Psyllid ID: psy4509

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MRNPSPKEAKLFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
cccccccccEEEEEEEcccccccccccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccEEEEEcccccEEEEEcccccEEEEEEEcEEEcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHcccHHHHHHHHccccccccccEEEEEEccccccEEEEEEccccEEEEEccEEEEEccccccccccccccccccccccccccccccEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccccccEEEEEEEEEc
cccccccccEEEEEEcccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccccccccEEEEEcccccEEEEEccccccEEEEEcccccHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHcccccccEEEEEEEEccccEEEEEEEccccEEEEEccEEEEEccccEcccccccEcccccccccccccccccEEEEEccccEEEEEcccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccccccccEEEEEEEEEc
MRNPSPKEAKLFsavsgipkdfsnnkmfqlnkygddayftARYKTADVLEFSSFLMKTCERLVtsgrfscteptSLLARSYYELLEnkqpilgssTACIVILNKETSTLCTANIGNSIVRVADgvggwrnygidpgefSSFLMKTCERLVtsgrfscteptSLLARSYYELLEnkqpilgssTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKetstlytanigdsGFVIVRRGkvihrseeqqhyfntpfqlslpplshttQVLESCKrrglvvhgDVILLAtdgvfdnvpdSLLLAELVRAqgskdpmqLQLVANTIALMARTLafdetymspFAIQARAngistqggkpddITVLLAIVAL
mrnpspkeaklfsavsgipkdfsnnKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVtsgrfscteptSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTsgrfscteptSLLARSYYELLenkqpilgsSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKetstlytanigdsGFVIVRRGKVIHRSEEQQHYfntpfqlslppLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAqgskdpmqLQLVANTIALMARTLAFDETYMSPFAIQARAngistqggkpdDITVLLAIVAL
MRNPSPKEAKLFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
********************DFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIV**
************SAVSGIPKD*********NKYGDDAYFTARYKTADVLEFSSFLMKTCERLV***********************************IVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVT**********SLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTAN*****VRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
**********LFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
*****PKEAKLFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRNPSPKEAKLFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query369 2.2.26 [Sep-21-2011]
Q5U3N5297 Protein phosphatase PTC7 yes N/A 0.604 0.750 0.492 1e-63
Q6NVE9310 Protein phosphatase PTC7 yes N/A 0.598 0.712 0.492 3e-62
Q8NI37304 Protein phosphatase PTC7 yes N/A 0.598 0.726 0.492 5e-62
Q6GR25297 Protein phosphatase PTC7 N/A N/A 0.604 0.750 0.484 1e-61
B3MTI8332 Protein phosphatase PTC7 N/A N/A 0.644 0.716 0.409 7e-52
B4M5T5313 Protein phosphatase PTC7 N/A N/A 0.593 0.699 0.426 3e-50
B4JYN1307 Protein phosphatase PTC7 N/A N/A 0.598 0.719 0.417 1e-49
Q29AP0340 Protein phosphatase PTC7 no N/A 0.644 0.7 0.386 1e-47
B4NBL6315 Protein phosphatase PTC7 N/A N/A 0.639 0.749 0.395 9e-47
B3P5D3317 Protein phosphatase PTC7 N/A N/A 0.601 0.700 0.392 1e-46
>sp|Q5U3N5|PPTC7_DANRE Protein phosphatase PTC7 homolog OS=Danio rerio GN=pptc7 PE=2 SV=1 Back     alignment and function desciption
 Score =  243 bits (621), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/256 (49%), Positives = 166/256 (64%), Gaps = 33/256 (12%)

Query: 118 IVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQP 177
           ++ VADGVGGWR+YG+DP +FS  LM+TCERLV  GRF  + P  +L  SYYELL+NK P
Sbjct: 66  VLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPVGILTTSYYELLQNKVP 125

Query: 178 ILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVR 237
           +LGSST CIV+L++++  L+TA                           N+GDSGF++VR
Sbjct: 126 LLGSSTACIVVLDRQSHRLHTA---------------------------NLGDSGFLVVR 158

Query: 238 RGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVL----ESCKRRGLVVH-GDVILLATDGV 292
            G+V+HRS+EQQHYFNTPFQLS+ P      VL    ++       V  GD+IL ATDG+
Sbjct: 159 GGEVVHRSDEQQHYFNTPFQLSIAPPEAEGSVLSDSPDAADSSSFDVQLGDIILTATDGL 218

Query: 293 FDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGIST 352
           FDN+PD ++L EL + + + +    Q  A +IA  A  LA+D  YMSPFA  A  NG++ 
Sbjct: 219 FDNMPDYMILQELKKLKNT-NYESTQQTAKSIAEQAHVLAYDPNYMSPFAQFACDNGLNV 277

Query: 353 QGGKPDDITVLLAIVA 368
           +GGKPDDITVLL+IVA
Sbjct: 278 RGGKPDDITVLLSIVA 293

Danio rerio (taxid: 7955)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q6NVE9|PPTC7_MOUSE Protein phosphatase PTC7 homolog OS=Mus musculus GN=Pptc7 PE=2 SV=1 Back     alignment and function description
>sp|Q8NI37|PPTC7_HUMAN Protein phosphatase PTC7 homolog OS=Homo sapiens GN=PPTC7 PE=2 SV=1 Back     alignment and function description
>sp|Q6GR25|PPTC7_XENLA Protein phosphatase PTC7 homolog OS=Xenopus laevis GN=pptc7 PE=2 SV=1 Back     alignment and function description
>sp|B3MTI8|PTC71_DROAN Protein phosphatase PTC7 homolog fig OS=Drosophila ananassae GN=fig PE=3 SV=1 Back     alignment and function description
>sp|B4M5T5|PTC71_DROVI Protein phosphatase PTC7 homolog fig OS=Drosophila virilis GN=fig PE=3 SV=1 Back     alignment and function description
>sp|B4JYN1|PTC71_DROGR Protein phosphatase PTC7 homolog fig OS=Drosophila grimshawi GN=fig PE=3 SV=1 Back     alignment and function description
>sp|Q29AP0|PTC71_DROPS Protein phosphatase PTC7 homolog fig OS=Drosophila pseudoobscura pseudoobscura GN=fig PE=3 SV=2 Back     alignment and function description
>sp|B4NBL6|PTC71_DROWI Protein phosphatase PTC7 homolog fig OS=Drosophila willistoni GN=fig PE=3 SV=1 Back     alignment and function description
>sp|B3P5D3|PTC71_DROER Protein phosphatase PTC7 homolog fig OS=Drosophila erecta GN=fig PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
332018040311 Protein phosphatase PTC7-like protein [A 0.609 0.723 0.634 1e-87
66514502303 PREDICTED: protein phosphatase PTC7 homo 0.609 0.742 0.630 2e-87
307190204312 Protein phosphatase PTC7-like protein [C 0.609 0.721 0.626 2e-87
322803068311 hypothetical protein SINV_03687 [Solenop 0.609 0.723 0.630 8e-87
383851246303 PREDICTED: protein phosphatase PTC7 homo 0.609 0.742 0.626 2e-86
242246999304 protein phosphatase PTC7 homolog [Acyrth 0.609 0.740 0.614 1e-85
340726586233 PREDICTED: protein phosphatase PTC7 homo 0.609 0.965 0.622 2e-85
350418258303 PREDICTED: protein phosphatase PTC7 homo 0.609 0.742 0.622 2e-85
340726584303 PREDICTED: protein phosphatase PTC7 homo 0.609 0.742 0.618 3e-85
307208179311 Protein phosphatase PTC7-like protein [H 0.609 0.723 0.618 2e-84
>gi|332018040|gb|EGI58665.1| Protein phosphatase PTC7-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 163/257 (63%), Positives = 188/257 (73%), Gaps = 32/257 (12%)

Query: 118 IVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQP 177
           ++ VADGVGGWR+YGIDPGEFS+FLM+TCERLV+ GRF+ TEP  LLARSYYELLENKQP
Sbjct: 82  VIGVADGVGGWRHYGIDPGEFSNFLMRTCERLVSMGRFTPTEPAGLLARSYYELLENKQP 141

Query: 178 ILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVR 237
           ILGSST C++ILNKETS++Y A                           NIGDSGFV+VR
Sbjct: 142 ILGSSTACVIILNKETSSIYAA---------------------------NIGDSGFVVVR 174

Query: 238 RGKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVL----ESCKRRGLVVH-GDVILLATDGV 292
           RG+V+HRS EQQHYFNTPFQLSLPP  H+  VL    ES       V  GDVILLATDGV
Sbjct: 175 RGEVVHRSSEQQHYFNTPFQLSLPPPGHSDLVLRDSPESADTSSFGVEDGDVILLATDGV 234

Query: 293 FDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGIST 352
           FDNVPD LL+ E+ + +G +DP ++Q VANTIA MAR LAFD+ +MSPFA  AR NGI  
Sbjct: 235 FDNVPDQLLVTEMRKIEGERDPTKIQCVANTIAWMARRLAFDDAFMSPFAQNARENGIDA 294

Query: 353 QGGKPDDITVLLAIVAL 369
            GGKPDDITVLLA VA+
Sbjct: 295 IGGKPDDITVLLATVAI 311

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|66514502|ref|XP_624085.1| PREDICTED: protein phosphatase PTC7 homolog [Apis mellifera] gi|380020391|ref|XP_003694070.1| PREDICTED: protein phosphatase PTC7 homolog [Apis florea] Back     alignment and taxonomy information
>gi|307190204|gb|EFN74319.1| Protein phosphatase PTC7-like protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322803068|gb|EFZ23156.1| hypothetical protein SINV_03687 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|383851246|ref|XP_003701145.1| PREDICTED: protein phosphatase PTC7 homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|242246999|ref|NP_001156048.1| protein phosphatase PTC7 homolog [Acyrthosiphon pisum] gi|239789000|dbj|BAH71150.1| ACYPI000335 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|340726586|ref|XP_003401637.1| PREDICTED: protein phosphatase PTC7 homolog isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350418258|ref|XP_003491801.1| PREDICTED: protein phosphatase PTC7 homolog [Bombus impatiens] Back     alignment and taxonomy information
>gi|340726584|ref|XP_003401636.1| PREDICTED: protein phosphatase PTC7 homolog isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|307208179|gb|EFN85653.1| Protein phosphatase PTC7-like protein [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
FB|FBgn0035228321 CG12091 [Drosophila melanogast 0.447 0.514 0.617 3.3e-57
UNIPROTKB|E1BQP0297 PPTC7 "Uncharacterized protein 0.441 0.548 0.532 4.2e-47
ZFIN|ZDB-GENE-041114-74297 pptc7a "PTC7 protein phosphata 0.441 0.548 0.520 2.9e-46
MGI|MGI:2444593310 Pptc7 "PTC7 protein phosphatas 0.441 0.525 0.526 4.7e-46
RGD|1310383307 Pptc7 "PTC7 protein phosphatas 0.441 0.530 0.526 4.7e-46
FB|FBgn0029949374 CG15035 [Drosophila melanogast 0.441 0.435 0.541 6e-46
UNIPROTKB|E1BEW5307 PPTC7 "Uncharacterized protein 0.441 0.530 0.526 6e-46
UNIPROTKB|J9P873304 PPTC7 "Uncharacterized protein 0.441 0.536 0.526 6e-46
UNIPROTKB|Q8NI37304 PPTC7 "Protein phosphatase PTC 0.441 0.536 0.526 6e-46
ZFIN|ZDB-GENE-081105-111297 pptc7b "PTC7 protein phosphata 0.441 0.548 0.514 6e-46
FB|FBgn0035228 CG12091 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 538 (194.4 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
 Identities = 105/170 (61%), Positives = 133/170 (78%)

Query:   205 IVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSLPPLS 264
             I+ SSTAC++ILN+ETST++TANIGDSGFV+VR G+V+H+SEEQQHYFNTPFQLSLPP  
Sbjct:   152 ILGSSTACVLILNRETSTVHTANIGDSGFVVVREGQVVHKSEEQQHYFNTPFQLSLPPPG 211

Query:   265 HTTQVL----ESCKRRGLVVH-GDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQL 319
             H   VL    ES       V  GDVIL+ATDGVFDNVP+ L+L  L   +G +DP++LQ+
Sbjct:   212 HGPNVLSDSPESADTMSFPVRDGDVILIATDGVFDNVPEDLMLQVLSEVEGERDPVKLQM 271

