Psyllid ID: psy5004

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
Protein Sequence
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHcccEEEEEEccccccccccccEEEEEEccccccccccEEEEEEEEccEEEEEHHHHHHHHHHHHcccccccccccccccccccHHHHcccccccEEcccccccccEEEEEEcccccccHHHccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcccEEEEEEEccccccccccccEEEEcccccccccccEEEEEEEcccEEEEcHHHHHHHHHHHcccccccccccccccccccHEEEEcccccHccccccccccccccEEEEcHHHHHHHHHHHccccccccccccccccccHHHEEEcccccHccccc
Coil and Loop (DISEMBL)
MKLLVLTLSLISFVSRCSALLCYQcvstqpgcgtpfkwlwypsiscpeedDICVKIIERkgaeeiitRDCLSTVKAfrtdipadryegcraaakdpklanyvnhsipeldvqrpselktgyteeiitRDCLSTVKAfrtdipadryegcraaakdpklanyvnhsipeldvqr
Flexible Loop (DISEMBL)
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIErkgaeeiitrdclstvkafrtdipadryeGCRAAakdpklanyvnhsipeldvqrpselktgyteeiitrdclstVKAFrtdipadryeGCRAaakdpklanyvnhsipeldvqr
Low Complexity Region (SEG)
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR
Disordered region (IsUnstruct)
**LLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYV***********
Disordered Region (DISOPRED)
*KLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSI*EL*V**
Disordered Region (DISEMBL)
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR
Disordered Region (DISPRO)
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPEL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
240848789	161	uncharacterized protein LOC100168749 pre	0.641	0.689	0.684	6e-40
383852296	154	PREDICTED: uncharacterized protein LOC10	0.687	0.772	0.576	5e-36
345487346	155	PREDICTED: hypothetical protein LOC10012	0.624	0.696	0.657	1e-35
340709946	160	PREDICTED: hypothetical protein LOC10065	0.647	0.7	0.598	2e-35
350421346	160	PREDICTED: hypothetical protein LOC10074	0.647	0.7	0.589	3e-35
307185897	154	hypothetical protein EAG_05804 [Camponot	0.653	0.733	0.601	6e-35
91077808	155	PREDICTED: similar to conserved hypothet	0.687	0.767	0.586	2e-34
380022214	155	PREDICTED: uncharacterized protein LOC10	0.549	0.612	0.694	9e-34
242008769	145	conserved hypothetical protein [Pediculu	0.549	0.655	0.697	5e-33
332373252	158	unknown [Dendroctonus ponderosae]	0.774	0.848	0.525	6e-33

>gi|240848789|ref|NP_001155799.1| uncharacterized protein LOC100168749 precursor [Acyrthosiphon pisum] gi|239788070|dbj|BAH70730.1| ACYPI009426 [Acyrthosiphon pisum]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 91/111 (81%)

Query: 3   LLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA 62
            L L +    FV   S LLCYQCVST PGCGTPFKWLW+ +ISCPEEDD+CVK+IE+ GA
Sbjct: 7   FLSLVIFSTIFVHAQSLLLCYQCVSTHPGCGTPFKWLWHKTISCPEEDDLCVKVIEKVGA 66

Query: 63  EEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           EE ITRDCLS++K FRTDIPAD+YEGCR ++ D KL +YVN+SIPELD++R
Sbjct: 67  EERITRDCLSSLKGFRTDIPADKYEGCRKSSVDVKLGHYVNNSIPELDIKR 117

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852296|ref|XP_003701664.1| PREDICTED: uncharacterized protein LOC100876421 [Megachile rotundata]

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 93/125 (74%), Gaps = 6/125 (4%)

Query: 2   KLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG 61
           K++ + + L   +++  +L CY+C S QPGCGTP  WLWY   +CPE DD CVKIIE+KG
Sbjct: 3   KIICVIVLLSMLINKGESLYCYRCNSNQPGCGTPLNWLWYWGETCPEYDDKCVKIIEKKG 62

Query: 62  AEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGY 121
           AE +ITR+CLS+V+ FRTDIPADRYEGCRAAAKD KL +YVN+SI +LD+ R       Y
Sbjct: 63  AETMITRECLSSVRGFRTDIPADRYEGCRAAAKDVKLGHYVNNSISQLDIHRD------Y 116

Query: 122 TEEII 126
            +E+I
Sbjct: 117 YDEVI 121

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487346|ref|XP_001606729.2| PREDICTED: hypothetical protein LOC100120756 [Nasonia vitripennis]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 82/108 (75%)

Query: 6   LTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEI 65
           + L L  F  R  AL CY+C S  PGCGTPF WLWY   +CPE DD CVKIIERKGAE I
Sbjct: 8   IALLLAVFAQRGDALYCYRCNSNMPGCGTPFNWLWYWGETCPEYDDKCVKIIERKGAETI 67

Query: 66  ITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           ITR+CLS V+ FRTDIPAD+YEGCR AAKD +L +YVN+SI +LD+ R
Sbjct: 68  ITRECLSAVQGFRTDIPADKYEGCRPAAKDVRLGHYVNNSITQLDIHR 115

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709946|ref|XP_003393560.1| PREDICTED: hypothetical protein LOC100651313 [Bombus terrestris]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 87/112 (77%)

Query: 2   KLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG 61
           ++ ++ + L   V++  +L CY+C S QPGCGTP  WLWY   +CPE DD C+KIIERKG
Sbjct: 4   RMFLIAVLLTVLVNKGDSLYCYRCNSNQPGCGTPLNWLWYWGETCPEYDDKCIKIIERKG 63

Query: 62  AEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           AE +ITRDCLS+V++FR DIPADRYEGCR AAKD +L +YVN+SI +LD+ R
Sbjct: 64  AETMITRDCLSSVRSFRKDIPADRYEGCRPAAKDVQLGHYVNNSIWQLDIHR 115

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350421346|ref|XP_003492813.1| PREDICTED: hypothetical protein LOC100741951 [Bombus impatiens]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 87/112 (77%)

Query: 2   KLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG 61
           ++ ++ + L   +++  +L CY+C S QPGCGTP  WLWY   +CPE DD C+KIIERKG
Sbjct: 4   RMFLIAVLLTVLINKGDSLYCYRCNSNQPGCGTPLNWLWYWGETCPEYDDKCIKIIERKG 63

Query: 62  AEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           AE +ITRDCLS+V++FR DIPADRYEGCR AAKD +L +YVN+SI +LD+ R
Sbjct: 64  AETMITRDCLSSVRSFRKDIPADRYEGCRPAAKDVQLGHYVNNSIWQLDIHR 115

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185897|gb|EFN71724.1| hypothetical protein EAG_05804 [Camponotus floridanus]

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 68/113 (60%), Positives = 85/113 (75%)

Query: 1   MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK 60
           M  ++ T+  +   S+  +L CY+C S  PGCGTP  WLWY   +CPE DD CVKIIERK
Sbjct: 1   MSKVLFTILFLILASQGDSLYCYRCNSNHPGCGTPLNWLWYWGETCPEYDDKCVKIIERK 60

Query: 61  GAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           GAE IITR+CLS+V++FRTDIPAD YEGCR AAKD +L +YVN+SI +LD+ R
Sbjct: 61  GAETIITRECLSSVRSFRTDIPADHYEGCRPAAKDVRLGHYVNNSIHQLDIHR 113

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077808|ref|XP_970231.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270001488|gb|EEZ97935.1| hypothetical protein TcasGA2_TC000323 [Tribolium castaneum]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 84/121 (69%)

Query: 10  LISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRD 69
           L +F  + SAL CYQCVS QPGCGTPF WLW+ +  CPE+DD+CVKIIE K    +ITRD
Sbjct: 10  LATFFLQASALWCYQCVSNQPGCGTPFNWLWHWTKVCPEDDDVCVKIIEEKDGNTMITRD 69

Query: 70  CLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTGYTEEIITRD 129
           CLS ++  RTDIPAD YEGCR AA D KL +YVN+SI ELDV R    KT +    +   
Sbjct: 70  CLSYLQGVRTDIPADHYEGCRPAALDVKLGHYVNNSIKELDVHRNFYDKTTWCFCFLDHR 129

Query: 130 C 130
           C
Sbjct: 130 C 130

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022214|ref|XP_003694947.1| PREDICTED: uncharacterized protein LOC100864197 [Apis florea]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 66/95 (69%), Positives = 78/95 (82%)

Query: 19  ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFR 78
           +L CY+C S  PGCGTP  WLWY   +CPE DD CVKIIERKGAE +ITRDCLS+V++FR
Sbjct: 21  SLYCYRCNSNHPGCGTPLNWLWYWGETCPEYDDKCVKIIERKGAETMITRDCLSSVRSFR 80

Query: 79  TDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           TDIPADRYEGCR AAKD +L +YVN+SI +LD+ R
Sbjct: 81  TDIPADRYEGCRPAAKDVRLGHYVNNSIWQLDIHR 115

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008769|ref|XP_002425172.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508874|gb|EEB12434.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 77/96 (80%), Gaps = 1/96 (1%)

Query: 18  SALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAF 77
           + L CY+CVST PGC TPF WLWY S  CPE++D CVKI ERKG  EIITRDCLS++ +F
Sbjct: 8   TKLYCYKCVSTHPGCATPFNWLWYWSHQCPEDNDKCVKITERKGGTEIITRDCLSSL-SF 66

Query: 78  RTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
           RTDIPAD YEGCR AA DP+LA+YVN SI E DV+R
Sbjct: 67  RTDIPADHYEGCRPAAHDPRLAHYVNSSIKEYDVKR 102

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373252|gb|AEE61767.1| unknown [Dendroctonus ponderosae]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%)

Query: 1   MKLLVLTLSLISFVSRCSALL-CYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIER 59
           +  +VL LSL++   + SA L CY CVSTQPGCG+P  WLW+ + +CPE+DD+CVKIIE 
Sbjct: 4   LPFIVLLLSLLA--CKGSAFLWCYHCVSTQPGCGSPLNWLWHWTKTCPEDDDVCVKIIEE 61

Query: 60  KGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKT 119
           K  E +ITRDCLS+++  RTDIPAD YEGCR AA D KL NYV++SI ELD+ R     T
Sbjct: 62  KDGETMITRDCLSSMRGIRTDIPADHYEGCRPAAVDSKLGNYVSNSIKELDIYRNYYDNT 121

Query: 120 GYTEEIITRDCLSTVKA 136
            +    +   C   ++A
Sbjct: 122 TWCFCFLDHRCNDGLRA 138

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
FB|FBgn0036198	158	crim "crimpled" [Drosophila me	0.630	0.689	0.562	7.9e-30

FB|FBgn0036198 crim "crimpled" [Drosophila melanogaster (taxid:7227)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 63/112 (56%), Positives = 77/112 (68%)

Query:     4 LVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKW--LWYPSISCPEEDDICVKIIERKG 61
             L+  L L + +   SA+ CY+C S  PGC   F W  + +    CPE DDICVK+ ER+G
Sbjct:     7 LIAALLLAALIHEGSAIWCYRCTSATPGCAEKFNWRGIGFLGEHCPEPDDICVKVTERRG 66

Query:    62 AEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
             A E ITRDCLS + +FR DIPAD+YEGCR AA D KLANYVNH+I E DV+R
Sbjct:    67 ARETITRDCLSAL-SFRKDIPADKYEGCRPAAHDEKLANYVNHTIKEHDVRR 117

GO:0019991 "septate junction assembly" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	173
cd00117	79	LU Ly-6 antigen / uPA receptor -like domain; occur	97.49
smart00134	79	LU Ly-6 antigen / uPA receptor -like domain. Three	97.14
PF00087	63	Toxin_1: Snake toxin; InterPro: IPR003571 Snake to	96.42
cd00206	64	snake_toxin Snake toxin domain, present in short a	95.98
PF00021	77	UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor si	95.5
PF06211	107	BAMBI: BMP and activin membrane-bound inhibitor (B	94.86
PF01064	83	Activin_recp: Activin types I and II receptor doma	94.73
PF05444	152	DUF753: Protein of unknown function (DUF753); Inte	94.46
PF05444	152	DUF753: Protein of unknown function (DUF753); Inte	93.47
PF02988	83	PLA2_inh: Phospholipase A2 inhibitor; InterPro: IP	91.87
PF06579	129	Ly-6_related: Caenorhabditis elegans ly-6-related	89.02

>cd00117 LU Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor

Probab=97.49  E-value=0.00015  Score=50.40  Aligned_cols=47  Identities=30%  Similarity=0.732  Sum_probs=36.9

Q ss_pred             eeeecccCC-CCCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004          20 LLCYQCVST-QPGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~-~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS~~   74 (173)
                      |+||.|.+. ...|..+        ++||+.++.|+++.....    ....++|+|+++.
T Consensus         1 L~C~~C~~~~~~~C~~~--------~~C~~~~~~C~~~~~~~~~~~~~~~~~~rgC~~~C   52 (79)
T cd00117           1 LECYSCTGVSTSSCSTE--------TNCPSPDDQCLTAVATVIEESVRLSLVVRGCASDC   52 (79)
T ss_pred             CccCcCCCCCCCCCCCC--------CccCCCCCEeeEEEEEEEeeccccceEECcccCCC
Confidence            789999883 4468876        599999999999877742    3466889999954

Topology of these domains is similar to that of snake venom neurotoxins.

>smart00134 LU Ly-6 antigen / uPA receptor -like domain

Probab=97.14  E-value=0.00049  Score=48.03  Aligned_cols=45  Identities=22%  Similarity=0.751  Sum_probs=34.2

Q ss_pred             eeeecccCC-CCCCCCCCCCCccccccCCCCCCceEEEEEecC---cceeEeechhh
Q psy5004          20 LLCYQCVST-QPGCGTPFKWLWYPSISCPEEDDICVKIIERKG---AEEIITRDCLS   72 (173)
Q Consensus        20 L~CY~C~S~-~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g---~~~~itRdClS   72 (173)
                      |.||.|.+. ...|..+        ++||+.++.|.+++.+..   ....++|+|.+
T Consensus         1 L~C~~C~~~~~~~C~~~--------~~C~~~~~~C~~~~~~~~~~~~~~~~~rgC~~   49 (79)
T smart00134        1 LQCYSCTGNPDSSCSSE--------EECRSPDDVCLTVVAEVISGSVGSVVYKGCAT   49 (79)
T ss_pred             CcceecCCcCCCCCCCc--------ceeCCCCCEeEEEEEEEEecCCCceEEcCccC
Confidence            689999875 3468776        579999999999875432   24568899993

Three-fold repeated domain in urokinase-type plasminogen activator receptor; occurs singly in other GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2). Topology of these domains is similar to that of snake venom neurotoxins.

>PF00087 Toxin_1: Snake toxin; InterPro: IPR003571 Snake toxins belong to a family of proteins [] which groups short and long neurotoxins, cytotoxins and short toxins, as well as a other miscellaneous venom peptides

Probab=96.42  E-value=0.0035  Score=43.41  Aligned_cols=44  Identities=34%  Similarity=0.704  Sum_probs=34.4

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceE-EEEEecCcceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICV-KIIERKGAEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~Cv-KVier~g~~~~itRdClS~~   74 (173)
                      |.||++.+ .  |..        .++||+.+++|. |+....+...+|.|+|.++.
T Consensus         1 ~~C~~~~~-~--~~~--------~~tC~~ge~~Cy~k~~~~~~~~~~~~rGCa~tC   45 (63)
T PF00087_consen    1 RTCYNCPS-S--CFT--------TKTCPEGENICYKKTWMDHPRGMRVERGCAATC   45 (63)
T ss_dssp             -EEEESST-S--STE--------EEEESTTSSEEEEEEEEETSTEEEEEEEEESSS
T ss_pred             CCccCCCC-C--CCc--------ceECCCccCeeEEEEEecCCCCceEecchhccC
Confidence            57888877 4  444        489999999998 66666657889999999876

Most of these toxins act by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and prevent the binding of acetylcholine, thereby blocking the excitation of muscles. Snake toxins are proteins that consist of sixty to seventy five amino acids. Among the invariant residues are eight cysteines all involved in disulphide bonds. The structure is small, disulphide-rich, nearly all beta sheet.; GO: 0005576 extracellular region; PDB: 3NEQ_B 2H5F_A 3PLC_A 1NOR_A 1UG4_A 1FFJ_A 1CCQ_A 1CB9_A 1VB0_A 1ONJ_A ....

>cd00206 snake_toxin Snake toxin domain, present in short and long neurotoxins, cytotoxins and short toxins, and in other miscellaneous venom peptides

Probab=95.98  E-value=0.0079  Score=41.67  Aligned_cols=46  Identities=33%  Similarity=0.579  Sum_probs=33.9

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~~   75 (173)
                      |.||+|.+..  |..        .++||+.+++|.|..... +....|.|+|.++.-
T Consensus         1 ~~C~~~~~~~--~~~--------~~tC~~ge~~Cyk~~~~~~~~g~~i~rGCa~tCP   47 (64)
T cd00206           1 LTCYNCPSPF--PFT--------TETCPDGENICYKKSWKDTPRGVRIERGCAATCP   47 (64)
T ss_pred             CCccCCCCCC--CCc--------ceeCCcccCccceeEEEcCCCCCEEEccccCcCc
Confidence            5688887663  333        489999999999886554 445578899998763

The toxin acts by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and preventing the binding of acetylcholine, thereby blocking the excitation of muscles. This domain contains 60-75 amino acids that are fixed by 4-5 disulfide bridges and is nearly all beta sheet; it exists as either monomers or dimers.

>PF00021 UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor similarity

Probab=95.50  E-value=0.018  Score=37.24  Aligned_cols=43  Identities=23%  Similarity=0.794  Sum_probs=33.8

Q ss_pred             eecccCCC-CCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhh
Q psy5004          22 CYQCVSTQ-PGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLS   72 (173)
Q Consensus        22 CY~C~S~~-PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS   72 (173)
                      ||.|.+.. ..|..+        ++||.+++.|+.+..+..    ....+.|+|..
T Consensus         1 C~~C~~~~~~~C~~~--------~~C~~~~~~C~~~~~~~~~g~~~~~~~~kgC~~   48 (77)
T PF00021_consen    1 CYSCYSPSSSSCSGE--------VTCPGSEDVCYTATVTVTSGGNSVTLVSKGCAT   48 (77)
T ss_dssp             EEEEECSTTTTSCTE--------EEECTTTSEEEEEEEEEETTTCCEEEEEEEEEE
T ss_pred             CCcccCCCCCCCCCC--------CCcCCCCCeeEEEEEEeeecccCceEEEeeccc
Confidence            89999863 369885        699999999987776543    36788899994

; InterPro: IPR001526 CD59 (also called 1F-5Ag, H19, HRF20, MACIF, MIRL, P-18 or protectin) inhibits formation of membrane attack complex (MAC), thus protecting cells from complement mediated lysis. It has a signalling role, as a GPI-anchored molecule, in T cell activation and appears to have some role in cell adhesion through CD2 (controversial). CD59 associates with C9, inhibiting incorporation into C5b-8 preventing terminal steps in polymerisation of the (MAC) in plasma membranes. Genetic defects in GPI-anchor attachment that cause a reduction or loss of both CD59 and CD55 on erythrocytes produce the symptoms of the disease paroxysmal nocturnal haemoglobinuria (PNH). A variety of GPI-linked cell-surface glycoproteins are composed of one or more copies of a conserved domain of about 100 amino-acid residues [], []. Among these proteins, U-PAR contains three tandem copies of the domain, while all the others are made up of a single domain. As shown in the following schematic, this conserved domain contains 10 cysteine residues involved in five disulphide bonds - in U-PAR, the first copy of the domain lacks the fourth disulphide bond. +------+ +------------------------+ +---+ | | | | | | xCxxCxxxxxxCxxxxxCxxxxxCxxxxxxxxxxxxxxxxxxCxxxxCxxxxxxxxxxxxxxCCxxxCxxxxxxxx | | | | +---------------------+ +--------------+ 'C': conserved cysteine involved in a disulphide bond. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/).; PDB: 2I9B_H 1YWH_E 3BT2_U 2FD6_U 3U74_U 3BT1_U 3U73_U 2L03_A 3LAQ_V 2J8B_A ....

>PF06211 BAMBI: BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain; InterPro: IPR009345 This family consists of several eukaryotic BMP and activin membrane-bound inhibitor (BAMBI) proteins

Probab=94.86  E-value=0.031  Score=43.79  Aligned_cols=67  Identities=18%  Similarity=0.582  Sum_probs=47.2

Q ss_pred             HHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCce-EEEEEecCcceeEeechhhhhhhhhhcCCcccccccc
Q psy5004          12 SFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDIC-VKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCR   90 (173)
Q Consensus        12 ~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~C-vKVier~g~~~~itRdClS~~~~~r~dipad~yegcr   90 (173)
                      .++.+ .+++|| |+..+  |..+       +..|-.+-..| -|+..+...++..+++|+-++.        ...+.|.
T Consensus        18 ~lltk-GEIRCY-Cn~P~--CV~T-------GYMCkSel~~CfSklldp~n~nspl~HGCld~~~--------~~~~~C~   78 (107)
T PF06211_consen   18 VLLTK-GEIRCY-CNAPH--CVAT-------GYMCKSELNACFSKLLDPQNTNSPLTHGCLDSLA--------STADICK   78 (107)
T ss_pred             HHHhc-CceEEe-cCCcc--eecc-------cceeccccccceeeccCcccCCCccccccccccc--------CCCCccc
Confidence            34444 459999 87655  9998       67999888899 4565566677889999998773        3456666


Q ss_pred             cCcCCCc
Q psy5004          91 AAAKDPK   97 (173)
Q Consensus        91 ~~a~d~~   97 (173)
                      +....-+
T Consensus        79 ~~~~~~~   85 (107)
T PF06211_consen   79 SEQAQNH   85 (107)
T ss_pred             Ccccccc
Confidence            6544333

Members of the transforming growth factor-beta (TGF-beta) superfamily, including TGF-beta, bone morphogenetic proteins (BMPs), activins and nodals, are vital for regulating growth and differentiation. BAMBI is related to TGF-beta-family type I receptors but lacks an intracellular kinase domain. BAMBI is co-expressed with the ventralising morphogen BMP4 during Xenopus embryogenesis and requires BMP signalling for its expression. The protein stably associates with TGF-beta-family receptors and inhibits BMP and activin as well as TGF-beta signalling [].

>PF01064 Activin_recp: Activin types I and II receptor domain; InterPro: IPR000472 Transforming growth factor-beta (TGF-beta) forms a family with other growth factors described in PDOC00223 from PROSITEDOC

Probab=94.73  E-value=0.031  Score=38.81  Aligned_cols=78  Identities=26%  Similarity=0.534  Sum_probs=56.0

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc--ceeEeechhhhhhhhhhcCCcccccccccCcCCCc
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA--EEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPK   97 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~--~~~itRdClS~~~~~r~dipad~yegcr~~a~d~~   97 (173)
                      |+|| |.+.+  |.++       ..+|.. ...|.+.++....  .++++|+|++    ...+.+.+. ..|...++.  
T Consensus         1 l~C~-C~~~~--C~~~-------n~~C~t-~~~Cf~~~~~~~~~~~~~~~~GC~~----~~~~~~~~~-~~C~~~~~~--   62 (83)
T PF01064_consen    1 LKCY-CDSDD--CNET-------NQTCET-GGFCFTSWEQDNGGGVEIVKKGCWS----NEEDCPLCR-NQCRSSSSP--   62 (83)
T ss_dssp             EEEE-EETTC--HCTT-------TEEEEE-SCEEEEEEEEETTESEEEEEEEEEE----STGGGTTTS-SSEEECSSS--
T ss_pred             CEeE-eCccc--CCCC-------CCEeCC-CCEEEEEEEEeeccceeEEEcCccC----CccCcceec-ceeeccCCC--
Confidence            7899 98877  8865       368876 8899888888766  6899999998    445666666 888884443  


Q ss_pred             chhhhccCCCCccccCceeeccceEEEeeccccccccc
Q psy5004          98 LANYVNHSIPELDVQRPSELKTGYTEEIITRDCLSTVK  135 (173)
Q Consensus        98 l~~Yv~~sike~D~kr~~~~~t~~~~~~~~~~C~s~~~  135 (173)
                                         ....+| |.-+..||+.++
T Consensus        63 -------------------~~~~~C-C~~~D~CN~~~~   80 (83)
T PF01064_consen   63 -------------------SSVVFC-CCSGDFCNSNLS   80 (83)
T ss_dssp             -------------------TCEEEE-EESSTTGGGSEE
T ss_pred             -------------------CCeEEE-CCCCCccCCCCC
Confidence                               112345 445778888765

The receptors for most of the members of this growth factor family are related. These proteins are receptor-type kinases of Ser/Thr type PDOC00100 from PROSITEDOC), which have a single transmembrane domain and a specific hydrophilic Cys-rich ligand-binding domain [, , ]. The C-terminal part of the extracellular domain is conserved. Some of the receptors of this family contain subclass-specific N-terminal extensions of this homology domain. The type I receptors also possess 7 extracellular residues preceding the cysteine box.; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005024 transforming growth factor beta-activated receptor activity, 0016020 membrane; PDB: 3EVS_C 1BTE_A 1LX5_B 2GOO_C 2HLR_A 4FAO_W 2H64_C 2H62_D 1S4Y_C 1NYU_C ....

>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster

Probab=94.46  E-value=0.057  Score=42.46  Aligned_cols=51  Identities=31%  Similarity=0.727  Sum_probs=36.6

Q ss_pred             CceeeecccCCCCCCCCCCCCCccccccCCC--CCCceEEEEEecCcceeEeechhhhhh
Q psy5004          18 SALLCYQCVSTQPGCGTPFKWLWYPSISCPE--EDDICVKIIERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        18 eAL~CY~C~S~~PgC~dpfn~~~~~~etCp~--~~d~CvKVier~g~~~~itRdClS~~~   75 (173)
                      ..|+||+|. ....|..+-   ....+.|+.  ..+.|...+.   ....+.|+|+|+|.
T Consensus        81 ~~~~C~qC~-~~~~C~~~~---~~~~~~C~~~~~~d~Cyt~~~---~~~~~~RGC~s~l~  133 (152)
T PF05444_consen   81 DRLSCYQCT-DDSDCVSSD---SSTAKPCPNYSEDDQCYTRVD---DGGVVERGCLSDLE  133 (152)
T ss_pred             cCCEeeeCC-CCCCCCCCC---CcCcCcCcCCCCCCcCEEEEe---eCCEEEeCCCCccc
Confidence            459999998 666791111   123689986  4899988776   34557899999884

>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster

Probab=93.47  E-value=0.11  Score=40.81  Aligned_cols=49  Identities=33%  Similarity=0.675  Sum_probs=33.8

Q ss_pred             ecccCC-CCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004          23 YQCVST-QPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        23 Y~C~S~-~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~   75 (173)
                      |+|.|. .+.|..+- +.....+.|++..+.|+.++...+.   +.|+|+++|.
T Consensus         1 ~~C~s~~~~~C~~~~-~~~~~~~~C~~~~~~C~t~~~~~~~---~~RGC~~~~~   50 (152)
T PF05444_consen    1 YSCDSCEDPNCTDPD-PSTSATEECPQQDDQCYTRFDDDGT---TIRGCLSDLP   50 (152)
T ss_pred             CCccCCcCCCCCCCC-CCceecccCCCCCCCCEEEEeCCCc---eEcCchhhcc
Confidence            455554 67893322 1233368999998889999976544   6799999884

>PF02988 PLA2_inh: Phospholipase A2 inhibitor; InterPro: IPR004126 Proteins in this entry inhibit basic phospholipase A2 isozymes in snake's venom [, ]

Probab=91.87  E-value=0.27  Score=36.72  Aligned_cols=45  Identities=22%  Similarity=0.640  Sum_probs=33.7

Q ss_pred             eecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec---Ccce-eEeechhhh
Q psy5004          22 CYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK---GAEE-IITRDCLST   73 (173)
Q Consensus        22 CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~---g~~~-~itRdClS~   73 (173)
                      |.-|.+.++.|.-.       .+||..++|.||+++...   |... ++.+.|+++
T Consensus         3 CEvC~~~G~~C~G~-------~~tC~~~eDtC~~~~~E~~~~~~s~~~~~K~C~~S   51 (83)
T PF02988_consen    3 CEVCHGSGKDCSGK-------MKTCEDGEDTCVTVVTEVSSAGVSFRTTHKGCFSS   51 (83)
T ss_pred             cceecCcCCCCCCC-------eeEcCCCCCEEEEEEEEeccCCeEEEEEEecccCc
Confidence            77788888889887       489999999998886543   2222 335888874

; GO: 0004859 phospholipase inhibitor activity, 0005576 extracellular region

>PF06579 Ly-6_related: Caenorhabditis elegans ly-6-related protein; InterPro: IPR010558 This family consists of several Caenorhabditis elegans specific ly-6-related HOT and ODR proteins

Probab=89.02  E-value=0.61  Score=37.17  Aligned_cols=85  Identities=20%  Similarity=0.373  Sum_probs=47.8

Q ss_pred             cccccCCCCCCceEEEEEe---cCc--ceeEeechhhhh--hhhhhcCCcccccccccCcCCCcchhhhccCCCCccccC
Q psy5004          41 YPSISCPEEDDICVKIIER---KGA--EEIITRDCLSTV--KAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR  113 (173)
Q Consensus        41 ~~~etCp~~~d~CvKVier---~g~--~~~itRdClS~~--~~~r~dipad~yegcr~~a~d~~l~~Yv~~sike~D~kr  113 (173)
                      ..++.|   .++||.++|.   .|+  ...+.|||++++  .+|...+=...++. +...++.++.+-+....+..   .
T Consensus        38 i~~~~C---~s~Cvtl~e~~~~~gg~~~~~yIRGC~~~I~~~G~n~t~t~~~~~~-~~~C~~~~~s~Lf~~~~~~~---~  110 (129)
T PF06579_consen   38 IPTVPC---SSICVTLFEPLDIFGGTRGFGYIRGCLDSILRHGFNDTITLSFLDR-RDICRRLRLSQLFPPGRRRE---H  110 (129)
T ss_pred             cceeec---CchheeeEeccccccccccccEEEcCHHHHHHhCCCCchHHHHhcC-CCeeeeccHHHhcCcccccc---c
Confidence            345888   7899999999   233  345569999999  45544322233333 33445666655443332211   0


Q ss_pred             ceeeccceEEEeeccccccc
Q psy5004         114 PSELKTGYTEEIITRDCLST  133 (173)
Q Consensus       114 ~~~~~t~~~~~~~~~~C~s~  133 (173)
                      .--...+.|.|.- ..||++
T Consensus       111 ~~~~~v~vCsC~g-d~CN~s  129 (129)
T PF06579_consen  111 PSDSTVQVCSCYG-DRCNGS  129 (129)
T ss_pred             CCCCeEEEEEECC-CccCCC
Confidence            1112346788864 458764

These proteins are involved in the olfactory system. Odr-2 mutants are known to be defective in the ability to chemotax to odorants that are recognised by the two AWC olfactory neurons. Odr-2 encodes a membrane-associated protein related to the Ly-6 superfamily of GPI-linked signalling proteins [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	173
2j8b_A	79	CD59 glycoprotein; lipid-binding protein, lipid-bi	97.04
3neq_A	66	Muscarinic M1-toxin1, muscarinic toxin 1; chimeric	96.94
2l03_A	74	LY-6/neurotoxin-like protein 1; LYNX1, acetylcholi	96.93
1mr6_A	68	Neurotoxin; venom; NMR {Bungarus multicinctus} SCO	96.67
2jqp_A	65	WEAK toxin 1; protein; NMR {Bungarus candidus}	96.42
1kba_A	66	Kappa-bungarotoxin; 2.30A {Bungarus multicinctus}	96.38
3laq_U	277	UPAR, U-PAR, urokinase plasminogen activator surfa	96.3
1ff4_A	65	Muscarinic toxin/acetylcholine receptor binding P;	96.27
1jgk_A	66	Candoxin; beta sheet, snake venom protein, toxin;	96.26
1hc9_A	74	Alpha-bungarotoxin; toxin/peptide, complex (toxin/	96.21
2fd6_U	276	Urokinase plasminogen activator surface receptor;	96.15
1vyc_A	65	Bucain, neurotoxin; snake neurotoxin; NMR {Bungaru	96.13
2h7z_B	77	Irditoxin subunit B; three-finger toxin, neurotoxi	96.1
1ywh_A	313	Urokinase plasminogen activator surface receptor;	95.99
2h5f_A	77	Denmotoxin; three-finger toxin, neurotoxin, snake	95.82
3hh7_A	65	Muscarinic toxin-like protein 3 homolog; haditoxin	95.61
1cvo_A	62	Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.	95.59
3era_A	62	Erabutoxin A; snake neurotoxin, venom, postsynapti	95.4
1ntn_A	72	Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja	95.34
1f94_A	63	Bucandin; three-finger snake presynaptic neurotoxi	95.31
2l5s_A	88	TGF-beta receptor type-1; ALK5, transforming growt	95.28
2pjy_C	79	TGF-beta receptor type-1; ternary complex, three f	95.21
1vb0_A	61	Cobrotoxin B; short-chain neurotoxin, three-finger	95.18
1lsi_A	66	LSIII; venom, multigene family, neurotoxin; NMR {L	94.95
3vts_A	61	Cytotoxin 1; three finger toxin, venom toxin; 2.43	94.86
2h7z_A	75	Irditoxin subunit A; three-finger toxin, neurotoxi	93.14
2h62_C	129	Bone morphogenetic protein receptor type IA; TGF-b	92.95
3plc_A	63	Beta-cardiotoxin OH-27; beta-sheet, novel cardioto	92.69
1ug4_A	60	Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {	91.65
1ntx_A	60	Alpha-neurotoxin; NMR {Dendroaspis polylepis polyl	90.59
3evs_C	119	Bone morphogenetic protein receptor type-1B; ligan	90.18
1tfs_A	60	Toxin FS2; NMR {Dendroaspis polylepis polylepis} S	88.71
1fas_A	61	Fasciculin 1; toxin; 1.80A {Dendroaspis angusticep	88.37
1ywh_A	313	Urokinase plasminogen activator surface receptor;	88.36
4aea_A	71	Long neurotoxin 1; three-finger toxin, nicotinic a	87.96
3laq_U	277	UPAR, U-PAR, urokinase plasminogen activator surfa	87.22

>2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A

Probab=97.04  E-value=0.00059  Score=47.95  Aligned_cols=41  Identities=24%  Similarity=0.656  Sum_probs=33.5

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLS   72 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS   72 (173)
                      |+||.|......|.++        ++||.++|.|+.+...    ..++|+|++
T Consensus         2 L~Cy~C~~~~~~C~~~--------~~C~~~~d~C~t~~~~----~~~~k~C~~   42 (79)
T 2j8b_A            2 LQCYNCPNPTADCKTA--------VNCSSDFDACLITKAG----LQVYNKCWK   42 (79)
T ss_dssp             CEEECCSSCCTTCCCE--------EECCTTCCEEEEEEET----TEEEEEEEC
T ss_pred             cCCcCCCCCCCCCccc--------eecCCCCCEeEEEEeC----CeeEecccC
Confidence            8999998765579886        7999999999877762    356799997

>3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A

Probab=96.94  E-value=0.00075  Score=45.60  Aligned_cols=45  Identities=29%  Similarity=0.433  Sum_probs=35.9

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~   74 (173)
                      |+||.|.+.+  |..        .++||+.+++|.|...+. +....|+|+|.++.
T Consensus         1 l~C~~~~~~~--~~~--------~~tC~~g~~~C~~~~~~~~~~~~~i~rGCa~~C   46 (66)
T 3neq_A            1 LTCVKSNSIW--FPT--------SEDCPDGQNLCFKRWQYISPRMYDFTRGCAATC   46 (66)
T ss_dssp             CEEEEBCSSS--CCE--------EEECCTTCCEEEEEEEEEETTEEEEEEEEESSC
T ss_pred             CCCccCCCCC--CCc--------ceEcCCCCCEEeEEEEecCCCCCEEeCCCcCcC
Confidence            6899998764  443        489999999999998887 44577899998755

>2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens}

Probab=96.93  E-value=0.00074  Score=45.81  Aligned_cols=48  Identities=19%  Similarity=0.478  Sum_probs=34.4

Q ss_pred             ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004          19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV   74 (173)
Q Consensus        19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~   74 (173)
                      +|+||.|.+..+.|..+        ++||..+++|.++.... .....|.|+|.++.
T Consensus         1 ~L~C~~C~~~~~~c~~~--------~~C~~~~~~C~t~~~~~~~~~~~v~rgC~~~C   49 (74)
T 2l03_A            1 MLDCHVCAYNGDNCFNP--------MRCPAMVAYCMTTRTYYTPTRMKVSKSCVPRC   49 (74)
T ss_dssp             CCEEECEEESSSCCCCE--------EECCTTCCEEEEEEEEEETTEEEEEEEEESCC
T ss_pred             CCEeeECCCCCCcCCCC--------eEcCCCCCEEEEEEEEccCCCceEeccccCcC
Confidence            58999998522347654        79999999998876532 23367889997644

>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1

Probab=96.67  E-value=0.001  Score=45.11  Aligned_cols=46  Identities=30%  Similarity=0.595  Sum_probs=33.8

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcc----eeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAE----EIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~----~~itRdClS~~~   75 (173)
                      |+||.|.|..  |..        .++||+.+++|.|.....+.-    ..|.|+|.++..
T Consensus         1 l~C~~~~~~~--~~~--------~~tCp~g~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp   50 (68)
T 1mr6_A            1 MQCKTCSFYT--CPN--------SETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCP   50 (68)
T ss_dssp             CBCCCCSSSC--CCS--------CCBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSSS
T ss_pred             CCCcCCCCCC--Ccc--------ccEeCCCCCEEEEEEEecccCccccceEeCCccCcCc
Confidence            6899998753  443        489999999999987655321    577899987663

>2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus}

Probab=96.42  E-value=0.0029  Score=43.09  Aligned_cols=45  Identities=27%  Similarity=0.598  Sum_probs=34.9

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~   74 (173)
                      |.||.|.|..  |..        .++||+.+++|.|. .........|.|+|.++.
T Consensus         1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tC   46 (65)
T 2jqp_A            1 LTCLICPEKD--CQK--------VHTCRNEEKICVKRFYDKNQLGWRAQRGCAVSC   46 (65)
T ss_dssp             CEEEECSSSS--CCE--------EEECCSSCCEEEEEEEEETTTEEEEEEEEESCC
T ss_pred             CCCccCCCCC--Ccc--------ceEcCCCcCEEEeeEEEccCCCCEEECCccCcC
Confidence            6899998654  433        58999999999998 665544578999999866

>1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A

Probab=96.38  E-value=0.0023  Score=43.66  Aligned_cols=43  Identities=23%  Similarity=0.509  Sum_probs=33.6

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS~~~   75 (173)
                      |+||.|.+      .+       .+|||+.+++|.|.....+    ...+|+|+|.++..
T Consensus         1 l~C~~~~~------~~-------~~tC~~g~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP   47 (66)
T 1kba_A            1 RTCLISPS------ST-------PQTCPNGQDICFLKAQCDKFCSIRGPVIEQGCVATCP   47 (66)
T ss_dssp             CEEEETTT------TE-------EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSCC
T ss_pred             CCCccCCC------CC-------ccCCCCCcCeEEEEEEeCccccccCCEEeCCccCcCc
Confidence            68998876      11       5899999999999987654    24678999998664

>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}

Probab=96.30  E-value=0.0028  Score=54.31  Aligned_cols=57  Identities=23%  Similarity=0.448  Sum_probs=34.8

Q ss_pred             HHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec---Cc--ceeEeechhh
Q psy5004          12 SFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK---GA--EEIITRDCLS   72 (173)
Q Consensus        12 ~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~---g~--~~~itRdClS   72 (173)
                      ..+..|.+|.||+|.+.+..|...    +...++||.+++.|+.++...   ++  ...+.|+|++
T Consensus        86 ~~f~~G~sL~CysC~~~~~sC~~G----~~~~~tC~~~~d~C~~~vt~~t~~g~~~~~~~~K~C~~  147 (277)
T 3laq_U           86 RAFPQGRYLECASCTSLDQSCERG----REQSLQCRYPTEHCIEVVTLQSTERSLKDEDYTRGCGS  147 (277)
T ss_dssp             -------CCEEECEETTTTCSSSS----CCCEEECSSTTCCEEEEEEEECTTCSCCCCSEEEEEEE
T ss_pred             CCcCCccceEeEeCCCCCCCccCC----CcceeECCCCCCeeeEEEEEEeecCCcccceEEecCCC
Confidence            455668999999999966589631    001589999999998555432   22  2456699964

>1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1

Probab=96.27  E-value=0.0026  Score=43.24  Aligned_cols=46  Identities=24%  Similarity=0.364  Sum_probs=35.0

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~~   75 (173)
                      |.||.|.|..  |..        .++||+.+++|.|. .........|+|+|.++..
T Consensus         1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp   47 (65)
T 1ff4_A            1 LTCVTTKSIG--GVT--------TEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCP   47 (65)
T ss_dssp             CEEEEECTTS--SEE--------EEECCTTCCEEEEEEEESSSSCEEEEEEEESSCC
T ss_pred             CCCccCCCCC--Ccc--------CeEcCCCcCEEeeeEEEecCCCCEEECCccCcCc
Confidence            6899997653  332        58999999999998 6655435789999998663

>1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1

Probab=96.26  E-value=0.0033  Score=43.10  Aligned_cols=48  Identities=21%  Similarity=0.290  Sum_probs=35.4

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~   75 (173)
                      |.||.|.|..|  .      ++..++||+.+++|.|..........|+|+|.++..
T Consensus         1 l~C~~~~s~~~--~------~~~~~tC~~g~~~Cyk~~~~~~~g~~i~rGCaatCP   48 (66)
T 1jgk_A            1 MKCKICNFDTC--R------AGELKVCASGEKYCFKESWREARGTRIERGCAATCP   48 (66)
T ss_dssp             CEEEECCTTSC--S------CCEEEECCSSSCEEEEEEECCSSCCEEECCEESCCC
T ss_pred             CCCccCCCCCC--c------CCCeeECCCCcCEEeeeEEeCCCCCEEECCccCcCc
Confidence            67998876642  2      112589999999999987665434789999998663

>1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ...

Probab=96.21  E-value=0.0035  Score=43.62  Aligned_cols=44  Identities=14%  Similarity=0.459  Sum_probs=33.5

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc----ceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA----EEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~----~~~itRdClS~~   74 (173)
                      |+||.|.+ .  |..        .++||+.+++|.|.....+.    ...|+|+|.++.
T Consensus         1 l~C~~~~~-~--~~~--------~~tCp~g~~~Cyk~~~~~~~~~~~g~~i~rGCa~tC   48 (74)
T 1hc9_A            1 IVCHTTAT-S--PIS--------AVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATC   48 (74)
T ss_dssp             CEEEETTS-S--SCE--------EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred             CCCccCCC-C--Ccc--------ceEeCCCcCEEEeEEEECccccccCCEEeCCccCcC
Confidence            68999976 2  322        58999999999999876542    367889998865

>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*

Probab=96.15  E-value=0.0026  Score=54.54  Aligned_cols=58  Identities=22%  Similarity=0.488  Sum_probs=33.8

Q ss_pred             HHHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEE---ec---C--cceeEeechhh
Q psy5004          11 ISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIE---RK---G--AEEIITRDCLS   72 (173)
Q Consensus        11 l~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVie---r~---g--~~~~itRdClS   72 (173)
                      +.++..|.+|.||+|.+.+..|-..    +....+||..++.|+.+..   ..   +  ....+.|+|++
T Consensus        85 ~v~~~~g~sLsC~sC~~~~~scc~g----~~~s~tCp~~~d~Cvt~~~~~s~a~~~g~~~~~~~~KgC~~  150 (276)
T 2fd6_U           85 AVTYSRSRYLECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY  150 (276)
T ss_dssp             --------CCEEEEEETTTTTTTTT----CCEEEECSSTTCEEEEEEEEC----------CCSEEEEEEE
T ss_pred             ceeecccCCcCCccCCCCCCccccC----CCcccCCCCCCCEEEEEEEeeeeecccCccceeeEecCCCC
Confidence            4566679999999999987655332    0115899998889998876   32   2  22346799954

>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A

Probab=96.13  E-value=0.0028  Score=43.17  Aligned_cols=46  Identities=22%  Similarity=0.381  Sum_probs=34.4

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~~   75 (173)
                      |.||.|.|..  |..        .++||+.+++|.|. .........|.|+|.++..
T Consensus         1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCP   47 (65)
T 1vyc_A            1 RKCLIKYSQA--NES--------SKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATCP   47 (65)
T ss_dssp             CEEEECCTTS--CCE--------EEECCTTCCEEEEEECCSSSSCCCEEEEEESSCC
T ss_pred             CCCccCCCCC--Ccc--------ceEcCCCcCEEEeeEEEecCCCCEEECCccCcCc
Confidence            6899998654  333        58999999999998 5544334778999998663

>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1

Probab=96.10  E-value=0.0075  Score=42.32  Aligned_cols=49  Identities=22%  Similarity=0.529  Sum_probs=36.1

Q ss_pred             cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecC-ccee-Eeechhhhh
Q psy5004          17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEI-ITRDCLSTV   74 (173)
Q Consensus        17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~-itRdClS~~   74 (173)
                      +-| .||+|++... .|..        .++||+.+++|.|...... ...+ |.|+|.++.
T Consensus         6 ~~~-~C~~C~~~~s~~c~~--------~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tC   57 (77)
T 2h7z_B            6 PYT-LCFECNRETCSNCFK--------DNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTC   57 (77)
T ss_dssp             SCC-EECCEETTTCCSCSS--------CEECCTTCCEEEEEEEECSSSCEEEEEEEEESSC
T ss_pred             CCC-ccccCCCCccCCCcc--------CcCcCCCcCEEeEEEEecCCCCceeEeCCcCCcC
Confidence            345 9999998643 4653        4899999999999877663 2234 889997765

>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3

Probab=95.99  E-value=0.0026  Score=55.57  Aligned_cols=58  Identities=22%  Similarity=0.428  Sum_probs=36.7

Q ss_pred             HHHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec------Ccce--eEeechhh
Q psy5004          11 ISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK------GAEE--IITRDCLS   72 (173)
Q Consensus        11 l~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~------g~~~--~itRdClS   72 (173)
                      +.++..|.+|.||+|.+.+..|...    +....+||..++.|+.+....      |...  .+.|+|++
T Consensus        84 ~~~~a~g~sLsCysC~~~~~sC~~g----~~~s~tCp~~~d~Cvt~~~~~s~~~~~g~~~~~~~~KgC~~  149 (313)
T 1ywh_A           84 AVTYSRSRYLECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY  149 (313)
T ss_dssp             ------CCCSEEECBCSSSSCHHHH----TTCEEECSSTTCEEEEEEEEECC-----CCSCCEEEEEEEE
T ss_pred             ceeeccccccCCccCCCCCCCcccC----CCcccCCCCCCCEEEEEEEeeeeeccCCccccceEecCCCC
Confidence            4566779999999999987766331    001589999999998887622      2122  67899954

>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1

Probab=95.82  E-value=0.004  Score=43.75  Aligned_cols=49  Identities=14%  Similarity=0.346  Sum_probs=36.7

Q ss_pred             cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecCc--ceeEeechhhhh
Q psy5004          17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKGA--EEIITRDCLSTV   74 (173)
Q Consensus        17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g~--~~~itRdClS~~   74 (173)
                      +-| .||+|+.... .|..        .++||+.+++|.|.......  ...|.|+|.++.
T Consensus         6 ~~~-~C~~C~~~~s~~c~~--------~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tC   57 (77)
T 2h5f_A            6 PHG-FCIQCNRKTWSNCSI--------GHRCLPYHMTCYTLYKPDENGEMKWAVKGCARMC   57 (77)
T ss_dssp             CEE-EEECEESSSSSCTTS--------EEEEEETCCEEEEEEECCSSSCCEEEEEEEESSC
T ss_pred             CCC-ccccCCCCcCCCCcc--------ccEeCCCcCEEeeEEEeCCCCCccEEECCccCcC
Confidence            345 9999998653 4543        48999999999998776542  267899997765

>3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0

Probab=95.61  E-value=0.016  Score=39.57  Aligned_cols=45  Identities=33%  Similarity=0.536  Sum_probs=34.7

Q ss_pred             eeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004          21 LCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        21 ~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~   75 (173)
                      .||.+.|.+|  . +       .++||+.+++|.|...+.+....|+|+|.++..
T Consensus         2 ~C~~~~~~~~--~-t-------~~tC~~g~~~Cyk~~~~~~~g~~i~rGCaatCp   46 (65)
T 3hh7_A            2 KCYNHQSTTP--E-T-------TEICPDSGYFCYKSSWIDGREGRIERGCTFTCP   46 (65)
T ss_dssp             EEECCCTTSC--C-C-------EEECSSTTCEEEEEEEEETTEEEEEEEEESSCC
T ss_pred             CcccCCcCCC--C-c-------ceECCCCCCeEeEEEEecCCCCEEeCcccCcCc
Confidence            5777765543  1 1       589999999999999888666788999987653

>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A

Probab=95.59  E-value=0.011  Score=39.84  Aligned_cols=44  Identities=23%  Similarity=0.342  Sum_probs=32.4

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC-cceeEeechhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEIITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~itRdClS~~~   75 (173)
                      |.||.|.    .|..        .++||+.+++|.|.....+ ....|.|+|.++..
T Consensus         1 l~C~~~~----~~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp   45 (62)
T 1cvo_A            1 LKCHNTQ----LPFI--------YKTCPEGKNLCFKATLKKFPLKFPVKRGCADNCP   45 (62)
T ss_dssp             CEECSCC----SSSC--------CEECCTTCCEEEEEEETTSSSCCCEEEEEESSCC
T ss_pred             CCccCCC----CCCc--------CeEcCCCcCEEeeeEEeCCCCCcEEeCCccCcCc
Confidence            5788775    2322        4899999999999876644 34678999988663

>3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A

Probab=95.40  E-value=0.022  Score=38.66  Aligned_cols=41  Identities=22%  Similarity=0.430  Sum_probs=31.5

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC   70 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC   70 (173)
                      |.||.+.|.+  +..        +++||+.+++|.|..........|.|+|
T Consensus         1 l~C~~~~~~~--~~~--------t~tC~~g~~~Cyk~~~~~~~g~~i~rGC   41 (62)
T 3era_A            1 RICFNHQTSQ--PQT--------TKTCSPGESSCYNKQWSDFRGTIIERGC   41 (62)
T ss_dssp             CEEECCCTTS--CCC--------EEECCTTCCCEEEEEEEETTEEEEEEEE
T ss_pred             CCccCCCCCC--CCC--------ceECCCCcCeeeeeEEeCCCCCEEeeeC
Confidence            6788887654  332        4899999999999877765455788999

>1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A

Probab=95.34  E-value=0.012  Score=40.83  Aligned_cols=42  Identities=19%  Similarity=0.440  Sum_probs=31.9

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc----ceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA----EEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~----~~~itRdClS~~   74 (173)
                      |+||.|.     +   +.     .++||+.+++|.|.....+.    ...|+|+|.++.
T Consensus         1 l~C~~~~-----~---~~-----~~tC~~g~~~Cyk~~~~~~~~~~~g~~i~rGCaatC   46 (72)
T 1ntn_A            1 ITCYKTP-----I---IT-----SETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATC   46 (72)
T ss_dssp             CEEEETT-----T---TE-----EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred             CCCccCC-----C---CC-----CeEeCCCcCeEEeEEEecccccccCCeEeCCccCcC
Confidence            6899885     2   11     58999999999999876542    367889999865

>1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A

Probab=95.31  E-value=0.0027  Score=43.29  Aligned_cols=42  Identities=29%  Similarity=0.720  Sum_probs=32.3

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEee--chhhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITR--DCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itR--dClS~~~   75 (173)
                      |.||.|.|.+  |..        .++||+.+++|.|...+    .+|+|  +|.++..
T Consensus         1 l~C~~~~~~~--~~~--------~~tC~~g~~~Cyk~~~~----~~i~r~~GCaatCp   44 (63)
T 1f94_A            1 MECYRCGVSG--CHL--------KITCSAEETFCYKWLNK----ISNERWLGCAKTCT   44 (63)
T ss_dssp             CEEEEEETTE--EEE--------EEECCTTCCEEEEEEET----TTCCEEEEEESCCC
T ss_pred             CCCccCCCCC--Ccc--------ccCcCCCcCEEeeeEEE----eEEEEcCCccCcCc
Confidence            6799998654  322        58999999999998765    66789  9987653

>2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens}

Probab=95.28  E-value=0.029  Score=40.41  Aligned_cols=62  Identities=26%  Similarity=0.553  Sum_probs=45.8

Q ss_pred             ccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCcccccccccCcC
Q psy5004          16 RCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAK   94 (173)
Q Consensus        16 ~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegcr~~a~   94 (173)
                      |+.+|+|| |.    .|.++ |      .||.. +-.|.+.+++..+.+.++|+||+.    ..-+|...---|+.+..
T Consensus         2 ~~~~l~C~-C~----~C~~~-n------~tC~t-~g~Cf~sv~~~~g~~~~~~gC~~~----~e~~p~~~~~~C~~~~~   63 (88)
T 2l5s_A            2 SATALQCF-CH----LCTKD-N------FTCVT-DGLCFVSVTETTDKVIHNSMCIAE----IDLIPRDRPFVCAPSSK   63 (88)
T ss_dssp             CTTSEEEE-CS----SCTTT-T------TEEEE-SSEEEEEEEECSSCEEEEEEEECG----GGCSSSSSCGGGCSCCC
T ss_pred             CceeEEEE-CC----CCCCC-C------CEEec-CCEEeEEEEECCCCEEEEECCCCh----hhcCCCCCceEecCCCC
Confidence            67899999 94    38765 3      58854 589999888888888999999983    23466655556876554

>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I

Probab=95.21  E-value=0.013  Score=41.53  Aligned_cols=59  Identities=27%  Similarity=0.622  Sum_probs=43.7

Q ss_pred             ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCcccccccccCcC
Q psy5004          19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAK   94 (173)
Q Consensus        19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegcr~~a~   94 (173)
                      ||+|| |.    .|.++ |      .||.. +..|.+.+++..+.+.++|+||+.-    .-+|...--.|+.+..
T Consensus         1 ~LkC~-C~----~C~~~-n------~tC~t-~g~Cf~sv~~~~g~~~~~~gC~~~~----e~~p~~~~~~C~~~~~   59 (79)
T 2pjy_C            1 ALQCF-CH----LCTKD-N------FTCVT-DGLCFVSVTETTDKVIHNSSCIAEI----DLIPRDRPFVCAPSSK   59 (79)
T ss_dssp             CEEEE-CT----TCTTT-T------TEEEE-SSEEEEEEECSSSCCEEEEEEECTT----TSSSSSSCGGGCCHHH
T ss_pred             CcEEE-CC----CCCCC-C------CEEcC-CCEEeEEEEECCCCEEEEECCCChh----HcCCCCCCcEeCCCCC
Confidence            69999 95    38776 3      68844 6999999988888999999999832    2456555556876543

>1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A

Probab=95.18  E-value=0.027  Score=38.17  Aligned_cols=41  Identities=29%  Similarity=0.401  Sum_probs=31.0

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCL   71 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdCl   71 (173)
                      |.||.+.|..|  ..        ++|||+ +++|-|..........|.|+|.
T Consensus         1 l~C~~~~~~~~--~~--------~~tC~~-~~~Cyk~~~~~~~g~~i~rGCa   41 (61)
T 1vb0_A            1 LECHNQQSSQT--PT--------TKTCSG-ETNCYKKWWSDHRGTIIERGCG   41 (61)
T ss_dssp             CEEECCCTTSC--CC--------EEECSS-CSCEEEEEEEETTEEEEEEEES
T ss_pred             CEeeCCCCCCC--cc--------ccCCCC-cCeeEeeEEcCCCCCEEeeeCc
Confidence            57888876653  22        589999 9999998776543477889996

>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1

Probab=94.95  E-value=0.012  Score=40.14  Aligned_cols=33  Identities=18%  Similarity=0.401  Sum_probs=25.9

Q ss_pred             cccCCCCCCceEEEEEecCc----ceeEeechhhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGA----EEIITRDCLSTVK   75 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~----~~~itRdClS~~~   75 (173)
                      .++||+.+++|.|.....+.    ...|+|+|.++..
T Consensus        10 ~~tC~~g~~~Cyk~~~~~~~~~~rg~~i~rGCa~tCP   46 (66)
T 1lsi_A           10 TQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATCP   46 (66)
T ss_dssp             CCCCCSSCCEEEEEECCCTTCTTSCCCCEEEEESSCC
T ss_pred             ccCCCCCcCEEEEEEEECccccccCcEEeCCccCcCc
Confidence            58999999999998776542    3678899987653

>3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus}

Probab=94.86  E-value=0.023  Score=39.44  Aligned_cols=32  Identities=31%  Similarity=0.585  Sum_probs=28.3

Q ss_pred             cccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGAEEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~   74 (173)
                      .+|||+.+++|.|..........|+|+|..+.
T Consensus        12 ~~tCp~GqnlCykk~~~~~~g~~i~rGCaatC   43 (61)
T 3vts_A           12 SKTCPEGKNLCYKMTLMKMPKIPIKRGCTDAC   43 (61)
T ss_dssp             EEECCTTCCEEEEEEETTEEEEEEEEEEESSC
T ss_pred             ceeCCCCCceEEeEEEecCCCCeEEeceeCcC
Confidence            59999999999999988777788999998765

>2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1

Probab=93.14  E-value=0.082  Score=37.19  Aligned_cols=46  Identities=22%  Similarity=0.582  Sum_probs=34.4

Q ss_pred             eeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecC-ccee-Eeechhhhhh
Q psy5004          20 LLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEI-ITRDCLSTVK   75 (173)
Q Consensus        20 L~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~-itRdClS~~~   75 (173)
                      -.||+|+.... .|..        .++|  .+++|.|.....+ ...+ |+|+|.++..
T Consensus         8 ~~C~~C~~~~s~~~~~--------~~tC--ge~~Cyk~~~~~~~~g~~~i~rGCaatCP   56 (75)
T 2h7z_A            8 TLCFECNRMTSSDCST--------ALRC--YRGSCYTLYRPDENCELKWAVKGCAETCP   56 (75)
T ss_dssp             EEEECEETTTCCCTTC--------EEEE--CSSEEEEEEEECTTSCEEEEEEEEESSCC
T ss_pred             CcccCCCCcccCCCCc--------cCCc--CCCEeEeEEEeCCCCCceeEeCCccCcCc
Confidence            48999988754 3443        4899  9999999887663 3455 8999998663

>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B

Probab=92.95  E-value=0.077  Score=40.66  Aligned_cols=45  Identities=27%  Similarity=0.645  Sum_probs=32.4

Q ss_pred             CceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC-cceeEeechhh
Q psy5004          18 SALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEIITRDCLS   72 (173)
Q Consensus        18 eAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~itRdClS   72 (173)
                      .+|+|| |..   .|.++..     ..||-. +-.|.+.+++.. +.+.++|+|++
T Consensus        34 ~~l~C~-C~~---~C~~~~~-----n~tC~t-~g~Cf~sv~~~~~G~~~~~~GCl~   79 (129)
T 2h62_C           34 PFLKCY-CSG---HCPDDAI-----NNTCIT-NGHCFAIIEEDDQGETTLASGCMK   79 (129)
T ss_dssp             CCEEEE-CBB---SCCTTCB-----TTEEEE-SSEEEEEEEECSSSCEEEEEEEEC
T ss_pred             ccEEEE-eCC---CcCCCcc-----Ccceec-CCeEeEEEEEcCCCCEEEEeCCcC
Confidence            379999 953   3765311     258843 689988887554 78899999998

>3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1

Probab=92.69  E-value=0.056  Score=36.25  Aligned_cols=33  Identities=27%  Similarity=0.524  Sum_probs=22.4

Q ss_pred             cccCCCCCCceEEEEEecCcc-eeEeechhhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGAE-EIITRDCLSTVK   75 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~~-~~itRdClS~~~   75 (173)
                      .++||+.+++|.|...+.+.. ..|+|+|.++..
T Consensus        12 ~~tC~~g~~~Cyk~~~~~~~~~~~i~rGCa~tCp   45 (63)
T 3plc_A           12 YTTCPIGQDKCVKMTIKKLPSKYDVIRGCIDICP   45 (63)
T ss_dssp             EEECCTTCCEEEEEC--------CCEEEEESSCC
T ss_pred             eeECCCCcCeEeEEEEecCCCCEEEeCCccCcCC
Confidence            589999999999998876543 358899987653

>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...

Probab=91.65  E-value=0.12  Score=34.51  Aligned_cols=33  Identities=15%  Similarity=0.470  Sum_probs=26.6

Q ss_pred             cccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGAEEIITRDCLSTVK   75 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~~   75 (173)
                      .++||+.+++|.|..........|.|+|.++..
T Consensus        11 ~~tC~~g~~~Cyk~~~~~~~g~~i~rGCa~tCP   43 (60)
T 1ug4_A           11 YKTCAAGKNLCYKMFMVAAPKVPVKRGCIDVCP   43 (60)
T ss_dssp             EEECCTTCCEEEEEEETTEEEEEEEEEEESSCC
T ss_pred             CEEcCCCcCeEeeeEEecCCCCEEECCccCcCc
Confidence            589999999999987655434789999988663

>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1

Probab=90.59  E-value=0.39  Score=32.32  Aligned_cols=40  Identities=38%  Similarity=0.609  Sum_probs=29.8

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCL   71 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdCl   71 (173)
                      |.||.+.|..|  ..        +++|  .+++|-|..........|.|+|.
T Consensus         1 l~C~~~~~~~~--~~--------~~tC--g~~~Cyk~~~~~~~g~~i~rGCa   40 (60)
T 1ntx_A            1 RICYNHQSTTR--AT--------TKSC--EENSCYKKYWRDHRGTIIERGCG   40 (60)
T ss_dssp             CEEECCCTTSC--CC--------EEEC--SCSCEEEEEEECSSSEEEEEEES
T ss_pred             CEeeCCCCCCC--Cc--------cCCC--CCcEeEeeEEcCCCCCEEeeECc
Confidence            57888876653  22        5899  99999998776543477889996

>3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus}

Probab=90.18  E-value=0.25  Score=37.32  Aligned_cols=48  Identities=27%  Similarity=0.598  Sum_probs=31.9

Q ss_pred             hccCceeeecccCCCCCCCCC-CCCCccccccCCCCCCceEEEEEe-cCcceeEeechhhh
Q psy5004          15 SRCSALLCYQCVSTQPGCGTP-FKWLWYPSISCPEEDDICVKIIER-KGAEEIITRDCLST   73 (173)
Q Consensus        15 ~~geAL~CY~C~S~~PgC~dp-fn~~~~~~etCp~~~d~CvKVier-~g~~~~itRdClS~   73 (173)
                      ....+|+|| |..   .|.++ +|      .||- .+..|.+.++. ..+++.++|+|++.
T Consensus        18 ~~~~~L~C~-C~~---~C~~~~~n------~tC~-t~g~Cf~sv~~~~~G~~~~~~GCl~~   67 (119)
T 3evs_C           18 PRPKILRCK-CHH---HCPEDSVN------NICS-TDGYCFTMIEEDDSGMPVVTSGCLGL   67 (119)
T ss_dssp             ----CEEEE-CSS---SCCTTSCT------TEEE-ESSEEEEEEEECTTCSEEEEEEEECS
T ss_pred             ccCCCEEee-eCC---CcCCCCcC------Ceec-cCCEEEEEEEEcCCCcEEEEEcCCcc
Confidence            345779999 943   48764 22      4783 36899887765 45678889999983

>1tfs_A Toxin FS2; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1

Probab=88.71  E-value=0.39  Score=32.23  Aligned_cols=39  Identities=28%  Similarity=0.655  Sum_probs=28.7

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC   70 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC   70 (173)
                      |.||.+.|..|  ..        .++|  .+++|-|..........|.|+|
T Consensus         1 l~C~~~~~~~~--~~--------~~tC--g~~~Cyk~~~~~~~g~~i~rGC   39 (60)
T 1tfs_A            1 RICYSHKASLP--RA--------TKTC--VENTCYKMFIRTHREYISERGC   39 (60)
T ss_dssp             CEEECCSSSSS--CC--------EEEC--SCSEEEEEEETTEEEEEEEEEE
T ss_pred             CEeeCCCCCCC--Cc--------cCCc--CCcEeeeeEEcCCCCCEEeeec
Confidence            57888876653  22        5899  9999999876543237789999

>1fas_A Fasciculin 1; toxin; 1.80A {Dendroaspis angusticeps} SCOP: g.7.1.1 PDB: 1fsc_A 1f8u_B* 1b41_B 1fss_B* 1ku6_B* 1mah_F* 2x8b_B* 1qm7_A

Probab=88.37  E-value=0.57  Score=31.73  Aligned_cols=39  Identities=21%  Similarity=0.589  Sum_probs=29.2

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC   70 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC   70 (173)
                      |.||.+.|..|  ..        +++|  .+++|-|..........|.|+|
T Consensus         1 l~C~~~~~~~~--~~--------~~tC--G~~~Cyk~~~~~~~g~~i~RGC   39 (61)
T 1fas_A            1 TMCYSHTTTSR--AI--------LTNC--GENSCYRKSRRHPPKMVLGRGC   39 (61)
T ss_dssp             CEEECSSSSCS--SC--------EEEC--TTSCEEEEEESSSSCCEEEEEE
T ss_pred             CEeeCCCCCCC--Cc--------cCCC--CCcCCeeeEEcCCCCCEEeeeC
Confidence            57888876653  22        5899  9999999877654347889999

>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3

Probab=88.36  E-value=0.2  Score=43.76  Aligned_cols=51  Identities=20%  Similarity=0.492  Sum_probs=38.7

Q ss_pred             CceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEec--CcceeEeechhh
Q psy5004          18 SALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERK--GAEEIITRDCLS   72 (173)
Q Consensus        18 eAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~--g~~~~itRdClS   72 (173)
                      .+|+||.|.+... .|...-    .....|.++++.|+.++...  +....+.|+|.+
T Consensus       190 NGL~CysC~~~~s~~Cs~e~----~~~v~CtG~En~Clt~~g~~g~~~~~~~~KGCas  243 (313)
T 1ywh_A          190 NGRQCYSCKGQSTHGCSSEE----TFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCAT  243 (313)
T ss_dssp             EEEEEEEEEEBTTTBSSGGG----CEEEEEETTCCEEEEEEECCSSSSCCEEEEEEEC
T ss_pred             CCCCCCCcccCCCCCCCCCC----ccceecCCCCCcceeeEeeeccCCceEEeccCCC
Confidence            6899999998765 487431    00379999999999998864  334567899997

>4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A

Probab=87.96  E-value=0.39  Score=33.28  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=24.1

Q ss_pred             cccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERKG----AEEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g----~~~~itRdClS~~   74 (173)
                      .++||+. ++|.|.....+    ....|+|+|.++.
T Consensus        11 ~~tC~~g-~~Cyk~~~~~~~~~~~g~~i~rGCaatC   45 (71)
T 4aea_A           11 SKDCPNG-HVCYTKTWCDAFCSIRGKRVDLGCAATC   45 (71)
T ss_dssp             CBCCTTC-CEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred             eeECCCC-CeEeEEEEecccccCCCcEEeCcccCcC
Confidence            5899999 99999877653    2356789998755

>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}

Probab=87.22  E-value=0.35  Score=41.32  Aligned_cols=52  Identities=21%  Similarity=0.537  Sum_probs=36.5

Q ss_pred             cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEE--EecCcceeEeechhh
Q psy5004          17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKII--ERKGAEEIITRDCLS   72 (173)
Q Consensus        17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVi--er~g~~~~itRdClS   72 (173)
                      ...|+||.|.+..+ .|...-    .....|+++++.|+..+  ...+....+.|+|.+
T Consensus       187 pNGl~C~sC~~~~~~~C~~~~----~~~~~C~G~et~C~~~~g~~~~g~~~~~~kGCat  241 (277)
T 3laq_U          187 PNGFQCYSCEGNNTLGCSSEE----ASLINCRGPMNQCLVATGLDVLGNRSYTVRGCAT  241 (277)
T ss_dssp             CCSCEEEEBCSSSSSSSSSSS----CEEEECCTTCCEEEEECCC-----CCCCEEEEEC
T ss_pred             CcccCCCCcccCCCCCCCCCC----CcceEcCCCCCcceEEEeEEecCceeEEecCCCC
Confidence            46899999999866 698641    01379999999998765  223455677899996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	173
d1ff4a_	65	Muscarinic toxin {Green mamba (Dendroaspis angusti	94.7
d1mr6a_	68	Bungarotoxin {Many-banded krait (Bungarus multicin	94.46
d2j8ba1	77	CD59 {Human (Homo sapiens) [TaxId: 9606]}	92.99
d1kxia_	62	Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxI	92.94
d1jgka_	66	Candoxin {Malayan krait (Bungarus candidus) [TaxId	91.56
d2h62c1	84	BMP receptor Ia ectodomain {Human (Homo sapiens) [	90.0
d2h8ua1	65	Bucain {Malaysian krait (Bungarus candidus) [TaxId	89.73
d1tgxa_	60	gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId	89.53
d2fd6u3	97	Urokinase plasminogen activator surface receptor,	88.82
d1hc9a_	74	Bungarotoxin {Many-banded krait (Bungarus multicin	86.47
d1ntna_	72	Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 865	86.04
d2fd6u2	87	Urokinase plasminogen activator surface receptor,	83.42
d1v6pa_	62	Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra)	83.29

>d1ff4a_ g.7.1.1 (A:) Muscarinic toxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Muscarinic toxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]

Probab=94.70  E-value=0.011  Score=39.87  Aligned_cols=45  Identities=24%  Similarity=0.403  Sum_probs=34.1

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEe-cCcceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIER-KGAEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier-~g~~~~itRdClS~~   74 (173)
                      |.|+.|.|.+  |..        ++|||+.+++|.|.... .+.-..|+|+|.-+.
T Consensus         1 ltC~~~~s~~--~~t--------~~tCp~GqnlCykk~~~~~~~g~~i~rGCaaTC   46 (65)
T d1ff4a_           1 LTCVTTKSIG--GVT--------TEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATC   46 (65)
T ss_dssp             CEEEEECTTS--SEE--------EEECCTTCCEEEEEEEESSSSCEEEEEEEESSC
T ss_pred             CeeecCCCcc--CCc--------cccCCCccceeeEEEEecCCCCCEEEeeeeCcC
Confidence            5688888876  333        49999999999998744 445566999998654

>d1mr6a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bungarotoxin
species: Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]

Probab=94.46  E-value=0.013  Score=39.80  Aligned_cols=45  Identities=29%  Similarity=0.620  Sum_probs=33.3

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS~~   74 (173)
                      |.|+.|.+..  |..+        +|||+.+++|.|..-...    -...|+|+|..+.
T Consensus         1 l~C~tC~~~~--c~~~--------etCp~GqnlCykk~w~~~~~~~~g~~i~rGCaaTC   49 (68)
T d1mr6a_           1 MQCKTCSFYT--CPNS--------ETCPDGKNICVKRSWTAVRGDGPKREIRRECAATC   49 (68)
T ss_dssp             CBCCCCSSSC--CCSC--------CBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSS
T ss_pred             CceEeCCCcc--CCCc--------ccCCCCCCeEEeEEeeccccccCCCcEecceeCcC
Confidence            6799998776  5553        899999999998864322    2346789998765

>d2j8ba1 g.7.1.3 (A:1-77) CD59 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: CD59
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.05  Score=37.72  Aligned_cols=59  Identities=24%  Similarity=0.562  Sum_probs=40.5

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhh------hhhhhhhcCCcccccccc
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLS------TVKAFRTDIPADRYEGCR   90 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS------~~~~~r~dipad~yegcr   90 (173)
                      |+||+|.-.+.+|...        ++|+.+.|.|-.+ + +|++..  |+|..      +..+-+-.++.-+|.=|.
T Consensus         1 L~CY~C~d~t~~C~t~--------~~C~~~~DaCL~~-~-~g~~~y--~qCwk~sDC~~~~is~~f~~~~f~y~CC~   65 (77)
T d2j8ba1           1 LQCYNCPNPTADCKTA--------VNCSSDFDACLIT-K-AGLQVY--NKCWKFEHCNFNDVTTRLRENELTYYCCK   65 (77)
T ss_dssp             CEEECCSSCCTTCCCE--------EECCTTCCEEEEE-E-ETTEEE--EEEECGGGCSHHHHHHHHTCSSCEEEEEC
T ss_pred             CcccccCCCCCccccc--------cccCCCCCeeEEE-e-eCCeEE--eeeEeccCCCHHHHHHHhcccCceeeccC
Confidence            7899997556689986        7999999999855 3 466544  67643      222334467777776554

>d1kxia_ g.7.1.1 (A:) Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxId: 8656]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Cardiotoxin V
species: Taiwan cobra (Naja naja atra) [TaxId: 8656]

Probab=92.94  E-value=0.04  Score=36.77  Aligned_cols=32  Identities=25%  Similarity=0.527  Sum_probs=26.0

Q ss_pred             cccCCCCCCceEEEEEecCc-ceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGA-EEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~-~~~itRdClS~~   74 (173)
                      .+|||+.+++|.|....... ...|.|+|.-+.
T Consensus        12 ~~tCp~GqnlCyK~~~~~~~~~~~v~RGCaatC   44 (62)
T d1kxia_          12 YKTCPEGKNLCFKATLKKFPLKFPVKRGCADNC   44 (62)
T ss_dssp             EEECCTTCCEEEEEEESSSCCCSCSEEEEESSC
T ss_pred             cccCCCCcceEEEEeeccCcCCceeeeeeeccC
Confidence            48999999999999887543 577789998654

>d1jgka_ g.7.1.1 (A:) Candoxin {Malayan krait (Bungarus candidus) [TaxId: 92438]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Candoxin
species: Malayan krait (Bungarus candidus) [TaxId: 92438]

Probab=91.56  E-value=0.095  Score=35.30  Aligned_cols=47  Identities=23%  Similarity=0.426  Sum_probs=35.4

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTV   74 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~   74 (173)
                      |.|-.|+-..  |.+.-      .+|||..+++|.|-....+--.+|+|+|.-+.
T Consensus         1 l~C~~C~~~t--~~~~~------~~tCp~Ge~~Cykk~w~d~rG~rierGCaATC   47 (66)
T d1jgka_           1 MKCKICNFDT--CRAGE------LKVCASGEKYCFKESWREARGTRIERGCAATC   47 (66)
T ss_dssp             CEEEECCTTS--CSCCE------EEECCSSSCEEEEEEECCSSCCEEECCEESCC
T ss_pred             CeeEeCCCcc--CCCCc------cccCCCCCCeEeeeEeecCCCCEEEccEeccC
Confidence            4677775554  33221      58999999999988888777788999998765

>d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: BMP receptor Ia ectodomain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.00  E-value=0.13  Score=34.80  Aligned_cols=44  Identities=27%  Similarity=0.622  Sum_probs=31.7

Q ss_pred             ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhh
Q psy5004          19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLS   72 (173)
Q Consensus        19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS   72 (173)
                      -|+|| |...-|.+..+        .||- .+..|.+.+++. .+.+.++++||+
T Consensus         2 ~L~C~-C~~~C~~~~~N--------~TC~-t~g~Cf~s~~~~~~g~~~~~~GCl~   46 (84)
T d2h62c1           2 FLKCY-CSGHCPDDAIN--------NTCI-TNGHCFAIIEEDDQGETTLASGCMK   46 (84)
T ss_dssp             CEEEE-CBBSCCTTCBT--------TEEE-ESSEEEEEEEECSSSCEEEEEEEEC
T ss_pred             CeEEE-eCCCCCCCCcC--------CeEe-CCCEEeEEEEEcCCCcEEEEEcCCC
Confidence            48999 95444444444        3783 478899888775 567889999986

>d2h8ua1 g.7.1.1 (A:1-65) Bucain {Malaysian krait (Bungarus candidus) [TaxId: 92438]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bucain
species: Malaysian krait (Bungarus candidus) [TaxId: 92438]

Probab=89.73  E-value=0.075  Score=35.60  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=32.1

Q ss_pred             eeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004          21 LCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV   74 (173)
Q Consensus        21 ~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~   74 (173)
                      +|+.|.|..  +..        ++|||+.+++|.|.-... ..-..|+|+|.-+.
T Consensus         2 ~C~~~~s~~--~~t--------s~tCp~GqnlCyK~~~~~~~~g~~v~rGCaaTC   46 (65)
T d2h8ua1           2 KCLIKYSQA--NES--------SKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATC   46 (65)
T ss_dssp             EEEEEECSS--CEE--------EEECCTTCCEEEEEEESSCTTCCCCEEEEESSC
T ss_pred             cceeCCCcC--CCc--------ceeCCCCcceeEEEEecCCCCCceEeeeeeCcC
Confidence            577777766  222        599999999999987643 34567789998654

>d1tgxa_ g.7.1.1 (A:) gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId: 8654]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: gamma-Cardiotoxin
species: Snake (Naja nigricollis) [TaxId: 8654]

Probab=89.53  E-value=0.075  Score=35.11  Aligned_cols=32  Identities=22%  Similarity=0.584  Sum_probs=27.2

Q ss_pred             cccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERKGAEEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~   74 (173)
                      .+|||+.+++|.|..........|.|+|.-+.
T Consensus        11 ~~tCp~GqnlCykk~~~~~~g~~v~rGCaatC   42 (60)
T d1tgxa_          11 WKTCPKGKNLCYKMTMRAAPMVPVKRGCIDVC   42 (60)
T ss_dssp             EEECCTTCCEEEEEEETTBTTCCSEEEEESSC
T ss_pred             cccCCCCcceeeeEEeeccCCCEEecceeccC
Confidence            58999999999999988766678889998654

>d2fd6u3 g.7.1.3 (U:92-188) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Urokinase plasminogen activator surface receptor, UPAR
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.16  Score=36.35  Aligned_cols=49  Identities=22%  Similarity=0.543  Sum_probs=37.9

Q ss_pred             eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEE--------EecCcceeEeechhh
Q psy5004          20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKII--------ERKGAEEIITRDCLS   72 (173)
Q Consensus        20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVi--------er~g~~~~itRdClS   72 (173)
                      |-|-.|.|.+-.|---    ++.+-+|....+.|+.|+        |..+..++.+|+|++
T Consensus         2 LEC~SC~SsD~SCERG----r~qsLQCr~p~eqClevVTh~~q~~~e~~~~de~~~rGCg~   58 (97)
T d2fd6u3           2 LECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY   58 (97)
T ss_dssp             CEEEEEETTTTTTTTT----CCEEEECSSTTCEEEEEEEEC----------CCSEEEEEEE
T ss_pred             ceeecccccccchhhc----hhhccccCCchhhHhHHhhhhhhccccCCcccccccccCCC
Confidence            5688999998888776    456789999999999888        566778899999998

>d1hc9a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bungarotoxin
species: Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]

Probab=86.47  E-value=0.25  Score=33.74  Aligned_cols=32  Identities=16%  Similarity=0.554  Sum_probs=24.6

Q ss_pred             cccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERKG----AEEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g----~~~~itRdClS~~   74 (173)
                      .+|||+.+++|.|......    --..|+|+|.-+.
T Consensus        13 ~etCp~GqnlCykk~w~d~~~~~rG~~i~rGCaATC   48 (74)
T d1hc9a_          13 AVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATC   48 (74)
T ss_dssp             EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred             cccCCCCcCeEEEEEeeccccCCCCCEEEcceeCcC
Confidence            5999999999998876542    2456789998654

>d1ntna_ g.7.1.1 (A:) Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 8657]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Neurotoxin I
species: Snake (Naja naja oxiana) [TaxId: 8657]

Probab=86.04  E-value=0.23  Score=33.78  Aligned_cols=32  Identities=19%  Similarity=0.399  Sum_probs=23.1

Q ss_pred             cccCCCCCCceEEEEEec----CcceeEeechhhhh
Q psy5004          43 SISCPEEDDICVKIIERK----GAEEIITRDCLSTV   74 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~----g~~~~itRdClS~~   74 (173)
                      ++|||+.+++|.+-....    .--..|+|+|.-+.
T Consensus        11 setCp~GqnlCy~K~W~d~~~~~rG~~i~rGCaATC   46 (72)
T d1ntna_          11 SETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATC   46 (72)
T ss_dssp             EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred             cccCCCCCceEEEEEeeccccCcCCCeEEcceECcC
Confidence            599999999998665432    12356789998655

>d2fd6u2 g.7.1.3 (U:189-275) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Urokinase plasminogen activator surface receptor, UPAR
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.42  E-value=0.42  Score=33.59  Aligned_cols=51  Identities=20%  Similarity=0.498  Sum_probs=37.6

Q ss_pred             ceeeeccc-CCCCCCCCCCCCCccccccCCCCCCceEEE--EEecCcceeEeechhhh
Q psy5004          19 ALLCYQCV-STQPGCGTPFKWLWYPSISCPEEDDICVKI--IERKGAEEIITRDCLST   73 (173)
Q Consensus        19 AL~CY~C~-S~~PgC~dpfn~~~~~~etCp~~~d~CvKV--ier~g~~~~itRdClS~   73 (173)
                      .|.||.|. +.+-+|....    +-+..|..+.+.|+..  ++..+..+..+|+|.+.
T Consensus         3 ~leC~SC~gss~~~Cs~~~----~~~l~Cr~p~~QClea~g~~~~~~~s~~vRGCat~   56 (87)
T d2fd6u2           3 GRQCYSCKGNSTHGCSSEE----TFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATA   56 (87)
T ss_dssp             EEEEEEEEEBTTTBSSTTT----CEEEEEETTCCEEEEEEEEETTTTEEEEEEEEECG
T ss_pred             CceeeecCCCCCccccccc----ceeeecCCchhhheeccCcccCCCccceecccccC
Confidence            58999995 4455788663    4478999999999543  45556677788999883

>d1v6pa_ g.7.1.1 (A:) Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) [TaxId: 8656]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Cobrotoxin II (ct2)
species: Taiwan cobra (Naja naja atra) [TaxId: 8656]

Probab=83.29  E-value=1.1  Score=29.58  Aligned_cols=29  Identities=21%  Similarity=0.287  Sum_probs=26.0

Q ss_pred             cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004          43 SISCPEEDDICVKIIERKGAEEIITRDCL   71 (173)
Q Consensus        43 ~etCp~~~d~CvKVier~g~~~~itRdCl   71 (173)
                      +++||..++.|-|-.-+..--..|+|+|.
T Consensus        14 t~~C~~Gen~CYkk~w~d~rg~~ierGCg   42 (62)
T d1v6pa_          14 TTGCSGGETNCYKKRWRDHRGYRTERGCG   42 (62)
T ss_dssp             EEECCTTCCCEEEEEEEETTEEEEEEEES
T ss_pred             cccCCCCcCeeEeeEeecCCCCEeeeeec
Confidence            58999999999988888888889999996