Psyllid ID: psy45

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Secondary Structure (PSIPRED)
cHHHHccccccEEcccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHccccccHHHccccccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAEEQLKVDnirraaapndhplFIDALVDIVSSHlrsktkinpkflnrcphcvnpkcsqaKQWFSQLCA
Flexible Loop (DISEMBL)
maeeqlkvDNIRraaapndhplfIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Low Complexity Region (SEG)
MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Disordered region (IsUnstruct)
******************DHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS****
Disordered Region (DISOPRED)
************RAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Disordered Region (DISEMBL)
MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Disordered Region (DISPRO)
MAE*QLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	69	2.2.26 [Sep-21-2011]
Q9V9S8	384	Ferrochelatase, mitochond	yes	N/A	0.956	0.171	0.590	2e-20
P22600	416	Ferrochelatase, mitochond	yes	N/A	0.840	0.139	0.465	1e-09
O57478	411	Ferrochelatase, mitochond	N/A	N/A	0.855	0.143	0.457	2e-09
Q3YA36	423	Ferrochelatase, mitochond	yes	N/A	0.840	0.137	0.448	2e-08
P22830	423	Ferrochelatase, mitochond	yes	N/A	0.840	0.137	0.448	3e-08
O42479	402	Ferrochelatase, mitochond	yes	N/A	0.840	0.144	0.448	1e-07
P22315	420	Ferrochelatase, mitochond	yes	N/A	0.898	0.147	0.403	1e-07

>sp|Q9V9S8|HEMH_DROME Ferrochelatase, mitochondrial OS=Drosophila melanogaster GN=Fech PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           +++ V+ IRRAA PNDHPLFIDAL ++V+ HL+S+  +NPKFL RCP C NPKC ++K W
Sbjct: 318 KEVGVEEIRRAATPNDHPLFIDALTNVVADHLKSQQAVNPKFLMRCPMCSNPKCRESKSW 377

Query: 64  FSQLCA 69
           + QLC+
Sbjct: 378 YRQLCS 383

Catalyzes the ferrous insertion into protoporphyrin IX.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: .EC: 1

>sp|P22600|HEMH_BOVIN Ferrochelatase, mitochondrial OS=Bos taurus GN=FECH PE=1 SV=3

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           ++NIRRA + N +PLF  AL D+V SHL+SK + + +    CP CVNP C + K +F+
Sbjct: 355 LENIRRAESLNGNPLFSKALADLVHSHLQSKERCSTQLTLSCPLCVNPTCRETKSFFT 412

Catalyzes the ferrous insertion into protoporphyrin IX.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

>sp|O57478|HEMH_XENLA Ferrochelatase, mitochondrial OS=Xenopus laevis GN=fech PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 40/59 (67%)

Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQ 66
           V+NIRR+ + N +PLF  AL D+V SH++S    + +   RCP CVNP C +AK +F++
Sbjct: 349 VENIRRSESLNGNPLFSKALADLVLSHMKSSEICSKQLSLRCPMCVNPVCGEAKSFFTK 407

Catalyzes the ferrous insertion into protoporphyrin IX.

Xenopus laevis (taxid: 8355)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

>sp|Q3YA36|HEMH_PANTR Ferrochelatase, mitochondrial OS=Pan troglodytes GN=FECH PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 362 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 419

Catalyzes the ferrous insertion into protoporphyrin IX.

Pan troglodytes (taxid: 9598)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

>sp|P22830|HEMH_HUMAN Ferrochelatase, mitochondrial OS=Homo sapiens GN=FECH PE=1 SV=2

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 362 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 419

Catalyzes the ferrous insertion into protoporphyrin IX.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

>sp|O42479|HEMH_CHICK Ferrochelatase, mitochondrial OS=Gallus gallus GN=FECH PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 341 VENIRRAESLNGNPLFSKALADLVCSHIQSNEICSKQLTLCCPLCVNPVCRETKAFFT 398

Catalyzes the ferrous insertion into protoporphyrin IX.

Gallus gallus (taxid: 9031)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

>sp|P22315|HEMH_MOUSE Ferrochelatase, mitochondrial OS=Mus musculus GN=Fech PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           ++   +NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +
Sbjct: 355 QKCGAENIRRAESLNGNPLFSKALADLVHSHIQSNKLCSTQLSLNCPLCVNPVCRKTKSF 414

Query: 64  FS 65
           F+
Sbjct: 415 FT 416

Catalyzes the ferrous insertion into protoporphyrin IX.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
242021611	393	gerrochelatase, putative [Pediculus huma	0.971	0.170	0.686	6e-23
156555534	398	PREDICTED: ferrochelatase, mitochondrial	0.942	0.163	0.661	1e-20
14132776	393	ferrochelatase precursor [Chironomus sp.	0.956	0.167	0.681	2e-20
307181895	395	Ferrochelatase, mitochondrial [Camponotu	0.927	0.162	0.656	4e-20
332028985	481	Ferrochelatase, mitochondrial [Acromyrme	0.942	0.135	0.646	5e-20
322799046	388	hypothetical protein SINV_03770 [Solenop	0.942	0.167	0.646	6e-20
194740826	384	GF17503 [Drosophila ananassae] gi|190625	0.956	0.171	0.621	1e-19
350534844	384	uncharacterized protein LOC100169012 [Ac	0.942	0.169	0.630	2e-19
307202303	481	Ferrochelatase, mitochondrial [Harpegnat	0.956	0.137	0.621	3e-19
195505566	384	GE23292 [Drosophila yakuba] gi|194185661	0.956	0.171	0.606	3e-19

>gi|242021611|ref|XP_002431238.1| gerrochelatase, putative [Pediculus humanus corporis] gi|212516487|gb|EEB18500.1| gerrochelatase, putative [Pediculus humanus corporis]

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 3   EEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQ 62
           +E++ V+ IRR +APNDHPLFI+ALVDIVS+HL+S  KI+PKFL  CPHCVNPKC+ +KQ
Sbjct: 327 KEEVGVETIRRVSAPNDHPLFINALVDIVSNHLKSNQKISPKFLTTCPHCVNPKCTSSKQ 386

Query: 63  WFSQLCA 69
           W++QLCA
Sbjct: 387 WYAQLCA 393

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555534|ref|XP_001603205.1| PREDICTED: ferrochelatase, mitochondrial-like isoform 1 [Nasonia vitripennis] gi|345496097|ref|XP_003427650.1| PREDICTED: ferrochelatase, mitochondrial-like isoform 2 [Nasonia vitripennis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 54/65 (83%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           ++LK+D IRRA APNDHPLFI+AL DIVS+HL+S   + PKFLNRCPHCVN  C+ +K W
Sbjct: 332 QELKIDTIRRAKAPNDHPLFIEALADIVSTHLKSDKLVTPKFLNRCPHCVNQNCADSKNW 391

Query: 64  FSQLC 68
           FS++C
Sbjct: 392 FSKIC 396

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|14132776|gb|AAK52337.1| ferrochelatase precursor [Chironomus sp. YKL-2001]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 56/66 (84%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           +++KV+ I RAAAPNDHPLFIDA+ DIVS HL+S  KINPKFL RCPHCV+ +C Q+KQ+
Sbjct: 328 KEVKVEKILRAAAPNDHPLFIDAMTDIVSKHLKSDQKINPKFLTRCPHCVSDRCHQSKQF 387

Query: 64  FSQLCA 69
           F +LCA
Sbjct: 388 FKELCA 393

Source: Chironomus sp. YKL-2001

Species: Chironomus sp. YKL-2001

Genus: Chironomus

Family: Chironomidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181895|gb|EFN69335.1| Ferrochelatase, mitochondrial [Camponotus floridanus]

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 5   QLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWF 64
           +L ++ IRRAAAPNDHP+FIDAL DIV+SHLRS+  INPKFL RCPHCVN  C  +K W+
Sbjct: 330 ELGIERIRRAAAPNDHPIFIDALADIVASHLRSQQPINPKFLTRCPHCVNLNCEASKSWY 389

Query: 65  SQLC 68
           +++C
Sbjct: 390 AKIC 393

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028985|gb|EGI68999.1| Ferrochelatase, mitochondrial [Acromyrmex echinatior]

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 53/65 (81%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           E+L ++ IRRAAAPNDHP+FIDAL DIV S LRSK  +NPKFL RCPHCVN  C  +K+W
Sbjct: 415 EELGIETIRRAAAPNDHPIFIDALTDIVVSRLRSKHSVNPKFLTRCPHCVNLNCDASKKW 474

Query: 64  FSQLC 68
           ++++C
Sbjct: 475 YAEIC 479

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799046|gb|EFZ20501.1| hypothetical protein SINV_03770 [Solenopsis invicta]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 53/65 (81%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           E+L ++ IRRAA PNDHP+FIDAL DIV SHLRSK  +NPKFL RCPHCVN  C  +K+W
Sbjct: 322 EELGIEKIRRAATPNDHPVFIDALTDIVVSHLRSKQSVNPKFLIRCPHCVNLSCDASKKW 381

Query: 64  FSQLC 68
           ++++C
Sbjct: 382 YAKIC 386

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194740826|ref|XP_001952891.1| GF17503 [Drosophila ananassae] gi|190625950|gb|EDV41474.1| GF17503 [Drosophila ananassae]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 55/66 (83%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           +++ V+ IRRAAAPNDHPLFI+AL DIV+ HL+S+  +NPKFL RCP C NPKC ++K+W
Sbjct: 318 KEVGVEEIRRAAAPNDHPLFINALSDIVADHLKSQQSVNPKFLMRCPMCTNPKCRESKKW 377

Query: 64  FSQLCA 69
           + QLC+
Sbjct: 378 YQQLCS 383

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350534844|ref|NP_001232972.1| uncharacterized protein LOC100169012 [Acyrthosiphon pisum] gi|239791055|dbj|BAH72043.1| ACYPI004979 [Acyrthosiphon pisum]

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 51/65 (78%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           E+L V NIRRAAAPNDHPLFID + DIVS HLR    ++PKFL RC HC++ +C ++KQW
Sbjct: 317 EELGVKNIRRAAAPNDHPLFIDGIADIVSQHLRENKPVSPKFLLRCAHCISSRCYESKQW 376

Query: 64  FSQLC 68
           FS +C
Sbjct: 377 FSSVC 381

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202303|gb|EFN81767.1| Ferrochelatase, mitochondrial [Harpegnathos saltator]

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 53/66 (80%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           ++L ++ IRRAAAPN HPLFIDAL DIV+SHL+SK  I+PKFL RCPHCVN  C  +K W
Sbjct: 413 KELGIERIRRAAAPNVHPLFIDALADIVASHLKSKQTISPKFLTRCPHCVNTSCDASKSW 472

Query: 64  FSQLCA 69
           ++++C 
Sbjct: 473 YAKICG 478

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195505566|ref|XP_002099560.1| GE23292 [Drosophila yakuba] gi|194185661|gb|EDW99272.1| GE23292 [Drosophila yakuba]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 54/66 (81%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           +++ V+ IRRAAAPNDHPLFIDAL ++V+ HL+S+  +NPKFL RCP C NPKC ++K W
Sbjct: 318 KEVGVEEIRRAAAPNDHPLFIDALTNVVADHLKSQQSVNPKFLMRCPMCSNPKCRESKSW 377

Query: 64  FSQLCA 69
           + QLC+
Sbjct: 378 YRQLCS 383

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
FB|FBgn0024891	384	ferrochelatase "ferrochelatase	0.956	0.171	0.590	6.3e-20
ZFIN|ZDB-GENE-000928-1	409	fech "ferrochelatase" [Danio r	0.898	0.151	0.5	2.8e-11
UNIPROTKB|P22600	416	FECH "Ferrochelatase, mitochon	0.840	0.139	0.465	1.6e-09
UNIPROTKB|F1S1X4	366	FECH "Ferrochelatase" [Sus scr	0.826	0.155	0.438	1.2e-08
UNIPROTKB|P22830	423	FECH "Ferrochelatase, mitochon	0.840	0.137	0.448	1.6e-08
UNIPROTKB|F1P9A3	423	FECH "Ferrochelatase" [Canis l	0.840	0.137	0.448	2e-08
UNIPROTKB|F1NBT4	402	FECH "Ferrochelatase, mitochon	0.840	0.144	0.448	3.9e-08
UNIPROTKB|O42479	402	FECH "Ferrochelatase, mitochon	0.840	0.144	0.448	3.9e-08
UNIPROTKB|E1C7D2	413	FECH "Ferrochelatase, mitochon	0.840	0.140	0.448	4.1e-08
MGI|MGI:95513	420	Fech "ferrochelatase" [Mus mus	0.826	0.135	0.438	5.5e-08

FB|FBgn0024891 ferrochelatase "ferrochelatase" [Drosophila melanogaster (taxid:7227)]

 Score = 239 (89.2 bits), Expect = 6.3e-20, P = 6.3e-20
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query:     4 EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
             +++ V+ IRRAA PNDHPLFIDAL ++V+ HL+S+  +NPKFL RCP C NPKC ++K W
Sbjct:   318 KEVGVEEIRRAATPNDHPLFIDALTNVVADHLKSQQAVNPKFLMRCPMCSNPKCRESKSW 377

Query:    64 FSQLCA 69
             + QLC+
Sbjct:   378 YRQLCS 383

GO:0004325 "ferrochelatase activity" evidence=ISS;NAS;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISS;NAS

GO:0006782 "protoporphyrinogen IX biosynthetic process" evidence=ISS;NAS

GO:0005875 "microtubule associated complex" evidence=IDA

ZFIN|ZDB-GENE-000928-1 fech "ferrochelatase" [Danio rerio (taxid:7955)]

 Score = 162 (62.1 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 31/62 (50%), Positives = 42/62 (67%)

Query:     4 EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
             E++ V+NIRRA + N +PLF  AL D+V SHL+S    + +   RCP CVNP C+Q K +
Sbjct:   344 EEVGVENIRRAESLNGNPLFFRALADLVQSHLQSNESCSRQLTLRCPLCVNPTCAQTKAF 403

Query:    64 FS 65
             FS
Sbjct:   404 FS 405

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=IEA;IMP

GO:0043249 "erythrocyte maturation" evidence=IMP

GO:0016829 "lyase activity" evidence=IEA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

UNIPROTKB|P22600 FECH "Ferrochelatase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             ++NIRRA + N +PLF  AL D+V SHL+SK + + +    CP CVNP C + K +F+
Sbjct:   355 LENIRRAESLNGNPLFSKALADLVHSHLQSKERCSTQLTLSCPLCVNPTCRETKSFFT 412

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=IEA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IEA

GO:0030350 "iron-responsive element binding" evidence=IEA

GO:0030218 "erythrocyte differentiation" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IEA

GO:0009589 "detection of UV" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

UNIPROTKB|F1S1X4 FECH "Ferrochelatase" [Sus scrofa (taxid:9823)]

 Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query:     9 DNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             +NIRRA + N +PLF  AL D+V SH++S  + + +    CP CVNP C + K +F+
Sbjct:   306 ENIRRAESLNGNPLFSKALADLVHSHIQSNERCSTQLTLSCPLCVNPVCRETKSFFT 362

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=IEA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IEA

GO:0030350 "iron-responsive element binding" evidence=IEA

GO:0030218 "erythrocyte differentiation" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IEA

GO:0009589 "detection of UV" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

UNIPROTKB|P22830 FECH "Ferrochelatase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   362 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 419

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0009589 "detection of UV" evidence=IEA

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0030218 "erythrocyte differentiation" evidence=IEA

GO:0030350 "iron-responsive element binding" evidence=IEA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IEA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0008198 "ferrous iron binding" evidence=TAS

GO:0009416 "response to light stimulus" evidence=TAS

GO:0006091 "generation of precursor metabolites and energy" evidence=TAS

GO:0004325 "ferrochelatase activity" evidence=IDA;TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006778 "porphyrin-containing compound metabolic process" evidence=TAS

GO:0006783 "heme biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=IDA

UNIPROTKB|F1P9A3 FECH "Ferrochelatase" [Canis lupus familiaris (taxid:9615)]

 Score = 136 (52.9 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   362 VENIRRAESLNGNPLFSKALADLVLSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 419

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=IEA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IEA

GO:0030350 "iron-responsive element binding" evidence=IEA

GO:0030218 "erythrocyte differentiation" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IEA

GO:0009589 "detection of UV" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

UNIPROTKB|F1NBT4 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   341 VENIRRAESLNGNPLFSKALADLVCSHIQSNEICSKQLTLCCPLCVNPVCRETKAFFT 398

GO:0004325 "ferrochelatase activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

UNIPROTKB|O42479 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   341 VENIRRAESLNGNPLFSKALADLVCSHIQSNEICSKQLTLCCPLCVNPVCRETKAFFT 398

GO:0046872 "metal ion binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006783 "heme biosynthetic process" evidence=TAS

GO:0042168 "heme metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E1C7D2 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query:     8 VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   352 VENIRRAESLNGNPLFSKALADLVCSHIQSNEICSKQLTLCCPLCVNPVCRETKAFFT 409

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0004325 "ferrochelatase activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0009589 "detection of UV" evidence=IEA

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0030218 "erythrocyte differentiation" evidence=IEA

GO:0030350 "iron-responsive element binding" evidence=IEA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IEA

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=IEA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0055072 "iron ion homeostasis" evidence=IEA

MGI|MGI:95513 Fech "ferrochelatase" [Mus musculus (taxid:10090)]

 Score = 132 (51.5 bits), Expect = 5.5e-08, P = 5.5e-08
 Identities = 25/57 (43%), Positives = 36/57 (63%)

Query:     9 DNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
             +NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct:   360 ENIRRAESLNGNPLFSKALADLVHSHIQSNKLCSTQLSLNCPLCVNPVCRKTKSFFT 416

GO:0004325 "ferrochelatase activity" evidence=ISO;IDA;IMP

GO:0005506 "iron ion binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IMP

GO:0006783 "heme biosynthetic process" evidence=ISO;IDA;IMP;TAS

GO:0008203 "cholesterol metabolic process" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009589 "detection of UV" evidence=IMP

GO:0010999 "regulation of eIF2 alpha phosphorylation by heme" evidence=IGI;IMP

GO:0016020 "membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0020037 "heme binding" evidence=IDA

GO:0030218 "erythrocyte differentiation" evidence=IMP

GO:0030350 "iron-responsive element binding" evidence=IDA

GO:0034379 "very-low-density lipoprotein particle assembly" evidence=IMP

GO:0046501 "protoporphyrinogen IX metabolic process" evidence=ISO;IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0046906 "tetrapyrrole binding" evidence=IDA

GO:0046984 "regulation of hemoglobin biosynthetic process" evidence=IGI

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0055072 "iron ion homeostasis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9V9S8	HEMH_DROME	4, ., 9, 9, ., 1, ., 1	0.5909	0.9565	0.1718	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	69
pfam00762	311	pfam00762, Ferrochelatase, Ferrochelatase	2e-07
PRK00035	333	PRK00035, hemH, ferrochelatase; Reviewed	5e-07
COG0276	320	COG0276, HemH, Protoheme ferro-lyase (ferrochelata	1e-05
PRK12435	311	PRK12435, PRK12435, ferrochelatase; Provisional	3e-05
TIGR00109	322	TIGR00109, hemH, ferrochelatase	0.003

>gnl|CDD|216106 pfam00762, Ferrochelatase, Ferrochelatase

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHL 35
           E+   +N RR    ND P FI+AL D+V  HL
Sbjct: 280 EEAGGENYRRIPCLNDSPAFIEALADLVREHL 311

Length = 311

>gnl|CDD|234585 PRK00035, hemH, ferrochelatase; Reviewed

 Score = 44.0 bits (105), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR 36
           E+   +  RR    ND P FI+AL D+V  +L+
Sbjct: 292 EEAGGEEFRRIPCLNDSPEFIEALADLVRENLQ 324

Length = 333

>gnl|CDD|223353 COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHL 35
           E+       R    ND P FIDAL D+V   L
Sbjct: 287 EEAGGKKYVRIPCLNDSPEFIDALADLVRELL 318

Length = 320

>gnl|CDD|183526 PRK12435, PRK12435, ferrochelatase; Provisional

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 13  RAAAPNDHPLFIDALVDIVSSHLRSK 38
           R   PN  PLFIDAL D+V   L+S 
Sbjct: 285 RPEMPNADPLFIDALADVVLKKLKSV 310

Length = 311

>gnl|CDD|232827 TIGR00109, hemH, ferrochelatase

 Score = 33.6 bits (77), Expect = 0.003
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHL 35
           E    D  +R  A N  P FI+A+  +V   L
Sbjct: 290 EDAGGDKYQRCPALNAKPEFIEAMATLVKKKL 321

Human ferrochelatase, found at the mitochondrial inner membrane inner surface, was shown in an active recombinant form to be a homodimer. This contrasts to an earlier finding by gel filtration that overexpressed E. coli ferrochelatase runs as a monomer [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 322

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
KOG1321|consensus	395		99.71
PLN02449	485	ferrochelatase	98.84
PF00762	316	Ferrochelatase: Ferrochelatase; InterPro: IPR00101	98.8
COG0276	320	HemH Protoheme ferro-lyase (ferrochelatase) [Coenz	98.69
PRK12435	311	ferrochelatase; Provisional	98.57
TIGR00109	322	hemH ferrochelatase. Human ferrochelatase, found a	98.53
PRK00035	333	hemH ferrochelatase; Reviewed	98.12
COG0276	320	HemH Protoheme ferro-lyase (ferrochelatase) [Coenz	85.57
PLN02757	154	sirohydrochlorine ferrochelatase	84.3
PRK12435	311	ferrochelatase; Provisional	83.56

>KOG1321|consensus

Probab=99.71  E-value=6.4e-18  Score=125.38  Aligned_cols=67  Identities=37%  Similarity=0.750  Sum_probs=63.7

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhcCCCCCcccCCCCCCCCCcchhhhHHHHhhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLC   68 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~~~~s~q~~~~Cp~c~~~~c~~~~~~f~~~~   68 (69)
                      .|.+.|++++.|+|+||++|.||++|||+|.+||.+.+.+|.|+..+||+|+||.|++.+.||++++
T Consensus       327 ~a~k~gve~~~Rv~sln~~p~fI~~lADlV~ehL~s~~~~s~q~l~~~~~~~ne~~~e~~s~~~~~~  393 (395)
T KOG1321|consen  327 EALKKGVENWKRVESLNGNPTFIEGLADLVAEHLKSNQAYSNQFLARCPGCSNEPCKEAKSWFGNHE  393 (395)
T ss_pred             HHHHHhhhhheeccCCCCCccHHHHHHHHHHHhhhhhhhcchhhhhhCcCcCChhhhHHHHHHHHhh
Confidence            4667889999999999999999999999999999999999999888899999999999999999986

>PLN02449 ferrochelatase

Probab=98.84  E-value=5.3e-09  Score=80.53  Aligned_cols=37  Identities=27%  Similarity=0.270  Sum_probs=34.3

Q ss_pred             ChhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhc
Q psy45             1 MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRS   37 (69)
Q Consensus         1 ~~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~   37 (69)
                      ++|+++|+++|.|+|+|||+|.||++|+++|.+++..
T Consensus       379 e~a~e~G~~~~~rVP~LN~~p~FI~~La~lV~~~l~~  415 (485)
T PLN02449        379 ELALESGIENWGRVPALGCEPTFISDLADAVIEALPY  415 (485)
T ss_pred             HHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHhhc
Confidence            3678999989999999999999999999999999875

>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc

Probab=98.80  E-value=3.6e-09  Score=76.97  Aligned_cols=34  Identities=38%  Similarity=0.566  Sum_probs=27.8

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHL   35 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l   35 (69)
                      +|+++|+++|.|+|+|||+|.||++|+++|.++|
T Consensus       283 ~~~~~G~~~~~~ip~lN~~~~fi~~La~~v~~~~  316 (316)
T PF00762_consen  283 LAEEAGGEEFVRIPCLNDSPEFIEALADLVREHL  316 (316)
T ss_dssp             HHHHHTCCEEEE---STT-HHHHHHHHHHHHHHH
T ss_pred             HHHHcCCceEEEeCCCCCCHHHHHHHHHHHHhCc
Confidence            5789999999999999999999999999998875

Ferrochelatase catalyses the last step in haem biosynthesis: the chelation of a ferrous ion to proto-porphyrin IX, to form protohaem [, ]. In eukaryotic cells, it binds to the mitochondrial inner membrane with its active site on the matrix side of the membrane. The X-ray structure of Bacillus subtilis and human ferrochelatase have been solved [, ]. The human enzyme exists as a homodimer. Each subunit contains one [2Fe-2S] cluster. The monomer is folded into two similar domains, each with a four-stranded parallel beta-sheet flanked by an alpha-helix in a beta-alpha-beta motif that is reminiscent of the fold found in the periplasmic binding proteins. The topological similarity between the domains suggests that they have arisen from a gene duplication event. However, significant differences exist between the two domains, including an N-terminal section (residues 80-130) that forms part of the active site pocket, and a C-terminal extension (residues 390-423) that is involved in coordination of the [2Fe-2S] cluster and in stabilisation of the homodimer. Ferrochelatase seems to have a structurally conserved core region that is common to the enzyme from bacteria, plants and mammals. Porphyrin binds in the identified cleft; this cleft also includes the metal-binding site of the enzyme. It is likely that the structure of the cleft region will have different conformations upon substrate binding and release [].; GO: 0004325 ferrochelatase activity, 0006783 heme biosynthetic process; PDB: 2QD3_B 2HRE_C 3HCN_B 2PNJ_A 2QD1_C 1HRK_A 2QD4_B 3AQI_B 2HRC_B 3HCO_B ....

>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]

Probab=98.69  E-value=1.7e-08  Score=74.43  Aligned_cols=35  Identities=37%  Similarity=0.459  Sum_probs=31.7

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      ++++.|+.+|.|+|||||+|.||++|+++|.+++.
T Consensus       285 ~~~~~Gg~~y~rip~lN~~p~fi~~la~lv~~~~~  319 (320)
T COG0276         285 LAEEAGGKKYVRIPCLNDSPEFIDALADLVRELLN  319 (320)
T ss_pred             HHHHhCCccEEecCCCCCCHHHHHHHHHHHHHHhc
Confidence            57899988999999999999999999999987753

>PRK12435 ferrochelatase; Provisional

Probab=98.57  E-value=6.2e-08  Score=70.55  Aligned_cols=34  Identities=38%  Similarity=0.689  Sum_probs=30.9

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      +|+++|++ |.|+|+|||+|.||++|+++|.+++.
T Consensus       275 ~a~~~G~~-~~r~~~lN~~p~fi~~La~lv~~~~~  308 (311)
T PRK12435        275 VTDEIGAK-YYRPEMPNADPLFIDALADVVLKKLK  308 (311)
T ss_pred             HHHHcCCc-EEeccCCCCCHHHHHHHHHHHHHHHh
Confidence            57899995 99999999999999999999988763

>TIGR00109 hemH ferrochelatase

Probab=98.53  E-value=8.9e-08  Score=69.65  Aligned_cols=34  Identities=32%  Similarity=0.489  Sum_probs=31.0

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHL   35 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l   35 (69)
                      .+++.|+++|.|+|+|||+|.||++|+++|.+++
T Consensus       288 ~~~~~G~~~~~~vp~lN~~p~fi~~l~~~v~~~~  321 (322)
T TIGR00109       288 VAEDAGGDKYQRCPALNAKPEFIEAMATLVKKKL  321 (322)
T ss_pred             HHHHcCCCeEEECCCCCCCHHHHHHHHHHHHHhh
Confidence            4678999889999999999999999999998764

Human ferrochelatase, found at the mitochondrial inner membrane inner surface, was shown in an active recombinant form to be a homodimer. This contrasts to an earlier finding by gel filtration that overexpressed E. coli ferrochelatase runs as a monomer.

>PRK00035 hemH ferrochelatase; Reviewed

Probab=98.12  E-value=3.2e-06  Score=61.05  Aligned_cols=35  Identities=37%  Similarity=0.586  Sum_probs=31.4

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      ++.+.|++.|.|+|+||++|.||++|+++|.+++.
T Consensus       290 ~~~~~G~~~~~~~~~ln~~~~~i~~l~~~v~~~~~  324 (333)
T PRK00035        290 IAEEAGGEEFRRIPCLNDSPEFIEALADLVRENLQ  324 (333)
T ss_pred             HHHHcCCceEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence            46789998899999999999999999999988763

>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]

Probab=85.57  E-value=1.3  Score=32.99  Aligned_cols=32  Identities=28%  Similarity=0.433  Sum_probs=28.3

Q ss_pred             CCCceEEccCCCCCHHHHHHHHHHHHHhhhcC
Q psy45             7 KVDNIRRAAAPNDHPLFIDALVDIVSSHLRSK   38 (69)
Q Consensus         7 G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~   38 (69)
                      |...+.-|+...++|.||+++|+.|.+++++-
T Consensus       149 ~~~~i~~I~~~~~~p~yI~a~a~~I~~~~~~~  180 (320)
T COG0276         149 GQPKISTIPDYYDEPLYIEALADSIREKLAKH  180 (320)
T ss_pred             CCCceEEecCccCChHHHHHHHHHHHHHHHhc
Confidence            44469999999999999999999999998774

>PLN02757 sirohydrochlorine ferrochelatase

Probab=84.30  E-value=2.7  Score=27.89  Aligned_cols=31  Identities=23%  Similarity=0.196  Sum_probs=27.3

Q ss_pred             CCCceEEccCCCCCHHHHHHHHHHHHHhhhcC
Q psy45             7 KVDNIRRAAAPNDHPLFIDALVDIVSSHLRSK   38 (69)
Q Consensus         7 G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~   38 (69)
                      |+ +|...+.|+++|.+++.|.+.+.+++...
T Consensus       105 ~~-~i~~~~pLG~~p~l~~ll~~Ri~eal~~~  135 (154)
T PLN02757        105 GV-KYLVTAPIGLHELMVDVVNDRIKYCLSHV  135 (154)
T ss_pred             Cc-EEEECCCCCCCHHHHHHHHHHHHHHhhcc
Confidence            44 58999999999999999999999888665

>PRK12435 ferrochelatase; Provisional

Probab=83.56  E-value=1.6  Score=31.94  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=26.5

Q ss_pred             CCCceEEccCCCCCHHHHHHHHHHHHHhhhc
Q psy45             7 KVDNIRRAAAPNDHPLFIDALVDIVSSHLRS   37 (69)
Q Consensus         7 G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~   37 (69)
                      +...+..++...++|.||++|++.|.+++..
T Consensus       136 ~~~~~~~i~~~~~~p~yi~a~a~~I~~~l~~  166 (311)
T PRK12435        136 GGPTITSIESWYDEPKFIQYWADQIKETFAQ  166 (311)
T ss_pred             CCCeEEEeCCccCChHHHHHHHHHHHHHHHH
Confidence            3446889999999999999999999888743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	69
3aqi_A	359	H240a Variant Of Human Ferrochelatase Length = 359		2e-09
2po7_A	359	Crystal Structure Of Human Ferrochelatase Mutant Wi		2e-09
1hrk_A	359	Crystal Structure Of Human Ferrochelatase Length =		2e-09
2qd3_A	359	Wild Type Human Ferrochelatase Crystallized With Am		2e-09
2qd2_A	359	F110a Variant Of Human Ferrochelatase With Protohem		2e-09
2po5_A	359	Crystal Structure Of Human Ferrochelatase Mutant Wi		2e-09
2pnj_A	359	Crystal Structure Of Human Ferrochelatase Mutant Wi		2e-09
2hre_A	359	Structure Of Human Ferrochelatase Variant E343k Wit		2e-09
4f4d_A	359	F337r Variant Of Human Ferrochelatase Length = 359		2e-09

>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 341 Replaced By Cys Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium Sulfate Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 263 Replaced By Cys Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe 337 Replaced By Ala Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With Protoporphyrin Ix Bound Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 8   VDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFS 65
           V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +F+
Sbjct: 298 VENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFT 355

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	69
3hcn_A	359	Ferrochelatase, mitochondrial; metal selectivity,	7e-20
1lbq_A	362	Ferrochelatase; rossmann fold, PI-helix, lyase; 2.	6e-16
2h1v_A	310	Ferrochelatase; rossman fold, PI-helix, lyase; 1.2	5e-08

>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Length = 359

 Score = 79.6 bits (197), Expect = 7e-20
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           ++  V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +
Sbjct: 294 KECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSF 353

Query: 64  FS 65
           F+
Sbjct: 354 FT 355

>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Length = 362

 Score = 68.8 bits (169), Expect = 6e-16
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 3   EEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCV-NPKCSQAK 61
            E    D  +R  + N +  FI+ + D+V SHL+S    + +          N       
Sbjct: 294 GESEYKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLS 353

Query: 62  QWFSQ 66
             F  
Sbjct: 354 LVFGN 358

>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Length = 310

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 10  NIRRAAAPNDHPLFIDALVDIVSSHL 35
           +  R   PN  P FIDAL  +V   L
Sbjct: 283 SYYRPEMPNAKPEFIDALATVVLKKL 308

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	69
3hcn_A	359	Ferrochelatase, mitochondrial; metal selectivity,	99.83
1lbq_A	362	Ferrochelatase; rossmann fold, PI-helix, lyase; 2.	99.63
2h1v_A	310	Ferrochelatase; rossman fold, PI-helix, lyase; 1.2	98.24
2xvy_A	269	Chelatase, putative; metal binding protein; HET: H	96.62
2jh3_A	474	Ribosomal protein S2-related protein; CBIX, SAD ph	88.73
2h1v_A	310	Ferrochelatase; rossman fold, PI-helix, lyase; 1.2	86.32
1lbq_A	362	Ferrochelatase; rossmann fold, PI-helix, lyase; 2.	85.18
2xwp_A	264	Sirohydrochlorin cobaltochelatase; lyase, beta-alp	83.72
3hcn_A	359	Ferrochelatase, mitochondrial; metal selectivity,	82.73
3lyh_A	126	Cobalamin (vitamin B12) biosynthesis CBIX protein;	82.19

>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*

Probab=99.83  E-value=4.1e-21  Score=140.52  Aligned_cols=68  Identities=38%  Similarity=0.689  Sum_probs=64.5

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhcCCCCCcccCCCCCCCCCcchhhhHHHHhhhhC
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLCA   69 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~~~~s~q~~~~Cp~c~~~~c~~~~~~f~~~~~   69 (69)
                      +|.++|+++|.|+|+|||+|.||++|+++|.+++.+++.+|.|+.++||+|+|++|..+|+||+++|.
T Consensus       292 ~a~e~G~~~~~rip~LNd~p~fi~~La~lv~~~l~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~  359 (359)
T 3hcn_A          292 LAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL  359 (359)
T ss_dssp             HHHHTCCCEEEECCCSTTCHHHHHHHHHHHHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTSCC
T ss_pred             HHHhCCCceEEEcCCCCCCHHHHHHHHHHHHHHHhcCCccCcccCCCCCCCCchhhHHHHHHHhhcCC
Confidence            46799998899999999999999999999999999999999999999999999999999999999874

>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A

Probab=99.63  E-value=3.2e-17  Score=119.80  Aligned_cols=65  Identities=20%  Similarity=0.238  Sum_probs=60.2

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhcCCCCCcccCCCCCCC-CCcchhhhHHHHhhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHC-VNPKCSQAKQWFSQLC   68 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~~~~s~q~~~~Cp~c-~~~~c~~~~~~f~~~~   68 (69)
                      +|.++|+  |.|+|+|||+|.||++|+++|.+++.+...+|.|+.++||+| +|++|+.+|+||+.++
T Consensus       295 ~~~~~G~--~~~~p~Ln~~p~fi~~L~~lv~~~l~~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~  360 (362)
T 1lbq_A          295 ESEYKDK--FKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE  360 (362)
T ss_dssp             TCTTGGG--EEECCCCTTCHHHHHHHHHHHHHHHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCCC
T ss_pred             HHHhCCC--EEEcCCCCCCHHHHHHHHHHHHHHhccCCCcccccCCCCCCCCcCchhhhHHHHhhccc
Confidence            4678894  999999999999999999999999998889999988889999 7999999999999875

>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A

Probab=98.24  E-value=6.5e-07  Score=63.50  Aligned_cols=34  Identities=32%  Similarity=0.539  Sum_probs=30.1

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      ++.++|+ +|.|+|+||++|.||++|+++|.+++.
T Consensus       276 ~~~~~G~-~~~~~p~ln~~p~~i~~l~~~v~~~l~  309 (310)
T 2h1v_A          276 VTDDIGA-SYYRPEMPNAKPEFIDALATVVLKKLG  309 (310)
T ss_dssp             HHHHHTC-EEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred             HHHHcCC-eEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence            4678997 599999999999999999999988763

>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*

Probab=96.62  E-value=0.00098  Score=45.28  Aligned_cols=34  Identities=3%  Similarity=-0.027  Sum_probs=29.0

Q ss_pred             hhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             3 EEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         3 A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      +.++|++.+.++|+||++|.|++.|++.+.+++.
T Consensus       233 ~~~~g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~~  266 (269)
T 2xvy_A          233 LARRGIEAKPVLHGTAESDAVAAIWLRHLDDALA  266 (269)
T ss_dssp             HHHTTCEEEECCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred             HHHcCcEEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence            3477997666999999999999999999987763

>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}

Probab=88.73  E-value=0.21  Score=37.51  Aligned_cols=32  Identities=6%  Similarity=0.208  Sum_probs=27.8

Q ss_pred             cCCCceEEccCCCCCHHHHHHHHHHHHHhhhcC
Q psy45             6 LKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSK   38 (69)
Q Consensus         6 ~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~   38 (69)
                      .|+ .|.+++.||++|.|++.|++.|.+++...
T Consensus       237 ~G~-~v~~~~~LG~~p~~~~ll~~rv~eal~~~  268 (474)
T 2jh3_A          237 QAP-PLHVGGPVGEHPAVAEVVLALAAEGREDE  268 (474)
T ss_dssp             TCC-CEEECCCGGGSTTHHHHHHHHHHTTCSCS
T ss_pred             CCc-EEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            477 59999999999999999999998877544

>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A

Probab=86.32  E-value=0.93  Score=31.71  Aligned_cols=28  Identities=25%  Similarity=0.254  Sum_probs=25.3

Q ss_pred             CceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             9 DNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         9 ~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      ..+.-++.+.++|.||+++++.|.+++.
T Consensus       139 ~~i~~i~~~~~~p~~i~a~a~~i~~~l~  166 (310)
T 2h1v_A          139 LTITSVESWYDEPKFVTYWVDRVKETYA  166 (310)
T ss_dssp             CEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CeEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            4699999999999999999999988774

>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A

Probab=85.18  E-value=0.93  Score=32.75  Aligned_cols=28  Identities=11%  Similarity=0.078  Sum_probs=24.7

Q ss_pred             ceEEccCCCCCHHHHHHHHHHHHHhhhc
Q psy45            10 NIRRAAAPNDHPLFIDALVDIVSSHLRS   37 (69)
Q Consensus        10 ~~~Rvp~LNd~p~fI~aLadlV~~~l~~   37 (69)
                      .+..++...++|.||++|++.|.+++..
T Consensus       161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~  188 (362)
T 1lbq_A          161 SWSVIDRWPTNEGLIKAFSENITKKLQE  188 (362)
T ss_dssp             EEEEECCCTTCHHHHHHHHHHHHHHHHT
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            3668999999999999999999888754

>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*

Probab=83.72  E-value=0.74  Score=31.15  Aligned_cols=33  Identities=9%  Similarity=0.123  Sum_probs=27.6

Q ss_pred             hhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             4 EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         4 ~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      .+.|++.+..++.||++|.+++.+.+-+.+.+.
T Consensus       225 ~~~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~  257 (264)
T 2xwp_A          225 NAAGIPATPWLSGLGENPAIRAMFVAHLHQALN  257 (264)
T ss_dssp             HHTTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred             HHcCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence            366886556789999999999999999988764

>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*

Probab=82.73  E-value=1.4  Score=31.95  Aligned_cols=28  Identities=18%  Similarity=0.203  Sum_probs=25.1

Q ss_pred             ceEEccCCCCCHHHHHHHHHHHHHhhhc
Q psy45            10 NIRRAAAPNDHPLFIDALVDIVSSHLRS   37 (69)
Q Consensus        10 ~~~Rvp~LNd~p~fI~aLadlV~~~l~~   37 (69)
                      .+.-++...++|.||+++++.|.+++..
T Consensus       156 ~~~~i~~~~~~p~yI~a~a~~I~~~l~~  183 (359)
T 3hcn_A          156 KWSTIDRWPTHHLLIQCFADHILKELDH  183 (359)
T ss_dssp             EEEEECCCTTCHHHHHHHHHHHHHHHTT
T ss_pred             ceEEeCCccCCHHHHHHHHHHHHHHHHh
Confidence            4778999999999999999999988854

>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}

Probab=82.19  E-value=1.2  Score=26.63  Aligned_cols=31  Identities=29%  Similarity=0.322  Sum_probs=26.4

Q ss_pred             CCCceEEccCCCCCHHHHHHHHHHHHHhhhcC
Q psy45             7 KVDNIRRAAAPNDHPLFIDALVDIVSSHLRSK   38 (69)
Q Consensus         7 G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~   38 (69)
                      |+ .+...+.|+.+|.+++.|++.+.+++.+.
T Consensus        94 ~~-~i~~~~~LG~~p~l~~~l~~ri~~al~~~  124 (126)
T 3lyh_A           94 GV-TIRLAEPIGKNPRLGLAIRDVVKEELERS  124 (126)
T ss_dssp             TC-EEEECCCGGGSHHHHHHHHHHHHHHHHHC
T ss_pred             Cc-eEEEcCCCCCChHHHHHHHHHHHHHHhcc
Confidence            66 47788999999999999999998887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	69
d2hrca1	359	c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sa	9e-17
d1lbqa_	356	c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Sacch	9e-10
d2hk6a1	309	c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtil	1e-05

>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Length = 359

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 9e-17
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 4   EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQW 63
           ++  V+NIRRA + N +PLF  AL D+V SH++S    + +    CP CVNP C + K +
Sbjct: 294 KECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSF 353

Query: 64  FS 65
           F+
Sbjct: 354 FT 355

>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 356

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (119), Expect = 9e-10
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 1   MAEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVN 54
           +  E    D  +R  + N +  FI+ + D+V SHL+S    + +         +
Sbjct: 288 VIGESEYKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKS 341

>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Length = 309

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Bacillus subtilis [TaxId: 1423]

 Score = 38.6 bits (89), Expect = 1e-05
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 10  NIRRAAAPNDHPLFIDALVDIVSSHL 35
           +  R   PN  P FIDAL  +V   L
Sbjct: 282 SYYRPEMPNAKPEFIDALATVVLKKL 307

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	69
d2hrca1	359	Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]	99.68
d1lbqa_	356	Ferrochelatase {Baker's yeast (Saccharomyces cerev	99.1
d2hk6a1	309	Ferrochelatase {Bacillus subtilis [TaxId: 1423]}	98.65
d2hk6a1	309	Ferrochelatase {Bacillus subtilis [TaxId: 1423]}	85.61

>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.4e-17  Score=119.03  Aligned_cols=66  Identities=39%  Similarity=0.722  Sum_probs=62.2

Q ss_pred             hhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhcCCCCCcccCCCCCCCCCcchhhhHHHHhhhh
Q psy45             3 EEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVNPKCSQAKQWFSQLC   68 (69)
Q Consensus         3 A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~~~~s~q~~~~Cp~c~~~~c~~~~~~f~~~~   68 (69)
                      ++++|+++|.|+|+|||+|.||++|+++|.+++.+++..|++...+||.|+++.|+.+|.||++++
T Consensus       293 ~~~~G~~~~~~vp~lN~~p~fi~~la~lv~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~  358 (359)
T d2hrca1         293 AKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQ  358 (359)
T ss_dssp             CSSSCCSEEEECCCSTTCHHHHHHHHHHHHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTCC
T ss_pred             HHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccCCCCCCCCCcccHHHHhccccCC
Confidence            468999899999999999999999999999999999989988788899999999999999999876

>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=6.7e-12  Score=89.55  Aligned_cols=63  Identities=21%  Similarity=0.273  Sum_probs=52.3

Q ss_pred             hhcCCCceEEccCCCCCHHHHHHHHHHHHHhhhcCCCCCcccCCCCCCCCC-cchhhhHHHHhh
Q psy45             4 EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLRSKTKINPKFLNRCPHCVN-PKCSQAKQWFSQ   66 (69)
Q Consensus         4 ~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~~~~~~s~q~~~~Cp~c~~-~~c~~~~~~f~~   66 (69)
                      .+.|+..|.|+|||||+|.||++|+++|.+++.+++..|.|+..+|+.|++ +.-+-+-..||+
T Consensus       291 ~~~gg~~f~~vp~lN~~p~fi~~La~lV~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  354 (356)
T d1lbqa_         291 ESEYKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGN  354 (356)
T ss_dssp             TCTTGGGEEECCCCTTCHHHHHHHHHHHHHHHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBC
T ss_pred             HHhCCCeEEEcCCCCCCHHHHHHHHHHHHHHhccCcccCcccccccccCcCCCcccChHHhccC
Confidence            356777899999999999999999999999999999999998888998874 445555555553

>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Bacillus subtilis [TaxId: 1423]

Probab=98.65  E-value=6.9e-09  Score=72.26  Aligned_cols=34  Identities=32%  Similarity=0.539  Sum_probs=31.1

Q ss_pred             hhhhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             2 AEEQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         2 ~A~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      +|++.|+ +|.|+|+|||+|.||++|+++|.++|.
T Consensus       275 ~~~~~G~-~~~rip~lN~~~~fi~~La~lv~~~L~  308 (309)
T d2hk6a1         275 VTDDIGA-SYYRPEMPNAKPEFIDALATVVLKKLG  308 (309)
T ss_dssp             HHHHHTC-EEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred             HHHHcCC-CEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            5789999 599999999999999999999999874

>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.61  E-value=0.38  Score=32.15  Aligned_cols=33  Identities=27%  Similarity=0.263  Sum_probs=27.6

Q ss_pred             hhcCCCceEEccCCCCCHHHHHHHHHHHHHhhh
Q psy45             4 EQLKVDNIRRAAAPNDHPLFIDALVDIVSSHLR   36 (69)
Q Consensus         4 ~e~G~~~~~Rvp~LNd~p~fI~aLadlV~~~l~   36 (69)
                      ++.+...+.-|+..-++|.||+++++.|.+++.
T Consensus       133 ~~~~~~~~~~I~~~~~~p~yi~a~a~~I~~~~~  165 (309)
T d2hk6a1         133 EKLGGLTITSVESWYDEPKFVTYWVDRVKETYA  165 (309)
T ss_dssp             HHHCSCEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             hhccCCceEEecccCCChhHHHHHHHHHHHHHH
Confidence            344555688899999999999999999988774