Query:   320 VANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVAL 369
              AN++ALMARTL+ +  ++SPFA+ AR N I  +GGKPDDITV+LA VA+
Sbjct:   272 TANSLALMARTLSLNSEFLSPFALSARRNNIQARGGKPDDITVVLATVAM 321
GO:0003824 "catalytic activity" evidence=IEA
UNIPROTKB|E1BQP0 PPTC7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-74 pptc7a "PTC7 protein phosphatase homolog a (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2444593 Pptc7 "PTC7 protein phosphatase homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310383 Pptc7 "PTC7 protein phosphatase homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0029949 CG15035 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1BEW5 PPTC7 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9P873 PPTC7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NI37 PPTC7 "Protein phosphatase PTC7 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081105-111 pptc7b "PTC7 protein phosphatase homolog b (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5U3N5PPTC7_DANRE3, ., 1, ., 3, ., 1, 60.49210.60430.7508yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-11
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-10
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-08
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 5e-06
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 60/183 (32%)

Query: 209 STACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQ-------------------Q 249
           STA + +++     LY AN+GDS  V+ R GK +  +E+                     
Sbjct: 102 STAVVALISGNK--LYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 159

Query: 250 HYFNTPFQLS--------LPPLSHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSLL 301
              N    LS         P +S    V        L    D ++LA+DG++D + +  +
Sbjct: 160 GRVNGVLALSRAIGDFFLKPYVSAEPDV----TVVELTEKDDFLILASDGLWDVLSNQEV 215

Query: 302 LAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDIT 361
           + ++VR   SKDP +           A     D                    G  D+IT
Sbjct: 216 V-DIVRKHLSKDPKE-----------AAKRLIDLAL---------------ARGSKDNIT 248

Query: 362 VLL 364
           V++
Sbjct: 249 VVV 251

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
KOG1379|consensus330 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.96
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
KOG0698|consensus330 99.95
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.94
KOG0697|consensus379 99.94
KOG1323|consensus493 99.8
KOG0699|consensus542 99.8
KOG0700|consensus390 99.8
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.79
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.74
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.74
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.74
KOG1379|consensus330 99.42
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.92
KOG0618|consensus 1081 98.61
PRK10693303 response regulator of RpoS; Provisional 89.95
>KOG1379|consensus Back     alignment and domain information 
Probab=100.00  E-value=3e-64  Score=474.33  Aligned_cols=259  Identities=49%  Similarity=0.817  Sum_probs=231.6

Q ss_pred             EEEeeeCCCCCCCCccccccCCCCCceeeeeccCCCCHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHhccCcc
Q psy4509          11 LFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQP   90 (369)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~geda~f~~~~~~~~~~~~s~~L~~~~~~~~~~~~~~~~~p~~lL~~~~~~~~~~~~~   90 (369)
                      +|+..|+++|+....+..|.++|||||||||++...                                            
T Consensus        68 ~vt~~~~~~~~~~~~~~~~~~~~GEDa~Fvss~~~~--------------------------------------------  103 (330)
T KOG1379|consen   68 LVTSLCGFSKDFIRPHPSKVGKGGEDAWFVSSNPHA--------------------------------------------  103 (330)
T ss_pred             hhhhhccccccccCCccccCCCCCCcceeeccCccc--------------------------------------------
Confidence            666666666665444444999999999999998543                                            


Q ss_pred             ccccceeeeeeccCCceEEEeccCCCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q psy4509          91 ILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYE  170 (369)
Q Consensus        91 ~~G~st~~~~r~~neD~~~~~~~~g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~  170 (369)
                                                .+++||||||||+..|+||+.|+++||.+|+++.++..+.+.+|..+|.+||.+
T Consensus       104 --------------------------~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~  157 (330)
T KOG1379|consen  104 --------------------------IVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAE  157 (330)
T ss_pred             --------------------------ceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHH
Confidence                                      256799999999999999999999999999999998888889999999999999


Q ss_pred             HHHccCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEEEeCccccc
Q psy4509         171 LLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQH  250 (369)
Q Consensus       171 ~~~~~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h  250 (369)
                      +.+.+.+..|+||||                           ++.+++++++||+||+|||++.++|+|++++.|.+|+|
T Consensus       158 l~~~~~~~vGSSTAc---------------------------I~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H  210 (330)
T KOG1379|consen  158 LKSQKVPIVGSSTAC---------------------------ILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH  210 (330)
T ss_pred             HhhcCCCCCCcceee---------------------------eeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee
Confidence            998888888999999                           67788779999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCC---Cccccceeeee-ecCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHH
Q psy4509         251 YFNTPFQLSLPPLSHTT---QVLESCKRRGL-VVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIAL  326 (369)
Q Consensus       251 ~~~~p~ql~~~~~~~~~---~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~  326 (369)
                      +||+|||+...|++...   +.++.++..++ +++||+||||||||||||++++|+.++...... ...++|..|++|++
T Consensus       211 ~FN~PyQLs~~p~~~~~~~~d~p~~ad~~~~~v~~GDvIilATDGlfDNl~e~~Il~il~~~~~~-~~~~lq~~A~~ia~  289 (330)
T KOG1379|consen  211 YFNTPYQLSSPPEGYSSYISDVPDSADVTSFDVQKGDVIILATDGLFDNLPEKEILSILKGLDAR-GNLDLQVTAQKIAE  289 (330)
T ss_pred             ccCCceeeccCCccccccccCCccccceEEEeccCCCEEEEecccccccccHHHHHHHHHHhhcc-ccccHHHHHHHHHH
Confidence            99999999998875532   23366788899 999999999999999999999999999987532 46789999999999


Q ss_pred             HHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509         327 MARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIV  367 (369)
Q Consensus       327 ~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v  367 (369)
                      .|+++|+|+++.||||.+||++|.++.|||+|||||||+.|
T Consensus       290 ~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v  330 (330)
T KOG1379|consen  290 KARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV  330 (330)
T ss_pred             HHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence            99999999999999999999999999999999999999875

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0698|consensus Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697|consensus Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>KOG0700|consensus Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 6e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
3rnr_A211 Stage II sporulation E family protein; structural 2e-04
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-04
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-04
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 5e-04
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 6e-04
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 7e-04
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-04
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Length = 242 Back     alignment and structure
 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 48/179 (26%)

Query: 194 STLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFN 253
             LY    G     S+   I+ ++  + ++      +   ++ R G+    SE       
Sbjct: 84  DFLYAMRDGK---VSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESG----- 135

Query: 254 TPFQLSLPPL--SHTTQVLESCKRRGLVVHGDVILLATDGVFDNVPDSL----LLAELVR 307
                    +     T+             G  ++L +DG+             LA   R
Sbjct: 136 -------GRIGIYRHTRPRVLEFP---AEPGLTVILVSDGIIGAGGRRGQPLEFLATGGR 185

Query: 308 AQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKP-DDITVLLA 365
             G + P Q  +      L+   L  D                    G+  DD+TV++ 
Sbjct: 186 VAGPETPAQ-AIAD---ELLEAALVAD-------------------DGRAGDDMTVVVL 221
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Length = 242 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.98
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.98
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.97
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.97
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 99.97
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 99.97
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.97
3rnr_A211 Stage II sporulation E family protein; structural 99.96
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.96
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.9
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.87
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.8
3f79_A255 Probable two-component response regulator; adaptor 99.8
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.5
3eq2_A394 Probable two-component response regulator; adaptor 99.13
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
Probab=100.00  E-value=1.4e-35  Score=287.25  Aligned_cols=221  Identities=19%  Similarity=0.242  Sum_probs=154.0

Q ss_pred             CccccccceeeeeeccCCceEEEeccC-----------------CCcEEEEEcCCcccccCCCChhHHHHHHH-HHHHHH
Q psy4509          88 KQPILGSSTACIVILNKETSTLCTANI-----------------GNSIVRVADGVGGWRNYGIDPGEFSSFLM-KTCERL  149 (369)
Q Consensus        88 ~~~~~G~st~~~~r~~neD~~~~~~~~-----------------g~~~faVaDGvGG~~~~g~~a~~~a~~l~-~~~~~~  149 (369)
                      ..+.+|.++..+.|.+|||++.+..++                 ...+|+||||||||.     ++++++.++ ..+.+.
T Consensus         7 ~~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~-----~~~~as~~~~~~l~~~   81 (316)
T 3kdj_B            7 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQ-----VANYCRERMHLALAEE   81 (316)
T ss_dssp             ---CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSH-----HHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHH
Confidence            445679999999999999999986553                 235999999999976     466665554 333333


Q ss_pred             HhcCC--CC-----CCCHHHHHHHHHHHHHHc---cCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecC
Q psy4509         150 VTSGR--FS-----CTEPTSLLARSYYELLEN---KQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKE  219 (369)
Q Consensus       150 ~~~~~--~~-----~~~~~~~L~~a~~~~~~~---~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~  219 (369)
                      +....  ..     ...+.++|.++|..+.+.   .....+|||++                           ++++.  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~---------------------------~~~i~--  132 (316)
T 3kdj_B           82 IAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSV---------------------------VAVVF--  132 (316)
T ss_dssp             HHHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEE---------------------------EEEEC--
T ss_pred             HHhhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEE---------------------------EEEEE--
Confidence            32111  00     123567888888877543   12234567766                           44554  


Q ss_pred             CCceEEEEecCCceEEEECCeEEEeCcccccccCCccc-------------------ccCCCCCC-------CCCccccc
Q psy4509         220 TSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQ-------------------LSLPPLSH-------TTQVLESC  273 (369)
Q Consensus       220 ~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h~~~~p~q-------------------l~~~~~~~-------~~~vl~~~  273 (369)
                      ++++|++||||||+|++|+|+++++|+||+..  .+.+                   .+.+....       ...+..+|
T Consensus       133 ~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~--~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~p  210 (316)
T 3kdj_B          133 PSHIFVANCGDSRAVLCRGKTALPLSVDHKPD--REDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDP  210 (316)
T ss_dssp             SSEEEEEEESSCEEEEEETTEEEESCCCCCTT--SHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCC
T ss_pred             CCEEEEEEccCCEEEEEECCEecccCCCCCCC--CHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCCcCCCC
Confidence            68999999999999999999999999996532  1111                   11110000       01233678


Q ss_pred             eeeee--ecCCCEEEEeccCCCCCCChHHHHHHHHhhh---------------------CCCCCchHHHHHHHHHHHHHH
Q psy4509         274 KRRGL--VVHGDVILLATDGVFDNVPDSLLLAELVRAQ---------------------GSKDPMQLQLVANTIALMART  330 (369)
Q Consensus       274 d~~~~--l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~---------------------~~~~~~~~~~~A~~Lv~~A~~  330 (369)
                      ++..+  +++||+||||||||||+|+++||+++++...                     +.....+++.+|+.|++.|++
T Consensus       211 dv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~  290 (316)
T 3kdj_B          211 EVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQ  290 (316)
T ss_dssp             EEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHH
Confidence            88776  7899999999999999999999999997610                     001134689999999999997


Q ss_pred             hccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509         331 LAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIV  367 (369)
Q Consensus       331 ~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v  367 (369)
                      +                       |+.|||||||+.+
T Consensus       291 ~-----------------------g~~DNiTvivv~l  304 (316)
T 3kdj_B          291 R-----------------------GSKDNISVVVVDL  304 (316)
T ss_dssp             T-----------------------TCCSCEEEEEEEC
T ss_pred             c-----------------------CCCCCeEEEEEEc
Confidence            4                       7889999999986
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 369
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 8e-07
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-06
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.2 bits (111), Expect = 8e-07
 Identities = 42/265 (15%), Positives = 85/265 (32%), Gaps = 70/265 (26%)

Query: 114 IGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLE 173
            G  ++ +ADG+GG        GE +S                       L  +    L+
Sbjct: 24  AGARLLALADGMGGHAA-----GEVASQ----------------------LVIAALAHLD 56

Query: 174 NKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGF 233
           + +P           +    S +      +  +      +  +    + L   +IGDS  
Sbjct: 57  DDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRG 116

Query: 234 VIVRRGKVIHRSEEQQHYFNTPFQLSL--------PPLSHTTQVLESCKRRGLVVH---- 281
            ++R G++   +++         +  +        P  S   + L   +    +      
Sbjct: 117 YLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLIMRALTGHEVEPTLTMREAR 176

Query: 282 -GDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSP 340
            GD  LL +DG+ D V D      ++ A    +  +    A+ +  +A            
Sbjct: 177 AGDRYLLCSDGLSDPVSDE----TILEALQIPEVAE---SAHRLIELAL----------- 218

Query: 341 FAIQARANGISTQGGKPDDITVLLA 365
                       +GG PD++TV++A
Sbjct: 219 ------------RGGGPDNVTVVVA 231
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query369
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-34  Score=264.65  Aligned_cols=206  Identities=23%  Similarity=0.261  Sum_probs=143.6

Q ss_pred             ccceeee-eeccCCceEEEeccCCCcEEEEEcCCcccccCCCChhHHHHHHHHH-HHHHHhcCCCCCCCHHHHHHHHHHH
Q psy4509          93 GSSTACI-VILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKT-CERLVTSGRFSCTEPTSLLARSYYE  170 (369)
Q Consensus        93 G~st~~~-~r~~neD~~~~~~~~g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~-~~~~~~~~~~~~~~~~~~L~~a~~~  170 (369)
                      ++.|..+ +|..|||++++    +..+|+|||||||+.     .+++++.++.. +.++..+  ....++.+.|++++.+
T Consensus         6 ~~~s~~G~~R~~nEDa~~~----~~~l~~V~DG~GG~~-----~g~~as~~~~~~l~~~~~~--~~~~~~~~~l~~~~~~   74 (235)
T d1txoa_           6 AARSDRGLVRANNEDSVYA----GARLLALADGMGGHA-----AGEVASQLVIAALAHLDDD--EPGGDLLAKLDAAVRA   74 (235)
T ss_dssp             EEEEECCSSCSSCCEEEEE----CSSEEEEEEEECTTT-----HHHHHHHHHHHHHGGGGSS--CCCSCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCcccc----CCCEEEEEeCCCCcH-----HHHHHHHHHHHHHHHHhhc--cCcccHHHHHHHHHHH
Confidence            4445555 69999999986    446999999999964     56777766533 2222222  2345666666666665


Q ss_pred             HHH----c---cCCCCC-CcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEE
Q psy4509         171 LLE----N---KQPILG-SSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVI  242 (369)
Q Consensus       171 ~~~----~---~~~~~g-~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~  242 (369)
                      +.+    .   .....+ |||++                           ++++.  ++++|++|+||||+|++|+|++.
T Consensus        75 ~~~~l~~~~~~~~~~~~~gtt~~---------------------------~~~~~--~~~l~~anvGDSr~~l~r~g~~~  125 (235)
T d1txoa_          75 GNSAIAAQVEMEPDLEGMGTTLT---------------------------AILFA--GNRLGLVHIGDSRGYLLRDGELT  125 (235)
T ss_dssp             HHHHHHHHHHHCGGGTTCEECEE---------------------------EEEEE--TTEEEEEEESSCEEEEEETTEEE
T ss_pred             HHHHHHHHhhcccccccceeeee---------------------------eeeec--cceeEEEecCCccEEEecCCEEE
Confidence            432    1   112223 33333                           44554  78999999999999999999999


Q ss_pred             EeCccccccc-------CCcccccCCCCCC-----CCCccccceeeee-ecCCCEEEEeccCCCCCCChHHHHHHHHhhh
Q psy4509         243 HRSEEQQHYF-------NTPFQLSLPPLSH-----TTQVLESCKRRGL-VVHGDVILLATDGVFDNVPDSLLLAELVRAQ  309 (369)
Q Consensus       243 ~lT~dq~h~~-------~~p~ql~~~~~~~-----~~~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~  309 (369)
                      ++|+||....       ..+......|...     .+.....|++..+ +++||+||||||||||+|+++||.++++.. 
T Consensus       126 ~lt~dH~~~~~~~~~g~~~~~~~~~~~~~~~lt~~~g~~~~~pdi~~~~l~~~D~llL~SDGl~d~l~~~ei~~i~~~~-  204 (235)
T d1txoa_         126 QITKDDTFVQTLVDEGRITPEEAHSHPQRSLIMRALTGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQIP-  204 (235)
T ss_dssp             ECSCCCBHHHHHHHTTSSCTTGGGGCTTTTCBCCCBSSSCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTSS-
T ss_pred             EecCCCcHHHHhhhhcccchhhhhhccccchhhcccccccccceEEEEecCCCCEEEEcCcchhcCCCHHHHHHHHhCC-
Confidence            9999975321       1111111111110     0111146889888 999999999999999999999999998643 


Q ss_pred             CCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q psy4509         310 GSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVA  368 (369)
Q Consensus       310 ~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v~  368 (369)
                            +++++|+.|+++|+++                       |+.|||||||+.|.
T Consensus       205 ------~~~~~a~~Lv~~A~~~-----------------------gs~DNiTvivv~l~  234 (235)
T d1txoa_         205 ------EVAESAHRLIELALRG-----------------------GGPDNVTVVVADLE  234 (235)
T ss_dssp             ------SHHHHHHHHHHHHHHT-----------------------TCCSCEEEEEEEEE
T ss_pred             ------CHHHHHHHHHHHHHhc-----------------------CCCCCEEEEEEEEe
Confidence                  7999999999999974                       77899999999873
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure