Psyllid ID: psy4701


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
MGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
cccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccc
ccccHHHHHHHHHHHHHHHcccccHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccc
MGTVKGKRQAAQGLARLgitlnpevafpgerslEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKekgplevgssimaKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
mgtvkgkrqaAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKekgplevgssimAKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
MGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
*************LARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVA*****
********QAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASK***
**********AQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
**TVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASKK**
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MGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVACECIIAVASKKDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query124 2.2.26 [Sep-21-2011]
Q5RAP0 929 Protein unc-45 homolog A yes N/A 0.612 0.081 0.631 4e-20
Q9H3U1 944 Protein unc-45 homolog A yes N/A 0.612 0.080 0.631 4e-20
Q99KD5 944 Protein unc-45 homolog A yes N/A 0.612 0.080 0.631 5e-20
Q32PZ3 944 Protein unc-45 homolog A yes N/A 0.612 0.080 0.631 6e-20
Q68F64 927 Protein unc-45 homolog B N/A N/A 0.846 0.113 0.418 2e-18
D7REX8 927 Protein unc-45 homolog B no N/A 0.846 0.113 0.410 5e-18
Q6DGE9 934 Protein unc-45 homolog B yes N/A 0.693 0.092 0.488 2e-16
Q8CGY6 931 Protein unc-45 homolog B no N/A 0.620 0.082 0.506 4e-16
Q8IWX7 931 Protein unc-45 homolog B no N/A 0.620 0.082 0.467 5e-11
>sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1 Back     alignment and function desciption
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 57/76 (75%)

Query: 2   GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCN 61
           GT  G+ +AAQ LA+L IT NPE+ FPGER  EVVRPL+SLLH   + L+ FE LMAL N
Sbjct: 685 GTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTN 744

Query: 62  LAAIGEKQRQRILKEK 77
           LA I E+ RQ+ILKEK
Sbjct: 745 LAGISERLRQKILKEK 760




May act as co-chaperone for HSP90 (Potential). Prevents the stimulation of HSP90AB1 ATPase activity by AHSA1. Positive factor in promoting PGR function in the cell (By similarity). May be necessary for proper folding of myosin (Potential). Necessary for normal cell proliferation. Necessary for normal myotube formation and myosin accumulation during muscle cell development. May play a role in erythropoiesis in stroma cells in the spleen.
Pongo abelii (taxid: 9601)
>sp|Q9H3U1|UN45A_HUMAN Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1 Back     alignment and function description
>sp|Q99KD5|UN45A_MOUSE Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2 Back     alignment and function description
>sp|Q32PZ3|UN45A_RAT Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1 Back     alignment and function description
>sp|Q68F64|UN45B_XENLA Protein unc-45 homolog B OS=Xenopus laevis GN=unc45b PE=2 SV=1 Back     alignment and function description
>sp|D7REX8|UN45B_XENTR Protein unc-45 homolog B OS=Xenopus tropicalis GN=unc45b PE=1 SV=1 Back     alignment and function description
>sp|Q6DGE9|UN45B_DANRE Protein unc-45 homolog B OS=Danio rerio GN=unc45b PE=1 SV=2 Back     alignment and function description
>sp|Q8CGY6|UN45B_MOUSE Protein unc-45 homolog B OS=Mus musculus GN=Unc45b PE=1 SV=1 Back     alignment and function description
>sp|Q8IWX7|UN45B_HUMAN Protein unc-45 homolog B OS=Homo sapiens GN=UNC45B PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query124
183979249 943 similar to CG2708-PA [Papilio xuthus] 0.620 0.081 0.727 9e-27
118780595 951 AGAP003727-PA [Anopheles gambiae str. PE 0.685 0.089 0.635 1e-26
312378002 861 hypothetical protein AND_10529 [Anophele 0.620 0.089 0.688 2e-26
170030835 952 translocase of outer membrane 34 [Culex 0.733 0.095 0.608 2e-26
357628299 872 hypothetical protein KGM_14414 [Danaus p 0.620 0.088 0.714 2e-26
242010879 944 heat shock protein 70 HSP70 interacting 0.620 0.081 0.688 4e-26
332024716 939 Protein unc-45-like protein A [Acromyrme 0.887 0.117 0.513 1e-25
157120910 514 hypothetical protein AaeL_AAEL009168 [Ae 0.620 0.149 0.662 1e-25
340722717 940 PREDICTED: LOW QUALITY PROTEIN: protein 0.620 0.081 0.701 2e-25
350424382 940 PREDICTED: protein unc-45 homolog B-like 0.620 0.081 0.701 2e-25
>gi|183979249|dbj|BAG30786.1| similar to CG2708-PA [Papilio xuthus] Back     alignment and taxonomy information
 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 65/77 (84%)

Query: 2   GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCN 61
           GT  GK+QAAQ LAR+GIT+NPEVAFPG+R+LEVVRPL++LLHP+ TALE FE LMALCN
Sbjct: 681 GTQNGKKQAAQALARIGITINPEVAFPGQRNLEVVRPLIALLHPDCTALENFEALMALCN 740

Query: 62  LAAIGEKQRQRILKEKG 78
           LA + E  R RILKE G
Sbjct: 741 LAGMNETTRNRILKEGG 757




Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118780595|ref|XP_310258.5| AGAP003727-PA [Anopheles gambiae str. PEST] gi|116130924|gb|EAA05979.3| AGAP003727-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312378002|gb|EFR24690.1| hypothetical protein AND_10529 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|170030835|ref|XP_001843293.1| translocase of outer membrane 34 [Culex quinquefasciatus] gi|167868412|gb|EDS31795.1| translocase of outer membrane 34 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|357628299|gb|EHJ77688.1| hypothetical protein KGM_14414 [Danaus plexippus] Back     alignment and taxonomy information
>gi|242010879|ref|XP_002426185.1| heat shock protein 70 HSP70 interacting protein, putative [Pediculus humanus corporis] gi|212510236|gb|EEB13447.1| heat shock protein 70 HSP70 interacting protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|332024716|gb|EGI64905.1| Protein unc-45-like protein A [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|157120910|ref|XP_001659790.1| hypothetical protein AaeL_AAEL009168 [Aedes aegypti] gi|108874768|gb|EAT38993.1| AAEL009168-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|340722717|ref|XP_003399749.1| PREDICTED: LOW QUALITY PROTEIN: protein unc-45 homolog B-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350424382|ref|XP_003493777.1| PREDICTED: protein unc-45 homolog B-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query124
FB|FBgn0010812 947 unc-45 [Drosophila melanogaste 0.693 0.090 0.604 4.3e-22
UNIPROTKB|A5PKJ5 929 UNC45A "Uncharacterized protei 0.661 0.088 0.602 5.8e-18
UNIPROTKB|Q9H3U1 944 UNC45A "Protein unc-45 homolog 0.661 0.086 0.602 5.9e-18
UNIPROTKB|F1RMH7 944 UNC45A "Uncharacterized protei 0.661 0.086 0.602 5.9e-18
MGI|MGI:2142246 944 Unc45a "unc-45 homolog A (C. e 0.661 0.086 0.602 5.9e-18
RGD|1305357 944 Unc45a "unc-45 homolog A (C. e 0.661 0.086 0.602 5.9e-18
ZFIN|ZDB-GENE-050417-158 935 unc45a "unc-45 homolog A (C. e 0.887 0.117 0.467 2e-17
ZFIN|ZDB-GENE-020919-3 934 unc45b "unc-45 homolog B (C. e 0.653 0.086 0.518 7.3e-15
RGD|1305666 735 Unc45b "unc-45 homolog B (C. e 0.612 0.103 0.513 3.7e-14
MGI|MGI:2443377 931 Unc45b "unc-45 homolog B (C. e 0.612 0.081 0.513 5.2e-14
FB|FBgn0010812 unc-45 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 262 (97.3 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
 Identities = 52/86 (60%), Positives = 67/86 (77%)

Query:     2 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCN 61
             GT KGKR A Q LAR+GIT+NPEV+F G+RSL+V+RPLL+LL  + TALE FE LMAL N
Sbjct:   685 GTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTN 744

Query:    62 LAAIGEKQRQRILKEKGPLEVGSSIM 87
             LA++ E  RQRI+KE+G  ++   +M
Sbjct:   745 LASMNESVRQRIIKEQGVSKIEYYLM 770


GO:0061077 "chaperone-mediated protein folding" evidence=IDA
GO:0034605 "cellular response to heat" evidence=IDA
GO:0007525 "somatic muscle development" evidence=IMP
GO:0031034 "myosin filament assembly" evidence=IMP
UNIPROTKB|A5PKJ5 UNC45A "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H3U1 UNC45A "Protein unc-45 homolog A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMH7 UNC45A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2142246 Unc45a "unc-45 homolog A (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305357 Unc45a "unc-45 homolog A (C. elegans)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-158 unc45a "unc-45 homolog A (C. elegans)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020919-3 unc45b "unc-45 homolog B (C. elegans)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1305666 Unc45b "unc-45 homolog B (C. elegans)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2443377 Unc45b "unc-45 homolog B (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9H3U1UN45A_HUMANNo assigned EC number0.63150.61290.0805yesN/A
Q99KD5UN45A_MOUSENo assigned EC number0.63150.61290.0805yesN/A
Q32PZ3UN45A_RATNo assigned EC number0.63150.61290.0805yesN/A
Q5RAP0UN45A_PONABNo assigned EC number0.63150.61290.0818yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query124
pfam11701155 pfam11701, UNC45-central, Myosin-binding striated 1e-04
>gnl|CDD|221172 pfam11701, UNC45-central, Myosin-binding striated muscle assembly central Back     alignment and domain information
 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 78  GPLEVGSSIMAKEGILEMVLVMAN-TEDILQQKVACECIIAVASKKDK 124
           GP +VG+++   EG LE +L +   +E    Q  A E + A    K+ 
Sbjct: 73  GPPDVGATLFLSEGFLESLLPLVARSERRKLQLAALELLSAACIDKEC 120


The UNC-45 or small muscle protein 1 of C.elegans is expressed in two forms from different genomic positions in mammals, as a general tissue protein UNC-45a and a specific form Unc-45b expressed only in striated and skeletal muscle. All members carry up to three amino-terminal tetratricopeptide repeat (TPR) domains towards their N-terminal, a UCS domain at the C-terminal that contains a number of Arm repeats pfam00514 and this central region of approximately 400 residues. Both the general form and the muscle form of UNC-45 function in myotube formation through cell fusion. Myofibril formation requires both GC and SM UNC-45, consistent with the fact that the cytoskeleton is necessary for the development and maintenance of organised myofibrils. The S. pombe Rng3p, is crucial for cell shape, normal actin cytoskeleton, and contractile ring assembly, and is essential for assembly of the myosin II-containing progenitors of the contractile ring. Widespread defects in the cytoskeleton are found in null mutants of all three fungal proteins. Mammalian Unc45 is found to act as a specific chaperone during the folding of myosin and the assembly of striated muscle by forming a stable complex with the general chaperone Hsp90. The exact function of this central region is not known. Length = 155

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 124
KOG4151|consensus 748 99.6
PF11701157 UNC45-central: Myosin-binding striated muscle asse 97.62
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 97.29
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 97.02
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 95.94
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 94.01
PF0051441 Arm: Armadillo/beta-catenin-like repeat; InterPro: 93.99
KOG0166|consensus 514 93.91
KOG4224|consensus550 93.71
PF10508 503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 91.94
smart0018541 ARM Armadillo/beta-catenin-like repeats. Approx. 4 90.86
KOG0166|consensus 514 89.69
COG5064 526 SRP1 Karyopherin (importin) alpha [Intracellular t 88.57
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 86.57
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 84.62
PF04826 254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 83.76
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 82.75
PF0051441 Arm: Armadillo/beta-catenin-like repeat; InterPro: 82.27
KOG2171|consensus 1075 81.42
PF05804 708 KAP: Kinesin-associated protein (KAP) 80.93
>KOG4151|consensus Back     alignment and domain information
Probab=99.60  E-value=1.1e-15  Score=137.24  Aligned_cols=88  Identities=43%  Similarity=0.585  Sum_probs=83.9

Q ss_pred             CchhhHHHHHHHHHHHhHhhCCCcccCCCCCCcchHhhHhhcCCCCchhhhhHHHHHHHhhcCCChHHHHHHHHccchhh
Q psy4701           2 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLE   81 (124)
Q Consensus         2 ~~~~~~~~A~qaLAkilIs~nP~l~F~~~~~~~~v~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~G~s~   81 (124)
                      +|+.|++++.||||  +     .+-|++++++++++|+.+++|+|+.++++||+|+|||||||++++.|.+|+++++...
T Consensus       516 q~e~akl~~~~aL~--~-----~i~f~~~~~~~v~~~~~s~~~~d~~~~en~E~L~altnLas~s~s~r~~i~ke~~~~~  588 (748)
T KOG4151|consen  516 QFEEAKLKWYHALA--G-----KIDFPGERSYEVVKPLDSALHNDEKGLENFEALEALTNLASISESDRQKILKEKALGK  588 (748)
T ss_pred             hchHHHHHHHHHHh--h-----hcCCCCCchhhhhhhhcchhhhhHHHHHHHHHHHHhhcccCcchhhHHHHHHHhcchh
Confidence            47889999999999  2     8899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccchHHHHH
Q psy4701          82 VGSSIMAKEGILEMV   96 (124)
Q Consensus        82 IEnlLls~n~~Lqra   96 (124)
                      ||+++.++|..+||+
T Consensus       589 ie~~~~ee~~~lqra  603 (748)
T KOG4151|consen  589 IEELMTEENPALQRA  603 (748)
T ss_pred             hHHHhhcccHHHHHH
Confidence            999999999999887



>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>KOG4224|consensus Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>smart00185 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless Back     alignment and domain information
>KOG2171|consensus Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query124
3now_A 810 Unc-45 From Drosophila Melanogaster Length = 810 7e-26
3now_A 810 Unc-45 From Drosophila Melanogaster Length = 810 4e-14
>pdb|3NOW|A Chain A, Unc-45 From Drosophila Melanogaster Length = 810 Back     alignment and structure

Iteration: 1

Score = 112 bits (279), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 52/86 (60%), Positives = 67/86 (77%) Query: 2 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCN 61 GT KGKR A Q LAR+GIT+NPEV+F G+RSL+V+RPLL+LL + TALE FE LMAL N Sbjct: 548 GTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTN 607 Query: 62 LAAIGEKQRQRILKEKGPLEVGSSIM 87 LA++ E RQRI+KE+G ++ +M Sbjct: 608 LASMNESVRQRIIKEQGVSKIEYYLM 633
>pdb|3NOW|A Chain A, Unc-45 From Drosophila Melanogaster Length = 810 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query124
3opb_A 778 SWI5-dependent HO expression protein 4; heat and a 1e-17
3opb_A 778 SWI5-dependent HO expression protein 4; heat and a 1e-04
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 5e-14
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778 Back     alignment and structure
 Score = 76.4 bits (187), Expect = 1e-17
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 5   KGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLL-------------HPEATALE 51
             +    + L R+ I  NP + F    +L  +  L  LL               +    +
Sbjct: 516 PIRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTD 575

Query: 52  TFEGLMALCNLAAIGEKQRQRILKEKGPLEVGSSIMAKEGILEMVLVMANTEDILQQKVA 111
            +E L+AL NLA+      + + K          I++ +     +  +   E++  Q+  
Sbjct: 576 NYEALLALTNLASSETSDGEEVCKH---------IVSTKVYWSTIENLMLDENVPLQRST 626

Query: 112 CECI 115
            E I
Sbjct: 627 LELI 630


>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query124
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 99.9
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 99.69
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 98.33
3ul1_B 510 Importin subunit alpha-2; arm repeat, armadillo re 98.31
3tpo_A 529 Importin subunit alpha-2; nuclear import, protein 97.86
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 97.76
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.69
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 97.68
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.49
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.33
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 97.28
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 97.27
4hxt_A 252 De novo protein OR329; structural genomics, PSI-bi 97.25
3tpo_A 529 Importin subunit alpha-2; nuclear import, protein 97.22
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 97.21
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 97.18
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 97.14
3ul1_B 510 Importin subunit alpha-2; arm repeat, armadillo re 97.14
3l6x_A 584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 97.0
2jdq_A 450 Importin alpha-1 subunit; transport, PB2 subunit, 96.92
2jdq_A 450 Importin alpha-1 subunit; transport, PB2 subunit, 96.88
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 96.73
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 96.66
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 96.65
3nmz_A 458 APC variant protein; protein-protein complex, arma 96.56
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 96.55
3l6x_A 584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 96.51
3nmz_A458 APC variant protein; protein-protein complex, arma 96.47
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 96.45
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 96.44
3tt9_A 233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 96.35
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 96.35
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 96.32
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 96.21
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 96.14
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 95.61
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 95.61
4gmo_A 684 Putative uncharacterized protein; ARM, heat, solen 94.64
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 92.24
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 92.11
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 90.94
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 89.27
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 88.28
1te4_A131 Conserved protein MTH187; methanobacterium thermoa 88.09
1oyz_A 280 Hypothetical protein YIBA; structural genomics, PS 87.8
3grl_A 651 General vesicular transport factor P115; vesicle t 86.77
1oyz_A280 Hypothetical protein YIBA; structural genomics, PS 84.93
2vgl_B 591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 83.86
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 82.39
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=99.90  E-value=1.1e-23  Score=188.64  Aligned_cols=115  Identities=20%  Similarity=0.259  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHHHhHhhCCCcccCCCCCCcchHhhHhhcCC--C-----------CchhhhhHHHHHHHhhcCCC----hH
Q psy4701           6 GKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHP--E-----------ATALETFEGLMALCNLAAIG----EK   68 (124)
Q Consensus         6 ~~~~A~qaLAkilIs~nP~l~F~~~~~~~~v~pL~~LL~~--~-----------~~~l~~fEaLlALTNLAs~~----~~   68 (124)
                      +|..|+||||||+|++||.++|++|+++++||||+.||++  +           .+.+|+|||||||||||+.+    |+
T Consensus       517 ~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~  596 (778)
T 3opb_A          517 IRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEE  596 (778)
T ss_dssp             HHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchH
Confidence            8999999999999999999999999889999999999983  3           34589999999999999998    57


Q ss_pred             HHHHHHHc-cchhhhhhhhhccchHHHH----------------------------------HHHHhCCcchHHHHHHHH
Q psy4701          69 QRQRILKE-KGPLEVGSSIMAKEGILEM----------------------------------VLVMANTEDILQQKVACE  113 (124)
Q Consensus        69 ~r~~Iv~~-~G~s~IEnlLls~n~~Lqr----------------------------------al~M~~S~d~~~Q~~a~e  113 (124)
                      +|++|+++ ++|+.++++|+++|..+|+                                  .++|+.++|+..|.+|++
T Consensus       597 ~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAag  676 (778)
T 3opb_A          597 VCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAA  676 (778)
T ss_dssp             HHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHH
T ss_pred             HHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHH
Confidence            89999996 8999999999997666555                                  346778888889999999


Q ss_pred             HHHHHhh
Q psy4701         114 CIIAVAS  120 (124)
Q Consensus       114 ~ii~a~s  120 (124)
                      +|.+.++
T Consensus       677 ALAnLts  683 (778)
T 3opb_A          677 IFANIAT  683 (778)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhcC
Confidence            9998764



>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query124
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 97.91
d1q1sc_ 434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.81
d1wa5b_ 503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 97.18
d1xm9a1 457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 97.07
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 96.96
d1xm9a1 457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 96.95
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 96.08
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.93
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 95.71
d1wa5b_ 503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 95.48
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 86.72
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91  E-value=8.9e-06  Score=59.68  Aligned_cols=113  Identities=17%  Similarity=0.180  Sum_probs=86.4

Q ss_pred             hhhHHHHHHHHHHHhHhhCCCc--ccCCCCCCcchHhhHhhcCCCCchhhhhHHHHHHHhhcCCChHHHHHHHHccchhh
Q psy4701           4 VKGKRQAAQGLARLGITLNPEV--AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRILKEKGPLE   81 (124)
Q Consensus         4 ~~~~~~A~qaLAkilIs~nP~l--~F~~~~~~~~v~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~G~s~   81 (124)
                      +..|..|+.+|+++. ..||..  .+.   ...+|++|+.+|.++.+..-..+++-||.||++.+++.++.++..+|+..
T Consensus        73 ~~vr~~A~~~L~~l~-~~~~~~~~~~~---~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~  148 (264)
T d1xqra1          73 AGLRWRAAQLIGTCS-QNVAAIQEQVL---GLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSV  148 (264)
T ss_dssp             HHHHHHHHHHHHHHH-TTCHHHHHHHH---HTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHH---HcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhH
Confidence            356889999999977 355542  222   13589999999976666677889999999999999988888888788766


Q ss_pred             hhhhhhc----------------------------cchHHHHHHHHhCCcchHHHHHHHHHHHHHhh
Q psy4701          82 VGSSIMA----------------------------KEGILEMVLVMANTEDILQQKVACECIIAVAS  120 (124)
Q Consensus        82 IEnlLls----------------------------~n~~Lqral~M~~S~d~~~Q~~a~e~ii~a~s  120 (124)
                      +-+++-+                            +.+.++.++.++.++|...|..++.+|.+-+.
T Consensus       149 L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~  215 (264)
T d1xqra1         149 LMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT  215 (264)
T ss_dssp             HHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred             HHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence            6655544                            34467777888888888888888888876654



>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure