Psyllid ID: psy510


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPSK
cHHHHHHHHHHHcccEEEEEEEccccccccccccccEEEEEEEEEEccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEcccHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccc
cHHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEEEEEEcHHHHHHHHHHHHHcccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccHccHHHHHHHHHHHHHcccccccHHHcEcccccccccccccHHHHHHHHHHHHHHccccEEEcccccEEEEEcHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHccHHHEEHHHHHHHHHHHHEHHHcccccccccEEEcccccccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEccccccc
MPAFERMLWRACRGNvflrqaeietpledinsgdpvyKSVFIIFFQGDQLKTRVMKICEGfratlypcpeaptdrremsmgVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKcliaecwvpvlDIDAIQLALRrgtdrsgssvppilnrmdtfedpptynrtnkFTKAFQALIDAYgvssyremnptpytiitfPFLFAVMFGDLGHGAIMFLFAAWMVmkekplmtlktdnEIWKIFFGGRYIILLMGLFSMYTgliynddrsgssvppilnrmdtfedpptynrtnkFTKAFQALIDAygdrsgssvppilnrmdtfedpptynrtnkFTKAFQALIDAYgvssyremnpsk
MPAFERMLWRACRGNVFLRQAEIetpledinsgdpVYKSVFIIFFQGDQLKTRVMKICEGFRatlypcpeaptdrremsmgVTTRIEDLNtvigetqdhRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALrrgtdrsgssvppilnrmdtfedpptynrtNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAygvssyremnpsk
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPSK
****ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPE*********MGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRR***********************TYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYND**********************YNRTNKFTKAFQALIDAYG**********************YNRTNKFTKAFQALIDAYGV**********
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRR***************VIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNP**
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSS********
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREM****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFAAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query380 2.2.26 [Sep-21-2011]
A1A5G6 837 V-type proton ATPase 116 yes N/A 0.755 0.342 0.724 1e-127
Q8AVM5 831 V-type proton ATPase 116 N/A N/A 0.755 0.345 0.721 1e-127
Q29466 838 V-type proton ATPase 116 yes N/A 0.768 0.348 0.715 1e-127
P25286 838 V-type proton ATPase 116 yes N/A 0.768 0.348 0.708 1e-126
Q9Z1G4 839 V-type proton ATPase 116 yes N/A 0.768 0.348 0.708 1e-126
Q93050 837 V-type proton ATPase 116 yes N/A 0.768 0.348 0.712 1e-126
Q5R422 837 V-type proton ATPase 116 yes N/A 0.768 0.348 0.708 1e-126
P30628 905 Probable V-type proton AT yes N/A 0.768 0.322 0.691 1e-125
Q9I8D0 838 V-type proton ATPase 116 yes N/A 0.768 0.348 0.708 1e-125
Q920R6 833 V-type proton ATPase 116 no N/A 0.768 0.350 0.592 1e-107
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1 Back     alignment and function desciption
 Score =  456 bits (1173), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 208/287 (72%), Positives = 242/287 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
           FRA+LYPCPE P +R+EM+ GV TRIEDL  V+ +T+DHR RVL AAAK+++ WFIKVRK
Sbjct: 240 FRASLYPCPETPQERKEMATGVNTRIEDLQMVLNQTEDHRQRVLQAAAKSLRVWFIKVRK 299

Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
           +KAIYHTLN  N+DVTQKCLIAE W PV D+D+IQ ALRRGT+ SGS+VP ILNRM T +
Sbjct: 300 MKAIYHTLNLCNIDVTQKCLIAEVWCPVADLDSIQFALRRGTEHSGSTVPSILNRMQTNQ 359

Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
            PPTYN+TNKFT  FQ L+DAYG+ SYRE+NP PYTIITFPFLFAVMFGD GHG +M LF
Sbjct: 360 TPPTYNKTNKFTYGFQNLVDAYGIGSYREINPAPYTIITFPFLFAVMFGDFGHGILMTLF 419

Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYND 287
           A WMV++E  +++ K DNE++ + F GRYIILLMGLFS+YTGLIYND
Sbjct: 420 AVWMVVRESRILSQKIDNELFTMMFSGRYIILLMGLFSIYTGLIYND 466




Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.
Xenopus tropicalis (taxid: 8364)
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1 Back     alignment and function description
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1 Back     alignment and function description
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3 Back     alignment and function description
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3 Back     alignment and function description
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1 Back     alignment and function description
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3 Back     alignment and function description
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1 Back     alignment and function description
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
307174029 914 Vacuolar proton translocating ATPase 116 0.768 0.319 0.883 1e-156
332024224 920 Putative V-type proton ATPase 116 kDa su 0.768 0.317 0.876 1e-154
322797673 677 hypothetical protein SINV_13591 [Solenop 0.768 0.431 0.880 1e-154
307213911 894 Vacuolar proton translocating ATPase 116 0.768 0.326 0.873 1e-154
350401726 839 PREDICTED: V-type proton ATPase 116 kDa 0.768 0.348 0.876 1e-154
156548598 839 PREDICTED: V-type proton ATPase 116 kDa 0.768 0.348 0.873 1e-154
350401723 844 PREDICTED: V-type proton ATPase 116 kDa 0.768 0.345 0.876 1e-154
340718488 844 PREDICTED: v-type proton ATPase 116 kDa 0.768 0.345 0.876 1e-154
156548602 844 PREDICTED: V-type proton ATPase 116 kDa 0.768 0.345 0.873 1e-154
195110847 892 GI22777 [Drosophila mojavensis] gi|19391 0.868 0.369 0.779 1e-152
>gi|307174029|gb|EFN64732.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/292 (88%), Positives = 272/292 (93%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 260 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 319

Query: 61  FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
           FRATLYPCPEAP DRREM+MGV TRIEDLNTV+G+TQDHRHRVLVAAAKNIKNWF+KVRK
Sbjct: 320 FRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNIKNWFVKVRK 379

Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
           IKAIYHTLN FNLDVTQKCLIAECWVPVLDI+ IQLALRRGT+RSGSSVPPILNRM+TFE
Sbjct: 380 IKAIYHTLNLFNLDVTQKCLIAECWVPVLDIETIQLALRRGTERSGSSVPPILNRMETFE 439

Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
           DPPTYNRTNKFTK FQALIDAYGV+SYREMNPTPYTIITFPFLFA+MFGD GHG IMFLF
Sbjct: 440 DPPTYNRTNKFTKGFQALIDAYGVASYREMNPTPYTIITFPFLFAIMFGDTGHGLIMFLF 499

Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGS 292
             WMV+KEKPL   K+DNEIW IFFGGRYII LMGLFSMYTGLIYND  S S
Sbjct: 500 GGWMVLKEKPLAAKKSDNEIWNIFFGGRYIIFLMGLFSMYTGLIYNDIFSKS 551




Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024224|gb|EGI64428.1| Putative V-type proton ATPase 116 kDa subunit a [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322797673|gb|EFZ19682.1| hypothetical protein SINV_13591 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307213911|gb|EFN89158.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350401726|ref|XP_003486241.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|156548598|ref|XP_001607798.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350401723|ref|XP_003486240.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340718488|ref|XP_003397698.1| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|156548602|ref|XP_001607818.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 4 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195110847|ref|XP_001999991.1| GI22777 [Drosophila mojavensis] gi|193916585|gb|EDW15452.1| GI22777 [Drosophila mojavensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
FB|FBgn0028671 855 Vha100-1 "Vacuolar H[+] ATPase 0.865 0.384 0.782 1.9e-138
UNIPROTKB|Q29466 838 ATP6V0A1 "V-type proton ATPase 0.755 0.342 0.721 5e-115
MGI|MGI:103286 839 Atp6v0a1 "ATPase, H+ transport 0.921 0.417 0.613 5e-115
RGD|68405 838 Atp6v0a1 "ATPase, H+ transport 0.921 0.417 0.613 8.2e-115
UNIPROTKB|B7Z2A9 794 ATP6V0A1 "V-type proton ATPase 0.921 0.440 0.618 8.2e-115
UNIPROTKB|B7Z641 788 ATP6V0A1 "cDNA FLJ54439, highl 0.921 0.444 0.618 8.2e-115
UNIPROTKB|F5H569 837 ATP6V0A1 "V-type proton ATPase 0.921 0.418 0.618 8.2e-115
UNIPROTKB|Q93050 837 ATP6V0A1 "V-type proton ATPase 0.921 0.418 0.618 8.2e-115
UNIPROTKB|F1MH43 832 LOC785923 "Uncharacterized pro 0.755 0.344 0.717 1e-114
UNIPROTKB|F1MJV0 838 LOC785923 "Uncharacterized pro 0.755 0.342 0.717 1e-114
FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
 Identities = 263/336 (78%), Positives = 283/336 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +PAFERMLWRACRGNVFLRQA IETPLED  +GD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct:   205 LPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVKKICEG 264

Query:    61 FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
             FRATLYPCPEAP DRREM+MGV TRIEDLNTV+G+TQDHRHRVLVAAAKN+KNWF+KVRK
Sbjct:   265 FRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVRK 324

Query:   121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
             IKAIYHTLN FNLDVTQKCLIAECWVP+LDI+ IQLALRRGT+RSGSSVPPILNRM TFE
Sbjct:   325 IKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFE 384

Query:   181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
             +PPTYNRTNKFTKAFQALIDAYGV+SYREMNP PYTIITFPFLFAVMFGDLGHGAIM LF
Sbjct:   385 NPPTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALF 444

Query:   241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNR 300
               WM+ KEK L   KTDNEIW IFFGGRYII LMG+FSMYTGLIYND  S S     LN 
Sbjct:   445 GLWMIRKEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKS-----LNI 499

Query:   301 MDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVP 336
               +     +YN++      F  L    GD  G+  P
Sbjct:   500 FGSHWHL-SYNKSTVMENKFLQL-SPKGDYEGAPYP 533


GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS
GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISS
GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA
GO:0045202 "synapse" evidence=IDA
GO:0005516 "calmodulin binding" evidence=IDA
GO:0005769 "early endosome" evidence=IDA
GO:0051452 "intracellular pH reduction" evidence=IMP
GO:0008021 "synaptic vesicle" evidence=IDA
GO:0048388 "endosomal lumen acidification" evidence=IMP
GO:0009416 "response to light stimulus" evidence=IMP
GO:0009881 "photoreceptor activity" evidence=IMP
UNIPROTKB|Q29466 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:103286 Atp6v0a1 "ATPase, H+ transporting, lysosomal V0 subunit A1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|68405 Atp6v0a1 "ATPase, H+ transporting, lysosomal V0 subunit A1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z2A9 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z641 ATP6V0A1 "cDNA FLJ54439, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F5H569 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q93050 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MJV0 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93050VPP1_HUMANNo assigned EC number0.71230.76840.3488yesN/A
Q29466VPP1_BOVINNo assigned EC number0.71570.76840.3484yesN/A
P25286VPP1_RATNo assigned EC number0.70890.76840.3484yesN/A
Q9I8D0VPP1_CHICKNo assigned EC number0.70890.76840.3484yesN/A
A1A5G6VPP1_XENTRNo assigned EC number0.72470.75520.3428yesN/A
P30628VPP1_CAEELNo assigned EC number0.69170.76840.3226yesN/A
Q9Z1G4VPP1_MOUSENo assigned EC number0.70890.76840.3480yesN/A
Q5R422VPP1_PONABNo assigned EC number0.70890.76840.3488yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
pfam01496 707 pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni 1e-115
COG1269 660 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su 3e-39
PRK05771 646 PRK05771, PRK05771, V-type ATP synthase subunit I; 1e-22
pfam01496 707 pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni 5e-16
pfam01496 707 pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni 5e-09
COG1269 660 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su 2e-05
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family Back     alignment and domain information
 Score =  351 bits (903), Expect = e-115
 Identities = 144/287 (50%), Positives = 184/287 (64%), Gaps = 20/287 (6%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           + AFER LWRACRG  ++RQAEIE PLED        K+VFIIFF G +   +V KI + 
Sbjct: 154 LEAFERELWRACRG--YIRQAEIEEPLEDPK------KTVFIIFFVGKEDLDKVKKILDS 205

Query: 61  FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
           F   LY  PE   +R E+   V  RIE+L  V+ +T+ H  +VLV  A  +  W  +V K
Sbjct: 206 FGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHLEKVLVKIADELLAWDEQVSK 265

Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
            KA+Y TLN FN     K LIAE WVP  D++ ++ AL   T+ SGS VP I N ++T E
Sbjct: 266 EKAVYETLNLFN--YDTKTLIAEGWVPAKDLEKLKAALENATEGSGS-VPSIENDIETNE 322

Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
           +PPTY + NKFT  FQ ++DAYG+  YRE++PTP+TIITFPF F +MFGD G+G +MFL 
Sbjct: 323 EPPTYLKNNKFTAPFQMIVDAYGIPKYREIDPTPFTIITFPFFFGMMFGDAGYGLLMFLI 382

Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYND 287
           A  +V+ EK L   K         F GRYI+LLMG+FS+YTG IYND
Sbjct: 383 ALLLVLLEKKLGKKK---------FKGRYILLLMGVFSIYTGFIYND 420


This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707

>gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated Back     alignment and domain information
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family Back     alignment and domain information
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family Back     alignment and domain information
>gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 380
KOG2189|consensus 829 100.0
PF01496 759 V_ATPase_I: V-type ATPase 116kDa subunit family ; 100.0
PRK05771 646 V-type ATP synthase subunit I; Validated 100.0
COG1269 660 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E 100.0
KOG2189|consensus 829 99.75
PF01496 759 V_ATPase_I: V-type ATPase 116kDa subunit family ; 98.64
PRK05771 646 V-type ATP synthase subunit I; Validated 98.01
COG1269 660 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E 97.76
PF0537755 FlaC_arch: Flagella accessory protein C (FlaC); In 80.18
>KOG2189|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-79  Score=629.43  Aligned_cols=309  Identities=66%  Similarity=1.106  Sum_probs=297.2

Q ss_pred             hhhHHHHHHhcCCceEEEeeecCCcccCCCCCCccccEEEEEEEeChhhHHHHHHHHcccCceeecCCCCcchHHHHHHH
Q psy510            2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMG   81 (380)
Q Consensus         2 ~~f~r~l~R~trGn~~~~~~~i~~~~~d~~~ge~~~k~v~ii~~~~~~~~~~v~ki~~~~~~~~~~~p~~~~~~~~~l~~   81 (380)
                      ..|||+|||+||||+|++++|+++|+.||++|+.++|+||||+++|++++.||+|||++|+++.||+|++++++.+.+.+
T Consensus       186 ~~fER~LWRa~Rgn~f~r~~~ie~~l~dp~Tge~~~K~vFivF~~Geql~~kIkKIcd~f~a~~yp~p~~~~er~~~~~~  265 (829)
T KOG2189|consen  186 FAFERMLWRACRGNLFIRQSDIEEPLEDPKTGEPVEKNVFIVFFQGEQLKQKIKKICDGFGATLYPCPESPEERKEMLLE  265 (829)
T ss_pred             HHHHHHHHHHhccceEEEeecccccccCCccCCcceeEEEEEEeecHHHHHHHHHHHhccCcEeecCCCChHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcEEEEEEeccccCHHHHHHHHHhc
Q psy510           82 VTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRG  161 (380)
Q Consensus        82 l~~~i~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~t~~~~~~~GWvP~~~~~~l~~~l~~~  161 (380)
                      ++.+|++++.++.++++++.+.+..+++.+..|...++|+|++|++||++++|.|++|+++|||||..+++.++++|++.
T Consensus       266 v~~ri~DL~~Vl~~t~~~r~~vL~~~~~~l~~W~~~v~K~KaIyhtLN~fn~Dvt~KCLIaE~W~P~~dl~~vq~aL~~~  345 (829)
T KOG2189|consen  266 VNTRISDLQTVLDQTEDHRSRVLQAAAKNLPSWLIKVRKEKAIYHTLNMFNFDVTQKCLIAEGWCPVADLPDLQRALERG  345 (829)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCccccCceEEEEeecchhhHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcccceecccCCCCCCCccccCcccchHHHHHHHHhcCCCCCccCCCchhhhHHHHHHHHHhhhhhHHHHHHHHH
Q psy510          162 TDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFA  241 (380)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~~pPT~l~n~~~~~pFE~iv~~Yg~P~Y~EiDPT~~~aitFp~fFG~MfGD~GyGlll~l~~  241 (380)
                      ++.+|+.++.+.+..++++.|||+.|+|||+++||+|||.||+++|+|+||+|+++|||||+|++||||+|||++|+|++
T Consensus       346 ~~~sgS~v~~i~nv~~T~e~PPTy~RTNKFT~~FQ~IvDaYGVa~YrEvNPa~yTiITFPFLFAVMFGD~GHG~imlL~a  425 (829)
T KOG2189|consen  346 SEESGSQVPSILNVMETNEMPPTYFRTNKFTAGFQNIVDAYGVASYREVNPAPYTIITFPFLFAVMFGDLGHGLIMLLAA  425 (829)
T ss_pred             hhhcCCcchhhHhheecCCCCCcchhcchhhHHHHHHHHhcccccccccCCCceeEeehHHHHHHHhcccchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccccccccchhHHHhhhhhHHHHHHHhHHHHHHHHHhcCCCCCCCCccccccCCCCCCCCcccccccc
Q psy510          242 AWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKF  316 (380)
Q Consensus       242 ~~l~~~~~k~~~~~~~~~~~~~~f~~r~il~~~Gi~si~~G~lyg~fFG~~l~~~~l~~~~~~~~~~~~~~t~~~  316 (380)
                      +|+++++||+..++..+++|+|+|+||||+++||++|||+|+||||+|+.+++.     +++ .|...++.++..
T Consensus       426 l~~Vl~Ekkl~~~k~~~EI~~mfF~GRYIIlLMGlFSiYTGliYND~FSks~ni-----FgS-~W~~~~~~~~~~  494 (829)
T KOG2189|consen  426 LWMVLNEKKLASQKIGDEIFNMFFGGRYIILLMGLFSIYTGLIYNDFFSKSMNI-----FGS-SWSNPYNVTAVL  494 (829)
T ss_pred             HHHHHhcchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHhhhhhhhccccccc-----ccC-cccCccccchhc
Confidence            999999999987777789999999999999999999999999999999999873     344 677777776443



>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PRK05771 V-type ATP synthase subunit I; Validated Back     alignment and domain information
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information
>KOG2189|consensus Back     alignment and domain information
>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PRK05771 V-type ATP synthase subunit I; Validated Back     alignment and domain information
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information
>PF05377 FlaC_arch: Flagella accessory protein C (FlaC); InterPro: IPR008039 Although archaeal flagella appear superficially similar to those of bacteria, they are quite distinct [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
3rrk_A357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 6e-41
3rrk_A357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 2e-11
3rrk_A357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 1e-06
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 Back     alignment and structure
 Score =  146 bits (370), Expect = 6e-41
 Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 14/210 (6%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           + A  + L  A      L    +E  L           +  ++  + +    R      G
Sbjct: 161 LEAVRKALQEALADRFVLEAEPLENQL-----------AALVVVKRSELEAARSSLSRLG 209

Query: 61  FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
                +P         + +  +  R       +   ++   R+   + + +   + + + 
Sbjct: 210 LAELRFPGAYGAMPLGKAAARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKD 269

Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
             A Y  +   ++   +       WVP      ++ AL R  D+   +  P+    ++  
Sbjct: 270 EVARYKAVA--DMAAGKYGAALMGWVPQKAKGKVEEALGRLRDQIVYTFEPVDEHHES-H 326

Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREM 210
             P       + K F+ L       +Y   
Sbjct: 327 QVPVTLENPAWAKPFELLHGFLNTPAYGSH 356


>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 Back     alignment and structure
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
3rrk_A357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 99.97
3rrk_A357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 98.61
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Back     alignment and structure
Probab=99.97  E-value=4e-31  Score=261.15  Aligned_cols=191  Identities=12%  Similarity=0.107  Sum_probs=129.0

Q ss_pred             hhhHHHHHHhcCCceEEEeeecCCcccCCCCCCccccEEEEEEEeChhhHHHHHHHHcccCceeecCCCCcc--hHHHHH
Q psy510            2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPT--DRREMS   79 (380)
Q Consensus         2 ~~f~r~l~R~trGn~~~~~~~i~~~~~d~~~ge~~~k~v~ii~~~~~~~~~~v~ki~~~~~~~~~~~p~~~~--~~~~~l   79 (380)
                      ..|+|.|||+++|..+...            ++...+.+++++++ ++..+++++||+++|++.+++|+..+  .+.+.+
T Consensus       162 ~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~vv~~~-~~~~~~v~~il~s~~f~~~~~p~~~~~~~p~~~l  228 (357)
T 3rrk_A          162 EAVRKALQEALADRFVLEA------------EPLENQLAALVVVK-RSELEAARSSLSRLGLAELRFPGAYGAMPLGKAA  228 (357)
T ss_dssp             HHHHHHHHHHHTTSCEEEE------------EECSSSEEEEEEEE-GGGHHHHHHHHHTTTCCBCCCCGGGGGSCHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEe------------ecCCCcEEEEEEEE-HHHHHHHHHHHHHCCCeeccCCcccCCCCHHHHH
Confidence            4789999999999443221            22335666766665 56778999999999999999998777  999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcEEEEEEeccccCHHHHHHHHH
Q psy510           80 MGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALR  159 (380)
Q Consensus        80 ~~l~~~i~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~t~~~~~~~GWvP~~~~~~l~~~l~  159 (380)
                      +++++++++++++++++++++.++...+...|..|...+.+++++|++++++  +.|+++++++||||++++++++++|+
T Consensus       229 ~~l~~~i~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~gWvp~~~~~~~~~~l~  306 (357)
T 3rrk_A          229 ARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKDEVARYKAVADM--AAGKYGAALMGWVPQKAKGKVEEALG  306 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCSEEEEEEECTTTHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccCcEEEEEEEeeHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999965  47899999999999999999999998


Q ss_pred             hccccCCCcccceecccCCC---CCCCccccCcccchHHHHHHHHhcCCCCCccC
Q psy510          160 RGTDRSGSSVPPILNRMDTF---EDPPTYNRTNKFTKAFQALIDAYGVSSYREMN  211 (380)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~---~~pPT~l~n~~~~~pFE~iv~~Yg~P~Y~EiD  211 (380)
                      + ++   ..+...+.+++++   +.|||+++||+|++|||.||+|||+|+|+|||
T Consensus       307 ~-~~---~~~~~~~~~~~~~~~~~~pPt~l~n~~~~~~fe~iv~~Yg~p~Y~EiD  357 (357)
T 3rrk_A          307 R-LR---DQIVYTFEPVDEHHESHQVPVTLENPAWAKPFELLHGFLNTPAYGSHD  357 (357)
T ss_dssp             S-SC---EEEEC-------------------------------------------
T ss_pred             h-cC---CceEEEEecCCccccCCCcCEeccCCchhhHHHHHHHhcCCCCCCCCC
Confidence            7 32   2455666776666   68999999999999999999999999999998



>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00