Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 1058 TLREEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFI-FHCA 1116
Query: 65 NK 66
K
Sbjct: 1117 MK 1118
Orphan receptor. May be required for normal differentiation of promyelinating Schwann cells and for normal myelination of axons. Signals probably through G-proteins to transiently elevate cAMP levels. Homo sapiens (taxid: 9606)
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 12 RDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCTNK 66
R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C K
Sbjct: 1035 RNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFI-FHCAMK 1088
Orphan receptor. May be required for normal differentiation of promyelinating Schwann cells and for normal myelination of axons. Signals probably through G-proteins to transiently elevate cAMP levels.
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 22 LIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCTNKMIRNLFKSSSSINRP 81
I+G TW +G+ + Y F +N+LQGVFIFL + ++ +R ++ S R
Sbjct: 732 FILGCTWCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYRKWSKGFRK 791
Query: 82 IRPAS 86
+R S
Sbjct: 792 LRTES 796
Cell surface receptor that binds to the chondroitin sulfate moiety of glycosaminoglycan chains and promotes cell attachment. Promotes granulocyte chemotaxis, degranulation and adhesion. In macrophages, promotes the release of inflammatory cytokines, including IL8 and TNF.
Macaca mulatta (taxid: 9544)
Close Homologs in the Non-Redundant Database Detected by BLAST
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%)
Query: 4 ITASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTC 63
+T S QR LYV+L IMGLTW G A D E LWY FI +N+LQG FI +AF C
Sbjct: 198 VTKPKSDQRQLWLYVKLTCIMGLTWIFGFVAAAFDLEVLWYLFIVVNSLQGAFICVAFVC 257
Query: 64 TNKMIRNL 71
T +++ L
Sbjct: 258 TRNVVKLL 265
Source: Capitella teleta
Species: Capitella teleta
Genus: Capitella
Family: Capitellidae
Order: Capitellida
Class: Polychaeta
Phylum: Annelida
Superkingdom: Eukaryota
>gi|328719879|ref|XP_003246889.1| PREDICTED: hypothetical protein LOC100570135 [Acyrthosiphon pisum]
Score = 108 (43.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 1027 TLREEVLRNLRSVVSLTFLLGMTWGFSFFAWGPLNVPFMYLFSIFNSLQGLFIFI-FHCA 1085
Query: 65 NK 66
K
Sbjct: 1086 MK 1087
Score = 108 (43.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 1058 TLREEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNVPFMYLFSIFNSLQGLFIFI-FHCA 1116
Query: 65 NK 66
K
Sbjct: 1117 MK 1118
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 992 TLREEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFI-FHCA 1050
Query: 65 NK 66
K
Sbjct: 1051 MK 1052
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 1028 TLREEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFI-FHCA 1086
Query: 65 NK 66
K
Sbjct: 1087 MK 1088
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 5 TASSSTQRDFRLYVRLALIMGLTWSVGLFAGYIDNEPLWYAFIALNTLQGVFIFLAFTCT 64
T R+ R V L ++G+TW FA N P Y F N+LQG+FIF+ F C
Sbjct: 1058 TLREEVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFI-FHCA 1116
Query: 65 NK 66
K
Sbjct: 1117 MK 1118
>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)
They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 3L2J_A 1BL1_A.
class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]
