Psyllid ID: psy4670

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---
Protein Sequence
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Secondary Structure (PSIPRED)
ccccccccccHHHccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEccccEccccHHHHcccHHHccccccccHHcccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHcccccccEEEEEEccccccccHHHHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHcccccccEEEEccccccccccHHHHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccHHHccHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mnillkrgcnfQLCSNLLKYGQAVvknpqskknslgffspgltrwSSQVATTLsenvakpnildkptritgYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFgeklprnsAEWIEEFNlykeypefklknkdiTLEEFKRIWWMEYLHRMWGRcigaaffipasiFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGledrfhiqsdvprvsQYRLASHLSMAFLLYSGLLWTALDhllpsskqlADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLsenvakpnilekptritgyWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFgeklprnsAEWIEEFNlykeypefklqniGLMGWYMVQSgledrfhtqsdvprvsqYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSgledrfhtqsdvprvsqYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLdaglvynsfplmadrliptdilalepplrnftenpttvqfdhrvLGISVFSLLTAQYWMGrklklpgranlALTCVTGMAYMQ
Flexible Loop (DISEMBL)
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGFFSPGLTRWSSQVATTlsenvakpnildkptRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNlykeypefklknkditLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATtlsenvakpnilekptRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGrklklpgranLALTCVTGMAYMQ
Low Complexity Region (SEG)
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Disordered region (IsUnstruct)
**ILLKRGCNFQLCSNLLKYGQAVVKN******SLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAY**
Disordered Region (DISOPRED)
*********************************************************************TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFH*QSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSS******RAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Disordered Region (DISEMBL)
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Disordered Region (DISPRO)
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGF**P*************************PTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATT************KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNILLKRGCNFQLCSNLLKYGQAVVKNPQSKKNSLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	643	2.2.26 [Sep-21-2011]
Q08DG6	413	Cytochrome c oxidase asse	yes	N/A	0.460	0.716	0.457	5e-65
Q7KZN9	410	Cytochrome c oxidase asse	yes	N/A	0.460	0.721	0.439	1e-63
Q8BJ03	413	Cytochrome c oxidase asse	yes	N/A	0.460	0.716	0.445	7e-62
Q9FKT8	457	Cytochrome c oxidase asse	yes	N/A	0.463	0.652	0.385	6e-48
Q2Y9R4	356	Heme A synthase OS=Nitros	yes	N/A	0.474	0.856	0.369	6e-45
P40086	486	Cytochrome c oxidase asse	yes	N/A	0.356	0.471	0.432	3e-44
Q10361	616	Electron transfer protein	yes	N/A	0.474	0.495	0.341	7e-41
Q0AIG6	356	Heme A synthase OS=Nitros	yes	N/A	0.343	0.620	0.421	4e-40
Q82X64	356	Heme A synthase OS=Nitros	yes	N/A	0.418	0.755	0.344	5e-39
Q2W552	354	Heme A synthase OS=Magnet	yes	N/A	0.345	0.627	0.418	3e-38

>sp|Q08DG6|COX15_BOVIN Cytochrome c oxidase assembly protein COX15 homolog OS=Bos taurus GN=COX15 PE=2 SV=1

 Score =  249 bits (636), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 205/341 (60%), Gaps = 45/341 (13%)

Query: 308 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 366
           R+ G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct: 70  RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSKEEWEAEFQKYQQ 129

Query: 367 YPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLW---TA 423
           +PEFK+ N                 H  +         LA    + ++ YS  +W     
Sbjct: 130 FPEFKILN-----------------HDMT---------LAEFKFIWYMEYSHRMWGRLVG 163

Query: 424 LDHLLPSSKQLADNRAGLLRFKRLAYMSKGLI-FVTALSGENMLRGLMGWYMVQSGLEDR 482
           L ++LP++            F +  ++++GL   V AL G    +GL+GWYMV+SGLE++
Sbjct: 164 LAYILPAAY-----------FWKKGWLTRGLKGRVLALCGLVCFQGLLGWYMVKSGLEEK 212

Query: 483 FHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYM 542
             +  D+PRVSQYRLA+HL  A +LY   LWT+L  LLP  K L + R  LLR +R A+ 
Sbjct: 213 PDSH-DIPRVSQYRLAAHLGSALVLYCASLWTSLSLLLPQHK-LTETRQ-LLRLRRFAHG 269

Query: 543 SKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDH 602
           + GL+F+TALSGAFVAGLDAGLVYNSFP M +  IP D+    P LRN  ENPT VQFDH
Sbjct: 270 TAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESWIPEDLFTFSPLLRNVFENPTMVQFDH 329

Query: 603 RVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           RVLGI+  + +T  Y++ R++ LP R  +A T +  +AY Q
Sbjct: 330 RVLGIASVTAVTVLYFLSRRIPLPRRTKIAATTLLALAYTQ 370

May be involved in the biosynthesis of heme A.
Bos taurus (taxid: 9913)

>sp|Q7KZN9|COX15_HUMAN Cytochrome c oxidase assembly protein COX15 homolog OS=Homo sapiens GN=COX15 PE=1 SV=1

 Score =  244 bits (624), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 45/341 (13%)

Query: 308 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 366
           R+ G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct: 67  RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126

Query: 367 YPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLW---TA 423
           +PEFK+ N                 H  +    +++++      + ++ YS  +W     
Sbjct: 127 FPEFKILN-----------------HDMT----LTEFKF-----IWYMEYSHRMWGRLVG 160

Query: 424 LDHLLPSSKQLADNRAGLLRFKRLAYMSKGLI-FVTALSGENMLRGLMGWYMVQSGLEDR 482
           L ++LP++            F R  ++S+G+   V AL G    +GL+GWYMV+SGLE++
Sbjct: 161 LVYILPAAY-----------FWRKGWLSRGMKGRVLALCGLVCFQGLLGWYMVKSGLEEK 209

Query: 483 FHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYM 542
             +  D+PRVSQYRLA+HL  A +LY   LWT+L  LLP  K    ++  LL+ +R A+ 
Sbjct: 210 SDSH-DIPRVSQYRLAAHLGSALVLYCASLWTSLSLLLPPHKLPETHQ--LLQLRRFAHG 266

Query: 543 SKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDH 602
           + GL+F+TALSGAFVAGLDAGLVYNSFP M +  IP D+    P LRN  ENPT VQFDH
Sbjct: 267 TAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESWIPEDLFTFSPILRNVFENPTMVQFDH 326

Query: 603 RVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           R+LGI+  + +T  Y++ R++ LP R  +A   +  +AY Q
Sbjct: 327 RILGITSVTAITVLYFLSRRIPLPRRTKMAAVTLLALAYTQ 367

May be involved in the biosynthesis of heme A.

Homo sapiens (taxid: 9606)

>sp|Q8BJ03|COX15_MOUSE Cytochrome c oxidase assembly protein COX15 homolog OS=Mus musculus GN=Cox15 PE=2 SV=1

 Score =  239 bits (609), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 152/341 (44%), Positives = 202/341 (59%), Gaps = 45/341 (13%)

Query: 308 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 366
           R  G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct: 70  RAVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQKYQQ 129

Query: 367 YPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLW---TA 423
           +PEFK+ N                 H  +         LA    + ++ YS  +W     
Sbjct: 130 FPEFKILN-----------------HDMT---------LAEFKFIWYMEYSHRMWGRAVG 163

Query: 424 LDHLLPSSKQLADNRAGLLRFKRLAYMSKGLI-FVTALSGENMLRGLMGWYMVQSGLEDR 482
           L ++LP++            F R  ++++G+   V AL G    +GL+GWYMV+SGLE++
Sbjct: 164 LAYILPAAY-----------FWRKGWLNRGMKGRVLALCGLVCFQGLLGWYMVKSGLEEK 212

Query: 483 FHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYM 542
             +  D+PRVSQYRLA+HL  A +LY   LWT+L  LLP  K L + R  LL  +R A  
Sbjct: 213 PESY-DIPRVSQYRLAAHLGSALVLYCASLWTSLSLLLPQHK-LPETRQ-LLWLRRFAGG 269

Query: 543 SKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDH 602
           + GL+F+TALSGAFVAGLDAGLVYNSFP M +  IP D+L   P L+N  ENPT VQFDH
Sbjct: 270 TAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESWIPEDLLTFSPVLKNVFENPTMVQFDH 329

Query: 603 RVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           R+LG++  + +T  Y++ R++ LP R  +A   +  +AY Q
Sbjct: 330 RLLGVTSVTAITVLYFLSRRIPLPRRTKMAAVTLLALAYAQ 370

May be involved in the biosynthesis of heme A.

Mus musculus (taxid: 10090)

>sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15 OS=Arabidopsis thaliana GN=COX15 PE=2 SV=1

 Score =  192 bits (488), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/335 (38%), Positives = 175/335 (52%), Gaps = 37/335 (11%)

Query: 311 GYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEF 370
           G WL G +  VF  VVLGGVTRLT SGLSM  WK  GE  P +   W +EF  YK+ PE+
Sbjct: 100 GIWLFGSAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGEFPPLSDEAWAKEFEKYKQSPEY 159

Query: 371 KLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPS 430
           K  N G+         LED             ++    +  A  ++   L   +   LP 
Sbjct: 160 KRVNKGM--------NLED-------------FKFIYWMEYAHRMWGRGL--GIMFALPF 196

Query: 431 SKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVP 490
           S  L   R G +   RL     GL  + A       +G +GW+MV+SGLE+   ++   P
Sbjct: 197 SYFL---RKGYITL-RLGVQLSGLFALGAG------QGFIGWWMVKSGLEEP-PSEYSQP 245

Query: 491 RVSQYRLASHLSMAFLLYSGLLWTALDHLLPS--SKQLADNRAGLLRFKRLAYMSKGLIF 548
           RVS YRLA+HL+ AF +Y GL WTAL  ++P   ++ LA  R G  + K+LA     ++ 
Sbjct: 246 RVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVR-GAAKVKKLALPVSLIVG 304

Query: 549 VTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGIS 608
           +TA+SGAFVAG DAG  +N+FP M D  IP +I  ++P LRNF EN  TVQ DHR+L  +
Sbjct: 305 ITAISGAFVAGNDAGRAFNTFPKMGDTWIPDNIFEMKPLLRNFFENTATVQLDHRLLATT 364

Query: 609 VFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
               +   +W  RKL +       +    GM  +Q
Sbjct: 365 TLIAIGTMWWFTRKLDIHPAVKALIGSTVGMTAVQ 399

May be involved in the biosynthesis of heme A.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2Y9R4|CTAA_NITMU Heme A synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ctaA PE=3 SV=1

 Score =  182 bits (462), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 184/357 (51%), Gaps = 52/357 (14%)

Query: 291 TTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFGEK 349
           +TL +   +   ++KP  I   WL  C  +VF  VV+GGVTRLT+SGLS+V W+ L G  
Sbjct: 7   STLPQKTDQKFAVQKPIAI---WLFVCCALVFAMVVVGGVTRLTDSGLSIVEWQPLVGTV 63

Query: 350 LPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHL 409
            P +  +W E F  Y + P++K  N+G+           + FH            L   +
Sbjct: 64  PPLSQNDWDELFEKYHQTPQYKKVNLGMSLEEFKTIFWWEYFHR----------LLGRVI 113

Query: 410 SMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGL 469
            +AF +           L    K+  D   GL    +L+    G+  + AL G       
Sbjct: 114 GLAFFI---------PFLYFLMKKAVDRPLGL----KLS----GIFLLGALQGG------ 150

Query: 470 MGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADN 529
           MGWYMV+SGL D        P VSQYRL +HL +AF +Y+ + W ALD L P  + L+ N
Sbjct: 151 MGWYMVKSGLVDN-------PHVSQYRLTAHLGLAFAIYAAMFWVALDLLNPG-RGLSAN 202

Query: 530 RA--GLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPP 587
               GLL F     M   L+F+  LSG FVAG+ AGL YN+FPLM    IP ++  LEP 
Sbjct: 203 SGLRGLLNFST---MLSALVFIMVLSGGFVAGIRAGLAYNTFPLMDGHFIPPELFMLEPW 259

Query: 588 LRNFTENPTTVQFDHRVLGISVFSLLTAQYWM-GRKLKLPGRANLALTCVTGMAYMQ 643
            RNF +N TTVQFDHR++  ++ ++L   +W+  R + L G A LA T +  M  +Q
Sbjct: 260 YRNFFDNMTTVQFDHRLIAWTL-AILVPIFWLKSRAVPLSGSARLACTLLLIMLAVQ 315

Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group.

Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848)

EC: 1

EC: .

EC: 3

EC: .

EC: -

EC: .

EC: -

>sp|P40086|COX15_YEAST Cytochrome c oxidase assembly protein COX15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COX15 PE=1 SV=1

 Score =  180 bits (457), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/252 (43%), Positives = 149/252 (59%), Gaps = 23/252 (9%)

Query: 52  TLSENVAKPNILD---------KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVT 102
           +LS  V KP++           K ++   YWL+G SG+VFG VVLGG+TRLTESGLS+  
Sbjct: 59  SLSSPVFKPHVASESNPIESRLKTSKNVAYWLIGTSGLVFGIVVLGGLTRLTESGLSITE 118

Query: 103 WK-LFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGA 161
           WK + G   P N  EW EEF  YKE PEFKL N  I L+EFK I++ME++HR+WGR IGA
Sbjct: 119 WKPVTGTLPPMNQKEWEEEFIKYKESPEFKLLNSHIDLDEFKFIFFMEWIHRLWGRAIGA 178

Query: 162 AFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLE-DRFHIQSDVPRVS 220
            F +PA  F      +  + KR+     L+  QG +GW+MV+SGL+ ++   +   P VS
Sbjct: 179 VFILPAVYFAVSKKTSGHVNKRLFGLAGLLGLQGFVGWWMVKSGLDQEQLDARKSKPTVS 238

Query: 221 QYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKG-------- 272
           QYRL +HL  AF LY G+LWT L+ +L   K + +    +  FK+L   + G        
Sbjct: 239 QYRLTTHLGTAFFLYMGMLWTGLE-ILRECKWIKNPVQAISLFKKLDNPAIGPMRKISLA 297

Query: 273 ---LIFVTALSG 281
              + F+TA+SG
Sbjct: 298 LLAVSFLTAMSG 309

Required for the assembly of yeast cytochrome oxidase. Involved in the biosynthesis of heme A and the initial step in this pathway, the hydroxylation of heme O, is thought to be catalyzed by a three-component mono-oxygenase consisting of COX15, ferredoxin and ferredoxin reductase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=etp1 PE=1 SV=2

 Score =  169 bits (428), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 179/366 (48%), Gaps = 61/366 (16%)

Query: 306 PTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFGEKLPRNSAEWIEEFNLY 364
           P++   +WLLG S +V   VV+GG+TRLTESGLS+  WK + G   P    +W +EF LY
Sbjct: 94  PSKKVAFWLLGSSALVLAIVVVGGITRLTESGLSITEWKPITGVIPPLTDEQWNQEFELY 153

Query: 365 KEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTAL 424
           K+ PEF+  N  +           + FH                     +L  G+    L
Sbjct: 154 KKSPEFEKLNSHMTVDEFKNIFFWEWFHR--------------------VLGRGI---GL 190

Query: 425 DHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFH 484
             LLPS   +   RA         ++SK LI +T L G   L+G++GW+MV+SGL +   
Sbjct: 191 TILLPSIYMIVTKRAS-------PWLSKRLIGLTGLVG---LQGVIGWWMVKSGLSEELF 240

Query: 485 TQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLP----------SSKQLADNRAGLL 534
           +    PRVS YRLA+HL+ A  LY GL+WT    L            S+ QL    + + 
Sbjct: 241 SDGSHPRVSHYRLATHLAAAVALYIGLVWTGHGILQRHAFLKSMKSGSTSQLTSMVSSVQ 300

Query: 535 RFK--RLAYMS-KGLIFVTALSGAFVAGLDAGLVYNSFPLMAD-RLIPTDILALEPPL-- 588
           + K  R +  S  GL+ +T LSGAFVAGLDAG++Y +FP M + RL P+     +     
Sbjct: 301 KMKGFRTSVNSFVGLVLITLLSGAFVAGLDAGMIYCTFPEMGEGRLAPSKSELFDQRFCR 360

Query: 589 ---------RNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLK--LPGRANLALTCVT 637
                    RN  +NP+ VQ +HR+L I+ F      +   R  +  LP +   ++  VT
Sbjct: 361 KDDKSDLIWRNMIDNPSLVQLEHRILAITTFVAACGLFIFSRAKRNILPKKIKTSINVVT 420

Query: 638 GMAYMQ 643
           G+   Q
Sbjct: 421 GVVTAQ 426

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q0AIG6|CTAA_NITEC Heme A synthase OS=Nitrosomonas eutropha (strain C91) GN=ctaA PE=3 SV=1

 Score =  166 bits (421), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 14/235 (5%)

Query: 52  TLSENVAKPNILDKPTR---ITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFG 107
           T S N     I DK T+       WLL C  +VF  +V+GGVTRLT SGLS+V WK + G
Sbjct: 3   TNSSNSVPSAISDKYTQNHMPIAIWLLICCALVFAMIVVGGVTRLTGSGLSIVEWKPIVG 62

Query: 108 EKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPA 167
              P    +W      Y++ P+++  NK +TL+EFK I+W EY HR+ GR IG  +FIP 
Sbjct: 63  TIPPIGQEDWEVLLEKYRQIPQYEQVNKGMTLDEFKGIFWWEYFHRLLGRLIGLVYFIPF 122

Query: 168 SIFWYKGYFNSAMK-KRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLAS 226
             F  +   +  +  K +G+F L  A QGLMGWYMV SGL D  +       VSQYRL +
Sbjct: 123 VYFMVRKRIDRLLGLKLLGIFALG-ALQGLMGWYMVMSGLADNVY-------VSQYRLTA 174

Query: 227 HLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
           HL +AF++Y+ + W A   + P +  L+D    + + K+ A+M  GLIFV  LSG
Sbjct: 175 HLGLAFVIYAAMFWVATGLISPLNTHLSDP-VSVHKLKKFAWMLTGLIFVMVLSG 228

Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group.

Nitrosomonas eutropha (strain C91) (taxid: 335283)

EC: 1

EC: .

EC: 3

EC: .

EC: -

EC: .

EC: -

>sp|Q82X64|CTAA_NITEU Heme A synthase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=ctaA PE=3 SV=2

 Score =  162 bits (411), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 158/331 (47%), Gaps = 62/331 (18%)

Query: 313 WLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFGEKLPRNSAEWIEEFNLYKEYPEFK 371
           WLL C  +VF  VV+GGVTRLT SGLS+V WK + G   P +  +W      Y++ P+++
Sbjct: 27  WLLICCALVFAMVVVGGVTRLTGSGLSIVEWKPIVGTIPPISQGDWEILLEKYRQIPQYE 86

Query: 372 LQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSS 431
             N G+         L++                          + G+ W    H     
Sbjct: 87  QINKGMT--------LDE--------------------------FKGIFWWEYFH----- 107

Query: 432 KQLADNRAGLLRFKRLAY----------MSKGLIFVTALSGENMLRGLMGWYMVQSGLED 481
            +L     GL+ F    Y          +   L+ +  L G   L+GLMGWYMV SGL D
Sbjct: 108 -RLLGRLIGLVYFVPFVYFMVRKRVDRVLGTKLLGIFVLGG---LQGLMGWYMVMSGLAD 163

Query: 482 RFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAY 541
             +       VSQYRL +HL +AF++Y+ + W A   L P +   AD  A + +  R A 
Sbjct: 164 NVY-------VSQYRLTAHLGLAFIIYAAMFWVATGLLSPVNTHSADP-ASVRKLGRFAR 215

Query: 542 MSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFD 601
           +  GLIF   LSG  VAG+ AG  YN+FPLM    IP  +  LEP  RNF +N TTVQFD
Sbjct: 216 ILTGLIFFMVLSGGLVAGIHAGKAYNTFPLMDGFFIPPALFVLEPWYRNFFDNITTVQFD 275

Query: 602 HRVLGISVFSLLTAQYWMGRKLKLPGRANLA 632
           HR++   +   +   ++  R+L L     LA
Sbjct: 276 HRMIAWLLMFTIPLFWFKARQLSLSWSGRLA 306

Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group.

Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) (taxid: 228410)

EC: 1

EC: .

EC: 3

EC: .

EC: -

EC: .

EC: -

>sp|Q2W552|CTAA_MAGSA Heme A synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ctaA PE=3 SV=1

 Score =  160 bits (405), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/234 (41%), Positives = 131/234 (55%), Gaps = 12/234 (5%)

Query: 51  TTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFGEK 109
           TT+S +  + ++ +   R    WLL C  MV   V+LGG+TRLT SGLSMV W+ + G  
Sbjct: 2   TTMSRSFGRSDLANGAHRDVAVWLLACCFMVAVMVLLGGLTRLTHSGLSMVEWEPIRGII 61

Query: 110 LPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASI 169
            P N  +W   F  YK+ PE+   N  ++L EFK I+W+EY+HR+WGR IG  F +P   
Sbjct: 62  PPLNDTDWQLFFEKYKQTPEYIKVNAGMSLAEFKGIFWLEYIHRVWGRLIGVVFGLPFLW 121

Query: 170 FWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLS 229
               G    AM  R+    LL A QG MGW+MV+SGL D        P VS YRL +HL+
Sbjct: 122 LALSGRIGRAMVPRLAGVFLLGAAQGGMGWFMVKSGLVDN-------PAVSHYRLTAHLA 174

Query: 230 MAFLLYSGLLWTALDHLLP--SSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
           +AFL++  + W ALD L    S+++ A    G VR   L     GL+ VT L G
Sbjct: 175 LAFLIHGWMFWLALDILADHRSTRRRAHGDVGAVRSWMLGL--TGLVIVTLLFG 226

Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group.

Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) (taxid: 342108)

EC: 1

EC: .

EC: 3

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	643
157132436	426	cytochrome c oxidase assembly protein co	0.491	0.741	0.509	5e-88
170065643	417	cytochrome c oxidase assembly protein CO	0.499	0.769	0.502	1e-87
118794186	435	AGAP001744-PA [Anopheles gambiae str. PE	0.486	0.719	0.520	1e-86
270001402	422	hypothetical protein TcasGA2_TC000219 [T	0.506	0.772	0.478	3e-83
189234938	388	PREDICTED: similar to AGAP001744-PA [Tri	0.506	0.840	0.478	3e-83
322787421	434	hypothetical protein SINV_03850 [Solenop	0.485	0.718	0.489	1e-81
383866249	432	PREDICTED: cytochrome c oxidase assembly	0.381	0.567	0.559	1e-78
110763486	431	PREDICTED: cytochrome c oxidase assembly	0.471	0.703	0.463	2e-78
340725575	431	PREDICTED: cytochrome c oxidase assembly	0.469	0.700	0.470	3e-78
350415193	431	PREDICTED: cytochrome c oxidase assembly	0.469	0.700	0.470	4e-78

>gi|157132436|ref|XP_001662562.1| cytochrome c oxidase assembly protein cox15 [Aedes aegypti] gi|108871185|gb|EAT35410.1| AAEL012426-PA [Aedes aegypti]

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 182/357 (50%), Positives = 232/357 (64%), Gaps = 41/357 (11%)

Query: 291 TTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL 350
           T+L+    KP++ EK  +  GYWLLGCSGMVF AVVLGGVTRLTESGLSMVTWKL GEK+
Sbjct: 61  TSLTRYCTKPDVAEKGRKAVGYWLLGCSGMVFVAVVLGGVTRLTESGLSMVTWKLLGEKM 120

Query: 351 PRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLS 410
           PR+  EW EEF  Y++YPEFK++N                     D+  +S++++     
Sbjct: 121 PRSQQEWQEEFERYQQYPEFKIKN--------------------KDI-TLSEFKM----- 154

Query: 411 MAFLLYSGLLWTALD---HLLPSSKQLADNRAGLLRFKRLAYMSKGL-IFVTALSGENML 466
           + F+ Y   +W  L    + +P++            F    Y+ +G+ I   A       
Sbjct: 155 IWFMEYGHRMWGRLIGAFYAIPAAY-----------FWSRGYLDRGMKIRTVAFGALIAA 203

Query: 467 RGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQL 526
           +GLMGWYMV+SGLEDRFH +SDVPRVSQYRLASHL  AF+LYS  LW+ALD LLP+ K L
Sbjct: 204 QGLMGWYMVKSGLEDRFHQESDVPRVSQYRLASHLGFAFVLYSLFLWSALDKLLPAQKLL 263

Query: 527 ADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEP 586
               A   +FK LA+ +K  +F+TA+SGA VAGLDAGLVYNSFP MADR IP+DILA+ P
Sbjct: 264 GKIPAATFKFKGLAHATKAAVFITAMSGALVAGLDAGLVYNSFPKMADRWIPSDILAMSP 323

Query: 587 PLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
            LRNFTENPTTVQFDHR+LG +  +L+T  + + R+  LP RA  A T V  M ++Q
Sbjct: 324 TLRNFTENPTTVQFDHRLLGTATLTLITGMFMLSRRRVLPPRAYKAATAVAAMGWLQ 380

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170065643|ref|XP_001868025.1| cytochrome c oxidase assembly protein COX15 [Culex quinquefasciatus] gi|167862567|gb|EDS25950.1| cytochrome c oxidase assembly protein COX15 [Culex quinquefasciatus]

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/362 (50%), Positives = 235/362 (64%), Gaps = 41/362 (11%)

Query: 286 SSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKL 345
           ++ + T L+    KP+ +EK  +  GYWLLGCSGMVF AVVLGGVTRLTESGLSMVTWKL
Sbjct: 47  TNALRTALTRYCTKPDPVEKGRKAVGYWLLGCSGMVFVAVVLGGVTRLTESGLSMVTWKL 106

Query: 346 FGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRL 405
            GE++PR   EW +EF  Y+++PEFK++N                     D+  +S++++
Sbjct: 107 LGEQMPRTQQEWQDEFERYQQFPEFKIKN--------------------KDI-TLSEFKM 145

Query: 406 ASHLSMAFLLYSGLLWTALD---HLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSG 462
                + F+ Y   +W  L    + LP++            F    Y  +G+   T + G
Sbjct: 146 -----IWFMEYGHRMWGRLIGAFYALPAAY-----------FWSRGYFDRGMKIRTLVFG 189

Query: 463 ENM-LRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLP 521
             +  +GLMGWYMV+SGLEDRFH +SDVPRVSQYRLASHL  AF+LYS  LW+ALD LLP
Sbjct: 190 ALIGCQGLMGWYMVKSGLEDRFHQESDVPRVSQYRLASHLGFAFVLYSLFLWSALDKLLP 249

Query: 522 SSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDI 581
           + K L    A  L+FK LA+ +K  +F+TA+SGAFVAGLDAGL+YNSFP MADR IP+DI
Sbjct: 250 AQKLLGQIPAATLKFKGLAHATKAAVFITAMSGAFVAGLDAGLIYNSFPKMADRWIPSDI 309

Query: 582 LALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAY 641
           LAL P LRNFTENPTTVQFDHRVLG +  +L+T  + + R+  LP RA  A   V  + +
Sbjct: 310 LALSPTLRNFTENPTTVQFDHRVLGTATLTLITGMFVLSRRRMLPPRAYTAAAAVATVGW 369

Query: 642 MQ 643
           MQ
Sbjct: 370 MQ 371

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118794186|ref|XP_321341.3| AGAP001744-PA [Anopheles gambiae str. PEST] gi|116116172|gb|EAA00923.3| AGAP001744-PA [Anopheles gambiae str. PEST]

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/361 (52%), Positives = 230/361 (63%), Gaps = 48/361 (13%)

Query: 291 TTLSENVAKPNI-LEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEK 349
           T +S    KP++  E+ ++  GYWLLGCSGMVF AV+LGGVTRLTESGLSMVTWKL GE+
Sbjct: 69  TPVSRYCTKPSVPQERGSKAVGYWLLGCSGMVFVAVILGGVTRLTESGLSMVTWKLLGEQ 128

Query: 350 LPRNSAEWIEEFNLYKEYPEFKLQNIGL------MGWYMVQSGLEDRFHTQSDVPRVSQY 403
           +PR  AEW EEF+ Y+++PEFKL+N  +      + WYM                    +
Sbjct: 129 MPRTDAEWQEEFDRYQQFPEFKLKNQDITMQEFKLIWYMEYG-----------------H 171

Query: 404 RLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGL-IFVTALSG 462
           R+      AF  YS          +P+           L F    Y +K + I V A   
Sbjct: 172 RMWGRAIGAF--YS----------IPA-----------LYFWTKGYFNKAMKIRVLAFGA 208

Query: 463 ENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPS 522
               +GLMGWYMV+SGLEDRFH +SDVPRVSQYRLASHL  AF+LYS  LW+ALD LLP+
Sbjct: 209 LIGAQGLMGWYMVKSGLEDRFHEESDVPRVSQYRLASHLGFAFVLYSLFLWSALDKLLPA 268

Query: 523 SKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDIL 582
            K +    A   RFK LA+ +K  +F+TALSGAFVAGLDAGL+YNSFP MADR IP+DIL
Sbjct: 269 QKLVGQIPAATFRFKGLAHATKAAVFLTALSGAFVAGLDAGLIYNSFPKMADRWIPSDIL 328

Query: 583 ALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYM 642
           AL P LRNFTENPTTVQFDHRVLG +  +L+T  + + R+  LP RA  A T V  M +M
Sbjct: 329 ALSPALRNFTENPTTVQFDHRVLGTATLTLITGMFLLSRRRLLPPRAYKAATAVAAMGWM 388

Query: 643 Q 643
           Q
Sbjct: 389 Q 389

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001402|gb|EEZ97849.1| hypothetical protein TcasGA2_TC000219 [Tribolium castaneum]

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 179/374 (47%), Positives = 228/374 (60%), Gaps = 48/374 (12%)

Query: 285 WSSQVATTL--SENVAKP----------NILEKPTRITGYWLLGCSGMVFGAVVLGGVTR 332
           W  Q  T L  + N  KP          NI +K  +  GYWL+ CSGMVF AVVLGGVTR
Sbjct: 39  WRRQPLTNLLKTRNFLKPSGAIIVRLNSNIPQKSKKSIGYWLMTCSGMVFVAVVLGGVTR 98

Query: 333 LTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFH 392
           LTESGLSMVTWKL GEK+PR   EW EEF  YK++PEFK++N  +               
Sbjct: 99  LTESGLSMVTWKLLGEKMPRTEKEWQEEFEKYKQFPEFKIKNREMT-------------- 144

Query: 393 TQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSK 452
                  +S+++   H+     ++   +      L+P+    A  R      KR+     
Sbjct: 145 -------LSEFKWIWHMEFGHRMWGRAIGAVF--LIPAVYFWARGRFTPAMKKRV----- 190

Query: 453 GLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLL 512
            L F T +  +    GLMGWYMV+SGLEDRFH +SDVPRVSQYRLA+HLS+AF+LY+  L
Sbjct: 191 -LAFGTLIGAQ----GLMGWYMVKSGLEDRFHGESDVPRVSQYRLAAHLSLAFVLYTLFL 245

Query: 513 WTALDHLLPSSKQLADNRAGL---LRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSF 569
           W+ LD LLP+       +  +    +F+ +A+  KGL+F+TALSGAFVAGLDAGLVYNSF
Sbjct: 246 WSGLDQLLPAETITTGCKNAIKAARKFRMVAHTCKGLVFLTALSGAFVAGLDAGLVYNSF 305

Query: 570 PLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRA 629
           P MAD+ IP DILAL P + NFTENPTTVQFDHRVLG +  +++TA Y M R+  LP RA
Sbjct: 306 PKMADKWIPDDILALMPAMSNFTENPTTVQFDHRVLGTTTLTVITAMYLMSRRRLLPRRA 365

Query: 630 NLALTCVTGMAYMQ 643
             A      +A++Q
Sbjct: 366 YTAAAVFGALAWLQ 379

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234938|ref|XP_971726.2| PREDICTED: similar to AGAP001744-PA [Tribolium castaneum]

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 179/374 (47%), Positives = 228/374 (60%), Gaps = 48/374 (12%)

Query: 285 WSSQVATTL--SENVAKP----------NILEKPTRITGYWLLGCSGMVFGAVVLGGVTR 332
           W  Q  T L  + N  KP          NI +K  +  GYWL+ CSGMVF AVVLGGVTR
Sbjct: 5   WRRQPLTNLLKTRNFLKPSGAIIVRLNSNIPQKSKKSIGYWLMTCSGMVFVAVVLGGVTR 64

Query: 333 LTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFH 392
           LTESGLSMVTWKL GEK+PR   EW EEF  YK++PEFK++N  +               
Sbjct: 65  LTESGLSMVTWKLLGEKMPRTEKEWQEEFEKYKQFPEFKIKNREMT-------------- 110

Query: 393 TQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSK 452
                  +S+++   H+     ++   +      L+P+    A  R      KR+     
Sbjct: 111 -------LSEFKWIWHMEFGHRMWGRAIGAVF--LIPAVYFWARGRFTPAMKKRV----- 156

Query: 453 GLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLL 512
            L F T +  +    GLMGWYMV+SGLEDRFH +SDVPRVSQYRLA+HLS+AF+LY+  L
Sbjct: 157 -LAFGTLIGAQ----GLMGWYMVKSGLEDRFHGESDVPRVSQYRLAAHLSLAFVLYTLFL 211

Query: 513 WTALDHLLPSSKQLADNRAGL---LRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSF 569
           W+ LD LLP+       +  +    +F+ +A+  KGL+F+TALSGAFVAGLDAGLVYNSF
Sbjct: 212 WSGLDQLLPAETITTGCKNAIKAARKFRMVAHTCKGLVFLTALSGAFVAGLDAGLVYNSF 271

Query: 570 PLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRA 629
           P MAD+ IP DILAL P + NFTENPTTVQFDHRVLG +  +++TA Y M R+  LP RA
Sbjct: 272 PKMADKWIPDDILALMPAMSNFTENPTTVQFDHRVLGTTTLTVITAMYLMSRRRLLPRRA 331

Query: 630 NLALTCVTGMAYMQ 643
             A      +A++Q
Sbjct: 332 YTAAAVFGALAWLQ 345

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787421|gb|EFZ13509.1| hypothetical protein SINV_03850 [Solenopsis invicta]

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 178/364 (48%), Positives = 225/364 (61%), Gaps = 52/364 (14%)

Query: 296 NVAKPNILEKPT----RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLP 351
           NV   N   KP+    +I G WLL C GMVF AV LGG+TRLTESGLSMVTWKL GEK+P
Sbjct: 61  NVVTRNYASKPSGKHDKIVGSWLLTCGGMVFVAVALGGITRLTESGLSMVTWKLLGEKMP 120

Query: 352 RNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHT--QSDVPRVSQYRLASHL 409
            N A+W+ EF  YK++PE+K+ N  +         LE+  H      + R+        +
Sbjct: 121 LNEAQWLSEFERYKQFPEYKITNYNMT--------LEEFKHIWWMEYLHRM----WGRLI 168

Query: 410 SMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGL 469
             AF++ +   W                  G+L+      M   ++ + +L G   L+GL
Sbjct: 169 GAAFVIPATYFW----------------YKGMLK----PGMKTRVVVLGSLIG---LQGL 205

Query: 470 MGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADN 529
           MGWYMV+SGLEDRF   SDVPRVSQYRLA+HL +A LLY+G L+ ALDHL+P+ K L  N
Sbjct: 206 MGWYMVKSGLEDRFIEPSDVPRVSQYRLATHLGLALLLYTGFLYNALDHLIPAQK-LTVN 264

Query: 530 RAG----------LLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPT 579
            +G          L RFK L Y +KGL+FVTALSGAFVAG+DAGL+YN+FP MAD+ IP 
Sbjct: 265 VSGTVIASNALKALKRFKGLIYSTKGLVFVTALSGAFVAGMDAGLIYNTFPKMADKWIPD 324

Query: 580 DILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGM 639
           DIL + P LRNFTENPTTVQFDHR+LGI+  +L+T    + RK KLPGR   A+  V   
Sbjct: 325 DILGISPVLRNFTENPTTVQFDHRILGITTIALITCLGVLSRKHKLPGRGRKAVAAVLCA 384

Query: 640 AYMQ 643
            Y+Q
Sbjct: 385 GYLQ 388

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866249|ref|XP_003708583.1| PREDICTED: cytochrome c oxidase assembly protein COX15 homolog [Megachile rotundata]

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 145/259 (55%), Positives = 185/259 (71%), Gaps = 14/259 (5%)

Query: 31  KKNSLGFFSPGLTRWSSQVATTLSENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGV 90
           K+NS+ +   GL++ ++  A   +   +      K  +I G W+L C GMVF AV+LGGV
Sbjct: 45  KRNSI-YLYKGLSKQTNIRALNFATKSS-----PKSDKIVGKWMLTCGGMVFIAVILGGV 98

Query: 91  TRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEY 150
           TRLTESGLSMVTWKL GEK+P   ++W+ EF  YK++PE+K+ N+++TLE+FKRIWWMEY
Sbjct: 99  TRLTESGLSMVTWKLLGEKMPVTESQWLAEFERYKQFPEYKITNQNMTLEQFKRIWWMEY 158

Query: 151 LHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRF 210
           LHRMWGR IGA F IPA+ FWY+G     MK RV V G LI  QGLMGWYMV+SGLEDRF
Sbjct: 159 LHRMWGRLIGAVFIIPATYFWYRGMLKPGMKTRVAVLGTLIGLQGLMGWYMVKSGLEDRF 218

Query: 211 HIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSK--------QLADNRAGLVR 262
              SDVPRVSQYRLA+HL MAF++Y+G L+ ALDHL+P+ K         ++D    L R
Sbjct: 219 VGPSDVPRVSQYRLAAHLGMAFIIYTGFLYNALDHLIPAEKLNLSNLNVNISDVTRKLNR 278

Query: 263 FKRLAYMSKGLIFVTALSG 281
           F+ L + +KGL+F TALSG
Sbjct: 279 FRMLVHSTKGLVFFTALSG 297

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110763486|ref|XP_394095.3| PREDICTED: cytochrome c oxidase assembly protein COX15 homolog [Apis mellifera]

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 163/352 (46%), Positives = 215/352 (61%), Gaps = 49/352 (13%)

Query: 304 EKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNL 363
           +K  ++ G WLL CSGM+F AV+LGGVTRLTESGLSMVTWKL GEK+P   ++W  EF  
Sbjct: 71  QKSDKVLGKWLLSCSGMIFVAVILGGVTRLTESGLSMVTWKLLGEKMPITESQWHAEFER 130

Query: 364 YKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRV----SQYRLASHLSMAFLLYSGL 419
           YK++PE+K+ N  +               T  +  R+      +R+   L  A  +    
Sbjct: 131 YKQFPEYKINNQNM---------------TLEEFKRIWWMEYLHRMWGRLIGAVFIVPAT 175

Query: 420 LWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGL 479
            + A   L PS K                      I +T L     L+GLMGWYMV+SGL
Sbjct: 176 YFWAKGMLKPSMK----------------------IRITILGSLIGLQGLMGWYMVKSGL 213

Query: 480 EDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSK--------QLADNRA 531
           EDRF   SDVPRVSQYRLA+HL +AFLLY+G L+ AL++L+P+ K         ++D ++
Sbjct: 214 EDRFVEPSDVPRVSQYRLAAHLGIAFLLYTGFLYNALNYLVPAQKLTLNNSNVNISDLKS 273

Query: 532 GLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNF 591
            L +F+ L +++KGL+F TALSGAFVAG+DAGL+YN+FP MA++ IP DI A+ P  +NF
Sbjct: 274 KLKKFRILVHLTKGLVFFTALSGAFVAGMDAGLIYNTFPKMANKWIPDDIFAISPTWKNF 333

Query: 592 TENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           TENPTT+QFDHR+LGI+  SL+T      RK KLPG A  A   V    Y+Q
Sbjct: 334 TENPTTIQFDHRILGITTLSLITYIAIASRKYKLPGNAKKAAIAVLCAGYLQ 385

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725575|ref|XP_003401144.1| PREDICTED: cytochrome c oxidase assembly protein COX15 homolog [Bombus terrestris]

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 214/353 (60%), Gaps = 51/353 (14%)

Query: 304 EKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNL 363
           EK  +  G WLL CSGMVF AVVLGG+TRLTESGLSMVTWKL GEK+P    +W  EF  
Sbjct: 71  EKSNKTVGKWLLTCSGMVFVAVVLGGITRLTESGLSMVTWKLLGEKMPTTEIQWHAEFER 130

Query: 364 YKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRV----SQYRLASHLSMA-FLLYSG 418
           YK++PE+++ N  +               T  +  R+      +R+   L  A F++ + 
Sbjct: 131 YKQFPEYRINNQNM---------------TLEEFKRIWWMEYLHRMWGRLIGAVFIVPAT 175

Query: 419 LLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSG 478
             WT    L P  K                      I V  L     L+GLMGWYMV+SG
Sbjct: 176 YFWTK-GMLTPGMK----------------------IRVAVLGSLIGLQGLMGWYMVKSG 212

Query: 479 LEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSK--------QLADNR 530
           LEDRF   SDVPRVSQYRLA+HL MAF++Y+G L+ ALD+L+P+ K         +++ +
Sbjct: 213 LEDRFVEPSDVPRVSQYRLAAHLGMAFIIYTGFLYNALDYLVPAQKLNLDHSNVDISNLK 272

Query: 531 AGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRN 590
           + L RF+ L + +KGL+F TALSGAFVAG+DAGL+YN+FP MA++ IP D+  L P L+N
Sbjct: 273 SKLKRFRMLVHSTKGLVFFTALSGAFVAGMDAGLIYNTFPKMANKWIPDDVFTLSPLLKN 332

Query: 591 FTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           FTENPTTVQFDHR+LGI+  SL+T      RK KLPG A  A+  V    Y+Q
Sbjct: 333 FTENPTTVQFDHRILGITTLSLITYIAIASRKYKLPGNAKKAIVAVLCAGYLQ 385

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415193|ref|XP_003490559.1| PREDICTED: cytochrome c oxidase assembly protein COX15 homolog [Bombus impatiens]

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 214/353 (60%), Gaps = 51/353 (14%)

Query: 304 EKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNL 363
           EK  +  G WLL CSGMVF AVVLGG+TRLTESGLSMVTWKL GEK+P    +W  EF  
Sbjct: 71  EKSNKTVGKWLLTCSGMVFVAVVLGGITRLTESGLSMVTWKLLGEKMPTTEIQWHAEFER 130

Query: 364 YKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRV----SQYRLASHLSMA-FLLYSG 418
           YK++PE+K+ N  +               T  +  R+      +R+   L  A F++ + 
Sbjct: 131 YKQFPEYKINNQNM---------------TLEEFKRIWWMEYLHRMWGRLIGAVFIIPAT 175

Query: 419 LLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSG 478
             WT    L P  K                      I V  L     L+GLMGWYMV+SG
Sbjct: 176 YFWTK-GMLTPGMK----------------------IRVAVLGSLIGLQGLMGWYMVKSG 212

Query: 479 LEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSK--------QLADNR 530
           LEDRF   SDVPRVSQYRLA+HL MAF++Y+G L+ AL++L+P+ K         +++ +
Sbjct: 213 LEDRFVEPSDVPRVSQYRLAAHLGMAFIIYTGFLYNALNYLVPAQKLNLDHSNVDISNLK 272

Query: 531 AGLLRFKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRN 590
           + L RF+ L + +KGL+F TALSGAFVAG+DAGL+YN+FP MA++ IP D+  L P L+N
Sbjct: 273 SKLKRFRMLVHSTKGLVFFTALSGAFVAGMDAGLIYNTFPKMANKWIPDDVFTLSPLLKN 332

Query: 591 FTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
           FTENPTTVQFDHR+LGI+  SL+T      RK KLPG A  A+  V    Y+Q
Sbjct: 333 FTENPTTVQFDHRILGITTLSLITYIAIASRKYKLPGNAKKAIVAVLCAGYLQ 385

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	643
FB|FBgn0034938	393	CG3803 [Drosophila melanogaste	0.391	0.641	0.535	5.1e-67
ZFIN|ZDB-GENE-040426-955	399	cox15 "COX15 homolog, cytochro	0.326	0.526	0.578	1e-61
UNIPROTKB|Q08DG6	413	COX15 "Cytochrome c oxidase as	0.328	0.510	0.558	2.2e-59
UNIPROTKB|F1NMU0	356	COX15 "Uncharacterized protein	0.323	0.584	0.566	5.1e-58
UNIPROTKB|Q7KZN9	410	COX15 "Cytochrome c oxidase as	0.368	0.578	0.512	1.5e-58
UNIPROTKB|E2RJ76	413	COX15 "Uncharacterized protein	0.328	0.510	0.558	5.1e-58
UNIPROTKB|F1S8W1	415	COX15 "Uncharacterized protein	0.328	0.508	0.558	5.7e-59
RGD|1312043	414	Cox15 "cytochrome c oxidase as	0.328	0.509	0.562	2.6e-61
MGI|MGI:1920112	413	Cox15 "cytochrome c oxidase as	0.328	0.510	0.562	8.8e-61
SGD|S000000943	486	COX15 "Protein required for th	0.353	0.467	0.459	1.1e-60

FB|FBgn0034938 CG3803 [Drosophila melanogaster (taxid:7227)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 136/254 (53%), Positives = 173/254 (68%)

Query:    29 QSKKNSLGFFSPGLTRWSSQVATTLSE-NVAKPNILDKPTRITGYWLLGCSGMVFGAVVL 87
             Q + N +    PG     +   T + E  V KP    K  +  G W LG SGMVF AV L
Sbjct:     6 QKRTNLIKLVVPGPRLHQTIAQTAIKEIPVIKPISTPKSDKTVGRWFLGVSGMVFVAVGL 65

Query:    88 GGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWW 147
             GGVTRLTESGLSMVTWKL GE++PR   EW++EFNLY++YPE+KLKN ++T+EEFK I+ 
Sbjct:    66 GGVTRLTESGLSMVTWKLTGERMPRTQEEWVQEFNLYQQYPEYKLKNVNMTVEEFKFIFM 125

Query:   148 MEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLE 207
             MEY+HRMWGR IG  F +PA  FW KGYF +  KK V + G LI  QGLMGWYMV+SGLE
Sbjct:   126 MEYMHRMWGRAIGGFFLLPAVYFWRKGYFCAKTKKSVLLLGTLIGLQGLMGWYMVKSGLE 185

Query:   208 DRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLA 267
             DRF   +DVPRVSQYRLASHL+ AF+LYS  L  A+  L+P++  +   +      K L 
Sbjct:   186 DRFQDPNDVPRVSQYRLASHLAAAFVLYSLSLSKAMSLLIPTNTFVIQAKKAF-NIKGLT 244

Query:   268 YMSKGLIFVTALSG 281
             +++K ++ +TA+SG
Sbjct:   245 HLTKAMVLLTAISG 258

GO:0008535 "respiratory chain complex IV assembly" evidence=ISS

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0006784 "heme a biosynthetic process" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-040426-955 cox15 "COX15 homolog, cytochrome c oxidase assembly protein (yeast)" [Danio rerio (taxid:7955)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 125/216 (57%), Positives = 163/216 (75%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R+ G WLLGCSG+V GAVVLGGVTRLTESGLSMV W L  E K P+  AEW +EF  Y++
Sbjct:    56 RLIGRWLLGCSGLVLGAVVLGGVTRLTESGLSMVDWHLVKEMKPPQTQAEWEQEFAKYQQ 115

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRV-G 185
             +PEFK+ N D+TL EFK I++ME+ HRMWGR +G A+ +PA+ FW +GYF+ +MK RV G
Sbjct:   116 FPEFKIMNHDMTLTEFKFIFYMEWGHRMWGRLVGLAYILPAAYFWRRGYFSRSMKTRVLG 175

Query:   186 VFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDH 245
             + G ++  QGL+GWYMV+SGLE++     DVPRVSQYRLA+HL  A LLY+  LWT L  
Sbjct:   176 LCGFVVF-QGLLGWYMVKSGLEEKPE-SYDVPRVSQYRLAAHLGSALLLYAASLWTGLTL 233

Query:   246 LLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             LLP+++ + D+R  L+  +R A M+ GL+F+TALSG
Sbjct:   234 LLPANR-MPDSRQ-LLNLRRFAKMTGGLVFLTALSG 267

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0006784 "heme a biosynthetic process" evidence=IEA

UNIPROTKB|Q08DG6 COX15 "Cytochrome c oxidase assembly protein COX15 homolog" [Bos taurus (taxid:9913)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 120/215 (55%), Positives = 151/215 (70%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R+ G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct:    70 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSKEEWEAEFQKYQQ 129

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGV 186
             +PEFK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA+ FW KG+    +K RV  
Sbjct:   130 FPEFKILNHDMTLAEFKFIWYMEYSHRMWGRLVGLAYILPAAYFWKKGWLTRGLKGRVLA 189

Query:   187 FGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL 246
                L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY   LWT+L  L
Sbjct:   190 LCGLVCFQGLLGWYMVKSGLEEKPD-SHDIPRVSQYRLAAHLGSALVLYCASLWTSLSLL 248

Query:   247 LPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             LP  K L + R  L+R +R A+ + GL+F+TALSG
Sbjct:   249 LPQHK-LTETRQ-LLRLRRFAHGTAGLVFLTALSG 281

GO:0008535 "respiratory chain complex IV assembly" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004129 "cytochrome-c oxidase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0006784 "heme a biosynthetic process" evidence=IEA

UNIPROTKB|F1NMU0 COX15 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 120/212 (56%), Positives = 148/212 (69%)

Query:    71 GYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPE 129
             G WLL CSG V GAVVLGGVTRLTESGLSMV W L  E K PR   EW  EF  Y+++PE
Sbjct:    16 GRWLLACSGAVAGAVVLGGVTRLTESGLSMVDWHLVKEMKPPRTQQEWEAEFQKYQQFPE 75

Query:   130 FKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGL 189
             FK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA+ FW KG+ +  MK RV     
Sbjct:    76 FKILNHDMTLTEFKFIWYMEYSHRMWGRVVGLAYILPAAYFWRKGWLSRPMKGRVLALCG 135

Query:   190 LIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPS 249
             L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY+  LWT L  LLP 
Sbjct:   136 LVCFQGLLGWYMVKSGLEEKPD-SHDIPRVSQYRLAAHLGSALVLYAASLWTGLSLLLPR 194

Query:   250 SKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
               QL + R  L++ +  A+ +  LIF+TALSG
Sbjct:   195 H-QLHETRQ-LLQLRHFAHGTTALIFLTALSG 224

GO:0006784 "heme a biosynthetic process" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0004129 "cytochrome-c oxidase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0008535 "respiratory chain complex IV assembly" evidence=IEA

UNIPROTKB|Q7KZN9 COX15 "Cytochrome c oxidase assembly protein COX15 homolog" [Homo sapiens (taxid:9606)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 125/244 (51%), Positives = 160/244 (65%)

Query:    40 PGLTRWSSQVATTLSEN-VAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGL 98
             PG     S+VA       V+ P+      R+ G WLL CSG V GAV+LGGVTRLTESGL
Sbjct:    40 PGQYSTISEVALQSGRGTVSLPS--KAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97

Query:    99 SMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGR 157
             SMV W L  E K P +  EW  EF  Y+++PEFK+ N D+TL EFK IW+MEY HRMWGR
Sbjct:    98 SMVDWHLIKEMKPPTSQEEWEAEFQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGR 157

Query:   158 CIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVP 217
              +G  + +PA+ FW KG+ +  MK RV     L+  QGL+GWYMV+SGLE++     D+P
Sbjct:   158 LVGLVYILPAAYFWRKGWLSRGMKGRVLALCGLVCFQGLLGWYMVKSGLEEKSD-SHDIP 216

Query:   218 RVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVT 277
             RVSQYRLA+HL  A +LY   LWT+L  LLP  K L +    L++ +R A+ + GL+F+T
Sbjct:   217 RVSQYRLAAHLGSALVLYCASLWTSLSLLLPPHK-LPETHQ-LLQLRRFAHGTAGLVFLT 274

Query:   278 ALSG 281
             ALSG
Sbjct:   275 ALSG 278

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006784 "heme a biosynthetic process" evidence=IEA;IGI

GO:0005746 "mitochondrial respiratory chain" evidence=TAS

GO:0004129 "cytochrome-c oxidase activity" evidence=IGI;TAS

GO:0055114 "oxidation-reduction process" evidence=TAS

GO:0007585 "respiratory gaseous exchange" evidence=TAS

GO:0045333 "cellular respiration" evidence=IC

GO:0006123 "mitochondrial electron transport, cytochrome c to oxygen" evidence=IC

GO:0008535 "respiratory chain complex IV assembly" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E2RJ76 COX15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 120/215 (55%), Positives = 150/215 (69%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R+ G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct:    70 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWETEFQKYQQ 129

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGV 186
             +PEFK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA  FW KG+ +  MK RV  
Sbjct:   130 FPEFKILNHDMTLAEFKFIWYMEYSHRMWGRLVGLAYILPAVYFWRKGWLSRGMKGRVLA 189

Query:   187 FGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL 246
                L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY   LWTAL  L
Sbjct:   190 LCGLVCFQGLLGWYMVKSGLEEKPD-SHDIPRVSQYRLAAHLGSALVLYCASLWTALSLL 248

Query:   247 LPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             L S  +L + R  L+  +R A+ + GL+F+TALSG
Sbjct:   249 L-SQHKLPETRQ-LLWLRRCAHGTAGLVFLTALSG 281

GO:0008535 "respiratory chain complex IV assembly" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004129 "cytochrome-c oxidase activity" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0006784 "heme a biosynthetic process" evidence=IEA

UNIPROTKB|F1S8W1 COX15 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 120/215 (55%), Positives = 151/215 (70%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R+ G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct:    70 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQKYQQ 129

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGV 186
             +PEFK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA+ FW KG+ N  +K RV  
Sbjct:   130 FPEFKILNHDMTLPEFKFIWYMEYSHRMWGRLVGLAYILPAAYFWRKGWLNRGLKGRVLA 189

Query:   187 FGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL 246
                L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY   LWT+L  L
Sbjct:   190 LCGLVCFQGLLGWYMVKSGLEEKPD-SHDIPRVSQYRLAAHLGSALVLYCASLWTSLSLL 248

Query:   247 LPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             LP  K L + R  L+  +R A+ + GL+F+TALSG
Sbjct:   249 LPQHK-LPETRQ-LLWLRRCAHGTAGLVFLTALSG 281

GO:0008535 "respiratory chain complex IV assembly" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004129 "cytochrome-c oxidase activity" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0006784 "heme a biosynthetic process" evidence=IEA

RGD|1312043 Cox15 "cytochrome c oxidase assembly homolog 15 (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 606 (218.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 121/215 (56%), Positives = 150/215 (69%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R  G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct:    71 RAVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQKYQQ 130

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGV 186
             +PEFK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA+ FW KG+ N  MK RV  
Sbjct:   131 FPEFKILNHDMTLAEFKFIWYMEYSHRMWGRAVGLAYILPAAYFWRKGWLNRGMKGRVLA 190

Query:   187 FGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL 246
                L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY G LWT+L  L
Sbjct:   191 LCGLVCFQGLLGWYMVKSGLEEKPE-SYDIPRVSQYRLAAHLGSALILYCGSLWTSLSLL 249

Query:   247 LPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             LP  K + + R  L+  +R A  + GL+F+TALSG
Sbjct:   250 LPQHK-IPETRQ-LLWLRRFAGGTAGLVFLTALSG 282

GO:0003674 "molecular_function" evidence=ND

GO:0004129 "cytochrome-c oxidase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0006784 "heme a biosynthetic process" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0008535 "respiratory chain complex IV assembly" evidence=IEA;ISO

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

MGI|MGI:1920112 Cox15 "cytochrome c oxidase assembly protein 15" [Mus musculus (taxid:10090)]

 Score = 601 (216.6 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
 Identities = 121/215 (56%), Positives = 149/215 (69%)

Query:    68 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKE 126
             R  G WLL CSG V GAV+LGGVTRLTESGLSMV W L  E K P +  EW  EF  Y++
Sbjct:    70 RAVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQKYQQ 129

Query:   127 YPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGV 186
             +PEFK+ N D+TL EFK IW+MEY HRMWGR +G A+ +PA+ FW KG+ N  MK RV  
Sbjct:   130 FPEFKILNHDMTLAEFKFIWYMEYSHRMWGRAVGLAYILPAAYFWRKGWLNRGMKGRVLA 189

Query:   187 FGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL 246
                L+  QGL+GWYMV+SGLE++     D+PRVSQYRLA+HL  A +LY   LWT+L  L
Sbjct:   190 LCGLVCFQGLLGWYMVKSGLEEKPE-SYDIPRVSQYRLAAHLGSALVLYCASLWTSLSLL 248

Query:   247 LPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
             LP  K L + R  L+  +R A  + GL+F+TALSG
Sbjct:   249 LPQHK-LPETRQ-LLWLRRFAGGTAGLVFLTALSG 281

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0006784 "heme a biosynthetic process" evidence=ISO

GO:0008535 "respiratory chain complex IV assembly" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

SGD|S000000943 COX15 "Protein required for the hydroxylation of heme O to form heme A" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 487 (176.5 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
 Identities = 109/237 (45%), Positives = 146/237 (61%)

Query:    65 KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWK-LFGEKLPRNSAEWIEEFNL 123
             K ++   YWL+G SG+VFG VVLGG+TRLTESGLS+  WK + G   P N  EW EEF  
Sbjct:    81 KTSKNVAYWLIGTSGLVFGIVVLGGLTRLTESGLSITEWKPVTGTLPPMNQKEWEEEFIK 140

Query:   124 YKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKR 183
             YKE PEFKL N  I L+EFK I++ME++HR+WGR IGA F +PA  F      +  + KR
Sbjct:   141 YKESPEFKLLNSHIDLDEFKFIFFMEWIHRLWGRAIGAVFILPAVYFAVSKKTSGHVNKR 200

Query:   184 V-GVFGLLIACQGLMGWYMVQSGLE-DRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWT 241
             + G+ GLL   QG +GW+MV+SGL+ ++   +   P VSQYRL +HL  AF LY G+LWT
Sbjct:   201 LFGLAGLL-GLQGFVGWWMVKSGLDQEQLDARKSKPTVSQYRLTTHLGTAFFLYMGMLWT 259

Query:   242 ALDHLLPSSKQLADNRAGLVRFKRL-----AYMSKGLIFVTALSGLTRWSSQVATTL 293
              L+ +L   K + +    +  FK+L       M K  + + A+S LT  S  +   L
Sbjct:   260 GLE-ILRECKWIKNPVQAISLFKKLDNPAIGPMRKISLALLAVSFLTAMSGGMVAGL 315

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006784 "heme a biosynthetic process" evidence=IEA;IGI;IMP

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016653 "oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor" evidence=IGI;IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	643
PTZ00127	403	PTZ00127, PTZ00127, cytochrome c oxidase assembly	6e-89
PTZ00127	403	PTZ00127, PTZ00127, cytochrome c oxidase assembly	9e-86
pfam02628	301	pfam02628, COX15-CtaA, Cytochrome oxidase assembly	3e-48
pfam02628	301	pfam02628, COX15-CtaA, Cytochrome oxidase assembly	2e-46
COG1612	323	COG1612, CtaA, Uncharacterized protein required fo	6e-26
COG1612	323	COG1612, CtaA, Uncharacterized protein required fo	6e-25

>gnl|CDD|240283 PTZ00127, PTZ00127, cytochrome c oxidase assembly protein; Provisional

 Score =  281 bits (722), Expect = 6e-89
 Identities = 135/393 (34%), Positives = 184/393 (46%), Gaps = 60/393 (15%)

Query: 262 RFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSGMV 321
           R K L        F      L   S       S + +   +     +  G+WLLGC+G+V
Sbjct: 20  RLKPLLAQRSRKFFTATKFKLAEESRVAE---STDASTQWVAPGGEKKVGHWLLGCAGLV 76

Query: 322 FGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKL--------- 372
            G VVLGG TRLTESGLSM  WK  G K P    EW +EF+ YK++PE+K          
Sbjct: 77  GGMVVLGGYTRLTESGLSMTDWKFIGVKPPITQEEWEKEFDKYKQFPEYKQVHYGMTLEE 136

Query: 373 -QNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSS 431
            + I    W           H      R+    L   + + F L                
Sbjct: 137 FKKIFFWEWL----------H------RM----LGRSIGLFFGL---------------- 160

Query: 432 KQLADNRAGLLRFKRLAYMSKGLIF-VTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVP 490
                    LL F    Y+   ++  ++A+ G    +G +GW+MV+SGL D   T++  P
Sbjct: 161 --------PLLYFAAKGYLKPRMLKRLSAIGGLGGAQGFVGWWMVKSGL-DEPLTENKKP 211

Query: 491 RVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVT 550
           RVS YRLA+HL  AF++YS LLW  L  +L +   +A     LL+ + LA     L+F+T
Sbjct: 212 RVSPYRLAAHLFNAFVIYSLLLWNGLTLILFALPSIAPF-PELLKMRLLARGLFALVFLT 270

Query: 551 ALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVF 610
           A+SGAFVAG DAGL YN++P M  + +P D+    P  +NF EN   VQF+HRVL    F
Sbjct: 271 AMSGAFVAGNDAGLAYNTWPKMGGKFVPDDVHNFVPWYKNFFENTAVVQFNHRVLAYLTF 330

Query: 611 SLLTAQYWMGRKLKLPGRANLALTCVTGMAYMQ 643
                 Y+  RKL LP      L  + G   +Q
Sbjct: 331 LSSLGLYYKARKLNLPKSVRRLLMALLGALTLQ 363

Length = 403

>gnl|CDD|240283 PTZ00127, PTZ00127, cytochrome c oxidase assembly protein; Provisional

 Score =  273 bits (701), Expect = 9e-86
 Identities = 105/228 (46%), Positives = 142/228 (62%), Gaps = 2/228 (0%)

Query: 54  SENVAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRN 113
           S + +   +     +  G+WLLGC+G+V G VVLGG TRLTESGLSM  WK  G K P  
Sbjct: 49  STDASTQWVAPGGEKKVGHWLLGCAGLVGGMVVLGGYTRLTESGLSMTDWKFIGVKPPIT 108

Query: 114 SAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYK 173
             EW +EF+ YK++PE+K  +  +TLEEFK+I++ E+LHRM GR IG  F +P   F  K
Sbjct: 109 QEEWEKEFDKYKQFPEYKQVHYGMTLEEFKKIFFWEWLHRMLGRSIGLFFGLPLLYFAAK 168

Query: 174 GYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFL 233
           GY    M KR+   G L   QG +GW+MV+SGL D    ++  PRVS YRLA+HL  AF+
Sbjct: 169 GYLKPRMLKRLSAIGGLGGAQGFVGWWMVKSGL-DEPLTENKKPRVSPYRLAAHLFNAFV 227

Query: 234 LYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
           +YS LLW  L  +L +   +A     L++ + LA     L+F+TA+SG
Sbjct: 228 IYSLLLWNGLTLILFALPSIAPF-PELLKMRLLARGLFALVFLTAMSG 274

Length = 403

>gnl|CDD|217153 pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein

 Score =  170 bits (434), Expect = 3e-48
 Identities = 112/324 (34%), Positives = 140/324 (43%), Gaps = 67/324 (20%)

Query: 312 YWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKL-FGEKLPRNSAEWIEEFNLYKEYPEF 370
            WLL    +V   VVLGG+TRLT SGL    W   +G   P + A W  EF  YK+ PEF
Sbjct: 2   RWLLVTLALVLAVVVLGGLTRLTGSGLGCPDWPPCYGSLPPLSEAAWAAEFAKYKQTPEF 61

Query: 371 KLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPS 430
           K+  I  + W           H      R+    LA  L +  L+   L+W      +P 
Sbjct: 62  KV--IYWIEW----------GH------RL----LARLLGLLILV--PLVWFWRRRRIPR 97

Query: 431 SKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVP 490
                       R K L  +   L+          L+GL+GW+ V SGL           
Sbjct: 98  ------------RLKWLLLLLLLLV---------GLQGLLGWWTVTSGL----------- 125

Query: 491 RVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVT 550
            VS YRLA+HL +AFLL + LLW AL    P            LR   LA ++  L+ + 
Sbjct: 126 -VSPYRLAAHLLLAFLLLALLLWLALRLREPDPAPAPAAGPRRLR--GLALLALVLLLLQ 182

Query: 551 ALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVF 610
              GA VAGLDAGL  N+FPLM            EP  RNF ENP TVQF HR+     F
Sbjct: 183 IALGALVAGLDAGLACNTFPLMGPD------FPAEPDWRNFFENPATVQFLHRLGAYLTF 236

Query: 611 -SLLTAQYWMGRKLKLPGRANLAL 633
             LL       R+ + P     AL
Sbjct: 237 LLLLALAVAAARRRRRPALRRAAL 260

This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast. Length = 301

>gnl|CDD|217153 pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein

 Score =  165 bits (421), Expect = 2e-46
 Identities = 76/211 (36%), Positives = 103/211 (48%), Gaps = 27/211 (12%)

Query: 72  YWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKL-FGEKLPRNSAEWIEEFNLYKEYPEF 130
            WLL    +V   VVLGG+TRLT SGL    W   +G   P + A W  EF  YK+ PEF
Sbjct: 2   RWLLVTLALVLAVVVLGGLTRLTGSGLGCPDWPPCYGSLPPLSEAAWAAEFAKYKQTPEF 61

Query: 131 KLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLL 190
           K+            I+W+E+ HR+  R +G    +P   FW +      +K  + +  LL
Sbjct: 62  KV------------IYWIEWGHRLLARLLGLLILVPLVWFWRRRRIPRRLKWLLLLLLLL 109

Query: 191 IACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSS 250
           +  QGL+GW+ V SGL            VS YRLA+HL +AFLL + LLW AL    P  
Sbjct: 110 VGLQGLLGWWTVTSGL------------VSPYRLAAHLLLAFLLLALLLWLALRLREPDP 157

Query: 251 KQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
                  AG  R + LA ++  L+ +    G
Sbjct: 158 APAP--AAGPRRLRGLALLALVLLLLQIALG 186

This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast. Length = 301

>gnl|CDD|224528 COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]

 Score =  108 bits (272), Expect = 6e-26
 Identities = 100/346 (28%), Positives = 130/346 (37%), Gaps = 80/346 (23%)

Query: 305 KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLF-GEKLPRNSAEWIEEFNL 363
           K  ++   WL     +V   V +G  TRLT SGLS+V      G        +W   F  
Sbjct: 1   KNRKLVRIWLDAVVALVLKIVRVGAATRLTTSGLSIVEGAPVRGTGSGLGCPDWPLCFGQ 60

Query: 364 YKEY----PEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGL 419
           YK        FKL  I  + W          FH           RL + L    LL   L
Sbjct: 61  YKPPGMTLEVFKL--IFWIEW----------FH-----------RLLAGLI--GLLVLLL 95

Query: 420 LWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGL 479
              A                   R +    +    I   AL     L+GL+G + V SGL
Sbjct: 96  AILAW-----------------RRRRISRELKLAAILALALLI---LQGLIGGWTVTSGL 135

Query: 480 EDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRL 539
             R          S  RLA HL  A ++ + L+WTA     P             + + L
Sbjct: 136 LPR-------IVASHLRLAMHLFAALVILALLIWTADGPGSPRLADGK-------KLRGL 181

Query: 540 AYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQ 599
           A +  GL+++    GA VAGLDAGL YN++PLM  R I            N  E+P TVQ
Sbjct: 182 AGIGLGLLYLQIYLGALVAGLDAGLAYNTWPLMDGRWI-----------TNLGESPETVQ 230

Query: 600 FDHRVLGISVF-SLLTAQYWMGRKLKLPG----RANLALTCVTGMA 640
           F HR+    VF + L       R+  L      RA + L  VT  A
Sbjct: 231 FVHRLGAYLVFVAALLLLVAALRRAPLTRAARTRAVVLLALVTLQA 276

Length = 323

>gnl|CDD|224528 COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]

 Score =  105 bits (264), Expect = 6e-25
 Identities = 64/219 (29%), Positives = 91/219 (41%), Gaps = 25/219 (11%)

Query: 65  KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLF-GEKLPRNSAEWIEEFNL 123
           K  ++   WL     +V   V +G  TRLT SGLS+V      G        +W   F  
Sbjct: 1   KNRKLVRIWLDAVVALVLKIVRVGAATRLTTSGLSIVEGAPVRGTGSGLGCPDWPLCFGQ 60

Query: 124 YKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFW-YKGYFNSAMKK 182
           YK           +TLE FK I+W+E+ HR+    IG    + A + W  +         
Sbjct: 61  YKPP--------GMTLEVFKLIFWIEWFHRLLAGLIGLLVLLLAILAWRRRRISRELKLA 112

Query: 183 RVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTA 242
            +    LLI  QGL+G + V SGL  R          S  RLA HL  A ++ + L+WTA
Sbjct: 113 AILALALLIL-QGLIGGWTVTSGLLPR-------IVASHLRLAMHLFAALVILALLIWTA 164

Query: 243 LDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSG 281
                P         A   + + LA +  GL+++    G
Sbjct: 165 DGPGSPRL-------ADGKKLRGLAGIGLGLLYLQIYLG 196

Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	643
KOG2725|consensus	411		100.0
PTZ00127	403	cytochrome c oxidase assembly protein; Provisional	100.0
PF02628	302	COX15-CtaA: Cytochrome oxidase assembly protein; I	100.0
COG1612	323	CtaA Uncharacterized protein required for cytochro	100.0
KOG2725|consensus	411		100.0
COG1612	323	CtaA Uncharacterized protein required for cytochro	100.0
PTZ00127	403	cytochrome c oxidase assembly protein; Provisional	100.0
PF02628	302	COX15-CtaA: Cytochrome oxidase assembly protein; I	99.97
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	84.65

>KOG2725|consensus

Probab=100.00  E-value=1.3e-84  Score=666.80  Aligned_cols=312  Identities=56%  Similarity=0.956  Sum_probs=288.0

Q ss_pred             cCCCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCCCccc-cCCCChHHHHHHHHhhccCchhhccCC
Q psy4670          57 VAKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPEFKLKNK  135 (643)
Q Consensus        57 ~~~~~~~~~~~~~~~~wl~~~~~lv~~~VvlGg~tRLT~SGLgcpdWp~c~G-~pP~~~~~w~~ef~~yk~~Pey~~~n~  135 (643)
                      ..++.+.++++|.+++|+++|++++|++|++||+||||||||||+||++..| .||.++|||++|||||||+|||+..|.
T Consensus        56 ~~~~~~~~k~~K~Vg~WLlG~sg~Vf~~VvLGGvTRLTeSGLSm~~Wk~~~~~~Pp~~qeeW~~EFekYkqsPEfK~lN~  135 (411)
T KOG2725|consen   56 GSVSLVTKKASKVVGRWLLGCSGLVFGAVVLGGVTRLTESGLSMVDWKLITEMKPPTSQEEWEEEFEKYKQSPEFKLLNS  135 (411)
T ss_pred             CccCCCCcchhhheeeeeeecchhheeeeeecceeeecccCcceeeeeeccCcCCCCchHHHHHHHHHHhcCcchhhhcc
Confidence            3445566899999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             CCChhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCC
Q psy4670         136 DITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSD  215 (643)
Q Consensus       136 ~~~l~~fK~i~~~E~~HR~~g~~~Gl~~l~~~~~~~~~~~~~~~~~~~l~~~~~lv~~Qg~lG~~mV~sgL~~~~~~~~~  215 (643)
                      +||+||||+||||||+||+|||.+|++|++|++|||++++..+.++.+++++..|+++||++|||||+|||+|.. +++|
T Consensus       136 ~Mtl~EFKfIf~mEy~HRmwGR~iG~vflLPa~Yf~~kg~~s~~~~krl~gL~~L~~lQG~iGWwMVKSGLee~~-~~~~  214 (411)
T KOG2725|consen  136 HMTLDEFKFIFFMEYSHRMWGRAIGLVFLLPAAYFWRKGRFSPGMKKRLLGLTGLVGLQGLIGWWMVKSGLEEES-DSHD  214 (411)
T ss_pred             CCcHHHHHHHHHHHHHHHHHhhhhceeehhhhHHHHHhcccCcchhhHHHHHHHHHHhccceeEEEeecCCCCCC-CCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999876 7789


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhHHHHHhhhhhHHHHHHHHhccccccchhhhhhcc
Q psy4670         216 VPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSE  295 (643)
Q Consensus       216 ~~~vs~~~lt~Hl~~al~~~~~l~w~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~lG~~~~~~~~~~~~~e  295 (643)
                      +|||||||+++||+.||++|++++|+++.+..|..+..                                          
T Consensus       215 ~PrVSqYRLAtHL~sAf~LY~g~lWtgls~L~~~~~~~------------------------------------------  252 (411)
T KOG2725|consen  215 VPRVSQYRLATHLGSAFVLYCGSLWTGLSLLLPPAQLL------------------------------------------  252 (411)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcCchhhh------------------------------------------
Confidence            99999999999999999999999999999763321000                                          


Q ss_pred             cccCCCCCCCccchhhhHHHHHHHHHHHHHhhhceeeecccCCCcccccccCCCCCCChHHHHHHHhhhccCchhhhhhh
Q psy4670         296 NVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNI  375 (643)
Q Consensus       296 ~va~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~cg~~~P~~~~~~~~ef~~yk~~Pe~~~~n~  375 (643)
                                                                                              +       
T Consensus       253 ------------------------------------------------------------------------~-------  253 (411)
T KOG2725|consen  253 ------------------------------------------------------------------------S-------  253 (411)
T ss_pred             ------------------------------------------------------------------------H-------
Confidence                                                                                    0       


Q ss_pred             cchhhhhhhcCcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHH
Q psy4670         376 GLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLI  455 (643)
Q Consensus       376 ~~~~w~~~~~~~~~~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~  455 (643)
                                                                   +                                  
T Consensus       254 ---------------------------------------------~----------------------------------  254 (411)
T KOG2725|consen  254 ---------------------------------------------E----------------------------------  254 (411)
T ss_pred             ---------------------------------------------H----------------------------------
Confidence                                                         0                                  


Q ss_pred             HHHHHHHHHHHhhhhhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHH
Q psy4670         456 FVTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLR  535 (643)
Q Consensus       456 ~~~al~~lv~lQG~LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~  535 (643)
                                                                                                .+...+
T Consensus       255 --------------------------------------------------------------------------~~kl~~  260 (411)
T KOG2725|consen  255 --------------------------------------------------------------------------VSKLLK  260 (411)
T ss_pred             --------------------------------------------------------------------------HHHHHH
Confidence                                                                                      001123


Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHhhhccccccCCCcCCCCCCCCccccccCcccccccCCchHHHHHHHHHHHHHHHHHHH
Q psy4670         536 FKRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTA  615 (643)
Q Consensus       536 lr~la~~~~~lv~vqI~lGa~Vag~~AGlac~tfP~m~g~~iP~~~~~~~~~w~n~~en~~~Vqf~HR~lA~l~~~~~l~  615 (643)
                      +|+++....++++++.++||||||+|||++||+||+|++.|+||+.|.+.|+|||++|||++|||+||++|+.+++++..
T Consensus       261 ~r~~~~~~~~~v~lTaiSGafVAGlDAG~vYnsfPKMGe~wipd~~f~r~piwrN~~ENp~tVQ~~HRila~tt~~ai~~  340 (411)
T KOG2725|consen  261 LRKLAHGTKGLVFLTAISGAFVAGLDAGLVYNSFPKMGESWIPDDMFTRSPIWRNFFENPTTVQFDHRILAITTVTAITA  340 (411)
T ss_pred             HHHhhhhhHHHHHHHHHhhhhhhcccccceeccccccccccCccccccccHHHHHhhcCCceEEeehhhHHHHHHHHHHH
Confidence            67777788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCchhhHHHHHHHHHHHhcC
Q psy4670         616 QYWMGRKLKLPGRANLALTCVTGMAYMQ  643 (643)
Q Consensus       616 l~~~~~r~~~p~~~r~~~~~l~~ll~lQ  643 (643)
                      +++..||...|++++.+...+++++..|
T Consensus       341 ~~~~~rr~~lpkr~k~ai~~~v~~v~~Q  368 (411)
T KOG2725|consen  341 LYLITRRAPLPKRTKMAINVTVAVVTTQ  368 (411)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            9998899999999999999999999887

>PTZ00127 cytochrome c oxidase assembly protein; Provisional

Probab=100.00  E-value=9.6e-74  Score=621.11  Aligned_cols=310  Identities=45%  Similarity=0.750  Sum_probs=272.9

Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCCCccc-cCCCChHHHHHHHHhhccCchhhccCCC
Q psy4670          58 AKPNILDKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPEFKLKNKD  136 (643)
Q Consensus        58 ~~~~~~~~~~~~~~~wl~~~~~lv~~~VvlGg~tRLT~SGLgcpdWp~c~G-~pP~~~~~w~~ef~~yk~~Pey~~~n~~  136 (643)
                      ..+-+.++.+|.+++|+++++++++++|++||+||+||||||||||| |+| +||.+|+||++||+|||++|||++.|++
T Consensus        53 ~~~~~~~~~~~~v~~wl~~~~~l~~~~V~~Gg~tRlT~SGLgcpdWp-~~G~~~P~~~~~w~~~f~~yk~~pey~~~~~~  131 (403)
T PTZ00127         53 STQWVAPGGEKKVGHWLLGCAGLVGGMVVLGGYTRLTESGLSMTDWK-FIGVKPPITQEEWEKEFDKYKQFPEYKQVHYG  131 (403)
T ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHcchhhcccccccCCCCCC-CCCEECCCCHHHHHHHHHHhccCchHhhhcCC
Confidence            44445667778999999999999999999999999999999999999 999 9999999999999999999999999999


Q ss_pred             CChhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCC
Q psy4670         137 ITLEEFKRIWWMEYLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDV  216 (643)
Q Consensus       137 ~~l~~fK~i~~~E~~HR~~g~~~Gl~~l~~~~~~~~~~~~~~~~~~~l~~~~~lv~~Qg~lG~~mV~sgL~~~~~~~~~~  216 (643)
                      ||+|+||.|||+||+||++||++|+++++|+++++++++++++...+++++++++++||++|||||+|||+|. .++++.
T Consensus       132 ~~l~~fk~i~~~E~~HRllg~~lGl~~l~~l~~~~~~~~~~~~~~~~l~~ll~L~~~Qg~lG~~~V~sgL~~~-~~~~~~  210 (403)
T PTZ00127        132 MTLEEFKKIFFWEWLHRMLGRSIGLFFGLPLLYFAAKGYLKPRMLKRLSAIGGLGGAQGFVGWWMVKSGLDEP-LTENKK  210 (403)
T ss_pred             CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccccCC
Confidence            9999999999999999999999999999999999998888787888888889999999999999999999873 456788


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhHHHHHhhhhhHHHHHHHHhccccccchhhhhhccc
Q psy4670         217 PRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSEN  296 (643)
Q Consensus       217 ~~vs~~~lt~Hl~~al~~~~~l~w~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~lG~~~~~~~~~~~~~e~  296 (643)
                      |+|||||||+||++|+++|++++|+++++..++.+.                                            
T Consensus       211 p~Vs~~rla~Hll~al~i~~~l~~~~~~l~~~~~~~--------------------------------------------  246 (403)
T PTZ00127        211 PRVSPYRLAAHLFNAFVIYSLLLWNGLTLILFALPS--------------------------------------------  246 (403)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--------------------------------------------
Confidence            999999999999999999999999888753110000                                            


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhhhceeeecccCCCcccccccCCCCCCChHHHHHHHhhhccCchhhhhhhc
Q psy4670         297 VAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIG  376 (643)
Q Consensus       297 va~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~cg~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~  376 (643)
                                                                                                      
T Consensus       247 --------------------------------------------------------------------------------  246 (403)
T PTZ00127        247 --------------------------------------------------------------------------------  246 (403)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhhhhhhcCcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHH
Q psy4670         377 LMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIF  456 (643)
Q Consensus       377 ~~~w~~~~~~~~~~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~  456 (643)
                                                                                   .                  
T Consensus       247 -------------------------------------------------------------~------------------  247 (403)
T PTZ00127        247 -------------------------------------------------------------I------------------  247 (403)
T ss_pred             -------------------------------------------------------------c------------------
Confidence                                                                         0                  


Q ss_pred             HHHHHHHHHHhhhhhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHHH
Q psy4670         457 VTALSGENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRF  536 (643)
Q Consensus       457 ~~al~~lv~lQG~LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~l  536 (643)
                                                                                      .       ..+..+++
T Consensus       248 ----------------------------------------------------------------~-------~~~~~~~l  256 (403)
T PTZ00127        248 ----------------------------------------------------------------A-------PFPELLKM  256 (403)
T ss_pred             ----------------------------------------------------------------c-------ccccchhH
Confidence                                                                            0       00011235


Q ss_pred             HHHHHHHHHHHHHHHHHhHHHhhhccccccCCCcCCCCCCCCccccccCcccccccCCchHHHHHHHHHHHHHHHHHHHH
Q psy4670         537 KRLAYMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQ  616 (643)
Q Consensus       537 r~la~~~~~lv~vqI~lGa~Vag~~AGlac~tfP~m~g~~iP~~~~~~~~~w~n~~en~~~Vqf~HR~lA~l~~~~~l~l  616 (643)
                      |+++.++++++++||++||+|||+|||++|||||+|+|+++|++++...+.|+|++||+..|||+||.+|++++++++++
T Consensus       257 r~l~~~~~~l~~lqI~lGa~Vag~~AGlac~~wP~c~g~~iP~~~~~~~~~~~~~~e~~~~vqf~HR~~A~l~~l~~l~l  336 (403)
T PTZ00127        257 RLLARGLFALVFLTAMSGAFVAGNDAGLAYNTWPKMGGKFVPDDVHNFVPWYKNFFENTAVVQFNHRVLAYLTFLSSLGL  336 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCchhhhhhhhHhhhccchhHHHHHHHHHHHHHHHHHHHH
Confidence            66777788899999999999999999999999999999999998766667899999999999999999999999999999


Q ss_pred             HHHHHhccCchhhHHHHHHHHHHHhcC
Q psy4670         617 YWMGRKLKLPGRANLALTCVTGMAYMQ  643 (643)
Q Consensus       617 ~~~~~r~~~p~~~r~~~~~l~~ll~lQ  643 (643)
                      ++..+|.+.++..++.+..+++++++|
T Consensus       337 ~~~~~r~~~~~~~~~~~~~ll~lv~lQ  363 (403)
T PTZ00127        337 YYKARKLNLPKSVRRLLMALLGALTLQ  363 (403)
T ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence            888888766677888888888888887

>PF02628 COX15-CtaA: Cytochrome oxidase assembly protein; InterPro: IPR003780 This entry represents 2 activities required for heme biosynthesis: Protoheme IX farnesyltransferase converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group

Probab=100.00  E-value=8.6e-52  Score=434.31  Aligned_cols=269  Identities=33%  Similarity=0.488  Sum_probs=236.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCCCccc-cCCCChHHHHHHHHhhccCchhhccCCCCChhhhhhHHHHH
Q psy4670          71 GYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWME  149 (643)
Q Consensus        71 ~~wl~~~~~lv~~~VvlGg~tRLT~SGLgcpdWp~c~G-~pP~~~~~w~~ef~~yk~~Pey~~~n~~~~l~~fK~i~~~E  149 (643)
                      ++|+++++++++++|++||+||+|||||||||||+|+| +||.+|+||++||++||++|            +||.++|+|
T Consensus         1 r~~~~~~~~~~~~li~~G~~vr~tgsGl~CpdWP~C~G~~~P~~~~~w~~~~~~y~~~~------------~~~~~~~~E   68 (302)
T PF02628_consen    1 RRLAWLTAVLTFLLIVLGGLVRLTGSGLGCPDWPLCFGQLPPLSESEWAAEFEKYKQTP------------FFKFHTWIE   68 (302)
T ss_pred             CcHHHHHHHHHHHHHHHhHheeecccccCCCCCcCccCcCCCCCHHHHHHHHHhCcCCc------------cchhhhhHH
Confidence            47899999999999999999999999999999999999 99999999999999999999            456678999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCccchHHHHHHHH
Q psy4670         150 YLHRMWGRCIGAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLS  229 (643)
Q Consensus       150 ~~HR~~g~~~Gl~~l~~~~~~~~~~~~~~~~~~~l~~~~~lv~~Qg~lG~~mV~sgL~~~~~~~~~~~~vs~~~lt~Hl~  229 (643)
                      |+||++|+++|+++++++++++++++.+++....+.++++++++||++|++||+++|            ++|+++++|++
T Consensus        69 ~~HR~~~~~~gl~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lG~~~V~~~l------------~~~~~~~~Hl~  136 (302)
T PF02628_consen   69 WGHRLLAGLVGLLILALAVWAWRKRRIRRRLRWLALLALVLVILQGLLGAWTVLSGL------------VSPYVVTLHLL  136 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcc------------cchHHHHHHHH
Confidence            999999999999999999999998888899999999999999999999999999998            25799999999


Q ss_pred             HHHHHHHHHHHHHHhhhcccchhhhhhhhhhhHHHHHhhhhhHHHHHHHHhccccccchhhhhhcccccCCCCCCCccch
Q psy4670         230 MAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRI  309 (643)
Q Consensus       230 ~al~~~~~l~w~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~lG~~~~~~~~~~~~~e~va~~~~~~~~~~~  309 (643)
                      .|+++|++++|++++..++++ .                                                         
T Consensus       137 ~a~~~~~~l~~~~~~~~~~~~-~---------------------------------------------------------  158 (302)
T PF02628_consen  137 LALLIFALLVWLALRARRPEE-S---------------------------------------------------------  158 (302)
T ss_pred             HHHHHHHHHHHHHHHhcCccc-c---------------------------------------------------------
Confidence            999999999998888531110 0                                                         


Q ss_pred             hhhHHHHHHHHHHHHHhhhceeeecccCCCcccccccCCCCCCChHHHHHHHhhhccCchhhhhhhcchhhhhhhcCccc
Q psy4670         310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLED  389 (643)
Q Consensus       310 ~~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~cg~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~~~~~~~~  389 (643)
                                                                                +                     
T Consensus       159 ----------------------------------------------------------~---------------------  159 (302)
T PF02628_consen  159 ----------------------------------------------------------P---------------------  159 (302)
T ss_pred             ----------------------------------------------------------c---------------------
Confidence                                                                      0                     


Q ss_pred             ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHhhh
Q psy4670         390 RFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGL  469 (643)
Q Consensus       390 ~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~lv~lQG~  469 (643)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (302)
T PF02628_consen  160 --------------------------------------------------------------------------------  159 (302)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4670         470 MGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFV  549 (643)
Q Consensus       470 LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~lr~la~~~~~lv~v  549 (643)
                                                                         +       .....++.|+++..+.+++++
T Consensus       160 ---------------------------------------------------~-------~~~~~~~~~~l~~~~~~l~~~  181 (302)
T PF02628_consen  160 ---------------------------------------------------R-------RLPRPRRLRWLAWAALVLVFI  181 (302)
T ss_pred             ---------------------------------------------------c-------ccccchhHHHHHHHHHHHHHH
Confidence                                                               0       001123567777888899999


Q ss_pred             HHHHhHHHhhhccccccCCCcCCCCCCCCccccccCcccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhh
Q psy4670         550 TALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLPGRA  629 (643)
Q Consensus       550 qI~lGa~Vag~~AGlac~tfP~m~g~~iP~~~~~~~~~w~n~~en~~~Vqf~HR~lA~l~~~~~l~l~~~~~r~~~p~~~  629 (643)
                      |+++|++|+|++||.+|||||+|+.+ +|..    ++.|.+++||+..+|+.||.+|++++++++++++.++|.+.++..
T Consensus       182 qi~lGa~va~~~ag~a~~~~P~~~~~-~~~~----~~~~~~~~~~~~~v~~~Hr~~A~~~~~~~~~l~~~~~r~~~~~~~  256 (302)
T PF02628_consen  182 QIALGALVAGNGAGLACNTWPLMGPD-WPLC----QPDWRNFFDNPGTVQFIHRLLALLVLLLLLALAVRAWRRRRSRAL  256 (302)
T ss_pred             HHhccceeccchHHHhccCCcccCCc-chhc----cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence            99999999999999999999999944 3432    445788999999999999999999999999999998888777889


Q ss_pred             HHHHHHHHHHHhcC
Q psy4670         630 NLALTCVTGMAYMQ  643 (643)
Q Consensus       630 r~~~~~l~~ll~lQ  643 (643)
                      ++.+..+++++++|
T Consensus       257 ~~~~~~~~~ll~~Q  270 (302)
T PF02628_consen  257 RRLAVLLLALLLLQ  270 (302)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998887

Heme A synthase catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group. The entry contains CtaA, which is required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis [] and in Saccharomyces cerevisiae (Baker's yeast) the COX15 protein is required for cytochrome c oxidase assembly.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006461 protein complex assembly, 0055114 oxidation-reduction process, 0016020 membrane

>COG1612 CtaA Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.9e-39  Score=338.56  Aligned_cols=280  Identities=27%  Similarity=0.301  Sum_probs=211.6

Q ss_pred             HHHHHHhhhhhccCCCCCCCCCCCccc--cCCCChHHHHHHHHhhccCchhhccCCCCChhhhhhHHHHHhHHHHHHHHH
Q psy4670          82 FGAVVLGGVTRLTESGLSMVTWKLFGE--KLPRNSAEWIEEFNLYKEYPEFKLKNKDITLEEFKRIWWMEYLHRMWGRCI  159 (643)
Q Consensus        82 ~~~VvlGg~tRLT~SGLgcpdWp~c~G--~pP~~~~~w~~ef~~yk~~Pey~~~n~~~~l~~fK~i~~~E~~HR~~g~~~  159 (643)
                      .++|+.|+.||+|+||+||+|||.|||  +||                        +|+.|+||.++|+||+||++||++
T Consensus        33 ~l~i~~Ga~v~~t~sglgC~~WP~C~g~~~~~------------------------~~~~~~~~~~~~iE~~HRl~a~~~   88 (323)
T COG1612          33 GLSIVEGAPVRGTGSGLGCPDWPLCFGQYKPP------------------------GMTLEVFKLIFWIEWFHRLLAGLI   88 (323)
T ss_pred             hHHHccCcceeeecCCCCCCcchhhcceeecC------------------------ccCccccchHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999  554                        688999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCccchHHHHHHHHHHHHHHHHHH
Q psy4670         160 GAAFFIPASIFWYKGYFNSAMKKRVGVFGLLIACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLL  239 (643)
Q Consensus       160 Gl~~l~~~~~~~~~~~~~~~~~~~l~~~~~lv~~Qg~lG~~mV~sgL~~~~~~~~~~~~vs~~~lt~Hl~~al~~~~~l~  239 (643)
                      |++++++++++|++++++++.++.+.++++++++||++|||||++||.+.       +.++||+++.|+..++++++.++
T Consensus        89 gl~vi~l~~~aw~~~~~~r~~~~~~i~~l~l~~lQgliG~~tV~~gl~~~-------~~~~h~~la~~l~aa~~il~~~~  161 (323)
T COG1612          89 GLLVLLLAILAWRRRRISRELKLAAILALALLILQGLIGGWTVTSGLLPR-------IVASHLRLAMHLFAALVILALLI  161 (323)
T ss_pred             HHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhCCCcc-------hhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999764       34566666666666666666655


Q ss_pred             HHHHhhhcccchhhhhhhhhhhHHHHHhhhhhHHHHHHHHhccccccchhhhhhcccccCCCCCCCccchhhhHHHHHHH
Q psy4670         240 WTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPTRITGYWLLGCSG  319 (643)
Q Consensus       240 w~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~lG~~~~~~~~~~~~~e~va~~~~~~~~~~~~~~~~~~~~~  319 (643)
                      |.+.+ .                                                     +.+.....+++|.+.....+
T Consensus       162 ~~~~~-~-----------------------------------------------------~~~~~~~~~~~r~~a~~~~~  187 (323)
T COG1612         162 WTADG-P-----------------------------------------------------GSPRLADGKKLRGLAGIGLG  187 (323)
T ss_pred             hcccc-c-----------------------------------------------------CccchhccchhHHHHHHHHH
Confidence            54433 0                                                     01122345677777777788


Q ss_pred             HHHHHHhhhceeeecccCCCcccccccCCCCCCChHHHHHHHhhhccCchhhhhhhcchhhhhhhcCcccccccCCCCcc
Q psy4670         320 MVFGAVVLGGVTRLTESGLSMVTWKLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPR  399 (643)
Q Consensus       320 ~~~~~v~~Ga~~r~t~sGl~c~~WP~cg~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~~~~~~~~~f~~~~~~~E  399 (643)
                      ++|..+++||+|++.|+|++|++||+|++..|.+..          +.||                           +..
T Consensus       188 ~~~~~i~~GalV~~~~a~~a~~~~P~~~~~~~~~~~----------~~~~---------------------------~vq  230 (323)
T COG1612         188 LLYLQIYLGALVAGLDAGLAYNTWPLMDGRWITNLG----------ESPE---------------------------TVQ  230 (323)
T ss_pred             HHHHHHHhhhhhhccccccccCCCCCCccccccccc----------ccch---------------------------hhh
Confidence            888888888899999999999999999654443221          1222                           234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhccCC
Q psy4670         400 VSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQSGL  479 (643)
Q Consensus       400 ~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~lv~lQG~LG~~~V~sgL  479 (643)
                      +.||..+..+-...+...+..+.  +...+        +.          ..+   ....+++++..|+.+|-.+|.++.
T Consensus       231 ~~Hr~~a~~~~~~~l~~~~~~~r--~~~~~--------~~----------~~~---~~~~l~~lv~~Q~~~Gi~tv~~~v  287 (323)
T COG1612         231 FVHRLGAYLVFVAALLLLVAALR--RAPLT--------RA----------ART---RAVVLLALVTLQAALGILTVLLGV  287 (323)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHh--ccccc--------hh----------HHH---HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            78999998776655554333322  11011        10          000   234567888999999999999983


Q ss_pred             ccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy4670         480 EDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHL  519 (643)
Q Consensus       480 ~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~  519 (643)
                                   +-....+|-..++++++.+.+.+....
T Consensus       288 -------------pl~~a~~H~~~~~~ll~~~~~~a~~~~  314 (323)
T COG1612         288 -------------PLALALAHQAAALVLLATALLHAWLLA  314 (323)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence                         445778888888888888888766554

>KOG2725|consensus

Probab=100.00  E-value=6e-40  Score=337.77  Aligned_cols=238  Identities=44%  Similarity=0.678  Sum_probs=184.1

Q ss_pred             CCccchhhhHHHHHHHHHHHHHhhhceeeecccCCCcccccccCC-CCCCChHHHHHHHhhhccCchhhhhhhcchhhhh
Q psy4670         304 EKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGE-KLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYM  382 (643)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~cg~-~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~  382 (643)
                      ++..|.+.+|+++|+.++|++|++||.||+|+|||+++||.+.+. .+|.+++||++||||||++||||..|.+|.    
T Consensus        63 ~k~~K~Vg~WLlG~sg~Vf~~VvLGGvTRLTeSGLSm~~Wk~~~~~~Pp~~qeeW~~EFekYkqsPEfK~lN~~Mt----  138 (411)
T KOG2725|consen   63 KKASKVVGRWLLGCSGLVFGAVVLGGVTRLTESGLSMVDWKLITEMKPPTSQEEWEEEFEKYKQSPEFKLLNSHMT----  138 (411)
T ss_pred             cchhhheeeeeeecchhheeeeeecceeeecccCcceeeeeeccCcCCCCchHHHHHHHHHHhcCcchhhhccCCc----
Confidence            567799999999999999999999999999999999999999955 556679999999999999999999998773    


Q ss_pred             hhcCcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHH
Q psy4670         383 VQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSG  462 (643)
Q Consensus       383 ~~~~~~~~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~  462 (643)
                       .++|+-+|     +-||+||++++.+|+++++.+...|.  ++           |..       +.+...   ...+.+
T Consensus       139 -l~EFKfIf-----~mEy~HRmwGR~iG~vflLPa~Yf~~--kg-----------~~s-------~~~~kr---l~gL~~  189 (411)
T KOG2725|consen  139 -LDEFKFIF-----FMEYSHRMWGRAIGLVFLLPAAYFWR--KG-----------RFS-------PGMKKR---LLGLTG  189 (411)
T ss_pred             -HHHHHHHH-----HHHHHHHHHhhhhceeehhhhHHHHH--hc-----------ccC-------cchhhH---HHHHHH
Confidence             22223233     35899999999999998876665553  31           111       122222   346778


Q ss_pred             HHHHhhhhhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHHHHHHH--
Q psy4670         463 ENMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLA--  540 (643)
Q Consensus       463 lv~lQG~LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~lr~la--  540 (643)
                      ++++||++|||||+|||+|.. +++++|||||||+|+||+.||++||.++|+++.+..|+.       ......+++.  
T Consensus       190 L~~lQG~iGWwMVKSGLee~~-~~~~~PrVSqYRLAtHL~sAf~LY~g~lWtgls~L~~~~-------~~~~~~~kl~~~  261 (411)
T KOG2725|consen  190 LVGLQGLIGWWMVKSGLEEES-DSHDVPRVSQYRLATHLGSAFVLYCGSLWTGLSLLLPPA-------QLLSEVSKLLKL  261 (411)
T ss_pred             HHHhccceeEEEeecCCCCCC-CCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcCch-------hhhHHHHHHHHH
Confidence            889999999999999999976 788999999999999999999999999999999987652       1233344433  


Q ss_pred             HHHHHHHHHHHHHhHHHhhhccccccCCCcCCCCCCCCccccccCc
Q psy4670         541 YMSKGLIFVTALSGAFVAGLDAGLVYNSFPLMADRLIPTDILALEP  586 (643)
Q Consensus       541 ~~~~~lv~vqI~lGa~Vag~~AGlac~tfP~m~g~~iP~~~~~~~~  586 (643)
                      .-....+..-+++-|...+..||+..    -+-..-+|.+.+...|
T Consensus       262 r~~~~~~~~~v~lTaiSGafVAGlDA----G~vYnsfPKMGe~wip  303 (411)
T KOG2725|consen  262 RKLAHGTKGLVFLTAISGAFVAGLDA----GLVYNSFPKMGESWIP  303 (411)
T ss_pred             HHhhhhhHHHHHHHHHhhhhhhcccc----cceeccccccccccCc
Confidence            22344555566778888899999774    2223345888765444

>COG1612 CtaA Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4e-38  Score=332.29  Aligned_cols=245  Identities=30%  Similarity=0.346  Sum_probs=187.8

Q ss_pred             HHHHHHHHhhhceeeecccCCCccccccc-CCCCCCChHHHHHHHhhhccCchhhhhhhcchhhhhhhcCcccccccCCC
Q psy4670         318 SGMVFGAVVLGGVTRLTESGLSMVTWKLF-GEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSD  396 (643)
Q Consensus       318 ~~~~~~~v~~Ga~~r~t~sGl~c~~WP~c-g~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~~~~~~~~~f~~~~~  396 (643)
                      ..-++++++.|+.||.|+||+||+|||+| |+..|..           ...++++.                      +.
T Consensus        29 l~~~~l~i~~Ga~v~~t~sglgC~~WP~C~g~~~~~~-----------~~~~~~~~----------------------~~   75 (323)
T COG1612          29 LTTSGLSIVEGAPVRGTGSGLGCPDWPLCFGQYKPPG-----------MTLEVFKL----------------------IF   75 (323)
T ss_pred             HHHhhHHHccCcceeeecCCCCCCcchhhcceeecCc-----------cCccccch----------------------HH
Confidence            33347999999999999999999999999 7766531           01122111                      24


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhc
Q psy4670         397 VPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGLMGWYMVQ  476 (643)
Q Consensus       397 ~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~lv~lQG~LG~~~V~  476 (643)
                      |.||+||++++.+|++++.+++++|+..|..++                    ..+   ...+.++++++||++|||||+
T Consensus        76 ~iE~~HRl~a~~~gl~vi~l~~~aw~~~~~~r~--------------------~~~---~~i~~l~l~~lQgliG~~tV~  132 (323)
T COG1612          76 WIEWFHRLLAGLIGLLVLLLAILAWRRRRISRE--------------------LKL---AAILALALLILQGLIGGWTVT  132 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc--------------------chH---HHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999999864221111                    111   234567788999999999999


Q ss_pred             cCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhHH
Q psy4670         477 SGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGAF  556 (643)
Q Consensus       477 sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~lr~la~~~~~lv~vqI~lGa~  556 (643)
                      +||.+.       +.++|++++.|+..++++++.++|.+.. .      ..++....+++|.++....+++++|+++|++
T Consensus       133 ~gl~~~-------~~~~h~~la~~l~aa~~il~~~~~~~~~-~------~~~~~~~~~~~r~~a~~~~~~~~~~i~~Gal  198 (323)
T COG1612         133 SGLLPR-------IVASHLRLAMHLFAALVILALLIWTADG-P------GSPRLADGKKLRGLAGIGLGLLYLQIYLGAL  198 (323)
T ss_pred             hCCCcc-------hhHHHHHHHHHHHHHHHHHHHHHhcccc-c------CccchhccchhHHHHHHHHHHHHHHHHhhhh
Confidence            999874       4566666666666666666666665544 0      0112234678999999999999999999999


Q ss_pred             HhhhccccccCCCcCCCCCCCCccccccCcccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCchhhHHHHHH
Q psy4670         557 VAGLDAGLVYNSFPLMADRLIPTDILALEPPLRNFTENPTTVQFDHRVLGISVFSLLTAQYWMGRK-LKLPGRANLALTC  635 (643)
Q Consensus       557 Vag~~AGlac~tfP~m~g~~iP~~~~~~~~~w~n~~en~~~Vqf~HR~lA~l~~~~~l~l~~~~~r-~~~p~~~r~~~~~  635 (643)
                      |+++||+++||+||+||+ ++|          .|..|++..||+.||..|+.++++.+++....+| .+.++..++....
T Consensus       199 V~~~~a~~a~~~~P~~~~-~~~----------~~~~~~~~~vq~~Hr~~a~~~~~~~l~~~~~~~r~~~~~~~~~~~~~~  267 (323)
T COG1612         199 VAGLDAGLAYNTWPLMDG-RWI----------TNLGESPETVQFVHRLGAYLVFVAALLLLVAALRRAPLTRAARTRAVV  267 (323)
T ss_pred             hhccccccccCCCCCCcc-ccc----------ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence            999999999999999995 444          4677899999999999999999999988555555 5678888988888


Q ss_pred             HHHHHhcC
Q psy4670         636 VTGMAYMQ  643 (643)
Q Consensus       636 l~~ll~lQ  643 (643)
                      +++++.+|
T Consensus       268 l~~lv~~Q  275 (323)
T COG1612         268 LLALVTLQ  275 (323)
T ss_pred             HHHHHHHH
Confidence            88888877

>PTZ00127 cytochrome c oxidase assembly protein; Provisional

Probab=100.00  E-value=2.8e-37  Score=336.02  Aligned_cols=181  Identities=44%  Similarity=0.734  Sum_probs=146.5

Q ss_pred             CccchhhhHHHHHHHHHHHHHhhhceeeecccCCCccccccc-CCCCCCChHHHHHHHhhhccCchhhhhhhcchhhhhh
Q psy4670         305 KPTRITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLF-GEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMV  383 (643)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~c-g~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~~  383 (643)
                      +.+|.+++|+++++++++++|++||+||+||||||||||| | |..+|.+++||++||||||++|||+..|.+|.     
T Consensus        60 ~~~~~v~~wl~~~~~l~~~~V~~Gg~tRlT~SGLgcpdWp-~~G~~~P~~~~~w~~~f~~yk~~pey~~~~~~~~-----  133 (403)
T PTZ00127         60 GGEKKVGHWLLGCAGLVGGMVVLGGYTRLTESGLSMTDWK-FIGVKPPITQEEWEKEFDKYKQFPEYKQVHYGMT-----  133 (403)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcchhhcccccccCCCCCC-CCCEECCCCHHHHHHHHHHhccCchHhhhcCCCC-----
Confidence            4557899999999999999999999999999999999999 9 77889999999999999999999999886552     


Q ss_pred             hcCcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHH
Q psy4670         384 QSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGE  463 (643)
Q Consensus       384 ~~~~~~~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~l  463 (643)
                         +| .|+.+. |.||+||++++++|+++++...+.  .+|++.+.       +              ......+++++
T Consensus       134 ---l~-~fk~i~-~~E~~HRllg~~lGl~~l~~l~~~--~~~~~~~~-------~--------------~~~~l~~ll~L  185 (403)
T PTZ00127        134 ---LE-EFKKIF-FWEWLHRMLGRSIGLFFGLPLLYF--AAKGYLKP-------R--------------MLKRLSAIGGL  185 (403)
T ss_pred             ---HH-HhhhHH-HHHHHHHHHHHHHHHHHHHHHHHH--HHhcccCc-------c--------------cHHHHHHHHHH
Confidence               11 122221 689999999999999988633222  22221110       0              01123456677


Q ss_pred             HHHhhhhhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhC
Q psy4670         464 NMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLL  520 (643)
Q Consensus       464 v~lQG~LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~  520 (643)
                      +++||++|||||+|||+| .+++..+|+|||||||+||++|+++|++++|+++.+..
T Consensus       186 ~~~Qg~lG~~~V~sgL~~-~~~~~~~p~Vs~~rla~Hll~al~i~~~l~~~~~~l~~  241 (403)
T PTZ00127        186 GGAQGFVGWWMVKSGLDE-PLTENKKPRVSPYRLAAHLFNAFVIYSLLLWNGLTLIL  241 (403)
T ss_pred             HHHHHHHHHHHHHhcccc-cccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            899999999999999988 56678899999999999999999999999999988763

>PF02628 COX15-CtaA: Cytochrome oxidase assembly protein; InterPro: IPR003780 This entry represents 2 activities required for heme biosynthesis: Protoheme IX farnesyltransferase converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group

Probab=99.97  E-value=4.9e-30  Score=269.66  Aligned_cols=258  Identities=23%  Similarity=0.251  Sum_probs=176.0

Q ss_pred             hhHHHHHHHHHHHHHhhhceeeecccCCCccccccc-CCCCCCChHHHHHHHhhhccCchhhhhhhcchhhhhhhcCccc
Q psy4670         311 GYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLF-GEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLED  389 (643)
Q Consensus       311 ~~~~~~~~~~~~~~v~~Ga~~r~t~sGl~c~~WP~c-g~~~P~~~~~~~~ef~~yk~~Pe~~~~n~~~~~w~~~~~~~~~  389 (643)
                      |++.+++++++|++|++||+||.|||||||||||+| |+.+|.+++||.+|||+||++||++.                 
T Consensus         1 r~~~~~~~~~~~~li~~G~~vr~tgsGl~CpdWP~C~G~~~P~~~~~w~~~~~~y~~~~~~~~-----------------   63 (302)
T PF02628_consen    1 RRLAWLTAVLTFLLIVLGGLVRLTGSGLGCPDWPLCFGQLPPLSESEWAAEFEKYKQTPFFKF-----------------   63 (302)
T ss_pred             CcHHHHHHHHHHHHHHHhHheeecccccCCCCCcCccCcCCCCCHHHHHHHHHhCcCCccchh-----------------
Confidence            578899999999999999999999999999999999 88888899999999999999997543                 


Q ss_pred             ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHhhh
Q psy4670         390 RFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGENMLRGL  469 (643)
Q Consensus       390 ~f~~~~~~~E~~HR~la~~lGll~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~l~~~~al~~lv~lQG~  469 (643)
                           +.|.||+||++++.+|+++++.++++|...|.+++                    +   .....+.++++++||+
T Consensus        64 -----~~~~E~~HR~~~~~~gl~~l~~~~~~~~~~~~~~~--------------------~---~~~~~~~~~l~~~Q~~  115 (302)
T PF02628_consen   64 -----HTWIEWGHRLLAGLVGLLILALAVWAWRKRRIRRR--------------------L---RWLALLALVLVILQGL  115 (302)
T ss_pred             -----hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc--------------------h---HHHHHHHHHHHHHHHH
Confidence                 35689999999999999999998888753221110                    0   1134567788999999


Q ss_pred             hhhhhhccCCccccccCCCCCccchHHHHHHhHHHHHHHHHHHHHHHHhhCccchhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4670         470 MGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFV  549 (643)
Q Consensus       470 LG~~~V~sgL~p~~~~~~~~~~vSp~~va~HLl~A~li~~lllwlal~l~~~~~~~~~~~~~~~~~lr~la~~~~~lv~v  549 (643)
                      +|++||+++|            ++|+++++|++.|++++++++|+++...+++     +..+.....+++...+.+... 
T Consensus       116 lG~~~V~~~l------------~~~~~~~~Hl~~a~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~-  177 (302)
T PF02628_consen  116 LGAWTVLSGL------------VSPYVVTLHLLLALLIFALLVWLALRARRPE-----ESPRRLPRPRRLRWLAWAALV-  177 (302)
T ss_pred             HHHHHHHhcc------------cchHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----ccccccccchhHHHHHHHHHH-
Confidence            9999999986            3678999999999999999999999987432     122333444555555444333 


Q ss_pred             HHHHhHHHhhhccccccCCCcCCCC--CCCCccccccCccccccc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy4670         550 TALSGAFVAGLDAGLVYNSFPLMAD--RLIPTDILALEPPLRNFT-ENPTTVQFDHRVLGISVFSLLTAQYWMGRKLKLP  626 (643)
Q Consensus       550 qI~lGa~Vag~~AGlac~tfP~m~g--~~iP~~~~~~~~~w~n~~-en~~~Vqf~HR~lA~l~~~~~l~l~~~~~r~~~p  626 (643)
                      -++.=....+..+|      +..+.  .-+|.++-+ .+..+... +........|..=-+...+..+.+.+...+....
T Consensus       178 l~~~qi~lGa~va~------~~ag~a~~~~P~~~~~-~~~~~~~~~~~~~~~~~v~~~Hr~~A~~~~~~~~~l~~~~~r~  250 (302)
T PF02628_consen  178 LVFIQIALGALVAG------NGAGLACNTWPLMGPD-WPLCQPDWRNFFDNPGTVQFIHRLLALLVLLLLLALAVRAWRR  250 (302)
T ss_pred             HHHHHHhccceecc------chHHHhccCCcccCCc-chhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            22222223333333      22221  234655411 22221112 2223455566666666667666666666666544


Q ss_pred             hhhHHHHHHHHH
Q psy4670         627 GRANLALTCVTG  638 (643)
Q Consensus       627 ~~~r~~~~~l~~  638 (643)
                      ++.+........
T Consensus       251 ~~~~~~~~~~~~  262 (302)
T PF02628_consen  251 RRSRALRRLAVL  262 (302)
T ss_pred             cCcHHHHHHHHH
Confidence            444444444333

Heme A synthase catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group. The entry contains CtaA, which is required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis [] and in Saccharomyces cerevisiae (Baker's yeast) the COX15 protein is required for cytochrome c oxidase assembly.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006461 protein complex assembly, 0055114 oxidation-reduction process, 0016020 membrane

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=84.65  E-value=0.29  Score=51.60  Aligned_cols=91  Identities=18%  Similarity=0.169  Sum_probs=0.0

Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhHHHHHhhhhhHHHHHHHHhccccccchhhhhhc
Q psy4670         215 DVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLS  294 (643)
Q Consensus       215 ~~~~vs~~~lt~Hl~~al~~~~~l~w~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~lG~~~~~~~~~~~~~  294 (643)
                      +.||-.|---.+-|+.-++++++++|...-..  +-     ++.+...+..+|.+.++++++-++.              
T Consensus        14 r~pr~p~~~a~l~~~~llll~ail~w~~iims--d~-----t~~a~~vl~sfAvvliiIIiIImlF--------------   72 (381)
T PF05297_consen   14 RPPRCPQPHASLLFGLLLLLVAILVWFFIIMS--DL-----TQGALTVLYSFAVVLIIIIIIIMLF--------------   72 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHh--cc-----ccchHHHHHHHHHHHHHHHHHHHHH--------------
Confidence            45677775444444445566777888765431  11     1122334555666555555554444              


Q ss_pred             ccccCCCCCCCccchhhhHHHHHHHHHHHHHhhhceeeecccC
Q psy4670         295 ENVAKPNILEKPTRITGYWLLGCSGMVFGAVVLGGVTRLTESG  337 (643)
Q Consensus       295 e~va~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ga~~r~t~sG  337 (643)
                                 .++.+.-.-+.|.++.++++++-+..++|+--
T Consensus        73 -----------~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~  104 (381)
T PF05297_consen   73 -----------KRRLLCPLGLLCIILIMIVLLVSMLWTLTGQT  104 (381)
T ss_dssp             -------------------------------------------
T ss_pred             -----------HHhhcCcchHHHHHHHHHHHHHHHHHHhhccH
Confidence                       24566667788888888888888887777754

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00