Psyllid ID: psy4884

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MTKVNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKRP
Secondary Structure (PSIPRED)
cccccEEHHHHHHccccccccccccccccccEEEcEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHccccccccEEEccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEHEHHHHHccccccccccccHHHcccHHHHHccHHHHcccccccccccccccccccEEEEEEHccccccEEEEEEcccccccccccccHHHccccccccccEEEEcc
Coil and Loop (DISEMBL)
MTKVNVFHLVICLDLlsfiptcypvedttekvigpldyenipseefwgteprRLINKYYSkhhdvvtdrftidtgiHTEAICrcwkskkfpfcdnshkyhnkfhkdnvgpltlkrp
Flexible Loop (DISEMBL)
MTKVNVFHLVICLDLLSFIPTCYPVEDTTEKVigpldyenipseefwgtePRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHkyhnkfhkdnvgpltlkrp
Low Complexity Region (SEG)
MTKVNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKRP
Disordered region (IsUnstruct)
***VNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFH************
Disordered Region (DISOPRED)
******FHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEE************YYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLK**
Disordered Region (DISEMBL)
MTKVNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKRP
Disordered Region (DISPRO)
*TKVNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKRP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTKVNVFHLVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKRP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
B4K5X8	131	CDGSH iron-sulfur domain-	N/A	N/A	0.818	0.725	0.368	4e-10
B4MBU8	133	CDGSH iron-sulfur domain-	N/A	N/A	0.534	0.466	0.451	6e-10
C1C524	135	CDGSH iron-sulfur domain-	N/A	N/A	0.534	0.459	0.492	6e-10
B3M1H7	134	CDGSH iron-sulfur domain-	N/A	N/A	0.517	0.447	0.45	7e-10
Q6PCF8	135	CDGSH iron-sulfur domain-	N/A	N/A	0.534	0.459	0.476	8e-10
Q5I027	135	CDGSH iron-sulfur domain-	yes	N/A	0.534	0.459	0.476	8e-10
Q6AZG1	135	CDGSH iron-sulfur domain-	N/A	N/A	0.534	0.459	0.476	9e-10
Q8N5K1	135	CDGSH iron-sulfur domain-	yes	N/A	0.534	0.459	0.476	1e-09
Q05B71	135	CDGSH iron-sulfur domain-	yes	N/A	0.534	0.459	0.476	1e-09
Q9CQB5	135	CDGSH iron-sulfur domain-	yes	N/A	0.534	0.459	0.476	2e-09

>sp|B4K5X8|CISD2_DROMO CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila mojavensis GN=GI10402 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 14  DLLSFIPTCYPVEDTTEKVIGPLDYENI-PSEEFWGTEPRRLINKYYSKHHDVVTDRFTI 72
           D L+ IP    V       IG + Y+ + P+ +      R   N    KH   V D   I
Sbjct: 35  DWLALIPPTAVVVG-----IGYISYQALCPAAQRKSCSGR--CNDNIRKHEAKVVDMIDI 87

Query: 73  DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR 115
           +      A CRCWK+K +P+CD SH  HNK   DNVGP+ +KR
Sbjct: 88  ENIADKAAFCRCWKTKNWPYCDGSHGEHNKNTGDNVGPVVIKR 130

Drosophila mojavensis (taxid: 7230)

>sp|B4MBU8|CISD2_DROVI CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila virilis GN=GJ14516 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 36/62 (58%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           L N+   KH   V D   I+      A CRCWK+K +P+CD SH  HNK   DNVGP+ +
Sbjct: 71  LCNENVRKHEAKVVDMIDIENIADKAAFCRCWKTKNWPYCDGSHAAHNKDTGDNVGPIVI 130

Query: 114 KR 115
           K+
Sbjct: 131 KK 132

Drosophila virilis (taxid: 7244)

>sp|C1C524|CISD2_LITCT CDGSH iron-sulfur domain-containing protein 2 OS=Lithobates catesbeiana GN=cisd2 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  I   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEIDIEDLRIAKVAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Lithobates catesbeiana (taxid: 8400)

>sp|B3M1H7|CISD2_DROAN CDGSH iron-sulfur domain-containing protein 2 homolog OS=Drosophila ananassae GN=GF16608 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%)

Query: 56  NKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR 115
           N    KH   V D   ++      A CRCWKSK +P+CD SH  HNK   DNVGP+ +K+
Sbjct: 74  NNQIRKHEPKVVDTIDVEDIADKAAFCRCWKSKNWPYCDGSHGEHNKLTGDNVGPVVVKK 133

Drosophila ananassae (taxid: 7217)

>sp|Q6PCF8|CID2A_XENLA CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis GN=cisd2-a PE=2 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus laevis (taxid: 8355)

>sp|Q5I027|CISD2_XENTR CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus tropicalis (taxid: 8364)

>sp|Q6AZG1|CID2B_XENLA CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2 SV=1

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize becn1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy.

Xenopus laevis (taxid: 8355)

>sp|Q8N5K1|CISD2_HUMAN CDGSH iron-sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Homo sapiens (taxid: 9606)

>sp|Q05B71|CISD2_BOVIN CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Bos taurus (taxid: 9913)

>sp|Q9CQB5|CISD2_MOUSE CDGSH iron-sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Regulator of autophagy that contributes to antagonize BECN1-mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of BCL2 with BECN1 and is required for BCL2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy. Contributes to BIK-initiated autophagy, while it is not involved in BIK-dependent activation of caspases. Involved in life span control, probably via its function as regulator of autophagy.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
221102302	103	PREDICTED: CDGSH iron-sulfur domain-cont	0.706	0.796	0.411	1e-09
50746903	134	PREDICTED: CDGSH iron-sulfur domain-cont	0.534	0.462	0.483	4e-09
449265881	115	CDGSH iron sulfur domain-containing prot	0.534	0.539	0.483	5e-09
387015102	135	CDGSH iron-sulfur domain-containing prot	0.534	0.459	0.476	1e-08
91091768	130	PREDICTED: similar to CG1458 CG1458-PA [	0.534	0.476	0.483	1e-08
344277517	135	PREDICTED: CDGSH iron-sulfur domain-cont	0.534	0.459	0.476	2e-08
195112386	131	GI10402 [Drosophila mojavensis] gi|29046	0.818	0.725	0.368	2e-08
225706718	108	Zinc finger CDGSH domain-containing prot	0.698	0.75	0.392	2e-08
240849339	124	CDGSH iron-sulfur domain-containing prot	0.577	0.540	0.417	2e-08
195399990	133	GJ14516 [Drosophila virilis] gi|29046317	0.534	0.466	0.451	3e-08

>gi|221102302|ref|XP_002154650.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Hydra magnipapillata]

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 34  GPLDY--ENIPSEEFWG-TEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKF 90
           G L Y   NI   +  G T+P+ +IN    K    V   + I+    + A CRCWKS KF
Sbjct: 18  GVLSYVISNIVLPKLQGKTQPKDVINDSIEKDKAKVVHSYDIEDINESTAFCRCWKSSKF 77

Query: 91  PFCDNSHKYHNKFHKDNVGPLTLKR 115
           P+CD +H  HNK   DNVGP+ L +
Sbjct: 78  PYCDGTHNAHNKLSGDNVGPVLLNK 102

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|50746903|ref|XP_420668.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2 [Gallus gallus] gi|326919081|ref|XP_003205812.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like [Meleagris gallopavo]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           LIN    K +  V +   I+    T+A CRCW+SK FP CD SH  HN+   DNVGPL L
Sbjct: 70  LINLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 129

Query: 114 KR 115
           K+
Sbjct: 130 KK 131

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449265881|gb|EMC77011.1| CDGSH iron sulfur domain-containing protein 2, partial [Columba livia]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           LIN    K +  V +   I+    T+A CRCW+SK FP CD SH  HN+   DNVGPL L
Sbjct: 51  LINLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 110

Query: 114 KR 115
           K+
Sbjct: 111 KK 112

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|387015102|gb|AFJ49670.1| CDGSH iron-sulfur domain-containing protein 2-like [Crotalus adamanteus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAI-CRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I+   HT+A+ CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLCHTKAVYCRCWRSKTFPVCDGSHNKHNESTGDNVGPLI 129

Query: 113 LKR 115
           L++
Sbjct: 130 LRK 132

Source: Crotalus adamanteus

Species: Crotalus adamanteus

Genus: Crotalus

Family: Viperidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|91091768|ref|XP_969459.1| PREDICTED: similar to CG1458 CG1458-PA [Tribolium castaneum] gi|270001086|gb|EEZ97533.1| hypothetical protein TcasGA2_TC011381 [Tribolium castaneum]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           LINK   K +  V D   I+      A CRCWKSK +P+CD +H  HNK   DNVGP+ +
Sbjct: 68  LINKSVLKSNPKVVDTVDIEDISEKAAFCRCWKSKNWPYCDGAHGTHNKETGDNVGPVVV 127

Query: 114 KR 115
           KR
Sbjct: 128 KR 129

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344277517|ref|XP_003410547.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like [Loxodonta africana]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 70  LINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query: 113 LKR 115
           LK+
Sbjct: 130 LKK 132

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195112386|ref|XP_002000754.1| GI10402 [Drosophila mojavensis] gi|290463170|sp|B4K5X8.1|CISD2_DROMO RecName: Full=CDGSH iron-sulfur domain-containing protein 2 homolog gi|193917348|gb|EDW16215.1| GI10402 [Drosophila mojavensis]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 14  DLLSFIPTCYPVEDTTEKVIGPLDYENI-PSEEFWGTEPRRLINKYYSKHHDVVTDRFTI 72
           D L+ IP    V       IG + Y+ + P+ +      R   N    KH   V D   I
Sbjct: 35  DWLALIPPTAVVVG-----IGYISYQALCPAAQRKSCSGR--CNDNIRKHEAKVVDMIDI 87

Query: 73  DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR 115
           +      A CRCWK+K +P+CD SH  HNK   DNVGP+ +KR
Sbjct: 88  ENIADKAAFCRCWKTKNWPYCDGSHGEHNKNTGDNVGPVVIKR 130

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|225706718|gb|ACO09205.1| Zinc finger CDGSH domain-containing protein 1 [Osmerus mordax]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 32  VIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFP 91
            IG L ++ + S+   G +P+  +N+   K +  V   F I+        CRCW+SKKFP
Sbjct: 25  AIGILLFQKLFSKG-KGVKPK--VNQELQKDNPKVVHAFDIEDLGDKAVYCRCWRSKKFP 81

Query: 92  FCDNSHKYHNKFHKDNVGPLTLKR 115
           +CD +H  HN+   DNVGPL +KR
Sbjct: 82  YCDGAHAKHNQETGDNVGPLIIKR 105

Source: Osmerus mordax

Species: Osmerus mordax

Genus: Osmerus

Family: Osmeridae

Order: Osmeriformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|240849339|ref|NP_001155583.1| CDGSH iron-sulfur domain-containing protein-like [Acyrthosiphon pisum] gi|239788799|dbj|BAH71062.1| ACYPI004745 [Acyrthosiphon pisum] gi|239788801|dbj|BAH71063.1| ACYPI004745 [Acyrthosiphon pisum]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%)

Query: 49  TEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNV 108
            +PR  +N    K    V D + I+    + A CRCW+S KFP CD +H  +N   KDNV
Sbjct: 57  VKPRHPVNPCIKKESPKVVDGYDIEELGESTAFCRCWRSSKFPLCDGAHNKYNIEQKDNV 116

Query: 109 GPLTLKR 115
           GPL +K+
Sbjct: 117 GPLIIKK 123

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399990|ref|XP_002058601.1| GJ14516 [Drosophila virilis] gi|290463174|sp|B4MBU8.1|CISD2_DROVI RecName: Full=CDGSH iron-sulfur domain-containing protein 2 homolog gi|194142161|gb|EDW58569.1| GJ14516 [Drosophila virilis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 36/62 (58%)

Query: 54  LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           L N+   KH   V D   I+      A CRCWK+K +P+CD SH  HNK   DNVGP+ +
Sbjct: 71  LCNENVRKHEAKVVDMIDIENIADKAAFCRCWKTKNWPYCDGSHAAHNKDTGDNVGPIVI 130

Query: 114 KR 115
           K+
Sbjct: 131 KK 132

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
UNIPROTKB|F1NBE2	137	CISD2 "Uncharacterized protein	0.534	0.452	0.483	1.3e-11
UNIPROTKB|F1PNJ5	103	CISD1 "Uncharacterized protein	0.543	0.611	0.430	5.8e-11
UNIPROTKB|C1C524	135	cisd2 "CDGSH iron-sulfur domai	0.534	0.459	0.492	7.4e-11
UNIPROTKB|Q5I027	135	cisd2 "CDGSH iron-sulfur domai	0.534	0.459	0.476	7.4e-11
UNIPROTKB|Q6AZG1	135	cisd2-b "CDGSH iron-sulfur dom	0.534	0.459	0.476	7.4e-11
UNIPROTKB|Q6PCF8	135	cisd2-a "CDGSH iron-sulfur dom	0.534	0.459	0.476	7.4e-11
RGD|1309529	108	Cisd1 "CDGSH iron sulfur domai	0.681	0.731	0.369	7.4e-11
UNIPROTKB|Q9NZ45	108	CISD1 "CDGSH iron-sulfur domai	0.543	0.583	0.415	9.4e-11
MGI|MGI:1261855	108	Cisd1 "CDGSH iron sulfur domai	0.681	0.731	0.369	9.4e-11
ZFIN|ZDB-GENE-050327-15	121	zgc:110843 "zgc:110843" [Danio	0.568	0.545	0.411	9.4e-11

UNIPROTKB|F1NBE2 CISD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query:    54 LINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
             LIN    K +  V +   I+    T+A CRCW+SK FP CD SH  HN+   DNVGPL L
Sbjct:    73 LINLKIQKENPKVVNEINIEDLCLTKAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 132

Query:   114 KR 115
             K+
Sbjct:   133 KK 134

GO:0000422 "mitochondrion degradation" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

UNIPROTKB|F1PNJ5 CISD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 28/65 (43%), Positives = 40/65 (61%)

Query:    52 RRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGP 110
             + ++N +  K +  +   + + D G  T   CRCW+SKKFPFCD SH  HN+   DNVGP
Sbjct:    37 KSMVNLHIQKDNPKIVHAYDMEDLGDKT-VYCRCWRSKKFPFCDGSHTKHNEETGDNVGP 95

Query:   111 LTLKR 115
             L +K+
Sbjct:    96 LIIKK 100

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|C1C524 cisd2 "CDGSH iron-sulfur domain-containing protein 2" [Rana catesbeiana (taxid:8400)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 31/63 (49%), Positives = 36/63 (57%)

Query:    54 LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
             LIN    K +  V +   I D  I   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct:    70 LINLKIQKENPKVVNEIDIEDLRIAKVAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query:   113 LKR 115
             LK+
Sbjct:   130 LKK 132

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q5I027 cisd2 "CDGSH iron-sulfur domain-containing protein 2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 30/63 (47%), Positives = 36/63 (57%)

Query:    54 LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
             LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct:    70 LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query:   113 LKR 115
             LK+
Sbjct:   130 LKK 132

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q6AZG1 cisd2-b "CDGSH iron-sulfur domain-containing protein 2B" [Xenopus laevis (taxid:8355)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 30/63 (47%), Positives = 36/63 (57%)

Query:    54 LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
             LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct:    70 LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query:   113 LKR 115
             LK+
Sbjct:   130 LKK 132

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

UNIPROTKB|Q6PCF8 cisd2-a "CDGSH iron-sulfur domain-containing protein 2A" [Xenopus laevis (taxid:8355)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 30/63 (47%), Positives = 36/63 (57%)

Query:    54 LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
             LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct:    70 LINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLI 129

Query:   113 LKR 115
             LK+
Sbjct:   130 LKK 132

GO:0000422 "mitochondrion degradation" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0010259 "multicellular organismal aging" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS

RGD|1309529 Cisd1 "CDGSH iron sulfur domain 1" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 31/84 (36%), Positives = 50/84 (59%)

Query:    33 IGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAI-CRCWKSKKFP 91
             +G L Y+   ++E   +  + ++N    K +  V   F ++  +  +A+ CRCW+SKKFP
Sbjct:    26 LGYLAYKKFYAKE---SRTKAMVNLQIQKDNPKVVHAFDMED-LGDKAVYCRCWRSKKFP 81

Query:    92 FCDNSHKYHNKFHKDNVGPLTLKR 115
             FCD +H  HN+   DNVGPL +K+
Sbjct:    82 FCDGAHIKHNEETGDNVGPLIIKK 105

GO:0005739 "mitochondrion" evidence=ISO

GO:0005741 "mitochondrial outer membrane" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

UNIPROTKB|Q9NZ45 CISD1 "CDGSH iron-sulfur domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 27/65 (41%), Positives = 42/65 (64%)

Query:    52 RRLINKYYSKHHDVVTDRFTIDTGIHTEAI-CRCWKSKKFPFCDNSHKYHNKFHKDNVGP 110
             + +IN +  K +  +   F ++  +  +A+ CRCW+SKKFPFCD +H  HN+   DNVGP
Sbjct:    42 KAMINLHIQKDNPKIVHAFDMED-LGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 100

Query:   111 LTLKR 115
             L +K+
Sbjct:   101 LIIKK 105

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS

MGI|MGI:1261855 Cisd1 "CDGSH iron sulfur domain 1" [Mus musculus (taxid:10090)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 31/84 (36%), Positives = 49/84 (58%)

Query:    33 IGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAI-CRCWKSKKFP 91
             +G L Y+   ++E      + ++N    K +  V   F ++  +  +A+ CRCW+SKKFP
Sbjct:    26 LGYLAYKKFYAKE---NRTKAMVNLQIQKDNPKVVHAFDMED-LGDKAVYCRCWRSKKFP 81

Query:    92 FCDNSHKYHNKFHKDNVGPLTLKR 115
             FCD +H  HN+   DNVGPL +K+
Sbjct:    82 FCDGAHIKHNEETGDNVGPLIIKK 105

GO:0005506 "iron ion binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005741 "mitochondrial outer membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

ZFIN|ZDB-GENE-050327-15 zgc:110843 "zgc:110843" [Danio rerio (taxid:7955)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 28/68 (41%), Positives = 43/68 (63%)

Query:    49 TEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAI-CRCWKSKKFPFCDNSHKYHNKFHKDN 107
             + P+  +N   +K    V   F ++  I ++A+ CRCW+SKKFP+CD +H  HN+   DN
Sbjct:    52 SSPKSRVNLTINKDSPKVVHSFDMED-IGSKAVYCRCWRSKKFPYCDGAHAKHNEETGDN 110

Query:   108 VGPLTLKR 115
             VGPL +K+
Sbjct:   111 VGPLIIKK 118

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	116
smart00704	38	smart00704, ZnF_CDGSH, CDGSH-type zinc finger	8e-08
pfam09360	34	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGS	9e-08

>gnl|CDD|197836 smart00704, ZnF_CDGSH, CDGSH-type zinc finger

 Score = 44.6 bits (106), Expect = 8e-08
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 80  AICRCWKSKKFPFCDNSHKYHNK 102
           A+CRC +SK FP+CD SHK HN+
Sbjct: 15  ALCRCGRSKNFPYCDGSHKKHNE 37

Function unknown. Length = 38

>gnl|CDD|220203 pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type

 Score = 44.5 bits (106), Expect = 9e-08
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 80 AICRCWKSKKFPFCDNSHK 98
          A+CRC +SK  PFCD SHK
Sbjct: 16 ALCRCGRSKNQPFCDGSHK 34

The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm. Length = 34

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG3461|consensus	132		100.0
smart00704	38	ZnF_CDGSH CDGSH-type zinc finger. Function unknown	99.67
PF09360	38	zf-CDGSH: Iron-binding zinc finger CDGSH type; Int	99.57
COG3369	78	Zinc finger domain containing protein (CDGSH-type)	99.29
KOG4605|consensus	129		99.13
KOG4605|consensus	129		98.82
PF10660	64	MitoNEET_N: Iron-containing outer mitochondrial me	97.5

>KOG3461|consensus

Probab=100.00  E-value=3.4e-37  Score=230.00  Aligned_cols=98  Identities=39%  Similarity=0.724  Sum_probs=89.9

Q ss_pred             ehhhhhhhhccCceeeccccceeeeeeeeeeccCCCccccCCC--ccccccccccCCceeeeEEee-cCCCceEEEEeeC
Q psy4884           9 LVICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEP--RRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCW   85 (116)
Q Consensus         9 ~~~~~~~l~~~p~~~~~~~a~~a~~gy~~yk~i~~~~~~~~~~--~~~vN~~I~k~~pKvV~~~~i-d~~~~~~~lCrCg   85 (116)
                      +.-.+||+.++|+++   +|++|+++|++|+     +|+.+.+  ++++|++|||++||+||.|++ |++ ++.+|||||
T Consensus        29 ~~~~~~~~~v~~p~v---~~~ta~~~y~ay~-----r~~~k~~~n~a~iN~hIqkd~pKIVd~~d~eDl~-~ka~yCrCW   99 (132)
T KOG3461|consen   29 LGTVKDIAAVTPPCV---AAGTAATAYLAYK-----RFYVKDHQNKARINLHIQKDNPKIVDAFDMEDLG-DKAAYCRCW   99 (132)
T ss_pred             hccccchhhcCCcce---ecchhhhhhhhhe-----eeeeeecccCccccceeecCCCceeEEEehhhhc-ccceEEEee
Confidence            345689999999966   8899999999999     7777665  899999999999999999999 788 777799999


Q ss_pred             CCCCCccccccCccCccCCCCccCeeeeeC
Q psy4884          86 KSKKFPFCDNSHKYHNKFHKDNVGPLTLKR  115 (116)
Q Consensus        86 ~Sk~~PfCDGSH~~~~~etgdnvgPlii~~  115 (116)
                      +|+++|||||||.+||+++|||||||||||
T Consensus       100 rs~kfP~CDGsh~KhNk~tgdNvgpliikk  129 (132)
T KOG3461|consen  100 RSKKFPLCDGSHGKHNKETGDNVGPLIIKK  129 (132)
T ss_pred             ccCCcccccCcccccccccccccccceeee
Confidence            999999999999999999999999999997

>smart00704 ZnF_CDGSH CDGSH-type zinc finger

Probab=99.67  E-value=4.9e-17  Score=99.07  Aligned_cols=36  Identities=44%  Similarity=0.923  Sum_probs=30.6

Q ss_pred             eeEEeecCCCceEEEEeeCCCCCCccccccCccCccC
Q psy4884          67 TDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKF  103 (116)
Q Consensus        67 V~~~~id~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~e  103 (116)
                      +..|+++.+ ++++|||||+|+|+|||||||...+++
T Consensus         3 P~~~~~e~~-~~~~lC~C~~S~~~PfCDGsH~~~~~~   38 (38)
T smart00704        3 PDEVEVEKR-EKYALCRCGRSKNFPYCDGSHKKHNEQ   38 (38)
T ss_pred             CEEEEecCC-CEEEEeeCCCCCCCCccCCcccCcCcC
Confidence            456677765 889999999999999999999987763

Function unknown.

>PF09360 zf-CDGSH: Iron-binding zinc finger CDGSH type; InterPro: IPR018967 This entry represents iron-sulphur domain containing proteins that have a CDGSH sequence motif (although the Ser residue can also be an Ala or Thr), and is found in proteins from a wide range of organisms with the exception of fungi

Probab=99.57  E-value=1e-15  Score=93.00  Aligned_cols=37  Identities=41%  Similarity=0.653  Sum_probs=24.3

Q ss_pred             cCCceeeeEEeecCCCceEEEEeeCCCCCCccccccCc
Q psy4884          61 KHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHK   98 (116)
Q Consensus        61 k~~pKvV~~~~id~~~~~~~lCrCg~Sk~~PfCDGSH~   98 (116)
                      +++|.+++. +.++++++++|||||+|+|+|||||||+
T Consensus         2 ~~~P~~v~g-~~~~~~~~~~lC~Cg~S~~~PfCDGsH~   38 (38)
T PF09360_consen    2 DNGPYKVEG-DTELEKGTYALCRCGKSKNKPFCDGSHK   38 (38)
T ss_dssp             TTSSEEEEE-CGGCSTSEEEE-SSS--TTTTB--SHHH
T ss_pred             CCcCEEEEe-eEEecCCEEEEecCCCCCCCCccCCcCC
Confidence            356777765 3343448999999999999999999995

The CDGSH-type domain binds a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family []. CDGSH-type domains are found in mitoNEET, an iron-containing integral protein of the outer mitochondrian membrane (OMM). MitoNEET forms a dimeric structure with a NEET fold, and contains two domains: a beta-cap region and a cluster-binding domain that coordinated two acid-labile 2Fe-2S clusters (one bound to each protomer) []. The CDGSH iron-sulphur domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, (IPR019610 from INTERPRO) [, ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM. ; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 3TBO_A 3FNV_B 3TBM_B 3TBN_A 3S2R_A 3S2Q_A 3LPQ_A 2QH7_A 3EW0_A 2R13_A ....

>COG3369 Zinc finger domain containing protein (CDGSH-type) [Function unknown]

Probab=99.29  E-value=1.8e-12  Score=90.33  Aligned_cols=28  Identities=39%  Similarity=0.704  Sum_probs=25.6

Q ss_pred             CceEEEEeeCCCCCCccccccCccCccC
Q psy4884          76 IHTEAICRCWKSKKFPFCDNSHKYHNKF  103 (116)
Q Consensus        76 ~~~~~lCrCg~Sk~~PfCDGSH~~~~~e  103 (116)
                      +..+++||||+|.|+|||||||.+..++
T Consensus        28 ~~~~~LCrCG~S~NKPfCDGtH~k~gf~   55 (78)
T COG3369          28 DEQAALCRCGHSENKPFCDGTHKKTGFD   55 (78)
T ss_pred             ceEEEEEeccCcCCCCccCCcccccccc
Confidence            3779999999999999999999998884

>KOG4605|consensus

Probab=99.13  E-value=1e-10  Score=87.79  Aligned_cols=38  Identities=39%  Similarity=0.830  Sum_probs=31.1

Q ss_pred             cCCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeee
Q psy4884          73 DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLK  114 (116)
Q Consensus        73 d~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~  114 (116)
                      +.+ ++|.||.||+|+++|||||||+...   -.++.|+-++
T Consensus        53 ~a~-KtY~WCsCG~S~sQPfCDGsHk~~~---~tklrPvrFk   90 (129)
T KOG4605|consen   53 VAG-KTYRWCSCGRSKSQPFCDGSHKFQG---RTKLRPVRFK   90 (129)
T ss_pred             ecC-CEEEEEeccccCCCccccccccccc---cccccceEeE
Confidence            444 9999999999999999999998654   5677777543

>KOG4605|consensus

Probab=98.82  E-value=9.8e-09  Score=77.13  Aligned_cols=75  Identities=15%  Similarity=0.253  Sum_probs=50.8

Q ss_pred             cCceeeccccce-eeeeeeeeeccCCCccccCCCccccccccccCCceeeeEEeecCCCceEEEEeeCCCCCCccccccC
Q psy4884          19 IPTCYPVEDTTE-KVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSH   97 (116)
Q Consensus        19 ~p~~~~~~~a~~-a~~gy~~yk~i~~~~~~~~~~~~~vN~~I~k~~pKvV~~~~id~~~~~~~lCrCg~Sk~~PfCDGSH   97 (116)
                      .|+-+|++++-+ +-+++..++   |.+|+++.++..-     +-+-+.| .|.+|.+ ..||+|.|+++.+.|||||+|
T Consensus        46 ~p~KVhL~a~KtY~WCsCG~S~---sQPfCDGsHk~~~-----~tklrPv-rFkvekt-g~~wlCnCKqT~~rP~CDGtH  115 (129)
T KOG4605|consen   46 TPIKVHLVAGKTYRWCSCGRSK---SQPFCDGSHKFQG-----RTKLRPV-RFKVEKT-GMVWLCNCKQTQRRPYCDGTH  115 (129)
T ss_pred             CceEEEEecCCEEEEEeccccC---CCccccccccccc-----cccccce-EeEeccc-ceEEeecccccCCCCccCCcc
Confidence            467778887654 223333333   4489999774332     2222322 4667777 899999999999999999999


Q ss_pred             ccCccC
Q psy4884          98 KYHNKF  103 (116)
Q Consensus        98 ~~~~~e  103 (116)
                      .....+
T Consensus       116 ~~~~~q  121 (129)
T KOG4605|consen  116 RSERVQ  121 (129)
T ss_pred             cccccc
Confidence            876543

>PF10660 MitoNEET_N: Iron-containing outer mitochondrial membrane protein N-terminus ; InterPro: IPR019610 The CDGSH iron sulphur domain are a group of iron-sulphur (Fe-S) clusters and a unique 39 amino acid CDGSH domain [C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H]

Probab=97.50  E-value=2.7e-05  Score=52.48  Aligned_cols=31  Identities=26%  Similarity=0.365  Sum_probs=2.8

Q ss_pred             hhhhhhhccCceeeccccceeeeeeeeeeccCCCccccCCC
Q psy4884          11 ICLDLLSFIPTCYPVEDTTEKVIGPLDYENIPSEEFWGTEP   51 (116)
Q Consensus        11 ~~~~~l~~~p~~~~~~~a~~a~~gy~~yk~i~~~~~~~~~~   51 (116)
                      -.+|||+++|+..     ++|++||++||     .|+++++
T Consensus        32 s~kdWl~Lvp~~~-----~va~igYlayk-----~f~pk~~   62 (64)
T PF10660_consen   32 SVKDWLALVPFAA-----AVAGIGYLAYK-----PFCPKKK   62 (64)
T ss_dssp             ----------------------------------CC---ST
T ss_pred             cHHHHHHHHhHHH-----HHHHHHHHhhe-----eeccccc
Confidence            3689999999998     99999999999     8888855

The CDGSH iron sulphur domain protein (also referred to as mitoNEET) is an integral membrane protein located in the outer mitochondrial membrane and whose function may be to transport iron into the mitochondria []. Iron in turn is essential for the function of several mitochondrial enzymes. This entry represents the N-terminal of the mitoNEET and Miner-type proteins that carry a CDGSH-type cluster-binding domain (IPR018967 from INTERPRO) that coordinate a redox-active 2Fe-2S cluster. In the outer mitochondrian membrane (OMM), the CDGSH 2Fe-2S-containing domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by the N-terminal domain found in higher vertebrates [, , ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM.; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 2R13_A 3REE_A 2QD0_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
3fnv_A	83	Crystal Structure Of Miner1: The Redox-Active 2fe-2		2e-10
4f2c_A	76	The Crystal Structure Of A Human Mitoneet Double Mu		1e-09
4ezf_A	77	The Crystal Structure Of A Human Mitoneet Mutant Wi		1e-09
3s2q_A	83	The Crystal Structure Of At5g51720 (At-Neet) Length		1e-09
3ew0_A	80	The Novel 2fe-2s Outer Mitochondrial Protein Mitone		2e-09
3ree_A	84	Crystal Structure Of Mitoneet Length = 84		2e-09
2qd0_A	81	Crystal Structure Of Mitoneet Length = 81		2e-09
4f1e_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		2e-09
2r13_A	79	Crystal Structure Of Human Mitoneet Reveals A Novel		2e-09
2qh7_A	76	Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochon		2e-09
4f28_A	76	The Crystal Structure Of A Human Mitoneet Mutant Wi		6e-09
3s2r_A	83	Atchloroneet (H87c Mutant) Length = 83		2e-08
3lpq_A	79	Human Mitoneet With 2fe-2s Coordinating Ligand His		3e-08

>pdb|3FNV|A Chain A, Crystal Structure Of Miner1: The Redox-Active 2fe-2s Protein Causative In Wolfram Syndrome 2 Length = 83

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 54  LINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLT 112
           LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DNVGPL 
Sbjct: 18  LINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLI 77
Query: 113 LKR 115
           LK+
Sbjct: 78  LKK 80

>pdb|4F2C|A Chain A, The Crystal Structure Of A Human Mitoneet Double Mutant In Which Gly 66 Are Asp 67 Are Both Replaced With Ala Residues Length = 76

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLAAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 69
Query: 112 TLKR 115
            +K+
Sbjct: 70  IIKK 73

>pdb|4EZF|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With An Ala Inserted Between Asp 67 And Lys 68 Length = 77

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 52  RRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGP 110
           + +IN +  K +  +   F + D G      CRCW+SKKFPFCD +H  HN+   DNVGP
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 69
Query: 111 LTLKR 115
           L +K+
Sbjct: 70  LIIKK 74

>pdb|3S2Q|A Chain A, The Crystal Structure Of At5g51720 (At-Neet) Length = 83

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 55  INKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           IN    K+ D V D   + +   +    CRCW+S  FP CD SH  HNK + DNVGPL L
Sbjct: 21  INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLL 80
Query: 114 KR 115
           K+
Sbjct: 81  KK 82

>pdb|3EW0|A Chain A, The Novel 2fe-2s Outer Mitochondrial Protein Mitoneet Displays Conformational Flexibility In Its N-Terminal Cytoplasmic Tethering Domain Length = 80

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 14  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 73
Query: 112 TLKR 115
            +K+
Sbjct: 74  IIKK 77

>pdb|3REE|A Chain A, Crystal Structure Of Mitoneet Length = 84

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 11  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 70
Query: 112 TLKR 115
            +K+
Sbjct: 71  IIKK 74

>pdb|2QD0|A Chain A, Crystal Structure Of Mitoneet Length = 81

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 13  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 72
Query: 112 TLKR 115
            +K+
Sbjct: 73  IIKK 76

>pdb|4F1E|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Asp 67 Replaced By A Gly Length = 76

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGGKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 69
Query: 112 TLKR 115
            +K+
Sbjct: 70  IIKK 73

>pdb|2R13|A Chain A, Crystal Structure Of Human Mitoneet Reveals A Novel [2fe- 2s] Cluster Coordination Length = 79

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 13  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 72
Query: 112 TLKR 115
            +K+
Sbjct: 73  IIKK 76

>pdb|2QH7|A Chain A, Mitoneet Is A Uniquely Folded 2fe-2s Outer Mitochondrial Membrane Protein Stabilized By Pioglitazone Length = 76

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 10  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 69
Query: 112 TLKR 115
            +K+
Sbjct: 70  IIKK 73

>pdb|4F28|A Chain A, The Crystal Structure Of A Human Mitoneet Mutant With Met 62 Replaced By A Gly Length = 76

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F  +        CRCW+SKKFPFCD +H  HN+   DNVGPL
Sbjct: 10  KAMINLHIQKDNPKIVHAFDGEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPL 69
Query: 112 TLKR 115
            +K+
Sbjct: 70  IIKK 73

>pdb|3S2R|A Chain A, Atchloroneet (H87c Mutant) Length = 83

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 55  INKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTL 113
           IN    K+ D V D   + +   +    CRCW+S  FP CD S   HNK + DNVGPL L
Sbjct: 21  INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLL 80
Query: 114 KR 115
           K+
Sbjct: 81  KK 82

>pdb|3LPQ|A Chain A, Human Mitoneet With 2fe-2s Coordinating Ligand His 87 Replaced With Cys Length = 79

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 52  RRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPL 111
           + +IN +  K +  +   F ++        CRCW+SKKFPFCD +   HN+   DNVGPL
Sbjct: 14  KAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGACTKHNEETGDNVGPL 73
Query: 112 TLKR 115
            +K+
Sbjct: 74  IIKK 77

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	3e-15
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	5e-15
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	1e-14
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	7e-07
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A Length = 83

 Score = 64.4 bits (156), Expect = 3e-15
 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 50  EPRRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNV 108
           E    IN    K+ D V D   + +   +    CRCW+S  FP CD S   HNK + DNV
Sbjct: 16  EGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNV 75

Query: 109 GPLTLKR 115
           GPL LK+
Sbjct: 76  GPLLLKK 82

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens} Length = 83

 Score = 64.0 bits (155), Expect = 5e-15
 Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 49  TEPRRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDN 107
            +   LIN    K +  V +   I D  +   A CRCW+SK FP CD SH  HN+   DN
Sbjct: 13  QQKDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDN 72

Query: 108 VGPLTLKR 115
           VGPL LK+
Sbjct: 73  VGPLILKK 80

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A Length = 80

 Score = 62.8 bits (152), Expect = 1e-14
 Identities = 26/65 (40%), Positives = 38/65 (58%)

Query: 51  PRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGP 110
            + +IN +  K +  +   F ++        CRCW+SKKFPFCD +H  HN+   DNVGP
Sbjct: 13  NKAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGP 72

Query: 111 LTLKR 115
           L +K+
Sbjct: 73  LIIKK 77

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum} Length = 69

 Score = 42.5 bits (100), Expect = 7e-07
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 65 VVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHK 98
          V      +        +CRC  S   PFCD SHK
Sbjct: 27 VTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHK 60

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis} Length = 60

 Score = 38.8 bits (90), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 70 FTIDTGIHTEAICRCWKSKKFPFCDNSHK 98
          + +  G     +CRC  S   P CD +H 
Sbjct: 13 YEVKIGGRAIYLCRCGHSGSKPHCDGTHA 41

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 32/127 (25%)

Query: 12  CLDLLS-FIPT------CYPVEDTTEKVIGPLDYENI---PSEEFWGTEPRRLINKYYSK 61
             D+LS F         C  V+D  + ++   + ++I          +   RL     SK
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV---SGTLRLFWTLLSK 74

Query: 62  HHDVVTDRFTID----------TGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDN--VG 109
             ++V  +F  +          + I TE       ++ +       +  ++ + DN    
Sbjct: 75  QEEMV-QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY------IEQRDRLYNDNQVFA 127

Query: 110 PLTLKRP 116
              + R 
Sbjct: 128 KYNVSRL 134

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
4ezf_A	77	Mitoneet, CDGSH iron-sulfur domain-containing prot	99.96
3fnv_A	83	CDGSH iron sulfur domain-containing protein 2; dia	99.96
3s2r_A	83	AT5G51720/MIO24_14; redox, Fe-S cluster, metal bin	99.96
3ew0_A	80	Mitoneet, CDGSH iron sulfur domain-containing prot	99.94
3tbo_A	60	Zinc finger, CDGSH-type domain protein; iron-sulfu	99.51
3tbm_A	69	Putative uncharacterized protein; iron-sulfur, CDG	99.45
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.43
3tbn_A	87	Putative uncharacterized protein; CDGSH, iron-sulf	99.33

>4ezf_A Mitoneet, CDGSH iron-sulfur domain-containing protein 1; 2Fe-2S proteins, membrane, mitochondrion, signal-anchor, transmembrane; 1.19A {Homo sapiens} PDB: 2qd0_A 3ree_A 2r13_A 3ew0_A 2qh7_A 4f1e_A 4f2c_A 4f28_A 3lpq_A

Probab=99.96  E-value=2.3e-31  Score=183.19  Aligned_cols=70  Identities=41%  Similarity=0.845  Sum_probs=63.6

Q ss_pred             cccCCC--ccccccccccCCceeeeEEee-cCCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeeeC
Q psy4884          46 FWGTEP--RRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR  115 (116)
Q Consensus        46 ~~~~~~--~~~vN~~I~k~~pKvV~~~~i-d~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~~  115 (116)
                      |+.+++  +++||..|++++||||+.|++ ++++.+++|||||+|+++|||||||.++|+++|||||||++++
T Consensus         2 ~~~k~~~~~~~vN~~i~kd~pKVVd~~diEdl~~~k~~~CrC~~Sk~~PfCDGsH~~hn~etGdnvgPl~~~~   74 (77)
T 4ezf_A            2 FYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDAKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKK   74 (77)
T ss_dssp             CCSCCCSCTTCSCSSSCTTSSSEEEEEESBTTSCSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEEC
T ss_pred             ccccccCcccccccceecCCCcEeeccchhhcCCccEEEEeCCCCCCCCccCCchhhhccccCCCccCeEEEe
Confidence            455554  899999999999999999999 6663499999999999999999999999999999999999986

>3fnv_A CDGSH iron sulfur domain-containing protein 2; diabetes, membrane bound, thiazolidinedione, oxidative stres endoplasmic reticulum, membrane; 2.10A {Homo sapiens}

Probab=99.96  E-value=3.1e-31  Score=184.67  Aligned_cols=71  Identities=44%  Similarity=0.800  Sum_probs=60.6

Q ss_pred             ccccCCC---ccccccccccCCceeeeEEee-cCCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeeeC
Q psy4884          45 EFWGTEP---RRLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR  115 (116)
Q Consensus        45 ~~~~~~~---~~~vN~~I~k~~pKvV~~~~i-d~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~~  115 (116)
                      .|+++.+   .++||..|++++|||||.+++ +++.++++|||||+|+++|||||||.++++++|||||||+|++
T Consensus         6 ~~~~~~~~~k~~~vN~~I~k~~pKvVd~~diedl~~~k~~~CrC~~S~~~PfCDGsH~~~n~etGdnvgPli~~~   80 (83)
T 3fnv_A            6 PFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKK   80 (83)
T ss_dssp             ----------CCCSCSSSCTTSSSEEEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHCCCEEEEEEEC
T ss_pred             hhccccccCcccccCcceecCCCcEeeeechhhccCCCEEEEeCCCCCCCCccCchhhhcccccCCccCCeEEEe
Confidence            4554443   588999999999999999999 6665889999999999999999999999999999999999986

>3s2r_A AT5G51720/MIO24_14; redox, Fe-S cluster, metal binding protein; 1.14A {Arabidopsis thaliana} PDB: 3s2q_A

Probab=99.96  E-value=2.8e-30  Score=179.81  Aligned_cols=63  Identities=43%  Similarity=0.754  Sum_probs=59.6

Q ss_pred             cccccccccCCceeeeEEee-cCCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeeeC
Q psy4884          53 RLINKYYSKHHDVVTDRFTI-DTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR  115 (116)
Q Consensus        53 ~~vN~~I~k~~pKvV~~~~i-d~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~~  115 (116)
                      +++|+.|+|+++|+||.+++ |+++.+++|||||+|+++|||||||.++|+++||||||++|+|
T Consensus        19 ~~vN~~I~K~~~KVVD~vdiedl~~~~~~~CrC~~Sk~~P~CDGSH~k~n~etGdNvgPlivkk   82 (83)
T 3s2r_A           19 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSCVKHNKANGDNVGPLLLKK   82 (83)
T ss_dssp             -CCCSSTTTTSSSCCEEEEGGGCCSSEEEECSSSCCTTTTBCCSHHHHHHHHHTCCEEEEEEEC
T ss_pred             CccCchhhcCCCceecccchhhccCCceEEEecCCCCCCCccCchhHHHhhhcCCCcCCeEEec
Confidence            68999999999999999999 6665799999999999999999999999999999999999997

>3ew0_A Mitoneet, CDGSH iron sulfur domain-containing protein 1; mitochondrial outer membrane, 2Fe-2S proteins, isotopic LABE highyield expression; 1.40A {Homo sapiens} PDB: 2r13_A 2qd0_A 3ree_A 2qh7_A 3lpq_A

Probab=99.94  E-value=9.9e-28  Score=165.77  Aligned_cols=63  Identities=43%  Similarity=0.904  Sum_probs=59.7

Q ss_pred             ccccccccccCCceeeeEEeec-CCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeeeC
Q psy4884          52 RRLINKYYSKHHDVVTDRFTID-TGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLKR  115 (116)
Q Consensus        52 ~~~vN~~I~k~~pKvV~~~~id-~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~~  115 (116)
                      ++++|..|++++|++|+.++++ ++ ++++|||||+|+|+|||||||.++++|+|||||||+|++
T Consensus        14 ~~~vni~I~k~gP~~V~~~~led~~-~~~~~C~Cg~S~~~PfCDGsH~~~~~etgdnvgPl~~~~   77 (80)
T 3ew0_A           14 KAMINLHIQKDNPKIVHAFDMEDLG-DKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKK   77 (80)
T ss_dssp             CCCSCSSSCTTSSSEEEEECGGGCC-SEEEECSSSCCTTTTBCCSHHHHHHHHHCCCCCCEEEEC
T ss_pred             CCccCeEEeCCCCEEEEeeccccCC-CeEEEeeCCCCCCCcccCCccCCcCcccCCCcCCEEEEe
Confidence            7889999999999999998885 55 899999999999999999999999999999999999986

>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}

Probab=99.51  E-value=3.4e-15  Score=98.49  Aligned_cols=42  Identities=21%  Similarity=0.263  Sum_probs=32.2

Q ss_pred             ccccCCceeeeEEeecCCCceEEEEeeCCCCCCccccccCccCccCC
Q psy4884          58 YYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFH  104 (116)
Q Consensus        58 ~I~k~~pKvV~~~~id~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~et  104 (116)
                      .+..++|..|+   ++  +++++|||||+|+|+|||||||+..+++.
T Consensus         6 ~v~~ngP~~v~---~e--~~~~~lC~CG~S~n~PFCDGSHk~~~f~~   47 (60)
T 3tbo_A            6 RAIENGPYEVK---IG--GRAIYLCRCGHSGSKPHCDGTHAKVGFKA   47 (60)
T ss_dssp             EECTTSCEEEE---C-----CEEECCSSCCTTTTBCCSHHHHHTCCC
T ss_pred             EEeCCCCEEEE---EC--CcEEEEEECCCCCCCCccCCcCCCCcccc
Confidence            45567888775   33  36679999999999999999999877753

>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}

Probab=99.45  E-value=2.4e-14  Score=96.29  Aligned_cols=49  Identities=27%  Similarity=0.336  Sum_probs=36.3

Q ss_pred             cccccccCCceeeeE-Eee--------cCCCceEEEEeeCCCCCCccccccCccCccC
Q psy4884          55 INKYYSKHHDVVTDR-FTI--------DTGIHTEAICRCWKSKKFPFCDNSHKYHNKF  103 (116)
Q Consensus        55 vN~~I~k~~pKvV~~-~~i--------d~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~e  103 (116)
                      +...+..++|..|.. +++        +..+.+++|||||+|+|+|||||||....++
T Consensus         8 ~~I~v~~nGPl~V~G~v~i~~~dG~~~~~~~~~~~lC~Cg~S~n~PfCDGsH~~~~f~   65 (69)
T 3tbm_A            8 VVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFD   65 (69)
T ss_dssp             CEEEECTTSCEEEESSCEEEESSCCEECCBTTEEEECCSSCCSSTTBCCSHHHHTTCC
T ss_pred             eEEEEeCCCCEEEECCCeEECCCCCEEeeCCCEEEEeeCCCCCCCCccCCCcCCCCcc
Confidence            335566777777763 333        1124679999999999999999999988775

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.43  E-value=9.8e-14  Score=97.13  Aligned_cols=72  Identities=25%  Similarity=0.281  Sum_probs=53.3

Q ss_pred             hhccCceeecccc-ceeeeeeeeeeccCCCccccCCCccccccccccCCceeeeEEeecCCCceEEEEeeCCCCCCcccc
Q psy4884          16 LSFIPTCYPVEDT-TEKVIGPLDYENIPSEEFWGTEPRRLINKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCD   94 (116)
Q Consensus        16 l~~~p~~~~~~~a-~~a~~gy~~yk~i~~~~~~~~~~~~~vN~~I~k~~pKvV~~~~id~~~~~~~lCrCg~Sk~~PfCD   94 (116)
                      +..-|.-+.+|++ +.++......++-|   |.+++++.-        + -..-.|.++.+ +++|+|+|++|+|.||||
T Consensus        15 ~~~~P~~v~le~g~~~~~C~CG~S~~~P---fCDGSH~~~--------~-f~P~~f~~e~~-~~~~lC~CK~T~n~PfCD   81 (87)
T 3tbn_A           15 AQKAPYPVTVEAGKTYHWCACGRSKAQP---FCDGSHKGT--------G-LAPVAYTPDKA-GTAYFCGCKASKAPPLCD   81 (87)
T ss_dssp             SCSSCEEEEECTTCCEEECSSSCCSSTT---BCCSTTTTT--------T-CCCEEECCSSC-EEEEECSSSCCSSTTBCC
T ss_pred             ccCCCEEEEeCCCCEEEEeeCCCCCCCC---CcCCccccC--------C-ccceEEEECCC-cEEEEecCCCCCCCCccC
Confidence            4567888888888 56777777777444   999977331        2 22234566666 889999999999999999


Q ss_pred             ccCccC
Q psy4884          95 NSHKYH  100 (116)
Q Consensus        95 GSH~~~  100 (116)
                      |||+++
T Consensus        82 GsH~~L   87 (87)
T 3tbn_A           82 GTHKTL   87 (87)
T ss_dssp             SGGGTC
T ss_pred             CcCCcC
Confidence            999863

>3tbn_A Putative uncharacterized protein; CDGSH, iron-sulfur, miner2, metal binding protein; 1.15A {Magnetospirillum magneticum}

Probab=99.33  E-value=7.2e-13  Score=92.72  Aligned_cols=50  Identities=28%  Similarity=0.557  Sum_probs=37.3

Q ss_pred             cccccccCCceeeeEEeecCCCceEEEEeeCCCCCCccccccCccCccCCCCccCeeeee
Q psy4884          55 INKYYSKHHDVVTDRFTIDTGIHTEAICRCWKSKKFPFCDNSHKYHNKFHKDNVGPLTLK  114 (116)
Q Consensus        55 vN~~I~k~~pKvV~~~~id~~~~~~~lCrCg~Sk~~PfCDGSH~~~~~etgdnvgPlii~  114 (116)
                      ..+.|...+|.+++   ++.+ ++++||+||+|+|+|||||||+..+      ..|+.++
T Consensus        10 ~~~~~~~~~P~~v~---le~g-~~~~~C~CG~S~~~PfCDGSH~~~~------f~P~~f~   59 (87)
T 3tbn_A           10 TDPVIAQKAPYPVT---VEAG-KTYHWCACGRSKAQPFCDGSHKGTG------LAPVAYT   59 (87)
T ss_dssp             TSCCCSCSSCEEEE---ECTT-CCEEECSSSCCSSTTBCCSTTTTTT------CCCEEEC
T ss_pred             CCcccccCCCEEEE---eCCC-CEEEEeeCCCCCCCCCcCCccccCC------ccceEEE
Confidence            34566667776554   4544 7899999999999999999998753      4566553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00