Psyllid ID: psy4459

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKEGK
cccccccccccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHccccccccccccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccHHHHHHHHccccEEcccccccccccHHHHHHccccccEEEHHHHHHHHHHHHHHccccccEEEccccccccHHHHHHHHHcccccccccccccccccEEHHHHcccccEEEEHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHccccccccHHHHHHHHHHcccccccccc
ccccccccccccccHHccccHccccccEEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHcccccccccccHHHHHHcccccEEEEEEEEccccHHHccEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccEEEEEHcccccEEcccccccccccHHHHccccccccEEEEHHHHHHHHHcccccccccEEEEcccccccHHHHHHHHHHccccEcccccccccccHHEEEHcccccccEEEHHHHHHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHccccEEEEEEccccccccccccccccEEEcccEccccccEEEEEEEEEHHHHHHHHHHHHHcccccHHcccHHHHHHccccccccc
lecrrldlpedkidtYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKclapsyvgdfqldgktlrdeginridygsehgkkgshvskvhavpndnycafenWLMPILDTMLREQketgtvwtpsriisrlgmeinheDSICYWaahnhipifspaltdgslgdmmyfhsfrnpglicDILQDLRRLNTMAVKAVNTGMIILGgaeinhedSICYWaahnhipifspaltdgslgdmmyfhsfrnpglicDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTgveydgsdsgarpdeakswgkikrearpvkrngadYAVFINTgveydgsdsgarpdeakswgkikrearpvkegk
lecrrldlpedkidtyeeDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYgsehgkkgshVSKVHAVPNDNYCAFENWLMPILDTMLREQKetgtvwtpsriisrLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVeydgsdsgarpdeakswgkikrearpvkrngadYAVFINTgveydgsdsgarpdeakswgkikrearpvkegk
LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKEGK
************IDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYG********HVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEY****************************GADYAVFINTGVEY*****************************
*EC****LPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKE**TVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDS************************
LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYD*************WGKIKREARPVKRNGADYAVFINTGVEYD*************WGKIKR*********
**********DKID**EEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDSG***********************
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LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKEGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query400 2.2.26 [Sep-21-2011]
Q9VSF4368 Probable deoxyhypusine sy yes N/A 0.547 0.595 0.635 1e-84
Q6BJH5378 Deoxyhypusine synthase OS yes N/A 0.642 0.679 0.487 1e-80
Q6CNG7379 Deoxyhypusine synthase OS yes N/A 0.672 0.709 0.480 1e-79
Q75EW4382 Deoxyhypusine synthase OS yes N/A 0.667 0.698 0.469 3e-79
Q3TXU5369 Deoxyhypusine synthase OS yes N/A 0.48 0.520 0.635 2e-75
Q6AY53369 Deoxyhypusine synthase OS yes N/A 0.515 0.558 0.603 2e-75
P49366369 Deoxyhypusine synthase OS yes N/A 0.482 0.523 0.628 3e-75
Q54MQ7376 Probable deoxyhypusine sy yes N/A 0.547 0.582 0.579 8e-75
Q6EWQ6369 Deoxyhypusine synthase OS yes N/A 0.48 0.520 0.621 2e-74
Q9SC14371 Deoxyhypusine synthase OS N/A N/A 0.51 0.549 0.557 3e-67
>sp|Q9VSF4|DHYS_DROME Probable deoxyhypusine synthase OS=Drosophila melanogaster GN=CG8005 PE=2 SV=2 Back     alignment and function desciption
 Score =  313 bits (802), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/233 (63%), Positives = 179/233 (76%), Gaps = 14/233 (6%)

Query: 1   LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
           L+CR   L  D+ID++E D FI R+  CT+FLGYTSN+VSSG+RETI+FL +H+++D IV
Sbjct: 65  LDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTSNLVSSGLRETIRFLAEHRMIDCIV 124

Query: 61  TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
           TTAGGVEED IKCLAP+++G F+L G+ LR+ GINRI         G+ +     VPNDN
Sbjct: 125 TTAGGVEEDFIKCLAPTFMGSFELSGRDLRERGINRI---------GNLL-----VPNDN 170

Query: 121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
           YC FE+W+MP+LD ML EQK  GT+W+PS+II RLG  I    SI YWAA N IP+F PA
Sbjct: 171 YCKFEDWVMPLLDEMLEEQKSQGTIWSPSKIIHRLGERIGDPSSIYYWAAKNQIPVFCPA 230

Query: 181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINH 233
           LTDGSLGDMMYFHSFR PGL+ DIL DLRRLNTMAVKAVN+GMII+GG  I H
Sbjct: 231 LTDGSLGDMMYFHSFRQPGLVVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKH 283
Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 4EC: 6
>sp|Q6BJH5|DHYS_DEBHA Deoxyhypusine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DYS1 PE=3 SV=1 Back     alignment and function description
>sp|Q6CNG7|DHYS_KLULA Deoxyhypusine synthase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DYS1 PE=3 SV=1 Back     alignment and function description
>sp|Q75EW4|DHYS_ASHGO Deoxyhypusine synthase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYS1 PE=3 SV=1 Back     alignment and function description
>sp|Q3TXU5|DHYS_MOUSE Deoxyhypusine synthase OS=Mus musculus GN=Dhps PE=2 SV=2 Back     alignment and function description
>sp|Q6AY53|DHYS_RAT Deoxyhypusine synthase OS=Rattus norvegicus GN=Dhps PE=2 SV=1 Back     alignment and function description
>sp|P49366|DHYS_HUMAN Deoxyhypusine synthase OS=Homo sapiens GN=DHPS PE=1 SV=1 Back     alignment and function description
>sp|Q54MQ7|DHYS_DICDI Probable deoxyhypusine synthase OS=Dictyostelium discoideum GN=dhps PE=3 SV=1 Back     alignment and function description
>sp|Q6EWQ6|DHYS_BOVIN Deoxyhypusine synthase OS=Bos taurus GN=DHPS PE=2 SV=2 Back     alignment and function description
>sp|Q9SC14|DHYS_SENVE Deoxyhypusine synthase OS=Senecio vernalis GN=DHS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
328785635373 PREDICTED: probable deoxyhypusine syntha 0.695 0.745 0.527 2e-96
380020065373 PREDICTED: probable deoxyhypusine syntha 0.695 0.745 0.527 2e-96
170034044365 deoxyhypusine synthase [Culex quinquefas 0.517 0.567 0.737 1e-90
350425547373 PREDICTED: probable deoxyhypusine syntha 0.555 0.595 0.672 3e-90
312375511378 hypothetical protein AND_14070 [Anophele 0.555 0.587 0.682 1e-89
340728937373 PREDICTED: probable deoxyhypusine syntha 0.555 0.595 0.663 3e-89
444526348393 Deoxyhypusine synthase [Tupaia chinensis 0.717 0.730 0.493 6e-88
157128783363 deoxyhypusine synthase [Aedes aegypti] g 0.547 0.603 0.686 2e-87
383860456372 PREDICTED: probable deoxyhypusine syntha 0.555 0.596 0.651 2e-86
357610193371 deoxyhypusine synthase [Danaus plexippus 0.547 0.590 0.669 9e-86
>gi|328785635|ref|XP_003250628.1| PREDICTED: probable deoxyhypusine synthase-like [Apis mellifera] Back     alignment and taxonomy information
 Score =  359 bits (921), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 231/364 (63%), Gaps = 86/364 (23%)

Query: 1   LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
           +  R + L +D+IDT E+D FI RK +CTIFLGYTSNM S G+R+TI+FLVQHK++D IV
Sbjct: 73  INARNIPLEDDQIDTLEKDKFIKRKSSCTIFLGYTSNMASCGIRDTIRFLVQHKMIDCIV 132

Query: 61  TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
           TTAGGVEEDLIKCLAP+Y+GDF L+GK+LR  GINRI         G+ +     VPN+N
Sbjct: 133 TTAGGVEEDLIKCLAPTYIGDFHLEGKSLRQHGINRI---------GNLL-----VPNNN 178

Query: 121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
           YC FE+W+                                             IPI    
Sbjct: 179 YCLFEDWV---------------------------------------------IPILDEM 193

Query: 181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYW 240
           LT+    D+++  S           + + RL                G +IN+EDSI YW
Sbjct: 194 LTEQKTKDILWTPS-----------KVITRL----------------GEKINNEDSIYYW 226

Query: 241 AAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGG 300
           AA N IP+FSPALTDGSLGDMMYFHSFRNPGLI DI+ DLRRLNTMA+KAV +GMII+GG
Sbjct: 227 AAKNKIPVFSPALTDGSLGDMMYFHSFRNPGLIIDIISDLRRLNTMAMKAVKSGMIIIGG 286

Query: 301 GVIKHHICNANLMRNGADYAVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGAD 360
           GV+KHHICNANLMRNGADY+VFINT  E+DGSDSGARPDEA SWGKI+ +A+PVK     
Sbjct: 287 GVVKHHICNANLMRNGADYSVFINTASEFDGSDSGARPDEAISWGKIRMDAKPVKIYAEA 346

Query: 361 YAVF 364
             VF
Sbjct: 347 SLVF 350

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|380020065|ref|XP_003693918.1| PREDICTED: probable deoxyhypusine synthase-like [Apis florea] Back     alignment and taxonomy information
>gi|170034044|ref|XP_001844885.1| deoxyhypusine synthase [Culex quinquefasciatus] gi|167875293|gb|EDS38676.1| deoxyhypusine synthase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|350425547|ref|XP_003494156.1| PREDICTED: probable deoxyhypusine synthase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|312375511|gb|EFR22872.1| hypothetical protein AND_14070 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|340728937|ref|XP_003402768.1| PREDICTED: probable deoxyhypusine synthase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|444526348|gb|ELV14299.1| Deoxyhypusine synthase [Tupaia chinensis] Back     alignment and taxonomy information
>gi|157128783|ref|XP_001661519.1| deoxyhypusine synthase [Aedes aegypti] gi|108872471|gb|EAT36696.1| AAEL011245-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|383860456|ref|XP_003705705.1| PREDICTED: probable deoxyhypusine synthase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|357610193|gb|EHJ66865.1| deoxyhypusine synthase [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
FB|FBgn0035854368 CG8005 [Drosophila melanogaste 0.555 0.603 0.630 3.4e-94
RGD|1303326369 Dhps "deoxyhypusine synthase" 0.515 0.558 0.603 3.5e-86
DICTYBASE|DDB_G0285725376 dhps "deoxyhypusine synthase" 0.487 0.518 0.630 3.5e-86
MGI|MGI:2683592369 Dhps "deoxyhypusine synthase" 0.48 0.520 0.635 5.7e-86
UNIPROTKB|P49366369 DHPS "Deoxyhypusine synthase" 0.482 0.523 0.628 1.2e-85
UNIPROTKB|E2RRL4369 DHPS "Uncharacterized protein" 0.48 0.520 0.631 1.5e-85
ZFIN|ZDB-GENE-040426-2001361 dhps "deoxyhypusine synthase" 0.48 0.531 0.640 1.9e-85
UNIPROTKB|F1SEX8369 DHPS "Uncharacterized protein" 0.48 0.520 0.626 2.4e-85
UNIPROTKB|Q6EWQ6369 DHPS "Deoxyhypusine synthase" 0.535 0.579 0.583 4e-85
TAIR|locus:2153664368 DHS "deoxyhypusine synthase" [ 0.487 0.529 0.591 5.2e-79
FB|FBgn0035854 CG8005 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 776 (278.2 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
 Identities = 150/238 (63%), Positives = 181/238 (76%)

Query:     1 LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
             L+CR   L  D+ID++E D FI R+  CT+FLGYTSN+VSSG+RETI+FL +H+++D IV
Sbjct:    65 LDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTSNLVSSGLRETIRFLAEHRMIDCIV 124

Query:    61 TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
             TTAGGVEED IKCLAP+++G F+L G+ LR+ GINRI         G+ +     VPNDN
Sbjct:   125 TTAGGVEEDFIKCLAPTFMGSFELSGRDLRERGINRI---------GNLL-----VPNDN 170

Query:   121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
             YC FE+W+MP+LD ML EQK  GT+W+PS+II RLG  I    SI YWAA N IP+F PA
Sbjct:   171 YCKFEDWVMPLLDEMLEEQKSQGTIWSPSKIIHRLGERIGDPSSIYYWAAKNQIPVFCPA 230

Query:   181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSIC 238
             LTDGSLGDMMYFHSFR PGL+ DIL DLRRLNTMAVKAVN+GMII+GG  I H   IC
Sbjct:   231 LTDGSLGDMMYFHSFRQPGLVVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHH--IC 286
GO:0050983 "deoxyhypusine biosynthetic process from spermidine" evidence=NAS
GO:0008612 "peptidyl-lysine modification to hypusine" evidence=ISS
RGD|1303326 Dhps "deoxyhypusine synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285725 dhps "deoxyhypusine synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:2683592 Dhps "deoxyhypusine synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P49366 DHPS "Deoxyhypusine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RRL4 DHPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2001 dhps "deoxyhypusine synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SEX8 DHPS "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q6EWQ6 DHPS "Deoxyhypusine synthase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2153664 DHS "deoxyhypusine synthase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VSF4DHYS_DROME2, ., 5, ., 1, ., 4, 60.63510.54750.5951yesN/A
Q6CNG7DHYS_KLULA2, ., 5, ., 1, ., 4, 60.48090.67250.7097yesN/A
Q9FI94DHYS_ARATH2, ., 5, ., 1, ., 4, 60.59610.480.5217yesN/A
Q6CG56DHYS_YARLI2, ., 5, ., 1, ., 4, 60.56520.47750.5520yesN/A
P49366DHYS_HUMAN2, ., 5, ., 1, ., 4, 60.62800.48250.5230yesN/A
Q6AY53DHYS_RAT2, ., 5, ., 1, ., 4, 60.60360.5150.5582yesN/A
Q54MQ7DHYS_DICDI2, ., 5, ., 1, ., 4, 60.57980.54750.5824yesN/A
P38791DHYS_YEAST2, ., 5, ., 1, ., 4, 60.53530.4850.5012yesN/A
Q9XXJ0DHYS_CAEEL2, ., 5, ., 1, ., 4, 60.57810.490.5283yesN/A
Q6FRN2DHYS_CANGA2, ., 5, ., 1, ., 4, 60.52210.4850.5038yesN/A
Q3TXU5DHYS_MOUSE2, ., 5, ., 1, ., 4, 60.63590.480.5203yesN/A
Q6BJH5DHYS_DEBHA2, ., 5, ., 1, ., 4, 60.48790.64250.6798yesN/A
Q75EW4DHYS_ASHGO2, ., 5, ., 1, ., 4, 60.46930.66750.6989yesN/A
O94337DHYS_SCHPO2, ., 5, ., 1, ., 4, 60.57600.49750.5685yesN/A
Q6EWQ6DHYS_BOVIN2, ., 5, ., 1, ., 4, 60.62130.480.5203yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.5.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
pfam01916297 pfam01916, DS, Deoxyhypusine synthase 2e-92
TIGR00321301 TIGR00321, dhys, deoxyhypusine synthase 3e-68
PRK03971334 PRK03971, PRK03971, putative deoxyhypusine synthas 1e-66
pfam01916297 pfam01916, DS, Deoxyhypusine synthase 2e-66
COG1899318 COG1899, DYS1, Deoxyhypusine synthase [Posttransla 9e-66
COG1899318 COG1899, DYS1, Deoxyhypusine synthase [Posttransla 5e-55
TIGR00321301 TIGR00321, dhys, deoxyhypusine synthase 2e-50
PRK03971334 PRK03971, PRK03971, putative deoxyhypusine synthas 2e-47
PRK01221312 PRK01221, PRK01221, putative deoxyhypusine synthas 2e-39
PRK01221312 PRK01221, PRK01221, putative deoxyhypusine synthas 5e-33
PRK00805329 PRK00805, PRK00805, putative deoxyhypusine synthas 3e-19
PRK02301316 PRK02301, PRK02301, putative deoxyhypusine synthas 5e-16
PRK02301316 PRK02301, PRK02301, putative deoxyhypusine synthas 9e-16
PRK00805329 PRK00805, PRK00805, putative deoxyhypusine synthas 4e-15
PRK02492347 PRK02492, PRK02492, deoxyhypusine synthase-like pr 4e-12
PRK02492347 PRK02492, PRK02492, deoxyhypusine synthase-like pr 1e-11
PRK00770384 PRK00770, PRK00770, deoxyhypusine synthase-like pr 7e-07
>gnl|CDD|145208 pfam01916, DS, Deoxyhypusine synthase Back     alignment and domain information 
 Score =  279 bits (716), Expect = 2e-92
 Identities = 122/206 (59%), Positives = 151/206 (73%), Gaps = 14/206 (6%)

Query: 28  CTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGK 87
            TIFLGYTSN++SSG+RE I++LVQHK + A+VTTAGGVEEDLIKCL P+Y+GDF++D K
Sbjct: 38  ITIFLGYTSNLISSGMREIIRYLVQHKKISALVTTAGGVEEDLIKCLGPTYLGDFEVDDK 97

Query: 88  TLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWT 147
            LR+EGINRI         G+       VPN+NY AFE WLMPI + ML EQ++ G +WT
Sbjct: 98  ELREEGINRI---------GNVF-----VPNENYEAFEEWLMPIFEKMLEEQEKEGKIWT 143

Query: 148 PSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQD 207
           PS  I  LG EIN E S+ YWA  N+IPIF PALTDGSLGDM+YF++ +NP L  DI+ D
Sbjct: 144 PSEFIHELGKEINDERSVLYWAHKNNIPIFCPALTDGSLGDMLYFYTKKNPKLRIDIVND 203

Query: 208 LRRLNTMAVKAVNTGMIILGGAEINH 233
           +R++N +A  A  TGMIILGG    H
Sbjct: 204 IRKINDLAFSAKRTGMIILGGGLPKH 229

Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalyzed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation. Length = 297
>gnl|CDD|232918 TIGR00321, dhys, deoxyhypusine synthase Back     alignment and domain information
>gnl|CDD|179688 PRK03971, PRK03971, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|145208 pfam01916, DS, Deoxyhypusine synthase Back     alignment and domain information
>gnl|CDD|224811 COG1899, DYS1, Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|224811 COG1899, DYS1, Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|232918 TIGR00321, dhys, deoxyhypusine synthase Back     alignment and domain information
>gnl|CDD|179688 PRK03971, PRK03971, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|234922 PRK01221, PRK01221, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|234922 PRK01221, PRK01221, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|234841 PRK00805, PRK00805, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|235027 PRK02301, PRK02301, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|235027 PRK02301, PRK02301, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|234841 PRK00805, PRK00805, putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>gnl|CDD|235043 PRK02492, PRK02492, deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|235043 PRK02492, PRK02492, deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|179117 PRK00770, PRK00770, deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 400
KOG2924|consensus366 100.0
PRK03971334 putative deoxyhypusine synthase; Provisional 100.0
TIGR00321301 dhys deoxyhypusine synthase. This family of appare 100.0
PRK01221312 putative deoxyhypusine synthase; Provisional 100.0
PRK02301316 putative deoxyhypusine synthase; Provisional 100.0
COG1899318 DYS1 Deoxyhypusine synthase [Posttranslational mod 100.0
PRK00805329 putative deoxyhypusine synthase; Provisional 100.0
PF01916299 DS: Deoxyhypusine synthase; InterPro: IPR002773 Eu 100.0
PRK02492347 deoxyhypusine synthase-like protein; Provisional 100.0
PRK00770384 deoxyhypusine synthase-like protein; Provisional 100.0
KOG2924|consensus366 99.8
PRK00770384 deoxyhypusine synthase-like protein; Provisional 99.75
COG1899318 DYS1 Deoxyhypusine synthase [Posttranslational mod 99.55
PRK01221312 putative deoxyhypusine synthase; Provisional 99.54
TIGR00321301 dhys deoxyhypusine synthase. This family of appare 99.48
PRK02301316 putative deoxyhypusine synthase; Provisional 99.46
PRK03971334 putative deoxyhypusine synthase; Provisional 99.46
PRK02492347 deoxyhypusine synthase-like protein; Provisional 99.45
PRK00805329 putative deoxyhypusine synthase; Provisional 99.44
PF01916299 DS: Deoxyhypusine synthase; InterPro: IPR002773 Eu 99.19
TIGR00300407 conserved hypothetical protein TIGR00300. All memb 95.66
COG1915415 Uncharacterized conserved protein [Function unknow 88.72
>KOG2924|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.4e-106  Score=775.37  Aligned_cols=292  Identities=65%  Similarity=1.057  Sum_probs=266.1

Q ss_pred             ccccCCCCCCccCcccchhhhhccCCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCchhHHHHHhhcCccccc
Q psy4459           2 ECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGD   81 (400)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~lehDi~~~~~~~y~g~   81 (400)
                      ..|++|+..|+...+...+..|....||||||||+|++|||+|++|++|+||++|||||||+|+||||+||||+|+|.|+
T Consensus        71 ~~rd~~~~~d~d~~~~~~~~~r~~~~ctIFlGyTSNliSSGlRetirylvqh~mVdviVttaGGvEEDlIKclaPTy~g~  150 (366)
T KOG2924|consen   71 NWRDEPLSADDDSHEDLTFSRRPLTSCTIFLGYTSNLISSGLRETIRYLVQHNMVDVIVTTAGGVEEDLIKCLAPTYLGD  150 (366)
T ss_pred             hcccCccccccccccccCcccccccceEEEEecchhhhhhhHHHHHHHHHHhcceeEEEecCCccHHHHHHHhCccceee
Confidence            56888998777445555556666788999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCchhHHhcCccccccCCCCCCCCCCcccceeecCccHHHHHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhcccCC
Q psy4459          82 FQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINH  161 (400)
Q Consensus        82 ~~~dd~~L~~~ginRi~~~~~~~~~~~~~~~d~~ip~e~~~~~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i~~  161 (400)
                      |.+++++||++|+||||              |++|||||||+||+|++|||++|+++|+..+..||||+||++|||+|++
T Consensus       151 F~L~G~~LR~~GlNRiG--------------NllvPndNYckfEdWl~pIld~mleeq~~~~~iwTPSk~I~rlGk~Ind  216 (366)
T KOG2924|consen  151 FSLDGKELRENGLNRIG--------------NLLVPNDNYCKFEDWLMPILDEMLEEQKTEGVIWTPSKMIARLGKEIND  216 (366)
T ss_pred             eecChHHHHhhhhhhhc--------------cEecCCcchhhHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhhCC
Confidence            99999999999999999              9999999999999999999999999999989999999999999999999


Q ss_pred             CccHhHhhhhcCCCccCCCccCCCccccceeecccCCCchhHHHHHHHHHhHhhhhccccceeeecCcccCCCchHhhHh
Q psy4459         162 EDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWA  241 (400)
Q Consensus       162 e~Sil~wAyk~~vPif~Pa~~D~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~~~s~~~~~i~~~G~~i~~e~Sil~~A  241 (400)
                      ++||+||||||+|||||||+|||                                                         
T Consensus       217 esSvlYWA~Kn~IPvf~PaltDG---------------------------------------------------------  239 (366)
T KOG2924|consen  217 ESSVLYWAAKNHIPVFSPALTDG---------------------------------------------------------  239 (366)
T ss_pred             ccceeehhhhCCCceecccccCC---------------------------------------------------------
Confidence            99999998885555555555555                                                         


Q ss_pred             hhCCCceecCCCCchhHhHHHHHhhhcCCcceeeHHHHHHHHHHHHhhcccceeEEecCccchhhhhhhcccccCcceEE
Q psy4459         242 AHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAV  321 (400)
Q Consensus       242 ~k~~vPVf~Pa~~DgsiG~~l~~~~~~~~~l~~D~~~D~~~l~~~~~~s~~~G~iilGGGv~Kh~i~~a~l~r~g~dyav  321 (400)
                                     |+|+|||||+++.++|.+|+++|++++|.+++.|.++|+||+||||+|||||||||||||+||+|
T Consensus       240 ---------------SlGDmlyFHs~k~~~L~~DIv~Dir~iNt~av~a~~tgmIIlGgGvvKHHI~NAnLmrNGad~~V  304 (366)
T KOG2924|consen  240 ---------------SLGDMLYFHSFKNSGLVLDIVEDIRRINTEAVFANKTGMIILGGGVVKHHICNANLMRNGADYAV  304 (366)
T ss_pred             ---------------cccceEEEeeccCCCeEEeHHHHHHhhhhhhhhccccceEEEcCchhhhhcchhhhhhcCcceEE
Confidence                           55555555555567899999999999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccCCcCCCChhhhhhhcccccCCCCeEEeccceeEeecccccccCCCCCCC
Q psy4459         322 FINTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGSDSGAR  379 (400)
Q Consensus       322 ~itta~e~dGs~SGA~p~EaisWGKik~~~~~v~V~gDaTiv~Pll~~~~~gs~sGar  379 (400)
                      ||||+||||||+|||+|+||||||||++++++||||+|||+|||+++++.+...-.+-
T Consensus       305 yINtaqEfDGSDsGArpDEAVSWGKir~~a~~VKvy~datlvfPLlVaeTFa~~~~~~  362 (366)
T KOG2924|consen  305 YINTAQEFDGSDSGARPDEAVSWGKIRPDAKPVKVYADATLVFPLLVAETFAKKMDAF  362 (366)
T ss_pred             EecccccccCcccCCCcccccccccccCCCceEEEEeeeeehhHHHHHHHHHhcCCcc
Confidence            9999999999999999999999999999999999999999999999999887765553

>PRK03971 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>TIGR00321 dhys deoxyhypusine synthase Back     alignment and domain information
>PRK01221 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>PRK02301 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00805 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>PF01916 DS: Deoxyhypusine synthase; InterPro: IPR002773 Eukaryotic initiation factor 5A (eIF-5A), now considered to be an elongation factor (see IPR001884 from INTERPRO), contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine] Back     alignment and domain information
>PRK02492 deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>PRK00770 deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>KOG2924|consensus Back     alignment and domain information
>PRK00770 deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01221 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>TIGR00321 dhys deoxyhypusine synthase Back     alignment and domain information
>PRK02301 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>PRK03971 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>PRK02492 deoxyhypusine synthase-like protein; Provisional Back     alignment and domain information
>PRK00805 putative deoxyhypusine synthase; Provisional Back     alignment and domain information
>PF01916 DS: Deoxyhypusine synthase; InterPro: IPR002773 Eukaryotic initiation factor 5A (eIF-5A), now considered to be an elongation factor (see IPR001884 from INTERPRO), contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine] Back     alignment and domain information
>TIGR00300 conserved hypothetical protein TIGR00300 Back     alignment and domain information
>COG1915 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
1rlz_A369 Deoxyhypusine Synthase Holoenzyme In Its High Ionic 2e-76
1rlz_A369 Deoxyhypusine Synthase Holoenzyme In Its High Ionic 9e-56
1dhs_A361 Crystal Structure Of The Nad Complex Of Human Deoxy 3e-76
1dhs_A361 Crystal Structure Of The Nad Complex Of Human Deoxy 1e-55
>pdb|1RLZ|A Chain A, Deoxyhypusine Synthase Holoenzyme In Its High Ionic Strength, Low Ph Crystal Form Length = 369 Back     alignment and structure 
Iteration: 1

 Score =  282 bits (722), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 130/207 (62%), Positives = 164/207 (79%), Gaps = 14/207 (6%)
Query: 27  NCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDG 86
           +CTIFLGYTSN++SSG+RETI++LVQH +VD +VTTAGGVEEDLIKCLAP+Y+G+F L G
Sbjct: 96  SCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRG 155
Query: 87  KTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVW 146
           K LR+ GINRI         G+ +     VPN+NYC FE+WLMPILD M+ EQ   G  W
Sbjct: 156 KELRENGINRI---------GNLL-----VPNENYCKFEDWLMPILDQMVMEQNTEGVKW 201
Query: 147 TPSRIISRLGMEINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQ 206
           TPS++I+RLG EIN+ +S+ YWA  NHIP+FSPALTDGSLGDM++FHS++NPGL+ DI++
Sbjct: 202 TPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVE 261
Query: 207 DLRRLNTMAVKAVNTGMIILGGAEINH 233
           DLR +NT A+ A  TGMIILGG  + H
Sbjct: 262 DLRLINTQAIFAKCTGMIILGGGVVKH 288
>pdb|1RLZ|A Chain A, Deoxyhypusine Synthase Holoenzyme In Its High Ionic Strength, Low Ph Crystal Form Length = 369 Back     alignment and structure
>pdb|1DHS|A Chain A, Crystal Structure Of The Nad Complex Of Human Deoxyhypusine Synthase Length = 361 Back     alignment and structure
>pdb|1DHS|A Chain A, Crystal Structure Of The Nad Complex Of Human Deoxyhypusine Synthase Length = 361 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
1rlz_A369 DHS, deoxyhypusine synthase; rossman fold, NAD cof 1e-56
1rlz_A369 DHS, deoxyhypusine synthase; rossman fold, NAD cof 6e-41
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A* Length = 369 Back     alignment and structure
 Score =  189 bits (480), Expect = 1e-56
 Identities = 132/233 (56%), Positives = 169/233 (72%), Gaps = 14/233 (6%)

Query: 1   LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
           +E +   L +D+    +         +CTIFLGYTSN++SSG+RETI++LVQH +VD +V
Sbjct: 70  IEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLV 129

Query: 61  TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
           TTAGGVEEDLIKCLAP+Y+G+F L GK LR+ GINRI                  VPN+N
Sbjct: 130 TTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRI--------------GNLLVPNEN 175

Query: 121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
           YC FE+WLMPILD M+ EQ   G  WTPS++I+RLG EIN+ +S+ YWA  NHIP+FSPA
Sbjct: 176 YCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPA 235

Query: 181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINH 233
           LTDGSLGDM++FHS++NPGL+ DI++DLR +NT A+ A  TGMIILGG  + H
Sbjct: 236 LTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKH 288
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A* Length = 369 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
1rlz_A369 DHS, deoxyhypusine synthase; rossman fold, NAD cof 100.0
1rlz_A369 DHS, deoxyhypusine synthase; rossman fold, NAD cof 99.55
3c2q_A345 Uncharacterized conserved protein; putative LOR/SD 96.13
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-100  Score=764.39  Aligned_cols=283  Identities=63%  Similarity=1.053  Sum_probs=257.2

Q ss_pred             ccCCCCCCccCcccc-hhhhhccCCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCchhHHHHHhhcCcccccc
Q psy4459           4 RRLDLPEDKIDTYEE-DLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDF   82 (400)
Q Consensus         4 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~lehDi~~~~~~~y~g~~   82 (400)
                      |..+.+|+. ++.++ +++.|++.+|||||||||||+|||||++|++|||+|+||||||||||||||++||+++||+|+|
T Consensus        73 r~~~~~~~~-~~~~~~d~~~~~~~~~tIFLg~tgnmissGlR~iI~~Li~~~~VDvIVTTgggiehD~ik~lg~~y~G~f  151 (369)
T 1rlz_A           73 KLEPLSQDE-DQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEF  151 (369)
T ss_dssp             HTCCC------------------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCT
T ss_pred             hccCccccc-cccccccchhcccCCCeEEEEccccccchhHHHHHHHHHHcCCeeEEEccCCchHHHHHHHhccceecCC
Confidence            445555443 44455 7788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCchhHHhcCccccccCCCCCCCCCCcccceeecCccHHHHHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhcccCCC
Q psy4459          83 QLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHE  162 (400)
Q Consensus        83 ~~dd~~L~~~ginRi~~~~~~~~~~~~~~~d~~ip~e~~~~~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i~~e  162 (400)
                      .+||.+||++|+||||              |++|||++||+||+||+++|++|.++|++.+.+|||+||+++|||+|+++
T Consensus       152 ~~dd~~Lr~~ginRIg--------------n~~ip~e~y~~~E~~i~~i~~~~~~~q~~~~~~~s~~e~i~~lGk~i~~e  217 (369)
T 1rlz_A          152 SLRGKELRENGINRIG--------------NLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNP  217 (369)
T ss_dssp             TCCHHHHHHTTEEEET--------------TEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCT
T ss_pred             CCChHHHHHcCCCccc--------------ceeeccHHHHHHHHHHHHHHHHHHHhhhccCCcCcHHHHHHHHhhhcCCC
Confidence            9999999999999999              99999999999999999999999998887788999999999999999887


Q ss_pred             ccHhHhhhhcCCCccCCCccCCCccccceeecccCCCchhHHHHHHHHHhHhhhhccccceeeecCcccCCCchHhhHhh
Q psy4459         163 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAA  242 (400)
Q Consensus       163 ~Sil~wAyk~~vPif~Pa~~D~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~~~s~~~~~i~~~G~~i~~e~Sil~~A~  242 (400)
                      +||+|||||                                                                       
T Consensus       218 ~Sil~~Ayk-----------------------------------------------------------------------  226 (369)
T 1rlz_A          218 ESVYYWAQK-----------------------------------------------------------------------  226 (369)
T ss_dssp             TCHHHHHHH-----------------------------------------------------------------------
T ss_pred             CcHHHHHHH-----------------------------------------------------------------------
Confidence            777777766                                                                       


Q ss_pred             hCCCceecCCCCchhHhHHHHHhhhcCCcceeeHHHHHHHHHHHHhhcccceeEEecCccchhhhhhhcccccCcceEEE
Q psy4459         243 HNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVF  322 (400)
Q Consensus       243 k~~vPVf~Pa~~DgsiG~~l~~~~~~~~~l~~D~~~D~~~l~~~~~~s~~~G~iilGGGv~Kh~i~~a~l~r~g~dyav~  322 (400)
                       |||||||||++|||+|+++|+|++++|++.+|+++|+++|++++++|+++|+|||||||||||||||||||+|+|||||
T Consensus       227 -~~VPVf~Pa~tDgsiG~~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a~ktG~iilGGGvpKh~i~~a~l~r~G~dyaV~  305 (369)
T 1rlz_A          227 -NHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVY  305 (369)
T ss_dssp             -TTCCEECTTTTSSHHHHHHHHHHHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHTTTSBSEEEE
T ss_pred             -cCCCEECCCcchhhHHHHHHHHhccCCceeeehHhhHHHHHHHHHhcccceEEEECCCcchHHHHhhhcccCCCCEEEE
Confidence             8999999999999999999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccCCcCCCChhhhhhhcccccCCCCeEEeccceeEeecccccccC
Q psy4459         323 INTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDG  373 (400)
Q Consensus       323 itta~e~dGs~SGA~p~EaisWGKik~~~~~v~V~gDaTiv~Pll~~~~~g  373 (400)
                      |||++|+|||||||||+||||||||+++++.|+|||||||+|||++++++.
T Consensus       306 Itta~e~dGslSGA~p~EAvSWGKi~~~a~~v~V~~DATIv~PLlva~~~~  356 (369)
T 1rlz_A          306 INTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFA  356 (369)
T ss_dssp             EECCCSTTCCSTTCCHHHHHHHTSBCTTCCCEEEESCHHHHHHHHHHHTGG
T ss_pred             EecCCCCcCcccCCChhhhhccccccCCCCeEEEEEeehHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998883
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A* Back     alignment and structure
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 400
d1dhsa_361 c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human ( 5e-74
d1dhsa_361 c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human ( 9e-57
>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Length = 361 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Deoxyhypusine synthase, DHS
domain: Deoxyhypusine synthase, DHS
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  232 bits (594), Expect = 5e-74
 Identities = 132/228 (57%), Positives = 170/228 (74%), Gaps = 14/228 (6%)

Query: 1   LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
           +E +   L +D+    +         +CTIFLGYTSN++SSG+RETI++LVQH +VD +V
Sbjct: 62  IEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLV 121

Query: 61  TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
           TTAGGVEEDLIKCLAP+Y+G+F L GK LR+ GINRI         G+ +     VPN+N
Sbjct: 122 TTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRI---------GNLL-----VPNEN 167

Query: 121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
           YC FE+WLMPILD M+ EQ   G  WTPS++I+RLG EIN+ +S+ YWA  NHIP+FSPA
Sbjct: 168 YCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPA 227

Query: 181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGG 228
           LTDGSLGDM++FHS++NPGL+ DI++DLR +NT A+ A  TGMIILGG
Sbjct: 228 LTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGG 275
>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Length = 361 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
d1dhsa_361 Deoxyhypusine synthase, DHS {Human (Homo sapiens) 100.0
d1dhsa_361 Deoxyhypusine synthase, DHS {Human (Homo sapiens) 99.42
>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Deoxyhypusine synthase, DHS
domain: Deoxyhypusine synthase, DHS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-96  Score=733.43  Aligned_cols=286  Identities=62%  Similarity=1.027  Sum_probs=258.6

Q ss_pred             cccCCCCCCccCcccchhhhhccCCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCchhHHHHHhhcCcccccc
Q psy4459           3 CRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDF   82 (400)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~lehDi~~~~~~~y~g~~   82 (400)
                      +|..|.++++..+.+.+++.++..+|||||||||||++||||++|++|||+|+||+|||||||||||++||+++||+|+|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f  143 (361)
T d1dhsa_          64 KKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEF  143 (361)
T ss_dssp             HHTCCC-----------------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCT
T ss_pred             hhccCCcccccccccccchhcccccceEEEecccccchhhHHHHHHHHHHcCCCCEEEecCCcchHHHHHHhCccccCcc
Confidence            34566666665667788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCchhHHhcCccccccCCCCCCCCCCcccceeecCccHHHHHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhcccCCC
Q psy4459          83 QLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHE  162 (400)
Q Consensus        83 ~~dd~~L~~~ginRi~~~~~~~~~~~~~~~d~~ip~e~~~~~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i~~e  162 (400)
                      .+||.+||++|+||||              |++|||++|++||+|++++++++.++|+..+.+|+|+||+++||++|+++
T Consensus       144 ~~dd~~Lr~~ginRIg--------------dv~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~  209 (361)
T d1dhsa_         144 SLRGKELRENGINRIG--------------NLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNP  209 (361)
T ss_dssp             TCCHHHHHHTTEEEET--------------TEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCT
T ss_pred             cCChHHHhhcCccccc--------------ceeeCHHHHHHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHhccCCc
Confidence            9999999999999999              99999999999999999999999999998889999999999999999877


Q ss_pred             ccHhHhhhhcCCCccCCCccCCCccccceeecccCCCchhHHHHHHHHHhHhhhhccccceeeecCcccCCCchHhhHhh
Q psy4459         163 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAA  242 (400)
Q Consensus       163 ~Sil~wAyk~~vPif~Pa~~D~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~~~s~~~~~i~~~G~~i~~e~Sil~~A~  242 (400)
                      +||+|||||                                                                       
T Consensus       210 ~Sil~~A~~-----------------------------------------------------------------------  218 (361)
T d1dhsa_         210 ESVYYWAQK-----------------------------------------------------------------------  218 (361)
T ss_dssp             TCHHHHHHH-----------------------------------------------------------------------
T ss_pred             chHHHHHHH-----------------------------------------------------------------------
Confidence            776666665                                                                       


Q ss_pred             hCCCceecCCCCchhHhHHHHHhhhcCCcceeeHHHHHHHHHHHHhhcccceeEEecCccchhhhhhhcccccCcceEEE
Q psy4459         243 HNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVF  322 (400)
Q Consensus       243 k~~vPVf~Pa~~DgsiG~~l~~~~~~~~~l~~D~~~D~~~l~~~~~~s~~~G~iilGGGv~Kh~i~~a~l~r~g~dyav~  322 (400)
                       |||||||||++|||+|+++++|+++++++.+|+++|+++|++++++++++|+|+|||||||||+||+||+|+|+||+||
T Consensus       219 -~~vPVf~Pa~~DssiG~~l~~~~~~~~~~~iD~~~D~~~l~~~~~~~~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavq  297 (361)
T d1dhsa_         219 -NHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVY  297 (361)
T ss_dssp             -TTCCEECTTTTSSHHHHHHHHHHHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCTHHHHHHHHHHHTTTSBSEEEE
T ss_pred             -hCCCeecCCcchhhHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHhccCcceEEEeCCcccHHHHhhhhhcCCCCEEEE
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccCCcCCCChhhhhhhcccccCCCCeEEeccceeEeecccccccCC
Q psy4459         323 INTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDGS  374 (400)
Q Consensus       323 itta~e~dGs~SGA~p~EaisWGKik~~~~~v~V~gDaTiv~Pll~~~~~gs  374 (400)
                      |||++|+|||||||||+||||||||+++++.|+||||||||||||+++.+..
T Consensus       298 Itta~~~dGslSGA~p~EaiSWGKi~~~a~~v~V~~DATIv~PLl~a~~~~k  349 (361)
T d1dhsa_         298 INTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQ  349 (361)
T ss_dssp             ECCCCSTTCCSTTCCHHHHHHHTSBCTTCCCEEECSCHHHHHHHHHHHTGGG
T ss_pred             EeCCCCCcCcccCCCcccccccCccCCCCCcEEEEeeHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999987743
>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure