Psyllid ID: psy4706


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
MGNNNNNRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
ccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHcccccccccccccccccHHEEHHHHHHHHHHHcccc
ccccccccEEccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHcHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEccccEEEEEEEcccc
mgnnnnnrllsgRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYkyessmeiteDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDkllspdieskVRVTVAITCLLLASLVslegsaprsrvrfppranfvlnrRTCQVYLIVAGELI
mgnnnnnrllsgRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLvslegsaprsrvrfppranfvlnrrtCQVYLIVAGELI
MGnnnnnRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
*************DAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAG***
******N*LLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKY**SMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
MGNNNNNRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
******NRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLE*SAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGNNNNNRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVRFPPRANFVLNRRTCQVYLIVAGELI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query163 2.2.26 [Sep-21-2011]
Q9H3U1 944 Protein unc-45 homolog A yes N/A 0.662 0.114 0.245 9e-05
Q5RAP0 929 Protein unc-45 homolog A yes N/A 0.662 0.116 0.245 0.0002
Q6DGE9 934 Protein unc-45 homolog B yes N/A 0.662 0.115 0.228 0.0005
Q99KD5 944 Protein unc-45 homolog A yes N/A 0.662 0.114 0.236 0.0007
>sp|Q9H3U1|UN45A_HUMAN Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1 Back     alignment and function desciption
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 12  GRDAIIQLITRNVHYKAINWAERLIEI----RGLQRLMEVASELQEYKYESSMEITEDTH 67
           GRD  + L+ + V  K++      + +    +GL++++EV   LQ+   E  + +T ++ 
Sbjct: 311 GRDNALTLLIKAVPRKSLKDPNNSLTLWVIDQGLKKILEVGGSLQDPPGE--LAVTANSR 368

Query: 68  TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
             AS+ L+++F+++  D  RE +      +IK       +  K+R    ++CLL
Sbjct: 369 MSASILLSKLFDDLKCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLL 422




Acts as co-chaperone for HSP90. Prevents the stimulation of HSP90AB1 ATPase activity by AHSA1. Positive factor in promoting PGR function in the cell. May be necessary for proper folding of myosin (Potential). Necessary for normal cell proliferation. Necessary for normal myotube formation and myosin accumulation during muscle cell development. May play a role in erythropoiesis in stroma cells in the spleen.
Homo sapiens (taxid: 9606)
>sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1 Back     alignment and function description
>sp|Q6DGE9|UN45B_DANRE Protein unc-45 homolog B OS=Danio rerio GN=unc45b PE=1 SV=2 Back     alignment and function description
>sp|Q99KD5|UN45A_MOUSE Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query163
307188554 939 UNC45-like protein A [Camponotus florida 0.730 0.126 0.702 2e-43
332024716 939 Protein unc-45-like protein A [Acromyrme 0.730 0.126 0.702 4e-43
195111867 954 GI10261 [Drosophila mojavensis] gi|19391 0.730 0.124 0.702 6e-43
345492367 946 PREDICTED: protein unc-45 homolog B-like 0.699 0.120 0.719 1e-42
195451276 949 GK13474 [Drosophila willistoni] gi|19416 0.736 0.126 0.704 1e-42
307192485 942 UNC45-like protein A [Harpegnathos salta 0.730 0.126 0.677 2e-42
322791268 934 hypothetical protein SINV_07157 [Solenop 0.730 0.127 0.677 4e-42
183979249 943 similar to CG2708-PA [Papilio xuthus] 0.730 0.126 0.694 4e-42
383850080 940 PREDICTED: protein unc-45 homolog B-like 0.730 0.126 0.685 6e-42
157127851 448 heat shock protein 70 (hsp70)-interactin 0.779 0.283 0.671 1e-41
>gi|307188554|gb|EFN73289.1| UNC45-like protein A [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 104/121 (85%), Gaps = 2/121 (1%)

Query: 7   NRLLSG--RDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITE 64
           NR +SG  RDAII+LI RN+HY A++WAERL+E+RGLQ+LMEVASE++EYKYESSM+IT 
Sbjct: 292 NRTISGLARDAIIELIMRNIHYTALDWAERLVELRGLQKLMEVASEMEEYKYESSMDITS 351

Query: 65  DTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLAS 124
            T T+ S+CLARI+ENMYYD A+ER+  +I EFIKDKLL+PDIESKVR+ VAIT LLL  
Sbjct: 352 STRTITSVCLARIYENMYYDAAKERFRNAIDEFIKDKLLTPDIESKVRIVVAITTLLLGP 411

Query: 125 L 125
           L
Sbjct: 412 L 412




Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024716|gb|EGI64905.1| Protein unc-45-like protein A [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|195111867|ref|XP_002000498.1| GI10261 [Drosophila mojavensis] gi|193917092|gb|EDW15959.1| GI10261 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|345492367|ref|XP_001600626.2| PREDICTED: protein unc-45 homolog B-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195451276|ref|XP_002072843.1| GK13474 [Drosophila willistoni] gi|194168928|gb|EDW83829.1| GK13474 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|307192485|gb|EFN75678.1| UNC45-like protein A [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322791268|gb|EFZ15792.1| hypothetical protein SINV_07157 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|183979249|dbj|BAG30786.1| similar to CG2708-PA [Papilio xuthus] Back     alignment and taxonomy information
>gi|383850080|ref|XP_003700645.1| PREDICTED: protein unc-45 homolog B-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|157127851|ref|XP_001661211.1| heat shock protein 70 (hsp70)-interacting protein [Aedes aegypti] gi|108872793|gb|EAT37018.1| AAEL010948-PA [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query163
FB|FBgn0010812 947 unc-45 [Drosophila melanogaste 0.699 0.120 0.672 4e-37
ZFIN|ZDB-GENE-050417-158 935 unc45a "unc-45 homolog A (C. e 0.668 0.116 0.252 8.2e-08
ZFIN|ZDB-GENE-020919-3 934 unc45b "unc-45 homolog B (C. e 0.662 0.115 0.228 7.3e-05
MGI|MGI:2443377 931 Unc45b "unc-45 homolog B (C. e 0.662 0.116 0.236 0.0003
UNIPROTKB|Q8IWX7 931 UNC45B "Protein unc-45 homolog 0.662 0.116 0.236 0.00049
UNIPROTKB|Q9H3U1 944 UNC45A "Protein unc-45 homolog 0.662 0.114 0.245 0.0005
UNIPROTKB|F1PUV3 943 UNC45B "Uncharacterized protei 0.662 0.114 0.245 0.0007
UNIPROTKB|F1S166 929 UNC45B "Uncharacterized protei 0.662 0.116 0.245 0.00095
FB|FBgn0010812 unc-45 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 409 (149.0 bits), Expect = 4.0e-37, P = 4.0e-37
 Identities = 78/116 (67%), Positives = 100/116 (86%)

Query:     8 RLLSG--RDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITED 65
             R +SG  RD +I+LITRNVHY A+ WAERL+EIRGL RL++V SEL++YKYES+M+IT  
Sbjct:   297 RTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGS 356

Query:    66 THTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
             + T+AS+CLARI+ENMYYD+A+ R+ + I E+IKDKLL+PD+ESKVRVTVAIT LL
Sbjct:   357 SSTIASVCLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALL 412




GO:0061077 "chaperone-mediated protein folding" evidence=IDA
GO:0034605 "cellular response to heat" evidence=IDA
GO:0007525 "somatic muscle development" evidence=IMP
GO:0031034 "myosin filament assembly" evidence=IMP
ZFIN|ZDB-GENE-050417-158 unc45a "unc-45 homolog A (C. elegans)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020919-3 unc45b "unc-45 homolog B (C. elegans)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2443377 Unc45b "unc-45 homolog B (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IWX7 UNC45B "Protein unc-45 homolog B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H3U1 UNC45A "Protein unc-45 homolog A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PUV3 UNC45B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S166 UNC45B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query163
pfam11701155 pfam11701, UNC45-central, Myosin-binding striated 1e-05
>gnl|CDD|221172 pfam11701, UNC45-central, Myosin-binding striated muscle assembly central Back     alignment and domain information
 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 59  SMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAIT 118
            + +TE+  +LA L L++       D A+E + E I EFI+  +   +++S +    A+T
Sbjct: 14  PLRVTEEVRSLALLILSK-----LLDAAKENFTEVISEFIESLIDEGEVDSLINAVSALT 68

Query: 119 CLL 121
            L 
Sbjct: 69  ALF 71


The UNC-45 or small muscle protein 1 of C.elegans is expressed in two forms from different genomic positions in mammals, as a general tissue protein UNC-45a and a specific form Unc-45b expressed only in striated and skeletal muscle. All members carry up to three amino-terminal tetratricopeptide repeat (TPR) domains towards their N-terminal, a UCS domain at the C-terminal that contains a number of Arm repeats pfam00514 and this central region of approximately 400 residues. Both the general form and the muscle form of UNC-45 function in myotube formation through cell fusion. Myofibril formation requires both GC and SM UNC-45, consistent with the fact that the cytoskeleton is necessary for the development and maintenance of organised myofibrils. The S. pombe Rng3p, is crucial for cell shape, normal actin cytoskeleton, and contractile ring assembly, and is essential for assembly of the myosin II-containing progenitors of the contractile ring. Widespread defects in the cytoskeleton are found in null mutants of all three fungal proteins. Mammalian Unc45 is found to act as a specific chaperone during the folding of myosin and the assembly of striated muscle by forming a stable complex with the general chaperone Hsp90. The exact function of this central region is not known. Length = 155

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 163
PF11701157 UNC45-central: Myosin-binding striated muscle asse 99.81
KOG4151|consensus 748 99.46
KOG2758|consensus432 93.2
>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle Back     alignment and domain information
Probab=99.81  E-value=5e-20  Score=144.44  Aligned_cols=97  Identities=16%  Similarity=0.202  Sum_probs=91.3

Q ss_pred             ccCCcchhHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHhhhhhhhhhcccCCCCccc-
Q psy4706          60 MEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVR-  138 (163)
Q Consensus        60 lpvT~nTRm~aSV~LskLYDdm~~D~~Re~F~~~ce~fik~~~~~~d~eskvrai~~is~LLqGP~DVGn~~l~~~gv~-  138 (163)
                      ++.|+|||++++|||+|+.     |.+|+.|++.|++||++++.++++++++++++++++|++||.|+|+.++..+|++ 
T Consensus        15 ~~~~~~~r~~a~v~l~k~l-----~~~~~~~~~~~~~~i~~~~~~~~~d~~i~~~~~l~~lfp~~~dv~~~l~~~eg~~~   89 (157)
T PF11701_consen   15 LRQPEEVRSHALVILSKLL-----DAAREEFKEKISDFIESLLDEGEMDSLIIAFSALTALFPGPPDVGSELFLSEGFLE   89 (157)
T ss_dssp             TTTSCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCTTTHHHHHHHCCTTTHHH
T ss_pred             cCCCHhHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHhCCCHHHHHHHHhhhhHHH
Confidence            4889999999999999993     9999999999999999999999999999999999999999999999999999997 


Q ss_pred             ----cCC--chhHHHHHHHHHHHHHHhcc
Q psy4706         139 ----FPP--RANFVLNRRTCQVYLIVAGE  161 (163)
Q Consensus       139 ----~~~--s~~~~~q~va~ea~i~aa~k  161 (163)
                          ++.  +.+...|.+++|+++||+.+
T Consensus        90 ~l~~~~~~~~~~~~~~~~~lell~aAc~d  118 (157)
T PF11701_consen   90 SLLPLASRKSKDRKVQKAALELLSAACID  118 (157)
T ss_dssp             HHHHHHH-CTS-HHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHhcccCCHHHHHHHHHHHHHHHcc
Confidence                556  89999999999999999875



Myofibril formation requires both UNC-45 forms, consistent with the fact that the cytoskeleton is necessary for the development and maintenance of organised myofibrils []. Rng3 (Ring assembly protein 3), the homologue in Schizosaccharomyces pombe, is crucial for cell shape, normal actin cytoskeleton, and contractile ring assembly, and is essential for assembly of the myosin II-containing progenitors of the contractile ring. Widespread defects in the cytoskeleton are found in null mutants of all three fungal proteins []. Mammalian Unc45 is found to act as a specific chaperone during the folding of myosin and the assembly of striated muscle by forming a stable complex with the general chaperone Hsp90 []. All members carry up to three amino-terminal tetratricopeptide repeat (TPR) and a UCS domain at the C terminus that contains a number of Arm repeats. ; PDB: 3OPB_A 3NOW_A.

>KOG4151|consensus Back     alignment and domain information
>KOG2758|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query163
3now_A 810 Unc-45 From Drosophila Melanogaster Length = 810 2e-42
>pdb|3NOW|A Chain A, Unc-45 From Drosophila Melanogaster Length = 810 Back     alignment and structure

Iteration: 1

Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 79/120 (65%), Positives = 101/120 (84%), Gaps = 2/120 (1%) Query: 8 RLLSG--RDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITED 65 R +SG RD +I+LITRNVHY A+ WAERL+EIRGL RL++V SEL++YKYES+M+IT Sbjct: 160 RTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGS 219 Query: 66 THTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASL 125 + T+AS+CLARI+ENMYYD+A+ R+ + I E+IKDKLL+PD+ESKVRVTVAIT LL L Sbjct: 220 SSTIASVCLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPL 279

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query163
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 6e-30
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure
 Score =  113 bits (283), Expect = 6e-30
 Identities = 75/113 (66%), Positives = 97/113 (85%)

Query: 11  SGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLA 70
           + RD +I+LITRNVHY A+ WAERL+EIRGL RL++V SEL++YKYES+M+IT  + T+A
Sbjct: 165 AARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIA 224

Query: 71  SLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLA 123
           S+CLARI+ENMYYD+A+ R+ + I E+IKDKLL+PD+ESKVRVTVAIT LL  
Sbjct: 225 SVCLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNG 277


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query163
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 100.0
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 89.66
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 82.46
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 81.69
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 80.54
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
Probab=100.00  E-value=5.4e-47  Score=357.75  Aligned_cols=158  Identities=50%  Similarity=0.819  Sum_probs=153.7

Q ss_pred             CCCCCCcchhHHHHHHHHHhhcccccchHHHHHHHHhHHHHHHhhhccccccccCcccCCcchhHHHHHHHHHHHhhhhc
Q psy4706           4 NNNNRLLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYY   83 (163)
Q Consensus         4 ~~~~vSg~gRD~~i~LL~KnVp~~~~~~~~~~~~~~GLkrLLeVa~~~~e~~~~~~lpvT~nTRm~aSV~LskLYDdm~~   83 (163)
                      .+.+|||+|||+|||||+|||||++++|+++|++.+||+|||+|||++|||||+++||||+||||||||||+||||||+|
T Consensus       158 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~  237 (810)
T 3now_A          158 TDRTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYY  237 (810)
T ss_dssp             TCTTSCHHHHHHHHHHHHHHTTCTTTTHHHHHHHTTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCS
T ss_pred             hccccChhhHHHHHHHHHHhCCccccccccchhhHhhHHHHHHHHhcCccccccccCCCChhHHHHHHHHHHHHHHHhcc
Confidence            46789999999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHhhhhhhhhhcccCCCCccc-----cCCchhHHHHHHHHHHHHHH
Q psy4706          84 DQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVR-----FPPRANFVLNRRTCQVYLIV  158 (163)
Q Consensus        84 D~~Re~F~~~ce~fik~~~~~~d~eskvrai~~is~LLqGP~DVGn~~l~~~gv~-----~~~s~~~~~q~va~ea~i~a  158 (163)
                      |++||+|+++|++||++||.++++++|++|++++|++++||+|+|+.++..+|++     ++.|++...|+.|+|++.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~a  317 (810)
T 3now_A          238 DEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAA  317 (810)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998     66999999999999999999


Q ss_pred             hcc
Q psy4706         159 AGE  161 (163)
Q Consensus       159 a~k  161 (163)
                      |++
T Consensus       318 a~~  320 (810)
T 3now_A          318 SSK  320 (810)
T ss_dssp             TTS
T ss_pred             cCC
Confidence            985



>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query163
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 90.96
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 82.09
d1b3ua_588 Constant regulatory domain of protein phosphatase 80.2
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.96  E-value=0.49  Score=34.77  Aligned_cols=132  Identities=14%  Similarity=0.147  Sum_probs=84.8

Q ss_pred             hhHHHHHHHHHhhcccccchHHHHHHHHhHHHHHHhhhccccccccCcccCCcchhHHHHHHHHHHHhhhhccHHHHHHH
Q psy4706          12 GRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYL   91 (163)
Q Consensus        12 gRD~~i~LL~KnVp~~~~~~~~~~~~~~GLkrLLeVa~~~~e~~~~~~lpvT~nTRm~aSV~LskLYDdm~~D~~Re~F~   91 (163)
                      .|..+++.|..-+  .+.+|+..+..++|+.-|+...-+.+          .++.|..|+-+|.++-.+--  .-+..+.
T Consensus        33 ~~~~Al~~L~~L~--~~~d~a~~l~~~gg~~~ll~~ll~s~----------~~~vr~~A~~~L~~l~~~~~--~~~~~~~   98 (264)
T d1xqra1          33 EREGALELLADLC--ENMDNAADFCQLSGMHLLVGRYLEAG----------AAGLRWRAAQLIGTCSQNVA--AIQEQVL   98 (264)
T ss_dssp             HHHHHHHHHHHHH--TSHHHHHHHHHTTHHHHHHHTTTTCS----------SHHHHHHHHHHHHHHHTTCH--HHHHHHH
T ss_pred             HHHHHHHHHHHHH--cCHHHHHHHHHcCCHHHHHHHHhCCC----------CHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence            4566787777776  45678888888899998877554332          24679999999999875322  1133332


Q ss_pred             --HHHHHHHHhhc-CCCCcchhHHHHHHHHHhhhhhhhhhcccCCCCccc----cCCchhHHHHHHHHHHHHHH
Q psy4706          92 --ESIMEFIKDKL-LSPDIESKVRVTVAITCLLLASLVSLEGSAPRSRVR----FPPRANFVLNRRTCQVYLIV  158 (163)
Q Consensus        92 --~~ce~fik~~~-~~~d~eskvrai~~is~LLqGP~DVGn~~l~~~gv~----~~~s~~~~~q~va~ea~i~a  158 (163)
                        ..+.-.++ .+ ..++.+.+.+++.+++.|..+--+.-..++...|+-    +..|.+...|..|+.++-+.
T Consensus        99 ~~~~i~~Lv~-lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l  171 (264)
T d1xqra1          99 GLGALRKLLR-LLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNL  171 (264)
T ss_dssp             HTTHHHHHHH-HHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred             HcCchHHHHH-HhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHH
Confidence              22334443 44 466778889999999999876554433333333322    33666777788888777653



>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure