs=104.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc--------------
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT-------------- 82 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~-------------- 82 (171)
|+++||.||||+..-... ........++++||+.++|+.|+++|++++|+||++
T Consensus 2 ~~~~~d~dg~l~~~~~~~------------~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD------------FQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCCc------------cccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 689999999998732211 111223467899999999999999999999999973
Q ss_pred hhHHHHHHHHhcCcccccceee----------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 83 EMLRAHQLVDLFNWNQHFDHKE----------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 83 ~~~~~~~~l~~~~l~~~fd~~~----------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
........++.+|+. |+.+. ...||+++++..+++++++++++++||||+..|+.+|+++|+.++++.
T Consensus 70 ~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 70 PHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred HHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 114566688889987 54321 134899999999999999999999999999999999999999999996
Q ss_pred C-CCcHHHHHH
Q psy4436 153 D-GMSHSVLHK 162 (171)
Q Consensus 153 ~-g~~~~~~~~ 162 (171)
. ..++..+.+
T Consensus 148 ~~~~~~~~~~~ 158 (161)
T TIGR01261 148 EEELNWDMIAE 158 (161)
T ss_pred hhhcCHHHHHH
Confidence 6 467776643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-23 Score=157.91 Aligned_cols=102 Identities=13% Similarity=-0.034 Sum_probs=89.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-ceee-----EecCCcHHHHHHHHHHhCCC-CC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKE-----IFPGQKTTHFANLKKATGIE-YK 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~~-----~~~~~k~~~~~~~~~~~~~~-~~ 126 (171)
...++||+.++|+.|+++|++++|+||++. ......++.+++..+| +.+. ...||+|+.|.++++++++. |+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~-~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 177 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTR-EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVA 177 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 357899999999999999999999999988 7777788888887765 6551 13489999999999999996 69
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|+||||+..|+.+|+++|+.++++.+|..
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 999999999999999999999999988764
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-23 Score=154.06 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=92.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++.||+.++|+.|+++|++++++|+++. ......++.+++..+|+.+. ..+||.|+.|.++++++|++|++
T Consensus 83 ~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~-~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~ 161 (221)
T COG0637 83 EGLKPIPGVVELLEQLKARGIPLAVASSSPR-RAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEE 161 (221)
T ss_pred cCCCCCccHHHHHHHHHhcCCcEEEecCChH-HHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHH
Confidence 4678999999999999999999999999987 77787999999999998751 13489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|+.|+|+..++.+|+++|+.++.+..+.+
T Consensus 162 CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 162 CVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred eEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999986443
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-23 Score=164.26 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=91.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH-hcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD-LFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~-~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++ ..++..+|+.+.. .+||+|+.|..++++++++|++
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~-~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~ 169 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPR-ANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSN 169 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhH
Confidence 457899999999999999999999999987 66666776 7899999988722 3589999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|++|||+..|+.+|+++|+.++++.++..
T Consensus 170 ~l~VGDs~~Di~aA~~aGi~~I~v~~g~~ 198 (382)
T PLN02940 170 CLVIEDSLPGVMAGKAAGMEVIAVPSIPK 198 (382)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence 99999999999999999999999988653
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.4e-23 Score=152.31 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=92.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++++||+.. .....+++.+++..+|+.+.. ..||+|+.|+.++++++++++++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 467899999999999999999999999977 777779999999999987622 24889999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+.+|+.+|+++|+.++++.+|..
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~ 197 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYN 197 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCC
Confidence 9999999999999999999999988764
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-23 Score=148.83 Aligned_cols=96 Identities=14% Similarity=0.186 Sum_probs=85.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|+ .++|..|++. ++++|+||++. ..+...++++++..||+.+.. ..||+|+.|.+++++++++|+++
T Consensus 86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHGR-RPMAVGTGSES-AIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred cCCCccH-HHHHHHHHhC-CCEEEEcCCch-HHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 4567775 6899999876 89999999987 778889999999999988722 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+||||+..|+.+|+++|+.++++.
T Consensus 163 l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999985
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-22 Score=151.08 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=86.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCC-CCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIE-YKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~-~~~ 127 (171)
...++||+.++|+.|+ +|++++|+||++. ......++.+++..+|+.+.. .+||+|++|.++++++++. +++
T Consensus 93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred cCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 3578999999999999 6799999999977 777778999999999988722 3599999999999999985 589
Q ss_pred EEEEcCCc-ccccccccCCceEEEeCC
Q psy4436 128 MVFFDDEE-RNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 128 ~l~vgD~~-~di~~a~~~G~~~i~v~~ 153 (171)
++||||+. .|+.+|+++|+.++++.+
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 99999998 599999999999999964
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=147.09 Aligned_cols=105 Identities=24% Similarity=0.280 Sum_probs=88.8
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh-cCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~-~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
..++||+.++|+.|+++|++++|+||++. ......+.. .++..+|+.+. ...||+|+.|+.+++++|++|+++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCch-hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 35799999999999999999999999977 444434444 46777887662 234999999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCcHHHH
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 160 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~ 160 (171)
+||||+..|+.+|+++|+.++++.++.+..+.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~ 193 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDY 193 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHH
Confidence 99999999999999999999999887765544
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=126.68 Aligned_cols=134 Identities=25% Similarity=0.461 Sum_probs=115.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
++|+||+||||||++..+.+.+||.+.+ ..+.|..+..+.++|.|+++++.+++.|+.++.+|.+.. +.+.+.+..++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~-~kA~~aLral~ 79 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALD 79 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch-HHHHHHHHHhc
Confidence 3799999999999999999999999999 999999999999999999999999999999999999866 88888999999
Q ss_pred cccccceeeEecCCcH-HHHHHHHHHh------CCCCCcEEEEcCCccccccccc-CC-ceEEEe
Q psy4436 96 WNQHFDHKEIFPGQKT-THFANLKKAT------GIEYKDMVFFDDEERNSHDVSP-LG-VTCIHV 151 (171)
Q Consensus 96 l~~~fd~~~~~~~~k~-~~~~~~~~~~------~~~~~~~l~vgD~~~di~~a~~-~G-~~~i~v 151 (171)
+..||++..+.|.|.. .++.++++.+ .++|.+++|++|+...+...+. +| ++++..
T Consensus 80 ~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~ 144 (164)
T COG4996 80 LLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEM 144 (164)
T ss_pred hhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEe
Confidence 9999999877776643 5566666544 4789999999999998777666 66 455544
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-22 Score=148.83 Aligned_cols=100 Identities=8% Similarity=0.052 Sum_probs=90.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHh-CCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKAT-GIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~-~~~~~~ 127 (171)
...++||+.++|+.|+++ ++++++||++. ......++.+++..+|+.+.. ..||+|.+|+++++++ +++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVR-ETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCch-HHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 357899999999999999 99999999987 777889999999999988732 3489999999999999 999999
Q ss_pred EEEEcCCc-ccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEE-RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~-~di~~a~~~G~~~i~v~~g~ 155 (171)
++||||+. .|+.+|+++|++++++.++.
T Consensus 173 ~v~igD~~~~di~~A~~~G~~~i~~~~~~ 201 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQNAGLDTCWMNPDM 201 (224)
T ss_pred eEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 99999998 69999999999999997753
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-22 Score=148.57 Aligned_cols=145 Identities=21% Similarity=0.225 Sum_probs=107.4
Q ss_pred CCCCCCcccccCCcEEEEeCCCCCCCceecccc----CCc----------------c-----------eecCceeeccCC
Q psy4436 4 IPHKLDPSVKKFPKLAVFDLDHTLWPFHVYIDV----IPP----------------F-----------KKIGDKVLDAGG 52 (171)
Q Consensus 4 ~~~~~~~~~~~~~k~vvfDlDgTL~~~~~~~~~----~~~----------------~-----------~~~~~~~~~~~~ 52 (171)
|.++.-+.+..+.|+++||+||||++......+ +.+ + .......++...
T Consensus 2 ~~~~~~~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (219)
T TIGR00338 2 IAHSELSPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVR 81 (219)
T ss_pred cccccchhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 344444455567899999999999986544221 110 0 000000111222
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----------e-----EecCCcHHHHHHH
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------E-----IFPGQKTTHFANL 117 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----------~-----~~~~~k~~~~~~~ 117 (171)
....++||+.++|+.|+++|++++|+||+.. ..+..+++.+++..+|+.. . ..++||+..|+++
T Consensus 82 ~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 82 ENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 3467899999999999999999999999977 7788899999998888421 0 1125689999999
Q ss_pred HHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 118 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 118 ~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
+++++++|++++||||+.+|+.+|+++|+...
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIA 192 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEE
Confidence 99999999999999999999999999999753
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-22 Score=147.95 Aligned_cols=102 Identities=20% Similarity=0.175 Sum_probs=85.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhH-HHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEML-RAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~-~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++||+.++|+.|+++|++++|+||++... .....+...++..+|+.+. ...||+|.+|+.++++++++|++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 46789999999999999999999999986522 1222344567778888762 13599999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
|+||||+..|+.+|+++|+.++++.++.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 9999999999999999999999997644
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=141.85 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=84.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|+.|+++|++++|+||+.. ....++.+++..+|+.+. ..+||+|+.|++++++++++|++++
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 46899999999999999999999999744 345899999999998762 2358999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeC
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+|||+.+|+.+|+++|+.+++|.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=134.48 Aligned_cols=116 Identities=28% Similarity=0.365 Sum_probs=90.5
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC-
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN- 95 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~- 95 (171)
|+++||||||||+........ ..+... . .++||+.++|+.|+++|++++++||++.+......++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~-------~~~~~~---~-~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE-------DPIIDL---E-VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC-------Ccchhh---H-HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 689999999999864321000 000000 1 5799999999999999999999999944377877888888
Q ss_pred ------cccccceeeEe-cCCcHHHHHHHHHHhC--CCCCcEEEEcCCccccccccc
Q psy4436 96 ------WNQHFDHKEIF-PGQKTTHFANLKKATG--IEYKDMVFFDDEERNSHDVSP 143 (171)
Q Consensus 96 ------l~~~fd~~~~~-~~~k~~~~~~~~~~~~--~~~~~~l~vgD~~~di~~a~~ 143 (171)
+..+|+.+... .+|+|+.|..+++++| ++|++|+||||+..|+...++
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 78888876333 4688888999999999 999999999999999876554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=141.00 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=85.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++++||+ . .+...++.+++..+|+.+.. .+||++++|.+++++++++|+++
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~--~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 162 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS-K--NADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC 162 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc-h--hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 3678999999999999999999999998 3 35668999999999987722 35888999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEe
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+||||+..|+.+|+++|+.++.|
T Consensus 163 v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 163 VVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred EEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=141.49 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=84.5
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
.+++||+.++|+.|+++|++++++||++. .. .....++++..+|+.+.. .+||+|..|+.++++++++|++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR-DH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch-HH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 57899999999999999999999999987 44 545566999999987622 358999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEe
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v 151 (171)
||||+..|+.+|+++|+.++++
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=137.59 Aligned_cols=116 Identities=16% Similarity=0.035 Sum_probs=97.6
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
.+++|++|+||||+.. ....++|++.++|+.|+++|++++++||++....+..+++.+
T Consensus 24 ~v~~vv~D~Dgtl~~~----------------------~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~ 81 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYP----------------------DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL 81 (170)
T ss_pred CCCEEEEecCCccccC----------------------CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc
Confidence 4689999999999752 134679999999999999999999999997225566566777
Q ss_pred CcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 95 NWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 95 ~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
++..++ ...||++++|..+++++++++++++||||+. .|+.+|+++|+.++++.+|..
T Consensus 82 gl~~~~----~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 82 GIPVLP----HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCEEEc----CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 765332 2348999999999999999999999999998 599999999999999988763
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-21 Score=137.42 Aligned_cols=98 Identities=16% Similarity=0.269 Sum_probs=90.0
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. .+||++..|++++++++++|++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 5789999999999999999999999999987 777789999999999987722 3489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEe
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
++||||+..|+.+|+++|+.+++|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
|
... |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=142.93 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=83.7
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|+.|+++|++++|+||+.. . ....++.+++..+|+.+. ...||+|++|.+++++++++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDS-R-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCch-h-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 46899999999999999999999999865 4 466899999999998772 2348999999999999999999999
Q ss_pred EEcCCc-ccccccccCCceEEE
Q psy4436 130 FFDDEE-RNSHDVSPLGVTCIH 150 (171)
Q Consensus 130 ~vgD~~-~di~~a~~~G~~~i~ 150 (171)
+|||+. .|+.+|+++|+.+++
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 999998 799999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-21 Score=141.22 Aligned_cols=94 Identities=18% Similarity=0.262 Sum_probs=83.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----e----cCCcHHHHHHHHHHhCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----F----PGQKTTHFANLKKATGIE 124 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~----~~~k~~~~~~~~~~~~~~ 124 (171)
..+++||+.++|+.|+ ++++++||++. ......++.+|+..+|+.+.. . +||+|++|+.++++++++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDR-AHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCH-HHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4568999999999998 47999999988 777889999999999987622 1 489999999999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEe
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
|++++||||+..|+.+|+++|+.+++|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-21 Score=146.85 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=85.1
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc---cee--e--EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF---DHK--E--IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f---d~~--~--~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
+.++||+.++|+.|+++|++++|+||++. ......++.+....+| +.+ + ..+||+|++|.+++++++++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE-KAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 47899999999999999999999999988 6666677766433333 332 1 13489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++||||+..|+.+|+++|+.++++.+|..
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 250 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYT 250 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCc
Confidence 99999999999999999999999988754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.2e-21 Score=135.70 Aligned_cols=121 Identities=16% Similarity=0.188 Sum_probs=93.0
Q ss_pred CcEEEEeCCCCCCCceecc-ccCCcceecCceeeccCCCeee-eCCCHHHHHHHHhhCCcEEEEEcCCchh---------
Q psy4436 16 PKLAVFDLDHTLWPFHVYI-DVIPPFKKIGDKVLDAGGAIIK-YYRDVPAILKYLKQNNCLVAAASRTTEM--------- 84 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~l~~L~~~g~~i~i~S~~~~~--------- 84 (171)
.|+++||+||||+...... ++ .....++ ++||+.++|+.|+++|++++|+||++..
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~-------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~ 79 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFP-------------TSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAES 79 (166)
T ss_pred CcEEEEeCCCceEecCCCCccc-------------CChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHH
Confidence 5889999999998633211 10 0112333 6899999999999999999999998652
Q ss_pred --HHHHHHHHhcCccccccee----eEecCCcHHHHHHHHHHhC--CCCCcEEEEcCCc--------ccccccccCCceE
Q psy4436 85 --LRAHQLVDLFNWNQHFDHK----EIFPGQKTTHFANLKKATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTC 148 (171)
Q Consensus 85 --~~~~~~l~~~~l~~~fd~~----~~~~~~k~~~~~~~~~~~~--~~~~~~l~vgD~~--------~di~~a~~~G~~~ 148 (171)
..+...++.+++.. +..+ ...+||++++++.++++++ +++++++||||+. .|+.+|+++|+.+
T Consensus 80 ~~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 80 FKNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred HHHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 13456889999863 2222 1235889999999999999 9999999999997 5999999999987
Q ss_pred EE
Q psy4436 149 IH 150 (171)
Q Consensus 149 i~ 150 (171)
+.
T Consensus 159 ~~ 160 (166)
T TIGR01664 159 KY 160 (166)
T ss_pred CC
Confidence 64
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-21 Score=144.88 Aligned_cols=95 Identities=8% Similarity=0.047 Sum_probs=84.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc-eee-----EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-HKE-----IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd-~~~-----~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++||+.++|+.|+ ++++|+||++. ..+...++.+++..+|+ .+. ...||+|+.|..++++++++|++
T Consensus 86 ~~~~~~gv~~~L~~L~---~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 161 (221)
T PRK10563 86 ELEPIAGANALLESIT---VPMCVVSNGPV-SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVEN 161 (221)
T ss_pred cCCcCCCHHHHHHHcC---CCEEEEeCCcH-HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHH
Confidence 4678999999999993 89999999987 77788999999999995 331 23489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
|+||||+..|+.+|+++|+.++++.
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~ 186 (221)
T PRK10563 162 CILVDDSSAGAQSGIAAGMEVFYFC 186 (221)
T ss_pred eEEEeCcHhhHHHHHHCCCEEEEEC
Confidence 9999999999999999999999885
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-21 Score=143.42 Aligned_cols=99 Identities=14% Similarity=0.206 Sum_probs=88.7
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-----eEecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
..+++|++.+.|+.|++. ++++++||+.. ......+..+|+..+|+.+ .+..||.+++|+.+++++|++|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~-~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGAR-PHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCCh-HHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478899999999999999 99999999866 6677799999999999987 2245999999999999999999999
Q ss_pred EEEcCCccc-ccccccCCceEEEeCCC
Q psy4436 129 VFFDDEERN-SHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~~d-i~~a~~~G~~~i~v~~g 154 (171)
+||||+..+ +.+|+++|+++|++..+
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCC
Confidence 999999995 59999999999998653
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-21 Score=142.94 Aligned_cols=94 Identities=11% Similarity=0.116 Sum_probs=82.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|++. ++++++||++. . ++..|+..+|+.+.. ..||++.+|..++++++++|++|
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 467889999999999975 99999999866 3 467899999987732 34899999999999999999999
Q ss_pred EEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
+||||+. .|+.+|+++|+.++++..+
T Consensus 184 ~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 184 LHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 9999995 8999999999999999653
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-20 Score=131.32 Aligned_cols=118 Identities=13% Similarity=0.130 Sum_probs=96.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCC-CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYR-DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
.+|++|||+||||+|..++. ...+.+..-|. -=...++.|+++|++++|+||++. ..++..++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~--------------~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~-~~~~~~l~~ 70 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVI--------------NDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKS-GAVRHRAEE 70 (169)
T ss_pred cCeEEEEeCceeeECCeEEE--------------cCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCc-HHHHHHHHH
Confidence 48999999999999976542 22333332222 223468999999999999999988 788889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+++..+|+.. +|||..++.++++++++++++++|||+.+|+.+++.+|+..+.-
T Consensus 71 lgi~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 71 LKIKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred CCCcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 9999888753 68888899999999999999999999999999999999765443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-20 Score=131.25 Aligned_cols=121 Identities=11% Similarity=0.145 Sum_probs=95.0
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|+||+||||+++++..... ......+.+.++. +|+.|+++|++++|+||++. ..+...+++++
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~-----------~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~-~~~~~~l~~~g 66 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNN-----------GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKA-KLVEDRCKTLG 66 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCC-----------CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCC-HHHHHHHHHcC
Confidence 5899999999999866531100 0000112222332 89999999999999999988 67777999999
Q ss_pred cccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 96 WNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 96 l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+..+|+. .+||++.++++++++++++++++||||+.+|+.+++++|+. +.+.++.
T Consensus 67 i~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 67 ITHLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAH 121 (154)
T ss_pred CCEEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcC
Confidence 9988764 36788999999999999999999999999999999999996 7776553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=140.59 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=107.8
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc-------------
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT------------- 82 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~------------- 82 (171)
.|+++||.||||+...... ..........++||+.++|+.|+++|++++|+||++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~------------y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~ 69 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTD------------FQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFD 69 (354)
T ss_pred CcEEEEeCCCCccCCCCcc------------ccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHh
Confidence 5789999999998743321 122234568999999999999999999999999951
Q ss_pred --hhHHHHHHHHhcCcccccceee----------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 83 --EMLRAHQLVDLFNWNQHFDHKE----------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 83 --~~~~~~~~l~~~~l~~~fd~~~----------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
. ......++.+++. |+.+. .+.||++.++..++++++++|++++||||+..|+.+|+++|+.+++
T Consensus 70 ~~~-~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 70 PPH-NLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred hHH-HHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 2 3455577788874 54331 1448999999999999999999999999999999999999999999
Q ss_pred e-CCCCcHHHHHHHHH
Q psy4436 151 V-KDGMSHSVLHKGLK 165 (171)
Q Consensus 151 v-~~g~~~~~~~~~~~ 165 (171)
+ +.+.+++++.+.|.
T Consensus 147 v~~~~~~~~~i~~~l~ 162 (354)
T PRK05446 147 YARETLNWDAIAEQLT 162 (354)
T ss_pred EECCCCCHHHHHHHHh
Confidence 9 45778888776654
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-20 Score=135.59 Aligned_cols=100 Identities=21% Similarity=0.256 Sum_probs=79.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc----ceeeE--ecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF----DHKEI--FPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f----d~~~~--~~~~k~~~~~~~~~~~~~~~~ 126 (171)
....++||+.++|+.|++. ++++++||.+. ......++.+++..+| +.+.. ..+|||+.|..++++++ |+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~-~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 71 RYLSAYDDALDVINKLKED-YDFVAVTALGD-SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred HhccCCCCHHHHHHHHHhc-CCEEEEeCCcc-chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 3466899999999999987 46788888765 4444466677776544 44422 23778899999999999 89
Q ss_pred cEEEEcCCcccccccccC--CceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPL--GVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~--G~~~i~v~~g~~ 156 (171)
+++||||+..|+.+|+++ |+.++++.+|..
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 999999999999999999 999999988863
|
2 hypothetical protein; Provisional |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-20 Score=153.75 Aligned_cols=100 Identities=17% Similarity=0.224 Sum_probs=88.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..+++||+.++|+.|+++|++++|+||++. ..+...++++++..||+.+.. ..+|||..|..+++++ +|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~-~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLT-EYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 457899999999999999999999999988 888889999999999988722 2357888899999876 478999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCc
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|||+..|+.+|+++|+.++++.++..
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~ 431 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFA 431 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCC
Confidence 999999999999999999999987653
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.8e-20 Score=142.76 Aligned_cols=120 Identities=24% Similarity=0.286 Sum_probs=101.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh-
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL- 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~- 93 (171)
.+|+||||+|+|||..-+.+.... ......+++++.++|+.|+++|++++|+|+++. ..+...++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~------------~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~ 68 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGID------------NLNLSPLHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERR 68 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCcc------------ccccCccHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhC
Confidence 479999999999998655432110 001224689999999999999999999999988 778889999
Q ss_pred ---cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 94 ---FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 94 ---~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
+++..+|+.+....+||+..+..+++++|+++++++||||++.|+..+++.+..
T Consensus 69 ~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 69 KDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 899999999877779999999999999999999999999999999999996653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-20 Score=162.30 Aligned_cols=105 Identities=17% Similarity=0.212 Sum_probs=93.2
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc-cccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~-~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
.++||+.++|+.|+++|++++|+||+.. ..+...++++++. .+|+.+.. ..||+|++|..++++++++|++|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~-~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADR-IKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 4699999999999999999999999987 7778889999996 78887722 248999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCcHHHHH
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMSHSVLH 161 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~~ 161 (171)
||||+..|+.+|+++|+.++++.++...+++.
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~ 271 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSEEILK 271 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCHHHHh
Confidence 99999999999999999999999887655443
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-20 Score=136.24 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=85.5
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc---Cccccccee---eEecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHK---EIFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~---~l~~~fd~~---~~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
....++||+.++|+.|+++|++++|+||++. ...+..+++. ++..+|+.. ...+||+++.|.+++++++++|+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~-~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSV-PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChh
Confidence 4557999999999999999999999999987 6566566664 555555433 23469999999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+++||||+..|+.+|+++|+.++++.++
T Consensus 171 e~lfVgDs~~Di~AA~~AG~~ti~v~r~ 198 (220)
T TIGR01691 171 EILFLSDIINELDAARKAGLHTGQLVRP 198 (220)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEEECC
Confidence 9999999999999999999999998553
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=123.41 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=99.0
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
+++||+||||++....... .....+++++.++|+.|+++|++++++||+.. .....+++.+++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~ 64 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLD 64 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCc
Confidence 4899999999986654321 33568899999999999999999999999987 7788899999986
Q ss_pred cccceeeE-----ec----------------CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 98 QHFDHKEI-----FP----------------GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 98 ~~fd~~~~-----~~----------------~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
.+|+.+.. .. +|++..+..++++++.++++++||||+..|+.+++++|+.++++
T Consensus 65 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 65 DYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred hhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 66654311 11 78899999999999999999999999999999999999998864
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-20 Score=136.48 Aligned_cols=135 Identities=11% Similarity=0.014 Sum_probs=97.0
Q ss_pred cCCc-EEEEeCCCCCCCceeccccCCc-ceec--------C--ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCC
Q psy4436 14 KFPK-LAVFDLDHTLWPFHVYIDVIPP-FKKI--------G--DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81 (171)
Q Consensus 14 ~~~k-~vvfDlDgTL~~~~~~~~~~~~-~~~~--------~--~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~ 81 (171)
..++ +|+||+||||+|+......+.+ +.+. . ..+.........+.+++.++|+.|+++|++++++||+
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 3344 8999999999987664222221 1111 0 1222222334566777999999999999999999998
Q ss_pred ----chhHHHHHHHHhcCcccccceeeE---e--cCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 82 ----TEMLRAHQLVDLFNWNQHFDHKEI---F--PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 82 ----~~~~~~~~~l~~~~l~~~fd~~~~---~--~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
.. ..+..+++.+|+..+|+.+.. . +||.+ . .+++++++ ++||||+..|+.+|+++|+.++.+.
T Consensus 140 ~~~k~~-~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~--~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~ 211 (237)
T TIGR01672 140 TPGKTD-TVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTK--T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CCCcCH-HHHHHHHHHhCCchheeEEECCCCCCCCCCCH--H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEE
Confidence 44 577878889999999876622 1 24444 3 35566665 7999999999999999999999998
Q ss_pred CCCc
Q psy4436 153 DGMS 156 (171)
Q Consensus 153 ~g~~ 156 (171)
+|++
T Consensus 212 ~g~~ 215 (237)
T TIGR01672 212 RASN 215 (237)
T ss_pred ecCC
Confidence 8764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.7e-20 Score=128.14 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=79.1
Q ss_pred CCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee----EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 52 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE----IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 52 ~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~----~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
......+||+.++|+.|+++|++++++||++. ......++.+ +..+|+.+. ..+||+++.|.+++++++++| +
T Consensus 60 ~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~ 136 (154)
T TIGR01549 60 DAEEAYIRGAADLLKRLKEAGIKLGIISNGSL-RAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-E 136 (154)
T ss_pred chhheeccCHHHHHHHHHHCcCeEEEEeCCch-HHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-C
Confidence 34566789999999999999999999999988 6677788887 777887652 225899999999999999999 9
Q ss_pred EEEEcCCcccccccccCC
Q psy4436 128 MVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G 145 (171)
++||||+..|+.+|+++|
T Consensus 137 ~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 137 VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEEeCCHHHHHHHHHcc
Confidence 999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-20 Score=135.86 Aligned_cols=143 Identities=18% Similarity=0.219 Sum_probs=100.8
Q ss_pred CCCcccccCCcEEEEeCCCCCCCceeccccC----C----------------ccee--------cC------ceeeccCC
Q psy4436 7 KLDPSVKKFPKLAVFDLDHTLWPFHVYIDVI----P----------------PFKK--------IG------DKVLDAGG 52 (171)
Q Consensus 7 ~~~~~~~~~~k~vvfDlDgTL~~~~~~~~~~----~----------------~~~~--------~~------~~~~~~~~ 52 (171)
.....+..++|+|+|||||||++......+. . ++.. .. ..+...
T Consensus 3 ~~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (224)
T PLN02954 3 KDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEK-- 80 (224)
T ss_pred HHHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH--
Confidence 3344455668999999999999865532211 1 1100 00 000111
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc--ccccee---------e--------EecCCcHHH
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHK---------E--------IFPGQKTTH 113 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~--~~fd~~---------~--------~~~~~k~~~ 113 (171)
....++||+.++|+.|+++|++++|+|++.. ..+...++.+++. .+|+.. . ...++|+..
T Consensus 81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~ 159 (224)
T PLN02954 81 RPPRLSPGIPELVKKLRARGTDVYLVSGGFR-QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEA 159 (224)
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHH
Confidence 1245899999999999999999999999988 7788899999986 355321 0 012568888
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 114 ~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+++++++++. ++++||||+.+|+.+|+++|+.++...++
T Consensus 160 i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~ 198 (224)
T PLN02954 160 VQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG 198 (224)
T ss_pred HHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence 9999988874 69999999999999999888876655443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-19 Score=122.68 Aligned_cols=111 Identities=20% Similarity=0.153 Sum_probs=95.6
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|.|++|+|+||++.- .....|++++.++.+++.|+++.|+||+++ ..+..+.++++
T Consensus 28 ikgvi~DlDNTLv~wd----------------------~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e-~RV~~~~~~l~ 84 (175)
T COG2179 28 IKGVILDLDNTLVPWD----------------------NPDATPELRAWLAELKEAGIKVVVVSNNKE-SRVARAAEKLG 84 (175)
T ss_pred CcEEEEeccCceeccc----------------------CCCCCHHHHHHHHHHHhcCCEEEEEeCCCH-HHHHhhhhhcC
Confidence 6899999999997621 234578999999999999999999999987 66666899999
Q ss_pred cccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCC
Q psy4436 96 WNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 96 l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~ 153 (171)
++.+ ....||-+..|.+++++++++++++++|||..- |+.+++.+|+.+|.|..
T Consensus 85 v~fi----~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 85 VPFI----YRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred Ccee----ecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 7722 233478888899999999999999999999999 99999999999999964
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=132.38 Aligned_cols=100 Identities=14% Similarity=0.155 Sum_probs=83.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----e----------cCCcHHHHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----F----------PGQKTTHFANLK 118 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~----------~~~k~~~~~~~~ 118 (171)
...++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..+|+.... . +.+|+..+++++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIM-CLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 467899999999999999999999999987 778889999998877753311 1 134557889999
Q ss_pred HHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 119 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 119 ~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+++++++++++||||+.+|+.+|+.+|+.++..+.+
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 999999999999999999999999999977665543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.9e-19 Score=127.83 Aligned_cols=118 Identities=14% Similarity=0.170 Sum_probs=92.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCC-HHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRD-VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
.+|+|+||+||||++..++... .+.....+.- =...++.|+++|++++|+||++. ..+...++.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~--------------~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~-~~v~~~l~~ 84 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGN--------------NGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKS-KLVEDRMTT 84 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcC--------------CCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHH
Confidence 3899999999999986543110 1111111111 12578889999999999999988 777889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+++..+|+. .++|+..++++++++++++++++||||+.+|+.+++++|+.+ .+.
T Consensus 85 lgl~~~f~g----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~ 138 (183)
T PRK09484 85 LGITHLYQG----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVA 138 (183)
T ss_pred cCCceeecC----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE-ecC
Confidence 999888763 356788899999999999999999999999999999999984 454
|
|
| >KOG3085|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.6e-19 Score=130.51 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=90.4
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-----eEecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....+.+++.+++++|++.|+.++++||-.. ..+..+..+++..+||.+ .+..||+|++|+.+++++++.|++
T Consensus 110 ~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~--r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee 187 (237)
T KOG3085|consen 110 SAWKYLDGMQELLQKLRKKGTILGIISNFDD--RLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE 187 (237)
T ss_pred cCceeccHHHHHHHHHHhCCeEEEEecCCcH--HHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH
Confidence 3567788999999999999999999999754 456789999999999877 345699999999999999999999
Q ss_pred EEEEcCCcc-cccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEER-NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~-di~~a~~~G~~~i~v~~g~~ 156 (171)
|++|||+.. |+.+|+++||+++.|.+..+
T Consensus 188 ~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 188 CVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred eEEecCccccccHhHHHcCCEEEEEccccc
Confidence 999999999 59999999999999976554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-18 Score=132.37 Aligned_cols=129 Identities=18% Similarity=0.165 Sum_probs=104.0
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
.+++++||+||||.+..... ++.. . ......++|++.++|+.|+++|++++++||++. ......++.+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~----~~~~-----~--~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~-~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS----PYDW-----T--KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDG-VCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC----ccch-----h--hcccCCCChhHHHHHHHHHhCCCEEEEEeCCCh-hhHHHHHHHH
Confidence 35799999999998632210 0000 0 012346799999999999999999999999988 7788899999
Q ss_pred Cccc-ccceeeEe------------cCCcHHHHHHHHHHhCC-CCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 95 NWNQ-HFDHKEIF------------PGQKTTHFANLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 95 ~l~~-~fd~~~~~------------~~~k~~~~~~~~~~~~~-~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++.. +|+.+.+. .+|+|..+..++++++. +++++++|||+..|+.+|+++|+.+++|.||.
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 9986 78765222 28889999999999988 68999999999999999999999999998873
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-18 Score=135.84 Aligned_cols=135 Identities=17% Similarity=0.164 Sum_probs=100.9
Q ss_pred CCcEEEEeCCCCCCCceeccccCC--------------------cceec--------C---ceeeccCCCeeeeCCCHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIP--------------------PFKKI--------G---DKVLDAGGAIIKYYRDVPA 63 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~--------------------~~~~~--------~---~~~~~~~~~~~~~~~~v~~ 63 (171)
.+++++|||||||+..++...+.. +|... . ..+++......+++||+.+
T Consensus 109 ~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~~~l~l~pGa~e 188 (322)
T PRK11133 109 TPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVRENLPLMPGLTE 188 (322)
T ss_pred CCCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHHHhCCCChhHHH
Confidence 479999999999996555432110 11100 0 1112222345789999999
Q ss_pred HHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-e--------------EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 64 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-E--------------IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 64 ~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~--------------~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
+|+.|++.|++++|+|++.. .....+++++++...|... + ...++|++.++.+++++|++++++
T Consensus 189 lL~~Lk~~G~~~aIvSgg~~-~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~~~qt 267 (322)
T PRK11133 189 LVLKLQALGWKVAIASGGFT-YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIPLAQT 267 (322)
T ss_pred HHHHHHHcCCEEEEEECCcc-hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCChhhE
Confidence 99999999999999999976 6677788888887644311 0 023689999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEE
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~ 150 (171)
++|||+.+|+.+++.+|+....
T Consensus 268 IaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 268 VAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred EEEECCHHHHHHHHHCCCeEEe
Confidence 9999999999999999986554
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=124.83 Aligned_cols=118 Identities=10% Similarity=-0.010 Sum_probs=93.7
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~ 93 (171)
+|+++||+|||||+ .-.++|++.++++.|+++|++++++||++.. ......+..
T Consensus 1 ~~~v~~DlDGtL~~------------------------~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 1 IKNVICDIDGVLMH------------------------DNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred CcEEEEeCCCceEe------------------------CCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 57899999999977 2256899999999999999999999998662 223334555
Q ss_pred cCccc---------------------------------------------------------------------------
Q psy4436 94 FNWNQ--------------------------------------------------------------------------- 98 (171)
Q Consensus 94 ~~l~~--------------------------------------------------------------------------- 98 (171)
+|+..
T Consensus 57 ~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~ 136 (248)
T PRK10444 57 AGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGA 136 (248)
T ss_pred cCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCC
Confidence 66632
Q ss_pred -----------------------cccee-----eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEE
Q psy4436 99 -----------------------HFDHK-----EIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCI 149 (171)
Q Consensus 99 -----------------------~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i 149 (171)
.+... ....||++.+|+.+++++++++++++||||+. .|+.+|+++|+.++
T Consensus 137 ~~i~~n~D~~~~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~v 216 (248)
T PRK10444 137 RFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI 216 (248)
T ss_pred EEEEECCCCCCCCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEE
Confidence 00000 11238899999999999999999999999997 69999999999999
Q ss_pred EeCCCCcH
Q psy4436 150 HVKDGMSH 157 (171)
Q Consensus 150 ~v~~g~~~ 157 (171)
++.+|.+.
T Consensus 217 lV~~G~~~ 224 (248)
T PRK10444 217 LVLSGVST 224 (248)
T ss_pred EECCCCCC
Confidence 99998754
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.2e-18 Score=131.49 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCcH
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~~ 157 (171)
||++.+|+.+++++++++++++||||+. .|+.+|+++|+.+++|.+|...
T Consensus 230 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~ 280 (311)
T PLN02645 230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 280 (311)
T ss_pred CChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCC
Confidence 7788999999999999999999999998 7999999999999999888753
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=124.46 Aligned_cols=50 Identities=12% Similarity=0.197 Sum_probs=46.8
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++.+|+.+++++++++++++||||+. .|+..|+++|+.++++.+|..
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~ 227 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVT 227 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence 38889999999999999999999999997 699999999999999998875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-17 Score=126.43 Aligned_cols=120 Identities=17% Similarity=0.170 Sum_probs=93.6
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~ 93 (171)
.|+++||+|||||+..-. ...++|++.++|+.|+++|++++++||++.. ......++.
T Consensus 1 ~k~i~~D~DGtl~~~~~~--------------------~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~ 60 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAK--------------------SGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR 60 (257)
T ss_pred CCEEEEeCCCeEEeCCCc--------------------ccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 378999999999762110 1126899999999999999999999997653 124445666
Q ss_pred cCccc---------------------------------------------------------------------------
Q psy4436 94 FNWNQ--------------------------------------------------------------------------- 98 (171)
Q Consensus 94 ~~l~~--------------------------------------------------------------------------- 98 (171)
+|+..
T Consensus 61 ~g~~~~~~~i~ts~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~ 140 (257)
T TIGR01458 61 LGFDISEDEVFTPAPAARQLLEEKQLRPMLLVDDRVLPDFDGIDTSDPNCVVMGLAPEHFSYQILNQAFRLLLDGAKPLL 140 (257)
T ss_pred cCCCCCHHHeEcHHHHHHHHHHhcCCCeEEEECccHHHHhccCCCCCCCEEEEecccCccCHHHHHHHHHHHHcCCCCEE
Confidence 66543
Q ss_pred ---------------------cccee--------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceE
Q psy4436 99 ---------------------HFDHK--------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTC 148 (171)
Q Consensus 99 ---------------------~fd~~--------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~ 148 (171)
+|+.+ ....||++.+|+.++++++++|++++||||+. .|+.+|+++|+.+
T Consensus 141 iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 220 (257)
T TIGR01458 141 IAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRG 220 (257)
T ss_pred EEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeE
Confidence 11111 11248899999999999999999999999997 7999999999999
Q ss_pred EEeCCCC
Q psy4436 149 IHVKDGM 155 (171)
Q Consensus 149 i~v~~g~ 155 (171)
+++.+|.
T Consensus 221 i~v~~G~ 227 (257)
T TIGR01458 221 IQVRTGK 227 (257)
T ss_pred EEECCCC
Confidence 9998885
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-17 Score=117.05 Aligned_cols=131 Identities=15% Similarity=-0.010 Sum_probs=93.0
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecC-ce-e--eccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIG-DK-V--LDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
+++|+|+||||++........ .-.... .. - .........++||+.++|+.|+ ++++++|+|+++. ..+...++
T Consensus 3 ~~lvldld~tl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~-~~~~~il~ 79 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFKE-WTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLR-MYADPVLD 79 (148)
T ss_pred cEEEEeCCCCeECCCCCcCCC-CCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcH-HHHHHHHH
Confidence 579999999998754311100 000000 00 0 0011235678999999999999 5799999999988 77888999
Q ss_pred hcCccc-ccceee---EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 93 LFNWNQ-HFDHKE---IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 93 ~~~l~~-~fd~~~---~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
.+++.. +|+.+. .+...||. |.+++++++.+|++|++|||+..++.+++++|+..--+
T Consensus 80 ~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f 141 (148)
T smart00577 80 LLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPW 141 (148)
T ss_pred HhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCc
Confidence 999865 456652 22223333 99999999999999999999999999999988755433
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-17 Score=126.10 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=48.9
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCc-HHHHH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS-HSVLH 161 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~-~~~~~ 161 (171)
.||.+.+|..++++++++|++++||||+. .|+.+|+++|+.+++|.+|.. .++++
T Consensus 201 gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~ 257 (279)
T TIGR01452 201 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQ 257 (279)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHH
Confidence 38888999999999999999999999995 799999999999999999875 44444
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=116.23 Aligned_cols=124 Identities=14% Similarity=0.101 Sum_probs=96.6
Q ss_pred CCcEEEEeCCCCCCCcee-ccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh---------
Q psy4436 15 FPKLAVFDLDHTLWPFHV-YIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--------- 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--------- 84 (171)
..++++||.||||..... +.+ ..+.+.+.|++.+++..|++.|++++++||.+--
T Consensus 4 ~~k~lflDRDGtin~d~~~yv~---------------~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~ 68 (181)
T COG0241 4 DQKALFLDRDGTINIDKGDYVD---------------SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEAD 68 (181)
T ss_pred CCcEEEEcCCCceecCCCcccC---------------cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHH
Confidence 478999999999985443 211 2246788999999999999999999999993211
Q ss_pred -----HHHHHHHHhcCcccccceee----------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 85 -----LRAHQLVDLFNWNQHFDHKE----------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 85 -----~~~~~~l~~~~l~~~fd~~~----------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
......++..|.. |+.+. .+.||++.+++.+++++++++++.++|||+..|+++|.++|+..+
T Consensus 69 f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~ 146 (181)
T COG0241 69 FDKLHNKMLKILASQGVK--IDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGV 146 (181)
T ss_pred HHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCce
Confidence 2234455555542 44442 245999999999999999999999999999999999999999988
Q ss_pred EeCCCC
Q psy4436 150 HVKDGM 155 (171)
Q Consensus 150 ~v~~g~ 155 (171)
.+..+.
T Consensus 147 ~~~~~~ 152 (181)
T COG0241 147 LVLTGI 152 (181)
T ss_pred EEEcCc
Confidence 886543
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-18 Score=124.05 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=72.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----e-EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----E-IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----~-~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+ +++|+||++. ......++++++..+|+.+ + ...||+|+.|+.+++++|++|++|
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASH-WAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCH-HHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 4568999999998 3899999988 7778899999999999865 1 345999999999999999999999
Q ss_pred EEEcCCcccccccccC
Q psy4436 129 VFFDDEERNSHDVSPL 144 (171)
Q Consensus 129 l~vgD~~~di~~a~~~ 144 (171)
+||||+.+|+.+|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-17 Score=118.81 Aligned_cols=91 Identities=9% Similarity=0.083 Sum_probs=75.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEe---------------------c----C
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------------P----G 108 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~---------------------~----~ 108 (171)
..+++|++.++|+.|+++|++++++||+.. ......++.+++..+|+.+... + .
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGND-FFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 367899999999999999999999999987 6777789999999888765210 1 2
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceE
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
.|++.++++.+++ +++++||||+.+|+.+|+++++.+
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 4677788777654 899999999999999999987643
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-17 Score=118.50 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=94.6
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhH---------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML--------- 85 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~--------- 85 (171)
-+|+|++|+|.||+.-|+.....+ ..+...-...+.|+...++++|++.|++++|+|-+.+..
T Consensus 42 GIk~Va~D~DnTlI~~HsgG~~~~--------~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~ 113 (219)
T PTZ00445 42 GIKVIASDFDLTMITKHSGGYIDP--------DNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRY 113 (219)
T ss_pred CCeEEEecchhhhhhhhcccccCC--------CcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcce
Confidence 379999999999987555432100 000001122457889999999999999999999887633
Q ss_pred -----HHHHHHHhcCcc----ccccee------------eEecCCcHHH--H--HHHHHHhCCCCCcEEEEcCCcccccc
Q psy4436 86 -----RAHQLVDLFNWN----QHFDHK------------EIFPGQKTTH--F--ANLKKATGIEYKDMVFFDDEERNSHD 140 (171)
Q Consensus 86 -----~~~~~l~~~~l~----~~fd~~------------~~~~~~k~~~--~--~~~~~~~~~~~~~~l~vgD~~~di~~ 140 (171)
.+...++..+-. ..|.+. ....||.|+. | +++++++|++|++++||||+..||.+
T Consensus 114 Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVea 193 (219)
T PTZ00445 114 ISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKN 193 (219)
T ss_pred echHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHH
Confidence 455566644322 122111 1123777766 7 99999999999999999999999999
Q ss_pred cccCCceEEEeCC
Q psy4436 141 VSPLGVTCIHVKD 153 (171)
Q Consensus 141 a~~~G~~~i~v~~ 153 (171)
|+++|++++++.+
T Consensus 194 A~~lGi~ai~f~~ 206 (219)
T PTZ00445 194 ALKEGYIALHVTG 206 (219)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999975
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.8e-17 Score=119.33 Aligned_cols=103 Identities=10% Similarity=0.076 Sum_probs=85.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee---e--E--ecCCcHHHHHHHHHHhC---C
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---E--I--FPGQKTTHFANLKKATG---I 123 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~---~--~--~~~~k~~~~~~~~~~~~---~ 123 (171)
...++||+.++|+.|+++|++++|+||+.........++..++..+|+.+ + . ..||+|++|..++++++ +
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 45679999999999999999999999987622333334445677788765 2 2 24899999999999997 9
Q ss_pred CCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 124 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 124 ~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|++|+||||+..|+.+|+++|+.++++.++..
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~ 188 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRL 188 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEEeCCCC
Confidence 999999999999999999999999999987654
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-16 Score=119.90 Aligned_cols=132 Identities=13% Similarity=0.038 Sum_probs=91.5
Q ss_pred EEEEeCCCCCCCceeccccC-Cccee-------c-C--ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc---h
Q psy4436 18 LAVFDLDHTLWPFHVYIDVI-PPFKK-------I-G--DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT---E 83 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~-~~~~~-------~-~--~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~---~ 83 (171)
+|+||+|||++++..+...+ ..|.+ . . ............++||+.++|+.|+++|++++++||++ .
T Consensus 65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~ 144 (237)
T PRK11009 65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT 144 (237)
T ss_pred EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 89999999999743322111 11111 0 1 11112223456789999999999999999999999964 2
Q ss_pred hHHHHHHHHhcCc--ccccceeeEe---cCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 84 MLRAHQLVDLFNW--NQHFDHKEIF---PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 84 ~~~~~~~l~~~~l--~~~fd~~~~~---~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
...+..+++.+++ ..+|+.+... .|+.+. ..++++++ ++||||+..|+.+|+++|+.++.+.+|++
T Consensus 145 ~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~---~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 145 ETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKT---QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred HHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHH---HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 2466666667999 6777655222 234442 24455555 99999999999999999999999998775
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.8e-17 Score=120.96 Aligned_cols=95 Identities=7% Similarity=0.028 Sum_probs=74.0
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--cc--cee-----eEecCCcHHH----------
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HF--DHK-----EIFPGQKTTH---------- 113 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--~f--d~~-----~~~~~~k~~~---------- 113 (171)
....++||+.++|+.|+++|++++|+||+.. ..+...++++ +.. ++ +.. ....+|.|..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 148 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCC 148 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCc
Confidence 4578999999999999999999999999988 7788889887 543 22 111 1122444322
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 114 ~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
...++++++.++++++||||+..|+.+|+++|+.+.
T Consensus 149 K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 149 KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 357888899999999999999999999999999433
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.1e-16 Score=117.27 Aligned_cols=55 Identities=13% Similarity=0.222 Sum_probs=49.6
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCCc-HHHHH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMS-HSVLH 161 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~-~~~~~ 161 (171)
.||.+.+|+.+++.++.+++++++|||+.. |+..|+++|+.+++|..|.+ .+++.
T Consensus 189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~ 245 (269)
T COG0647 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLD 245 (269)
T ss_pred CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhh
Confidence 488899999999999999999999999999 99999999999999998876 44443
|
|
| >KOG3109|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-16 Score=114.31 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=84.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----------ecCCcHHHHHHHHHHhC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----------FPGQKTTHFANLKKATG 122 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----------~~~~k~~~~~~~~~~~~ 122 (171)
.+++-+-.+.+|-.|+..+ .++.||... .-+...++++|+.+.|+.+.. +.||.+++|+.+++..|
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~ag 174 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAG 174 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhC
Confidence 3677778889998898775 889999988 666669999999999987722 23888999999999999
Q ss_pred CC-CCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 123 IE-YKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 123 ~~-~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
++ |++++||+|+.+|+.+|++.|++++++..
T Consensus 175 i~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 175 IDSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred CCCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 98 99999999999999999999999999854
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-16 Score=108.05 Aligned_cols=117 Identities=18% Similarity=0.231 Sum_probs=94.9
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHH--HHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVP--AILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
++|+++||+||||+|...+ ++..++.++.|. +. --|+.|.+.|++++|+|+... ..++...+
T Consensus 7 ~IkLli~DVDGvLTDG~ly--------------~~~~Gee~KaFn-v~DG~Gik~l~~~Gi~vAIITGr~s-~ive~Ra~ 70 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLY--------------YDENGEEIKAFN-VRDGHGIKLLLKSGIKVAIITGRDS-PIVEKRAK 70 (170)
T ss_pred hceEEEEeccceeecCeEE--------------EcCCCceeeeee-ccCcHHHHHHHHcCCeEEEEeCCCC-HHHHHHHH
Confidence 5899999999999986554 333444444433 22 258899999999999999987 77788999
Q ss_pred hcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 93 LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 93 ~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
.+|+..+|..+ ..|...|+.+++++++.++++.|+||..+|+....++|..++..
T Consensus 71 ~LGI~~~~qG~----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~ 125 (170)
T COG1778 71 DLGIKHLYQGI----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA 125 (170)
T ss_pred HcCCceeeech----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc
Confidence 99999666544 44778899999999999999999999999999999999865543
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-16 Score=115.41 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=73.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee---------eEecCCcHHHHHHHHHHhCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------EIFPGQKTTHFANLKKATGI 123 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~---------~~~~~~k~~~~~~~~~~~~~ 123 (171)
....++||+.++|+.|+++ ++++|+||+.. ..++..++++++..+|+.. .....++|.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFY-EFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcH-HHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 3567899999999999999 99999999988 7888899999998877532 01112233335566666777
Q ss_pred CCCcEEEEcCCcccccccccCCceE
Q psy4436 124 EYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 124 ~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
.+++++||||+.+|+.+++++|+..
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 7899999999999999999999744
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-15 Score=125.34 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=90.0
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeee-eCCCHHHHHHHHhhCCcEEEEEcCCchh---------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIK-YYRDVPAILKYLKQNNCLVAAASRTTEM--------- 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~l~~L~~~g~~i~i~S~~~~~--------- 84 (171)
..|+++||+||||+...+... +-.....+. ++|++.+.|+.|+++|++++|+||.+..
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~------------~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKV------------FPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred cCcEEEEECCCCccccCCCcc------------CCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 458999999999986432110 111122344 5899999999999999999999997551
Q ss_pred --HHHHHHHHhcCccccccee-----eEecCCcHHHHHHHHHHhC----CCCCcEEEEcCCcccccccccCCc
Q psy4436 85 --LRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATG----IEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 85 --~~~~~~l~~~~l~~~fd~~-----~~~~~~k~~~~~~~~~~~~----~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
..+..+++.+++. |+.+ ..+.||++.++..++++++ +++++++||||+..|+.+++++|-
T Consensus 235 ~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 235 FKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 2356688888876 6644 2245999999999999985 899999999999999888777664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.62 E-value=7e-15 Score=110.92 Aligned_cols=129 Identities=9% Similarity=-0.052 Sum_probs=94.4
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHH--HHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH--QLV 91 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~--~~l 91 (171)
..+++++||+||||++ ...++||+.++|++|+++|++++++||+++ .... ..+
T Consensus 6 ~~~~~~~~D~dG~l~~------------------------~~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L 60 (242)
T TIGR01459 6 NDYDVFLLDLWGVIID------------------------GNHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTL 60 (242)
T ss_pred hcCCEEEEeccccccc------------------------CCccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHH
Confidence 3588999999999976 445699999999999999999999999877 4333 588
Q ss_pred HhcCccc-ccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc---------eEEEeCCC----CcH
Q psy4436 92 DLFNWNQ-HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV---------TCIHVKDG----MSH 157 (171)
Q Consensus 92 ~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~---------~~i~v~~g----~~~ 157 (171)
+++++.. +|+.+.....-....+..++++++++++++++|||+..|+.....+|. ..+.+... ++.
T Consensus 61 ~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~ 140 (242)
T TIGR01459 61 KSLGINADLPEMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRSENEKLDL 140 (242)
T ss_pred HHCCCCccccceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCCCcccCCH
Confidence 9999987 887763211111245667777888999999999999887766555443 22344322 556
Q ss_pred HHHHHHHHHh
Q psy4436 158 SVLHKGLKQW 167 (171)
Q Consensus 158 ~~~~~~~~~~ 167 (171)
..+.+.++.+
T Consensus 141 ~~~~~~l~~l 150 (242)
T TIGR01459 141 DEFDELFAPI 150 (242)
T ss_pred HHHHHHHHHH
Confidence 6666666554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG2914|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.1e-16 Score=115.11 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=85.4
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC-cccccceeeE-------ecCCcHHHHHHHHHHhCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN-WNQHFDHKEI-------FPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~-l~~~fd~~~~-------~~~~k~~~~~~~~~~~~~~ 124 (171)
....+.||+.++++.|+.+|++++++|+++. ......+..++ +...|+.... .+||.|.+|..+++.++..
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~-~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~ 167 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTS-ASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVP 167 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCc-ccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCC
Confidence 4567899999999999999999999999977 66666777766 5555654411 2388999999999999999
Q ss_pred C-CcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 125 Y-KDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 125 ~-~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
| +.|++|+|+...+++|+++|++++.+++
T Consensus 168 ~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 168 PPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 9 9999999999999999999999999976
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.3e-16 Score=113.89 Aligned_cols=137 Identities=18% Similarity=0.202 Sum_probs=101.9
Q ss_pred cCCcEEEEeCCCCCCCceeccccCC-------------------------------cceecCceeeccCCCe-eeeCCCH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIP-------------------------------PFKKIGDKVLDAGGAI-IKYYRDV 61 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~-~~~~~~v 61 (171)
.++++++|||||||++.++...+.. +++.......+..... ..+.|++
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~~~l~~ga 82 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEFLRLTPGA 82 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhcCcCCccH
Confidence 3578999999999999554432111 0111111111122234 7899999
Q ss_pred HHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----eE----------e-cCCcHHHHHHHHHHhCCCCC
Q psy4436 62 PAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----EI----------F-PGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 62 ~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----~~----------~-~~~k~~~~~~~~~~~~~~~~ 126 (171)
.++++.+++.|++++|+|++.. ..+..+.+.+|++..+... ++ + .+.|....+.+++++|++++
T Consensus 83 ~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~ 161 (212)
T COG0560 83 EELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLE 161 (212)
T ss_pred HHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCCHH
Confidence 9999999999999999999988 8889999999999766322 10 1 13467889999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEe
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+++++||+.+|+.+.+.+|.....-
T Consensus 162 ~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 162 ETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred HeEEEcCchhhHHHHHhCCCCeEeC
Confidence 9999999999999999999654443
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.59 E-value=8e-15 Score=103.85 Aligned_cols=114 Identities=21% Similarity=0.132 Sum_probs=87.7
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCc--EEEEEcCCc------hhHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNC--LVAAASRTT------EMLR 86 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~--~i~i~S~~~------~~~~ 86 (171)
-+|++|||+|+||+..+. .++.|.+.+.++++++.+. +++|+||+. ....
T Consensus 40 Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~ 97 (168)
T PF09419_consen 40 GIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGER 97 (168)
T ss_pred CceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHH
Confidence 489999999999976333 3457889999999999976 499999983 1255
Q ss_pred HHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCC-----CCCcEEEEcCCcc-cccccccCCceEEEeCCCC
Q psy4436 87 AHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGI-----EYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 87 ~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~-----~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~ 155 (171)
++.+.+.+++.. |.+ ...|| ..+..+++.++. +|+++++|||+.. |+-.|...|+.++++++|.
T Consensus 98 a~~~~~~lgIpv-l~h--~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 98 AEALEKALGIPV-LRH--RAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHHHHHhhCCcE-EEe--CCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 666777888661 111 12355 446677766654 5999999999999 9999999999999998875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-15 Score=108.80 Aligned_cols=91 Identities=11% Similarity=0.131 Sum_probs=74.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-e-------E-------e--cCCcHHHHH
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-E-------I-------F--PGQKTTHFA 115 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~-------~-------~--~~~k~~~~~ 115 (171)
....+.|++.++++.++++|++++|+|++.. ..++.+++.+++..+|... . . . ...|+..++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 3456789999999999999999999999987 7888899999988766422 0 0 1 134667888
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccC
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~ 144 (171)
.+++++++++++++||||+.+|+.+++.+
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88889999999999999999999988753
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.4e-16 Score=112.60 Aligned_cols=96 Identities=15% Similarity=0.181 Sum_probs=80.6
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccce-eeE---------------ecCCcHHHHHHHHH
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEI---------------FPGQKTTHFANLKK 119 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~-~~~---------------~~~~k~~~~~~~~~ 119 (171)
.++|++.++++.++++|++++|+|+++. ..++.+++.+++..+|.. ... ..++|...++.+++
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~-~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLT-ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 5799999999999999999999999988 788889999999887754 110 11446677899999
Q ss_pred HhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 120 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 120 ~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+.++++++++++||+..|+.+++.+|..++.-+
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 999999999999999999999999997665443
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >KOG2882|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-14 Score=107.32 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=49.8
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCC-cHHHHHHH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGM-SHSVLHKG 163 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~-~~~~~~~~ 163 (171)
.||.+.++..++++++++|++++||||+.+ |+..++++|++++++-.|. +.+++++.
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhc
Confidence 378889999999999999999999999999 9999999999999996664 45555544
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-14 Score=106.70 Aligned_cols=87 Identities=13% Similarity=0.052 Sum_probs=77.0
Q ss_pred eCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE----ecCCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 57 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----FPGQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 57 ~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~----~~~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
+.+++.++|+.|+++|++++|+||++. ..+...++.+|+..+|+.+.. ..||+|+.|.+++++++++++++++||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPR-KDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 445569999999999999999999988 778889999999999987621 238999999999999999999999999
Q ss_pred CCcccccccccC
Q psy4436 133 DEERNSHDVSPL 144 (171)
Q Consensus 133 D~~~di~~a~~~ 144 (171)
|+.+|+.+|+++
T Consensus 186 D~~~Di~aA~~a 197 (197)
T TIGR01548 186 DTVDDIITGRKA 197 (197)
T ss_pred CCHHHHHHHHhC
Confidence 999999999864
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4e-15 Score=110.26 Aligned_cols=92 Identities=4% Similarity=-0.020 Sum_probs=71.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc---ee-----eEecCCcHHHH----------H
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD---HK-----EIFPGQKTTHF----------A 115 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd---~~-----~~~~~~k~~~~----------~ 115 (171)
..+++||+.++++.|+++|++++|+|++.. ..+..+++.++....+- .. ....+|.+..+ .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 468999999999999999999999999977 77777888875433331 11 11224544333 3
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
.++++++..+++++||||+..|+.+|+++|+
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 6677777789999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.54 E-value=4e-14 Score=106.46 Aligned_cols=48 Identities=10% Similarity=0.066 Sum_probs=44.3
Q ss_pred cCCcHHHHHHHHHHhCCCCCcE-EEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 107 PGQKTTHFANLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~-l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
.||++.+|+.++++++++++++ +||||+. .|+.+|+++|+.+++|.+|
T Consensus 187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 4888999999999999999887 9999999 6999999999999999765
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.6e-15 Score=104.58 Aligned_cols=120 Identities=13% Similarity=0.175 Sum_probs=79.3
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeC-CCHHHHHHHHhhCCcEEEEEcCCchh-----------
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEM----------- 84 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~l~~L~~~g~~i~i~S~~~~~----------- 84 (171)
|++.||+||||+....... +........++ |+|.+.|+.|++.||+|+|+||...-
T Consensus 1 Kia~fD~DgTLi~~~s~~~------------f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~ 68 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK------------FPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLEN 68 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT------------S-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHH
T ss_pred CEEEEeCCCCccCCCCCCc------------CcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHH
Confidence 6799999999976443321 11122345555 58999999999999999999995210
Q ss_pred --HHHHHHHHhcCccccccee---eEecCCcHHHHHHHHHHhCC----CCCcEEEEcCC-----------cccccccccC
Q psy4436 85 --LRAHQLVDLFNWNQHFDHK---EIFPGQKTTHFANLKKATGI----EYKDMVFFDDE-----------ERNSHDVSPL 144 (171)
Q Consensus 85 --~~~~~~l~~~~l~~~fd~~---~~~~~~k~~~~~~~~~~~~~----~~~~~l~vgD~-----------~~di~~a~~~ 144 (171)
.....+++.+++...+-.. ..++||++.+++.+++.++. +.++++||||. ..|..-|.++
T Consensus 69 ~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~ 148 (159)
T PF08645_consen 69 FHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNC 148 (159)
T ss_dssp HHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHc
Confidence 3344466667766322111 34679999999999998874 89999999996 4578888889
Q ss_pred CceE
Q psy4436 145 GVTC 148 (171)
Q Consensus 145 G~~~ 148 (171)
|+..
T Consensus 149 gi~f 152 (159)
T PF08645_consen 149 GIKF 152 (159)
T ss_dssp T--E
T ss_pred CCcc
Confidence 8864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-14 Score=106.32 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=71.7
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee---------eE---ecCCcHHHHHHHHHHh
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------EI---FPGQKTTHFANLKKAT 121 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~---------~~---~~~~k~~~~~~~~~~~ 121 (171)
...++||+.++|+.|++.| +++|+|++.. ..+..+++.+|+..+|... .+ ..++.+..+.+.+++.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~-~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCChH-HHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 4578999999999999985 9999999988 7888899999999888521 11 1233333333333555
Q ss_pred CCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 122 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 122 ~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+ .++++|||+.+|+.+++.+|.......
T Consensus 144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred C---CCEEEEeCCHHHHHHHHhCCCCEEecC
Confidence 4 389999999999999999998766654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=102.16 Aligned_cols=106 Identities=13% Similarity=0.194 Sum_probs=82.7
Q ss_pred CeeeeCCCHHHHHHHH--hhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-------------ec--------CC
Q psy4436 53 AIIKYYRDVPAILKYL--KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-------------FP--------GQ 109 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L--~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-------------~~--------~~ 109 (171)
..+++.||+.++++.+ +..|+.++|+|+++. -+...+|++.|+...|+.+.. .| .|
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs-~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANS-FFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcH-hHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4678999999999999 457999999999988 888999999999988755411 01 11
Q ss_pred ----cHHHHHHHHHH---hCCCCCcEEEEcCCcccccccccCCceEEE-eCCCCcHHH
Q psy4436 110 ----KTTHFANLKKA---TGIEYKDMVFFDDEERNSHDVSPLGVTCIH-VKDGMSHSV 159 (171)
Q Consensus 110 ----k~~~~~~~~~~---~~~~~~~~l~vgD~~~di~~a~~~G~~~i~-v~~g~~~~~ 159 (171)
|...++.+++. .|+..++++||||+.+|+.++.+++-.-+. .+.|+....
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~ 204 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHK 204 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHH
Confidence 45666776665 478899999999999999999998875444 466776443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.2e-13 Score=103.20 Aligned_cols=44 Identities=18% Similarity=0.301 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
|+..++++++.++++++++++|||+.+|+.+++.+|+ ++.+.++
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~vamgna 243 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GVAMGNA 243 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eEEecCc
Confidence 4566788889999999999999999999999999996 4445443
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-13 Score=100.99 Aligned_cols=114 Identities=16% Similarity=0.129 Sum_probs=86.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|+||+||||++.. ..+.|...++|++|+++|++++++|+++. ..+...++.++
T Consensus 3 ~kli~~DlDGTLl~~~-----------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~ 58 (230)
T PRK01158 3 IKAIAIDIDGTITDKD-----------------------RRLSLKAVEAIRKAEKLGIPVILATGNVL-CFARAAAKLIG 58 (230)
T ss_pred eeEEEEecCCCcCCCC-----------------------CccCHHHHHHHHHHHHCCCEEEEEcCCch-HHHHHHHHHhC
Confidence 6899999999997621 13457788999999999999999999987 55565677776
Q ss_pred ccc------------------------------------c----------------------------------------
Q psy4436 96 WNQ------------------------------------H---------------------------------------- 99 (171)
Q Consensus 96 l~~------------------------------------~---------------------------------------- 99 (171)
+.. .
T Consensus 59 ~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (230)
T PRK01158 59 TSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGL 138 (230)
T ss_pred CCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCC
Confidence 653 0
Q ss_pred -cce------eeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 100 -FDH------KEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 100 -fd~------~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+.. .+..+ .+|+..++++++.++++++++++|||+.+|+.+++.+|.. +++.++
T Consensus 139 ~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 201 (230)
T PRK01158 139 DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG-VAVANA 201 (230)
T ss_pred cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce-EEecCc
Confidence 000 01111 2467889999999999999999999999999999999975 445443
|
|
| >KOG4549|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.8e-13 Score=88.27 Aligned_cols=127 Identities=31% Similarity=0.407 Sum_probs=107.1
Q ss_pred cccCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 12 ~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
|...|+++.||+|=|||+-+++.++.-||.+...... ..+..+..|++....|..|+++|+.++++|+++.++.+.+.|
T Consensus 1 M~~~p~~~~fdldytiwP~~vdthl~~pfkP~k~~~g-~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L 79 (144)
T KOG4549|consen 1 MAEKPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCECG-SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGL 79 (144)
T ss_pred CCCCCceeEEeccceeeeEEEEecccccccccccCcc-cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHH
Confidence 3446899999999999999999999988888762221 566788999999999999999999999999999999999999
Q ss_pred HhcCcccc---------cceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 92 DLFNWNQH---------FDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 92 ~~~~l~~~---------fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
+.+....- |+++...+..+..+|..+-+..+....+..+++|..++-.
T Consensus 80 ~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesrnke 136 (144)
T KOG4549|consen 80 ETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRNKE 136 (144)
T ss_pred HHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccccCCc
Confidence 99887753 3444445577888999999999999999999999888743
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.6e-13 Score=98.74 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=87.6
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|+||+||||++. ...+.|...++|++|++.|++++++|+++. .......+.++
T Consensus 1 ik~v~~DlDGTLl~~-----------------------~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~-~~~~~~~~~l~ 56 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP-----------------------NRMISERAIEAIRKAEKKGIPVSLVTGNTV-PFARALAVLIG 56 (215)
T ss_pred CcEEEEecCCCcCCC-----------------------CcccCHHHHHHHHHHHHCCCEEEEEcCCcc-hhHHHHHHHhC
Confidence 478999999999752 123567889999999999999999999987 66666777777
Q ss_pred ccc-------------------------------------------------------------------------ccc-
Q psy4436 96 WNQ-------------------------------------------------------------------------HFD- 101 (171)
Q Consensus 96 l~~-------------------------------------------------------------------------~fd- 101 (171)
+.. ++.
T Consensus 57 ~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 136 (215)
T TIGR01487 57 TSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSG 136 (215)
T ss_pred CCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecC
Confidence 763 000
Q ss_pred -eeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 102 -HKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 102 -~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
..+..+ ..|...++++++.++++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 137 ~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~-vam~na 191 (215)
T TIGR01487 137 FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK-VAVANA 191 (215)
T ss_pred ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe-EEcCCc
Confidence 001111 3467889999999999999999999999999999999965 444444
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.7e-13 Score=94.66 Aligned_cols=142 Identities=14% Similarity=0.071 Sum_probs=100.9
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceee----c--cCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHH
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVL----D--AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 90 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~ 90 (171)
+.+|+|||+||+........ ...+... . ...-.+...||+.++|+.|.+. +.++|.|+++. ..++.+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~i 74 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPK-----VDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPV 74 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCC-----CCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHH
Confidence 47999999999875332210 0001100 0 1112456789999999999988 99999999988 888999
Q ss_pred HHhcCccc-cccee---eEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCcHH---HHH
Q psy4436 91 VDLFNWNQ-HFDHK---EIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS---VLH 161 (171)
Q Consensus 91 l~~~~l~~-~fd~~---~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~---~~~ 161 (171)
++.++... +|+.. +.+. +++ +.+.++.++.+++++++|||++.++..+.++|+.+..+.....-. .+.
T Consensus 75 l~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~ 151 (162)
T TIGR02251 75 LDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLI 151 (162)
T ss_pred HHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHH
Confidence 99999775 77655 1111 333 677788899999999999999999999999999877776544333 334
Q ss_pred HHHHHhh
Q psy4436 162 KGLKQWA 168 (171)
Q Consensus 162 ~~~~~~~ 168 (171)
..|+..+
T Consensus 152 ~~L~~l~ 158 (162)
T TIGR02251 152 PFLEGLR 158 (162)
T ss_pred HHHHHHh
Confidence 4555544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-12 Score=100.00 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=48.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
|+|+++||+||||++. ...+.+...++|++|+++|++++++|+++. ..+...++.+
T Consensus 1 m~kli~~DlDGTLl~~-----------------------~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~-~~~~~~~~~l 56 (272)
T PRK15126 1 MARLAAFDMDGTLLMP-----------------------DHHLGEKTLSTLARLRERDITLTFATGRHV-LEMQHILGAL 56 (272)
T ss_pred CccEEEEeCCCcCcCC-----------------------CCcCCHHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHc
Confidence 3789999999999762 113467788999999999999999999988 5666688887
Q ss_pred Cccc
Q psy4436 95 NWNQ 98 (171)
Q Consensus 95 ~l~~ 98 (171)
++..
T Consensus 57 ~~~~ 60 (272)
T PRK15126 57 SLDA 60 (272)
T ss_pred CCCC
Confidence 7653
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.7e-13 Score=100.29 Aligned_cols=121 Identities=21% Similarity=0.201 Sum_probs=85.2
Q ss_pred CCcEEEEeCCCCCCCceecc----ccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYI----DVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRA 87 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~ 87 (171)
.|.+||||+|+|+++...+. .-+.+|.+.. +..... ....++||+.++|+.|+++|++++++||+... ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~--~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQA--AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHc--CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 47899999999999765441 1123443333 222222 35568999999999999999999999998631 334
Q ss_pred HHHHHhcCccccc-ceeeE--ecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccccc
Q psy4436 88 HQLVDLFNWNQHF-DHKEI--FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDV 141 (171)
Q Consensus 88 ~~~l~~~~l~~~f-d~~~~--~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a 141 (171)
...++++|+..++ +.+.. ...+|+...+.+.+.+++ +++|||+..|+..+
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 4688889998644 34321 125677778888776666 99999999998553
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG3040|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-12 Score=91.96 Aligned_cols=116 Identities=19% Similarity=0.213 Sum_probs=92.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~ 92 (171)
.++.+.+|+-|||.. +....|++.+++++|+.++.++=.+||.... ......|.
T Consensus 6 ~v~gvLlDlSGtLh~------------------------e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~ 61 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHI------------------------EDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQ 61 (262)
T ss_pred ccceEEEeccceEec------------------------ccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHH
Confidence 478899999999944 2236899999999999999999999997552 23334566
Q ss_pred hcCccc--------------------------------------------------------------------------
Q psy4436 93 LFNWNQ-------------------------------------------------------------------------- 98 (171)
Q Consensus 93 ~~~l~~-------------------------------------------------------------------------- 98 (171)
++|+.-
T Consensus 62 rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~ 141 (262)
T KOG3040|consen 62 RLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPL 141 (262)
T ss_pred HhCCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCe
Confidence 666654
Q ss_pred --------ccc--------------------ee--eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCce
Q psy4436 99 --------HFD--------------------HK--EIFPGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVT 147 (171)
Q Consensus 99 --------~fd--------------------~~--~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~ 147 (171)
||. .. ....||.+.+|+.+++.+|++|++++||||..+ |+..|+++||.
T Consensus 142 LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMr 221 (262)
T KOG3040|consen 142 LIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMR 221 (262)
T ss_pred EEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcce
Confidence 220 00 223489999999999999999999999999999 89999999999
Q ss_pred EEEeCCC
Q psy4436 148 CIHVKDG 154 (171)
Q Consensus 148 ~i~v~~g 154 (171)
.++|+.|
T Consensus 222 gilVkTG 228 (262)
T KOG3040|consen 222 GILVKTG 228 (262)
T ss_pred eEEeecc
Confidence 9999764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-12 Score=97.98 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=38.2
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
|...++++++.+|+++++++.|||+.+|+.+.+.+|. ++++.++.
T Consensus 191 Kg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~-~vAm~NA~ 235 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGK-GCIMGNAH 235 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCC-CeeecCCc
Confidence 5677888889999999999999999999999999996 55665543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-12 Score=97.57 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=51.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||++.. ....+...++|++++++|++++++|+++. ..+...++.+
T Consensus 2 ~~kli~~DlDGTLl~~~-----------------------~~i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l 57 (264)
T COG0561 2 MIKLLAFDLDGTLLDSN-----------------------KTISPETKEALARLREKGVKVVLATGRPL-PDVLSILEEL 57 (264)
T ss_pred CeeEEEEcCCCCccCCC-----------------------CccCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHc
Confidence 47899999999997622 22578899999999999999999999988 7788899998
Q ss_pred Cccc
Q psy4436 95 NWNQ 98 (171)
Q Consensus 95 ~l~~ 98 (171)
++..
T Consensus 58 ~~~~ 61 (264)
T COG0561 58 GLDG 61 (264)
T ss_pred CCCc
Confidence 8874
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.4e-12 Score=94.91 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=83.6
Q ss_pred EEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc
Q psy4436 19 AVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ 98 (171)
Q Consensus 19 vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~ 98 (171)
|+||+||||++... .+.+...++|++|++.|++++++|+++. ......++.+++..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~-~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSV-QFARALAKLIGTPD 56 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCch-HHHHHHHHHhCCCC
Confidence 58999999986321 2456778899999999999999999877 55565666666432
Q ss_pred ----------------------------------------------------------------------cc--------
Q psy4436 99 ----------------------------------------------------------------------HF-------- 100 (171)
Q Consensus 99 ----------------------------------------------------------------------~f-------- 100 (171)
.+
T Consensus 57 ~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (225)
T TIGR01482 57 PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVD 136 (225)
T ss_pred eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEec
Confidence 00
Q ss_pred --ceeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 101 --DHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 101 --d~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
...+..+ .+|...+++++++++++++++++|||+.+|+.+++.+|.. +.+.++
T Consensus 137 ~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 193 (225)
T TIGR01482 137 SGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANA 193 (225)
T ss_pred CCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCCh
Confidence 0011222 3567889999999999999999999999999999999974 556554
|
catalyze the same reaction as SPP. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.3e-12 Score=95.72 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=46.1
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|+||+||||++.. ..+.+...++|++|+++|++++++|+++. ..+...++.++
T Consensus 3 ~kli~~DlDGTLl~~~-----------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~-~~~~~~~~~l~ 58 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD-----------------------HTISPAVKQAIAAARAKGVNVVLTTGRPY-AGVHRYLKELH 58 (270)
T ss_pred eEEEEEecCCcCcCCC-----------------------CccCHHHHHHHHHHHHCCCEEEEecCCCh-HHHHHHHHHhC
Confidence 7899999999997621 13456788999999999999999999988 55666777777
Q ss_pred c
Q psy4436 96 W 96 (171)
Q Consensus 96 l 96 (171)
+
T Consensus 59 ~ 59 (270)
T PRK10513 59 M 59 (270)
T ss_pred C
Confidence 5
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-12 Score=93.55 Aligned_cols=89 Identities=13% Similarity=0.112 Sum_probs=77.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--ccceeeEecCCcHHHHHHHHHHhCCCCCcEEEE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 131 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~v 131 (171)
..++.|++.++|+.|++.|++++++|+.+. ..+....+.+|+.. +|.... ++|.+.+|..+++++++++++++||
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGIFDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTSCSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccc-cccccccccccccccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 457899999999999999999999998877 88888999999965 332222 5787788999999999999999999
Q ss_pred cCCcccccccccCC
Q psy4436 132 DDEERNSHDVSPLG 145 (171)
Q Consensus 132 gD~~~di~~a~~~G 145 (171)
||+.+|+.+++++|
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999887
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=93.70 Aligned_cols=117 Identities=16% Similarity=0.112 Sum_probs=87.6
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
+|+.||||||++++.. .....|.+.+++++++++|++++++|+++. ...+.+++.+++.
T Consensus 3 li~tDlDGTLl~~~~~--------------------~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~-~~~~~~~~~~~~~ 61 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDG--------------------DNQALLRLNALLEDHRGEDSLLVYSTGRSP-HSYKELQKQKPLL 61 (249)
T ss_pred EEEEcCCCcCcCCCCC--------------------ChHHHHHHHHHHHHhhccCceEEEEcCCCH-HHHHHHHhcCCCC
Confidence 5677999999874422 123357788899999999999999999877 5566566655543
Q ss_pred c-------------------------------------------------------------c-----------------
Q psy4436 98 Q-------------------------------------------------------------H----------------- 99 (171)
Q Consensus 98 ~-------------------------------------------------------------~----------------- 99 (171)
. +
T Consensus 62 ~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 141 (249)
T TIGR01485 62 TPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEM 141 (249)
T ss_pred CCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHH
Confidence 2 0
Q ss_pred -------c-------ceeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 100 -------F-------DHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 100 -------f-------d~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+ ..++..+ .+|...++++++.++++++++++|||+.+|+.+++.+|..++++.++.
T Consensus 142 l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 142 LKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 0 0002222 567888999999999999999999999999999999888888887654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=94.59 Aligned_cols=60 Identities=25% Similarity=0.258 Sum_probs=47.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|++|+||||++.. ....+.+.++|+.|+++|++++++|+++. ..+...++.+
T Consensus 3 ~~kli~~DlDGTLl~~~-----------------------~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~-~~~~~~~~~l 58 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHH-----------------------TYSYEPAKPALKALKEKGIPVIPCTSKTA-AEVEVLRKEL 58 (273)
T ss_pred cceEEEEcCcccCcCCC-----------------------CcCcHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHc
Confidence 47899999999997621 12356788999999999999999999877 5566677777
Q ss_pred Cccc
Q psy4436 95 NWNQ 98 (171)
Q Consensus 95 ~l~~ 98 (171)
++..
T Consensus 59 ~l~~ 62 (273)
T PRK00192 59 GLED 62 (273)
T ss_pred CCCC
Confidence 7654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=91.61 Aligned_cols=112 Identities=22% Similarity=0.237 Sum_probs=88.9
Q ss_pred EEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc
Q psy4436 19 AVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ 98 (171)
Q Consensus 19 vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~ 98 (171)
|++|+||||++. ...+.|...++|++|+++|++++++|+++. ..+...+..+++..
T Consensus 1 i~~DlDGTLl~~-----------------------~~~i~~~~~~al~~l~~~g~~~~i~TGR~~-~~~~~~~~~~~~~~ 56 (254)
T PF08282_consen 1 IFSDLDGTLLNS-----------------------DGKISPETIEALKELQEKGIKLVIATGRSY-SSIKRLLKELGIDD 56 (254)
T ss_dssp EEEECCTTTCST-----------------------TSSSCHHHHHHHHHHHHTTCEEEEECSSTH-HHHHHHHHHTTHCS
T ss_pred cEEEECCceecC-----------------------CCeeCHHHHHHHHhhcccceEEEEEccCcc-cccccccccccchh
Confidence 689999999762 223568899999999999999999999988 77788999888773
Q ss_pred --------------------------------------------------------------------------------
Q psy4436 99 -------------------------------------------------------------------------------- 98 (171)
Q Consensus 99 -------------------------------------------------------------------------------- 98 (171)
T Consensus 57 ~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (254)
T PF08282_consen 57 YFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDL 136 (254)
T ss_dssp EEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHH
T ss_pred hhcccccceeeecccccchhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccc
Confidence
Q ss_pred --------------------------cc----ce-------eeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 99 --------------------------HF----DH-------KEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 99 --------------------------~f----d~-------~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
.| .. .+..+ -.|....+++++.++++++++++|||+.+|+.
T Consensus 137 ~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~ 216 (254)
T PF08282_consen 137 EDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIE 216 (254)
T ss_dssp HCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHH
T ss_pred ccccceeeeccccchhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHh
Confidence 11 11 12223 45788899999999999999999999999999
Q ss_pred ccccCCceEEEeCCCC
Q psy4436 140 DVSPLGVTCIHVKDGM 155 (171)
Q Consensus 140 ~a~~~G~~~i~v~~g~ 155 (171)
+.+.+|. ++.+.++.
T Consensus 217 Ml~~~~~-~~am~na~ 231 (254)
T PF08282_consen 217 MLELAGY-SVAMGNAT 231 (254)
T ss_dssp HHHHSSE-EEEETTS-
T ss_pred HHhhcCe-EEEEcCCC
Confidence 9999985 46665544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.9e-12 Score=95.02 Aligned_cols=102 Identities=21% Similarity=0.189 Sum_probs=76.7
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeee-CCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKY-YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
..+++|+||+||||++.+- ...+ .|++.++|++|+++|++++|+|+++. ..+...++
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~R-e~v~~~L~ 181 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDR-DHVVESMR 181 (301)
T ss_pred ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHH
Confidence 4589999999999987322 2222 49999999999999999999999988 66667999
Q ss_pred hcCcccccceeeEe-----cC-----------------------------Cc-HHHHHHHHHHhCCCCCc-EEEEcCCcc
Q psy4436 93 LFNWNQHFDHKEIF-----PG-----------------------------QK-TTHFANLKKATGIEYKD-MVFFDDEER 136 (171)
Q Consensus 93 ~~~l~~~fd~~~~~-----~~-----------------------------~k-~~~~~~~~~~~~~~~~~-~l~vgD~~~ 136 (171)
.+|+..+|+.+... .+ || |....+.+++.|++.-. +..|||-..
T Consensus 182 ~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~ 261 (301)
T TIGR01684 182 KVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLAD 261 (301)
T ss_pred HcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcc
Confidence 99999988655110 01 12 35578888889988554 566887766
Q ss_pred c
Q psy4436 137 N 137 (171)
Q Consensus 137 d 137 (171)
|
T Consensus 262 N 262 (301)
T TIGR01684 262 N 262 (301)
T ss_pred c
Confidence 3
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-11 Score=92.01 Aligned_cols=43 Identities=21% Similarity=0.374 Sum_probs=37.1
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
|...++.+++.++++++++++|||+.+|+.+++.+|+. +.+.+
T Consensus 189 K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~-~a~~n 231 (256)
T TIGR00099 189 KGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYG-VAMGN 231 (256)
T ss_pred hHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCce-eEecC
Confidence 56778999999999999999999999999999999975 44433
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.1e-12 Score=102.37 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=72.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-------ecCCcHHHHHHHHHHhCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-------FPGQKTTHFANLKKATGIEY 125 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-------~~~~k~~~~~~~~~~~~~~~ 125 (171)
...++.|++.+.+++++++|++++++|++++ ..++..++++|+ |+.+.. .+++|++. +.+.++ .
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~-~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~---l~~~l~--~ 139 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDE-RLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAA---LVEAFG--E 139 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCC---CCEEEeCCCccccCCchHHHH---HHHHhC--c
Confidence 3456789999999999999999999999988 788888999987 555411 12334433 334454 3
Q ss_pred CcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++.|+||+..|+.+++.+| +.+.|+.+..
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~~ 169 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAAR-RAIVVGASPG 169 (479)
T ss_pred cCeeEecCCHHHHHHHHhCC-CeEEECCCHH
Confidence 66899999999999999999 7788865543
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.6e-12 Score=89.03 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=79.2
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh---cCccccccee-e--EecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL---FNWNQHFDHK-E--IFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~---~~l~~~fd~~-~--~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
-.-.+||++.+.|+++++.|++++|.|+++. ...+.+..+ -++..+|+.. + +.+|....-|.++++..|++|.
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV-~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ 178 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSV-KAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPA 178 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCc-hhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCch
Confidence 3457899999999999999999999999877 433433332 3455566544 2 3345556779999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+++|+.|.+..+.+|+.+|+++.++.
T Consensus 179 eilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 179 EILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred heEEecCCHHHHHHHHhcchheeeee
Confidence 99999999999999999999988883
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=87.70 Aligned_cols=134 Identities=18% Similarity=0.201 Sum_probs=92.4
Q ss_pred cCCcEEEEeCCCCCCCceeccccC--------------------Cccee-----------cCcee-eccCCCeeeeCCCH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVI--------------------PPFKK-----------IGDKV-LDAGGAIIKYYRDV 61 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~--------------------~~~~~-----------~~~~~-~~~~~~~~~~~~~v 61 (171)
...++|+||+|-|++..+....+. .+|+. ...++ ........++.||+
T Consensus 14 ~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~~lT~Gi 93 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKPTLTPGI 93 (227)
T ss_pred HhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCCccCCCH
Confidence 457899999999998765543221 12321 11111 12223467889999
Q ss_pred HHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--c------ccee---eEe----c----CCcHHHHHHHHHHhC
Q psy4436 62 PAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--H------FDHK---EIF----P----GQKTTHFANLKKATG 122 (171)
Q Consensus 62 ~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--~------fd~~---~~~----~----~~k~~~~~~~~~~~~ 122 (171)
+++.+.|+++|.+++++|++.. ..+......+|++. . |+.. .++ | .-|++.+..+.+ +
T Consensus 94 ~eLv~~L~~~~~~v~liSGGF~-~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk--~ 170 (227)
T KOG1615|consen 94 RELVSRLHARGTQVYLISGGFR-QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRK--N 170 (227)
T ss_pred HHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHh--C
Confidence 9999999999999999999977 77887888899886 1 1111 111 1 335666777665 8
Q ss_pred CCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 123 IEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 123 ~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
.+.+.+++|||+.+|+.+..- |..++..
T Consensus 171 ~~~~~~~mvGDGatDlea~~p-a~afi~~ 198 (227)
T KOG1615|consen 171 YNYKTIVMVGDGATDLEAMPP-ADAFIGF 198 (227)
T ss_pred CChheeEEecCCccccccCCc-hhhhhcc
Confidence 899999999999999888666 4444443
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=86.23 Aligned_cols=40 Identities=10% Similarity=-0.054 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
|+..++++++.+|++++++++|||+.+|+.+.+.+|....
T Consensus 180 Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 180 KGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred HHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 4566788888999999999999999999999999996543
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=76.00 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=60.1
Q ss_pred EEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHhcCc
Q psy4436 19 AVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNW 96 (171)
Q Consensus 19 vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~~~l 96 (171)
++||+|||||. ...++||+.++|+.|+++|++++++||++.. ......++.+|+
T Consensus 1 ~l~D~dGvl~~------------------------g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYN------------------------GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEE------------------------TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEe------------------------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999976 4467999999999999999999999998632 233446677887
Q ss_pred ccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCC
Q psy4436 97 NQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 97 ~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G 145 (171)
..--+.+ +. ........+++. .....++++|-. ......+++|
T Consensus 57 ~~~~~~i--~t--s~~~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 57 PVDEDEI--IT--SGMAAAEYLKEH-KGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp T--GGGE--EE--HHHHHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTT
T ss_pred CCCcCEE--EC--hHHHHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcC
Confidence 7322222 22 123344444443 335667777754 3333444444
|
... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=96.51 Aligned_cols=58 Identities=14% Similarity=0.053 Sum_probs=45.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||++. ...+.+...++|++|+++|++++++|+++. ..+...++.+
T Consensus 307 ~iKLIa~DLDGTLLn~-----------------------d~~Is~~t~eAI~kl~ekGi~~vIATGR~~-~~i~~~l~~L 362 (580)
T PLN02887 307 KFSYIFCDMDGTLLNS-----------------------KSQISETNAKALKEALSRGVKVVIATGKAR-PAVIDILKMV 362 (580)
T ss_pred CccEEEEeCCCCCCCC-----------------------CCccCHHHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHh
Confidence 5799999999999762 123466788999999999999999999987 5555566665
Q ss_pred Cc
Q psy4436 95 NW 96 (171)
Q Consensus 95 ~l 96 (171)
++
T Consensus 363 ~l 364 (580)
T PLN02887 363 DL 364 (580)
T ss_pred Cc
Confidence 43
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=92.89 Aligned_cols=128 Identities=23% Similarity=0.232 Sum_probs=93.9
Q ss_pred ccccCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHH
Q psy4436 11 SVKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 90 (171)
Q Consensus 11 ~~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~ 90 (171)
.+....|++|+|||+|||..-+...... .+.-.....-++|....+.+..|+++|+-++|+|-+.. .-++..
T Consensus 217 ~~g~~kK~LVLDLDNTLWGGVIGedGv~-------GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~-~da~ev 288 (574)
T COG3882 217 MSGKSKKALVLDLDNTLWGGVIGEDGVD-------GIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTE-KDAKEV 288 (574)
T ss_pred hhCcccceEEEecCCccccccccccccc-------ceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCch-hhHHHH
Confidence 4445679999999999998666543211 11111112335567788999999999999999998877 555556
Q ss_pred HHhcC-cc---cccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 91 VDLFN-WN---QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 91 l~~~~-l~---~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
..+.. +. ..|+...+.-.||.+.++++++++|+..+..+|+||++...+-.++.+-
T Consensus 289 F~khp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 289 FRKHPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred HhhCCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 55542 11 2344444555899999999999999999999999999999988888774
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6e-11 Score=90.59 Aligned_cols=102 Identities=22% Similarity=0.195 Sum_probs=77.6
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeee-CCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKY-YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
..+++|+||+||||+..+- ...+ .|++.++|++|+++|++++|+||++. ..+...++
T Consensus 126 ~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~R-e~v~~~Le 183 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNR-EHVVHSLK 183 (303)
T ss_pred eeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHH
Confidence 4689999999999976322 2222 49999999999999999999999977 66777999
Q ss_pred hcCcccccceeeEe----------------------------------cCCc-HHHHHHHHHHhCCCCC-cEEEEcCCcc
Q psy4436 93 LFNWNQHFDHKEIF----------------------------------PGQK-TTHFANLKKATGIEYK-DMVFFDDEER 136 (171)
Q Consensus 93 ~~~l~~~fd~~~~~----------------------------------~~~k-~~~~~~~~~~~~~~~~-~~l~vgD~~~ 136 (171)
.+++..+|+.+... .-|| |....+.+++.|++.- -+..|||-..
T Consensus 184 ~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~ 263 (303)
T PHA03398 184 ETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKS 263 (303)
T ss_pred HcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcc
Confidence 99999988644110 0122 4568889999999865 4667888776
Q ss_pred c
Q psy4436 137 N 137 (171)
Q Consensus 137 d 137 (171)
|
T Consensus 264 N 264 (303)
T PHA03398 264 N 264 (303)
T ss_pred c
Confidence 4
|
|
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.6e-11 Score=85.72 Aligned_cols=105 Identities=13% Similarity=0.203 Sum_probs=76.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCc-EEEEEcCCchhHHHHHHHHhcCcccccceeeEe-------------c---------CC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-------------P---------GQ 109 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~-~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~-------------~---------~~ 109 (171)
..++..||+.++++.+++.|. .++|+|..+. -+...+++++++.+.|+.+..- | .|
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNs-fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANS-FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCch-hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 467889999999999999985 9999998877 7888899999999988544110 1 11
Q ss_pred ----cHHHHHHHH---HHhCCCCCcEEEEcCCcccccccccCCceEEEe-CCCCcHH
Q psy4436 110 ----KTTHFANLK---KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV-KDGMSHS 158 (171)
Q Consensus 110 ----k~~~~~~~~---~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v-~~g~~~~ 158 (171)
|...+.++. -+-|+++++++||||+-+|+.+...+--.-+.+ +.|+...
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~ 216 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLW 216 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchH
Confidence 222233332 345889999999999999988887765544444 5566543
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-10 Score=89.56 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=40.6
Q ss_pred cCCcHHHHHHHHHHh--------CC-----CCCcEEEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 107 PGQKTTHFANLKKAT--------GI-----EYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~--------~~-----~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
.||.+.+|+.+++.+ ++ ++++++||||+. .|+..|+++|+.+++|..|
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 477788888877776 33 457999999999 5999999999999999877
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=90.11 Aligned_cols=101 Identities=11% Similarity=0.121 Sum_probs=82.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc-C-------cccccceeeEe-cCC---------------
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-N-------WNQHFDHKEIF-PGQ--------------- 109 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~-~-------l~~~fd~~~~~-~~~--------------- 109 (171)
.+...|++.++|+.|+++|++++|+||++. ..+...++.+ + +..+|+.+... .||
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~-~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDY-DYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 356699999999999999999999999988 8888899996 6 78888866221 122
Q ss_pred -------------cH-----HHHHHHHHHhCCCCCcEEEEcCCcc-cccccc-cCCceEEEeCCCC
Q psy4436 110 -------------KT-----THFANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKDGM 155 (171)
Q Consensus 110 -------------k~-----~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~-~~G~~~i~v~~g~ 155 (171)
+. .....+.+.+++++++++||||+.. |+..++ .+||.++++....
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 00 2357778889999999999999999 999998 8999999997644
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.5e-10 Score=86.72 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHhCC---CCCcEEEEcCCcccccccccCCceE
Q psy4436 110 KTTHFANLKKATGI---EYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 110 k~~~~~~~~~~~~~---~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
|....+.+++.+|+ ++++++.|||+.+|+.+.+.+|...
T Consensus 188 Kg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gv 229 (271)
T PRK03669 188 KDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAV 229 (271)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEE
Confidence 45667888888999 9999999999999999999999643
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=83.30 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=37.0
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceE
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
.+|+..+++++++++++++++++|||+.+|+.+++.+|+..
T Consensus 162 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 162 VDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 45778899999999999999999999999999999998754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.1e-11 Score=72.97 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=49.1
Q ss_pred ecCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCcHH
Q psy4436 106 FPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 106 ~~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
+.||.+.+|..++++++++++++++|||+ ..|+.+|+++|+.+++|.+|....
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~ 55 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSP 55 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCC
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCH
Confidence 56999999999999999999999999999 789999999999999999887543
|
... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-09 Score=81.45 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=83.4
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhh-CCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQ-NNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
.+|+||+||||++..... ....+.+.+.+.|+.|++ .|++++|+|+++. ..+..+++.++
T Consensus 15 ~li~~D~DGTLl~~~~~p------------------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~-~~~~~~~~~~~ 75 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHP------------------DQVVVPDNILQGLQLLATANDGALALISGRSM-VELDALAKPYR 75 (266)
T ss_pred EEEEEecCCCCCCCCCCc------------------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCH-HHHHHhcCccc
Confidence 588899999998732211 123456889999999998 7999999999987 55555665444
Q ss_pred ccc--------------------------------------------------------------------------ccc
Q psy4436 96 WNQ--------------------------------------------------------------------------HFD 101 (171)
Q Consensus 96 l~~--------------------------------------------------------------------------~fd 101 (171)
+.- .|.
T Consensus 76 ~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~ 155 (266)
T PRK10187 76 FPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWP 155 (266)
T ss_pred ceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCC
Confidence 221 111
Q ss_pred e---------eeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC---CceEEEeCC
Q psy4436 102 H---------KEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKD 153 (171)
Q Consensus 102 ~---------~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~---G~~~i~v~~ 153 (171)
. ++..| -.|...++++++.++++.++++||||..+|+.+.+.+ |..++.+..
T Consensus 156 ~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~ 221 (266)
T PRK10187 156 QLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT 221 (266)
T ss_pred ceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC
Confidence 0 01122 2456778899999999999999999999998887766 446667754
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-11 Score=90.75 Aligned_cols=93 Identities=8% Similarity=-0.025 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-------eEecCCcHHHHHHHHHHhCCC-CCcEE
Q psy4436 58 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-------EIFPGQKTTHFANLKKATGIE-YKDMV 129 (171)
Q Consensus 58 ~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-------~~~~~~k~~~~~~~~~~~~~~-~~~~l 129 (171)
++++.++++.|+++|+++ ++||.+. ......+..++...+|..+ ....||++.+|+.++++++.. +++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~-~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDR-GINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCE-eccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 689999999999999997 8899866 4444455566666555432 124599999999999999875 67899
Q ss_pred EEcCC-cccccccccCCceEEEeC
Q psy4436 130 FFDDE-ERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 130 ~vgD~-~~di~~a~~~G~~~i~v~ 152 (171)
||||+ ..|+.+|+++|+.+++|.
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEe
Confidence 99999 589999999999999884
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.2e-10 Score=84.01 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=39.3
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.+|+..++.++++++++++++++|||+.+|+.+.+.+|. ++.+.++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~-~iav~na 203 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTL-GVVVGNH 203 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCc-EEEEcCC
Confidence 467888999999999999999999999999999999884 4456543
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.3e-10 Score=83.21 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=66.5
Q ss_pred eeeCCCHHHHH-HHHhhCCcEEEEEcCCchhHHHHHHHHhcCc---cccccee-eE-e----cCC---cHHHHHHHHHHh
Q psy4436 55 IKYYRDVPAIL-KYLKQNNCLVAAASRTTEMLRAHQLVDLFNW---NQHFDHK-EI-F----PGQ---KTTHFANLKKAT 121 (171)
Q Consensus 55 ~~~~~~v~~~l-~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l---~~~fd~~-~~-~----~~~---k~~~~~~~~~~~ 121 (171)
..++||+.+.| +.|+++|++++|+||++. ..++.+++.+++ ....... +. + ..+ ..+=..++.+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~-~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ-PLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence 46699999999 578889999999999988 778888888885 2222111 11 0 011 112234444445
Q ss_pred CCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 122 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 122 ~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+.+...+.+-|||.+|+.....+|-. +.|+
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vn 202 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVT 202 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC-EEEC
Confidence 66778889999999999999998844 4443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.5e-09 Score=80.85 Aligned_cols=91 Identities=9% Similarity=0.010 Sum_probs=72.5
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-------------eEecCC------cH-H
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-------------EIFPGQ------KT-T 112 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-------------~~~~~~------k~-~ 112 (171)
....+.||+.++++.|+++|++++|+|++.. ..+...++.+++...+..+ .+++.| |. .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 3688999999999999999999999999987 8888899999885433222 122223 33 4
Q ss_pred HHHHHHHHhC--CCCCcEEEEcCCcccccccccC
Q psy4436 113 HFANLKKATG--IEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 113 ~~~~~~~~~~--~~~~~~l~vgD~~~di~~a~~~ 144 (171)
.++...+.++ .+++++++|||+.+|+.+|..+
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 4556778888 8999999999999999998876
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-09 Score=76.25 Aligned_cols=124 Identities=15% Similarity=-0.004 Sum_probs=79.6
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcc--------eecC----ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPF--------KKIG----DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 82 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~ 82 (171)
.-..+|+|||.||+++.......... .+.. ............++||+.++|+.|++. +.++|+|++.
T Consensus 5 ~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~ 83 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGT 83 (156)
T ss_pred CceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCc
Confidence 34679999999999865543221100 0000 000112233567899999999999955 9999999998
Q ss_pred hhHHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHH-HHhCCCCCcEEEEcCCcccccc
Q psy4436 83 EMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLK-KATGIEYKDMVFFDDEERNSHD 140 (171)
Q Consensus 83 ~~~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~-~~~~~~~~~~l~vgD~~~di~~ 140 (171)
+ ..+...++.++... +|.........-...+.+-+ .-++.+.+.+++|||++.-...
T Consensus 84 ~-~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~vvivDd~~~~~~~ 142 (156)
T TIGR02250 84 R-AYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMVVIIDDREDVWPW 142 (156)
T ss_pred H-HHHHHHHHHhCcCCCeeccEEEEeccCCCCccccHHHHcCCCcccEEEEeCCHHHhhc
Confidence 8 88999999999884 78332111110001123334 3457788999999999964333
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=81.65 Aligned_cols=44 Identities=14% Similarity=0.046 Sum_probs=35.2
Q ss_pred cHHHHHHHHHHhCCC--CCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 110 KTTHFANLKKATGIE--YKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 110 k~~~~~~~~~~~~~~--~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
|...++++++.++++ .+++++|||+.+|+.+.+.+|.. +++.++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~-vam~Na 222 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLA-VVVPGP 222 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEE-EEeCCC
Confidence 445577778888898 99999999999999999999954 444443
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.6e-10 Score=93.17 Aligned_cols=86 Identities=9% Similarity=0.056 Sum_probs=71.6
Q ss_pred eeeeCCCHHHHHHHHhhCC-cEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 54 IIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
..+++||+.++|+.|+++| ++++++||.+. ..+...++++|+..+|... .|.+|+..+++ ++..+++++|||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~~~--~p~~K~~~v~~----l~~~~~~v~~vG 454 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHAEL--LPEDKLAIVKE----LQEEGGVVAMVG 454 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeeccC--CHHHHHHHHHH----HHHcCCEEEEEE
Confidence 4568999999999999999 99999999988 7888899999998888654 34445544444 444677999999
Q ss_pred CCcccccccccCCc
Q psy4436 133 DEERNSHDVSPLGV 146 (171)
Q Consensus 133 D~~~di~~a~~~G~ 146 (171)
|+.+|+.+++++|+
T Consensus 455 Dg~nD~~al~~A~v 468 (556)
T TIGR01525 455 DGINDAPALAAADV 468 (556)
T ss_pred CChhHHHHHhhCCE
Confidence 99999999999994
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.6e-09 Score=77.77 Aligned_cols=54 Identities=15% Similarity=0.140 Sum_probs=41.9
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
.+|+|+|||||||++. ..++.|...++|++|+++|++++++|+++. ......+.
T Consensus 4 ~~klia~DlDGTLL~~-----------------------~~~is~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~l~ 57 (247)
T PTZ00174 4 KKTILLFDVDGTLTKP-----------------------RNPITQEMKDTLAKLKSKGFKIGVVGGSDY-PKIKEQLG 57 (247)
T ss_pred CCeEEEEECcCCCcCC-----------------------CCCCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHh
Confidence 4799999999999762 223456788999999999999999999977 44444444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-09 Score=75.01 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=73.5
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHH---HHHHHh-
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA---HQLVDL- 93 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~---~~~l~~- 93 (171)
+|+||+||||++.....++. ...+. -...|++.+++++|+++|++++++|+++. ... +.++..
T Consensus 1 iVisDIDGTL~~sd~~~~~~-----------~~~~~-~~~~~~~~~a~~~l~~~G~~ivy~TGRp~-~~~~~t~~~l~~~ 67 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVV-----------PIIGK-DWTHPGVAKLYRDIQNNGYKILYLTARPI-GQADRTRSYLSQI 67 (157)
T ss_pred CEEEecCCCCcccccccccc-----------ccccc-CcCCHHHHHHHHHHHHcCCeEEEEcCCcH-HHHHHHHHHHHHh
Confidence 48999999999765433221 11111 24579999999999999999999999976 333 356766
Q ss_pred ----cCccc-c-c--ceee--------EecCC---cHHHHHHHHHHhCCCCCcEE-EEcCCcccccccccCCce
Q psy4436 94 ----FNWNQ-H-F--DHKE--------IFPGQ---KTTHFANLKKATGIEYKDMV-FFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 94 ----~~l~~-~-f--d~~~--------~~~~~---k~~~~~~~~~~~~~~~~~~l-~vgD~~~di~~a~~~G~~ 147 (171)
.++.. + + .... ...++ |.+..+.+.+.+.-.-...+ -+||+..|+.+-+++|+.
T Consensus 68 ~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 68 KQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred hhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 33431 1 1 0000 11222 34555666554432222343 489999999999999984
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-09 Score=80.39 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=62.7
Q ss_pred eeeCCCHHHHHH-HHhhCCcEEEEEcCCchhHHHHHHHHhcCc---ccccce-eeE----e-cCC---cHHHHHHHHHHh
Q psy4436 55 IKYYRDVPAILK-YLKQNNCLVAAASRTTEMLRAHQLVDLFNW---NQHFDH-KEI----F-PGQ---KTTHFANLKKAT 121 (171)
Q Consensus 55 ~~~~~~v~~~l~-~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l---~~~fd~-~~~----~-~~~---k~~~~~~~~~~~ 121 (171)
..++|++.+.|+ .++++|++++|+||++. ..++.+.+..++ ...... .+. . ..+ ..+=...+.+.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~-~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~ 171 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQ-PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI 171 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcH-HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence 357999999996 78889999999999988 777777767544 222211 111 0 011 112233343444
Q ss_pred CCCCCcEEEEcCCcccccccccCCceE
Q psy4436 122 GIEYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 122 ~~~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
+.+.+.+.+-|||.+|+.....+|-..
T Consensus 172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 172 GSPLKLYSGYSDSKQDNPLLAFCEHRW 198 (210)
T ss_pred CCChhheEEecCCcccHHHHHhCCCcE
Confidence 656778899999999999999988543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.6e-09 Score=88.79 Aligned_cols=85 Identities=11% Similarity=0.127 Sum_probs=69.7
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 133 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD 133 (171)
..+++|++.++++.|+++|++++++|+.+. ..++..++.+|+. +|.. ..|.+|.+.++++. .++++++||||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~~--~~p~~K~~~v~~l~----~~~~~v~~VGD 474 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRAE--VLPDDKAALIKELQ----EKGRVVAMVGD 474 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEcc--CChHHHHHHHHHHH----HcCCEEEEEeC
Confidence 346799999999999999999999999988 8888899999996 4432 24455665555543 36789999999
Q ss_pred CcccccccccCCc
Q psy4436 134 EERNSHDVSPLGV 146 (171)
Q Consensus 134 ~~~di~~a~~~G~ 146 (171)
+.+|+.+++++|+
T Consensus 475 g~nD~~al~~A~v 487 (562)
T TIGR01511 475 GINDAPALAQADV 487 (562)
T ss_pred CCccHHHHhhCCE
Confidence 9999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.3e-08 Score=83.33 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHhCCCCCcEEEE--cCCcccccccccCCceEEE
Q psy4436 110 KTTHFANLKKATGIEYKDMVFF--DDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~v--gD~~~di~~a~~~G~~~i~ 150 (171)
|....+.+++.++++.++++.| ||+.+|+.+.+.+|...+.
T Consensus 614 KG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 614 KGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 5566788888899988998888 9999999999999975444
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-09 Score=89.20 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=71.3
Q ss_pred eeeCCCHHHHHHHHhhCCc-EEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcC
Q psy4436 55 IKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 133 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~-~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD 133 (171)
.+++|++.++|+.|+++|+ +++++||.+. ..+...++++|+..+|... .|.+|.. ++++++...++++||||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~~~--~p~~K~~----~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHAEL--LPEDKLE----IVKELREKYGPVAMVGD 433 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhhcc--CcHHHHH----HHHHHHhcCCEEEEEeC
Confidence 4578999999999999999 9999999988 8888899999999888654 3445544 44445556689999999
Q ss_pred CcccccccccCCc
Q psy4436 134 EERNSHDVSPLGV 146 (171)
Q Consensus 134 ~~~di~~a~~~G~ 146 (171)
+.+|+.+++++|+
T Consensus 434 g~nD~~al~~A~v 446 (536)
T TIGR01512 434 GINDAPALAAADV 446 (536)
T ss_pred CHHHHHHHHhCCE
Confidence 9999999999995
|
. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.4e-10 Score=82.58 Aligned_cols=134 Identities=14% Similarity=0.132 Sum_probs=81.0
Q ss_pred CCcEEEEeCCCCCCCceec----cccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVY----IDVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRA 87 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~ 87 (171)
.+.+||||+|+|+++...+ ......|.+.. +..... + .-++.|++.++++.++++|++|.++||++.. ...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~-~-~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVAS-G-KAPAIPGALELYNYARSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHC-T-GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhc-c-cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHH
Confidence 4679999999999854322 11111222222 112221 2 2388999999999999999999999997553 445
Q ss_pred HHHHHhcCccccccee-eEec--CC------cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC---CceEEEeCC
Q psy4436 88 HQLVDLFNWNQHFDHK-EIFP--GQ------KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKD 153 (171)
Q Consensus 88 ~~~l~~~~l~~~fd~~-~~~~--~~------k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~---G~~~i~v~~ 153 (171)
...|.+.|+..+-..+ .... .. |......+.++ | .+=+++|||...|+..++.. |..++.+++
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-G--y~Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKK-G--YRIIANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHT-T--EEEEEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred HHHHHHcCCCccchhccccccccccccccccchHHHHHHHHc-C--CcEEEEeCCCHHHhhcccccccccceEEEcCC
Confidence 5578888866432222 1111 11 34445555544 2 23488899999999985443 345565554
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-08 Score=75.83 Aligned_cols=44 Identities=11% Similarity=0.058 Sum_probs=38.5
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC-------CceEEEeC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHVK 152 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~-------G~~~i~v~ 152 (171)
.|...+++++++++.++++++||||+.+|+.+++.+ |..++.+.
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 356889999999999999999999999999999888 67777773
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.5e-09 Score=73.83 Aligned_cols=128 Identities=20% Similarity=0.192 Sum_probs=73.7
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCc
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW 96 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l 96 (171)
|++||||||||+...........+. .........+...||+.++|+.|.+. +.++|.|.+.. ..+...++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~----~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~-~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFK----IIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASE-EYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEE----EETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-H-HHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccc----eeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehh-hhhhHHHHhhhh
Confidence 6899999999987554321100000 00001122456799999999999666 99999999977 889999999987
Q ss_pred -ccccceeeE---ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 97 -NQHFDHKEI---FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 97 -~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
..+|+..-. +...+. .+.+-++.++-+++++++|+|++.-...-...++..-.+
T Consensus 75 ~~~~~~~~~~r~~~~~~~~-~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f 132 (159)
T PF03031_consen 75 NGKLFSRRLYRDDCTFDKG-SYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPF 132 (159)
T ss_dssp TTSSEEEEEEGGGSEEETT-EEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----
T ss_pred hcccccccccccccccccc-ccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccc
Confidence 456755411 110000 112455666778999999999998654444444433333
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.2e-09 Score=78.82 Aligned_cols=61 Identities=18% Similarity=0.213 Sum_probs=50.4
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|++||||||++++.+ .++.+.++|++|+++|++++++|++.. ..+..+.+.++
T Consensus 1 ~KLIftDLDGTLLd~~~~-----------------------~~~~a~~aL~~Lk~~GI~vVlaTGRt~-~ev~~l~~~Lg 56 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFN-----------------------SYGAARQALAALERRSIPLVLYSLRTR-AQLEHLCRQLR 56 (302)
T ss_pred CcEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHhC
Confidence 478999999999885443 246688999999999999999999988 56666889999
Q ss_pred ccccc
Q psy4436 96 WNQHF 100 (171)
Q Consensus 96 l~~~f 100 (171)
+..+|
T Consensus 57 l~~p~ 61 (302)
T PRK12702 57 LEHPF 61 (302)
T ss_pred CCCeE
Confidence 87644
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=68.20 Aligned_cols=51 Identities=22% Similarity=0.014 Sum_probs=38.8
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
+|+|+||+||||....-..+ ....+.+++.+.|++|+++|+.++++|+++.
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y-----------------~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDY-----------------ANVAPILAVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred CCEEEEeCCCCcccCCCCcc-----------------cccccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 37899999999975211000 0134678899999999999999999999866
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-08 Score=72.24 Aligned_cols=88 Identities=10% Similarity=0.093 Sum_probs=64.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE----------------------ecCCcH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----------------------FPGQKT 111 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~----------------------~~~~k~ 111 (171)
...+-|+.+++++..++++++++++|++.. -..+.+++.+.-..-.+.+++ +...|+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~-~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMD-PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCc-hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 467889999999999999999999999988 677778888763321111100 111223
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 112 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
+..+.+.-+++.++|.||+..|+.+|+....
T Consensus 150 ----~vI~~l~e~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 150 ----SVIHELSEPNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ----hhHHHhhcCCceEEEecCCcccccHhhhhhh
Confidence 2345566778889999999999999988664
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.3e-08 Score=78.08 Aligned_cols=47 Identities=19% Similarity=0.130 Sum_probs=41.9
Q ss_pred CcHHHHHHHHHHh---CCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~---~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...++++++++ +++++++++|||+.+|+.+.+.+|+.++.+.++.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 4778899999999 9999999999999999999999998888886654
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.6e-08 Score=71.98 Aligned_cols=136 Identities=10% Similarity=-0.026 Sum_probs=82.8
Q ss_pred CCcEEEEeCCCCCCCceecc----ccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYI----DVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRA 87 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~ 87 (171)
...++|||+|.|+++...+. ..+.+|.... +.... ...-++.|++.++++.|+++|++|+++||++.. ...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~--~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLG--KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHH--cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 35799999999998755431 1123333322 11111 124478999999999999999999999999762 225
Q ss_pred HHHHHhcCcccccceeeEec---C-CcHHHHHHHHH-Hh-CCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 88 HQLVDLFNWNQHFDHKEIFP---G-QKTTHFANLKK-AT-GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 88 ~~~l~~~~l~~~fd~~~~~~---~-~k~~~~~~~~~-~~-~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
...|.+.|+..+ +.....+ . +....|+.-.+ ++ .-...=+..|||...|+... ..|-.++-+++.
T Consensus 154 ~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPNP 224 (229)
T TIGR01675 154 LDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPNP 224 (229)
T ss_pred HHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCC-CccCceeeCCCC
Confidence 567888887754 3331111 1 11122332222 11 12344567799999999664 456677776653
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=71.86 Aligned_cols=48 Identities=15% Similarity=0.130 Sum_probs=37.9
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
-.|....+++++++++++++++++||+.+|+.+. ..+..++.|.+...
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQP 211 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-H
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCH
Confidence 3577889999999999999999999999999887 66778998877553
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.7e-07 Score=69.08 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=28.6
Q ss_pred CCCcEEEEcC----CcccccccccCCceEEEeCCCCc
Q psy4436 124 EYKDMVFFDD----EERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 124 ~~~~~l~vgD----~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++++++||| +.||+.+.+.-|+.++.|++.-.
T Consensus 199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 7889999999 79999999988999999976443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.2e-08 Score=72.82 Aligned_cols=58 Identities=21% Similarity=0.122 Sum_probs=46.4
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
+|+||+||||++.. ...+...++|++|+++|++++++|+++. ......++.+++.
T Consensus 1 li~~DlDGTLl~~~------------------------~~~~~~~~ai~~l~~~G~~~vi~TgR~~-~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPG------------------------YEPGPAREALEELKDLGFPIVFVSSKTR-AEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCC------------------------CCchHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCC
Confidence 48899999997611 1256789999999999999999999987 5566688889876
Q ss_pred ccc
Q psy4436 98 QHF 100 (171)
Q Consensus 98 ~~f 100 (171)
.++
T Consensus 56 ~~~ 58 (225)
T TIGR02461 56 PPF 58 (225)
T ss_pred CcE
Confidence 533
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.4e-07 Score=79.18 Aligned_cols=61 Identities=21% Similarity=0.196 Sum_probs=45.3
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhh-CCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQ-NNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
.++++||+||||++..... ....+.+.+.++|++|.+ .|+.++++|+++. .....++...
T Consensus 492 ~rLi~~D~DGTL~~~~~~~------------------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~-~~l~~~~~~~ 552 (726)
T PRK14501 492 RRLLLLDYDGTLVPFAPDP------------------ELAVPDKELRDLLRRLAADPNTDVAIISGRDR-DTLERWFGDL 552 (726)
T ss_pred ceEEEEecCccccCCCCCc------------------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH-HHHHHHhCCC
Confidence 4799999999998743211 122456789999999999 4999999999977 5566566544
Q ss_pred C
Q psy4436 95 N 95 (171)
Q Consensus 95 ~ 95 (171)
+
T Consensus 553 ~ 553 (726)
T PRK14501 553 P 553 (726)
T ss_pred C
Confidence 3
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-07 Score=82.07 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=73.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
+++|++.+.|+.|++.|++++++|+.+. ..++...+.+|+..+|... .|.+|. .++++++..+++++||||+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~~~--~p~~K~----~~i~~l~~~~~~v~~vGDg~ 722 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIAGV--LPDGKA----EAIKRLQSQGRQVAMVGDGI 722 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEeCC--CHHHHH----HHHHHHhhcCCEEEEEeCCH
Confidence 5689999999999999999999999987 7788899999998766543 233344 45556677788999999999
Q ss_pred ccccccccCCceEEEeCCC
Q psy4436 136 RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g 154 (171)
+|+.+++++|+ .+.+.++
T Consensus 723 nD~~al~~Agv-gia~g~g 740 (834)
T PRK10671 723 NDAPALAQADV-GIAMGGG 740 (834)
T ss_pred HHHHHHHhCCe-eEEecCC
Confidence 99999999998 4444443
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.58 E-value=7e-08 Score=70.29 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=54.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh------HHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHHHHhCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------LRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKATGIEY 125 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~------~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~~~~~ 125 (171)
..+++.||+.++|++|.+.|..+.++|.++.. .....++++. +.. .++.+ .+.+.|. .+..
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~h-f~~i~~~~~-~~~~~K~----------~v~~ 137 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERH-FPFIPYDNL-IFTGDKT----------LVGG 137 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHH-HTHHHHCCE-EEESSGG----------GC--
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHH-cCCCchheE-EEecCCC----------eEec
Confidence 57899999999999999999666666654332 2345577775 221 12222 2223332 1222
Q ss_pred CcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+ ++|+|++.++..+...|+.++++...++
T Consensus 138 D--vlIDD~~~n~~~~~~~g~~~iLfd~p~N 166 (191)
T PF06941_consen 138 D--VLIDDRPHNLEQFANAGIPVILFDQPYN 166 (191)
T ss_dssp S--EEEESSSHHHSS-SSESSEEEEE--GGG
T ss_pred c--EEecCChHHHHhccCCCceEEEEcCCCC
Confidence 2 8999999999999999999999965443
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.9e-07 Score=68.63 Aligned_cols=136 Identities=7% Similarity=0.021 Sum_probs=81.4
Q ss_pred CcEEEEeCCCCCCCceecc--c--cCCcceecC-c-eeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHH
Q psy4436 16 PKLAVFDLDHTLWPFHVYI--D--VIPPFKKIG-D-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRA 87 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~--~--~~~~~~~~~-~-~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~ 87 (171)
..++|||+|+|++++..+. + .+.+|.... + ... .....++.|++.++.+.|++.|++|.++||+... +..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv--~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFV--NKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHH--hcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 4799999999999654331 1 112332221 1 111 1225567899999999999999999999998652 335
Q ss_pred HHHHHhcCcccccceeeEe-----cCCcHHHHHHHHH-H-hCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 88 HQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKK-A-TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 88 ~~~l~~~~l~~~fd~~~~~-----~~~k~~~~~~~~~-~-~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
...|.+.|+..+ +...-. .+....-|+.-.+ + ..-...=+..|||...|+.....-+-.+.-+++.
T Consensus 179 ~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 179 EANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred HHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCc
Confidence 557778887643 322111 1111122332211 1 2233455788999999997655323577777664
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.2e-07 Score=68.48 Aligned_cols=100 Identities=18% Similarity=0.168 Sum_probs=70.8
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHhcCcccc---c----------------------ceee-
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNWNQH---F----------------------DHKE- 104 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~~~l~~~---f----------------------d~~~- 104 (171)
.....-+.+.++++.|+++|+++..+|..+.. .....-|+++|+.-. | +++-
T Consensus 78 ~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 78 KMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred ceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE
Confidence 44456778999999999999999999987531 333335555666520 0 0000
Q ss_pred EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccc----cCCceEEEeC
Q psy4436 105 IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS----PLGVTCIHVK 152 (171)
Q Consensus 105 ~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~----~~G~~~i~v~ 152 (171)
...-+|.+.+..++.++|..|+.++||+|+..++.... +.|+..+++.
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEE
Confidence 00145789999999999999999999999999876543 4777766664
|
The function is not known. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=98.53 E-value=7e-07 Score=62.64 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=74.9
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc--hhHHHHHHHHhc-
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT--EMLRAHQLVDLF- 94 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~--~~~~~~~~l~~~- 94 (171)
+||+|+||||+.+.+..++ ....+.. ...+|+.++.+.++++||++..+|.++ +....+.+|...
T Consensus 1 VVvsDIDGTiT~SD~~G~i-----------~~~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~ 68 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHI-----------LPILGKD-WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQ 68 (157)
T ss_pred CEEEeccCCcCccchhhhh-----------hhccCch-hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHH
Confidence 4889999999976543322 1112222 568999999999999999999999986 335667778777
Q ss_pred ----Ccccc---cc------ee--eEecCCcHHHH-----HHHHHHhCCCCCc-EEEEcCCcccccccccCCce
Q psy4436 95 ----NWNQH---FD------HK--EIFPGQKTTHF-----ANLKKATGIEYKD-MVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 95 ----~l~~~---fd------~~--~~~~~~k~~~~-----~~~~~~~~~~~~~-~l~vgD~~~di~~a~~~G~~ 147 (171)
+++.- +. .. +.. ..+|+.| +.+...+...... ..-+|++..|+.+-+++|+.
T Consensus 69 q~~~~lP~Gpv~~sP~~l~~al~rEvi-~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 69 QQGHNLPDGPVLLSPDSLFSALHREVI-SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred hCCccCCCCCEEECCcchhhhhhcccc-ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 55531 11 00 111 2234333 3333333312222 33399999999999999984
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-06 Score=75.50 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHH-hhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYL-KQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
+.++|++|+||||++.... ...+.|++.++|++| ++.|..++|+|+++. .....++..
T Consensus 595 ~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~-~~L~~~f~~ 653 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSR-KTLADWFSP 653 (854)
T ss_pred cCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH-HHHHHHhCC
Confidence 3578999999999863321 224567899999998 677999999999877 666666644
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.2e-07 Score=79.13 Aligned_cols=91 Identities=9% Similarity=0.043 Sum_probs=73.6
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee---------------------eEecCCcHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------------------EIFPGQKTTH 113 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~---------------------~~~~~~k~~~ 113 (171)
-++.|++.++++.|++.|+++.++|+.+. ..+....+.+|+...++.. ..+....|+.
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQ-ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 36799999999999999999999999977 8888899999998655322 2344455555
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 114 ~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
-..+.+.++...+.+.|+||+.+|+.+.+++++
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe
Confidence 566666666667899999999999999999995
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.6e-07 Score=64.59 Aligned_cols=83 Identities=14% Similarity=0.217 Sum_probs=64.0
Q ss_pred CCCHH----HHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-eEe-----------cC--C--cHHHHHHH
Q psy4436 58 YRDVP----AILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EIF-----------PG--Q--KTTHFANL 117 (171)
Q Consensus 58 ~~~v~----~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~~~-----------~~--~--k~~~~~~~ 117 (171)
+|++. ++|+.++++|++++|+|+++. ..++.+++.+++...+-.. ... .. . |...++.+
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~ 165 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKEL 165 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHH
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHH
Confidence 46666 999999999999999999988 8888899999988643111 111 11 1 77777777
Q ss_pred ---HHHhCCCCCcEEEEcCCcccccccc
Q psy4436 118 ---KKATGIEYKDMVFFDDEERNSHDVS 142 (171)
Q Consensus 118 ---~~~~~~~~~~~l~vgD~~~di~~a~ 142 (171)
... +.++..+++|||+.+|+.+++
T Consensus 166 ~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 166 YIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 444 888999999999999998764
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.3e-06 Score=62.71 Aligned_cols=59 Identities=27% Similarity=0.289 Sum_probs=45.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++++|+.|+||||+++ .+. ...+..++.+|++.|++|+.+|+....+ .....+.+
T Consensus 6 ~~~lIFtDlD~TLl~~-~ye-----------------------~~pA~pv~~el~d~G~~Vi~~SSKT~aE-~~~l~~~l 60 (274)
T COG3769 6 MPLLIFTDLDGTLLPH-SYE-----------------------WQPAAPVLLELKDAGVPVILCSSKTRAE-MLYLQKSL 60 (274)
T ss_pred cceEEEEcccCcccCC-CCC-----------------------CCccchHHHHHHHcCCeEEEeccchHHH-HHHHHHhc
Confidence 5677778999999883 321 2336789999999999999999998844 44477788
Q ss_pred Cccc
Q psy4436 95 NWNQ 98 (171)
Q Consensus 95 ~l~~ 98 (171)
++..
T Consensus 61 ~v~~ 64 (274)
T COG3769 61 GVQG 64 (274)
T ss_pred CCCC
Confidence 8773
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.4e-06 Score=64.69 Aligned_cols=121 Identities=19% Similarity=0.160 Sum_probs=82.1
Q ss_pred CCcEEEEeCCCCCCCceeccc----cCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhH---H
Q psy4436 15 FPKLAVFDLDHTLWPFHVYID----VIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML---R 86 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~---~ 86 (171)
..++||.|+|.|++|...+.. -..+|.+.. +...+. ....+.||+.++++..-++|.+|..+||+.+.. .
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a--~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQA--KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhh--cccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 356999999999998776632 234565555 333332 256789999999999999999999999986632 2
Q ss_pred HHHHHHhcCcccccceeeEe---cCCcHHHHHHHHHHhCCCCCcEEEEcCCccccccc
Q psy4436 87 AHQLVDLFNWNQHFDHKEIF---PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDV 141 (171)
Q Consensus 87 ~~~~l~~~~l~~~fd~~~~~---~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a 141 (171)
...-|.+.|++..-...-.+ .++|..-++.+.+ ..+=+++|||+..|....
T Consensus 156 T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 156 TIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred hHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccceeeEecCchhhhcch
Confidence 33466777777544322122 2455555555544 556789999999976543
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.7e-06 Score=56.69 Aligned_cols=94 Identities=13% Similarity=0.167 Sum_probs=76.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 133 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD 133 (171)
.-.+|+.+.+.|+.|++. +.++|+|+-.. .+..+.++..|++.. ..+....++.=.++++.++-+.+.+++|||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~-gsl~~lae~~gi~~~----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGn 101 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRK-GSLVQLAEFVGIPVE----RVFAGADPEMKAKIIRELKKRYEKVVMVGN 101 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcc-hHHHHHHHHcCCcee----eeecccCHHHHHHHHHHhcCCCcEEEEecC
Confidence 557899999999999999 99999999755 777778888886632 233345566677888888888899999999
Q ss_pred CcccccccccCCceEEEeCC
Q psy4436 134 EERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 134 ~~~di~~a~~~G~~~i~v~~ 153 (171)
+.+|+.+.+++.+..+-+.+
T Consensus 102 GaND~laLr~ADlGI~tiq~ 121 (152)
T COG4087 102 GANDILALREADLGICTIQQ 121 (152)
T ss_pred CcchHHHhhhcccceEEecc
Confidence 99999999998776666654
|
|
| >KOG2961|consensus | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.2e-06 Score=58.50 Aligned_cols=115 Identities=11% Similarity=0.043 Sum_probs=78.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC-C-cEEEEEcCCchh-------H
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN-N-CLVAAASRTTEM-------L 85 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g-~~i~i~S~~~~~-------~ 85 (171)
.+|++|||=|++++-.+ .....|....-+++++.. | ..++++||+--. .
T Consensus 42 ~ikavVlDKDNcit~P~----------------------~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s 99 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPY----------------------SLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDS 99 (190)
T ss_pred CceEEEEcCCCeeeCCc----------------------ccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchH
Confidence 47999999999996422 234467777778888864 3 678899985221 3
Q ss_pred HHHHHHHhcCcccccceeeEecCCcH----HHHHHHHHHhC-CCCCcEEEEcCCcc-cccccccCCceEEEeCCCCc
Q psy4436 86 RAHQLVDLFNWNQHFDHKEIFPGQKT----THFANLKKATG-IEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 86 ~~~~~l~~~~l~~~fd~~~~~~~~k~----~~~~~~~~~~~-~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~ 156 (171)
.++.+.++.|++ +--.++-|| +.+.+....-. .+++|++||||+.- |+..|...|.-+++..+|..
T Consensus 100 ~Ak~le~k~gIp-----VlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 100 KAKALEAKIGIP-----VLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred HHHHHHHhhCCc-----eEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 344455556665 212333333 44444432111 57999999999999 99999999999999988754
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-05 Score=64.64 Aligned_cols=54 Identities=19% Similarity=0.090 Sum_probs=39.2
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
+++||+||||.+.... .....+.+++.++|++|.+. .+++|+|+++. +.+..++
T Consensus 121 ~LfLDyDGTLaPIv~~------------------Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~-~~L~~~l 174 (384)
T PLN02580 121 ALFLDYDGTLSPIVDD------------------PDRALMSDAMRSAVKNVAKY-FPTAIISGRSR-DKVYELV 174 (384)
T ss_pred EEEEecCCccCCCCCC------------------cccccCCHHHHHHHHHHhhC-CCEEEEeCCCH-HHHHHHh
Confidence 6777999999873322 23445678999999999988 68999999876 4444444
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.1e-06 Score=64.32 Aligned_cols=103 Identities=21% Similarity=0.195 Sum_probs=77.8
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
..|.+||||||.||+..+-. ..-..|.+.+.|.+|++.|..+++=|.++. +-+...++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~--------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~-eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD--------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNR-EHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc--------------------cccCChHHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHH
Confidence 45789999999999753322 223468899999999999999999998888 667779999
Q ss_pred cCcccccceeeEe----------------------c------------CCc-HHHHHHHHHHhCCCCCc-EEEEcCCccc
Q psy4436 94 FNWNQHFDHKEIF----------------------P------------GQK-TTHFANLKKATGIEYKD-MVFFDDEERN 137 (171)
Q Consensus 94 ~~l~~~fd~~~~~----------------------~------------~~k-~~~~~~~~~~~~~~~~~-~l~vgD~~~d 137 (171)
+++..+|+.+... + -|| |....+.+++.|++.-. +..|||-..|
T Consensus 179 ~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~N 258 (297)
T PF05152_consen 179 LKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSN 258 (297)
T ss_pred hCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCccc
Confidence 9999999665110 0 122 45688899999998654 6668887764
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-05 Score=58.60 Aligned_cols=111 Identities=18% Similarity=0.126 Sum_probs=71.7
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
.|++|+|||+||+++.+... ....-..|++.++|+.+.+. +.|+|-|.+.. ..+...+..++
T Consensus 21 kklLVLDLDeTLvh~~~~~~----------------~~~~~kRP~l~eFL~~~~~~-feIvVwTAa~~-~ya~~~l~~l~ 82 (195)
T TIGR02245 21 KKLLVLDIDYTLFDHRSPAE----------------TGEELMRPYLHEFLTSAYED-YDIVIWSATSM-KWIEIKMTELG 82 (195)
T ss_pred CcEEEEeCCCceEcccccCC----------------CceEEeCCCHHHHHHHHHhC-CEEEEEecCCH-HHHHHHHHHhc
Confidence 47999999999997533211 11335689999999999985 99999999877 88888888876
Q ss_pred cccc--c------cee-----eEec-C---CcHHHHHHHHHHhC--CCCCcEEEEcCCcccccccccCCc
Q psy4436 96 WNQH--F------DHK-----EIFP-G---QKTTHFANLKKATG--IEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 96 l~~~--f------d~~-----~~~~-~---~k~~~~~~~~~~~~--~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
+... + +.. .... + -|. +..+.++++ .+.+++++|||++.....==..|+
T Consensus 83 ~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 83 VLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred ccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence 5321 1 100 0000 1 111 223333444 377899999999996443333354
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.9e-06 Score=72.80 Aligned_cols=82 Identities=10% Similarity=0.110 Sum_probs=66.1
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.+.++.|++.|++++++|+.+. ..++.+.+.+|+..++. ..|..|+..++.+ + .+..++||||+.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~~v~~l----~-~~~~v~mvGDgi 638 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVKAVTEL----N-QHAPLAMVGDGI 638 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHHHHHHH----h-cCCCEEEEECCH
Confidence 5789999999999999999999999977 88888999999974432 2344455545443 3 236899999999
Q ss_pred ccccccccCCc
Q psy4436 136 RNSHDVSPLGV 146 (171)
Q Consensus 136 ~di~~a~~~G~ 146 (171)
+|..+.+++++
T Consensus 639 NDapAl~~A~v 649 (741)
T PRK11033 639 NDAPAMKAASI 649 (741)
T ss_pred HhHHHHHhCCe
Confidence 99999999984
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.3e-06 Score=66.58 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=69.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc---------CcccccceeeEe-cCC-------------
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---------NWNQHFDHKEIF-PGQ------------- 109 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~---------~l~~~fd~~~~~-~~~------------- 109 (171)
.-+...|.+..+|++|+++|.++.++||++. ..+...+..+ .+.++||.+... .||
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd 258 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVD 258 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEE
Confidence 4456678999999999999999999999987 7777777764 455678776221 122
Q ss_pred ---------c------------HHHHHHHHHHhCCCCCcEEEEcCCcc-ccccccc-CCceEEEeCCCCc
Q psy4436 110 ---------K------------TTHFANLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKDGMS 156 (171)
Q Consensus 110 ---------k------------~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~-~G~~~i~v~~g~~ 156 (171)
+ ......+.+.++....+++||||+.. |+..+++ .||.+++|-....
T Consensus 259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe 328 (448)
T PF05761_consen 259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE 328 (448)
T ss_dssp TTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred CCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence 0 13356777778999999999999999 8877777 5999999966543
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >KOG2630|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.2e-05 Score=59.18 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=75.2
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC----ccc----ccceeeEecCCcHHHHHHHHHHhCCCCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN----WNQ----HFDHKEIFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~----l~~----~fd~~~~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
-..++++..+++.++..|++++|.|..+. ...+ ++.... +.. |||. .+..|-....|.+|.+.++.++.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv-~AqK-llfg~s~~gdl~~y~~gyfDt-~iG~K~e~~sy~~I~~~Ig~s~~ 198 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSV-AAQK-LLFGYSDAGDLRKYISGYFDT-TIGLKVESQSYKKIGHLIGKSPR 198 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcH-HHHH-HHHcccCcchHHHHhhhhhhc-cccceehhHHHHHHHHHhCCChh
Confidence 36799999999999999999999999876 4444 444332 222 4444 23335556789999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+++|+-|......+|+.+|+.+..+.
T Consensus 199 eiLfLTd~~~Ea~aa~~aGl~a~l~~ 224 (254)
T KOG2630|consen 199 EILFLTDVPREAAAARKAGLQAGLVS 224 (254)
T ss_pred heEEeccChHHHHHHHhcccceeeee
Confidence 99999999999999999999888774
|
|
| >KOG2134|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.9e-05 Score=62.36 Aligned_cols=111 Identities=18% Similarity=0.152 Sum_probs=74.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh----------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---------- 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~---------- 84 (171)
.-|.+.||+||||++.-+...+ ......-..++|.+..=|++|...||+++|.||...+
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf-----------~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f 142 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVF-----------PKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEF 142 (422)
T ss_pred CcceEEEecCCceeecCCccee-----------eccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHH
Confidence 3578999999999986654321 1111223456889999999999999999999996543
Q ss_pred -HHHHHHHHhcCccccccee---eEecCCcHHHHHHHHHHhC----CCCCcEEEEcCCcc
Q psy4436 85 -LRAHQLVDLFNWNQHFDHK---EIFPGQKTTHFANLKKATG----IEYKDMVFFDDEER 136 (171)
Q Consensus 85 -~~~~~~l~~~~l~~~fd~~---~~~~~~k~~~~~~~~~~~~----~~~~~~l~vgD~~~ 136 (171)
..++.+.+.++++-.+-.. ..+.+|-..+++...+.++ +....+.|+||-..
T Consensus 143 ~~Ki~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaag 202 (422)
T KOG2134|consen 143 KKKIKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAG 202 (422)
T ss_pred HHHHHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhcc
Confidence 2334445556665332111 3356888888888876654 45556778888554
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.6e-05 Score=68.40 Aligned_cols=98 Identities=10% Similarity=0.091 Sum_probs=71.0
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--------cccee-----------------eEecCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--------HFDHK-----------------EIFPGQ 109 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--------~fd~~-----------------~~~~~~ 109 (171)
-++.|++.++++.|++.|+++.++|+... ..+....+.+|+.. .++.. ..+...
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 35789999999999999999999999866 78888999999863 12110 122222
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.|+.=.++.+.++-..+.+.|+||+.+|+.+.+++++ ++.+..|
T Consensus 615 ~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdV-Gia~g~g 658 (917)
T TIGR01116 615 EPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADI-GIAMGSG 658 (917)
T ss_pred CHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCe-eEECCCC
Confidence 2333344555555556789999999999999999998 4455444
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=68.14 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=68.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.++++.||++|+++.++|+-++ ..++...+.+|++.++-. ..|..|.+..+++. -....+.||||+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~-~~A~~iA~~lGId~v~Ae--llPedK~~~V~~l~----~~g~~VamVGDGI 609 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNR-RTAEAIAKELGIDEVRAE--LLPEDKAEIVRELQ----AEGRKVAMVGDGI 609 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcChHhhecc--CCcHHHHHHHHHHH----hcCCEEEEEeCCc
Confidence 4688999999999999999999999877 888989999999876544 36666776666655 2337899999999
Q ss_pred ccccccccCCc
Q psy4436 136 RNSHDVSPLGV 146 (171)
Q Consensus 136 ~di~~a~~~G~ 146 (171)
||-.+...+.+
T Consensus 610 NDAPALA~AdV 620 (713)
T COG2217 610 NDAPALAAADV 620 (713)
T ss_pred hhHHHHhhcCe
Confidence 99877776653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.9e-05 Score=65.09 Aligned_cols=92 Identities=11% Similarity=0.101 Sum_probs=71.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.+.++.|++.|+++.++|+.+. ..+....+.+|+..+|.. ..|..|...++.+.+ ..+.+.|+||+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~-~ta~~iA~~lGI~~v~a~--~~PedK~~~v~~lq~----~g~~VamvGDG~ 518 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNR-LTAAAIAAEAGVDDFIAE--ATPEDKIALIRQEQA----EGKLVAMTGDGT 518 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCEEEcC--CCHHHHHHHHHHHHH----cCCeEEEECCCc
Confidence 5788999999999999999999999877 888889999999865532 234445555655543 245799999999
Q ss_pred ccccccccCCceEEEeCCCC
Q psy4436 136 RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g~ 155 (171)
+|..+.+++++. +.+..|.
T Consensus 519 NDapAL~~AdvG-iAm~~gt 537 (675)
T TIGR01497 519 NDAPALAQADVG-VAMNSGT 537 (675)
T ss_pred chHHHHHhCCEe-EEeCCCC
Confidence 999999999864 3444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00018 Score=54.99 Aligned_cols=63 Identities=17% Similarity=0.081 Sum_probs=47.0
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
..++++||+||||.+.-.. .....+.+++.++|+.|..+ ...++|+|+.+. .....++.-
T Consensus 17 ~~~~~~lDyDGTl~~i~~~------------------p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~-~~l~~~~~v 77 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVPH------------------PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL-AELERLFGV 77 (266)
T ss_pred cceEEEEeccccccccccC------------------ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHhcCC
Confidence 3578999999999763332 23556788999999999988 446999999977 666666664
Q ss_pred cCc
Q psy4436 94 FNW 96 (171)
Q Consensus 94 ~~l 96 (171)
.++
T Consensus 78 ~~i 80 (266)
T COG1877 78 PGI 80 (266)
T ss_pred CCc
Confidence 443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.1e-05 Score=55.90 Aligned_cols=134 Identities=11% Similarity=0.035 Sum_probs=78.7
Q ss_pred CCcEEEEeCCCCCCCceecc-ccCCcceecC----------ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 15 FPKLAVFDLDHTLWPFHVYI-DVIPPFKKIG----------DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
.|=.|-||+|.|++=+.-.. +...-|.+.. +.+......-.-+.+-++++|..=++.|=+|+.+|++..
T Consensus 62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~ 141 (237)
T COG3700 62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP 141 (237)
T ss_pred CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 34579999999997322221 1111222221 222222333333444577788888899999999998754
Q ss_pred h---HHHHHHHHhcCcccccceeeEecCCcHHHHHH--HHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 84 M---LRAHQLVDLFNWNQHFDHKEIFPGQKTTHFAN--LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 84 ~---~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~--~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
- .....+.+.+++.......-...+||+.-|.+ +++.. .--++-||+.+|+.+|+.+|+..+.+-
T Consensus 142 gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~----~~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 142 GKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDK----NIRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhc----CceEEecCCchhhhHHHhcCccceeEE
Confidence 1 22333444455543222222233666644433 23333 346899999999999999999888773
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=4.5e-05 Score=60.66 Aligned_cols=55 Identities=16% Similarity=0.043 Sum_probs=40.1
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
-+|++|+||||.+...+ .....+.+++.++|++|. +|++++|+|+++. ..+..+.
T Consensus 112 ~llflD~DGTL~Piv~~------------------p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~-~~l~~~~ 166 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDD------------------PDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCI-DKVYNFV 166 (366)
T ss_pred eEEEEecCCcCcCCcCC------------------cccccCCHHHHHHHHHHh-cCCcEEEEeCCCH-HHHHHhh
Confidence 36777999999852221 112256788999999999 7799999999987 5555454
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=62.58 Aligned_cols=93 Identities=10% Similarity=0.085 Sum_probs=70.5
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.+.+++|++.|+++.++|+-+. ..+....+.+|+..+|... .|..|....+. ++-.-+-+.|+||+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGI~~v~A~~--~PedK~~iV~~----lQ~~G~~VaMtGDGv 513 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNE-LTAATIAKEAGVDRFVAEC--KPEDKINVIRE----EQAKGHIVAMTGDGT 513 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCceEEcCC--CHHHHHHHHHH----HHhCCCEEEEECCCh
Confidence 5789999999999999999999999876 8888899999998655332 34444444444 333346789999999
Q ss_pred ccccccccCCceEEEeCCCCc
Q psy4436 136 RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g~~ 156 (171)
||..+.+++.+ ++.+..|+.
T Consensus 514 NDAPALa~ADV-GIAMgsGTd 533 (673)
T PRK14010 514 NDAPALAEANV-GLAMNSGTM 533 (673)
T ss_pred hhHHHHHhCCE-EEEeCCCCH
Confidence 99999999875 344444543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=63.02 Aligned_cols=92 Identities=10% Similarity=0.086 Sum_probs=69.1
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.+.+++|++.|+++.++|+-+. ..++.+.+.+|+.++|.. ..|..|.+..+.. +-.-+-+.|+||+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGId~v~A~--~~PedK~~iV~~l----Q~~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFLAE--ATPEDKLALIRQE----QAEGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcEEEcc--CCHHHHHHHHHHH----HHcCCeEEEECCCc
Confidence 4689999999999999999999999866 888889999999765432 2344444444443 33346699999999
Q ss_pred ccccccccCCceEEEeCCCC
Q psy4436 136 RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g~ 155 (171)
||..+.+++.+- +.+..|+
T Consensus 518 NDAPALa~ADVG-IAMgsGT 536 (679)
T PRK01122 518 NDAPALAQADVG-VAMNSGT 536 (679)
T ss_pred chHHHHHhCCEe-EEeCCCC
Confidence 999999888753 3444444
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=97.70 E-value=6.6e-05 Score=56.39 Aligned_cols=52 Identities=21% Similarity=0.137 Sum_probs=30.2
Q ss_pred EEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHH
Q psy4436 20 VFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQL 90 (171)
Q Consensus 20 vfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~ 90 (171)
+||+||||.+..... ....+.+++.++|++|.+. +..++|+|+.+. +..+.+
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~-~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSL-DDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-H-HHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCH-HHhHHh
Confidence 589999998744432 2456788999999999987 346999999977 444434
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.6e-05 Score=59.15 Aligned_cols=56 Identities=16% Similarity=0.098 Sum_probs=41.3
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
.+++||+||||.+.... .....+.|++.++|+.|. ++++++|+|+++. ..+..++.
T Consensus 99 ~ll~lDyDGTL~PIv~~------------------P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~-~~l~~~~~ 154 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDD------------------PDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCR-EKVSSFVK 154 (354)
T ss_pred eEEEEecCccCCCCCCC------------------cccccCCHHHHHHHHHHh-cCCCEEEEECCCH-HHHHHHcC
Confidence 36777999999863222 223456789999999999 4589999999987 55555654
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00046 Score=60.27 Aligned_cols=99 Identities=9% Similarity=0.005 Sum_probs=69.0
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc-cce-----------------------eeEecCCc
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-FDH-----------------------KEIFPGQK 110 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~-fd~-----------------------~~~~~~~k 110 (171)
-++.|++.++++.|++.|+++.++|+-+. ..++...+.+|+... +.. ...+..-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHL-AIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 36789999999999999999999999876 888889999998641 100 00122222
Q ss_pred HHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 111 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
|+.=..+.+.++-.-+-+.|+||+.+|..+.+++.+- +.+..|.
T Consensus 520 Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gt 563 (755)
T TIGR01647 520 PEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGAT 563 (755)
T ss_pred HHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCc
Confidence 3222333444444456799999999999999998764 4444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00032 Score=55.56 Aligned_cols=49 Identities=24% Similarity=0.156 Sum_probs=37.6
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~ 84 (171)
..|+|.||=|+||++ .|..+.....++..|-.|-++|++|+|+|....+
T Consensus 146 ~L~LvTFDgDvTLY~---------------------DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~ 194 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYE---------------------DGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYP 194 (408)
T ss_pred CceEEEEcCCccccc---------------------CCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 578999999999976 2334445566777777788899999999976554
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00051 Score=60.88 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=67.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--ccc-----------------eeeEecCCcHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFD-----------------HKEIFPGQKTTHFA 115 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--~fd-----------------~~~~~~~~k~~~~~ 115 (171)
-++.|++.++++.|++.|+++.++|+-+. ..+....+.+|+.. ... ....+..-.|+.=.
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~-~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNE-IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 35688999999999999999999999866 88888999999962 110 00122222232223
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++.+.++-.-+.+.|+||+.+|..+.+++++. +.+..|.
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gt 631 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAA 631 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCcc
Confidence 33333333446799999999999999998864 3344443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00047 Score=59.95 Aligned_cols=84 Identities=13% Similarity=0.183 Sum_probs=64.7
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 134 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~ 134 (171)
-.+.|++..+++.||+.|++++++|+-+. ..++...+.+|+...+. +..|..|.+.++++.+ ....+.||||+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~a--ev~P~~K~~~Ik~lq~----~~~~VaMVGDG 794 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYA--EVLPEQKAEKIKEIQK----NGGPVAMVGDG 794 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEe--ccCchhhHHHHHHHHh----cCCcEEEEeCC
Confidence 34678999999999999999999999888 88888999999554332 3355666677777654 33779999999
Q ss_pred cccccccccCC
Q psy4436 135 ERNSHDVSPLG 145 (171)
Q Consensus 135 ~~di~~a~~~G 145 (171)
.||-.+.-++.
T Consensus 795 INDaPALA~Ad 805 (951)
T KOG0207|consen 795 INDAPALAQAD 805 (951)
T ss_pred CCccHHHHhhc
Confidence 99966655543
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00059 Score=60.66 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=68.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc-------cce------------eeEecCCcHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-------FDH------------KEIFPGQKTTHFA 115 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~-------fd~------------~~~~~~~k~~~~~ 115 (171)
-++.|++.++++.|++.|+++.++|+-+. ..+....+.+|+... ++. ...+..-.|+.=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSE-LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 35688999999999999999999999866 888889999999620 000 0122222333333
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++.+.++-.-+-+.|+||+.||..+.+++.+- +.+..|.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gt 666 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAV 666 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcC
Confidence 34444444456799999999999999998753 3343443
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00079 Score=60.22 Aligned_cols=90 Identities=8% Similarity=-0.042 Sum_probs=63.7
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc---------cc------------eeeEecCCcHHHH
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH---------FD------------HKEIFPGQKTTHF 114 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~---------fd------------~~~~~~~~k~~~~ 114 (171)
++.|++.++++.|++.|+++.++|+-.. ..+....+.+|+..- |+ ....+..-.|+.=
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNI-DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 6788999999999999999999999866 888889999998631 00 0012222223222
Q ss_pred HHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 115 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 115 ~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
..+.+.++-.-+-+.|+||+.+|..+.+++.+
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdV 689 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADV 689 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCc
Confidence 23333333334579999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00067 Score=60.35 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=68.3
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc-------cce------------eeEecCCcHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-------FDH------------KEIFPGQKTTHFA 115 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~-------fd~------------~~~~~~~k~~~~~ 115 (171)
-++.|++.++++.|++.|+++.++|+-+. ..+....+.+|+..- ++. ...+..-.|+.=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNP-IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 36788999999999999999999999866 888889999999620 000 0112222233233
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++.+.++-.-+-+.|+||+.+|..+.+++.+- +.+..|.
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gt 666 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGA 666 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCccc
Confidence 33344443456799999999999999998864 4444444
|
|
| >KOG1618|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0023 Score=49.71 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC----CcEEEEEcCCch---hHHHHHH
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN----NCLVAAASRTTE---MLRAHQL 90 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~i~i~S~~~~---~~~~~~~ 90 (171)
.++||+||+|.. +-.+.|++.++++.|.++ .++.+++||..- ...+..+
T Consensus 37 gfafDIDGVL~R------------------------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l 92 (389)
T KOG1618|consen 37 GFAFDIDGVLFR------------------------GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL 92 (389)
T ss_pred eEEEecccEEEe------------------------cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH
Confidence 699999999954 446689999999999998 799999998632 1233334
Q ss_pred HHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 91 VDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 91 l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
-+.++...- ..+.+.--.| |+.+. ....+.++.+|+.. --..|+..|++.+.
T Consensus 93 S~~Lgv~Vs--~dqviqSHsP--~r~l~---~~~~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 93 SALLGVEVS--ADQVIQSHSP--FRLLV---EYHYKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred HHhhCCccC--HHHHHhhcCh--HHHHh---hhhhceEEEecCCc-HHHHhhccCcccee
Confidence 444554411 1111111123 55554 24568999999543 34667778886554
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0028 Score=57.32 Aligned_cols=91 Identities=9% Similarity=-0.066 Sum_probs=64.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc---------c-ee---------------------e
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF---------D-HK---------------------E 104 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f---------d-~~---------------------~ 104 (171)
++.|++.++++.|++.|+++.++|+-.. ..+....+.+|+.... + .+ .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFP-ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 5688999999999999999999999866 8888899999985310 0 00 0
Q ss_pred EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 105 IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 105 ~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
.+..-.|+.=..+.+.++-.-+.+.|+||+.+|..+.+++++.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG 767 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG 767 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc
Confidence 1222223222333344443456789999999999999987753
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0049 Score=50.18 Aligned_cols=94 Identities=11% Similarity=0.020 Sum_probs=73.7
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCchh-HHHHHHHHhcCccccccee-----eEecCCcHHHHHHHHHHhCCCCCcEEEE
Q psy4436 58 YRDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATGIEYKDMVFF 131 (171)
Q Consensus 58 ~~~v~~~l~~L~~~g~~i~i~S~~~~~-~~~~~~l~~~~l~~~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~v 131 (171)
.....++.+.+.++|.+|+++|.--.| +..+.++...|.+.+--.+ .-..|.....|..+++..+++|...+.+
T Consensus 101 n~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~ 180 (635)
T COG5610 101 NKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHC 180 (635)
T ss_pred cccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEEe
Confidence 335667899999999999999985332 6677788888866322111 2234666788999999999999999999
Q ss_pred cCCcc-cccccccCCceEEEe
Q psy4436 132 DDEER-NSHDVSPLGVTCIHV 151 (171)
Q Consensus 132 gD~~~-di~~a~~~G~~~i~v 151 (171)
||+.+ |...++++|+.+...
T Consensus 181 GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 181 GDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred cCchhhhhcCccccchhHHHH
Confidence 99999 999999999987655
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0044 Score=55.90 Aligned_cols=91 Identities=8% Similarity=-0.007 Sum_probs=64.2
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc------------------------ee--------
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD------------------------HK-------- 103 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd------------------------~~-------- 103 (171)
++.|++.+++++|+++|+++.++|+.+. ..+....+.+|+..--. .+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~-~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 5688999999999999999999999977 77888988888842100 00
Q ss_pred ---------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 104 ---------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 104 ---------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
..+..-.|+.=.++.+.++-...-+.++||+.+|+.+.+++.+.
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVG 705 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcc
Confidence 02222233333334444444445789999999999999987753
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG1605|consensus | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.00053 Score=52.19 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=79.0
Q ss_pred CcEEEEeCCCCCCCceec-ccc-CCcceecCceeeccCCC--eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 16 PKLAVFDLDHTLWPFHVY-IDV-IPPFKKIGDKVLDAGGA--IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~-~~~-~~~~~~~~~~~~~~~~~--~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
-|++|+|+|+||...... ... ...|.- ...++.... -+.-.|++.++|..+.+. +.+++.|.+.. ..+..++
T Consensus 89 kk~lVLDLDeTLvHss~~~~~~~~~d~~~--~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~-~Ya~~v~ 164 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSLNLKPIVNADFTV--PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLE-VYADPLL 164 (262)
T ss_pred CceEEEeCCCcccccccccCCCCCcceee--eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhH-HHHHHHH
Confidence 479999999999876631 100 000000 111111111 234589999999999988 99999998866 7888888
Q ss_pred HhcCc-cccccee---eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 92 DLFNW-NQHFDHK---EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 92 ~~~~l-~~~fd~~---~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
..+.- ...|... +.+. -+...|-+-+...+-+..+++.|||++.....=-+.|+..-..
T Consensus 165 D~LD~~~~i~~~RlyR~~C~-~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw 227 (262)
T KOG1605|consen 165 DILDPDRKIISHRLYRDSCT-LKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSW 227 (262)
T ss_pred HHccCCCCeeeeeecccceE-eECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCccccc
Confidence 88875 3333222 1110 0111122222345668899999999999877666677654444
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.004 Score=46.69 Aligned_cols=86 Identities=14% Similarity=0.080 Sum_probs=62.9
Q ss_pred cEEEEEcCCchhHHHHHHHHhcCcccccceeeEec---CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 73 ~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
+-+.|.|+.-.|..++.+| +++..+|..-.+++ -.|...|++|.+++|-+.-..++|||+.....+|+..+|.++
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 4444444554545555443 45567787665555 456789999999999877889999999999999999999999
Q ss_pred EeCCCCcHHHH
Q psy4436 150 HVKDGMSHSVL 160 (171)
Q Consensus 150 ~v~~g~~~~~~ 160 (171)
-+.........
T Consensus 255 ~I~~h~Dl~~l 265 (274)
T TIGR01658 255 KIDLHPDSSHR 265 (274)
T ss_pred EeecCCCHHHh
Confidence 99665444433
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0044 Score=51.66 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=60.4
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.+.++.|++.|+++.++|+-.. ..+....+.+|+ | ....|..|....+.. .-....+.++||+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi---~--~~~~p~~K~~~v~~l----~~~g~~v~~vGDg~ 416 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI---F--ARVTPEEKAALVEAL----QKKGRVVAMTGDGV 416 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc---e--eccCHHHHHHHHHHH----HHCCCEEEEECCCh
Confidence 5688999999999999999999999877 777878888886 1 122233334334443 22337799999999
Q ss_pred ccccccccCCc
Q psy4436 136 RNSHDVSPLGV 146 (171)
Q Consensus 136 ~di~~a~~~G~ 146 (171)
+|..+.+.+++
T Consensus 417 nD~~al~~Adv 427 (499)
T TIGR01494 417 NDAPALKKADV 427 (499)
T ss_pred hhHHHHHhCCC
Confidence 99988877664
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG3189|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0034 Score=45.68 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=34.7
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
++.||+||||+. ...+..|.+.+.|+.|+.. +.++++-++..
T Consensus 13 l~lfdvdgtLt~-----------------------~r~~~~~e~~~~l~~lr~~-v~ig~VggsDl 54 (252)
T KOG3189|consen 13 LCLFDVDGTLTP-----------------------PRQKVTPEMLEFLQKLRKK-VTIGFVGGSDL 54 (252)
T ss_pred EEEEecCCcccc-----------------------ccccCCHHHHHHHHHHhhh-eEEEEeecHHH
Confidence 678899999965 2445689999999999877 99999998754
|
|
| >KOG2116|consensus | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0039 Score=52.58 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=73.9
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCC--chhHHHHHHHHhc
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT--TEMLRAHQLVDLF 94 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~--~~~~~~~~~l~~~ 94 (171)
|+||=|+|||++.+-+..++- -..+... ..-||..+....+++||++..+|.+ .+....++.|..+
T Consensus 531 kIVISDIDGTITKSDvLGh~l-----------p~iGkDW-Th~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv 598 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDVLGHVL-----------PMIGKDW-THTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNV 598 (738)
T ss_pred cEEEecCCCceEhhhhhhhhh-----------hhhcCcc-hhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHH
Confidence 688899999998755544321 1111122 2578999999999999999999975 2235566666665
Q ss_pred Ccccc--------------ccee---eEecCC---cHHHHHHHHHHhCCCCCcEE-EEcCCcccccccccCCceE
Q psy4436 95 NWNQH--------------FDHK---EIFPGQ---KTTHFANLKKATGIEYKDMV-FFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 95 ~l~~~--------------fd~~---~~~~~~---k~~~~~~~~~~~~~~~~~~l-~vgD~~~di~~a~~~G~~~ 148 (171)
.-..+ |... .+..+| |.+.+.-+.+-+.-+.+-.. -||.+..|+..-+++|+..
T Consensus 599 ~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 599 EQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred hhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 43321 1111 111233 22444444444442333333 3999999999999999853
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0057 Score=54.68 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=70.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc---eee--------------------EecCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD---HKE--------------------IFPGQK 110 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd---~~~--------------------~~~~~k 110 (171)
.-++.++++++++.|+++|+++.++|+-.. ..+..+.+.+|+..--. .++ .+..-.
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~-~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHV-ETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCH-HHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 457889999999999999999999999866 88888999998664321 111 111222
Q ss_pred HHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 111 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
|+.=.++.+.++-.-.-+.|.||+.||+.+-+++.+-......|
T Consensus 624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 43334444445545577999999999999999987654333333
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0036 Score=55.63 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=45.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
++++||+||||.+....... . ...+ ......+.|++.++|+.|.+. +-.++|+|+.+. +....++...+
T Consensus 592 RLlfLDyDGTLap~~~~P~~-----~-~~~~---~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~-~~Le~~fg~~~ 661 (934)
T PLN03064 592 RLLILGFNATLTEPVDTPGR-----R-GDQI---KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDR-SVLDENFGEFD 661 (934)
T ss_pred eEEEEecCceeccCCCCccc-----c-cccc---cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCH-HHHHHHhCCCC
Confidence 58888999999874322110 0 0000 001234668899999999875 688999999988 66776776643
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0043 Score=54.59 Aligned_cols=61 Identities=15% Similarity=0.006 Sum_probs=44.4
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHh
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
++++||+||||.+...... ......+.|++.++|++|.+. +-.++|+|+++. +....++..
T Consensus 508 rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~-~~L~~~~~~ 569 (797)
T PLN03063 508 RLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGK-DILDKNFGE 569 (797)
T ss_pred eEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCH-HHHHHHhCC
Confidence 5888999999986332110 011345678899999999875 788999999988 666767765
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0011 Score=48.27 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=13.3
Q ss_pred cEEEEeCCCCCCCcee
Q psy4436 17 KLAVFDLDHTLWPFHV 32 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~ 32 (171)
++|+||+||||+|+..
T Consensus 1 ~~viFD~DGTLiDs~~ 16 (197)
T TIGR01548 1 QALVLDMDGVMADVSQ 16 (197)
T ss_pred CceEEecCceEEechH
Confidence 3699999999998653
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.026 Score=49.30 Aligned_cols=91 Identities=9% Similarity=0.039 Sum_probs=69.2
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc-------------ee------------eEecCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-------------HK------------EIFPGQ 109 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd-------------~~------------~~~~~~ 109 (171)
-+|.|++.+.++.+++.|+++.++|+-+. ..+..+.+..|+...-+ .. ..+..-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~-~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNK-ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 46789999999999999999999999877 88888999998765222 11 011122
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
.|++=.++.+.++-.-+=+.|-||+.+|-.+.+++.+
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhccc
Confidence 3555566666666666778999999999999888765
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0077 Score=42.63 Aligned_cols=92 Identities=18% Similarity=0.256 Sum_probs=56.1
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCch--hHHHHHHHHhcCcccccceeeEec-CCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLVDLFNWNQHFDHKEIFP-GQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~--~~~~~~~l~~~~l~~~fd~~~~~~-~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
.+-.++...|..|++++ +++.+|..-. ......++..-++. |+..++.. ..|.+ ..+.++++ +|+.
T Consensus 72 l~~q~v~~~L~~~~e~~-~L~~itar~~dl~~iT~~~l~~q~ih--~~~l~i~g~h~KV~----~vrth~id----lf~e 140 (194)
T COG5663 72 LLAQLVKQVLPSLKEEH-RLIYITARKADLTRITYAWLFIQNIH--YDHLEIVGLHHKVE----AVRTHNID----LFFE 140 (194)
T ss_pred HHHHHHHHHhHHHHhhc-eeeeeehhhHHHHHHHHHHHHHhccc--hhhhhhhcccccch----hhHhhccC----cccc
Confidence 34557888888888884 4555554322 13344455554444 56554433 22332 23445554 7899
Q ss_pred CCccc-ccccccCCceEEEeCCCCcHH
Q psy4436 133 DEERN-SHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 133 D~~~d-i~~a~~~G~~~i~v~~g~~~~ 158 (171)
|+..+ +..|+++|++.+++...++.+
T Consensus 141 d~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 141 DSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred ccCchHHHHHHhcCCcEEEecCccccc
Confidence 99986 677777999999997655533
|
|
| >KOG2470|consensus | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0072 Score=47.69 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=65.6
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc---CcccccceeeE-ecCCc---------------------
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHKEI-FPGQK--------------------- 110 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~---~l~~~fd~~~~-~~~~k--------------------- 110 (171)
...|....++.+|+++|.++.++||++. .++..-+..+ .+.+.||.+.. ..||+
T Consensus 240 ~r~~ql~~fl~kL~~~GKklFLiTNSPy-sFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w 318 (510)
T KOG2470|consen 240 ERNPQLLAFLRKLKDHGKKLFLITNSPY-SFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW 318 (510)
T ss_pred hccHHHHHHHHHHHHhcCcEEEEeCCch-hhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence 3456677889999999999999999988 6665444443 34456665511 11110
Q ss_pred -------------HHHHHHHHHHhCCCCCcEEEEcCCcc-cccccc-cCCceEEEe
Q psy4436 111 -------------TTHFANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHV 151 (171)
Q Consensus 111 -------------~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~-~~G~~~i~v 151 (171)
-......++-.+..-.+++||||... |+.... +.||.+-++
T Consensus 319 dkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 319 DKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 02245566667888889999999998 876665 789877666
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.045 Score=49.81 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=36.9
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
++.|++.++++.|++.|+++.++|+-+. ..+....+.+|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~-~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNP-LTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence 5789999999999999999999999866 7888888888884
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.026 Score=42.67 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=53.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc----------ccc---eeeEecCC------cHH-
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ----------HFD---HKEIFPGQ------KTT- 112 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~----------~fd---~~~~~~~~------k~~- 112 (171)
....+.+|+.++++.|+++++++.|+|.+-. +.....+++.+... .|| ...++..| |-+
T Consensus 87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlg-dvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~ 165 (246)
T PF05822_consen 87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLG-DVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNES 165 (246)
T ss_dssp S---B-BTHHHHHHHHHCTT--EEEEEEEEH-HHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHH
T ss_pred cchhhhcCHHHHHHHHHhcCCCEEEEeCCcH-HHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcc
Confidence 3577899999999999999999999998866 88888898875442 222 11333333 111
Q ss_pred HHH--HHHHHhCCCCCcEEEEcCCcccccccccC
Q psy4436 113 HFA--NLKKATGIEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 113 ~~~--~~~~~~~~~~~~~l~vgD~~~di~~a~~~ 144 (171)
.+. ...+++ -...+++.+||+..|+.+|..+
T Consensus 166 ~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 166 ALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred cccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 111 111111 1356899999999999998776
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.058 Score=44.90 Aligned_cols=92 Identities=9% Similarity=0.064 Sum_probs=67.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
...||.++-+.+|++.|++.+.||+-+. -.+..+.+..|+++|.-. . +|+-=....++.+-.-+=+.|.||+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~-~TAa~IA~EAGVDdfiAe--a----tPEdK~~~I~~eQ~~grlVAMtGDGT 519 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFIAE--A----TPEDKLALIRQEQAEGRLVAMTGDGT 519 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHhCchhhhhc--C----ChHHHHHHHHHHHhcCcEEEEcCCCC
Confidence 3578999999999999999999999876 677778888898866422 2 34333444455666667788999999
Q ss_pred ccccccccCCceEEEeCCCC
Q psy4436 136 RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g~ 155 (171)
+|-.+..++.+ .+..+.|+
T Consensus 520 NDAPALAqAdV-g~AMNsGT 538 (681)
T COG2216 520 NDAPALAQADV-GVAMNSGT 538 (681)
T ss_pred Ccchhhhhcch-hhhhcccc
Confidence 99887777663 23445554
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.018 Score=43.68 Aligned_cols=125 Identities=18% Similarity=0.114 Sum_probs=68.0
Q ss_pred EEEeCCCCCCCceeccccC-CcceecCceeeccCCCeee----eCCCHHHHHHHHhhC------CcEEEEEcCCchhHHH
Q psy4436 19 AVFDLDHTLWPFHVYIDVI-PPFKKIGDKVLDAGGAIIK----YYRDVPAILKYLKQN------NCLVAAASRTTEMLRA 87 (171)
Q Consensus 19 vvfDlDgTL~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~v~~~l~~L~~~------g~~i~i~S~~~~~~~~ 87 (171)
|.||.|++|.+.+.....- ..+.... -.+......+ ++......|.+|++. -++++++|.++.|...
T Consensus 124 IAFDgDaVLfsDesE~vy~~~GL~~F~--~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~ 201 (264)
T PF06189_consen 124 IAFDGDAVLFSDESERVYQEQGLEAFH--EHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHE 201 (264)
T ss_pred EEEcCCeEeecCcchHhHHhccHHHHH--HHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhH
Confidence 8999999998766542110 0000000 0000001111 233344555555543 4889999987665443
Q ss_pred H--HHHHhcCcccccceeeE-ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 88 H--QLVDLFNWNQHFDHKEI-FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 88 ~--~~l~~~~l~~~fd~~~~-~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+ .-|+..|+. .|..-. ..-+|.. +++.++- =+||||...++..|. .++.+.+|+.|..
T Consensus 202 RvI~TLr~Wgv~--vDEafFLgG~~K~~----vL~~~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 202 RVIRTLRSWGVR--VDEAFFLGGLPKGP----VLKAFRP----HIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred HHHHHHHHcCCc--HhHHHHhCCCchhH----HHHhhCC----CEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 3 133344544 332211 1133432 2333432 389999999999999 6899999988764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG3107|consensus | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.054 Score=43.24 Aligned_cols=91 Identities=15% Similarity=0.207 Sum_probs=64.4
Q ss_pred cEEEEEcCC-chhHHHHHHHHhcCcccccceeeEec---CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceE
Q psy4436 73 CLVAAASRT-TEMLRAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 73 ~~i~i~S~~-~~~~~~~~~l~~~~l~~~fd~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
+.=+++|+. -.|..++-+| .||...|....+++ --|-..|++|.+++|- .-.-+.|||+.....+|++..|.+
T Consensus 371 cvnVlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf 447 (468)
T KOG3107|consen 371 CVNVLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF 447 (468)
T ss_pred eeEEEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence 334555554 2333333333 45556676555554 3456889999999997 456777999999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHH
Q psy4436 149 IHVKDGMSHSVLHKGLKQ 166 (171)
Q Consensus 149 i~v~~g~~~~~~~~~~~~ 166 (171)
+-+........+..+|+.
T Consensus 448 wrI~~h~Dl~~l~~aL~~ 465 (468)
T KOG3107|consen 448 WRISSHSDLDALYSALEL 465 (468)
T ss_pred EeeccCccHHHHhhhccc
Confidence 999877777777777653
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.019 Score=42.89 Aligned_cols=42 Identities=12% Similarity=0.082 Sum_probs=34.8
Q ss_pred CCcHHHHHHHHHHhCC--CCCcEEEEcCCcccccccccCCceEE
Q psy4436 108 GQKTTHFANLKKATGI--EYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~--~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
-.|+...+.+++.+++ ++.++++|||+.+|+.+.+.+|...+
T Consensus 180 ~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 180 SDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 4566778888888866 67789999999999999999997543
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.083 Score=41.37 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=64.8
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCC-cEEEEEcCCchhHHHH---HHHHh
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAH---QLVDL 93 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~~~~~---~~l~~ 93 (171)
.+|=|+|+|+...++....-. ....+. .......++|||..+.+.|.+.| .++..+||++. ..-. +++..
T Consensus 163 giISDiDDTV~~T~V~~~~r~----~~~s~~-l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw-~~f~~L~efi~~ 236 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRK----AGRSLL-LHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPW-QLFPTLQEFITN 236 (373)
T ss_pred eeeeccccceEecccccchHH----HHHHhh-hcccccCCCCCHHHHHHHHHhcCCCCeEEecCChh-HhHHHHHHHHhc
Confidence 367799999987666532100 000000 01224578999999999999998 89999999876 4433 22222
Q ss_pred cCccc----------ccceee-EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cc
Q psy4436 94 FNWNQ----------HFDHKE-IFPGQKTTHFANLKKATGIEYKDMVFFDDEER-NS 138 (171)
Q Consensus 94 ~~l~~----------~fd~~~-~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di 138 (171)
.++.. .|+.+. ....-|......+++++ +-...+.|||+-. |.
T Consensus 237 ~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~--p~~kfvLVGDsGE~Dp 291 (373)
T COG4850 237 RNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRY--PDRKFVLVGDSGEHDP 291 (373)
T ss_pred CCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhC--CCceEEEecCCCCcCH
Confidence 23331 112210 01122334456566655 4567888888766 53
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.023 Score=46.12 Aligned_cols=122 Identities=16% Similarity=0.079 Sum_probs=70.7
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--hHHHHHHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLV 91 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~--~~~~~~~l 91 (171)
...++||+|+||||+.+-+..++. .-.+ ..=-.-||..+--...++||+|..+|.++. ....+..+
T Consensus 373 ~n~kiVVsDiDGTITkSD~~Ghv~-----------~miG-kdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsyl 440 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDALGHVK-----------QMIG-KDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYL 440 (580)
T ss_pred CCCcEEEEecCCcEEehhhHHHHH-----------HHhc-cchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHH
Confidence 346899999999998654432210 0011 111246788888888899999999887543 12333333
Q ss_pred HhcCccccc--ce-e--------------eEecCCcH--HHHHHHHHHhCCCCCcEE-EEcCCcccccccccCCce
Q psy4436 92 DLFNWNQHF--DH-K--------------EIFPGQKT--THFANLKKATGIEYKDMV-FFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 92 ~~~~l~~~f--d~-~--------------~~~~~~k~--~~~~~~~~~~~~~~~~~l-~vgD~~~di~~a~~~G~~ 147 (171)
....-..|- +. + .+..+|.. ..|..-++.+...+.-.. =||.+..|+.+-+.+|+.
T Consensus 441 rnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 441 RNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 332222211 10 0 01123332 334555566666666544 489999999999999974
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.15 Score=46.47 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=34.7
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
-++.|++.++++.|++.|+++.++|+-.. ..+.......++.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCCC
Confidence 35789999999999999999999999765 6777676666654
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG2469|consensus | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.26 Score=39.81 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=66.1
Q ss_pred eCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh---cCcccccceeeEec-CCc----------------------
Q psy4436 57 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL---FNWNQHFDHKEIFP-GQK---------------------- 110 (171)
Q Consensus 57 ~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~---~~l~~~fd~~~~~~-~~k---------------------- 110 (171)
..+.....|..+++.|.+..+.||+.. ......+.. .++..+|+.+.... ||+
T Consensus 199 ~d~~~v~~l~~~r~sGKk~fl~Tns~~-~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 199 YDGTIVPLLSMLRDSGKKTFLHTNSDW-DYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred ecCccccchHHHHhhccceEEeecccc-chhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccc
Confidence 344455589999999999999999866 555444444 35666776653221 221
Q ss_pred ------------HHHHHHHHHHhCCCCCcEEEEcCCcc-cc-cccccCCceEEEeCCC
Q psy4436 111 ------------TTHFANLKKATGIEYKDMVFFDDEER-NS-HDVSPLGVTCIHVKDG 154 (171)
Q Consensus 111 ------------~~~~~~~~~~~~~~~~~~l~vgD~~~-di-~~a~~~G~~~i~v~~g 154 (171)
+.....+...+++...+++|+||+.+ |+ ..-+..|+.++++...
T Consensus 278 ~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 278 NTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred cCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 12345556677888899999999999 64 4555589999988553
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.033 Score=40.51 Aligned_cols=17 Identities=24% Similarity=0.079 Sum_probs=13.7
Q ss_pred CcEEEEeCCCCCCCcee
Q psy4436 16 PKLAVFDLDHTLWPFHV 32 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~ 32 (171)
+++|+||.||||+....
T Consensus 1 i~~i~fDktGTLt~~~~ 17 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKM 17 (215)
T ss_dssp ESEEEEECCTTTBESHH
T ss_pred CeEEEEecCCCcccCeE
Confidence 47899999999986443
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.21 Score=37.46 Aligned_cols=44 Identities=7% Similarity=0.005 Sum_probs=31.1
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ 98 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~ 98 (171)
...++.||+.+.++.|.+. +.-.++|.+-. +.++.....+|++.
T Consensus 80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~-qy~~r~a~~ig~Pr 123 (315)
T COG4030 80 LSAKLVPGAEETMATLQER-WTPVVISTSYT-QYLRRTASMIGVPR 123 (315)
T ss_pred hhcccCCChHHHHHHHhcc-CCceEEeccHH-HHHHHHHHhcCCCc
Confidence 3467899999999999988 44445555434 66676777777743
|
|
| >PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.39 Score=32.96 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=42.8
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCC-chhHHHHHHHHhcC
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT-TEMLRAHQLVDLFN 95 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~-~~~~~~~~~l~~~~ 95 (171)
.+.++||||.|+...+.. .-...++++.+.+.|.++.|+|.- +-|+.++.+-..++
T Consensus 44 giAildL~G~~l~l~S~R-----------------------~~~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~ 100 (138)
T PF04312_consen 44 GIAILDLDGELLDLKSSR-----------------------NMSRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFN 100 (138)
T ss_pred EEEEEecCCcEEEEEeec-----------------------CCCHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhC
Confidence 578999999997754432 234678999999999999999963 44577776655555
Q ss_pred cc
Q psy4436 96 WN 97 (171)
Q Consensus 96 l~ 97 (171)
-.
T Consensus 101 A~ 102 (138)
T PF04312_consen 101 AV 102 (138)
T ss_pred Cc
Confidence 44
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.04 Score=39.43 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.7
Q ss_pred EEEeCCCCCCCce
Q psy4436 19 AVFDLDHTLWPFH 31 (171)
Q Consensus 19 vvfDlDgTL~~~~ 31 (171)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999866
|
|
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.27 Score=38.26 Aligned_cols=35 Identities=6% Similarity=-0.006 Sum_probs=29.6
Q ss_pred eeeeCCCHHHHHHHHhhCC-cEEEEEcCCchhHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAH 88 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~~~~~ 88 (171)
+-.++|...++++.+|+.| ++++++||+..++..+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~ 125 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLE 125 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHH
Confidence 4566999999999999999 7999999998855444
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.36 Score=42.59 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=34.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ 98 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~ 98 (171)
.+++.|+.+..|++|.+.+.+++.+|+-+- -.+....+.+++..
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnp-LTAchVak~v~iv~ 716 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNP-LTACHVAKEVGIVE 716 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCc-cchheehheeeeec
Confidence 356789999999999999999999998654 55555666666654
|
|
| >KOG2832|consensus | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.96 Score=36.12 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=72.0
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+=.+|+||.++|+...+.-. .+-.+.-.||+.-+|..+- ..+.|++.|.... ..+..++++++
T Consensus 189 ~yTLVleledvLVhpdws~~---------------tGwRf~kRPgvD~FL~~~a-~~yEIVi~sse~g-mt~~pl~d~lD 251 (393)
T KOG2832|consen 189 PYTLVLELEDVLVHPDWSYK---------------TGWRFKKRPGVDYFLGHLA-KYYEIVVYSSEQG-MTVFPLLDALD 251 (393)
T ss_pred CceEEEEeeeeEeccchhhh---------------cCceeccCchHHHHHHhhc-ccceEEEEecCCc-cchhhhHhhcC
Confidence 34799999999986544311 2345666899999999998 5599999999876 77787899988
Q ss_pred cccccceeeEe--cCC-cHHHHHHHHHHhCCCCCcEEEEcCCcc
Q psy4436 96 WNQHFDHKEIF--PGQ-KTTHFANLKKATGIEYKDMVFFDDEER 136 (171)
Q Consensus 96 l~~~fd~~~~~--~~~-k~~~~~~~~~~~~~~~~~~l~vgD~~~ 136 (171)
-..+..+.-.. .+- .+.+ .+=+.++|=++..+++|+=..+
T Consensus 252 P~g~IsYkLfr~~t~y~~G~H-vKdls~LNRdl~kVivVd~d~~ 294 (393)
T KOG2832|consen 252 PKGYISYKLFRGATKYEEGHH-VKDLSKLNRDLQKVIVVDFDAN 294 (393)
T ss_pred CcceEEEEEecCcccccCccc-hhhhhhhccccceeEEEEcccc
Confidence 77555444111 111 1122 2235678889999999987666
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=91.53 E-value=2.7 Score=38.44 Aligned_cols=45 Identities=20% Similarity=0.332 Sum_probs=33.9
Q ss_pred CCcHHHHHHHHHHhCCCCCcE-EEEcCCcc-cccccccCCc-eEEEeCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDM-VFFDDEER-NSHDVSPLGV-TCIHVKD 153 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~-l~vgD~~~-di~~a~~~G~-~~i~v~~ 153 (171)
-.|...++++..+++++.+++ +|+||+-+ |...... |. .++.++.
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~-G~~~tvi~~g 1002 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLG-GLHKTVILKG 1002 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhC-CceeEEEEec
Confidence 346788999999999999999 66999999 9665533 54 4555544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=90.99 E-value=1.2 Score=39.58 Aligned_cols=95 Identities=12% Similarity=0.002 Sum_probs=61.8
Q ss_pred CCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc---eeeE--------------ec------C
Q psy4436 52 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD---HKEI--------------FP------G 108 (171)
Q Consensus 52 ~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd---~~~~--------------~~------~ 108 (171)
+-+-+..|||+++++..+..|+.+..+|+.+. ..++.+....|+...=+ .+++ +| .
T Consensus 643 GIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI-~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR 721 (1034)
T KOG0204|consen 643 GIKDPVRPGVPEAVQLCQRAGITVRMVTGDNI-NTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR 721 (1034)
T ss_pred eccCCCCCCcHHHHHHHHHcCcEEEEEeCCcH-HHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeec
Confidence 34557789999999999999999999999888 88888888888764221 1111 11 1
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
..|.-=+.+.+.+.-.-+-+..-||+.+|-.+.+++.+-
T Consensus 722 SSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVG 760 (1034)
T KOG0204|consen 722 SSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVG 760 (1034)
T ss_pred CCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccc
Confidence 111101111122222223455679999999999987653
|
|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=90.73 E-value=2.3 Score=32.28 Aligned_cols=100 Identities=10% Similarity=-0.013 Sum_probs=66.6
Q ss_pred cCCCeeeeCCCHHHHHHHHhhC---CcEEE-EEcCCchhHHHHHHHHhcCcccccc--e-e-eEecCCcHHHHHHHHHHh
Q psy4436 50 AGGAIIKYYRDVPAILKYLKQN---NCLVA-AASRTTEMLRAHQLVDLFNWNQHFD--H-K-EIFPGQKTTHFANLKKAT 121 (171)
Q Consensus 50 ~~~~~~~~~~~v~~~l~~L~~~---g~~i~-i~S~~~~~~~~~~~l~~~~l~~~fd--~-~-~~~~~~k~~~~~~~~~~~ 121 (171)
-.++...++|+..++++..++. |+.+. +|++.. ..++ .+..+|-..... . + ....-..++.++.+.+..
T Consensus 98 Vi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~--~~ar-~l~~~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~ 174 (248)
T cd04728 98 VIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDP--VLAK-RLEDAGCAAVMPLGSPIGSGQGLLNPYNLRIIIERA 174 (248)
T ss_pred EecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCH--HHHH-HHHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhC
Confidence 3445667889999988777766 99999 777764 4444 666666443221 0 1 111122467777776653
Q ss_pred CCCCCcEEEEcCCcc---cccccccCCceEEEeCCCCc
Q psy4436 122 GIEYKDMVFFDDEER---NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 122 ~~~~~~~l~vgD~~~---di~~a~~~G~~~i~v~~g~~ 156 (171)
+ --+++|-+.. |+..|-++|...+.+..+..
T Consensus 175 ~----vpVI~egGI~tpeda~~AmelGAdgVlV~SAIt 208 (248)
T cd04728 175 D----VPVIVDAGIGTPSDAAQAMELGADAVLLNTAIA 208 (248)
T ss_pred C----CcEEEeCCCCCHHHHHHHHHcCCCEEEEChHhc
Confidence 3 3477777665 88999999999999988765
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=90.36 E-value=2.5 Score=32.13 Aligned_cols=99 Identities=10% Similarity=0.003 Sum_probs=65.6
Q ss_pred CCCeeeeCCCHHHHHHHHhhC---CcEEE-EEcCCchhHHHHHHHHhcCcccccc--e-e-eEecCCcHHHHHHHHHHhC
Q psy4436 51 GGAIIKYYRDVPAILKYLKQN---NCLVA-AASRTTEMLRAHQLVDLFNWNQHFD--H-K-EIFPGQKTTHFANLKKATG 122 (171)
Q Consensus 51 ~~~~~~~~~~v~~~l~~L~~~---g~~i~-i~S~~~~~~~~~~~l~~~~l~~~fd--~-~-~~~~~~k~~~~~~~~~~~~ 122 (171)
.++...++|+..++++..++. |+.+. +|++... .++ .+..+|-..... . + ...+-..++.++.+.+..+
T Consensus 99 i~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~--~ak-~l~~~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~ 175 (250)
T PRK00208 99 IGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPV--LAK-RLEEAGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQAD 175 (250)
T ss_pred ecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH--HHH-HHHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcC
Confidence 444566788888888777766 99999 8887643 444 666766443211 0 1 1111224666676666543
Q ss_pred CCCCcEEEEcCCcc---cccccccCCceEEEeCCCCc
Q psy4436 123 IEYKDMVFFDDEER---NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 123 ~~~~~~l~vgD~~~---di~~a~~~G~~~i~v~~g~~ 156 (171)
--+.+|-+.. |+..|-++|...+.+..+..
T Consensus 176 ----vpVIveaGI~tpeda~~AmelGAdgVlV~SAIt 208 (250)
T PRK00208 176 ----VPVIVDAGIGTPSDAAQAMELGADAVLLNTAIA 208 (250)
T ss_pred ----CeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhh
Confidence 3477887766 88899999999999988765
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.7 Score=40.15 Aligned_cols=87 Identities=18% Similarity=0.140 Sum_probs=56.7
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc-------------------------------------
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ------------------------------------- 98 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~------------------------------------- 98 (171)
++.++|+..|+.|++.|+++..+|+--. +.+....+..++-.
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKl-ETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~ 736 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKL-ETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGE 736 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcch-hheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCc
Confidence 4567888899999999999999999644 44443444433332
Q ss_pred ------------ccc------eeeEe---cCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 99 ------------HFD------HKEIF---PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 99 ------------~fd------~~~~~---~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
+++ .+..+ |..|....+.+.++.+ ..+..|||+-+|+.+.+++.+
T Consensus 737 Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~ 802 (1051)
T KOG0210|consen 737 SLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADV 802 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeeccc
Confidence 111 11111 2445555555555554 788899999999888777553
|
|
| >PRK08005 epimerase; Validated | Back alignment and domain information |
|---|
Probab=89.48 E-value=2.5 Score=31.34 Aligned_cols=110 Identities=8% Similarity=-0.004 Sum_probs=65.0
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCchh-HHHHHHHHhcCcccccceeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 59 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 59 ~~v~~~l~~L~~~g~~i~i~S~~~~~-~~~~~~l~~~~l~~~fd~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
+...++|+.+|+.|.+.+++=|...+ +.....+...+.--....--++. +--+..++++.+--...++.-+-||-+.
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~~vD~VlvMsV~PGf~GQ~f~~~~~~KI~~l~~~~~~~~I~VDGGI 172 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFPAAECWADGGI 172 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHhcCEEEEEEecCCCccceecHHHHHHHHHHHHhcccCCEEEECCC
Confidence 45678999999999999998875332 33444444433221111111122 2234556666653333333248888888
Q ss_pred c--cccccccCCceEEEeCCC-CcHHHHHHHHHHhh
Q psy4436 136 R--NSHDVSPLGVTCIHVKDG-MSHSVLHKGLKQWA 168 (171)
Q Consensus 136 ~--di~~a~~~G~~~i~v~~g-~~~~~~~~~~~~~~ 168 (171)
+ ++....++|+..+.+..+ +..+...+.+++|.
T Consensus 173 ~~~~i~~l~~aGad~~V~GsaiF~~~d~~~~~~~~~ 208 (210)
T PRK08005 173 TLRAARLLAAAGAQHLVIGRALFTTANYDVTLSQFT 208 (210)
T ss_pred CHHHHHHHHHCCCCEEEEChHhhCCCCHHHHHHHHh
Confidence 8 677888899987777543 23334566666664
|
|
| >KOG3128|consensus | Back alignment and domain information |
|---|
Probab=87.85 E-value=1.9 Score=32.85 Aligned_cols=89 Identities=10% Similarity=0.038 Sum_probs=53.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc-Cccc--cc-------c--ee-eEecCCcH-------HHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-NWNQ--HF-------D--HK-EIFPGQKT-------THF 114 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~-~l~~--~f-------d--~~-~~~~~~k~-------~~~ 114 (171)
..+.+|..++...|+++++++.|.|.+-. +....++... ++.. +| + .. ..+..|-- ...
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGig-diiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIG-DIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchH-HHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 34567899999999999999999998755 5555555543 2221 11 1 10 11221111 112
Q ss_pred HHHHHHhC--CCCCcEEEEcCCcccccccccC
Q psy4436 115 ANLKKATG--IEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 115 ~~~~~~~~--~~~~~~l~vgD~~~di~~a~~~ 144 (171)
+...+.+. -....+++.||+..|+.+|.-+
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 22222222 3456899999999999887653
|
|
| >COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.70 E-value=5.6 Score=29.68 Aligned_cols=112 Identities=4% Similarity=0.025 Sum_probs=66.9
Q ss_pred eCCCHHHHHHHHhhCCcEEEEEcCCchh-HHHHHHHHhcCcccccceeeEec--CCcHHHHHHHHHHhCCCC---CcEEE
Q psy4436 57 YYRDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKKATGIEY---KDMVF 130 (171)
Q Consensus 57 ~~~~v~~~l~~L~~~g~~i~i~S~~~~~-~~~~~~l~~~~l~~~fd~~~~~~--~~k~~~~~~~~~~~~~~~---~~~l~ 130 (171)
..+...++|+.+|+.|++.+++=|-..| +....+++.+++--..+.--++. +--++.++++.+--..-. +-.+-
T Consensus 94 ~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~~~~Ie 173 (220)
T COG0036 94 ATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDERLDILIE 173 (220)
T ss_pred cCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEeECCCCcccccCHHHHHHHHHHHHHhcccCCeEEE
Confidence 5678889999999999999988875332 55566676666543222212222 222444555443222211 34566
Q ss_pred EcCCcc--cccccccCCceEEEeCCC-CcHHHHHHHHHHhh
Q psy4436 131 FDDEER--NSHDVSPLGVTCIHVKDG-MSHSVLHKGLKQWA 168 (171)
Q Consensus 131 vgD~~~--di~~a~~~G~~~i~v~~g-~~~~~~~~~~~~~~ 168 (171)
||-+.+ .+..+.++|...+....+ +....+...++.|.
T Consensus 174 VDGGI~~~t~~~~~~AGad~~VaGSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 174 VDGGINLETIKQLAAAGADVFVAGSALFGADDYKATIRELR 214 (220)
T ss_pred EeCCcCHHHHHHHHHcCCCEEEEEEEEeCCccHHHHHHHHH
Confidence 887777 577778899987777442 33333555555554
|
|
| >TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR | Back alignment and domain information |
|---|
Probab=85.82 E-value=6.7 Score=33.29 Aligned_cols=88 Identities=7% Similarity=-0.034 Sum_probs=53.8
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 60 DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 60 ~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
++..+|+..++.+-++++++..+....++.+.+-+++. +. .+.-...+-....++++.-. .--++|||... +.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~---~~~~~~~~e~~~~~~~l~~~-G~~~viG~~~~-~~ 157 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IV---QRSYVTEEDARSCVNDLRAR-GIGAVVGAGLI-TD 157 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eE---EEEecCHHHHHHHHHHHHHC-CCCEEECChHH-HH
Confidence 45666666677778899998765545566566666655 22 22211222233333333221 12467899965 68
Q ss_pred ccccCCceEEEeCCC
Q psy4436 140 DVSPLGVTCIHVKDG 154 (171)
Q Consensus 140 ~a~~~G~~~i~v~~g 154 (171)
.|++.|++++.+..+
T Consensus 158 ~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 158 LAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHcCCceEEEecH
Confidence 889999999999765
|
At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR. |
| >TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein | Back alignment and domain information |
|---|
Probab=85.62 E-value=8.3 Score=27.58 Aligned_cols=36 Identities=8% Similarity=0.049 Sum_probs=28.6
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHH
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 88 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~ 88 (171)
.+..+.+.+.++++.+++.|+.+.+.||...++...
T Consensus 71 GEPll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~ 106 (191)
T TIGR02495 71 GEPTLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLE 106 (191)
T ss_pred CcccCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHH
Confidence 344556779999999999999999999997644444
|
This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=84.24 E-value=0.59 Score=39.20 Aligned_cols=80 Identities=9% Similarity=0.021 Sum_probs=48.7
Q ss_pred HHHHHhhCCcEEEEEcCCchhHHHHHHHHh-cCcccccc--------ee-eE-ecCCc----HHHHHHHHHHhCCCCCcE
Q psy4436 64 ILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFD--------HK-EI-FPGQK----TTHFANLKKATGIEYKDM 128 (171)
Q Consensus 64 ~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~-~~l~~~fd--------~~-~~-~~~~k----~~~~~~~~~~~~~~~~~~ 128 (171)
.++.++++|.. +++|.++. ..++.+.+. +|++.... .. .+ ...+. .+-...+.+.++.+...
T Consensus 115 a~~~~~~~g~~-vvVSASp~-~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~- 191 (497)
T PLN02177 115 TWRVFNSFGKR-YIITASPR-IMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD- 191 (497)
T ss_pred HHHHHHhCCCE-EEEECCcH-HHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-
Confidence 34455667765 99999988 788888865 67774321 11 00 01111 11233333556654444
Q ss_pred EEEcCCcccccccccCCc
Q psy4436 129 VFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~ 146 (171)
++.||+..|......++-
T Consensus 192 ~aYgDS~sD~plL~~a~e 209 (497)
T PLN02177 192 LGLGDRETDHDFMSICKE 209 (497)
T ss_pred EEEECCccHHHHHHhCCc
Confidence 899999999988888773
|
|
| >KOG0323|consensus | Back alignment and domain information |
|---|
Probab=83.11 E-value=5.2 Score=34.57 Aligned_cols=85 Identities=16% Similarity=0.057 Sum_probs=57.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHHHHhCCCCC---cEE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKATGIEYK---DMV 129 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~~~~~~---~~l 129 (171)
-+++.|++.++|+++.+. +.+.|+|-+.+ ..+..+++-+.-.. ||.......+..+ +.+...-....|. -++
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R-~YA~~i~~liDP~~~lF~dRIisrde~~--~~kt~dL~~~~p~g~smvv 274 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTR-DYALEIAKLIDPEGKYFGDRIISRDESP--FFKTLDLVLLFPCGDSMVV 274 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccch-HHHHHHHHHhCCCCccccceEEEecCCC--cccccccccCCCCCCccEE
Confidence 468899999999999988 99999999988 88887877776553 6665434444333 3333332233333 388
Q ss_pred EEcCCcccccccc
Q psy4436 130 FFDDEERNSHDVS 142 (171)
Q Consensus 130 ~vgD~~~di~~a~ 142 (171)
.|+|+..--.-..
T Consensus 275 IIDDr~dVW~~~~ 287 (635)
T KOG0323|consen 275 IIDDRSDVWPDHK 287 (635)
T ss_pred EEeCccccccCCC
Confidence 8888876444444
|
|
| >PRK08745 ribulose-phosphate 3-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=82.58 E-value=9.2 Score=28.61 Aligned_cols=95 Identities=9% Similarity=0.088 Sum_probs=55.0
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCchh-HHHHHHHHhcCcccccceeeEec--CCcHHHHHHHHH--Hh-C-CCCCcEEEE
Q psy4436 59 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKK--AT-G-IEYKDMVFF 131 (171)
Q Consensus 59 ~~v~~~l~~L~~~g~~i~i~S~~~~~-~~~~~~l~~~~l~~~fd~~~~~~--~~k~~~~~~~~~--~~-~-~~~~~~l~v 131 (171)
+...++|+.+|+.|++.+++=|...+ +.....+...+.--....--++. +--+..++++.+ ++ . -.++--+.|
T Consensus 97 ~~~~~~l~~Ir~~g~k~GlalnP~T~~~~i~~~l~~vD~VlvMtV~PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeV 176 (223)
T PRK08745 97 RHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEI 176 (223)
T ss_pred ccHHHHHHHHHHCCCceeEEeCCCCCHHHHHHHHhhcCEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEE
Confidence 45788999999999999999886432 33444444433221111111122 222333444432 11 1 123455788
Q ss_pred cCCcc--cccccccCCceEEEeCC
Q psy4436 132 DDEER--NSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 132 gD~~~--di~~a~~~G~~~i~v~~ 153 (171)
+-+.+ .+....++|+..+.+..
T Consensus 177 DGGI~~eti~~l~~aGaDi~V~GS 200 (223)
T PRK08745 177 DGGVKADNIGAIAAAGADTFVAGS 200 (223)
T ss_pred ECCCCHHHHHHHHHcCCCEEEECh
Confidence 88887 67788889998777754
|
|
| >COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=82.41 E-value=8.6 Score=29.89 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHhhCCcE---------EEEEcCCchhHHHHHHHHhcCcccccceeeEec-CCcHHHHHHHHHHhCCCCCc
Q psy4436 58 YRDVPAILKYLKQNNCL---------VAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-GQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 58 ~~~v~~~l~~L~~~g~~---------i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~-~~k~~~~~~~~~~~~~~~~~ 127 (171)
.++..++++.|++. ++ ||.+|-+.+ +.++.+.+..++- .+.+-+ -+...-+..+.++.+. +.-
T Consensus 170 ~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~nRQ-~Avk~la~~~Dl~----iVVG~~nSSNs~rL~eiA~~~g~-~ay 242 (294)
T COG0761 170 VDDTAEIVAALKER-FPKIEVPPFNDICYATQNRQ-DAVKELAPEVDLV----IVVGSKNSSNSNRLAEIAKRHGK-PAY 242 (294)
T ss_pred HHHHHHHHHHHHHh-CccccCCcccccchhhhhHH-HHHHHHhhcCCEE----EEECCCCCccHHHHHHHHHHhCC-CeE
Confidence 34566777777776 44 777776655 5555555544432 111222 2234557788888887 444
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
.+ |+..|++..+=.|..++.++-|.+
T Consensus 243 lI---d~~~ei~~~w~~~~~~VGvTAGAS 268 (294)
T COG0761 243 LI---DDAEEIDPEWLKGVKTVGVTAGAS 268 (294)
T ss_pred Ee---CChHhCCHHHhcCccEEEEecCCC
Confidence 44 778899999999999999988765
|
|
| >PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=82.17 E-value=3 Score=31.76 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCC--cEEEEcCCcc-cccccccCCceEEE
Q psy4436 112 THFANLKKATGIEYK--DMVFFDDEER-NSHDVSPLGVTCIH 150 (171)
Q Consensus 112 ~~~~~~~~~~~~~~~--~~l~vgD~~~-di~~a~~~G~~~i~ 150 (171)
+.|..-++.+|++|. ++-||.|... --..|+-+||.+++
T Consensus 93 elYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWl 134 (283)
T PRK09348 93 ELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVWL 134 (283)
T ss_pred HHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEEEE
Confidence 789999999999876 6999999998 57888989987654
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=81.90 E-value=11 Score=27.28 Aligned_cols=87 Identities=11% Similarity=0.147 Sum_probs=45.8
Q ss_pred CHHHHHHHHhhC--CcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-
Q psy4436 60 DVPAILKYLKQN--NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER- 136 (171)
Q Consensus 60 ~v~~~l~~L~~~--g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~- 136 (171)
-+..+++.|+++ |.++.+.|.+.. . .....+.+. .... ....|-.-+...+++++.+ +|+-+++++...|
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~t-g-~~~~~~~~~--~~v~-~~~~P~D~~~~~~rfl~~~--~P~~~i~~EtElWP 108 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPT-G-REMARKLLP--DRVD-VQYLPLDFPWAVRRFLDHW--RPDLLIWVETELWP 108 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CC-H-HHHHHGG-G--GG-S-EEE---SSHHHHHHHHHHH----SEEEEES----H
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCc-h-HHHHHHhCC--CCeE-EEEeCccCHHHHHHHHHHh--CCCEEEEEccccCH
Confidence 367789999987 888888888644 2 221222221 1111 2235655677788888876 5899999999999
Q ss_pred c-ccccccCCceEEEeCC
Q psy4436 137 N-SHDVSPLGVTCIHVKD 153 (171)
Q Consensus 137 d-i~~a~~~G~~~i~v~~ 153 (171)
+ +..+++.|+..+.++.
T Consensus 109 nll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp HHHHH-----S-EEEEEE
T ss_pred HHHHHHhhcCCCEEEEee
Confidence 4 8888999999999964
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
Probab=81.68 E-value=1.9 Score=30.77 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=50.6
Q ss_pred eeCCCHHHH---HHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 56 KYYRDVPAI---LKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 56 ~~~~~v~~~---l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
+.-...-++ |..++..+-++++++..+.......+.+.+++. +..++-..++-++..++++.-. .--++||
T Consensus 58 ~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----i~~~~~~~~~e~~~~i~~~~~~-G~~viVG 131 (176)
T PF06506_consen 58 EIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----IKIYPYDSEEEIEAAIKQAKAE-GVDVIVG 131 (176)
T ss_dssp EE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----EEEEEESSHHHHHHHHHHHHHT-T--EEEE
T ss_pred EECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----eEEEEECCHHHHHHHHHHHHHc-CCcEEEC
Confidence 344444444 455555678999998654433344455556654 2222222343455555544222 2347899
Q ss_pred CCcccccccccCCceEEEeCCCC
Q psy4436 133 DEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 133 D~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+..- +..|++.|++++.+..|.
T Consensus 132 g~~~-~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 132 GGVV-CRLARKLGLPGVLIESGE 153 (176)
T ss_dssp SHHH-HHHHHHTTSEEEESS--H
T ss_pred CHHH-HHHHHHcCCcEEEEEecH
Confidence 9865 788999999999997754
|
Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A. |
| >cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain | Back alignment and domain information |
|---|
Probab=81.52 E-value=3.2 Score=31.55 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCC--cEEEEcCCcc-cccccccCCceEEE
Q psy4436 112 THFANLKKATGIEYK--DMVFFDDEER-NSHDVSPLGVTCIH 150 (171)
Q Consensus 112 ~~~~~~~~~~~~~~~--~~l~vgD~~~-di~~a~~~G~~~i~ 150 (171)
+.|..-++.+|++|. ++-||.|... --..|+-+||.+++
T Consensus 89 elYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVWl 130 (279)
T cd00733 89 ELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVWL 130 (279)
T ss_pred HHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEE
Confidence 889999999999876 6999999998 58888989987654
|
GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs. |
| >PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional | Back alignment and domain information |
|---|
Probab=81.20 E-value=13 Score=31.71 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=53.5
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 60 DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 60 ~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
++..+|+..++.+-++++++..+....++.+.+.+++. +..............-+-+++.|+ -++|||... +.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~~~~-~~ 167 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKANGI----EAVVGAGLI-TD 167 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEEcCchH-HH
Confidence 45666666677778999999765545566566666655 222111111122222222333443 467899776 78
Q ss_pred ccccCCceEEEeCCC
Q psy4436 140 DVSPLGVTCIHVKDG 154 (171)
Q Consensus 140 ~a~~~G~~~i~v~~g 154 (171)
.|.++|+.++.+..+
T Consensus 168 ~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 168 LAEEAGMTGIFIYSA 182 (538)
T ss_pred HHHHhCCceEEecCH
Confidence 999999999999754
|
|
| >PLN02334 ribulose-phosphate 3-epimerase | Back alignment and domain information |
|---|
Probab=80.88 E-value=21 Score=26.61 Aligned_cols=108 Identities=7% Similarity=-0.003 Sum_probs=57.4
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCC--chhHHHHHHHHhcCcccccceeeEec---CC--cHHHHHHHHHHhCCCC-CcEEE
Q psy4436 59 RDVPAILKYLKQNNCLVAAASRT--TEMLRAHQLVDLFNWNQHFDHKEIFP---GQ--KTTHFANLKKATGIEY-KDMVF 130 (171)
Q Consensus 59 ~~v~~~l~~L~~~g~~i~i~S~~--~~~~~~~~~l~~~~l~~~fd~~~~~~---~~--k~~~~~~~~~~~~~~~-~~~l~ 130 (171)
+.....++.+++.|.++++..|. +. +..+..++.-+ .+|+.....+| ++ .+..+.++.+-.+..+ ..+..
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~-~~~~~~~~~~~-~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I~a 179 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPV-EAVEPVVEKGL-VDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDIEV 179 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCH-HHHHHHHhccC-CCEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcEEE
Confidence 34568889999999999999974 23 43433332211 33443222222 22 2333434332222212 23445
Q ss_pred E-cCCcccccccccCCceEEEeCCCC-cHHHHHHHHHHhh
Q psy4436 131 F-DDEERNSHDVSPLGVTCIHVKDGM-SHSVLHKGLKQWA 168 (171)
Q Consensus 131 v-gD~~~di~~a~~~G~~~i~v~~g~-~~~~~~~~~~~~~ 168 (171)
+ |=+..++....++|+..+.+..+. ..+...+.+++|.
T Consensus 180 ~GGI~~e~i~~l~~aGad~vvvgsai~~~~d~~~~~~~l~ 219 (229)
T PLN02334 180 DGGVGPSTIDKAAEAGANVIVAGSAVFGAPDYAEVISGLR 219 (229)
T ss_pred eCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 5 344558999999999988886532 2233444444443
|
|
| >TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit | Back alignment and domain information |
|---|
Probab=80.46 E-value=3.7 Score=31.46 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCC--cEEEEcCCcc-cccccccCCceEEE
Q psy4436 112 THFANLKKATGIEYK--DMVFFDDEER-NSHDVSPLGVTCIH 150 (171)
Q Consensus 112 ~~~~~~~~~~~~~~~--~~l~vgD~~~-di~~a~~~G~~~i~ 150 (171)
+.|..-++.+|++|. ++-||.|... --..|+-+||.+++
T Consensus 90 elYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWl 131 (293)
T TIGR00388 90 ELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVWL 131 (293)
T ss_pred HHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEE
Confidence 789999999999876 6999999998 57888989987654
|
This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 171 | ||||
| 2wm8_A | 187 | Crystal Structure Of Human Magnesium-Dependent Phos | 6e-41 | ||
| 1u7o_A | 164 | Magnesium Dependent Phosphatase 1 (Mdp-1) Length = | 7e-40 |
| >pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) Length = 187 | Back alignment and structure |
|
| >pdb|1U7O|A Chain A, Magnesium Dependent Phosphatase 1 (Mdp-1) Length = 164 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 3e-51
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 10 PSVKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYL 68
S+ + PKLAVFDLD+TLWPF V V PPF K D V D G ++ Y +VP +LK L
Sbjct: 21 QSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL 80
Query: 69 KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDM 128
+ AAASRT+E+ A+QL++LF+ ++F H+EI+PG K THF L++ TGI + M
Sbjct: 81 QSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQM 140
Query: 129 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170
+FFDDE RN DVS LGVTCIH+++GM+ L +GL+ +A
Sbjct: 141 IFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAKA 182
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 1e-04
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 31/145 (21%)
Query: 8 LDPSVKK--FPKLAVFDLD--------HTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKY 57
L+P+ + F +L+VF +W + DV+ K+ L
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 58 YRDVPAI-LKYLKQNNCLVAAASRTTEMLRAHQ-LVDLFNWNQHFDHKEIFPGQKTTHFA 115
+P+I L+ + H+ +VD +N + FD ++ P +F
Sbjct: 426 IS-IPSIYLELKVKLE----------NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 116 N-----LKKATGIEYKDM---VFFD 132
+ LK E + VF D
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLD 499
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 171 | |||
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.92 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.92 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.92 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.91 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.91 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.9 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.9 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.9 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.9 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.9 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.89 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.89 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.89 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.89 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.88 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.88 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.88 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.88 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.88 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.88 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.88 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.88 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.88 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.87 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.87 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.87 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.87 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.87 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.87 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.87 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.87 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.86 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.86 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.86 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.86 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.86 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.86 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.86 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.86 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.86 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.86 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.85 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.85 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.85 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.85 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.85 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.85 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.85 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.84 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.84 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.84 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.84 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.84 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.84 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.84 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.84 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.84 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.84 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.83 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.83 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.83 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.83 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.83 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.83 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.83 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.82 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.82 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.82 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.81 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.81 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.81 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.81 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.81 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.8 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.8 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.8 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.8 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.79 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.78 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.78 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.78 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.77 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.77 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.76 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.76 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.75 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.75 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.74 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.74 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.73 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.72 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.72 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.71 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.7 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.7 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.69 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.68 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.68 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.65 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.65 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.64 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.64 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.6 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.6 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.59 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.59 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.57 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.56 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.55 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.53 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.53 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.52 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.27 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.51 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.49 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.46 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.44 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.44 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.44 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.44 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.4 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.38 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.36 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.32 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.26 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.26 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.21 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.21 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.2 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.17 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 99.15 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 99.0 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.94 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.89 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.88 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.88 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.76 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.76 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 98.64 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.57 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.49 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.39 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.39 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.33 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.32 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.27 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.21 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 98.07 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.04 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.89 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.61 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.51 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.28 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 97.11 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.08 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.63 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 95.75 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.37 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 92.99 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 92.63 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 91.47 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 90.74 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 88.89 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 86.56 | |
| 2kln_A | 130 | Probable sulphate-transport transmembrane protein; | 83.93 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 81.48 | |
| 3grc_A | 140 | Sensor protein, kinase; protein structure initiati | 81.41 | |
| 4dgh_A | 130 | Sulfate permease family protein; STAS domain, anio | 80.56 |
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=191.58 Aligned_cols=159 Identities=49% Similarity=0.816 Sum_probs=140.4
Q ss_pred cccCCcEEEEeCCCCCCCceeccccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc-hhHHHHH
Q psy4436 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT-EMLRAHQ 89 (171)
Q Consensus 12 ~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~-~~~~~~~ 89 (171)
|..++|+|+||+|||||+.+.....+.++.... ..+++.......++|++.++|+.|+++|++++++||++ . ..+..
T Consensus 23 m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~-~~~~~ 101 (187)
T 2wm8_A 23 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEI-EGANQ 101 (187)
T ss_dssp HHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCH-HHHHH
T ss_pred HHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCCh-HHHHH
Confidence 555689999999999998877766666665544 55666667788899999999999999999999999997 5 67777
Q ss_pred HHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCcHHHHHHHHHHhhh
Q psy4436 90 LVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 169 (171)
Q Consensus 90 ~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~~~~~~~~~~ 169 (171)
.++.+++..+|+.+...++||+..|..++++++++|++++||||+..|+.+|+++|+.++++.+|+..+++...+++|.+
T Consensus 102 ~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l~~~~~ 181 (187)
T 2wm8_A 102 LLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 181 (187)
T ss_dssp HHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred HHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 99999999999987667789999999999999999999999999999999999999999999999999999999999987
Q ss_pred cC
Q psy4436 170 KN 171 (171)
Q Consensus 170 ~~ 171 (171)
++
T Consensus 182 ~~ 183 (187)
T 2wm8_A 182 AQ 183 (187)
T ss_dssp TC
T ss_pred hc
Confidence 63
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=168.09 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=91.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++++.|+++|++++++||++. ......++.+++..+|+.+. ..+||+|++|+.+++++|++|++|
T Consensus 82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~-~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 160 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKRIKLALATSTPQ-REALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred hcccCccHHHHHHHHHHcCCCcccccCCcH-HHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccce
Confidence 357899999999999999999999999988 77788999999999998762 235899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEE-eCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIH-VKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~-v~~g~~ 156 (171)
+||||+..|+.+|+++|+.+++ +.+|.+
T Consensus 161 l~VgDs~~Di~aA~~aG~~~i~~v~~g~~ 189 (216)
T 3kbb_A 161 VVFEDSKSGVEAAKSAGIERIYGVVHSLN 189 (216)
T ss_dssp EEEECSHHHHHHHHHTTCCCEEEECCSSS
T ss_pred EEEecCHHHHHHHHHcCCcEEEEecCCCC
Confidence 9999999999999999999885 677764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=168.13 Aligned_cols=99 Identities=12% Similarity=0.187 Sum_probs=88.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++++.|+++|++++++||+.. ....++.+++..+|+.+. ..+||+|++|..+++++|++|++|+
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 170 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACI 170 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred ccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEE
Confidence 45799999999999999999999999865 455799999999998872 2358999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCc
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
||||+..|+.+|+++|+.+|+|.+|.+
T Consensus 171 ~VgDs~~di~aA~~aG~~~I~V~~g~~ 197 (243)
T 4g9b_A 171 GIEDAQAGIDAINASGMRSVGIGAGLT 197 (243)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 999999999999999999999988754
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=158.63 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=103.8
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh-----------
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM----------- 84 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~----------- 84 (171)
+|+|+||+||||++.... +........++|++.++|+.|+++|++++|+||++..
T Consensus 1 ~k~v~~D~DGtL~~~~~~--------------~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~ 66 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDA--------------FVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLN 66 (179)
T ss_dssp CCEEEECSBTTTBCCCTT--------------CCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHH
T ss_pred CCEEEEcCCCccccCCCc--------------cCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHH
Confidence 478999999999864310 0012235688999999999999999999999998641
Q ss_pred ---HHHHHHHHhcC--ccccccee------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 85 ---LRAHQLVDLFN--WNQHFDHK------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 85 ---~~~~~~l~~~~--l~~~fd~~------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
......++.++ +..+|... ....||++.+|++++++++++|++++||||+.+|+.+|+++|+.++++.+
T Consensus 67 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 146 (179)
T 3l8h_A 67 AIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT 146 (179)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST
T ss_pred HHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC
Confidence 34566788888 55555321 12458999999999999999999999999999999999999999999999
Q ss_pred CCcHHH
Q psy4436 154 GMSHSV 159 (171)
Q Consensus 154 g~~~~~ 159 (171)
|....+
T Consensus 147 g~~~~~ 152 (179)
T 3l8h_A 147 GNGRKT 152 (179)
T ss_dssp TTHHHH
T ss_pred CCcchh
Confidence 875443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-26 Score=153.88 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=103.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
+|+|+||+||||++ ...++|++.++|+.|+++|++++++||++. ......++.++
T Consensus 2 ~k~i~~D~DgtL~~------------------------~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~-~~~~~~l~~~~ 56 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG------------------------TDEDQRRWRNLLAAAKKNGVGTVILSNDPG-GLGAAPIRELE 56 (137)
T ss_dssp CCEEEECSTTTTSS------------------------CHHHHHHHHHHHHHHHHTTCEEEEEECSCC-GGGGHHHHHHH
T ss_pred CcEEEEeccceecC------------------------CCccCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHCC
Confidence 58999999999954 345689999999999999999999999977 55666888999
Q ss_pred cccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 96 WNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 96 l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
+..+|+.+.. ..||+++.|+.++++++++|++++||||+..|+.+|+++|+.++++.++....
T Consensus 57 l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~~~ 124 (137)
T 2pr7_A 57 TNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAV 124 (137)
T ss_dssp HTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHHHH
T ss_pred hHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHHHH
Confidence 9899987632 35899999999999999999999999999999999999999999998865543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=154.13 Aligned_cols=131 Identities=15% Similarity=0.077 Sum_probs=106.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--hHHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~--~~~~~~~l~~ 93 (171)
+|+|+||+||||++.....+.. ..........++||+.++|+.|+++|++++|+||++. ...+...++.
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~---------~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~ 73 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDH---------HPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN 73 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCS---------SCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred ceEEEEcCCCceeeccchhhhh---------HHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh
Confidence 7899999999998732211100 0111223578999999999999999999999999864 1456779999
Q ss_pred cCcccccceee---------EecCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCC
Q psy4436 94 FNWNQHFDHKE---------IFPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 94 ~~l~~~fd~~~---------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|+..+|+.+. ...||++++|+.++++++++|++++||||+ ..|+.+|+++|+.++++.++.
T Consensus 74 ~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~ 145 (189)
T 3ib6_A 74 FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE 145 (189)
T ss_dssp TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence 99999998772 234899999999999999999999999999 699999999999999997644
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=158.90 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=103.5
Q ss_pred ccccCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch-------
Q psy4436 11 SVKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE------- 83 (171)
Q Consensus 11 ~~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~------- 83 (171)
.|..++|+++||+||||++...+. .......++||+.++|+.|+++|++++|+||++.
T Consensus 20 ~m~~~~k~v~~D~DGTL~~~~~~~---------------~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~ 84 (211)
T 2gmw_A 20 HMAKSVPAIFLDRDGTINVDHGYV---------------HEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFT 84 (211)
T ss_dssp ----CBCEEEECSBTTTBCCCSSC---------------CSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSC
T ss_pred hhhhcCCEEEEcCCCCeECCCCcc---------------cCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccC
Confidence 344457899999999998743211 1123567899999999999999999999999973
Q ss_pred -------hHHHHHHHHhcCcccccceee-----------------EecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 84 -------MLRAHQLVDLFNWNQHFDHKE-----------------IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 84 -------~~~~~~~l~~~~l~~~fd~~~-----------------~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
.......++.+++. |+.+. ...||++.+|+.++++++++|++++||||+.+|+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~ 162 (211)
T 2gmw_A 85 EAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQ 162 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 25667788888886 54331 13588999999999999999999999999999999
Q ss_pred ccccCCceE-EEeCCCCc
Q psy4436 140 DVSPLGVTC-IHVKDGMS 156 (171)
Q Consensus 140 ~a~~~G~~~-i~v~~g~~ 156 (171)
+|+++|+.+ +++.+|..
T Consensus 163 ~a~~aG~~~~i~v~~g~~ 180 (211)
T 2gmw_A 163 AAVAANVGTKVLVRTGKP 180 (211)
T ss_dssp HHHHTTCSEEEEESSSSC
T ss_pred HHHHCCCceEEEEecCCC
Confidence 999999999 99988764
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=161.50 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=86.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++++.|++.|+++++.|++.. +...++.+|+..+|+.+. ..+||+|+.|..+++++|++|++|
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~---~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASKN---AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccccchhHHHHHHHHHhcccccccccccch---hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 446799999999999999999999888754 445899999999998872 235899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+||||+..|+.+|+++|+.++++.+
T Consensus 191 l~VGDs~~Di~aA~~aG~~~i~v~~ 215 (250)
T 4gib_A 191 IGIEDASAGIDAINSANMFSVGVGN 215 (250)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEESC
T ss_pred EEECCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999954
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=157.66 Aligned_cols=100 Identities=9% Similarity=0.132 Sum_probs=91.2
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE---ecCCcHHHHHHHHHHhCCCCCcEEEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---FPGQKTTHFANLKKATGIEYKDMVFF 131 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~~l~v 131 (171)
..++||+.++|+.|++ |++++++||++. ......++.+++..+|+.+.. ..||+|+.|+++++++|++|++|++|
T Consensus 83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSS-SYPLYITTTKDT-STAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp CEECTTHHHHHHHHHT-TSCEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 5789999999999999 999999999977 667778999999999987632 24899999999999999999999999
Q ss_pred cCCcccccccccCCceEEEeCCCCc
Q psy4436 132 DDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 132 gD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
||+.+|+.+|+++|+.++++.+|..
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~ 185 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFG 185 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCC
Confidence 9999999999999999999998765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=153.91 Aligned_cols=102 Identities=17% Similarity=0.098 Sum_probs=91.4
Q ss_pred CCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCC
Q psy4436 52 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 52 ~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~ 126 (171)
.....++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||+++.|+.++++++++|+
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNG-ERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred cccceECcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 35678999999999999999999999999977 777889999999999987632 248889999999999999999
Q ss_pred -cEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 127 -DMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 127 -~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++++|||+.+|+.+|+++|+.++++.++
T Consensus 178 ~~~v~vGD~~~Di~~a~~aG~~~v~~~~~ 206 (231)
T 3kzx_A 178 KEVFFIGDSISDIQSAIEAGCLPIKYGST 206 (231)
T ss_dssp TTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred cCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 9999999999999999999999999654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-24 Score=154.13 Aligned_cols=140 Identities=15% Similarity=0.024 Sum_probs=109.7
Q ss_pred CCcEEEEeCCCCCCCceecc-----ccCCcceec--------C-----------ceeeccCCCeeeeCCCHHHHHHHHhh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYI-----DVIPPFKKI--------G-----------DKVLDAGGAIIKYYRDVPAILKYLKQ 70 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~-----~~~~~~~~~--------~-----------~~~~~~~~~~~~~~~~v~~~l~~L~~ 70 (171)
++|+|+||+||||++..... ..+.+.... . ............++|++.++|+.|++
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 84 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAG 84 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHH
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHh
Confidence 47999999999999753321 111111100 0 00111122456889999999999999
Q ss_pred CCcEEEEEcCCchhHHHHHHHHhcCccccc--ceee----EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC
Q psy4436 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKE----IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 71 ~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f--d~~~----~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~ 144 (171)
+|++++++||++. ......++.+++..+| +.+. ...||++..|+.+++++|++|+++++|||+.+|+.+|+++
T Consensus 85 ~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~a 163 (205)
T 3m9l_A 85 RGYRLGILTRNAR-ELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAA 163 (205)
T ss_dssp TTCEEEEECSSCH-HHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred cCCeEEEEeCCch-HHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHc
Confidence 9999999999987 7778899999999999 5552 2358889999999999999999999999999999999999
Q ss_pred CceEEEeCCCC
Q psy4436 145 GVTCIHVKDGM 155 (171)
Q Consensus 145 G~~~i~v~~g~ 155 (171)
|+.++++.++.
T Consensus 164 G~~~i~v~~~~ 174 (205)
T 3m9l_A 164 GTRTVLVNLPD 174 (205)
T ss_dssp TCEEEECSSSS
T ss_pred CCEEEEEeCCC
Confidence 99999997754
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-24 Score=153.59 Aligned_cols=126 Identities=13% Similarity=-0.003 Sum_probs=96.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
.+|+|+||+||||++....... .... ......++||+.++|+.|+++|++++|+||++. ......+.
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~~--------~~~~--~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~-~~~~~~~~-- 71 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAAT--------SDTP--DDEHAQLTPGAQNALKALRDQGMPCAWIDELPE-ALSTPLAA-- 71 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTTS--------CSSC--CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCH-HHHHHHHT--
T ss_pred cCCEEEEcCCCceEeccccccc--------hhhc--ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChH-HHHHHhcC--
Confidence 4799999999999873221100 0000 112457899999999999999999999999977 44433332
Q ss_pred Ccccccceee-----EecCCcHHHHHHHHHHhCCCC-CcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 95 NWNQHFDHKE-----IFPGQKTTHFANLKKATGIEY-KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 95 ~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~-~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
.+|+.+. ..+||+|++|.++++++++.+ ++|+||||+..|+.+|+++|+.++++.+|..
T Consensus 72 ---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 72 ---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp ---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred ---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 3455441 245899999999999999975 8999999999999999999999999988763
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-24 Score=152.90 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=103.8
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCC------------
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT------------ 81 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~------------ 81 (171)
+.+|+++||+||||+...... ..........++|++.++|+.|+++|++++|+||+
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~~------------~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~ 79 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPSD------------FQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQAD 79 (176)
T ss_dssp -CCEEEEECSBTTTBCCC--C------------CCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHH
T ss_pred CcCcEEEEeCCCCeEcCCCCC------------cCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHh
Confidence 358999999999998753211 01112345788999999999999999999999998
Q ss_pred ---chhHHHHHHHHhcCcccccceeeE----------ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceE
Q psy4436 82 ---TEMLRAHQLVDLFNWNQHFDHKEI----------FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 148 (171)
Q Consensus 82 ---~~~~~~~~~l~~~~l~~~fd~~~~----------~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~ 148 (171)
.. ..+...++.+++. |+.+.. ..||++++|+.++++++++|++++||||+..|+.+|+++|+.+
T Consensus 80 ~~~~~-~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 80 FDGPH-NLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp HHHHH-HHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred hhhhH-HHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 34 6677789999987 665421 3488999999999999999999999999999999999999999
Q ss_pred EEeCCCC-cHHHHHHH
Q psy4436 149 IHVKDGM-SHSVLHKG 163 (171)
Q Consensus 149 i~v~~g~-~~~~~~~~ 163 (171)
+++.++. .++++...
T Consensus 157 i~v~~~~~~~~~~~~~ 172 (176)
T 2fpr_A 157 LRYDRETLNWPMIGEQ 172 (176)
T ss_dssp EECBTTTBCHHHHHHH
T ss_pred EEEcCCcccHHHHHHH
Confidence 9997764 46655443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=154.10 Aligned_cols=101 Identities=18% Similarity=0.236 Sum_probs=92.8
Q ss_pred CeeeeCCCHHHHHHHHhhCC-cEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEE
Q psy4436 53 AIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 131 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~v 131 (171)
....++|++.++++.|+++| ++++++||.+. ......++.+++..+|+.+...++||+..|+.+++++|++|+++++|
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~i 180 (234)
T 3ddh_A 102 MPIELLPGVKETLKTLKETGKYKLVVATKGDL-LDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLMV 180 (234)
T ss_dssp CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCH-HHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCCcCccHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEEE
Confidence 45678999999999999999 99999999877 66777999999999999887788999999999999999999999999
Q ss_pred cCCc-ccccccccCCceEEEeCCC
Q psy4436 132 DDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 132 gD~~-~di~~a~~~G~~~i~v~~g 154 (171)
||+. +|+.+|+++|+.++++..|
T Consensus 181 GD~~~~Di~~a~~aG~~~v~v~~~ 204 (234)
T 3ddh_A 181 GNSFKSDIQPVLSLGGYGVHIPFE 204 (234)
T ss_dssp ESCCCCCCHHHHHHTCEEEECCCC
T ss_pred CCCcHHHhHHHHHCCCeEEEecCC
Confidence 9997 9999999999999999544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=153.90 Aligned_cols=102 Identities=19% Similarity=0.140 Sum_probs=92.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+++|++++++||+.. ......++.+++..+|+.+.. ..||++..|+.+++++|++|+++
T Consensus 102 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 180 (237)
T 4ex6_A 102 PRLLYPGVLEGLDRLSAAGFRLAMATSKVE-KAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERC 180 (237)
T ss_dssp GGGBCTTHHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCccCCCHHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 456899999999999999999999999987 777889999999999987622 24888999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+.+|+.+|+++|+.++++.+|..
T Consensus 181 i~vGD~~~Di~~a~~aG~~~i~v~~g~~ 208 (237)
T 4ex6_A 181 VVIGDGVPDAEMGRAAGMTVIGVSYGVS 208 (237)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEESSSSS
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEecCCC
Confidence 9999999999999999999999988754
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=153.03 Aligned_cols=100 Identities=12% Similarity=0.162 Sum_probs=90.3
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+.+++++|++|++++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGND-EMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 46789999999999999999999999987 777779999999999987632 348999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCCC
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|||+.+|+.+|+++|+.++++.++.
T Consensus 183 ~iGD~~~Di~~a~~aG~~~~~v~~~~ 208 (240)
T 2no4_A 183 FVSSNAWDLGGAGKFGFNTVRINRQG 208 (240)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred EEeCCHHHHHHHHHCCCEEEEECCCC
Confidence 99999999999999999999997653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=151.50 Aligned_cols=102 Identities=14% Similarity=0.164 Sum_probs=91.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 171 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSR-HSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESE 171 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence 4567899999999999999999999999987 777779999999999987632 2489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+++|||+.+|+.+|+++|+.++++.++.
T Consensus 172 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 199 (230)
T 3um9_A 172 ILFVSCNSWDATGAKYFGYPVCWINRSN 199 (230)
T ss_dssp EEEEESCHHHHHHHHHHTCCEEEECTTS
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEEeCCC
Confidence 9999999999999999999999987653
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-23 Score=152.05 Aligned_cols=102 Identities=19% Similarity=0.195 Sum_probs=92.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+++|++++++||+.. ......++.+++..+|+.+.. ..||++..|+.+++++|++|+++
T Consensus 84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 84 ENKVYDGIEALLSSLKDYGFHLVVATSKPT-VFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp SCCBCTTHHHHHHHHHHHTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 357899999999999999999999999977 777889999999999987732 24899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+.+|+.+|+++|+.++++.+|..
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~ 190 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFG 190 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSS
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCC
Confidence 9999999999999999999999988764
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-23 Score=153.96 Aligned_cols=100 Identities=13% Similarity=0.144 Sum_probs=90.7
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|+++
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNP-QMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCH-HHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 467899999999999999999999999987 777779999999999987632 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++|||+.+|+.+|+++|+.++++.++
T Consensus 176 ~~vGD~~~Di~~a~~~G~~~~~v~~~ 201 (233)
T 3umb_A 176 LFVSSNGWDACGATWHGFTTFWINRL 201 (233)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTT
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999999998654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-23 Score=152.73 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=92.1
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. .+||++..|+.++++++++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 158 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLE-ELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence 4578999999999999999999999999977 777789999999999987632 3589999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+++|||+.+|+.+|+++|+.++++.+|.
T Consensus 159 ~~~vGD~~~Di~~a~~aG~~~i~v~~g~ 186 (222)
T 2nyv_A 159 ALIVGDTDADIEAGKRAGTKTALALWGY 186 (222)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEETTSS
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCC
Confidence 9999999999999999999999998764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-23 Score=152.62 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=91.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++.|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|+++
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 167 (233)
T 3s6j_A 89 QIIALPGAVELLETLDKENLKWCIATSGGI-DTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDEC 167 (233)
T ss_dssp GCEECTTHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCch-hhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHE
Confidence 468899999999999999999999999977 777889999999999987622 35889999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++|||+.+|+.+|+++|+.++++.+|.
T Consensus 168 i~iGD~~~Di~~a~~aG~~~i~v~~g~ 194 (233)
T 3s6j_A 168 LVIGDAIWDMLAARRCKATGVGLLSGG 194 (233)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEEGGGS
T ss_pred EEEeCCHHhHHHHHHCCCEEEEEeCCC
Confidence 999999999999999999999998763
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=150.74 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=93.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCC-CCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIE-YKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~-~~~ 127 (171)
...++|++.++|+.|++.|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++ |++
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 108 ENKIYENMKEILEMLYKNGKILLVATSKPT-VFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred ccccCccHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 467999999999999999999999999877 777889999999999987632 2489999999999999999 999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCcH
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
+++|||+.+|+.+|+++|+.++++.+|...
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~ 216 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGS 216 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCC
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCC
Confidence 999999999999999999999999887643
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-23 Score=147.48 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=90.3
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|++++
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVK-ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcH-HHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence 46899999999999999999999999987 778889999999999987622 348889999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCC
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+|||+.+|+.+|+++|+.++++.++
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~~ 191 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRDN 191 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECCS
T ss_pred EEeccHhhHHHHHHCCCEEEEECCC
Confidence 9999999999999999999999765
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-23 Score=152.13 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=91.5
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++++||++. ......++.+++. +|+.+.. .+||+|..|..+++++|++|++
T Consensus 107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~ 184 (240)
T 2hi0_A 107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPN-EAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDK 184 (240)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGG
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 3567899999999999999999999999877 6677789999988 8987632 3489999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 185 ~~~vGDs~~Di~~a~~aG~~~v~v~~~~~ 213 (240)
T 2hi0_A 185 CVYIGDSEIDIQTARNSEMDEIAVNWGFR 213 (240)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEESSSSS
T ss_pred eEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 99999999999999999999999988763
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-23 Score=151.66 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=90.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|+++
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999999999999999999999987 677779999999999987632 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++|||+.+|+.+|+++|+.++++.++
T Consensus 172 ~~iGD~~~Di~~a~~aG~~~~~~~~~ 197 (232)
T 1zrn_A 172 LFVASNAWDATGARYFGFPTCWINRT 197 (232)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTT
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999999998765
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=142.01 Aligned_cols=119 Identities=14% Similarity=0.138 Sum_probs=96.6
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||+++...... .......+.|+..++|+.|+++|++++++||++. ..+...++.+
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTE-------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGRDS-APLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEET-------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCC-HHHHHHHHHT
T ss_pred ceeEEEEecCcceECCceeecC-------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHc
Confidence 4799999999999975432110 0011234467789999999999999999999988 7778899999
Q ss_pred CcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 95 NWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 95 ~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
++..+|+. .+|++..|++++++++++|++++||||+.+|+.+|+++|+.++..
T Consensus 74 gl~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 74 GVEEIYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp TCCEEEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred CCHhhccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 99877754 588999999999999999999999999999999999999986643
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=149.39 Aligned_cols=101 Identities=12% Similarity=0.134 Sum_probs=89.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc--ceee-----EecCCcHHHHHHHHHHhCCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKE-----IFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f--d~~~-----~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
...++|++.++|+.|+++|++++++||++. ......++. ++..+| +.+. ...||++..|+.++++++++|+
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQ-LSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD 184 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCC-HHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence 467899999999999999999999999987 556667888 999999 6652 2348899999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++++|||+.+|+.+|+++|+.++++.++..
T Consensus 185 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~ 214 (243)
T 3qxg_A 185 EAVVIENAPLGVEAGHKAGIFTIAVNTGPL 214 (243)
T ss_dssp GEEEEECSHHHHHHHHHTTCEEEEECCSSS
T ss_pred HeEEEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence 999999999999999999999999988754
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=149.26 Aligned_cols=101 Identities=11% Similarity=0.047 Sum_probs=90.5
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+ +|++++++||++. ......++.+++..+|+.+.. ..||++..|+.+++++|++|++
T Consensus 104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 181 (240)
T 3qnm_A 104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFR-ELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE 181 (240)
T ss_dssp GCCCBSTTHHHHHHHHT-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hcCCcCccHHHHHHHHH-cCCeEEEEeCCch-HHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCccc
Confidence 34678999999999999 9999999999977 677779999999999987632 3489999999999999999999
Q ss_pred EEEEcCCc-ccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEE-RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~-~di~~a~~~G~~~i~v~~g~ 155 (171)
+++|||+. +|+.+|+++|+.++++.++.
T Consensus 182 ~~~iGD~~~~Di~~a~~aG~~~~~~~~~~ 210 (240)
T 3qnm_A 182 SLMIGDSWEADITGAHGVGMHQAFYNVTE 210 (240)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred EEEECCCchHhHHHHHHcCCeEEEEcCCC
Confidence 99999996 99999999999999997765
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=151.98 Aligned_cols=101 Identities=6% Similarity=-0.124 Sum_probs=90.3
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc-cceeeE-----ecCCcHHHHHHHHHHhCCCC-Cc
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-FDHKEI-----FPGQKTTHFANLKKATGIEY-KD 127 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~-fd~~~~-----~~~~k~~~~~~~~~~~~~~~-~~ 127 (171)
..++|++.++|+.|++.|++++++||.+. ......++.+++..+ |+.+.. ..||++..|+.+++++|++| ++
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 188 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGP-GMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNG 188 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCch-HHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence 57899999999999999999999999987 777778999888887 776522 24889999999999999999 99
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++|||+.+|+.+|+++|+.+++|.+|..
T Consensus 189 ~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 189 CIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 99999999999999999999999998853
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=148.36 Aligned_cols=102 Identities=10% Similarity=0.133 Sum_probs=91.8
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
....++|++.++|+.|+ +|++++++||++. ......++.+++..+|+.+....||++..|+.++++++++|+++++||
T Consensus 109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iG 186 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDL-FHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIG 186 (251)
T ss_dssp CCCCBCTTHHHHHHHHH-TTSEEEEEEESCH-HHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ccCCcCccHHHHHHHHH-CCCEEEEEeCCCH-HHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEEC
Confidence 34678999999999999 9999999999977 667778999999999998866779999999999999999999999999
Q ss_pred CCc-ccccccccCCceEEEeCCCCc
Q psy4436 133 DEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 133 D~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
|+. +|+.+|+++|+.++++.+|..
T Consensus 187 D~~~~Di~~a~~aG~~~~~v~~~~~ 211 (251)
T 2pke_A 187 NSLRSDVEPVLAIGGWGIYTPYAVT 211 (251)
T ss_dssp SCCCCCCHHHHHTTCEEEECCCC--
T ss_pred CCchhhHHHHHHCCCEEEEECCCCc
Confidence 999 999999999999999977653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-23 Score=148.35 Aligned_cols=102 Identities=11% Similarity=0.067 Sum_probs=91.2
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++|++.++|+.|+++| +++++||++. ......++.+++..+|+.+.. ..||+++.|+.++++++++|++++
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGR-DLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCH-HHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcH-HHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 458999999999999999 9999999987 777778999999999987622 358999999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
||||+.+|+.+|+++|+.++++.++....
T Consensus 163 ~vgD~~~Di~~a~~aG~~~~~~~~~~~~~ 191 (200)
T 3cnh_A 163 MVDDRLQNVQAARAVGMHAVQCVDAAQLR 191 (200)
T ss_dssp EEESCHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred EeCCCHHHHHHHHHCCCEEEEECCchhhH
Confidence 99999999999999999999998876533
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-22 Score=147.64 Aligned_cols=101 Identities=10% Similarity=0.108 Sum_probs=87.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc--ceee-----EecCCcHHHHHHHHHHhCCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF--DHKE-----IFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f--d~~~-----~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
...++|++.++|+.|+++|++++++||++. ......++. ++..+| +.+. ...||++..|+.+++++|++|+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQ-TSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCch-HHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 467899999999999999999999999977 556667888 999999 6652 2348899999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++++|||+.+|+.+|+++|+.++++.+|..
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~ 213 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVNTGPL 213 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEECCSSS
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 999999999999999999999999988653
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-23 Score=148.45 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=86.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---------------EecCCcHHHHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---------------IFPGQKTTHFANLK 118 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---------------~~~~~k~~~~~~~~ 118 (171)
...++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+. ...+||+..|+.++
T Consensus 73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 73 SLPLFEGALELVSALKEKNYKVVCFSGGFD-LATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp TCCBCBTHHHHHHHHHTTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred cCcCCCCHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 367899999999999999999999999977 77788999999998887652 12488999999999
Q ss_pred HHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 119 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 119 ~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
++++++|++++||||+.+|+.+|+++|+.++.
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 99999999999999999999999999998765
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=147.64 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=91.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh------cCcccccceeeE-----ecCCcHHHHHHHHHHhC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL------FNWNQHFDHKEI-----FPGQKTTHFANLKKATG 122 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~------~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~ 122 (171)
...++|++.++|+.|++ |++++++||++. ......++. +++..+|+.+.. ..||+++.|+.++++++
T Consensus 87 ~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRP-DYRLFLLSNTNP-YVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EEEECHHHHHHHHHHTT-TSEEEEEECCCH-HHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred hcccChHHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhC
Confidence 35789999999999999 999999999977 667778887 799999987632 35899999999999999
Q ss_pred CCCCcEEEEcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 123 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 123 ~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
++|++++||||+.+|+.+|+++|+.++++.++...+
T Consensus 165 ~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~ 200 (211)
T 2i6x_A 165 MKPEETLFIDDGPANVATAERLGFHTYCPDNGENWI 200 (211)
T ss_dssp CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCH
T ss_pred CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 999999999999999999999999999998876544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=146.56 Aligned_cols=100 Identities=21% Similarity=0.287 Sum_probs=90.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++. ++++++||++. ......++.+++..+|+.+.. ..||++..|+.+++++|++|+++
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDT-EQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCH-HHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 457899999999999999 99999999987 777779999999999987632 35899999999999999999999
Q ss_pred EEEcCCc-ccccccccCCceEEEeCCCC
Q psy4436 129 VFFDDEE-RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 129 l~vgD~~-~di~~a~~~G~~~i~v~~g~ 155 (171)
++|||+. +|+.+|+++|+.++++.+|.
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~ 203 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKNLGMTSILLDRKG 203 (234)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECSSS
T ss_pred EEEcCCcHHHHHHHHHcCCEEEEECCCC
Confidence 9999997 99999999999999997653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=145.96 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=89.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhC-CCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATG-IEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~-~~~~~ 127 (171)
...++|++.++|+.|++. ++++++||++. ......++.+++..+|+.+.. ..||++..|+++++++| ++|++
T Consensus 101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVS-HTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp CCCBCTTHHHHHHHHHTT-SEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence 467899999999999999 99999999977 777779999999999987632 34899999999999999 99999
Q ss_pred EEEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 128 MVFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 128 ~l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
+++|||+. +|+.+|+++|+.++++.++
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~ 206 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPD 206 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence 99999998 9999999999999999775
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-22 Score=149.95 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=91.0
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++|++.++|+.|+++|++++++||++. ......++.+++..+|+.+.. ..||++..|+++++++|++|++++
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i 171 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNP-VKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL 171 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCc-hhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 45799999999999999999999999977 677789999999999987632 348999999999999999999999
Q ss_pred EEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 130 FFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 130 ~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|||+. +|+.+|+++|+.++++.+|..
T Consensus 172 ~iGD~~~~Di~~a~~aG~~~~~v~~g~~ 199 (241)
T 2hoq_A 172 MVGDRLYSDIYGAKRVGMKTVWFRYGKH 199 (241)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred EECCCchHhHHHHHHCCCEEEEECCCCC
Confidence 999998 899999999999999987764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-22 Score=146.27 Aligned_cols=127 Identities=10% Similarity=0.019 Sum_probs=101.2
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh---------
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--------- 84 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--------- 84 (171)
.++|+++||+||||++...+. .......++|++.++|+.|+++|++++++||++..
T Consensus 29 ~~~k~i~~D~DGtl~~~~~y~---------------~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~ 93 (218)
T 2o2x_A 29 PHLPALFLDRDGTINVDTDYP---------------SDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSA 93 (218)
T ss_dssp SSCCCEEECSBTTTBCCCSCT---------------TCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHH
T ss_pred hcCCEEEEeCCCCcCCCCccc---------------CCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHH
Confidence 357899999999998743221 11234678999999999999999999999998652
Q ss_pred -----HHHHHHHHhcCcc--ccccee-------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC
Q psy4436 85 -----LRAHQLVDLFNWN--QHFDHK-------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 144 (171)
Q Consensus 85 -----~~~~~~l~~~~l~--~~fd~~-------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~ 144 (171)
......++.+++. .+|... ....||++.+|+.++++++++|++++||||+..|+.+|+++
T Consensus 94 ~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~a 173 (218)
T 2o2x_A 94 FAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRA 173 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHC
Confidence 3556688888864 222111 12348899999999999999999999999999999999999
Q ss_pred CceE-EEeCCCC
Q psy4436 145 GVTC-IHVKDGM 155 (171)
Q Consensus 145 G~~~-i~v~~g~ 155 (171)
|+.+ +++.+|.
T Consensus 174 G~~~~i~v~~g~ 185 (218)
T 2o2x_A 174 GLAQGWLVDGEA 185 (218)
T ss_dssp TCSEEEEETCCC
T ss_pred CCCEeEEEecCC
Confidence 9999 9998765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=136.84 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=94.0
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCee-eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAII-KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
++|+|+||+||||++....... ..... .....-..+|+.|+++|++++++||++. ..+...++.
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~ 67 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQ--------------TGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKT-EIVRRRAEK 67 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECS--------------SSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSCC-HHHHHHHHH
T ss_pred cceEEEEcCCCceEcCcEEEcC--------------CCcEEEEecCChHHHHHHHHHCCCEEEEEeCCCh-HHHHHHHHH
Confidence 4899999999999986543211 01111 1111112379999999999999999987 778889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
+++..+|+.. +||++.++.++++++++|++++||||+.+|+.+++++|+.++.
T Consensus 68 ~gl~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 120 (164)
T 3e8m_A 68 LKVDYLFQGV----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP 120 (164)
T ss_dssp TTCSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred cCCCEeeccc----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence 9998877654 8999999999999999999999999999999999999997665
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-23 Score=153.22 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=91.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccce-ee-----E-ecCCcHHHHHHHHHHhCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KE-----I-FPGQKTTHFANLKKATGIEY 125 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~-~~-----~-~~~~k~~~~~~~~~~~~~~~ 125 (171)
....++|++.++|+.|++.|++++++||.+. ......++.+++..+|+. +. . ..||++..|+.++++++++|
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSER-GRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP 185 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCH-HHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence 4568899999999999999999999999987 777889999999988987 51 2 46888999999999999999
Q ss_pred CcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++++||||+.+|+.+|+++|+.++++.+|
T Consensus 186 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g 214 (259)
T 4eek_A 186 ERCVVIEDSVTGGAAGLAAGATLWGLLVP 214 (259)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred HHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence 99999999999999999999999999776
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-23 Score=150.58 Aligned_cols=104 Identities=25% Similarity=0.322 Sum_probs=88.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh-cCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~-~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
..++|++.++|+.|+++|++++++||++. ......++. +++..+|+.+.. ..||+++.|+.++++++++|+++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 168 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 168 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCCh-HHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 67899999999999999999999999876 444444555 677778877622 35899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCcHHH
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 159 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~ 159 (171)
+||||+.+|+.+|+++|+.++++.++...++
T Consensus 169 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 169 VFFDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred EEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 9999999999999999999999988776543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-22 Score=147.95 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=92.1
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++|++++++||++. ..+...++.+++..+|+.+.. ..||++..|+.++++++++|++
T Consensus 111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 189 (243)
T 2hsz_A 111 NISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ 189 (243)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCEEEEEECCcH-HHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhh
Confidence 3467899999999999999999999999987 777889999999999987622 2488889999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++|||+.+|+.+|+++|+.++++.+|..
T Consensus 190 ~~~vGD~~~Di~~a~~aG~~~i~v~~g~~ 218 (243)
T 2hsz_A 190 ILFVGDSQNDIFAAHSAGCAVVGLTYGYN 218 (243)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 99999999999999999999999988653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-22 Score=148.21 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=87.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+ |++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|+++
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCcCH-HHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 3578999999999999 999999999987 777779999999999987632 35899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
++|||+.+|+.+|+++|+.++++.+
T Consensus 168 ~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 168 LFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECC
T ss_pred EEEeCChhhHHHHHHCCCEEEEECC
Confidence 9999999999999999999999976
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.9e-23 Score=152.04 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=87.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh-cCccccccee---e--E--ecCCcHHHHHHHHHHhCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHK---E--I--FPGQKTTHFANLKKATGIEY 125 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~-~~l~~~fd~~---~--~--~~~~k~~~~~~~~~~~~~~~ 125 (171)
...++|++.++|+.|+++|++++++||++. ......+.. .++..+|+.+ + . ..||+++.|+.++++++++|
T Consensus 110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~-~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 110 TAALMPGAEKLIIHLRKHGIPFALATSSRS-ASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp GCCBCTTHHHHHHHHHHTTCCEEEECSCCH-HHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 467899999999999999999999999976 444545544 5788888765 2 2 34889999999999999998
Q ss_pred --CcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 126 --KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 126 --~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++++|||+.+|+.+|+++|+.++++.+|..
T Consensus 189 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNL 221 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTS
T ss_pred CcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence 9999999999999999999999999988764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-22 Score=144.56 Aligned_cols=94 Identities=11% Similarity=0.158 Sum_probs=84.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++. ++++++||++. . ++.+++..+|+.+.. ..||++..|+.+++++|++|+++
T Consensus 103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (230)
T 3vay_A 103 QVQIFPEVQPTLEILAKT-FTLGVITNGNA-D-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAA 175 (230)
T ss_dssp CCCBCTTHHHHHHHHHTT-SEEEEEESSCC-C-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCccCcCHHHHHHHHHhC-CeEEEEECCch-h-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchhe
Confidence 456899999999999998 99999999876 2 788999999987732 34899999999999999999999
Q ss_pred EEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
++|||+. +|+.+|+++|+.++++.++
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~ 202 (230)
T 3vay_A 176 VHVGDHPSDDIAGAQQAGMRAIWYNPQ 202 (230)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred EEEeCChHHHHHHHHHCCCEEEEEcCC
Confidence 9999998 8999999999999999764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-22 Score=150.20 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=87.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|+.|++ +++++|+||++. ......++.+++..+|+.+.. .+||+|+.|+.++++++++|++++
T Consensus 120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 120 MILADDVKAMLTELRK-EVRLLLLTNGDR-QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCcCHHHHHHHHHc-CCcEEEEECcCh-HHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 5789999999999998 599999999987 677779999999999987622 348999999999999999999999
Q ss_pred EEcCC-cccccccccCCc-eEEEeCCC
Q psy4436 130 FFDDE-ERNSHDVSPLGV-TCIHVKDG 154 (171)
Q Consensus 130 ~vgD~-~~di~~a~~~G~-~~i~v~~g 154 (171)
||||+ .+|+.+|+++|+ .++++.++
T Consensus 198 ~vGDs~~~Di~~A~~aG~~~~i~v~~~ 224 (260)
T 2gfh_A 198 MVGDTLETDIQGGLNAGLKATVWINKS 224 (260)
T ss_dssp EEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred EECCCchhhHHHHHHCCCceEEEEcCC
Confidence 99995 899999999999 89998653
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-22 Score=151.78 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=80.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc--C---------ccc----ccceeeEecCCcHHHHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF--N---------WNQ----HFDHKEIFPGQKTTHFANLK 118 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~--~---------l~~----~fd~~~~~~~~k~~~~~~~~ 118 (171)
...++||+.++|+. |++++|+||++. ..++..++.. + +.. +|+.....+||.|+.|..++
T Consensus 123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~-~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 123 KAPVYADAIDFIKR----KKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp CBCCCHHHHHHHHH----CSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHH
T ss_pred cCCCCCCHHHHHHc----CCEEEEEeCCCH-HHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHH
Confidence 35778999999888 899999999988 6777788876 4 444 44432213599999999999
Q ss_pred HHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 119 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 119 ~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+++|++|++|+||||+..|+.+|+++|+.++++.+
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 99999999999999999999999999999999966
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-22 Score=148.44 Aligned_cols=101 Identities=21% Similarity=0.296 Sum_probs=87.6
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHH---H---HhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCC
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL---V---DLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~---l---~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~ 124 (171)
.++|++.++|+.|++. ++++++||++. ...... + +.+++..+|+.+.. ..||+|+.|+.+++++|++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~-~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTND-IHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCH-HHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCCh-HHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 99999999987 555533 3 77888889987622 3589999999999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
|++++||||+.+|+.+|+++|+.++++.++...+
T Consensus 190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 190 PKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 9999999999999999999999999998876544
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=137.52 Aligned_cols=118 Identities=17% Similarity=0.139 Sum_probs=97.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCC-eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGA-IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
++|+|+||+||||++....... .+. ...+.+...++|+.|+++|++++++||++. ..+...++.
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~-~~~~~~~~~ 71 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDA--------------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDS-PILRRRIAD 71 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEET--------------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCC-HHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCeeecc--------------CcceeeeeccchHHHHHHHHHCCCeEEEEeCCCc-HHHHHHHHH
Confidence 4799999999999985433110 011 113456778999999999999999999988 777889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+++..+|+. .+||+..+++++++++++|++++||||+.+|+.+++++|+.++..
T Consensus 72 lgl~~~~~~----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 72 LGIKLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp HTCCEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred cCCceeecC----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 999877743 488999999999999999999999999999999999999986643
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-22 Score=146.05 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=81.1
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---E--ecCCcHHHHHHHHHHhCCCCCcEEE
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---I--FPGQKTTHFANLKKATGIEYKDMVF 130 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---~--~~~~k~~~~~~~~~~~~~~~~~~l~ 130 (171)
.++|++.++|+.|+++|++++++||+.. ....++.+++..+|+.+. . ..||++..|+.+++++|++|+++++
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 3799999999999999999999999854 566899999999998762 1 3478888899999999999999999
Q ss_pred EcCCcccccccccCCceEEEeCC
Q psy4436 131 FDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 131 vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
|||+.+|+.+|+++|+.++++.+
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~ 191 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAVGVGQ 191 (233)
T ss_dssp EECSHHHHHHHHHTTCEEEECC-
T ss_pred EeCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999964
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=148.44 Aligned_cols=101 Identities=22% Similarity=0.293 Sum_probs=90.1
Q ss_pred eeeeCCCHHHHHHHHhhCCc--EEEEEcCCchhHHHHHHHHhcCcccccceee---------EecCCcHHHHHHHHHHhC
Q psy4436 54 IIKYYRDVPAILKYLKQNNC--LVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---------IFPGQKTTHFANLKKATG 122 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~--~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---------~~~~~k~~~~~~~~~~~~ 122 (171)
...++|++.++|+.|++.|+ +++++||++. ......++.+++..+|+.+. ..+||++..|+.+++++|
T Consensus 140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYK-NHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCH-HHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred ccCcChhHHHHHHHHHhCCCCceEEEEECCCh-HHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 46789999999999999999 9999999987 77777999999999998762 234899999999999999
Q ss_pred CCC-CcEEEEcCCcccccccccCCc-eEEEeCCCC
Q psy4436 123 IEY-KDMVFFDDEERNSHDVSPLGV-TCIHVKDGM 155 (171)
Q Consensus 123 ~~~-~~~l~vgD~~~di~~a~~~G~-~~i~v~~g~ 155 (171)
++| +++++|||+.+|+.+|+++|+ .++++..+.
T Consensus 219 i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~ 253 (282)
T 3nuq_A 219 LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENE 253 (282)
T ss_dssp CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCC
T ss_pred CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCc
Confidence 998 999999999999999999999 777776654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-21 Score=145.24 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=90.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+++|++++++||+.. . ....++.+++..+|+.+.. ..||++..|+.++++++++|+++
T Consensus 104 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 181 (263)
T 3k1z_A 104 TWQVLDGAEDTLRECRTRGLRLAVISNFDR-R-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181 (263)
T ss_dssp GEEECTTHHHHHHHHHHTTCEEEEEESCCT-T-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cceECcCHHHHHHHHHhCCCcEEEEeCCcH-H-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 468999999999999999999999999866 4 4678999999999987632 35899999999999999999999
Q ss_pred EEEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
+||||+. +|+.+|+++|+.++++.++..
T Consensus 182 ~~vGD~~~~Di~~a~~aG~~~i~~~~~~~ 210 (263)
T 3k1z_A 182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQA 210 (263)
T ss_dssp EEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred EEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence 9999997 999999999999999987653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-22 Score=154.78 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=85.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE---------------ecCCcHHHHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---------------FPGQKTTHFANLK 118 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~---------------~~~~k~~~~~~~~ 118 (171)
.+.++||+.++|+.|+++|++++|+||++. ..++.+++.+|+..+|+.... .+|||+..|+.++
T Consensus 177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~-~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~ 255 (317)
T 4eze_A 177 RMTLSPGLLTILPVIKAKGFKTAIISGGLD-IFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLA 255 (317)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred CCEECcCHHHHHHHHHhCCCEEEEEeCccH-HHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHH
Confidence 467999999999999999999999999987 888889999999988875411 2378899999999
Q ss_pred HHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 119 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 119 ~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
++++++|++++||||+.+|+.+|+++|+.++.
T Consensus 256 ~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 256 ARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 99999999999999999999999999986665
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-22 Score=143.88 Aligned_cols=102 Identities=8% Similarity=0.087 Sum_probs=90.8
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++ ++++++||++. ......++.+++..+|+.+.. ..||++..|+.++++++++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 157 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN 157 (209)
T ss_dssp GGCEECTTHHHHHHHSCTT-SEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCH-HHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCccc
Confidence 4568899999999999999 99999999977 677779999999989987622 3488899999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++|||+.+|+.+|+++|+.++.+.+|..
T Consensus 158 ~i~vGD~~~Di~~a~~aG~~~~~~~~~~~ 186 (209)
T 2hdo_A 158 ALFIGDSVSDEQTAQAANVDFGLAVWGMD 186 (209)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEEGGGCC
T ss_pred EEEECCChhhHHHHHHcCCeEEEEcCCCC
Confidence 99999999999999999999999987653
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=138.43 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=94.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCe---eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAI---IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
.+|+|+||+||||+++...... .+.. ..+.++. +|+.|+++|++++|+||++. ..++..+
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~--------------~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~-~~~~~~l 110 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGN--------------QGEELKAFNVRDGY--GIRCLITSDIDVAIITGRRA-KLLEDRA 110 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEET--------------TSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCC-HHHHHHH
T ss_pred CCCEEEEeCCCCEECCHHHHhh--------------hhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 5799999999999997643211 1111 1111222 89999999999999999988 7788899
Q ss_pred HhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 92 DLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 92 ~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
+.+++..+|+.. +||+..++.++++++++|+++++|||+.+|+.+++++|+.++.
T Consensus 111 ~~lgi~~~f~~~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~ 165 (211)
T 3ij5_A 111 NTLGITHLYQGQ----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV 165 (211)
T ss_dssp HHHTCCEEECSC----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred HHcCCchhhccc----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence 999999888765 8889999999999999999999999999999999999987554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=136.48 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=93.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCe---eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAI---IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
.+|+|+||+||||+++...... .... +...++ .+|+.|+++|++++|+||++. ..+...+
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~--------------~~~~~~~~~~~~~--~~l~~L~~~g~~~~i~T~~~~-~~~~~~~ 80 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFME--------------DGSEIKTFNTLDG--QGIKMLIASGVTTAIISGRKT-AIVERRA 80 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEET--------------TSCEEEEEEHHHH--HHHHHHHHTTCEEEEECSSCC-HHHHHHH
T ss_pred hCCEEEEcCCCCcCCccEeecc--------------CCcEeeeeccccH--HHHHHHHHCCCEEEEEECcCh-HHHHHHH
Confidence 4799999999999987553211 1111 111111 289999999999999999988 7788899
Q ss_pred HhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 92 DLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 92 ~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
+.+++..+|+.. ++|++.++.++++++++|+++++|||+.+|+.+++++|+.++
T Consensus 81 ~~lgl~~~f~~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~ 134 (189)
T 3mn1_A 81 KSLGIEHLFQGR----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMA 134 (189)
T ss_dssp HHHTCSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHcCCHHHhcCc----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 999999888765 678899999999999999999999999999999999998654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.4e-22 Score=142.10 Aligned_cols=95 Identities=16% Similarity=0.106 Sum_probs=85.8
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.+ |+.|+++ ++++++||++. ......++.+++..+|+.+.. ..||+++.|+.++++++ |++++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSI-NEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCH-HHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 578999999 9999999 99999999987 677779999999999987632 34899999999999999 99999
Q ss_pred EEcCCcccccccccCCceEEEeCCC
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+|||+.+|+.+|+++|+.++++.++
T Consensus 148 ~vGD~~~Di~~a~~aG~~~~~~~~~ 172 (201)
T 2w43_A 148 LVSSNAFDVIGAKNAGMRSIFVNRK 172 (201)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECSS
T ss_pred EEeCCHHHhHHHHHCCCEEEEECCC
Confidence 9999999999999999999998764
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=135.57 Aligned_cols=116 Identities=10% Similarity=0.084 Sum_probs=94.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCe-eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAI-IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
.+|+|+||+||||++....... .+.. ....+.....|+.|+++|++++|+||++. ..+...++.
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~--------------~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~-~~~~~~l~~ 88 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGN--------------QGEELKTFHTRDGYGVKALMNAGIEIAIITGRRS-QIVENRMKA 88 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECT--------------TSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHH
T ss_pred CCCEEEEcCCCCcCCCcEEEcc--------------CchhhheeecccHHHHHHHHHCCCEEEEEECcCH-HHHHHHHHH
Confidence 3789999999999985443110 1111 22334445579999999999999999988 778889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
+++..+|+.. +||+..++.++++++++|++++||||+.+|+.+++++|+.++
T Consensus 89 lgi~~~~~~~----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va 140 (195)
T 3n07_A 89 LGISLIYQGQ----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC 140 (195)
T ss_dssp TTCCEEECSC----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred cCCcEEeeCC----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE
Confidence 9998777654 889999999999999999999999999999999999997654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-21 Score=142.33 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=90.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++.|++++++||.+. ......++.+++..+|+.+.. ..||++..++.++++++++++++
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~ 170 (226)
T 1te2_A 92 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170 (226)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cCCcCccHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence 356789999999999999999999999977 667778999999988877632 24788999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+.+|+.+++++|+.++.+.++.+
T Consensus 171 i~iGD~~nDi~~a~~aG~~~~~~~~~~~ 198 (226)
T 1te2_A 171 VALEDSVNGMIASKAARMRSIVVPAPEA 198 (226)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence 9999999999999999999999987653
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.1e-21 Score=139.17 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=89.8
Q ss_pred CeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHhcCcccccceee----Ee--cCCcHHHHHHHHHHhC--C
Q psy4436 53 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE----IF--PGQKTTHFANLKKATG--I 123 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~----~~--~~~k~~~~~~~~~~~~--~ 123 (171)
....++|++.++|+.|+++ |++++++||++. ......++.+++..+|+... .. ++|++..|+++++++| +
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcH-HHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 3467899999999999999 999999999987 77778999999999998641 11 2455788999999999 9
Q ss_pred CCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 124 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 124 ~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|+++++|||+.+|+.+|+++|+.++++.++..
T Consensus 169 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~ 201 (234)
T 2hcf_A 169 SPSQIVIIGDTEHDIRCARELDARSIAVATGNF 201 (234)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSS
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCC
Confidence 999999999999999999999999999988754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-21 Score=139.60 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=81.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccc--ccceee---------Ee--------cCCcHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKE---------IF--------PGQKTTHFA 115 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~--~fd~~~---------~~--------~~~k~~~~~ 115 (171)
..++||+.++|+.|+++|++++|+||++. ..+...++.+++.. +|+... .. +++||..|+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 57899999999999999999999999987 77788999999974 665431 11 247889999
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
++++++++ ++++||||+.+|+.+|+++|+ ++.+..+
T Consensus 164 ~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~ 199 (225)
T 1nnl_A 164 LLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGN 199 (225)
T ss_dssp HHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSS
T ss_pred HHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCc
Confidence 99999998 799999999999999999999 8888544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-21 Score=141.98 Aligned_cols=95 Identities=7% Similarity=0.076 Sum_probs=84.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++. ++++++||++. ......++.+++. |+.+. ...||++..|+.+++++|++|+++
T Consensus 114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 114 VLTPWPDSVPGLTAIKAE-YIIGPLSNGNT-SLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp SCCBCTTHHHHHHHHHHH-SEEEECSSSCH-HHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred hCcCCcCHHHHHHHHHhC-CeEEEEeCCCH-HHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 457799999999999997 99999999987 7777789999876 66541 234899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
++|||+.+|+.+|+++|+.++++.
T Consensus 190 ~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 190 MLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEEC
T ss_pred EEEeCChHhHHHHHHCCCEEEEEe
Confidence 999999999999999999999997
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-21 Score=138.09 Aligned_cols=99 Identities=8% Similarity=0.067 Sum_probs=86.6
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEEE
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMVF 130 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l~ 130 (171)
.++|++.++|+.|+++|++++++||.+. .....++.+++..+|+.+.. ..+|++..|+.++++++++ ++++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND--QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT--HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH--HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 3899999999999999999999999854 45668999999998876622 3488899999999999998 9999
Q ss_pred EcCCcccccccccCCceEEEeCCCCcHH
Q psy4436 131 FDDEERNSHDVSPLGVTCIHVKDGMSHS 158 (171)
Q Consensus 131 vgD~~~di~~a~~~G~~~i~v~~g~~~~ 158 (171)
|||+.+|+.+|+++|+.++++.++...+
T Consensus 158 iGD~~~Di~~a~~aG~~~~~~~~~~~~~ 185 (190)
T 2fi1_A 158 IGDRPIDIEAGQAAGLDTHLFTSIVNLR 185 (190)
T ss_dssp EESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred EcCCHHHHHHHHHcCCeEEEECCCCChh
Confidence 9999999999999999999998876543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=132.92 Aligned_cols=114 Identities=12% Similarity=0.084 Sum_probs=90.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCe---eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAI---IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
.+|+|+||+||||++...... ..+.. +...++. +|+.|+++|++++|+||++. ..++..+
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~--------------~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~-~~~~~~~ 73 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLID--------------SDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQN-PVVAARA 73 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEEC--------------TTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCC-HHHHHHH
T ss_pred cCCEEEEeCCCCcCcCCEeec--------------CCccHhHhcccccHH--HHHHHHHCCCeEEEEECcCh-HHHHHHH
Confidence 479999999999998433211 01111 1111222 79999999999999999988 7788899
Q ss_pred HhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 92 DLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 92 ~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
+.+++. +|.. .+||+..++++++++++++++++||||+.+|+.+++++|+.++.
T Consensus 74 ~~lgi~-~~~~----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~ 127 (176)
T 3mmz_A 74 RKLKIP-VLHG----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV 127 (176)
T ss_dssp HHHTCC-EEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHcCCe-eEeC----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC
Confidence 999988 5543 38899999999999999999999999999999999999976443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-21 Score=141.07 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=82.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHH---HHHhCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANL---KKATGIEY 125 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~---~~~~~~~~ 125 (171)
...++|++.++|+.|++ |++++++||++. ......++. +..+|+.+.. ..||++..|+.+ ++++|++|
T Consensus 97 ~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~-~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~ 172 (240)
T 3smv_A 97 NWPAFPDTVEALQYLKK-HYKLVILSNIDR-NEFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK 172 (240)
T ss_dssp GCCBCTTHHHHHHHHHH-HSEEEEEESSCH-HHHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred cCCCCCcHHHHHHHHHh-CCeEEEEeCCCh-hHHHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence 45789999999999999 899999999977 666667766 5578887632 348999999999 88999999
Q ss_pred CcEEEEcCCc-ccccccccCCceEEEeCC
Q psy4436 126 KDMVFFDDEE-RNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 126 ~~~l~vgD~~-~di~~a~~~G~~~i~v~~ 153 (171)
+++++|||+. +|+.+|+++|+.++++..
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 173 KDILHTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred hhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence 9999999996 999999999999999864
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=138.31 Aligned_cols=98 Identities=9% Similarity=0.160 Sum_probs=88.4
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCc---hhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTT---EMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~---~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
.++|++.++|+.|+++|++++++||+. . ......++.+++..+|+.+.. ..||++..|+.+++++|++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPG-SYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCH-HHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccch-hHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 359999999999999999999999987 6 667778999999999987632 3489999999999999999999
Q ss_pred EEEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 128 MVFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 128 ~l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
+++|||+. +|+.+|+++|+.++++.++
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~~~~~~~ 205 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWAVWINQE 205 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred eEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 99999999 8999999999999999765
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-20 Score=132.90 Aligned_cols=118 Identities=13% Similarity=0.156 Sum_probs=93.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeC-CCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
.+|+|+||+||||++...+... .+.....+ ..-..+|+.|+++|++++++||++. ..+...++.
T Consensus 25 ~ik~vifD~DGTL~~~~~~~~~--------------~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~-~~~~~~l~~ 89 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIYMGN--------------NGEELKAFNVRDGYGIRCALTSDIEVAIITGRKA-KLVEDRCAT 89 (188)
T ss_dssp TCSEEEECCCCCCBCSEEEEET--------------TSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCC-HHHHHHHHH
T ss_pred cCCEEEEeCCCCcCCCCEEecC--------------CCcEEEEeecccHHHHHHHHHCCCeEEEEeCCCh-HHHHHHHHH
Confidence 5799999999999985543110 11111111 1112379999999999999999988 777889999
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+++..+|+. .+||+..+++++++++++|++++||||+.+|+.+++++|+.++..
T Consensus 90 lgl~~~~~~----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 90 LGITHLYQG----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp HTCCEEECS----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred cCCceeecC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 998876654 488999999999999999999999999999999999999987653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-21 Score=137.00 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=92.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCe---eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAI---IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
.+|+|+||+||||++....... .+.. +.+.+++ .|+.|+++|++++++||++. ..+...+
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~~--------------~~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~-~~~~~~l 80 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHIDN--------------HGNELKSFHVQDGM--GLKLLMAAGIQVAIITTAQN-AVVDHRM 80 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEECT--------------TCCEECCBCHHHHH--HHHHHHHTTCEEEEECSCCS-HHHHHHH
T ss_pred cCCEEEEeCCCCCCCCceeecC--------------CchhhhhccccChH--HHHHHHHCCCeEEEEeCcCh-HHHHHHH
Confidence 4799999999999985433110 0111 1111222 59999999999999999988 7788899
Q ss_pred HhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 92 DLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 92 ~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
+.+++..+|+.. +||+..++.++++++++|++++||||+.+|+.+++++|+.++
T Consensus 81 ~~lgl~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~ 134 (191)
T 3n1u_A 81 EQLGITHYYKGQ----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA 134 (191)
T ss_dssp HHHTCCEEECSC----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHcCCccceeCC----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence 999999877655 889999999999999999999999999999999999998763
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-21 Score=144.74 Aligned_cols=99 Identities=11% Similarity=0.071 Sum_probs=85.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vg 132 (171)
....++||+.++|+.|+++| +++|+||++. ..+...++.+++..+|+.......+|+..++.+.+ +++|++|+|||
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~--~~~~~~~~~vg 168 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARG-PTVILSDGDV-VFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVME--CYPARHYVMVD 168 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTS-CEEEEEECCS-SHHHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHH--HSCCSEEEEEC
T ss_pred HhCCcCccHHHHHHHHHhCC-CEEEEeCCCH-HHHHHHHHHcCcHHhcCeeEEecCChHHHHHHHHh--cCCCceEEEEc
Confidence 34678999999999999999 9999999987 67788999999999998764444566666777666 78999999999
Q ss_pred CCcc---cccccccCCceEEEeCCCC
Q psy4436 133 DEER---NSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 133 D~~~---di~~a~~~G~~~i~v~~g~ 155 (171)
|+.. |+.+|+++|+.++++.+|.
T Consensus 169 Ds~~d~~di~~A~~aG~~~i~v~~g~ 194 (231)
T 2p11_A 169 DKLRILAAMKKAWGARLTTVFPRQGH 194 (231)
T ss_dssp SCHHHHHHHHHHHGGGEEEEEECCSS
T ss_pred CccchhhhhHHHHHcCCeEEEeCCCC
Confidence 9999 9999999999999998874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=138.32 Aligned_cols=95 Identities=19% Similarity=0.134 Sum_probs=81.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++++||++. . ....++.+++..+|+.+. ...||+|..|+.++++++++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-R-VKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-H-HHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-H-HHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 568999999999999999999999999865 4 677899999999998762 235888889999999999998
Q ss_pred EEEcCCcc-cccccccCCceEEEeCC
Q psy4436 129 VFFDDEER-NSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~-di~~a~~~G~~~i~v~~ 153 (171)
+||||+.. |+.+|+++|+.++++.+
T Consensus 168 ~~vgD~~~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp EEEESSCCCCCCCSSSCSEEEEEBCT
T ss_pred EEEcCCchHhHHHHHHCCCeEEEECC
Confidence 99999999 99999999999999965
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.82 E-value=6e-21 Score=136.89 Aligned_cols=101 Identities=7% Similarity=0.055 Sum_probs=89.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|+++|++++++||+.. .... .++.+++..+|+.+.. ..||++..+..++++++++|++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCch-HHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 4567899999999999999999999999977 6667 8888999888876522 3478889999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+++|||+.+|+.+|+++|+.++++.++.
T Consensus 160 ~~~iGD~~nDi~~~~~aG~~~i~~~~~~ 187 (207)
T 2go7_A 160 TYYIGDRTLDVEFAQNSGIQSINFLEST 187 (207)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence 9999999999999999999999998764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-21 Score=153.62 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=104.7
Q ss_pred cCCcEEEEeCCCCCCCceecccc----CC----------------ccee-----------cCceeeccCCCeeeeCCCHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDV----IP----------------PFKK-----------IGDKVLDAGGAIIKYYRDVP 62 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~----~~----------------~~~~-----------~~~~~~~~~~~~~~~~~~v~ 62 (171)
+++|+|+||+||||++.++...+ +. .+.. ......+.....+.++||+.
T Consensus 183 ~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pg~~ 262 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMPGAR 262 (415)
T ss_dssp TCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHHCCBCTTHH
T ss_pred cCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHhCccCccHH
Confidence 46899999999999987643211 10 0000 00011111223568999999
Q ss_pred HHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee--------eE-------ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 63 AILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK--------EI-------FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 63 ~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~--------~~-------~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
++|+.|+++|++++++||++. ..+...++.+|+..+|... .+ .+|||+..|+.+++++|++|++
T Consensus 263 e~l~~Lk~~G~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~ 341 (415)
T 3p96_A 263 TTLRTLRRLGYACGVVSGGFR-RIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQ 341 (415)
T ss_dssp HHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcChhh
Confidence 999999999999999999977 7788899999998877532 00 1478899999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEE
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
++||||+.+|+.+|+++|+.++.
T Consensus 342 ~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 342 TVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp EEEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEEECCHHHHHHHHHCCCeEEE
Confidence 99999999999999999987665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.8e-21 Score=140.72 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=84.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|++. ++++++||.+. ......++.+++. |+.+. ...||++..|+.+++++|++|+++
T Consensus 118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 118 RLRPWPDTLAGMHALKAD-YWLAALSNGNT-ALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp SCEECTTHHHHHHHHTTT-SEEEECCSSCH-HHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 457899999999999986 99999999977 6677788998876 76651 235899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
++|||+.+|+.+|+++|+.++++.
T Consensus 194 ~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 194 MLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEEC
T ss_pred EEEcCchHhHHHHHHCCCeEEEEe
Confidence 999999999999999999999997
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-20 Score=133.22 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=90.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++++.|++.|++++++||.+. ......++.+++..+|+.+.. ..+|++..+..++++++++++++
T Consensus 87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 87 NTILFPDTLPTLTHLKKQGIRIGIISTKYR-FRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165 (225)
T ss_dssp GCEECTTHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHe
Confidence 457799999999999999999999999977 677778999999888876522 24788899999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++|||+.+|+.+++.+|+.++.+.++.+
T Consensus 166 i~iGD~~nDi~~~~~aG~~~~~~~~~~~ 193 (225)
T 3d6j_A 166 LYIGDSTVDAGTAAAAGVSFTGVTSGMT 193 (225)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred EEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 9999999999999999999999977643
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-20 Score=139.63 Aligned_cols=102 Identities=11% Similarity=-0.001 Sum_probs=88.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-ceeeE-----ecCCcHHHHHHHHHHhCCCC-C
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEI-----FPGQKTTHFANLKKATGIEY-K 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~~~-----~~~~k~~~~~~~~~~~~~~~-~ 126 (171)
...++|++.++++.|++.|++++++||++. ......++.+++..+| +.+.. ..+|++..+..+++++|+++ +
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 179 (267)
T 1swv_A 101 YASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN 179 (267)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred ccccCccHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCc
Confidence 456789999999999999999999999877 6667788888877775 54411 34888999999999999999 9
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++++|||+.+|+.+|+.+|+.++++.+|..
T Consensus 180 ~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 180 HMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp GEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred CEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 999999999999999999999999988764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-21 Score=158.17 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=84.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCC--chhHHHHHHHHhc--CcccccceeeE-----ecCCcHHHHHHHHHHhCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRT--TEMLRAHQLVDLF--NWNQHFDHKEI-----FPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~--~~~~~~~~~l~~~--~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~ 124 (171)
...++|++.++|+.|+++|++++|+||+ .. ......+... ++..+|+.+.. ..||+|++|+++++++|++
T Consensus 98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~ 176 (555)
T 3i28_A 98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDD-RAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 176 (555)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCC-STTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hcCcChhHHHHHHHHHHCCCEEEEEeCCCccc-cchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 4678999999999999999999999997 11 1112223333 67788987732 3599999999999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEeCCCCcH
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
|++|+||||+..|+.+|+++|+.++++.++...
T Consensus 177 p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~ 209 (555)
T 3i28_A 177 PSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 209 (555)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCEEEECSSHHHH
T ss_pred hhHEEEECCcHHHHHHHHHcCCEEEEECCCccH
Confidence 999999999999999999999999999876543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-20 Score=140.98 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=90.5
Q ss_pred CeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCC---
Q psy4436 53 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGI--- 123 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~--- 123 (171)
....++|++.++|+.|++. |++++++||+.. ......++.+++. +|+.+.. ..||++..|+.+++++++
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~-~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 188 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTR-DMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPIN 188 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCH-HHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCH-HHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence 3467899999999999999 999999999977 6677788888886 4654421 248888999999999999
Q ss_pred ----CCCcEEEEcCCcccccccccCCceEEEeCCCCcHHH
Q psy4436 124 ----EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 159 (171)
Q Consensus 124 ----~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~ 159 (171)
+|+++++|||+.+|+.+|+++|+.++.+.++.+..+
T Consensus 189 ~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~ 228 (275)
T 2qlt_A 189 EQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDF 228 (275)
T ss_dssp SSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHH
T ss_pred ccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 999999999999999999999999999988876544
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-21 Score=142.75 Aligned_cols=135 Identities=10% Similarity=0.081 Sum_probs=91.3
Q ss_pred CCcEEEEeCCCCCCCceeccc-----cCC---cceecC---ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 15 FPKLAVFDLDHTLWPFHVYID-----VIP---PFKKIG---DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~-----~~~---~~~~~~---~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
++|+|+||+||||+++..... ... .+.... ..+.........+.|++.++|+.|+++|++++|+||++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 479999999999998543210 000 000000 000000011123578999999999999999999999865
Q ss_pred hHHHHHHHHhcCccccccee--------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 84 MLRAHQLVDLFNWNQHFDHK--------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 84 ~~~~~~~l~~~~l~~~fd~~--------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
......++. +..+|+.+ ....||+|+.|..+++++++ ++||||+..|+.+|+++|+.++++.+|.
T Consensus 116 -~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 116 -TKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRAS 188 (211)
T ss_dssp -CSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred -HHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence 222223333 33334332 12358888889999999998 9999999999999999999999998875
Q ss_pred c
Q psy4436 156 S 156 (171)
Q Consensus 156 ~ 156 (171)
.
T Consensus 189 ~ 189 (211)
T 2b82_A 189 N 189 (211)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-20 Score=146.84 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=96.8
Q ss_pred cccCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--------
Q psy4436 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE-------- 83 (171)
Q Consensus 12 ~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~-------- 83 (171)
|..++|+++||+||||++...... +......-..++||+.++|+.|+++|++++|+||++.
T Consensus 54 ~~~~~k~v~fD~DGTL~~~~~~~~-----------~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~ 122 (416)
T 3zvl_A 54 VKPQGKVAAFDLDGTLITTRSGKV-----------FPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPA 122 (416)
T ss_dssp CCCCSSEEEECSBTTTEECSSCSS-----------SCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCH
T ss_pred CCCCCeEEEEeCCCCccccCCCcc-----------CCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCH
Confidence 445689999999999985432110 0011111224799999999999999999999999651
Q ss_pred h---HHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhC----CCCCcEEEEcCCc----------------
Q psy4436 84 M---LRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATG----IEYKDMVFFDDEE---------------- 135 (171)
Q Consensus 84 ~---~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~----~~~~~~l~vgD~~---------------- 135 (171)
. ..+...++.+++. |+.+.. +.||+|.+|+.++++++ ++|++++||||+.
T Consensus 123 ~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s 200 (416)
T 3zvl_A 123 EVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFS 200 (416)
T ss_dssp HHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSC
T ss_pred HHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCC
Confidence 1 2256678888985 765522 35899999999999998 9999999999997
Q ss_pred -ccccccccCCceEEEe
Q psy4436 136 -RNSHDVSPLGVTCIHV 151 (171)
Q Consensus 136 -~di~~a~~~G~~~i~v 151 (171)
.|+.+|+++|+.++..
T Consensus 201 ~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 201 CADRLFALNVGLPFATP 217 (416)
T ss_dssp CHHHHHHHHHTCCEECH
T ss_pred hhhHHHHHHcCCcccCc
Confidence 6999999999987653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.5e-21 Score=140.59 Aligned_cols=92 Identities=8% Similarity=0.073 Sum_probs=75.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----eEe---------cCCcHH-HHH----
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----EIF---------PGQKTT-HFA---- 115 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----~~~---------~~~k~~-~~~---- 115 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++ ++..+ +.+ ... +||.|. .+.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 467899999999999999999999999987 66776777 65443 433 112 567766 354
Q ss_pred ---HHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 116 ---NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 116 ---~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
.++++++++|++++||||+..|+.+|+++|+.++
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 8889999999999999999999999999999876
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-20 Score=133.79 Aligned_cols=96 Identities=17% Similarity=0.219 Sum_probs=79.5
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---------------EecCCcHHHHHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---------------IFPGQKTTHFANLKK 119 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---------------~~~~~k~~~~~~~~~ 119 (171)
..++|++.++|+.|+++|++++++|+++. ......++.+++..+|.... ..+.+|+..+..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 46789999999999999999999999876 56666788888876664321 012467889999999
Q ss_pred HhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 120 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 120 ~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+++++|+++++|||+.+|+.+++++|+.+ ++.
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~-~~~ 185 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKI-AFC 185 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEE-EES
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEE-EEC
Confidence 99999999999999999999999999864 443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.7e-20 Score=132.66 Aligned_cols=95 Identities=20% Similarity=0.252 Sum_probs=83.5
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++|++.++|+.|++.|++++++||+ . .....++.+++..+|+.+. ...||++..|+.+++++|++|++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~--~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS-K--NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC-T--THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc-H--HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 467899999999999999999999998 2 2455788899998898762 1348888899999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeC
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+|||+.+|+.+|+++|+.++.+.
T Consensus 167 ~iGD~~nDi~~a~~aG~~~~~~~ 189 (221)
T 2wf7_A 167 GLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEES
T ss_pred EEeCCHHHHHHHHHCCCEEEEEC
Confidence 99999999999999999999885
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-19 Score=135.06 Aligned_cols=50 Identities=10% Similarity=0.076 Sum_probs=46.9
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++.+|+.++++++++|+++++|||+ .+|+.+|+++|+.++++.+|..
T Consensus 181 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~ 231 (264)
T 3epr_A 181 GKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFT 231 (264)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCC
Confidence 3888999999999999999999999999 6999999999999999998864
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-19 Score=124.79 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=88.2
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHH--HHHHHHhhCCcEEEEEcCCchhHHHHHHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVP--AILKYLKQNNCLVAAASRTTEMLRAHQLV 91 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~L~~~g~~i~i~S~~~~~~~~~~~l 91 (171)
+.+|+|+||+||||++...+.. ..+.....+ .+. ..|+.|+++|++++|+||+ . .+...+
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~--------------~~g~~~~~f-~~~D~~~L~~Lk~~Gi~~~I~Tg~-~--~~~~~l 68 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVS--------------GDQKEIISY-DVKDAIGISLLKKSGIEVRLISER-A--CSKQTL 68 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCC--------------SSCCCEEEE-EHHHHHHHHHHHHTTCEEEEECSS-C--CCHHHH
T ss_pred hcCcEEEEeCccceECCcEEEc--------------CCCCEEEEE-ecCcHHHHHHHHHCCCEEEEEeCc-H--HHHHHH
Confidence 3589999999999998655321 112222222 122 2699999999999999998 3 355578
Q ss_pred H--hcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 92 D--LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 92 ~--~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+ .+++. +|. ..++|+..+++++++++++|++++||||+.+|+.+++.+|+.+ .+.++
T Consensus 69 ~~l~lgi~-~~~----g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~-a~~na 127 (168)
T 3ewi_A 69 SALKLDCK-TEV----SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSA-VPADA 127 (168)
T ss_dssp HTTCCCCC-EEC----SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEE-ECTTC
T ss_pred HHhCCCcE-EEE----CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEE-EeCCh
Confidence 8 56665 442 2478899999999999999999999999999999999999874 45443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=131.10 Aligned_cols=50 Identities=14% Similarity=0.249 Sum_probs=46.8
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++..|+.++++++++++++++|||+ .+|+.+|+++|+.+++|.+|..
T Consensus 186 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~ 236 (268)
T 3qgm_A 186 GKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVT 236 (268)
T ss_dssp STTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSC
T ss_pred CCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCC
Confidence 4888999999999999999999999999 5999999999999999988765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.9e-20 Score=133.43 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=86.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-ceee-----Eec--CCcHHHHHHHHHHhCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKE-----IFP--GQKTTHFANLKKATGIEY 125 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~~-----~~~--~~k~~~~~~~~~~~~~~~ 125 (171)
...++|++.++++.|+. +++++||+.. ......++.+++..+| +.+. ... +||+..|+++++++|++|
T Consensus 85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~ 160 (229)
T 2fdr_A 85 DVKIIDGVKFALSRLTT---PRCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP 160 (229)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred CCccCcCHHHHHHHhCC---CEEEEECCCh-hHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCCh
Confidence 35678999999998875 8999999977 6677789999999989 7652 235 888899999999999999
Q ss_pred CcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+++++|||+.+|+.+|+++|+.++++.++..
T Consensus 161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~ 191 (229)
T 2fdr_A 161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASH 191 (229)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred hHeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence 9999999999999999999999999977654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-19 Score=133.96 Aligned_cols=95 Identities=9% Similarity=0.094 Sum_probs=80.7
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee--------eE-------ecCCcHHHHHHHHHH
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK--------EI-------FPGQKTTHFANLKKA 120 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~--------~~-------~~~~k~~~~~~~~~~ 120 (171)
.++||+.++|+.|+++|++++|+||++. ..++.+++.+|+..+|... .. ..++|+..++.++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNS-FVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 5699999999999999999999999988 7888899999998666432 01 124567889999999
Q ss_pred hC---CCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 121 TG---IEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 121 ~~---~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
++ ++|++|++|||+.+|+.+++.+|+.++..
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 99 99999999999999999999999876653
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-19 Score=132.88 Aligned_cols=50 Identities=10% Similarity=0.223 Sum_probs=45.1
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCcH
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
||++..|+.+++++|++++++++|||+ .+|+.+|+.+|+.++++.+|...
T Consensus 183 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~ 233 (266)
T 3pdw_A 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTK 233 (266)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC---
T ss_pred CCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence 788899999999999999999999999 79999999999999999988754
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-19 Score=129.19 Aligned_cols=95 Identities=13% Similarity=0.061 Sum_probs=82.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc-eeeE-----e---cCCcHHHHHHHHHHhCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-HKEI-----F---PGQKTTHFANLKKATGIE 124 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd-~~~~-----~---~~~k~~~~~~~~~~~~~~ 124 (171)
...++||+.++|+.|+++ ++++++||++. ......++.+++..+|+ .+.. . .+|+|..+..++++++++
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChH-HHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 567899999999999999 99999999977 77888999999999884 3321 1 137778899999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEE
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
|++++||||+.+|+.+|+++|+.++.
T Consensus 145 ~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred CCEEEEEeCChhhHHHHHhcCccEEE
Confidence 99999999999999999999998653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=127.30 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=46.6
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCC
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~ 155 (171)
.||++..|+.+++++|++|+++++|||+. +|+.+|+++|+.++++.+|.
T Consensus 178 ~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~ 227 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGK 227 (259)
T ss_dssp STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 58999999999999999999999999998 99999999999999998873
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=131.08 Aligned_cols=51 Identities=16% Similarity=0.278 Sum_probs=47.4
Q ss_pred ecCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCc
Q psy4436 106 FPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 106 ~~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~ 156 (171)
..||+|.+|+.++++++++|++++||||+ .+|+.+|+++|+.++++.+|..
T Consensus 181 ~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~ 232 (264)
T 1yv9_A 181 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT 232 (264)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCC
Confidence 45999999999999999999999999999 5999999999999999988764
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-19 Score=139.86 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=84.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-e--------------EecCCcHHHHHHH
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-E--------------IFPGQKTTHFANL 117 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~--------------~~~~~k~~~~~~~ 117 (171)
...+++|++.++++.|++.|++++++||+.. ......++.+++..+|+.. + ...+||++.|+.+
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFT-YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 3467899999999999999999999999977 7788899999998877643 1 1137899999999
Q ss_pred HHHhCCCCCcEEEEcCCcccccccccCCceEEE
Q psy4436 118 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 150 (171)
Q Consensus 118 ~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~ 150 (171)
+++++++++++++|||+.+|+.+++++|+.++.
T Consensus 254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 999999999999999999999999999997665
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-19 Score=131.31 Aligned_cols=90 Identities=7% Similarity=-0.003 Sum_probs=76.3
Q ss_pred CeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEE
Q psy4436 53 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 131 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~v 131 (171)
....++||+.++|+.|+++ |++++|+||++. ..+...++.+++ |+.+.. ..++++++++|++++||
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~gl---f~~i~~---------~~~~~~~~~~~~~~~~v 136 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLL-KYHHCVGEKYRW---VEQHLG---------PQFVERIILTRDKTVVL 136 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCS-SCTTTHHHHHHH---HHHHHC---------HHHHTTEEECSCGGGBC
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCCh-hhHHHHHHHhCc---hhhhcC---------HHHHHHcCCCcccEEEE
Confidence 4568899999999999999 999999999977 566668888887 655421 12678899999999999
Q ss_pred cCCccc----ccccc-cCCceEEEeCCCC
Q psy4436 132 DDEERN----SHDVS-PLGVTCIHVKDGM 155 (171)
Q Consensus 132 gD~~~d----i~~a~-~~G~~~i~v~~g~ 155 (171)
||+..| +.+|+ ++|+.++++.++.
T Consensus 137 gDs~~dD~~~i~~A~~~aG~~~i~~~~~~ 165 (193)
T 2i7d_A 137 GDLLIDDKDTVRGQEETPSWEHILFTCCH 165 (193)
T ss_dssp CSEEEESSSCCCSSCSSCSSEEEEECCGG
T ss_pred CCchhhCcHHHhhcccccccceEEEEecc
Confidence 999999 99999 9999999997643
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=125.94 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=88.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc---CcccccceeeE---ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHKEI---FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~---~l~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++||+.++|+.|+++|++++|+||++. ...+..++.+ ++..+|+.+.. .+||+|..|+.++++++++|++
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~ 206 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN 206 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCccc
Confidence 467899999999999999999999999987 6677777754 58889987521 1699999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
|+||||+..|+.+|+++|+.++++.++
T Consensus 207 ~l~VgDs~~di~aA~~aG~~~i~v~~~ 233 (261)
T 1yns_A 207 ILFLTDVTREASAAEEADVHVAVVVRP 233 (261)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCC
Confidence 999999999999999999999999653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-18 Score=126.07 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=75.0
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc--ccccee---------e--EecCCcHHH-HHHHHHHh
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHK---------E--IFPGQKTTH-FANLKKAT 121 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~--~~fd~~---------~--~~~~~k~~~-~~~~~~~~ 121 (171)
.++|++.++++.|+++|++++++||+.. ......++.+++. .+|... . ..++|.+.. ++.+.+.+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLS-ESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK 160 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence 4789999999999999999999999977 7778899999984 344321 0 123454433 44455666
Q ss_pred CCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 122 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 122 ~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+++|+++++|||+.+|+.++ ++|+.++.+..+
T Consensus 161 ~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~ 192 (219)
T 3kd3_A 161 GLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYM 192 (219)
T ss_dssp GGCCSEEEEEESSHHHHHHH-HHTSCSEEEEEC
T ss_pred CCCCCCEEEEECCHhHHHHH-hCCCCcEEEecc
Confidence 99999999999999999998 579987766543
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-19 Score=129.50 Aligned_cols=89 Identities=8% Similarity=0.011 Sum_probs=77.8
Q ss_pred CeeeeCCCHHHHHHHHhhC-CcEEEEEcCCchhHHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHHHHhCCCCCcEEE
Q psy4436 53 AIIKYYRDVPAILKYLKQN-NCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~-g~~i~i~S~~~~~~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ 130 (171)
....++||+.++|+.|+++ |++++|+||++. ......++++++.. +|+ ..++++++++|+++++
T Consensus 72 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~f~-------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 72 FELEPLPGAVEAVKEMASLQNTDVFICTSPIK-MFKYCPYEKYAWVEKYFG-------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCS-CCSSHHHHHHHHHHHHHC-------------GGGGGGEEECSCSTTS
T ss_pred hcCCcCcCHHHHHHHHHhcCCCeEEEEeCCcc-chHHHHHHHhchHHHhch-------------HHHHHHhccCCccEEE
Confidence 3568999999999999999 999999999977 55666888888887 775 4566778999999999
Q ss_pred EcCCccc----ccccc-cCCceEEEeCCCC
Q psy4436 131 FDDEERN----SHDVS-PLGVTCIHVKDGM 155 (171)
Q Consensus 131 vgD~~~d----i~~a~-~~G~~~i~v~~g~ 155 (171)
|||+..| +.+|+ ++|+.++++.++.
T Consensus 138 vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~ 167 (197)
T 1q92_A 138 SADLLIDDRPDITGAEPTPSWEHVLFTACH 167 (197)
T ss_dssp CCSEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred ECcccccCCchhhhcccCCCceEEEecCcc
Confidence 9999999 99999 9999999997654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=123.01 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=47.2
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCcH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
.|||+..|+.+++++|++|+++++|||+ .+|+.+|+++|+.++++.+|...
T Consensus 194 ~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~ 245 (271)
T 1vjr_A 194 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETT 245 (271)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence 3789999999999999999999999999 59999999999999999988653
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.71 E-value=7e-19 Score=129.79 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=79.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEE---------------------------------EEcCCchhHHHHHHHHhcC-cccc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVA---------------------------------AASRTTEMLRAHQLVDLFN-WNQH 99 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~---------------------------------i~S~~~~~~~~~~~l~~~~-l~~~ 99 (171)
...+++++.++++.|++.|++++ ++||.+ + .....++.++ +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~-~~~~~~~~~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-T-HGRGFYPACGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-S-BSSTTCBCHHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-C-CCCCeeecchHHHHH
Confidence 45678999999999999999999 888864 1 1222233333 3334
Q ss_pred ccee-----eEecCCcHHHHHHHHHHhCCCCCcEEEEcCC-cccccccccCCceEEEeCCCCc
Q psy4436 100 FDHK-----EIFPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 100 fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~-~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|+.. ....+||+..|+.+++++|++|+++++|||+ .+|+.+++.+|+.++++.+|..
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~ 225 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVS 225 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSC
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCC
Confidence 4332 2345899999999999999999999999999 6999999999999999988764
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=124.56 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=47.4
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCcH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~~ 157 (171)
.||++.+|+.++++++++|+++++|||+. +|+.+|+++|+.++++.+|...
T Consensus 214 ~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~ 265 (306)
T 2oyc_A 214 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSR 265 (306)
T ss_dssp STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCC
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCC
Confidence 48888999999999999999999999996 9999999999999999988753
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.9e-17 Score=122.77 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=46.8
Q ss_pred cCCcHHHHHHHHHHh----CCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKAT----GIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~----~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
.||+|.+|+.+++++ +++|++++||||+. .|+.+|+++|+.++++.+|..
T Consensus 203 ~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~ 257 (284)
T 2hx1_A 203 GKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNT 257 (284)
T ss_dssp STTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSS
T ss_pred cCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence 488899999999999 99999999999995 899999999999999988865
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=120.93 Aligned_cols=136 Identities=14% Similarity=0.070 Sum_probs=90.6
Q ss_pred cCCcEEEEeCCCCCCCceecc----ccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--hHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYI----DVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLR 86 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~--~~~ 86 (171)
..+++||||+||||++...+. ....+| ... ..+... ....++||+.++|+.|+++|++++|+||++. ...
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~ 133 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDWINK--AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDA 133 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHHHHH--CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHHHHc--CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence 357899999999999864221 001112 111 001110 1357899999999999999999999999873 145
Q ss_pred HHHHHHhcCcc--cccceeeEecC-CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccc-------c---------CCce
Q psy4436 87 AHQLVDLFNWN--QHFDHKEIFPG-QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS-------P---------LGVT 147 (171)
Q Consensus 87 ~~~~l~~~~l~--~~fd~~~~~~~-~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~-------~---------~G~~ 147 (171)
....++.+|+. .+|+.+..... .|+.....+. ..+ ...++||||+..|+.+|+ + +|+.
T Consensus 134 ~~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~~~~~-~~~--~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~ 210 (258)
T 2i33_A 134 TIKNLERVGAPQATKEHILLQDPKEKGKEKRRELV-SQT--HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEK 210 (258)
T ss_dssp HHHHHHHHTCSSCSTTTEEEECTTCCSSHHHHHHH-HHH--EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTT
T ss_pred HHHHHHHcCCCcCCCceEEECCCCCCCcHHHHHHH-HhC--CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCc
Confidence 55678889988 66665533221 2233344333 233 345999999999999994 3 7999
Q ss_pred EEEeCCCC
Q psy4436 148 CIHVKDGM 155 (171)
Q Consensus 148 ~i~v~~g~ 155 (171)
++.++++.
T Consensus 211 ~i~lpn~~ 218 (258)
T 2i33_A 211 FIIFPNPM 218 (258)
T ss_dssp EEECCCCS
T ss_pred eEECCCCC
Confidence 99998765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-17 Score=129.85 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=91.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc--eeeE----------------ecCCcHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HKEI----------------FPGQKTTHFA 115 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd--~~~~----------------~~~~k~~~~~ 115 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+ .+.. ..||+|..|.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~-~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 457899999999999999999999999987 67777999999999998 4411 2689999999
Q ss_pred HHHHHhC--------------CCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 116 NLKKATG--------------IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 116 ~~~~~~~--------------~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
.++++++ ++|++|+||||+..|+.+|+++|+.++++.+|..
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~ 346 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCcc
Confidence 9999999 8999999999999999999999999999988763
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-16 Score=116.21 Aligned_cols=48 Identities=19% Similarity=0.344 Sum_probs=45.9
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCC
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g 154 (171)
.+||+..|+.+++++|++++++++|||+. +|+.+|+.+|+.++++.+|
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g 237 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG 237 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence 48999999999999999999999999998 9999999999999999877
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3e-18 Score=122.73 Aligned_cols=96 Identities=8% Similarity=-0.024 Sum_probs=73.2
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE------ecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI------FPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~------~~~~k~~~~~~~~~~~~~~~~ 126 (171)
....++|++.++|+.|+++|++++++||++. ...... +.+++..+|+.... .++|.+.....+++++ +|+
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~ 151 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFE-EVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG 151 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEET-TTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcH-HHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence 4568899999999999999999999999877 556656 88888776543311 1233333344555555 899
Q ss_pred cEEEEcCCcccccccccCCceEEEeCC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
++++|||+.+|+.+|+++|+. +++.+
T Consensus 152 ~~i~iGD~~~Di~~~~~ag~~-v~~~~ 177 (201)
T 4ap9_A 152 FILAMGDGYADAKMFERADMG-IAVGR 177 (201)
T ss_dssp CEEEEECTTCCHHHHHHCSEE-EEESS
T ss_pred cEEEEeCCHHHHHHHHhCCce-EEECC
Confidence 999999999999999999996 55544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=120.90 Aligned_cols=126 Identities=16% Similarity=0.092 Sum_probs=95.2
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~ 93 (171)
++.+++|.|||+....... |+. .. .-....++||+.++|+.|+++|++++++||++.. ..+..+++.
T Consensus 159 ~~~i~iD~dgtl~~~~~~~----~~~------~~-~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~ 227 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRG----PYD------LE-KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM 227 (301)
T ss_dssp CEEEEEETBTTTBCCSSCC----TTC------GG-GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred cceEEEeCCCCcccccCCC----chh------hh-hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHh
Confidence 5789999999986521110 000 00 1124578999999999999999999999998751 112446666
Q ss_pred --------cCcccccceeeE----ecCCcHHHHHHHHHHhCCCCCc-EEEEcCCcccccccccCCceEEEeCCC
Q psy4436 94 --------FNWNQHFDHKEI----FPGQKTTHFANLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 94 --------~~l~~~fd~~~~----~~~~k~~~~~~~~~~~~~~~~~-~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+++ +|+.+.. ..||+|..+..++++++.++.+ ++||||+..|+.+|+++|+.++.|.||
T Consensus 228 ~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 228 TRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred cccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 788 4665522 2478899999999999887644 799999999999999999999999998
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-17 Score=118.38 Aligned_cols=149 Identities=15% Similarity=0.040 Sum_probs=105.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeecc--CCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDA--GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
..+++||||||||++..........+.- ..-.+. ..-.+.+.||+.++|+.|++. ++++|+|++.. ..+...++
T Consensus 27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~--~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~-~~a~~vl~ 102 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSSFKPISNADFIV--PVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLA-KYADPVAD 102 (195)
T ss_dssp TCCEEEECCBTTTEEEESSCCTTCSEEE--EEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHH
T ss_pred CCeEEEEccccceEcccccCCCCcccee--eeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCH-HHHHHHHH
Confidence 3579999999999975433211000000 000000 012367899999999999998 99999999988 88899999
Q ss_pred hcCcccccceeeE---ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc---HHHHHHHHHH
Q psy4436 93 LFNWNQHFDHKEI---FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS---HSVLHKGLKQ 166 (171)
Q Consensus 93 ~~~l~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~---~~~~~~~~~~ 166 (171)
.+++..+|+.+.. +...| ..|.+.++++|.++++|++|||+..++.++.++|+.+..+.+..+ ...+...|+.
T Consensus 103 ~ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~L~~~L~~ 181 (195)
T 2hhl_A 103 LLDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEG 181 (195)
T ss_dssp HHCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCTTCCHHHHHHHHHHH
T ss_pred HhCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCCChHHHHHHHHHHHH
Confidence 9999999977621 11122 457888889999999999999999999999999998766644322 3344445555
Q ss_pred hh
Q psy4436 167 WA 168 (171)
Q Consensus 167 ~~ 168 (171)
.+
T Consensus 182 l~ 183 (195)
T 2hhl_A 182 LS 183 (195)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.6e-16 Score=117.73 Aligned_cols=87 Identities=10% Similarity=0.154 Sum_probs=71.9
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
.++|++.++|+.|+++|++++++||.+. ..+...++.+++..+|+.+ .+..|....+...+.+ ++++|||+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~~~--~~~~k~~~~k~~~~~~-----~~~~vGD~~ 215 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNR-FVAKWVAEELGLDDYFAEV--LPHEKAEKVKEVQQKY-----VTAMVGDGV 215 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECSC--CGGGHHHHHHHHHTTS-----CEEEEECTT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCChhHhHhc--CHHHHHHHHHHHHhcC-----CEEEEeCCc
Confidence 7899999999999999999999999988 7788899999999888775 3344555555555433 889999999
Q ss_pred ccccccccCCceEEEe
Q psy4436 136 RNSHDVSPLGVTCIHV 151 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v 151 (171)
+|+.+++++|+ .+.+
T Consensus 216 nDi~~~~~Ag~-~va~ 230 (280)
T 3skx_A 216 NDAPALAQADV-GIAI 230 (280)
T ss_dssp TTHHHHHHSSE-EEEC
T ss_pred hhHHHHHhCCc-eEEe
Confidence 99999999997 3443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=119.05 Aligned_cols=48 Identities=13% Similarity=0.203 Sum_probs=44.6
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCc-ccccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~-~di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++.+|+.++++ ++|++++||||+. .|+.+|+++|+.++++.+|..
T Consensus 186 ~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~ 234 (263)
T 1zjj_A 186 GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVS 234 (263)
T ss_dssp STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSC
T ss_pred cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCC
Confidence 48999999999998 9999999999996 899999999999999988765
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.7e-15 Score=114.23 Aligned_cols=95 Identities=14% Similarity=0.244 Sum_probs=76.5
Q ss_pred eCCCHHHHHHHHhhC-CcEEEEEcCC---------------------chhHHHHHHHHhcCccccccee-----------
Q psy4436 57 YYRDVPAILKYLKQN-NCLVAAASRT---------------------TEMLRAHQLVDLFNWNQHFDHK----------- 103 (171)
Q Consensus 57 ~~~~v~~~l~~L~~~-g~~i~i~S~~---------------------~~~~~~~~~l~~~~l~~~fd~~----------- 103 (171)
..+++.++++.|++. |+++++.|+. .. ..+...++..++..+|...
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNL-LAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHH-HHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHH-HHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 456889999999988 9999999976 34 4556678888887766432
Q ss_pred --eEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 104 --EIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 104 --~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+..+ ++|+..+++++++++++++++++|||+.+|+.+++.+|+. +.+.+
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~ 254 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKN 254 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTT
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECC
Confidence 2333 7889999999999999999999999999999999999954 44544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.60 E-value=6.8e-15 Score=108.80 Aligned_cols=115 Identities=13% Similarity=0.057 Sum_probs=84.9
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||++... .+.+...++|++|+++|++++++|+++. ......++.+
T Consensus 2 m~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~v~i~TGR~~-~~~~~~~~~l 57 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNR-----------------------MIHEKALEAIRRAESLGIPIMLVTGNTV-QFAEAASILI 57 (231)
T ss_dssp CCCEEEEESTTTTBCTTS-----------------------CBCHHHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHH
T ss_pred ceeEEEEECCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCh-hHHHHHHHHc
Confidence 378999999999987321 2356678888888888899999998866 3344344433
Q ss_pred Cccc-------------------------------------------------------------------------ccc
Q psy4436 95 NWNQ-------------------------------------------------------------------------HFD 101 (171)
Q Consensus 95 ~l~~-------------------------------------------------------------------------~fd 101 (171)
++.. +|+
T Consensus 58 ~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (231)
T 1wr8_A 58 GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 137 (231)
T ss_dssp TCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCE
T ss_pred CCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEE
Confidence 3211 011
Q ss_pred e------eeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 102 H------KEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 102 ~------~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
. .+..+ +||+..+++++++++++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 138 ~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~ 197 (231)
T 1wr8_A 138 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA 197 (231)
T ss_dssp EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred EEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence 1 12223 6788999999999999999999999999999999999987 566554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-16 Score=112.57 Aligned_cols=132 Identities=12% Similarity=0.030 Sum_probs=96.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeecc--CCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDA--GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
..+++|+|||+||++..........+.- ..-.+. ......+.||+.++|+.|++. ++++|.|++.. ..+...++
T Consensus 14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~--~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~-~~a~~vl~ 89 (181)
T 2ght_A 14 DKICVVINLDETLVHSSFKPVNNADFII--PVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVAD 89 (181)
T ss_dssp TSCEEEECCBTTTEEEESSCCSSCSEEE--EEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHH
T ss_pred CCeEEEECCCCCeECCcccCCCCcccee--eeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCH-HHHHHHHH
Confidence 3579999999999975433211000000 000000 012467899999999999998 99999999988 88999999
Q ss_pred hcCcccccceeeE---ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 93 LFNWNQHFDHKEI---FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 93 ~~~l~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
.++...+|+.+.. +...+ ..|.+.++++|.++++|++|||+..++.++.++|+....+
T Consensus 90 ~ld~~~~f~~~~~rd~~~~~k-~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~ 150 (181)
T 2ght_A 90 LLDKWGAFRARLFRESCVFHR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASW 150 (181)
T ss_dssp HHCTTCCEEEEECGGGSEEET-TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCC
T ss_pred HHCCCCcEEEEEeccCceecC-CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccc
Confidence 9999988876621 11111 3477788889999999999999999999999999875444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-14 Score=109.09 Aligned_cols=45 Identities=11% Similarity=0.181 Sum_probs=39.1
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
.+|+..++++++++|++++++++|||+.+|+.+++.+|+ ++.+.+
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~-~vam~n 240 (279)
T 4dw8_A 196 IDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGM-GVAMGN 240 (279)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCc-EEEcCC
Confidence 367889999999999999999999999999999999994 444443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.57 E-value=9e-15 Score=108.13 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=91.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||++.. ..+.|.+.++|++|+++|++++++|+++. ..+...++.+
T Consensus 4 m~kli~~DlDGTLl~~~-----------------------~~i~~~~~~~l~~l~~~g~~~~i~TGr~~-~~~~~~~~~l 59 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTDRD-----------------------RLISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFL 59 (227)
T ss_dssp CCCEEEEEHHHHSBCTT-----------------------SCBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHH
T ss_pred ceEEEEEECCCCCcCCC-----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCc-HHHHHHHHHh
Confidence 37999999999997631 13457789999999999999999999987 6667788877
Q ss_pred Cccccc---------c--e-------------------------------------------------------------
Q psy4436 95 NWNQHF---------D--H------------------------------------------------------------- 102 (171)
Q Consensus 95 ~l~~~f---------d--~------------------------------------------------------------- 102 (171)
++..++ + .
T Consensus 60 ~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
T 1l6r_A 60 GINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 139 (227)
T ss_dssp TCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEE
T ss_pred CCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEE
Confidence 765411 1 0
Q ss_pred -----eeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 103 -----KEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 103 -----~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++..| .+|+..+++++++++++++++++|||+.+|+.+++.+|+. +.+.++.
T Consensus 140 ~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~~ 198 (227)
T 1l6r_A 140 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANAT 198 (227)
T ss_dssp EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSC
T ss_pred ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCch
Confidence 01123 5678889999999999999999999999999999999974 5665543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=111.13 Aligned_cols=45 Identities=11% Similarity=0.054 Sum_probs=39.1
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
.+|+..++++++++|++++++++|||+.+|+.+++.+|+ ++.+.+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~-~vam~n 271 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKY-SYAMAN 271 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTE-EEECTT
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCC-eEEcCC
Confidence 457788999999999999999999999999999999995 344444
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.9e-14 Score=108.37 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=38.8
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+|+..++++++.+|++++++++|||+.+|+.+++.+|+ ++++.++
T Consensus 209 ~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~-~vAm~Na 253 (285)
T 3pgv_A 209 SKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGK-GCIMANA 253 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCC-EEEccCC
Confidence 47788999999999999999999999999999999994 4555443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.2e-14 Score=106.87 Aligned_cols=38 Identities=16% Similarity=0.279 Sum_probs=33.8
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCc
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 146 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~ 146 (171)
+|+..++.+++.+|++++++++|||+.+|+.+++.+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~ 234 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGL 234 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTE
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCc
Confidence 37888999999999999999999999999999999995
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=107.41 Aligned_cols=46 Identities=20% Similarity=0.285 Sum_probs=39.9
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.+|+..++++++++|++++++++|||+.+|+.+++.+|+ ++.+.++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~-~vam~na 244 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDV-TIAMKNS 244 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSE-EEEETTS
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCc-eEEecCc
Confidence 568899999999999999999999999999999999994 4444443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.9e-14 Score=105.67 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=40.7
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.+|+..++++++.+|++++++++|||+.+|+.+++.+|+ ++.+.++.
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~-~vam~na~ 256 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGI-SYAVSNAR 256 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEEETTSC
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC-EEEcCCCC
Confidence 357788999999999999999999999999999999994 56665543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9.7e-16 Score=115.71 Aligned_cols=86 Identities=10% Similarity=0.094 Sum_probs=75.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 134 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~ 134 (171)
.+++|++.++|+.|+++|++++++||.+. ..+...++.+|+..+|+.+. |..+..++++++.++++++||||+
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~~~~------p~~k~~~~~~l~~~~~~~~~VGD~ 207 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKE-DKVKELSKELNIQEYYSNLS------PEDKVRIIEKLKQNGNKVLMIGDG 207 (263)
Confidence 45899999999999999999999999977 77888999999998887663 233677888899999999999999
Q ss_pred cccccccccCCce
Q psy4436 135 ERNSHDVSPLGVT 147 (171)
Q Consensus 135 ~~di~~a~~~G~~ 147 (171)
.+|+.+++++|+.
T Consensus 208 ~~D~~aa~~Agv~ 220 (263)
T 2yj3_A 208 VNDAAALALADVS 220 (263)
Confidence 9999999999964
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-15 Score=114.05 Aligned_cols=134 Identities=18% Similarity=0.216 Sum_probs=91.8
Q ss_pred CCcEEEEeCCCCCCCceecc----ccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh---HH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYI----DVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LR 86 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~---~~ 86 (171)
.+++||||+||||++...+. ....+|.... ...... ...+++||+.++|+.|++.|++++++||++.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~--~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDA--RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHH--TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHc--CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHH
Confidence 46799999999999865431 1122332221 111111 35688999999999999999999999998642 57
Q ss_pred HHHHHHhcCcccccc-eeeEe--cCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccc-----------------cCCc
Q psy4436 87 AHQLVDLFNWNQHFD-HKEIF--PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS-----------------PLGV 146 (171)
Q Consensus 87 ~~~~l~~~~l~~~fd-~~~~~--~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~-----------------~~G~ 146 (171)
+...|+.+|+..+++ .+... ...|......+.+. | ...+++|||...|+..+. ..|-
T Consensus 135 T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-G--y~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~ 211 (262)
T 3ocu_A 135 TIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQ-G--YEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGK 211 (262)
T ss_dssp HHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHT-T--EEEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTT
T ss_pred HHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhc-C--CCEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCC
Confidence 777999999997663 22111 24456666666554 3 345999999999999843 2566
Q ss_pred eEEEeCC
Q psy4436 147 TCIHVKD 153 (171)
Q Consensus 147 ~~i~v~~ 153 (171)
..|.+++
T Consensus 212 ~~ivlPN 218 (262)
T 3ocu_A 212 TFIMLPN 218 (262)
T ss_dssp TEEECCC
T ss_pred CEEEeCC
Confidence 6777764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.50 E-value=9.4e-14 Score=105.87 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=87.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
.+++.||.|+++.... .....++||+.++|+.|+++|++++++||++. ..+...++.++
T Consensus 143 ~~~i~~~~d~~~~~~~--------------------~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~g 201 (287)
T 3a1c_A 143 KTAVIVARNGRVEGII--------------------AVSDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELN 201 (287)
T ss_dssp CEEEEEEETTEEEEEE--------------------EEECCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHT
T ss_pred CeEEEEEECCEEEEEE--------------------EeccccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhC
Confidence 3577888887763211 12457899999999999999999999999987 77788999999
Q ss_pred cccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 96 WNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 96 l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+..+|+.+ .|.+| ..++++++.. +++++|||+.+|+.+|+++|+. +.+.
T Consensus 202 l~~~f~~i--~~~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~ 250 (287)
T 3a1c_A 202 LDLVIAEV--LPHQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVG 250 (287)
T ss_dssp CSEEECSC--CTTCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEEC
T ss_pred Cceeeeec--ChHHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeC
Confidence 99888765 34444 6678888999 9999999999999999999997 4443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=104.14 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=38.9
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
.+|+..++++++++|++++++++|||+.+|+.+++.+|+ ++.+.+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~-~vam~n 245 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGL-GVAMGN 245 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCC-EEEecC
Confidence 347788999999999999999999999999999999996 444443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.8e-15 Score=109.86 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=90.5
Q ss_pred CcEEEEeCCCCCCCceecc----ccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh---HHH
Q psy4436 16 PKLAVFDLDHTLWPFHVYI----DVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LRA 87 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~---~~~ 87 (171)
.++||||+||||++...+. ....+|.... ..... ....+++||+.++|+.|++.|++++++||++.. ..+
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVD--ARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--TTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHH
T ss_pred CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHH--cCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHH
Confidence 3599999999999865441 1123333222 11111 135689999999999999999999999998642 577
Q ss_pred HHHHHhcCcccccc-eeeEe--cCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccc-----------------cCCce
Q psy4436 88 HQLVDLFNWNQHFD-HKEIF--PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS-----------------PLGVT 147 (171)
Q Consensus 88 ~~~l~~~~l~~~fd-~~~~~--~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~-----------------~~G~~ 147 (171)
...|+.+|+..+++ .+... ...|....+.+.+ .+ .+-+++|||+..|+...- ..|-.
T Consensus 136 ~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~-~g--y~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~ 212 (260)
T 3pct_A 136 VDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVED-MG--YDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKK 212 (260)
T ss_dssp HHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHT-TT--CEEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTT
T ss_pred HHHHHHcCcCccccceeEecCCCCChHHHHHHHHh-cC--CCEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCC
Confidence 77999999987764 22111 2344455555543 23 455999999999999732 26667
Q ss_pred EEEeCC
Q psy4436 148 CIHVKD 153 (171)
Q Consensus 148 ~i~v~~ 153 (171)
.|.+++
T Consensus 213 ~ivlPN 218 (260)
T 3pct_A 213 FIVLPN 218 (260)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 777765
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=96.07 Aligned_cols=84 Identities=11% Similarity=0.029 Sum_probs=59.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCC---ch-hHHHHHHHHh-cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRT---TE-MLRAHQLVDL-FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~---~~-~~~~~~~l~~-~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
..+++||+.++|+.|++. ++++|+||+ ++ .......+.. ++...+|+.+.... +. + .++|
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~--~~--------~----l~~~ 131 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGR--KN--------I----ILAD 131 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSC--GG--------G----BCCS
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCC--cC--------e----eccc
Confidence 568899999999999985 999999998 32 1222334555 46555665542211 11 1 1789
Q ss_pred EEEcCCcccccccccCCceEEEeCCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++|||+..++. .++| .++++.++.
T Consensus 132 l~ieDs~~~i~--~aaG-~~i~~~~~~ 155 (180)
T 3bwv_A 132 YLIDDNPKQLE--IFEG-KSIMFTASH 155 (180)
T ss_dssp EEEESCHHHHH--HCSS-EEEEECCGG
T ss_pred EEecCCcchHH--HhCC-CeEEeCCCc
Confidence 99999999985 4579 999997653
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.44 E-value=6.6e-13 Score=100.89 Aligned_cols=45 Identities=22% Similarity=0.340 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+|+..++.+++.++++++++++|||+.+|+.+++.+|+ ++.+.++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~ 242 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA 242 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC
Confidence 56778899999999999999999999999999999997 5666554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=106.33 Aligned_cols=44 Identities=20% Similarity=0.129 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 82 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~ 82 (171)
+.++++||+|||||+ ...++|++.++|+.|++.|++++++||++
T Consensus 12 ~~~~~l~D~DGvl~~------------------------g~~~~p~a~~~l~~l~~~g~~~~~vTNn~ 55 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFR------------------------GKKPIAGASDALKLLNRNKIPYILLTNGG 55 (352)
T ss_dssp CCEEEEECCBTTTEE------------------------TTEECTTHHHHHHHHHHTTCCEEEECSCC
T ss_pred cCCEEEEECCCeeEc------------------------CCeeCcCHHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999976 33568999999999999999999999975
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4.5e-13 Score=101.15 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=40.8
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.+|+..++++++.++++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~-va~~na 235 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNA 235 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCe-EEeCCc
Confidence 5788999999999999999999999999999999999984 456544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=6.8e-13 Score=99.61 Aligned_cols=46 Identities=9% Similarity=0.169 Sum_probs=39.8
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.+|+..++++++++|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~na 238 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGNA 238 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCCC
Confidence 4677889999999999999999999999999999999954 555443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=96.80 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=37.8
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
.|...++.+++.+|++++++++|||+.+|+.+++.+|+.. .+.+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~v-am~n 226 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGV-AMGN 226 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEE-EETT
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEE-EeCC
Confidence 3556689999999999999999999999999999999854 4544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.36 E-value=7.1e-12 Score=95.32 Aligned_cols=46 Identities=13% Similarity=0.170 Sum_probs=40.3
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|...++.+++.++++++++++|||+.+|+.+++.+|+ ++.+.++.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~ 261 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAR 261 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCC
Confidence 45667899999999999999999999999999999998 67776654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-11 Score=92.92 Aligned_cols=44 Identities=16% Similarity=0.309 Sum_probs=38.5
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+|+..++.+++.++++++++++|||+.+|+.+++.+|+ ++.+.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~-~v~~~n 233 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL-RVAMEN 233 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE-EEECTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCC-EEEecC
Confidence 57788999999999999999999999999999999998 444443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-11 Score=88.91 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=39.2
Q ss_pred CCcHHHHHHHHHHhCCCC--CcEEEEcCCcccccccccCCceEEEeC
Q psy4436 108 GQKTTHFANLKKATGIEY--KDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~--~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
.+|+..++++++++++++ +++++|||+.+|+.+++.+|+. +.+.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~ 220 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVG 220 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeC
Confidence 577899999999999999 9999999999999999999975 4443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-12 Score=95.70 Aligned_cols=45 Identities=11% Similarity=0.232 Sum_probs=40.0
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
++|+..+++++++++++++++++|||+.+|+.+++.+|+. +.+.+
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~n 230 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQ 230 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCce-EEecC
Confidence 6788999999999999999999999999999999999984 44443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.2e-11 Score=87.77 Aligned_cols=46 Identities=9% Similarity=-0.161 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHhCC-CCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~-~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...++++++.+++ +++++++|||+.+|+.+.+.+|.. +.+.++.
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~ 225 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLK 225 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCC
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCC
Confidence 466778889999998 999999999999999999999974 6676654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=4.2e-11 Score=89.12 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=40.1
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
-+|+..++++++.++++++++++|||+.+|+.+++.+|+ ++.+.++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~-~va~~na 206 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNA 206 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCc-EEEEcCC
Confidence 367888999999999999999999999999999999987 4666544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-10 Score=87.61 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=39.8
Q ss_pred CcHHHHHHHHHHhC-CCCCc--EEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATG-IEYKD--MVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~-~~~~~--~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|+..++++++.++ +++++ +++|||+.+|+.+.+.+|. ++.+.++.
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~ 237 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKGLN 237 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCCCC
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCc-eEEecCCC
Confidence 45677888888999 99999 9999999999999999997 47777765
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=89.48 Aligned_cols=46 Identities=20% Similarity=0.206 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|+..++.+++.++++++++++|||+.+|+.+++.+|+. +.+.++.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~ 269 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANAT 269 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCc
Confidence 466778899999999999999999999999999999984 6666543
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.9e-11 Score=87.07 Aligned_cols=120 Identities=9% Similarity=-0.027 Sum_probs=89.0
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
..++++|+|||+||++...... .+-.+...||+.++|+.+. +++.++|.|.+.. ..+..+++.
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~---------------~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~-~ya~~vl~~ 94 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQK---------------HGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYM-MYSDKIAEK 94 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETT---------------TEEEEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHH
T ss_pred CCCeEEEEeccccEEeeecccc---------------CceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcH-HHHHHHHHH
Confidence 3468999999999987554311 1224678999999999999 6799999999987 899999999
Q ss_pred cCcc-cccceee---EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 94 FNWN-QHFDHKE---IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 94 ~~l~-~~fd~~~---~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
++.. .+|+..- .+.. ....|.+-++.+|.+++++++|+|+..........|+.....
T Consensus 95 LDp~~~~f~~rl~R~~c~~-~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~ 155 (204)
T 3qle_A 95 LDPIHAFVSYNLFKEHCVY-KDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPW 155 (204)
T ss_dssp TSTTCSSEEEEECGGGSEE-ETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCC
T ss_pred hCCCCCeEEEEEEecceeE-ECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeE
Confidence 9986 4776541 1110 112255667778999999999999999877666666544444
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=75.23 Aligned_cols=98 Identities=14% Similarity=-0.003 Sum_probs=62.8
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--hHHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE--MLRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~--~~~~~~~l~~ 93 (171)
+|+|+||+||||+++... ...++.|++.++|++|+++|++++++|+++. ...+..+++.
T Consensus 3 ~k~i~~DlDGTL~~~~~~-------------------~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~ 63 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYP-------------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA 63 (142)
T ss_dssp CCEEEECCBTTTBCSCTT-------------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred CeEEEEECcCCCCCCCCc-------------------cccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence 689999999999873211 1123568999999999999999999999862 2445557778
Q ss_pred cCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccc
Q psy4436 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNS 138 (171)
Q Consensus 94 ~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di 138 (171)
+++.. +.+ ....|.... ......-.+..-+||+|+....
T Consensus 64 ~gi~~--~~I-~~n~P~~~~---~~~~~~rK~~~~~fIDDR~~~~ 102 (142)
T 2obb_A 64 RGLEF--YAA-NKDYPEEER---DHQGFSRKLKADLFIDDRNVGG 102 (142)
T ss_dssp TTCCC--SEE-SSSSTTC------CCSCCSSCCCSEEECTTSTTC
T ss_pred cCCCe--EEE-EcCCchhhh---cchhhcCCcCCCEEeeccccCC
Confidence 88763 222 122232100 0001122356788899987643
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.94 E-value=6.7e-10 Score=84.83 Aligned_cols=91 Identities=8% Similarity=-0.044 Sum_probs=64.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-------------eEec------CCcHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-------------EIFP------GQKTTHF 114 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-------------~~~~------~~k~~~~ 114 (171)
..++.||+.++++.|+++|+++.++|+... ..++..++.+++......+ ..+. ..+....
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~-~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEH-HHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 468899999999999999999999999877 8889899999876422111 0111 1222223
Q ss_pred HHHH--HHhCCCCCcEEEEcCCcccccccccCC
Q psy4436 115 ANLK--KATGIEYKDMVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 115 ~~~~--~~~~~~~~~~l~vgD~~~di~~a~~~G 145 (171)
.+.. .++.-+..+++++||+.+|..+++.+.
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~ 250 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 250 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCS
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCcc
Confidence 3222 234446678999999999999977443
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.2e-09 Score=86.65 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=79.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc-C-------------cccccceeeE-ecCCcHHH------
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-N-------------WNQHFDHKEI-FPGQKTTH------ 113 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~-~-------------l~~~fd~~~~-~~~~k~~~------ 113 (171)
+...|++...|++|++.| +++++||++. ..+...++.+ | +.++||.+.. ..||..-.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~-~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr 322 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDY-KYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLR 322 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCH-HHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEE
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCCh-HHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcce
Confidence 445678999999999999 9999999988 7777777776 6 4467887522 22443211
Q ss_pred ----------------------------HHHHHHHhCCCCCcEEEEcCCcc-cccccc-cCCceEEEeCCCC
Q psy4436 114 ----------------------------FANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKDGM 155 (171)
Q Consensus 114 ----------------------------~~~~~~~~~~~~~~~l~vgD~~~-di~~a~-~~G~~~i~v~~g~ 155 (171)
+..+++.+|+++++++||||... ||..++ .+||.+++|....
T Consensus 323 ~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPEL 394 (555)
T 2jc9_A 323 QVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPEL 394 (555)
T ss_dssp EEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTH
T ss_pred EeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEech
Confidence 48888999999999999999999 999997 7999999997754
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-08 Score=75.82 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcC----CcccccccccCCceEEEeCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD----~~~di~~a~~~G~~~i~v~~ 153 (171)
|...++.+ ++++++++++||| +.+|+.+.+.+|...+.+.+
T Consensus 198 Kg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N 242 (262)
T 2fue_A 198 KRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 242 (262)
T ss_dssp TTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred HHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence 33444444 6788999999999 99999999999988888843
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-09 Score=85.50 Aligned_cols=122 Identities=13% Similarity=0.083 Sum_probs=81.8
Q ss_pred CCcEEEEeCCCCCCCceecccc--------CCcceecC---ceeec------cCCCeeeeCCCHHHHHHHHhhCCcEEEE
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDV--------IPPFKKIG---DKVLD------AGGAIIKYYRDVPAILKYLKQNNCLVAA 77 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~--------~~~~~~~~---~~~~~------~~~~~~~~~~~v~~~l~~L~~~g~~i~i 77 (171)
..+++||||||||++....... ..+..... +..+. ...-.+...||+.++|+.+. +++.++|
T Consensus 17 ~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeivI 95 (372)
T 3ef0_A 17 KRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI 95 (372)
T ss_dssp TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEEE
T ss_pred CCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEEE
Confidence 4689999999999987543211 01111000 11111 11224678999999999999 6799999
Q ss_pred EcCCchhHHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHHHHh-CCCCCcEEEEcCCcccc
Q psy4436 78 ASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKAT-GIEYKDMVFFDDEERNS 138 (171)
Q Consensus 78 ~S~~~~~~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~-~~~~~~~l~vgD~~~di 138 (171)
.|.+.. ..+..+++.++... +|+........-+..|.+-++++ +.+++++++|||++...
T Consensus 96 ~Tas~~-~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl~~viiiDd~~~~~ 157 (372)
T 3ef0_A 96 YTMGTK-AYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVW 157 (372)
T ss_dssp ECSSCH-HHHHHHHHHHCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGGG
T ss_pred EeCCcH-HHHHHHHHHhccCCceeeeEEEEecCCCCcceecHHHhcCCCCceEEEEeCCHHHc
Confidence 999988 88999999999887 78743221211112244555655 88999999999999743
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.76 E-value=9.8e-10 Score=85.24 Aligned_cols=94 Identities=12% Similarity=0.067 Sum_probs=60.6
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-ceeeE---------------------ecCCc--
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEI---------------------FPGQK-- 110 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~~~---------------------~~~~k-- 110 (171)
..+.+++.++++.|++ |++++++|+... ..+....+.+++...+ ..... ..++.
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYT-QYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEH-HHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCce-EEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 4678999999999999 999999998764 4445455555552222 11000 00111
Q ss_pred -------------HHHHH----------HHHHHhCCCCCc----EEEEcCCcccccccccC----CceEEEe
Q psy4436 111 -------------TTHFA----------NLKKATGIEYKD----MVFFDDEERNSHDVSPL----GVTCIHV 151 (171)
Q Consensus 111 -------------~~~~~----------~~~~~~~~~~~~----~l~vgD~~~di~~a~~~----G~~~i~v 151 (171)
+..+. +.....++++++ +++|||+.+|+.+++.+ |+. +.+
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~-vam 250 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVA-IAF 250 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEE-EEE
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeE-EEe
Confidence 11122 111112677888 99999999999999999 986 445
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.76 E-value=8.6e-09 Score=69.17 Aligned_cols=51 Identities=20% Similarity=0.027 Sum_probs=39.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
+|+|+||+||||++...... ....+.+++.++|+.|+++|++++++|+++.
T Consensus 1 ik~i~~DlDGTL~~~~~~~~-----------------~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDY-----------------RNVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCG-----------------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCEEEEecCCCCCCCCCCcc-----------------ccCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 47999999999987332100 0124568899999999999999999999865
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.9e-08 Score=76.68 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=82.7
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
.+++|+||||||++..... ........|++.++|+.+.+ +|.++|.|.+.. ..+...++.++
T Consensus 140 k~tLVLDLDeTLvh~~~~~----------------~~~~~~~RP~l~eFL~~l~~-~yeivIfTas~~-~ya~~vld~Ld 201 (320)
T 3shq_A 140 KKLLVLDIDYTLFDHRSPA----------------ETGTELMRPYLHEFLTSAYE-DYDIVIWSATSM-RWIEEKMRLLG 201 (320)
T ss_dssp CEEEEECCBTTTBCSSSCC----------------SSHHHHBCTTHHHHHHHHHH-HEEEEEECSSCH-HHHHHHHHHTT
T ss_pred CcEEEEeccccEEcccccC----------------CCcceEeCCCHHHHHHHHHh-CCEEEEEcCCcH-HHHHHHHHHhC
Confidence 4799999999998754321 11234568999999999995 599999999977 89999999987
Q ss_pred cccccce----e-eE---e---cCCcHHHHHHHHHHh-----CCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 96 WNQHFDH----K-EI---F---PGQKTTHFANLKKAT-----GIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 96 l~~~fd~----~-~~---~---~~~k~~~~~~~~~~~-----~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
....+.+ + +. + .+..+..|.+-++.+ |.+++++++|||++.........|+....+
T Consensus 202 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~ 273 (320)
T 3shq_A 202 VASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPF 273 (320)
T ss_dssp CTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCC
T ss_pred CCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCeE
Confidence 6654311 1 00 0 111111244455555 889999999999999887766666554433
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=79.12 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=70.2
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+..+|... .|..|....+.+.+ . +++++|||+.
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~~~--~P~~K~~~v~~l~~----~-~~v~~vGDg~ 528 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAEV--LPHQKSEEVKKLQA----K-EVVAFVGDGI 528 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECSC--CTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEEeC--CHHhHHHHHHHHhh----C-CeEEEEeCCH
Confidence 4789999999999999999999999987 8888899999998666443 56667766666543 3 8999999999
Q ss_pred ccccccccCCce
Q psy4436 136 RNSHDVSPLGVT 147 (171)
Q Consensus 136 ~di~~a~~~G~~ 147 (171)
+|+.+.+.+|+.
T Consensus 529 ND~~al~~A~vg 540 (645)
T 3j08_A 529 NDAPALAQADLG 540 (645)
T ss_dssp SCHHHHHHSSEE
T ss_pred hHHHHHHhCCEE
Confidence 999999999953
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.4e-07 Score=70.25 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=39.3
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~ 84 (171)
++|+|+||+||||++.. ..+.+...++|++|+++|++++++|+++..
T Consensus 3 ~~kli~~DlDGTLl~~~-----------------------~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~ 49 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPPR-----------------------LCQTDEMRALIKRARGAGFCVGTVGGSDFA 49 (246)
T ss_dssp CSEEEEECSBTTTBSTT-----------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred CceEEEEeCcCCcCCCC-----------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence 37999999999997622 134577899999999999999999999873
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.39 E-value=2.3e-07 Score=68.59 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=43.3
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
+|+|+||+||||++..... ....+.+...++|++|+++| +++++|+++. ..+...++.+
T Consensus 1 ikli~~DlDGTLl~~~~~~------------------~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~-~~~~~~~~~l 59 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP------------------EESYADAGLLSLISDLKERF-DTYIVTGRSP-EEISRFLPLD 59 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG------------------GGCCCCHHHHHHHHHHHHHS-EEEEECSSCH-HHHHHHSCSS
T ss_pred CeEEEEecCCCCcCCCCCc------------------ccCCCCHHHHHHHHHHhcCC-CEEEEeCCCH-HHHHHHhccc
Confidence 4789999999998732110 01234577899999999999 9999999987 5566565544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.39 E-value=7.1e-07 Score=76.00 Aligned_cols=87 Identities=15% Similarity=0.176 Sum_probs=70.8
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+..+|... .|..|....+.+.+ . +++++|||+.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~~~--~P~~K~~~v~~l~~----~-~~v~~vGDg~ 606 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIAEV--LPHQKSEEVKKLQA----K-EVVAFVGDGI 606 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEECSC--CTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCcEEEccC--CHHHHHHHHHHHhc----C-CeEEEEECCh
Confidence 4689999999999999999999999987 8888899999988655433 56667766666543 3 8899999999
Q ss_pred ccccccccCCceEEEe
Q psy4436 136 RNSHDVSPLGVTCIHV 151 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v 151 (171)
+|+.+.+.+|+. +.+
T Consensus 607 ND~~al~~A~vg-iam 621 (723)
T 3j09_A 607 NDAPALAQADLG-IAV 621 (723)
T ss_dssp TTHHHHHHSSEE-EEC
T ss_pred hhHHHHhhCCEE-EEe
Confidence 999999999853 444
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=9.8e-07 Score=68.39 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=34.4
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
.++|++.++++.|+++|++++|+|.++. ..++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~-~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHE-ELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhhc
Confidence 5799999999999999999999999988 8888787763
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.32 E-value=2.7e-06 Score=68.64 Aligned_cols=101 Identities=10% Similarity=0.136 Sum_probs=75.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc---------CcccccceeeEe-cCCc--------------
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---------NWNQHFDHKEIF-PGQK-------------- 110 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~---------~l~~~fd~~~~~-~~~k-------------- 110 (171)
+...|.+...|++|+++|.++.++||++. +.+...+..+ .+.++||.+... .||.
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~ 263 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE 263 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCc-hHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECC
Confidence 44567889999999999999999999988 7777666653 466788876221 1221
Q ss_pred -----------------HHHHHHHHHHhCCCCCcEEEEcCCcc-ccccccc-CCceEEEeCCCCc
Q psy4436 111 -----------------TTHFANLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKDGMS 156 (171)
Q Consensus 111 -----------------~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~-~G~~~i~v~~g~~ 156 (171)
......+.+.+|..-.+++||||+.. |+..+++ .||.+++|-....
T Consensus 264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL~ 328 (470)
T 4g63_A 264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELG 328 (470)
T ss_dssp TCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTHH
T ss_pred CCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHHH
Confidence 12245666778999999999999999 8766665 8999999977653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.6e-06 Score=73.84 Aligned_cols=92 Identities=12% Similarity=0.154 Sum_probs=71.3
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCc
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 135 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~ 135 (171)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+..+|... .|..|.+..+.+.+ ..+.++||||+.
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~-~~a~~ia~~lgi~~v~a~~--~P~~K~~~v~~l~~----~g~~V~~vGDG~ 626 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSK-RTAEAVAGTLGIKKVVAEI--MPEDKSRIVSELKD----KGLIVAMAGDGV 626 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHHHTCCCEECSC--CHHHHHHHHHHHHH----HSCCEEEEECSS
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCEEEEec--CHHHHHHHHHHHHh----cCCEEEEEECCh
Confidence 5689999999999999999999999987 7888899999988655433 33445555555443 467899999999
Q ss_pred ccccccccCCceEEEeCCCC
Q psy4436 136 RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 136 ~di~~a~~~G~~~i~v~~g~ 155 (171)
||+.+.+.+|+ ++.+..|.
T Consensus 627 ND~paL~~Adv-GIAmg~g~ 645 (736)
T 3rfu_A 627 NDAPALAKADI-GIAMGTGT 645 (736)
T ss_dssp TTHHHHHHSSE-EEEESSSC
T ss_pred HhHHHHHhCCE-EEEeCCcc
Confidence 99999999995 34444443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.6e-06 Score=64.10 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=37.2
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
.+|+|+||+||||++.. ..+.+...++|++|+++ ++++++|+++.
T Consensus 5 ~~kli~~DlDGTLl~~~-----------------------~~i~~~~~~al~~l~~~-i~v~iaTGR~~ 49 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPR-----------------------QKITKEMDDFLQKLRQK-IKIGVVGGSDF 49 (246)
T ss_dssp CSEEEEEESBTTTBCTT-----------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred CceEEEEECCCCcCCCC-----------------------cccCHHHHHHHHHHHhC-CeEEEEcCCCH
Confidence 37899999999997621 12356789999999999 99999999976
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.6e-06 Score=67.42 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=78.2
Q ss_pred CCcEEEEeCCCCCCCceeccccC-------Cc-ceecC---ceeecc------CCCeeeeCCCHHHHHHHHhhCCcEEEE
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVI-------PP-FKKIG---DKVLDA------GGAIIKYYRDVPAILKYLKQNNCLVAA 77 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~-------~~-~~~~~---~~~~~~------~~~~~~~~~~v~~~l~~L~~~g~~i~i 77 (171)
....+|+|||.||++.......+ .| +.... ...... ..-.+...||+.++|+.+. ++|.++|
T Consensus 25 ~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls-~~yEivI 103 (442)
T 3ef1_A 25 KRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI 103 (442)
T ss_dssp TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT-TTEEEEE
T ss_pred CCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh-CCcEEEE
Confidence 45689999999999765543221 01 11000 111110 1124677999999999999 5699999
Q ss_pred EcCCchhHHHHHHHHhcCccc-ccceeeEecCCcHHHHHHHHHHh-CCCCCcEEEEcCCccc
Q psy4436 78 ASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPGQKTTHFANLKKAT-GIEYKDMVFFDDEERN 137 (171)
Q Consensus 78 ~S~~~~~~~~~~~l~~~~l~~-~fd~~~~~~~~k~~~~~~~~~~~-~~~~~~~l~vgD~~~d 137 (171)
.|.+.. ..+..+++.++... +|.........-...|.+-++++ +.+.+.+++|||++.-
T Consensus 104 fTas~~-~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~rdl~~vvIIDd~p~~ 164 (442)
T 3ef1_A 104 YTMGTK-AYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDV 164 (442)
T ss_dssp ECSSCH-HHHHHHHHHHCTTSTTTTTCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred EcCCCH-HHHHHHHHHhccCCccccceEEEecCCCCceeeehHHhcCCCcceEEEEECCHHH
Confidence 999987 89999999998876 67653221111111133334433 8889999999999863
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.7e-06 Score=67.33 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=64.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc------c--------cee-eE-e----c----CC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH------F--------DHK-EI-F----P----GQ 109 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~------f--------d~~-~~-~----~----~~ 109 (171)
.+.++|++.++++.|+++|++++|+|++.. .+++.+.+.+|+..- + +.. .. . + ..
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~-~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~g 297 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFI-DIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREG 297 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHH
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCc
Confidence 456899999999999999999999999988 889989998875321 1 111 00 1 1 12
Q ss_pred cHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCC
Q psy4436 110 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 110 k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G 145 (171)
|+..++.+++. ......++++||+.+|+.+.+..+
T Consensus 298 K~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 298 KVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred hHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 45555555432 245667999999999999988743
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.89 E-value=3.5e-05 Score=67.81 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=69.6
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccce---------------------------e--eE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH---------------------------K--EI 105 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~---------------------------~--~~ 105 (171)
-++.|++.++++.|+++|+++.++|+... ..+....+.+|+...... + ..
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~-~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 35689999999999999999999999977 888889999998653211 0 11
Q ss_pred ecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 106 FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 106 ~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|..|....+.+.+ ..+.++++||+.+|+.+.+++++. +.+..|.
T Consensus 681 ~P~~K~~~v~~l~~----~g~~v~~~GDG~ND~~alk~Advg-iamg~g~ 725 (995)
T 3ar4_A 681 EPSHKSKIVEYLQS----YDEITAMTGDGVNDAPALKKAEIG-IAMGSGT 725 (995)
T ss_dssp CSSHHHHHHHHHHT----TTCCEEEEECSGGGHHHHHHSTEE-EEETTSC
T ss_pred CHHHHHHHHHHHHH----CCCEEEEEcCCchhHHHHHHCCeE-EEeCCCC
Confidence 13444444444433 357899999999999999999974 3344443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00027 Score=62.44 Aligned_cols=94 Identities=7% Similarity=-0.032 Sum_probs=65.1
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc------------------------cee-------
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF------------------------DHK------- 103 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f------------------------d~~------- 103 (171)
-++.|++.++|+.|+++|+++.++|+.+. ..+....+.+|+...- ..+
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 35789999999999999999999999977 7788888899886310 000
Q ss_pred ----------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 104 ----------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 104 ----------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
..+....|+.-..+.+.++-..+.++++||+.||+.+.+++++...
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIA 738 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 738 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEE
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEE
Confidence 0222222322222222222223679999999999999999996443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=9.1e-05 Score=64.59 Aligned_cols=95 Identities=12% Similarity=0.042 Sum_probs=69.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-c--------------------------eeeEec
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-D--------------------------HKEIFP 107 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d--------------------------~~~~~~ 107 (171)
-++.|++.++++.|++.|+++.++|+-.. ..+....+.+|+.... + +....|
T Consensus 534 Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~-~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P 612 (920)
T 1mhs_A 534 DPPRHDTYKTVCEAKTLGLSIKMLTGDAV-GIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP 612 (920)
T ss_dssp CCCCHHHHHHHHHHHHHTCEEEEEESSCH-HHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS
T ss_pred ccccccHHHHHHHHhhcCceEEEEcCCCH-HHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH
Confidence 35788999999999999999999999876 8888899999986311 0 012234
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
..|....+.+.+ . -+.+.++||+.||..+.+++++. +.+..|.
T Consensus 613 ~~K~~iV~~Lq~-~---g~~Vam~GDGvNDapaLk~AdvG-IAmg~gt 655 (920)
T 1mhs_A 613 QHKYNVVEILQQ-R---GYLVAMTGDGVNDAPSLKKADTG-IAVEGSS 655 (920)
T ss_dssp THHHHHHHHHHT-T---TCCCEECCCCGGGHHHHHHSSEE-EEETTSC
T ss_pred HHHHHHHHHHHh-C---CCeEEEEcCCcccHHHHHhCCcC-ccccccc
Confidence 445555555543 2 37899999999999999998864 4444443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00073 Score=59.75 Aligned_cols=92 Identities=8% Similarity=-0.034 Sum_probs=62.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc------------------------ee-------
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD------------------------HK------- 103 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd------------------------~~------- 103 (171)
-++.|++.++|++|+++|+++.++|+.+. ..+....+.+|+...-. ..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~-~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHP-ITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 35788999999999999999999999977 77888888888842100 00
Q ss_pred ----------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 104 ----------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 104 ----------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
..+..-.|+.-..+.+.++-....++++||+.||+.+.+.+|+.
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vG 741 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCee
Confidence 01111122222223333332345699999999999999999863
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0038 Score=46.09 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=67.0
Q ss_pred CcEEEEEcCCch-hHHHHHHHHhcCcccccceeeEec---CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 72 NCLVAAASRTTE-MLRAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 72 g~~i~i~S~~~~-~~~~~~~l~~~~l~~~fd~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
+..-+++|+... |..+ .+=-+++..+|..-.+++ -.|...|+++.+++| +.-.-++|||+.....+|++.+|+
T Consensus 176 ~~vNVLVTs~qLVPaLa--K~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~P 252 (274)
T 3geb_A 176 NCVNVLVTTTQLIPALA--KVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMP 252 (274)
T ss_dssp TEEEEEEESSCHHHHHH--HHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCC
T ss_pred ceeEEEEecCchHHHHH--HHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCC
Confidence 455566666543 2222 333467778887765555 367799999999998 346677899999999999999999
Q ss_pred EEEeCCCCcHHHHHHHHH
Q psy4436 148 CIHVKDGMSHSVLHKGLK 165 (171)
Q Consensus 148 ~i~v~~g~~~~~~~~~~~ 165 (171)
++-+........+..+|+
T Consensus 253 FwrI~~h~Dl~~l~~al~ 270 (274)
T 3geb_A 253 FWRISCHADLEALRHALE 270 (274)
T ss_dssp EEECCSHHHHHHHHHHHH
T ss_pred eEEeecCccHHHHHHhhc
Confidence 999987666666666654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00016 Score=62.91 Aligned_cols=87 Identities=8% Similarity=0.059 Sum_probs=64.2
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc---------------c-----c--------eeeEec
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH---------------F-----D--------HKEIFP 107 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~---------------f-----d--------~~~~~~ 107 (171)
++.|++.++++.|++.|+++.++|+-.. ..+....+.+|+... + + +....|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~-~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCH-HHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCCh-HHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 5678999999999999999999999876 888888999998431 0 0 001123
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
..|....+.+.+ . .+.+.++||+.||..+.+++++.
T Consensus 567 ~~K~~iV~~lq~-~---g~~Vam~GDGvNDapaLk~AdvG 602 (885)
T 3b8c_A 567 EHKYEIVKKLQE-R---KHIVGMTGDGVNDAPALKKADIG 602 (885)
T ss_dssp HHHHHHHHHHHH-T---TCCCCBCCCSSTTHHHHHHSSSC
T ss_pred HHHHHHHHHHHH-C---CCeEEEEcCCchhHHHHHhCCEe
Confidence 334555555543 2 36899999999999999988753
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00077 Score=50.11 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=15.0
Q ss_pred CCcEEEEeCCCCCCCce
Q psy4436 15 FPKLAVFDLDHTLWPFH 31 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~ 31 (171)
++|+|+||+||||++.+
T Consensus 9 ~ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 9 EVTVILLDIEGTTTPIA 25 (261)
T ss_dssp TCCEEEECCBTTTBCHH
T ss_pred CCCEEEEecCCCccchh
Confidence 48999999999999864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0042 Score=46.64 Aligned_cols=17 Identities=24% Similarity=0.090 Sum_probs=14.9
Q ss_pred CcEEEEeCCCCCCCcee
Q psy4436 16 PKLAVFDLDHTLWPFHV 32 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~ 32 (171)
+++|+||+||||+++..
T Consensus 32 i~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CCEEEEECCCCCBCSCC
T ss_pred CCEEEEeCCCCCcCCCE
Confidence 68999999999998654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.0092 Score=43.58 Aligned_cols=48 Identities=19% Similarity=0.289 Sum_probs=37.2
Q ss_pred eEec--CCcHHHHHHHHHHhCCCCCcEEEEcC----CcccccccccCCceEEEeCCC
Q psy4436 104 EIFP--GQKTTHFANLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 104 ~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD----~~~di~~a~~~G~~~i~v~~g 154 (171)
++.+ -.|...++.+ ++++++++++||| +.+|+.+.+.+|..++.+.++
T Consensus 181 eI~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na 234 (246)
T 2amy_A 181 DVFPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 234 (246)
T ss_dssp EEEETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred EEecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC
Confidence 4444 3566667777 8999999999999 999999999999878888654
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=92.99 E-value=0.26 Score=35.86 Aligned_cols=85 Identities=8% Similarity=-0.042 Sum_probs=51.9
Q ss_pred HHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccc
Q psy4436 61 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHD 140 (171)
Q Consensus 61 v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~ 140 (171)
+..+|+.+++.+-++++++..+.......+.+-+++. +..+.-...+-.+..++++.-.. --++|||..- +..
T Consensus 95 il~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~-----i~~~~~~~~ee~~~~i~~l~~~G-~~vVVG~~~~-~~~ 167 (225)
T 2pju_A 95 VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR-----LDQRSYITEEDARGQINELKANG-TEAVVGAGLI-TDL 167 (225)
T ss_dssp HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC-----EEEEEESSHHHHHHHHHHHHHTT-CCEEEESHHH-HHH
T ss_pred HHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc-----eEEEEeCCHHHHHHHHHHHHHCC-CCEEECCHHH-HHH
Confidence 4445555555667899998765545566566667765 22222222323344443332221 2358998777 788
Q ss_pred cccCCceEEEeC
Q psy4436 141 VSPLGVTCIHVK 152 (171)
Q Consensus 141 a~~~G~~~i~v~ 152 (171)
|++.|++++.+.
T Consensus 168 A~~~Gl~~vlI~ 179 (225)
T 2pju_A 168 AEEAGMTGIFIY 179 (225)
T ss_dssp HHHTTSEEEESS
T ss_pred HHHcCCcEEEEC
Confidence 999999999998
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=92.63 E-value=0.38 Score=34.10 Aligned_cols=99 Identities=10% Similarity=0.143 Sum_probs=58.3
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 60 DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 60 ~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
++..+|+.+++.+-++++++..+.......+.+-+++. +......+....+..-+-+++-|++ ++|||..- +.
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~i~~l~~~G~~----vvVG~~~~-~~ 154 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKEFLFSSEDEITTLISKVKTENIK----IVVSGKTV-TD 154 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEEEEECSGGGHHHHHHHHHHTTCC----EEEECHHH-HH
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCe----EEECCHHH-HH
Confidence 45566666677778999998655544455555666655 2111111112222233333344543 58998777 78
Q ss_pred ccccCCceEEEeCCCCc--HHHHHHHHH
Q psy4436 140 DVSPLGVTCIHVKDGMS--HSVLHKGLK 165 (171)
Q Consensus 140 ~a~~~G~~~i~v~~g~~--~~~~~~~~~ 165 (171)
.|++.|++++.+..|.. ...++++++
T Consensus 155 ~A~~~Gl~~vli~sg~eSI~~Ai~eA~~ 182 (196)
T 2q5c_A 155 EAIKQGLYGETINSGEESLRRAIEEALN 182 (196)
T ss_dssp HHHHTTCEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEecCHHHHHHHHHHHHH
Confidence 89999999999987653 333444433
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=91.47 E-value=0.049 Score=39.96 Aligned_cols=47 Identities=17% Similarity=0.306 Sum_probs=37.5
Q ss_pred eEec--CCcHHHHHHHHHHhCCCCCcEEEEcCC----cccccccccCCceEEEeCCC
Q psy4436 104 EIFP--GQKTTHFANLKKATGIEYKDMVFFDDE----ERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 104 ~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~----~~di~~a~~~G~~~i~v~~g 154 (171)
++.+ -.|...++++++ +++++++|||+ .+|+.+.+.+|...+.+.+.
T Consensus 180 eI~~~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~ 232 (246)
T 3f9r_A 180 DVFPVGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSY 232 (246)
T ss_dssp EEEETTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSH
T ss_pred EEEeCCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCH
Confidence 4444 356666777776 89999999996 99999999999888888653
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=90.74 E-value=0.1 Score=37.85 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=35.3
Q ss_pred eEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccC--CceEEEeCC
Q psy4436 104 EIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL--GVTCIHVKD 153 (171)
Q Consensus 104 ~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~--G~~~i~v~~ 153 (171)
+..| -.|...++++++.++ +++|||+.+|+.+.+.+ |. ++.+.+
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~-~vam~N 200 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDAL-TIKVGE 200 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSE-EEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCc-EEEECC
Confidence 5555 368888999999887 99999999999999998 85 455533
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=88.89 E-value=0.13 Score=40.45 Aligned_cols=13 Identities=46% Similarity=0.516 Sum_probs=11.7
Q ss_pred cEEEEeCCCCCCC
Q psy4436 17 KLAVFDLDHTLWP 29 (171)
Q Consensus 17 k~vvfDlDgTL~~ 29 (171)
+.+|||+|||||.
T Consensus 41 ~~AVFD~DgTl~~ 53 (385)
T 4gxt_A 41 PFAVFDWDNTSII 53 (385)
T ss_dssp EEEEECCTTTTEE
T ss_pred CEEEEcCCCCeec
Confidence 5899999999994
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=86.56 E-value=0.24 Score=38.97 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=13.0
Q ss_pred CcEEEEeCCCCCCCc
Q psy4436 16 PKLAVFDLDHTLWPF 30 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~ 30 (171)
+|.|+||+||+++..
T Consensus 1 ~~~~~fdvdgv~~~~ 15 (384)
T 1qyi_A 1 MKKILFDVDGVFLSE 15 (384)
T ss_dssp CCEEEECSBTTTBCS
T ss_pred CceEEEecCceeech
Confidence 478999999999864
|
| >2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} | Back alignment and structure |
|---|
Probab=83.93 E-value=3.3 Score=26.71 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=32.7
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEec
Q psy4436 60 DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP 107 (171)
Q Consensus 60 ~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~ 107 (171)
....+.+.+++.|.++.++.-++. ++..++..|+...|.....++
T Consensus 68 ~L~~~~~~~~~~g~~l~l~~~~~~---v~~~l~~~gl~~~~~~~~i~~ 112 (130)
T 2kln_A 68 ALDQLRTELLRRGIVFAMARVKQD---LRESLRAASLLDKIGEDHIFM 112 (130)
T ss_dssp HHHHHHHHHHTTTEEEEEECCSSH---HHHHHHHCTTHHHHCTTEEES
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHcCChhhcCcceeEC
Confidence 356778889999999998877644 566899999887664433444
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=81.48 E-value=2.6 Score=31.57 Aligned_cols=58 Identities=7% Similarity=-0.035 Sum_probs=43.1
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
+.|.+|.=+.|+++.. +.+.+.+-|..|++.|++++++++... . ....++++
T Consensus 35 m~k~iVIKiGGs~l~~--------------------------~~~~l~~dIa~L~~~G~~vVlVhgGg~-~-i~~~l~~l 86 (279)
T 3l86_A 35 MKDIIVIKIGGVASQQ--------------------------LSGDFLSQIKNWQDAGKQLVIVHGGGF-A-INKLMEEN 86 (279)
T ss_dssp CCCEEEEEECTTGGGS--------------------------CCHHHHHHHHHHHHTTCEEEEEECCHH-H-HHHHHHHT
T ss_pred CCceEEEEEChHHHHh--------------------------HHHHHHHHHHHHHhCCCcEEEEECCHH-H-HHHHHHHc
Confidence 3368888888887531 135567788899999999999998732 4 44589999
Q ss_pred Cccccc
Q psy4436 95 NWNQHF 100 (171)
Q Consensus 95 ~l~~~f 100 (171)
++..-|
T Consensus 87 g~~~~~ 92 (279)
T 3l86_A 87 QVPVKK 92 (279)
T ss_dssp TCCCCE
T ss_pred CCCCcc
Confidence 988665
|
| >3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=81.41 E-value=7.9 Score=24.43 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=49.0
Q ss_pred HHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---EecCCcH-HHHHHHHHHhCCCCCcEEEEcCCcc--cc
Q psy4436 65 LKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---IFPGQKT-THFANLKKATGIEYKDMVFFDDEER--NS 138 (171)
Q Consensus 65 l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---~~~~~k~-~~~~~~~~~~~~~~~~~l~vgD~~~--di 138 (171)
-+.|.+.|+.+..+++.. + +...++... ++.+. ..+.... +..+.+.+....+.-.++++.+... ..
T Consensus 23 ~~~l~~~g~~v~~~~~~~--~-a~~~l~~~~----~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~ 95 (140)
T 3grc_A 23 NLMLEKGGFDSDMVHSAA--Q-ALEQVARRP----YAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGEL 95 (140)
T ss_dssp HHHHHHTTCEEEEECSHH--H-HHHHHHHSC----CSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHH
T ss_pred HHHHHHCCCeEEEECCHH--H-HHHHHHhCC----CCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHH
Confidence 345667899987777642 3 333555544 33331 1233333 3333332211122335777776655 33
Q ss_pred c-ccccCCceEEEeCCCCcHHHHHHHHHH
Q psy4436 139 H-DVSPLGVTCIHVKDGMSHSVLHKGLKQ 166 (171)
Q Consensus 139 ~-~a~~~G~~~i~v~~g~~~~~~~~~~~~ 166 (171)
. .+.++|+..+.... .+.+++...+++
T Consensus 96 ~~~~~~~g~~~~l~kP-~~~~~l~~~i~~ 123 (140)
T 3grc_A 96 EFNSQPLAVSTWLEKP-IDENLLILSLHR 123 (140)
T ss_dssp HHCCTTTCCCEEECSS-CCHHHHHHHHHH
T ss_pred HHHhhhcCCCEEEeCC-CCHHHHHHHHHH
Confidence 4 67888988887765 445555544443
|
| >4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* | Back alignment and structure |
|---|
Probab=80.56 E-value=3.3 Score=26.72 Aligned_cols=38 Identities=5% Similarity=0.035 Sum_probs=28.2
Q ss_pred HHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc
Q psy4436 61 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD 101 (171)
Q Consensus 61 v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd 101 (171)
...+.+.+++.|.++.++.-++. ....++..|+...+.
T Consensus 70 L~~~~~~~~~~g~~l~l~~~~~~---v~~~l~~~gl~~~~~ 107 (130)
T 4dgh_A 70 LEEMIQSFHKRGIKVLISGANSR---VSQKLVKAGIVKLVG 107 (130)
T ss_dssp HHHHHHHHHTTTCEEEEECCCHH---HHHHHHHTTHHHHHC
T ss_pred HHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHcCChhhcC
Confidence 44567888889999998876533 556889988876654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 171 | ||||
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 3e-29 |
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 103 bits (258), Expect = 3e-29
Identities = 81/158 (51%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQNN 72
+ PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP +L L+
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG 62
Query: 73 CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 132
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L TG+ + MVFFD
Sbjct: 63 VPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFD 122
Query: 133 DEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170
DE RN DV LGVTCIH++DGMS L +GL+ +A
Sbjct: 123 DENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKA 160
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 171 | |||
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 100.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.92 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.92 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.92 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.91 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.91 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.9 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.9 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.89 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.89 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.89 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.88 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.88 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.88 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.88 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.88 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.87 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.87 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.85 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.85 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.83 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.82 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.81 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.8 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.77 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.76 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.71 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.69 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.63 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.62 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.61 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.57 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.56 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.54 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.53 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.52 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.51 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.5 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.49 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.48 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.45 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.35 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.31 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.29 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.29 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.18 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.15 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.96 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 98.88 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.66 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 98.64 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.62 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.52 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.28 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.09 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 92.34 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 86.98 | |
| d2ayxa1 | 133 | Sensor kinase protein RcsC, C-terminal domain {Esc | 86.81 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 81.65 | |
| d1ys7a2 | 121 | Transcriptional regulatory protein PrrA, N-termina | 81.29 |
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.2e-38 Score=223.05 Aligned_cols=159 Identities=50% Similarity=0.842 Sum_probs=148.4
Q ss_pred cccCCcEEEEeCCCCCCCceeccccCCcceecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHH
Q psy4436 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 90 (171)
Q Consensus 12 ~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~ 90 (171)
|++.||+||||||||||+.+.+.+...+++... ..+.+.....+.++||+.++|+.|+++|++++|+||++.+...+..
T Consensus 1 m~~~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~ 80 (164)
T d1u7pa_ 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQL 80 (164)
T ss_dssp CCCCCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHH
T ss_pred CCCCCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccc
Confidence 677899999999999999999999888888887 7888888899999999999999999999999999998776777878
Q ss_pred HHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCCcHHHHHHHHHHhhhc
Q psy4436 91 VDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWASK 170 (171)
Q Consensus 91 l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~~~~~~~~~~~ 170 (171)
++.+++..+|..+....+|++..|..+++++|++|++++||||+..|+.+|+++|+.+++|.+|++.+++++++++|++.
T Consensus 81 l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~~~ 160 (164)
T d1u7pa_ 81 LELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKA 160 (164)
T ss_dssp HHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred hhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 89999999998887788999999999999999999999999999999999999999999999999999999999999863
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=8.7e-26 Score=163.71 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=92.4
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|+++|++++|+||++. ..+...++.+++..+|+.+.. .+||+|.+|+.++++++++|+++
T Consensus 86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~ 164 (218)
T d1te2a_ 86 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 164 (218)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccchHHHHHHHhhhccccccccccccc-cccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhc
Confidence 345789999999999999999999999988 778889999999999998733 34888999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+||||+..|+.+|+++|+.++++.++..
T Consensus 165 l~igD~~~di~aA~~~G~~~i~v~~~~~ 192 (218)
T d1te2a_ 165 VALEDSVNGMIASKAARMRSIVVPAPEA 192 (218)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred EEEeeCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999977543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.92 E-value=3.4e-26 Score=166.00 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=93.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++|++.++|+.|++.|++++++||++. ..+...++++|+..+|+.+.. ..||+|+.|..++++++++|++
T Consensus 92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~ 170 (224)
T d2hsza1 92 NISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ 170 (224)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cccchHHHHHHHHHHHhccCCcccccccccH-HHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhc
Confidence 4667899999999999999999999999988 778889999999999987622 2388899999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
++||||+..|+.+|+++|+.++++.+|+.
T Consensus 171 ~~~igD~~~Di~~A~~aG~~~i~v~~g~~ 199 (224)
T d2hsza1 171 ILFVGDSQNDIFAAHSAGCAVVGLTYGYN 199 (224)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred cchhcCcHHHHHHHHHcCCeEEEEeCCCC
Confidence 99999999999999999999999988764
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=3.8e-26 Score=164.27 Aligned_cols=102 Identities=7% Similarity=0.070 Sum_probs=90.8
Q ss_pred CCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee-----EecCCcHHHHHHHHHHhCCCCC
Q psy4436 52 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 52 ~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
.....++||+.++|+.|+++|++++|+||++. .. ...++++|+..||+.+. ..+||++++|+.++++++++|+
T Consensus 78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~-~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NA-FTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HH-HHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCcccchHHhhhhcccccccchhhhcccch-hh-hhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 34578899999999999999999999999866 44 45899999999998772 2458999999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|+||||+..|+.+|+++|+.++++.++.
T Consensus 156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 156 NTYYIGDRTLDVEFAQNSGIQSINFLEST 184 (204)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence 99999999999999999999999997653
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.91 E-value=3.2e-26 Score=165.16 Aligned_cols=106 Identities=8% Similarity=0.067 Sum_probs=94.0
Q ss_pred cCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCC
Q psy4436 50 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 50 ~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~ 124 (171)
......+++||+.++|+.|++ +++++|+||++. ..+...++++++..+|+.+.. .+||+|.+|+++++++|++
T Consensus 76 ~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~ 153 (207)
T d2hdoa1 76 SHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRR-NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 153 (207)
T ss_dssp TCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCH-HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred ccccccccccchhhhhhhhcc-cccccccccccc-cccccccccccccccccccccccccccchhhhhhhcccccceeee
Confidence 334567899999999999985 699999999987 778889999999999988732 3489999999999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEeCCCCcH
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
|++++||||+..|+.+|+++|+.++++.+|...
T Consensus 154 ~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~ 186 (207)
T d2hdoa1 154 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDP 186 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCT
T ss_pred ccceeEecCCHHHHHHHHHcCCeEEEEecCCCC
Confidence 999999999999999999999999999887653
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.91 E-value=1.9e-25 Score=161.03 Aligned_cols=103 Identities=9% Similarity=0.114 Sum_probs=92.7
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE---ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI---FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~---~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
...+++|++.++|+.|+.+ ++++++||++. ...+..++++++..+|+.+.. ..+|+|.++++++++++++|++++
T Consensus 81 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v 158 (210)
T d2ah5a1 81 YEAQLFPQIIDLLEELSSS-YPLYITTTKDT-STAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAI 158 (210)
T ss_dssp GSCEECTTHHHHHHHHHTT-SCEEEEEEEEH-HHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred hcccchhHHHHHHhhhhcc-cchhhcccccc-hhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccce
Confidence 4578899999999999977 58999999988 888889999999999998732 358899999999999999999999
Q ss_pred EEcCCcccccccccCCceEEEeCCCCcH
Q psy4436 130 FFDDEERNSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 130 ~vgD~~~di~~a~~~G~~~i~v~~g~~~ 157 (171)
||||+.+|+.+|+++|+++++|.+|...
T Consensus 159 ~VGDs~~Di~aa~~aGi~~i~v~~g~~~ 186 (210)
T d2ah5a1 159 IIGDTKFDMLGARETGIQKLAITWGFGE 186 (210)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSSC
T ss_pred eecCCHHHHHHHHHcCCeEEEEcCCCCC
Confidence 9999999999999999999999988753
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.90 E-value=4e-25 Score=164.09 Aligned_cols=101 Identities=10% Similarity=0.010 Sum_probs=89.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccc-cee---e--EecCCcHHHHHHHHHHhCCC-CC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHK---E--IFPGQKTTHFANLKKATGIE-YK 126 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~f-d~~---~--~~~~~k~~~~~~~~~~~~~~-~~ 126 (171)
...++||+.++|+.|+++|++++|+||++. ......++.+++..+| +.+ + ..+||.|.+|.++++++++. ++
T Consensus 97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~-~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~ 175 (257)
T d1swva_ 97 YASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN 175 (257)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred cCccCCcHHHHHHHHHhcccceeecCCCch-hhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcc
Confidence 457899999999999999999999999988 7788899999999887 544 1 23488899999999999995 58
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+|+||||+..|+.+|+++|+.+|+|.+|.
T Consensus 176 ~~v~VgDs~~Di~aA~~aG~~ti~v~~G~ 204 (257)
T d1swva_ 176 HMIKVGDTVSDMKEGRNAGMWTVGVILGS 204 (257)
T ss_dssp GEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred eEEEEeCChhhHHHHHHCCCEEEEEccCC
Confidence 99999999999999999999999998875
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.90 E-value=1.1e-24 Score=158.06 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=87.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-----eEecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-----EIFPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-----~~~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++||+.++|+.|++.|++++++||+.. ....++..++..+|+.+ ...+||+|++|+++++++|++|++|
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~ 165 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN---GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cccccCCceeccccccccccceEEEeecch---hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceE
Confidence 467899999999999999999999999855 45689999999999876 2235899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+||||+..|+.+|+++|+++++|.+
T Consensus 166 l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 166 IGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EEEecCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999976
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2e-24 Score=158.27 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=88.9
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----e--EecCCcHHHHHHHHHHhCCCCCc
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----E--IFPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----~--~~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
...++||+.++|++|+++|++++|+||++. ...+..++..++..+|+.. + ...||+|.+|+.++++++++|++
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~ 203 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN 203 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcH-HHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCc
Confidence 457899999999999999999999999988 7778889999998887644 1 12499999999999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEeCC
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
|+||||+.+|+.+|+++|+++++|.+
T Consensus 204 ~l~vgD~~~dv~aA~~aG~~ti~v~r 229 (253)
T d1zs9a1 204 ILFLTDVTREASAAEEADVHVAVVVR 229 (253)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999954
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.89 E-value=4.4e-24 Score=154.58 Aligned_cols=99 Identities=15% Similarity=0.229 Sum_probs=90.8
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++++.|++.|++++++||+.. ......++..++..+|+.+.. ..||.|+.|+.+++++|++|+++
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~-~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHH-HHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 467899999999999999999999999987 788889999999999988732 34899999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
+||||+..|+.+|+++|++++++.+
T Consensus 170 l~VgD~~~Di~~A~~aG~~~v~v~r 194 (220)
T d1zrna_ 170 LFVASNAWDATGARYFGFPTCWINR 194 (220)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECT
T ss_pred EEEecChHhHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999964
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.89 E-value=2.1e-24 Score=157.86 Aligned_cols=99 Identities=20% Similarity=0.261 Sum_probs=88.4
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcEE
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDMV 129 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l 129 (171)
..++||+.++|+.|+ +|++++++||++. ......++.+|+..+|+.+.. ..||++++|+.+++++|++|++++
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l 176 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDSDT-EYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESSCH-HHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CcccccHHHHHHHhh-ccCceeeeecccc-ccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccccccc
Confidence 568999999999997 5799999999987 777889999999999988732 358999999999999999999999
Q ss_pred EEcCCc-ccccccccCCceEEEeCCCC
Q psy4436 130 FFDDEE-RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 130 ~vgD~~-~di~~a~~~G~~~i~v~~g~ 155 (171)
||||+. +|+.+|+++|+.++++.++.
T Consensus 177 ~vgD~~~~Di~~A~~~G~~~v~v~~~~ 203 (230)
T d1x42a1 177 YVGDNPVKDCGGSKNLGMTSILLDRKG 203 (230)
T ss_dssp EEESCTTTTHHHHHTTTCEEEEECTTS
T ss_pred eeecCcHhHHHHHHHcCCEEEEECCCC
Confidence 999986 69999999999999996543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=3.4e-24 Score=149.53 Aligned_cols=133 Identities=9% Similarity=-0.001 Sum_probs=94.5
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch--------h---
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE--------M--- 84 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~--------~--- 84 (171)
-|+|+||+||||+......+. -...+.+.++||+.++|+.|+++|++++++||.+. .
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~------------~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~ 69 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQ------------VDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFD 69 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCC------------CCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHH
T ss_pred CcEEEEeCCCCeEeeCCCCCc------------cCCHHHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhh
Confidence 479999999999864332211 11224568899999999999999999999999641 0
Q ss_pred ---HHHHHHHHhcCccc---cccee---e--EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 85 ---LRAHQLVDLFNWNQ---HFDHK---E--IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 85 ---~~~~~~l~~~~l~~---~fd~~---~--~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
......+...++.. +|+.. . .++||.|.++.+++++++++|++++||||+..|+.+|+++|+.++++..
T Consensus 70 ~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~ 149 (161)
T d2fpwa1 70 GPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDR 149 (161)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBT
T ss_pred hhhhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECC
Confidence 12233455555432 23221 1 2348999999999999999999999999999999999999999999965
Q ss_pred C-CcHHHH
Q psy4436 154 G-MSHSVL 160 (171)
Q Consensus 154 g-~~~~~~ 160 (171)
+ .+++.+
T Consensus 150 ~~~~~~~i 157 (161)
T d2fpwa1 150 ETLNWPMI 157 (161)
T ss_dssp TTBCHHHH
T ss_pred CCCCHHHH
Confidence 4 456544
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=3.8e-24 Score=154.96 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=90.7
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCch---hHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCC
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTE---MLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~---~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~ 126 (171)
..++|++.++|+.|+++|++++++||+.. ....+..+...++..||+.+.. ..||+|++|+.++++++++|+
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~ 175 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN 175 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence 57899999999999999999999998422 1345556778899999988722 349999999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCc-HHHHH
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS-HSVLH 161 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~-~~~~~ 161 (171)
+|+||||+..|+.+|+++|+.+++|.++.. ..+++
T Consensus 176 ~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~ 211 (222)
T d1cr6a1 176 EVVFLDDFGSNLKPARDMGMVTILVHNTASALRELE 211 (222)
T ss_dssp SEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHH
Confidence 999999999999999999999999987765 33433
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.88 E-value=2.7e-23 Score=147.76 Aligned_cols=104 Identities=8% Similarity=0.030 Sum_probs=89.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
....++||+.++|+.|+++|++++++||++. .... .++++++..+|+.+.. .+||+|++|+.+++++++ ++
T Consensus 76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~-~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~ 151 (187)
T d2fi1a1 76 EHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLE-ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SS 151 (187)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHH-HHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SS
T ss_pred hcCcccchhHHHHHHHHhhhccccccccCcc-chhh-hhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CC
Confidence 3567899999999999999999999999876 5554 7999999999988722 348889999999999986 56
Q ss_pred EEEEcCCcccccccccCCceEEEeCCCCcHHHH
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 160 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~~ 160 (171)
++||||+..|+.+|+++|+.+++++++.+..++
T Consensus 152 ~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~ 184 (187)
T d2fi1a1 152 GLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQV 184 (187)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECSCHHHHHHH
T ss_pred eEEEeCCHHHHHHHHHcCCEEEEECCCCChHhh
Confidence 999999999999999999999999876655443
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=8.7e-23 Score=144.95 Aligned_cols=136 Identities=10% Similarity=0.014 Sum_probs=96.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh----------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---------- 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~---------- 84 (171)
++++|+||+||||+...-+. . ..+.++++||+.++|+.|+++|++++++||.+..
T Consensus 1 ~~~Av~~DrDGtl~~~~~y~-------------~--~~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~ 65 (182)
T d2gmwa1 1 SVPAIFLDRDGTINVDHGYV-------------H--EIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQF 65 (182)
T ss_dssp CBCEEEECSBTTTBCCCSSC-------------C--SGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHH
T ss_pred CCCEEEEeCCCCccCCCCCC-------------C--CHHHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhh
Confidence 37899999999997422111 0 1235788999999999999999999999997531
Q ss_pred ----HHHHHHHHhcCccc---ccce------------eeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCC
Q psy4436 85 ----LRAHQLVDLFNWNQ---HFDH------------KEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 85 ----~~~~~~l~~~~l~~---~fd~------------~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G 145 (171)
......+...+... +|+. ...++||+|.++..+++++++++++++||||+..|+.+|+++|
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag 145 (182)
T d2gmwa1 66 ETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAAN 145 (182)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTT
T ss_pred hhhhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhC
Confidence 01111222222221 1100 0123599999999999999999999999999999999999999
Q ss_pred ce-EEEeCCCCcHHHHHHHHH
Q psy4436 146 VT-CIHVKDGMSHSVLHKGLK 165 (171)
Q Consensus 146 ~~-~i~v~~g~~~~~~~~~~~ 165 (171)
+. .+++.+|....+..+..+
T Consensus 146 ~~~~~lv~~g~~~~~~~~~~a 166 (182)
T d2gmwa1 146 VGTKVLVRTGKPITPEAENAA 166 (182)
T ss_dssp CSEEEEESSSSCCCHHHHHHC
T ss_pred CCcEEEECCCCCCCcccccCC
Confidence 95 577888775444433333
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.88 E-value=1.3e-22 Score=147.83 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=88.7
Q ss_pred CeeeeCCCHHHHHHHHhhCC-cEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHh---CC
Q psy4436 53 AIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKAT---GI 123 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~---~~ 123 (171)
....++||+.++|+.|+++| ++++++||++. ..+...++.+|+..+|+.+.. .++|+|..+...++.+ ++
T Consensus 88 ~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~ 166 (228)
T d2hcfa1 88 EDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 166 (228)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred cCceecCchHHHHhhhhccccccccccCCCcc-hhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCC
Confidence 45688999999999999987 99999999988 777889999999999997732 2367777766666555 78
Q ss_pred CCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 124 EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 124 ~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+|++|+||||+..|+.+|+++|+.+++|.+|..
T Consensus 167 ~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~ 199 (228)
T d2hcfa1 167 SPSQIVIIGDTEHDIRCARELDARSIAVATGNF 199 (228)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSS
T ss_pred ChhHheeecCChHHHHHHHHcCCEEEEEcCCCC
Confidence 999999999999999999999999999988764
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.88 E-value=3.6e-23 Score=149.94 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=94.3
Q ss_pred cccCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh-------
Q psy4436 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------- 84 (171)
Q Consensus 12 ~~~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~------- 84 (171)
++..+++|+||+||||+....+. .....++++||+.++|+.|+++|++++|+||.+..
T Consensus 19 ~p~~~~Aif~DrDGtl~~~~~y~---------------~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~ 83 (209)
T d2o2xa1 19 FPPHLPALFLDRDGTINVDTDYP---------------SDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGW 83 (209)
T ss_dssp CCSSCCCEEECSBTTTBCCCSCT---------------TCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCH
T ss_pred CCCCCCEEEEeCCCCeECCCCCC---------------CCHHHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhh
Confidence 34456789999999997532211 11235788999999999999999999999995310
Q ss_pred -------HHHHHHHHhcCcc--ccccee-------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccc
Q psy4436 85 -------LRAHQLVDLFNWN--QHFDHK-------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS 142 (171)
Q Consensus 85 -------~~~~~~l~~~~l~--~~fd~~-------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~ 142 (171)
......+...|+. .+|... ..++||+|.++.++++++++++++++||||+..|+.+|+
T Consensus 84 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~ 163 (209)
T d2o2xa1 84 SAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGK 163 (209)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHH
T ss_pred hhhhhhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHH
Confidence 1122234444432 111110 112499999999999999999999999999999999999
Q ss_pred cCCceEEEeCCCC
Q psy4436 143 PLGVTCIHVKDGM 155 (171)
Q Consensus 143 ~~G~~~i~v~~g~ 155 (171)
++|+.++++..|.
T Consensus 164 ~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 164 RAGLAQGWLVDGE 176 (209)
T ss_dssp HTTCSEEEEETCC
T ss_pred HCCCcEEEEeCCC
Confidence 9999999886543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.88 E-value=3.8e-23 Score=151.70 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=87.1
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+ ++.++++||++. ......++..++..+|+.+.. ..||.|++|+++++++|++|++|
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~-~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~ 167 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred ccccchhhhHHHHHHh--hhceeEEeccch-HHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhE
Confidence 4578999999999886 678999999988 777889999999999987722 34999999999999999999999
Q ss_pred EEEcCCcccccccccCCceEEEeCCC
Q psy4436 129 VFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 129 l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+||||+..|+.+|+++|+++|+|...
T Consensus 168 l~VgD~~~di~~A~~aG~~tv~v~r~ 193 (245)
T d1qq5a_ 168 LFVSSNGFDVGGAKNFGFSVARVARL 193 (245)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 99999999999999999999999643
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1e-23 Score=152.07 Aligned_cols=104 Identities=19% Similarity=0.144 Sum_probs=87.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh---HHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~---~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~ 124 (171)
....++|++.++|..|+++|++++++||.... ...+......++..+|+.+.. ..||++++|++++++++++
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 35678999999999999999999999986431 233434556677888987722 3599999999999999999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
|++++||||+..|+.+|+++|++++++.++..
T Consensus 176 p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred ccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 99999999999999999999999999987643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=1e-22 Score=149.97 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=84.5
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE-----ecCCcHHHHHHHHHHhCCCCCcE
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----FPGQKTTHFANLKKATGIEYKDM 128 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~-----~~~~k~~~~~~~~~~~~~~~~~~ 128 (171)
...++|++.++|+.|+ +|++++++||++. ......++.+|+..+|+.+.. ..||.|++|+.++++++++|+++
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~ 184 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTNGDR-QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 184 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCccCccHHHHHHHhh-cccceEEeecccc-hhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhc
Confidence 3568899999999998 5799999999987 777889999999999987732 35999999999999999999999
Q ss_pred EEEcCCc-ccccccccCCceEEEe
Q psy4436 129 VFFDDEE-RNSHDVSPLGVTCIHV 151 (171)
Q Consensus 129 l~vgD~~-~di~~a~~~G~~~i~v 151 (171)
+||||+. .|+.+|+++|+.++.+
T Consensus 185 l~iGD~~~~Di~~A~~~G~~~~~~ 208 (247)
T d2gfha1 185 VMVGDTLETDIQGGLNAGLKATVW 208 (247)
T ss_dssp EEEESCTTTHHHHHHHTTCSEEEE
T ss_pred ceeccChHhHHHHHHHcCCeEEEE
Confidence 9999997 5999999999985543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.5e-21 Score=144.72 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=47.4
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCCcH
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMSH 157 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~~ 157 (171)
.||+|..|++++++++++|++++||||++. |+.+|+++|+.+++|.+|...
T Consensus 175 ~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~ 226 (250)
T d2c4na1 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSS 226 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred ccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCC
Confidence 489999999999999999999999999986 999999999999999888643
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=3.2e-23 Score=146.26 Aligned_cols=106 Identities=25% Similarity=0.325 Sum_probs=89.3
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc-Ccccccceee-----EecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-NWNQHFDHKE-----IFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~-~l~~~fd~~~-----~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
....+++++..++..++.+|++++++||++. ......+... ++..+|+.+. ..+||++++|+.+++++|++|+
T Consensus 81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~ 159 (197)
T d2b0ca1 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS 159 (197)
T ss_dssp CEEEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred hccccCchhHHHHHHHHhcCCeEEEEeCccH-HHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCC
Confidence 3467899999999999999999999999866 3334355554 7888898773 2459999999999999999999
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCCcHHH
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 159 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~~~~~ 159 (171)
+|+||||+..|+.+|+++|++++++.+..+..+
T Consensus 160 ~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~ 192 (197)
T d2b0ca1 160 DTVFFDDNADNIEGANQLGITSILVKDKTTIPD 192 (197)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred eEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHH
Confidence 999999999999999999999999987665443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.83 E-value=5e-22 Score=144.01 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=86.0
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeE--------ecCCcHHHHHHHHHHhCCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI--------FPGQKTTHFANLKKATGIEY 125 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~--------~~~~k~~~~~~~~~~~~~~~ 125 (171)
...++|++.++|++|+.+ .+++||+.. ..+...++++++..+|+.... .+||++..|.+++++++++|
T Consensus 83 ~~~~~~g~~~~L~~l~~~---~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p 158 (222)
T d2fdra1 83 DVKIIDGVKFALSRLTTP---RCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP 158 (222)
T ss_dssp HCCBCTTHHHHHHHCCSC---EEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred ccchhhhHHHHhhhcccc---ceeeeecch-hhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCC
Confidence 467899999999988754 578999877 778889999999999986421 24888899999999999999
Q ss_pred CcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 126 KDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 126 ~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
++|+||||+..|+.+|+++|+.++++.++.
T Consensus 159 ~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~ 188 (222)
T d2fdra1 159 DRVVVVEDSVHGIHGARAAGMRVIGFTGAS 188 (222)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred ceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence 999999999999999999999999998875
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.82 E-value=1.6e-20 Score=139.13 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=46.9
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++.+|+++++++|++|++++||||+.. |+.+|+++|+.+++|.+|..
T Consensus 179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~ 229 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT 229 (253)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCC
Confidence 589999999999999999999999999976 99999999999999988764
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.81 E-value=8.6e-20 Score=135.57 Aligned_cols=50 Identities=14% Similarity=0.137 Sum_probs=46.7
Q ss_pred cCCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCCc
Q psy4436 107 PGQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 107 ~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~ 156 (171)
.||++.+|..++++++++|++++||||+.. |+.+|+++|+.+++|.+|..
T Consensus 184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~ 234 (261)
T d1vjra_ 184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGET 234 (261)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSC
T ss_pred CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCC
Confidence 488899999999999999999999999975 99999999999999988864
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.80 E-value=1e-19 Score=134.92 Aligned_cols=49 Identities=8% Similarity=0.148 Sum_probs=46.5
Q ss_pred CCcHHHHHHHHHHhCCCCCcEEEEcCCcc-cccccccCCceEEEeCCCCc
Q psy4436 108 GQKTTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 108 ~~k~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~~~G~~~i~v~~g~~ 156 (171)
||.|.+|+.+++++|++|++|+||||+.. |+.+|+++|+.+++|.+|..
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~ 229 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFT 229 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSS
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCC
Confidence 89999999999999999999999999987 99999999999999988764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=2.3e-20 Score=135.50 Aligned_cols=93 Identities=5% Similarity=-0.006 Sum_probs=79.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee----------eEe--------cCCcHHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------EIF--------PGQKTTHFA 115 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~----------~~~--------~~~k~~~~~ 115 (171)
..+++|++.++++.|+++|++++++||+.. ..+..+++++++..+|... ... .++++....
T Consensus 73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~-~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 151 (226)
T d2feaa1 73 DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 151 (226)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred ccchhHHHHHHHHHHHhcccccccCCcchh-hhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHH
Confidence 467899999999999999999999999987 8888899999988776221 011 245667789
Q ss_pred HHHHHhCCCCCcEEEEcCCcccccccccCCce
Q psy4436 116 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 147 (171)
Q Consensus 116 ~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~ 147 (171)
.+++++++++++++||||+.+|+.+|+++|+.
T Consensus 152 ~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~ 183 (226)
T d2feaa1 152 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 183 (226)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEE
T ss_pred HHHHHhcCCCceEEEEeCchhhHHHHHHCCEE
Confidence 99999999999999999999999999999974
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.76 E-value=1.8e-18 Score=118.13 Aligned_cols=130 Identities=15% Similarity=0.032 Sum_probs=85.9
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLV 91 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l 91 (171)
.+||+|+||+||||++........ .. ......++|++.++|+.|+++|++|+++||++.. .....++
T Consensus 5 ~kpk~vifDiDgTL~~~~~~~~~~----------~~-~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l 73 (149)
T d1ltqa1 5 GKPKAVIFDVDGTLAKMNGRGPYD----------LE-KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY 73 (149)
T ss_dssp TSCEEEEEETBTTTBCCSSCCTTC----------GG-GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH
T ss_pred CCCcEEEEEcCCCcEeCCCCCcCC----------cc-ccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH
Confidence 468999999999998643321100 00 0123467999999999999999999999997631 1112223
Q ss_pred HhcC-----c-ccccceeeEe----cCCcHHHHHHHHHHhCCCCCc-EEEEcCCcccccccccCCceEEEeCCC
Q psy4436 92 DLFN-----W-NQHFDHKEIF----PGQKTTHFANLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 92 ~~~~-----l-~~~fd~~~~~----~~~k~~~~~~~~~~~~~~~~~-~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+..+ + ..+++..... ..|+.......++++..++.+ +++|||+..|+++|+++|+.++.|.+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 74 RMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 2211 0 1112221111 134556667777777666555 467899999999999999999999887
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=8.8e-19 Score=126.16 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=71.9
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHH-----------HHhcCcccccceee----EecCCcHHHHHHHHH
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL-----------VDLFNWNQHFDHKE----IFPGQKTTHFANLKK 119 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~-----------l~~~~l~~~fd~~~----~~~~~k~~~~~~~~~ 119 (171)
..+++++.+.+. .+..+++.|+... ...... +..+++..+|+.+. ..+||.+.+|+.+++
T Consensus 96 ~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~ 170 (225)
T d2g80a1 96 APVYADAIDFIK----RKKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR 170 (225)
T ss_dssp BCCCHHHHHHHH----HCSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred ccchhhHHHHHh----hHHhhhhhhhccc-hhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHHHHH
Confidence 334554555444 4466778888755 333322 35568888998772 235999999999999
Q ss_pred HhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 120 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 120 ~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
++|++|++|+||||+..|+.+|+++|++++++.+
T Consensus 171 ~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r 204 (225)
T d2g80a1 171 DIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 204 (225)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred hcccCchhceeecCCHHHHHHHHHcCCEEEEEeC
Confidence 9999999999999999999999999999999954
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=4.3e-17 Score=118.08 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=72.6
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccc----------ee-eEec--------CCcHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD----------HK-EIFP--------GQKTTHF 114 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd----------~~-~~~~--------~~k~~~~ 114 (171)
...++||+.++++.|+++|++++|+|++.. ..++.+++.+|+..++. .. .... ..|....
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~-~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCch-HHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence 466899999999999999999999999987 78888999999875321 11 1111 1244556
Q ss_pred HHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeC
Q psy4436 115 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 152 (171)
Q Consensus 115 ~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~ 152 (171)
+.+.++ .+++++++|||+.+|+.+++.+|.. +++.
T Consensus 159 ~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~-va~~ 193 (217)
T d1nnla_ 159 KLLKEK--FHFKKIIMIGDGATDMEACPPADAF-IGFG 193 (217)
T ss_dssp HHHHHH--HCCSCEEEEESSHHHHTTTTTSSEE-EEEC
T ss_pred HHHHhc--cCccccEEEEeCHhhHHHHHhCCce-EEEC
Confidence 665544 4679999999999999999999975 4553
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.63 E-value=8.6e-16 Score=110.62 Aligned_cols=114 Identities=13% Similarity=0.006 Sum_probs=88.9
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
++|+|+||+||||++. .-.+.+.+.++|++|+++|++++++|+++. ..........
T Consensus 1 kiK~i~~D~DGTL~~~-----------------------~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~-~~~~~~~~~~ 56 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP-----------------------NRMIHEKALEAIRRAESLGIPIMLVTGNTV-QFAEAASILI 56 (230)
T ss_dssp CCCEEEEESTTTTBCT-----------------------TSCBCHHHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHH
T ss_pred CceEEEEecCCCCcCC-----------------------CCccCHHHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHhc
Confidence 3799999999999752 112457789999999999999999999987 6666677666
Q ss_pred Cccc----------------------------------------------------------------------cc----
Q psy4436 95 NWNQ----------------------------------------------------------------------HF---- 100 (171)
Q Consensus 95 ~l~~----------------------------------------------------------------------~f---- 100 (171)
++.. ..
T Consensus 57 ~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (230)
T d1wr8a_ 57 GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136 (230)
T ss_dssp TCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCE
T ss_pred CCCcccccccceeeeccccccccccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceE
Confidence 5543 00
Q ss_pred -----ceeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 101 -----DHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 101 -----d~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
..++..+ .+|+..++.++++++++++++++|||+.+|+.+++.+|+ ++.+.+
T Consensus 137 ~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~-~vav~n 195 (230)
T d1wr8a_ 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY-KVAVAQ 195 (230)
T ss_dssp EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred EeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCe-EEEECC
Confidence 0112233 577899999999999999999999999999999999996 455544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.62 E-value=9.4e-17 Score=114.03 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=98.3
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCc---------ce---------ec----------C---ceeeccCCCeeeeCCCHH
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPP---------FK---------KI----------G---DKVLDAGGAIIKYYRDVP 62 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~---------~~---------~~----------~---~~~~~~~~~~~~~~~~v~ 62 (171)
+++|+|+||+||||+++++...+... +. .. . ............+++++.
T Consensus 2 ~kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAE 81 (210)
T ss_dssp CCCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHTCCBCTTHH
T ss_pred CCCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhhhHH
Confidence 35799999999999987654322110 00 00 0 000111113467889999
Q ss_pred HHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee---------E------ecCCcHHHHHHHHHHhCCCCCc
Q psy4436 63 AILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE---------I------FPGQKTTHFANLKKATGIEYKD 127 (171)
Q Consensus 63 ~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~---------~------~~~~k~~~~~~~~~~~~~~~~~ 127 (171)
+.++.++.+|..++++|++.. .......+..+...+|.... . ...+++.....+++.+++++++
T Consensus 82 ~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (210)
T d1j97a_ 82 ETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLED 160 (210)
T ss_dssp HHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHcCCEEEeeccccc-ccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHHhcccccc
Confidence 999999999999999999877 67777888888777663320 0 0144568889999999999999
Q ss_pred EEEEcCCcccccccccCCceEEEe
Q psy4436 128 MVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 128 ~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
+++|||+.+|+.+++.+|+. +++
T Consensus 161 ~i~iGDs~nDi~m~~~ag~~-va~ 183 (210)
T d1j97a_ 161 TVAVGDGANDISMFKKAGLK-IAF 183 (210)
T ss_dssp EEEEESSGGGHHHHHHCSEE-EEE
T ss_pred eEEecCCcChHHHHHHCCCC-EEE
Confidence 99999999999999999975 445
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.61 E-value=1.1e-15 Score=110.52 Aligned_cols=116 Identities=14% Similarity=0.075 Sum_probs=89.8
Q ss_pred cCCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 14 ~~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
+|+|+++||+||||++. ...+.+++.+++++|+++|++++++|+++. ...+.....
T Consensus 1 ~miKli~~D~DGTL~~~-----------------------~~~i~~~~~~al~~l~~~g~~v~~~TGr~~-~~~~~~~~~ 56 (225)
T d1l6ra_ 1 HMIRLAAIDVDGNLTDR-----------------------DRLISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIF 56 (225)
T ss_dssp CCCCEEEEEHHHHSBCT-----------------------TSCBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHH
T ss_pred CCeEEEEEecCCCCcCC-----------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCch-hhhHHHHHH
Confidence 37899999999999752 223467899999999999999999999977 556666666
Q ss_pred cCccc--------------------------------------------------------------------------c
Q psy4436 94 FNWNQ--------------------------------------------------------------------------H 99 (171)
Q Consensus 94 ~~l~~--------------------------------------------------------------------------~ 99 (171)
+++.. .
T Consensus 57 ~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 136 (225)
T d1l6ra_ 57 LGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVI 136 (225)
T ss_dssp HTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEE
T ss_pred cCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEE
Confidence 66544 0
Q ss_pred cc---eeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 100 FD---HKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 100 fd---~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
+. ..+..| ..|...+++++++++++++++++|||+.+|+.+++.+|. ++.+.++
T Consensus 137 ~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na 195 (225)
T d1l6ra_ 137 FYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANA 195 (225)
T ss_dssp EEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTS
T ss_pred EECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCC
Confidence 00 012223 356788999999999999999999999999999999995 5566544
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.57 E-value=1.8e-15 Score=107.42 Aligned_cols=123 Identities=16% Similarity=0.187 Sum_probs=86.4
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeee-CCCHHHHHHHHhhCCcEEEEEcCCchh---------
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKY-YRDVPAILKYLKQNNCLVAAASRTTEM--------- 84 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~l~~L~~~g~~i~i~S~~~~~--------- 84 (171)
.-|+++||+||||+...... .+-.......+ +|++.+.|+.|+++|+.++|+||.+.-
T Consensus 20 ~~Kia~fDrDGtLik~~~~~------------~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~ 87 (195)
T d1yj5a1 20 QGKVAAFDLDGTLITTRSGK------------VFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEV 87 (195)
T ss_dssp CSCEEEECSBTTTEECSSSC------------SSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHH
T ss_pred cCcEEEEECCCceEeeCCCC------------cCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHH
Confidence 45899999999997532211 00111223444 799999999999999999999995310
Q ss_pred --HHHHHHHHhcCccccccee---eEecCCcHHHHHHHHHHhC----CCCCcEEEEcCCc-----------------ccc
Q psy4436 85 --LRAHQLVDLFNWNQHFDHK---EIFPGQKTTHFANLKKATG----IEYKDMVFFDDEE-----------------RNS 138 (171)
Q Consensus 85 --~~~~~~l~~~~l~~~fd~~---~~~~~~k~~~~~~~~~~~~----~~~~~~l~vgD~~-----------------~di 138 (171)
......++.++....+-.. ..++||++.++..++++++ ++.++++||||.. .|+
T Consensus 88 ~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~ 167 (195)
T d1yj5a1 88 FKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADR 167 (195)
T ss_dssp HHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHH
T ss_pred HHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHH
Confidence 2233355555554211111 2356999999999999986 8899999999954 689
Q ss_pred cccccCCceEE
Q psy4436 139 HDVSPLGVTCI 149 (171)
Q Consensus 139 ~~a~~~G~~~i 149 (171)
..|.++|+..+
T Consensus 168 ~fA~N~gikF~ 178 (195)
T d1yj5a1 168 LFALNVGLPFA 178 (195)
T ss_dssp HHHHHHTCCEE
T ss_pred HHHHHCCCccc
Confidence 99999999864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.56 E-value=1.8e-14 Score=107.12 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=40.6
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...++++++.+|++++++++|||+.+|+.+.+.+| .++++.++.
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~-~svam~na~ 258 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAG-KGVAMGNAR 258 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSS-EEEECTTCC
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCC-eEEEeCCCC
Confidence 5778899999999999999999999999999999999 556776654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=1.5e-14 Score=106.92 Aligned_cols=46 Identities=20% Similarity=0.326 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...++.+++.++++++++++|||+.+|+.+.+.+| .++.+.++.
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~-~~~am~na~ 242 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG-VGVAVDNAI 242 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS-EEEECTTSC
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCC-cEEEeCCCC
Confidence 4778899999999999999999999999999999999 455665543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.53 E-value=5.3e-14 Score=101.93 Aligned_cols=113 Identities=13% Similarity=0.034 Sum_probs=87.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhc
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF 94 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~ 94 (171)
|+|+|+||+||||++... .+...++|++|+++|++++++|+++. .....+++.+
T Consensus 1 miKli~~DlDGTLl~~~~-------------------------~~~~~~ai~~l~~~G~~~~~aTGR~~-~~~~~~~~~~ 54 (243)
T d1wzca1 1 MIRLIFLDIDKTLIPGYE-------------------------PDPAKPIIEELKDMGFEIIFNSSKTR-AEQEYYRKEL 54 (243)
T ss_dssp CEEEEEECCBTTTBSSSC-------------------------SGGGHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHH
T ss_pred CcEEEEEeCCCCCCCCCC-------------------------CHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHh
Confidence 579999999999976221 23467999999999999999999988 6777788888
Q ss_pred Cccc----------------------------------------------------------------------------
Q psy4436 95 NWNQ---------------------------------------------------------------------------- 98 (171)
Q Consensus 95 ~l~~---------------------------------------------------------------------------- 98 (171)
++..
T Consensus 55 ~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (243)
T d1wzca1 55 EVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELV 134 (243)
T ss_dssp TCCSCEEETTTTEEEECTTCCC----------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGH
T ss_pred cccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhhhHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHH
Confidence 7764
Q ss_pred ------cc-------------------c-------eeeEec--CCcHHHHHHHHHHh-CCCCCcEEEEcCCccccccccc
Q psy4436 99 ------HF-------------------D-------HKEIFP--GQKTTHFANLKKAT-GIEYKDMVFFDDEERNSHDVSP 143 (171)
Q Consensus 99 ------~f-------------------d-------~~~~~~--~~k~~~~~~~~~~~-~~~~~~~l~vgD~~~di~~a~~ 143 (171)
.+ . ..+..+ -.|....+++++++ +++++++++|||+.+|+.+.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~ 214 (243)
T d1wzca1 135 PLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV 214 (243)
T ss_dssp HHHTCCSSEEEECBCSSSCHHHHHHHTTCEEEECSSSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT
T ss_pred HHHHhhhcchhhhhhhhHHHHHhhhhcCeEEeecccccchhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHc
Confidence 00 0 001112 34677788999988 5899999999999999999999
Q ss_pred CCceEEEeCCC
Q psy4436 144 LGVTCIHVKDG 154 (171)
Q Consensus 144 ~G~~~i~v~~g 154 (171)
+| .++++.++
T Consensus 215 a~-~~va~~Na 224 (243)
T d1wzca1 215 VD-KVFIVGSL 224 (243)
T ss_dssp SS-EEEEESSC
T ss_pred CC-cEEEeCCC
Confidence 99 56666554
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=7.4e-14 Score=100.26 Aligned_cols=59 Identities=25% Similarity=0.237 Sum_probs=47.9
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
|-+|++|+||||++... .+.+.+.++|++|+++|++++++|+++. ..+...++.++
T Consensus 4 ~~li~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~i~TGR~~-~~~~~~~~~~~ 59 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDSHS-----------------------YDWQPAAPWLTRLREANVPVILCSSKTS-AEMLYLQKTLG 59 (232)
T ss_dssp CEEEEEECTTTTSCSSC-----------------------CSCCTTHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHTT
T ss_pred CEEEEEECCCCccCCcC-----------------------cCCHHHHHHHHHHHHCCCEEEEEeCCCh-hhchhHHHHhc
Confidence 55788899999976321 2357789999999999999999999988 66777888887
Q ss_pred ccc
Q psy4436 96 WNQ 98 (171)
Q Consensus 96 l~~ 98 (171)
+..
T Consensus 60 ~~~ 62 (232)
T d1xvia_ 60 LQG 62 (232)
T ss_dssp CTT
T ss_pred cCC
Confidence 753
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=1.9e-14 Score=106.26 Aligned_cols=45 Identities=11% Similarity=0.149 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 154 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g 154 (171)
.|...++++++++|++++++++|||+.+|+.+.+.+|. ++.+.++
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~-~vam~Na 234 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARY-SFAMGNA 234 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSE-EEECTTC
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCe-EEEeCCC
Confidence 47788999999999999999999999999999999984 4556554
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.50 E-value=5.7e-14 Score=98.40 Aligned_cols=115 Identities=20% Similarity=0.186 Sum_probs=87.5
Q ss_pred CCcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHH--HHHHHHhhCCcEEEEEcCCchhHHHHHHHH
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVP--AILKYLKQNNCLVAAASRTTEMLRAHQLVD 92 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~ 92 (171)
.+|+++||+||+|++..++.. ..+..+.-|. +. ..++.|+..|+.++++|.... ........
T Consensus 4 ~ik~~i~DvDGVlTDG~v~~~--------------~dG~e~k~F~-~~Dg~gi~~l~~~gi~~~iis~~~~-~~v~~~~~ 67 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQLHYD--------------ANGEAIKSFH-VRDGLGIKMLMDADIQVAVLSGRDS-PILRRRIA 67 (177)
T ss_dssp GCCEEEEECTTTTSCSEEEEE--------------TTEEEEEEEE-HHHHHHHHHHHHTTCEEEEEESCCC-HHHHHHHH
T ss_pred cCeEEEEccCCcccCCeEEEe--------------CCCCEEEEEE-CcchHHHHHHhhhcEEEEEecCCch-hHHHHHHh
Confidence 489999999999998765421 1122222221 22 258999999999999999877 66676888
Q ss_pred hcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEE
Q psy4436 93 LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 149 (171)
Q Consensus 93 ~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i 149 (171)
.+++...+. ...+|...++.+++++++++++++||||..+|+.+.+.+|+..+
T Consensus 68 ~l~~~~~~~----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~sia 120 (177)
T d1k1ea_ 68 DLGIKLFFL----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA 120 (177)
T ss_dssp HHTCCEEEE----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred hhccccccc----ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEE
Confidence 888764332 23567788999999999999999999999999999999996443
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.49 E-value=9.2e-15 Score=113.96 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=85.4
Q ss_pred eeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceee------------------EecCCcHHHHHHH
Q psy4436 56 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKE------------------IFPGQKTTHFANL 117 (171)
Q Consensus 56 ~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~------------------~~~~~k~~~~~~~ 117 (171)
.+.|++.++|+.|+++|++++++||.+. ..++..++.+|+..+|+... ...||.|..|..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~-~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 3566999999999999999999999988 88898999999999996431 1237888888887
Q ss_pred HHH--------------hCCCCCcEEEEcCCcccccccccCCceEEEeCCCCc
Q psy4436 118 KKA--------------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 156 (171)
Q Consensus 118 ~~~--------------~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~~ 156 (171)
+.. +++++++++||||+.+|+.+|+++|+.+|+|.+|+.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~ 346 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence 753 457788999999999999999999999999988865
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.48 E-value=4.3e-14 Score=104.65 Aligned_cols=46 Identities=20% Similarity=0.196 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...+..+++.++++++++++|||+.+|+.+.+.+|. ++.+.++.
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~-~va~~na~ 252 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY-SFAVANAT 252 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE-EEECTTCC
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCc-EEEeCCCC
Confidence 56788999999999999999999999999999999995 56666554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.45 E-value=3.5e-14 Score=104.67 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=41.0
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...+++++++++++++++++|||+.+|+.+.+.+|. ++.+.++.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~ 231 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAK 231 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCC
Confidence 57788999999999999999999999999999999997 57776654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.35 E-value=2.5e-12 Score=94.89 Aligned_cols=46 Identities=15% Similarity=0.317 Sum_probs=40.6
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...++++++.++++++++++|||+.+|+.+.+.+|. ++.+.++.
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~-sva~~na~ 235 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL-RVAMENAI 235 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE-EEECTTSC
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCc-EEEeCCCC
Confidence 57788999999999999999999999999999999995 56776654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.31 E-value=8e-12 Score=90.78 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=39.8
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
.|....+.+++++|++++++++|||+.+|+.+.+.+| .++.+.++.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~-~~vav~na~ 207 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSA-RGVIVRNAQ 207 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSS-EEEECTTCC
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCC-cEEEeCCCC
Confidence 4678899999999999999999999999999999999 556665433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=2.1e-12 Score=92.83 Aligned_cols=52 Identities=13% Similarity=0.120 Sum_probs=36.5
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcC----CcccccccccCCceEEEeCCCCcHHHHHHHHHH
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQ 166 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD----~~~di~~a~~~G~~~i~v~~g~~~~~~~~~~~~ 166 (171)
.|...++++ ++++++++++||| +.||+.+.+.+|..++.+.+ .++..+.++.
T Consensus 185 sKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~---~~~~~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA---PEDTRRICEL 240 (243)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS---HHHHHHHHHH
T ss_pred CHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC---HHHHHHHHHH
Confidence 344445554 3678999999999 56999999999988888865 4455555444
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.29 E-value=1.7e-12 Score=91.37 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=71.2
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee---------eEecCCcHHHHHHHHHHhCCC
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------EIFPGQKTTHFANLKKATGIE 124 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~---------~~~~~~k~~~~~~~~~~~~~~ 124 (171)
.....++....++.++ ++++.+++|.... .........++...++... .....+++......++.++++
T Consensus 67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLR-ERFQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHH-TTSEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hccccchHHHHHHHhh-cCceEEEeccCch-HHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhccc
Confidence 4567888888888765 6789999998866 6666677778776554322 111234444577888899999
Q ss_pred CCcEEEEcCCcccccccccCCceEEEe
Q psy4436 125 YKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 125 ~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
++++++|||+.+|+.+.+.+|.. +++
T Consensus 145 ~~eviaiGDg~NDi~Ml~~Ag~g-IAm 170 (206)
T d1rkua_ 145 YYRVIAAGDSYNDTTMLSEAHAG-ILF 170 (206)
T ss_dssp TCEEEEEECSSTTHHHHHHSSEE-EEE
T ss_pred ccceEEecCCccCHHHHHhCCcc-EEE
Confidence 99999999999999999999964 444
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=3e-12 Score=91.03 Aligned_cols=135 Identities=12% Similarity=0.096 Sum_probs=82.5
Q ss_pred CCcEEEEeCCCCCCCceecccc--------CCcc--eecC-ceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCch
Q psy4436 15 FPKLAVFDLDHTLWPFHVYIDV--------IPPF--KKIG-DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83 (171)
Q Consensus 15 ~~k~vvfDlDgTL~~~~~~~~~--------~~~~--~~~~-~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~ 83 (171)
.|-+|+||+|.|+++...+... +..+ .+.. ..+.......-.+.||+.++++.++++|++|..+||+..
T Consensus 34 ~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~ 113 (209)
T d2b82a1 34 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 113 (209)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCch
Confidence 3569999999999986443110 0001 1111 112222223346789999999999999999999999743
Q ss_pred h---HHHHHHHHhcCcccccceeeEec--CCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCC
Q psy4436 84 M---LRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153 (171)
Q Consensus 84 ~---~~~~~~l~~~~l~~~fd~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~ 153 (171)
. ...+.+.+.+|+...-.....+. ++....=+..++++++ .+++||...|+.+|+++|++++.+-.
T Consensus 114 ~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 114 TKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp CSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred hhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 2 33343334588763221111111 1111111222355655 88999999999999999999999844
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=5e-11 Score=85.31 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHhCCCCCcEEEEcCCc----ccccccccCCceEEEeCCCC
Q psy4436 109 QKTTHFANLKKATGIEYKDMVFFDDEE----RNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 109 ~k~~~~~~~~~~~~~~~~~~l~vgD~~----~di~~a~~~G~~~i~v~~g~ 155 (171)
.|...+++++ +.+++++++|||+. +|+.+.+.+|..++.|.++.
T Consensus 185 sKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~ 232 (244)
T d2fuea1 185 DKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ 232 (244)
T ss_dssp STTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH
T ss_pred cHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHH
Confidence 4566677765 45899999999975 99999999999899987644
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.00 E-value=1.6e-10 Score=86.46 Aligned_cols=91 Identities=9% Similarity=0.030 Sum_probs=65.3
Q ss_pred eeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccc----cc--------ee-eEecC------CcHHHH
Q psy4436 54 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH----FD--------HK-EIFPG------QKTTHF 114 (171)
Q Consensus 54 ~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~----fd--------~~-~~~~~------~k~~~~ 114 (171)
...+.||+.++++.|+++|++++|+|++.. ..+..+++++++... +. .. ..++. .|....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~-~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 467899999999999999999999999987 888989999987631 21 01 11111 122333
Q ss_pred HHHHH--HhCCCCCcEEEEcCCcccccccccCC
Q psy4436 115 ANLKK--ATGIEYKDMVFFDDEERNSHDVSPLG 145 (171)
Q Consensus 115 ~~~~~--~~~~~~~~~l~vgD~~~di~~a~~~G 145 (171)
.+... +..-+..+++++||+.+|+.+|..+.
T Consensus 212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 33222 23346788999999999999998754
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.97 E-value=5.9e-10 Score=79.19 Aligned_cols=51 Identities=16% Similarity=0.081 Sum_probs=37.3
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHH
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAH 88 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~ 88 (171)
+|+||+||||+++.... +...+.+.+.++|++|++. ..++++|+++. ..+.
T Consensus 2 Li~~DlDGTL~~~~~~~------------------~~~~i~~~~~~~l~~l~~~-~~v~i~TGR~~-~~l~ 52 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP------------------EESYADAGLLSLISDLKER-FDTYIVTGRSP-EEIS 52 (229)
T ss_dssp EEEEECBTTTBCCCSCG------------------GGCCCCHHHHHHHHHHHHH-SEEEEECSSCH-HHHH
T ss_pred EEEEEecCCCCCCCCCh------------------hhCCCCHHHHHHHHHHhhC-CCEEEEcCCCH-HHhh
Confidence 79999999998643221 1234567889999999874 67999999977 4443
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.96 E-value=6.9e-09 Score=68.88 Aligned_cols=109 Identities=14% Similarity=0.064 Sum_probs=80.4
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcC
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN 95 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~ 95 (171)
..+++||.+|+++-. -.-++.|++.+.++.|++.|+++.++|+-.. ..+..+.+.+|
T Consensus 3 ~~~~~~d~~~~~~~g----------------------~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~-~~a~~ia~~lg 59 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG----------------------KPDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELN 59 (135)
T ss_dssp CCEEEEECCCCCBCS----------------------CCCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHT
T ss_pred EEEEEECCceEEEEe----------------------cCCCCCccHHHHHHHHHHcCCEEEEEcCcch-hhhhHHHhhhh
Confidence 568999999999531 1235689999999999999999999998877 77888889999
Q ss_pred cccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 96 WNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 96 l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
+..+|... .|+.-..+.++++-. ..+.|+||+.+|..+.+.+++. +.+..+.
T Consensus 60 I~~v~~~~------~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advg-ia~~~~~ 111 (135)
T d2b8ea1 60 LDLVIAEV------LPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGS 111 (135)
T ss_dssp CSEEECSC------CHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEE-EEECCC-
T ss_pred hhhhcccc------chhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCee-eecCccC
Confidence 87555332 222233344444443 6799999999999999998865 3444433
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=98.88 E-value=3.8e-09 Score=68.93 Aligned_cols=50 Identities=20% Similarity=0.059 Sum_probs=39.9
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCc
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 82 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~ 82 (171)
+|.++||+||||+..... ......|.+++++.|+.|+++|++|++.|.+.
T Consensus 1 mK~i~~DiDGTI~~~~~~-----------------~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 1 MKKLIVDLDGTLTQANTS-----------------DYRNVLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CCEEEECSTTTTBCCCCS-----------------CGGGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEeCCCCeECCCCC-----------------CcCccCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 467999999999753221 11245789999999999999999999999874
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.66 E-value=1.3e-07 Score=64.84 Aligned_cols=115 Identities=10% Similarity=0.018 Sum_probs=80.3
Q ss_pred cEEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCc
Q psy4436 17 KLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW 96 (171)
Q Consensus 17 k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l 96 (171)
.+++||-+|||+-... -++.|++.++++.|++.|+++.++|+-+. ..+....+.+|+
T Consensus 3 ~~~~~d~~~~~~~~~~----------------------Dp~R~~~~~~I~~l~~~GI~v~miTGD~~-~tA~~ia~~~Gi 59 (168)
T d1wpga2 3 SVICSDKTGTLTTNQL----------------------DPPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGI 59 (168)
T ss_dssp CEEEECCTTTTBCCCE----------------------CCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTS
T ss_pred EEEEECCccEEEEEec----------------------CCCchhHHHHHHHHHHCcCEEEEECCCCH-HHHHHHHHHcCC
Confidence 3689999999964322 25689999999999999999999999877 888889999998
Q ss_pred cccccee-------------------------eEecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEe
Q psy4436 97 NQHFDHK-------------------------EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 151 (171)
Q Consensus 97 ~~~fd~~-------------------------~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v 151 (171)
...-..+ ..+..-.|+.=..+.+.++-.-..+.|+||+.+|..+.+.+.+. +.+
T Consensus 60 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvG-Ia~ 138 (168)
T d1wpga2 60 FGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG-IAM 138 (168)
T ss_dssp SCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEE-EEE
T ss_pred CCCccccccccccccccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEE-EEe
Confidence 5422111 12222233322333333433447799999999999999998853 444
Q ss_pred CCCC
Q psy4436 152 KDGM 155 (171)
Q Consensus 152 ~~g~ 155 (171)
..|.
T Consensus 139 ~~gt 142 (168)
T d1wpga2 139 GSGT 142 (168)
T ss_dssp TTSC
T ss_pred cccc
Confidence 4443
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.64 E-value=4.2e-08 Score=63.79 Aligned_cols=65 Identities=17% Similarity=0.005 Sum_probs=48.7
Q ss_pred EEEEeCCCCCCCceeccccCCcceecCceeeccCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchh--HHHHHHHHhcC
Q psy4436 18 LAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFN 95 (171)
Q Consensus 18 ~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~--~~~~~~l~~~~ 95 (171)
.|+||+||||+.+.. ....+|.|++.+.|+.|+++|..|++.|.++.. .....++++.+
T Consensus 2 ti~vDiDGTl~~~~~-------------------~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~ 62 (122)
T d2obba1 2 TIAVDFDGTIVEHRY-------------------PRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARG 62 (122)
T ss_dssp EEEECCBTTTBCSCT-------------------TSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTT
T ss_pred EEEEEcCCCcCCCCC-------------------CccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcC
Confidence 389999999975321 123468999999999999999999999998542 22445788888
Q ss_pred ccccccee
Q psy4436 96 WNQHFDHK 103 (171)
Q Consensus 96 l~~~fd~~ 103 (171)
+. |+.+
T Consensus 63 i~--yd~i 68 (122)
T d2obba1 63 LE--FYAA 68 (122)
T ss_dssp CC--CSEE
T ss_pred CC--ceeh
Confidence 76 5544
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=9e-09 Score=71.67 Aligned_cols=148 Identities=14% Similarity=0.021 Sum_probs=87.9
Q ss_pred CcEEEEeCCCCCCCceeccccCCcceecCceeec--cCCCeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh
Q psy4436 16 PKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLD--AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~ 93 (171)
..++|+|||+||+.+.........+... .... ...-.+...||+.++|+.+.+. +.++|.|.+.. ..+..+++.
T Consensus 15 k~~LVLDLDeTLihs~~~~~~~~~~~~~--~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~-~YA~~il~~ 90 (181)
T d1ta0a_ 15 KICVVIDLDETLVHSSFKPVNNADFIIP--VEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVADL 90 (181)
T ss_dssp SCEEEECCBTTTEEEESSCCTTCSEEEE--EEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHH
T ss_pred CeEEEEeCCCCEEccccCCCCCccceee--ecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCcH-HHHHHHHHH
Confidence 3589999999998643321110000000 0000 0011356799999999999977 99999999988 899999999
Q ss_pred cCcccccceee---EecCCcHHHHHHHHHHhCCCCCcEEEEcCCcccccccccCCceEEEeCCC---CcHHHHHHHHHHh
Q psy4436 94 FNWNQHFDHKE---IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG---MSHSVLHKGLKQW 167 (171)
Q Consensus 94 ~~l~~~fd~~~---~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~~a~~~G~~~i~v~~g---~~~~~~~~~~~~~ 167 (171)
+.-...|...- .+.. ....+.+-++.++-+.+++++|||++.....-...|+..--.... .....+...|+..
T Consensus 91 ldp~~~~~~~~~r~~c~~-~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f~~~~~D~eL~~l~~~L~~l 169 (181)
T d1ta0a_ 91 LDKWGAFRARLFRESCVF-HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQL 169 (181)
T ss_dssp HCSSCCEEEEECGGGSEE-ETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCCSSCTTCCHHHHHHHHHHHH
T ss_pred hccCCceeEEEEeeeeee-cCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCcCCCCCcHHHHHHHHHHHHH
Confidence 98766554331 0100 001122334567888899999999998765544445433323222 2233444455554
Q ss_pred h
Q psy4436 168 A 168 (171)
Q Consensus 168 ~ 168 (171)
+
T Consensus 170 ~ 170 (181)
T d1ta0a_ 170 S 170 (181)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=1.2e-07 Score=66.19 Aligned_cols=90 Identities=9% Similarity=0.029 Sum_probs=60.2
Q ss_pred CeeeeCCCHHHHHHHHhhCC-cEEEEEcCCchh-----HHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCC
Q psy4436 53 AIIKYYRDVPAILKYLKQNN-CLVAAASRTTEM-----LRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYK 126 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g-~~i~i~S~~~~~-----~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~ 126 (171)
..++++||+.++++.|++.| +.+.++|..+.. ..-..++++.........+ .+...|. .+..
T Consensus 71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~-~~t~~K~----------~~~~- 138 (195)
T d1q92a_ 71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQI-VLTRDKT----------VVSA- 138 (195)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGE-EECSCST----------TSCC-
T ss_pred hhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEE-EEccccc----------eecC-
Confidence 56899999999999999865 567788875321 1123366665333222222 3344332 2222
Q ss_pred cEEEEcCCcccccccccCCceEEEeCCCC
Q psy4436 127 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 127 ~~l~vgD~~~di~~a~~~G~~~i~v~~g~ 155 (171)
-++|+|++.++..+.+.|+.++++...+
T Consensus 139 -d~lIDD~p~n~~~~~~~g~~~il~~~~~ 166 (195)
T d1q92a_ 139 -DLLIDDRPDITGAEPTPSWEHVLFTACH 166 (195)
T ss_dssp -SEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred -eEEecCcHHHHHHHhcCCCeEEEECCCc
Confidence 2899999999999999999999996544
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.28 E-value=1.9e-06 Score=67.24 Aligned_cols=100 Identities=10% Similarity=0.142 Sum_probs=75.6
Q ss_pred eeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHh-c--------CcccccceeeEec-C----------------
Q psy4436 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-F--------NWNQHFDHKEIFP-G---------------- 108 (171)
Q Consensus 55 ~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~-~--------~l~~~fd~~~~~~-~---------------- 108 (171)
+...|.+...|++|+++|.++.++||++. ..+...+.. + .+.++||.+.... |
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~ 262 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE 262 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcH-HHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCC
Confidence 45578899999999999999999999988 776655555 2 5667888762210 1
Q ss_pred ------------Cc---HHHHHHHHHHhCCCCCcEEEEcCCcc-cccccc-cCCceEEEeCCCC
Q psy4436 109 ------------QK---TTHFANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKDGM 155 (171)
Q Consensus 109 ------------~k---~~~~~~~~~~~~~~~~~~l~vgD~~~-di~~a~-~~G~~~i~v~~g~ 155 (171)
++ ......+.+-+|..-.+++||||+.. ||..++ ..||.+++|-...
T Consensus 263 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 326 (458)
T d2bdea1 263 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 326 (458)
T ss_dssp TCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred CCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence 11 12356667778999899999999999 877665 4899999997765
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.09 E-value=0.034 Score=39.38 Aligned_cols=43 Identities=9% Similarity=0.073 Sum_probs=34.9
Q ss_pred CeeeeCCCHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcc
Q psy4436 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 97 (171)
Q Consensus 53 ~~~~~~~~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~ 97 (171)
....+.||+.+.++.|++. .+-+|+|.+-. +.++......|+.
T Consensus 78 ~~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~-qyi~al~~~~gfp 120 (308)
T d1y8aa1 78 LSAKFVPDAEKAMATLQER-WTPVVISTSYT-QYLRRTASMIGVR 120 (308)
T ss_dssp HHCCBCTTHHHHHHHHHTT-CEEEEEEEEEH-HHHHHHHHHTTCC
T ss_pred hceeecCCHHHHHHHHHhh-CCcEEEeccHH-HHHHHHHhhcCCC
Confidence 3567899999999999988 77777776655 7888788888886
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=92.34 E-value=0.13 Score=34.57 Aligned_cols=88 Identities=9% Similarity=-0.001 Sum_probs=53.6
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCcccccceeeEecCCcHHHHHHHHHHhCCCCCcEEEEcCCccccc
Q psy4436 60 DVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 139 (171)
Q Consensus 60 ~v~~~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~~~~~~~k~~~~~~~~~~~~~~~~~~l~vgD~~~di~ 139 (171)
++..+|..+++.+-++++++..+.......+-+-+++. +..+.-..++-.+..++++.-..-+ ++|||..- +.
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~-----i~~~~~~~~~e~~~~v~~l~~~G~~-vVVG~~~~-~~ 154 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR-----LDQRSYITEEDARGQINELKANGTE-AVVGAGLI-TD 154 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC-----EEEEEESSHHHHHHHHHHHHHTTCC-EEEESHHH-HH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCc-----eEEEEecCHHHHHHHHHHHHHCCCC-EEECChHH-HH
Confidence 35555666666788999998665545666676777766 2122211232233333333222223 45999865 57
Q ss_pred ccccCCceEEEeCCC
Q psy4436 140 DVSPLGVTCIHVKDG 154 (171)
Q Consensus 140 ~a~~~G~~~i~v~~g 154 (171)
.|++.|++++.+..|
T Consensus 155 ~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 155 LAEEAGMTGIFIYSA 169 (186)
T ss_dssp HHHHTTSEEEESSCH
T ss_pred HHHHcCCCEEEEeCH
Confidence 889999999999765
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=86.98 E-value=0.1 Score=38.94 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=13.3
Q ss_pred CcEEEEeCCCCCCCce
Q psy4436 16 PKLAVFDLDHTLWPFH 31 (171)
Q Consensus 16 ~k~vvfDlDgTL~~~~ 31 (171)
+|.|+||+||+|++.+
T Consensus 1 ~~~i~fd~dGVll~~~ 16 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEE 16 (380)
T ss_dssp CCEEEECSBTTTBCSH
T ss_pred CceEEEeCCcEEEcce
Confidence 4789999999998643
|
| >d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Sensor kinase protein RcsC, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.81 E-value=2.2 Score=26.21 Aligned_cols=95 Identities=12% Similarity=0.135 Sum_probs=54.8
Q ss_pred HHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-eE--ecCCcH-HHHHHHHHHhCCCCCcEEEE-cCCc-ccc
Q psy4436 65 LKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI--FPGQKT-THFANLKKATGIEYKDMVFF-DDEE-RNS 138 (171)
Q Consensus 65 l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~~--~~~~k~-~~~~~~~~~~~~~~~~~l~v-gD~~-~di 138 (171)
-..|+..|+.+..+++... +...+.... ||.+ -. .|...+ +..+++- +.+... .++++ +.+. .+.
T Consensus 25 ~~~L~~~g~~v~~a~~g~e---a~~~~~~~~----~dlillD~~mP~~dG~el~~~ir-~~~~~~-pii~lt~~~~~~~~ 95 (133)
T d2ayxa1 25 ADQLGSLGYQCKTANDGVD---ALNVLSKNH----IDIVLSDVNMPNMDGYRLTQRIR-QLGLTL-PVIGVTANALAEEK 95 (133)
T ss_dssp HHHHHHHTSEEEEECCSHH---HHHHHHHSC----CSEEEEEESSCSSCCHHHHHHHH-HHHCCS-CEEEEESSTTSHHH
T ss_pred HHHHHHcCCEEEEECcHHH---HHHHHhccC----ceEEEEeccCCCCCHHHHHHHHH-HhCCCC-CEEEEeccCCHHHH
Confidence 3456677999988888733 333555443 4444 11 343333 4445544 333332 35555 4333 367
Q ss_pred cccccCCceEEEeCCCCcHHHHHHHHHHhhh
Q psy4436 139 HDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 169 (171)
Q Consensus 139 ~~a~~~G~~~i~v~~g~~~~~~~~~~~~~~~ 169 (171)
..|.++|+..+..++ ++.+++...++.+.+
T Consensus 96 ~~~~~~G~~~~l~KP-~~~~~L~~~l~~~~~ 125 (133)
T d2ayxa1 96 QRCLESGMDSCLSKP-VTLDVIKQTLTLYAE 125 (133)
T ss_dssp HHHHHCCCEEEEESS-CCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECC-CCHHHHHHHHHHHHH
Confidence 888889999988875 566666666655543
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=81.65 E-value=3.1 Score=30.39 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=56.1
Q ss_pred HHHHHHHHhhC-CcEE-EEEcCCchhHHHHHHHHhcCccccccee-eEecCCcH-------HHHHHHHHHhCCCCCcEEE
Q psy4436 61 VPAILKYLKQN-NCLV-AAASRTTEMLRAHQLVDLFNWNQHFDHK-EIFPGQKT-------THFANLKKATGIEYKDMVF 130 (171)
Q Consensus 61 v~~~l~~L~~~-g~~i-~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~~~~~~k~-------~~~~~~~~~~~~~~~~~l~ 130 (171)
+..+++.|++. ++.+ .++|+... +......+.+++..-++.- ..-...-. ..+..++.+ .+|+=+++
T Consensus 18 l~pli~~l~~~~~~~~~li~tG~H~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~kpD~v~v 94 (377)
T d1o6ca_ 18 MAPLVLELKKYPEIDSYVTVTAQHR-QMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRLDELFKD--IKPDIVLV 94 (377)
T ss_dssp HHHHHHHGGGCTTEEEEEEECCSCG-GGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHH--HCCSEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCH-HHHHHHHhhcCCCCceeeecCCCCCCHHHHHHHHHHhhhhhhhh--cccceeEe
Confidence 45688999876 5555 55677643 5556677777775433211 11111111 113333433 36899999
Q ss_pred EcCCccc---ccccccCCceEEEeCCCC
Q psy4436 131 FDDEERN---SHDVSPLGVTCIHVKDGM 155 (171)
Q Consensus 131 vgD~~~d---i~~a~~~G~~~i~v~~g~ 155 (171)
+||+..- ..+|...|+..+++..|.
T Consensus 95 ~GDr~e~la~a~aa~~~~Ipi~HiegG~ 122 (377)
T d1o6ca_ 95 HGDTTTTFAGSLAAFYHQIAVGHVEAGL 122 (377)
T ss_dssp ETTCHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred eecccccchhhhhhhhccceEEEEeccc
Confidence 9999985 455666899999997643
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| >d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Transcriptional regulatory protein PrrA, N-terminal domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.29 E-value=3.9 Score=24.58 Aligned_cols=93 Identities=15% Similarity=0.024 Sum_probs=53.4
Q ss_pred HHHHHhhCCcEEEEEcCCchhHHHHHHHHhcCccccccee-eE--ecCCcH-HHHHHHHHHhCCCCCcEEEEcCC--ccc
Q psy4436 64 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI--FPGQKT-THFANLKKATGIEYKDMVFFDDE--ERN 137 (171)
Q Consensus 64 ~l~~L~~~g~~i~i~S~~~~~~~~~~~l~~~~l~~~fd~~-~~--~~~~k~-~~~~~~~~~~~~~~~~~l~vgD~--~~d 137 (171)
+-+.|+..|+.+..+++.. + +...++... +|.+ -. .|.-.. +..+++ ++.+-+ --++++-.. ..+
T Consensus 17 l~~~L~~~g~~v~~a~~~~--e-al~~~~~~~----~dlvl~D~~mP~~~G~el~~~i-r~~~~~-~piI~lt~~~~~~~ 87 (121)
T d1ys7a2 17 LERGLRLSGFEVATAVDGA--E-ALRSATENR----PDAIVLDINMPVLDGVSVVTAL-RAMDND-VPVCVLSARSSVDD 87 (121)
T ss_dssp HHHHHHHTTCEEEEESSHH--H-HHHHHHHSC----CSEEEEESSCSSSCHHHHHHHH-HHTTCC-CCEEEEECCCTTTC
T ss_pred HHHHHHHCCCEEEEECCHH--H-HHHHHHhCC----CCEEEEEeeccCcccHHHHHHH-HhcCCC-CEEEEEEeeCCHHH
Confidence 3456777899999888863 3 333555533 4444 12 233333 444444 444332 234554433 236
Q ss_pred ccccccCCceEEEeCCCCcHHHHHHHHHH
Q psy4436 138 SHDVSPLGVTCIHVKDGMSHSVLHKGLKQ 166 (171)
Q Consensus 138 i~~a~~~G~~~i~v~~g~~~~~~~~~~~~ 166 (171)
...|.++|+..+..+. ++.+++...+++
T Consensus 88 ~~~a~~~Ga~dyl~KP-~~~~~L~~~i~~ 115 (121)
T d1ys7a2 88 RVAGLEAGADDYLVKP-FVLAELVARVKA 115 (121)
T ss_dssp CCTTTTTTCSEEEESS-CCHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECC-CCHHHHHHHHHH
Confidence 7888899999998876 566666554443
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