Psyllid ID: psy510
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 380 | ||||||
| 307174029 | 914 | Vacuolar proton translocating ATPase 116 | 0.768 | 0.319 | 0.883 | 1e-156 | |
| 332024224 | 920 | Putative V-type proton ATPase 116 kDa su | 0.768 | 0.317 | 0.876 | 1e-154 | |
| 322797673 | 677 | hypothetical protein SINV_13591 [Solenop | 0.768 | 0.431 | 0.880 | 1e-154 | |
| 307213911 | 894 | Vacuolar proton translocating ATPase 116 | 0.768 | 0.326 | 0.873 | 1e-154 | |
| 350401726 | 839 | PREDICTED: V-type proton ATPase 116 kDa | 0.768 | 0.348 | 0.876 | 1e-154 | |
| 156548598 | 839 | PREDICTED: V-type proton ATPase 116 kDa | 0.768 | 0.348 | 0.873 | 1e-154 | |
| 350401723 | 844 | PREDICTED: V-type proton ATPase 116 kDa | 0.768 | 0.345 | 0.876 | 1e-154 | |
| 340718488 | 844 | PREDICTED: v-type proton ATPase 116 kDa | 0.768 | 0.345 | 0.876 | 1e-154 | |
| 156548602 | 844 | PREDICTED: V-type proton ATPase 116 kDa | 0.768 | 0.345 | 0.873 | 1e-154 | |
| 195110847 | 892 | GI22777 [Drosophila mojavensis] gi|19391 | 0.868 | 0.369 | 0.779 | 1e-152 |
| >gi|307174029|gb|EFN64732.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/292 (88%), Positives = 272/292 (93%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 260 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 319
Query: 61 FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
FRATLYPCPEAP DRREM+MGV TRIEDLNTV+G+TQDHRHRVLVAAAKNIKNWF+KVRK
Sbjct: 320 FRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNIKNWFVKVRK 379
Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
IKAIYHTLN FNLDVTQKCLIAECWVPVLDI+ IQLALRRGT+RSGSSVPPILNRM+TFE
Sbjct: 380 IKAIYHTLNLFNLDVTQKCLIAECWVPVLDIETIQLALRRGTERSGSSVPPILNRMETFE 439
Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
DPPTYNRTNKFTK FQALIDAYGV+SYREMNPTPYTIITFPFLFA+MFGD GHG IMFLF
Sbjct: 440 DPPTYNRTNKFTKGFQALIDAYGVASYREMNPTPYTIITFPFLFAIMFGDTGHGLIMFLF 499
Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGS 292
WMV+KEKPL K+DNEIW IFFGGRYII LMGLFSMYTGLIYND S S
Sbjct: 500 GGWMVLKEKPLAAKKSDNEIWNIFFGGRYIIFLMGLFSMYTGLIYNDIFSKS 551
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332024224|gb|EGI64428.1| Putative V-type proton ATPase 116 kDa subunit a [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|322797673|gb|EFZ19682.1| hypothetical protein SINV_13591 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|307213911|gb|EFN89158.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|350401726|ref|XP_003486241.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|156548598|ref|XP_001607798.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|350401723|ref|XP_003486240.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340718488|ref|XP_003397698.1| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|156548602|ref|XP_001607818.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 4 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|195110847|ref|XP_001999991.1| GI22777 [Drosophila mojavensis] gi|193916585|gb|EDW15452.1| GI22777 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 380 | ||||||
| FB|FBgn0028671 | 855 | Vha100-1 "Vacuolar H[+] ATPase | 0.865 | 0.384 | 0.782 | 1.9e-138 | |
| UNIPROTKB|Q29466 | 838 | ATP6V0A1 "V-type proton ATPase | 0.755 | 0.342 | 0.721 | 5e-115 | |
| MGI|MGI:103286 | 839 | Atp6v0a1 "ATPase, H+ transport | 0.921 | 0.417 | 0.613 | 5e-115 | |
| RGD|68405 | 838 | Atp6v0a1 "ATPase, H+ transport | 0.921 | 0.417 | 0.613 | 8.2e-115 | |
| UNIPROTKB|B7Z2A9 | 794 | ATP6V0A1 "V-type proton ATPase | 0.921 | 0.440 | 0.618 | 8.2e-115 | |
| UNIPROTKB|B7Z641 | 788 | ATP6V0A1 "cDNA FLJ54439, highl | 0.921 | 0.444 | 0.618 | 8.2e-115 | |
| UNIPROTKB|F5H569 | 837 | ATP6V0A1 "V-type proton ATPase | 0.921 | 0.418 | 0.618 | 8.2e-115 | |
| UNIPROTKB|Q93050 | 837 | ATP6V0A1 "V-type proton ATPase | 0.921 | 0.418 | 0.618 | 8.2e-115 | |
| UNIPROTKB|F1MH43 | 832 | LOC785923 "Uncharacterized pro | 0.755 | 0.344 | 0.717 | 1e-114 | |
| UNIPROTKB|F1MJV0 | 838 | LOC785923 "Uncharacterized pro | 0.755 | 0.342 | 0.717 | 1e-114 |
| FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 263/336 (78%), Positives = 283/336 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+PAFERMLWRACRGNVFLRQA IETPLED +GD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct: 205 LPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVKKICEG 264
Query: 61 FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
FRATLYPCPEAP DRREM+MGV TRIEDLNTV+G+TQDHRHRVLVAAAKN+KNWF+KVRK
Sbjct: 265 FRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVRK 324
Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
IKAIYHTLN FNLDVTQKCLIAECWVP+LDI+ IQLALRRGT+RSGSSVPPILNRM TFE
Sbjct: 325 IKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFE 384
Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
+PPTYNRTNKFTKAFQALIDAYGV+SYREMNP PYTIITFPFLFAVMFGDLGHGAIM LF
Sbjct: 385 NPPTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALF 444
Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNR 300
WM+ KEK L KTDNEIW IFFGGRYII LMG+FSMYTGLIYND S S LN
Sbjct: 445 GLWMIRKEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKS-----LNI 499
Query: 301 MDTFEDPPTYNRTNKFTKAFQALIDAYGDRSGSSVP 336
+ +YN++ F L GD G+ P
Sbjct: 500 FGSHWHL-SYNKSTVMENKFLQL-SPKGDYEGAPYP 533
|
|
| UNIPROTKB|Q29466 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:103286 Atp6v0a1 "ATPase, H+ transporting, lysosomal V0 subunit A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|68405 Atp6v0a1 "ATPase, H+ transporting, lysosomal V0 subunit A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7Z2A9 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7Z641 ATP6V0A1 "cDNA FLJ54439, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F5H569 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q93050 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MJV0 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 380 | |||
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 1e-115 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 3e-39 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 1e-22 | |
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 5e-16 | |
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 5e-09 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 2e-05 |
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-115
Identities = 144/287 (50%), Positives = 184/287 (64%), Gaps = 20/287 (6%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+ AFER LWRACRG ++RQAEIE PLED K+VFIIFF G + +V KI +
Sbjct: 154 LEAFERELWRACRG--YIRQAEIEEPLEDPK------KTVFIIFFVGKEDLDKVKKILDS 205
Query: 61 FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
F LY PE +R E+ V RIE+L V+ +T+ H +VLV A + W +V K
Sbjct: 206 FGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHLEKVLVKIADELLAWDEQVSK 265
Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
KA+Y TLN FN K LIAE WVP D++ ++ AL T+ SGS VP I N ++T E
Sbjct: 266 EKAVYETLNLFN--YDTKTLIAEGWVPAKDLEKLKAALENATEGSGS-VPSIENDIETNE 322
Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLF 240
+PPTY + NKFT FQ ++DAYG+ YRE++PTP+TIITFPF F +MFGD G+G +MFL
Sbjct: 323 EPPTYLKNNKFTAPFQMIVDAYGIPKYREIDPTPFTIITFPFFFGMMFGDAGYGLLMFLI 382
Query: 241 AAWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYND 287
A +V+ EK L K F GRYI+LLMG+FS+YTG IYND
Sbjct: 383 ALLLVLLEKKLGKKK---------FKGRYILLLMGVFSIYTGFIYND 420
|
This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707 |
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 380 | |||
| KOG2189|consensus | 829 | 100.0 | ||
| PF01496 | 759 | V_ATPase_I: V-type ATPase 116kDa subunit family ; | 100.0 | |
| PRK05771 | 646 | V-type ATP synthase subunit I; Validated | 100.0 | |
| COG1269 | 660 | NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E | 100.0 | |
| KOG2189|consensus | 829 | 99.75 | ||
| PF01496 | 759 | V_ATPase_I: V-type ATPase 116kDa subunit family ; | 98.64 | |
| PRK05771 | 646 | V-type ATP synthase subunit I; Validated | 98.01 | |
| COG1269 | 660 | NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E | 97.76 | |
| PF05377 | 55 | FlaC_arch: Flagella accessory protein C (FlaC); In | 80.18 |
| >KOG2189|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=629.43 Aligned_cols=309 Identities=66% Similarity=1.106 Sum_probs=297.2
Q ss_pred hhhHHHHHHhcCCceEEEeeecCCcccCCCCCCccccEEEEEEEeChhhHHHHHHHHcccCceeecCCCCcchHHHHHHH
Q psy510 2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMG 81 (380)
Q Consensus 2 ~~f~r~l~R~trGn~~~~~~~i~~~~~d~~~ge~~~k~v~ii~~~~~~~~~~v~ki~~~~~~~~~~~p~~~~~~~~~l~~ 81 (380)
..|||+|||+||||+|++++|+++|+.||++|+.++|+||||+++|++++.||+|||++|+++.||+|++++++.+.+.+
T Consensus 186 ~~fER~LWRa~Rgn~f~r~~~ie~~l~dp~Tge~~~K~vFivF~~Geql~~kIkKIcd~f~a~~yp~p~~~~er~~~~~~ 265 (829)
T KOG2189|consen 186 FAFERMLWRACRGNLFIRQSDIEEPLEDPKTGEPVEKNVFIVFFQGEQLKQKIKKICDGFGATLYPCPESPEERKEMLLE 265 (829)
T ss_pred HHHHHHHHHHhccceEEEeecccccccCCccCCcceeEEEEEEeecHHHHHHHHHHHhccCcEeecCCCChHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcEEEEEEeccccCHHHHHHHHHhc
Q psy510 82 VTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRG 161 (380)
Q Consensus 82 l~~~i~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~t~~~~~~~GWvP~~~~~~l~~~l~~~ 161 (380)
++.+|++++.++.++++++.+.+..+++.+..|...++|+|++|++||++++|.|++|+++|||||..+++.++++|++.
T Consensus 266 v~~ri~DL~~Vl~~t~~~r~~vL~~~~~~l~~W~~~v~K~KaIyhtLN~fn~Dvt~KCLIaE~W~P~~dl~~vq~aL~~~ 345 (829)
T KOG2189|consen 266 VNTRISDLQTVLDQTEDHRSRVLQAAAKNLPSWLIKVRKEKAIYHTLNMFNFDVTQKCLIAEGWCPVADLPDLQRALERG 345 (829)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCccccCceEEEEeecchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccceecccCCCCCCCccccCcccchHHHHHHHHhcCCCCCccCCCchhhhHHHHHHHHHhhhhhHHHHHHHHH
Q psy510 162 TDRSGSSVPPILNRMDTFEDPPTYNRTNKFTKAFQALIDAYGVSSYREMNPTPYTIITFPFLFAVMFGDLGHGAIMFLFA 241 (380)
Q Consensus 162 ~~~~~~~v~~~~~~~~~~~~pPT~l~n~~~~~pFE~iv~~Yg~P~Y~EiDPT~~~aitFp~fFG~MfGD~GyGlll~l~~ 241 (380)
++.+|+.++.+.+..++++.|||+.|+|||+++||+|||.||+++|+|+||+|+++|||||+|++||||+|||++|+|++
T Consensus 346 ~~~sgS~v~~i~nv~~T~e~PPTy~RTNKFT~~FQ~IvDaYGVa~YrEvNPa~yTiITFPFLFAVMFGD~GHG~imlL~a 425 (829)
T KOG2189|consen 346 SEESGSQVPSILNVMETNEMPPTYFRTNKFTAGFQNIVDAYGVASYREVNPAPYTIITFPFLFAVMFGDLGHGLIMLLAA 425 (829)
T ss_pred hhhcCCcchhhHhheecCCCCCcchhcchhhHHHHHHHHhcccccccccCCCceeEeehHHHHHHHhcccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccccchhHHHhhhhhHHHHHHHhHHHHHHHHHhcCCCCCCCCccccccCCCCCCCCcccccccc
Q psy510 242 AWMVMKEKPLMTLKTDNEIWKIFFGGRYIILLMGLFSMYTGLIYNDDRSGSSVPPILNRMDTFEDPPTYNRTNKF 316 (380)
Q Consensus 242 ~~l~~~~~k~~~~~~~~~~~~~~f~~r~il~~~Gi~si~~G~lyg~fFG~~l~~~~l~~~~~~~~~~~~~~t~~~ 316 (380)
+|+++++||+..++..+++|+|+|+||||+++||++|||+|+||||+|+.+++. +++ .|...++.++..
T Consensus 426 l~~Vl~Ekkl~~~k~~~EI~~mfF~GRYIIlLMGlFSiYTGliYND~FSks~ni-----FgS-~W~~~~~~~~~~ 494 (829)
T KOG2189|consen 426 LWMVLNEKKLASQKIGDEIFNMFFGGRYIILLMGLFSIYTGLIYNDFFSKSMNI-----FGS-SWSNPYNVTAVL 494 (829)
T ss_pred HHHHHhcchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHhhhhhhhccccccc-----ccC-cccCccccchhc
Confidence 999999999987777789999999999999999999999999999999999873 344 677777776443
|
|
| >PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >PRK05771 V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2189|consensus | Back alignment and domain information |
|---|
| >PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >PRK05771 V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF05377 FlaC_arch: Flagella accessory protein C (FlaC); InterPro: IPR008039 Although archaeal flagella appear superficially similar to those of bacteria, they are quite distinct [] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 380 | |||
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 6e-41 | |
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 2e-11 | |
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 1e-06 |
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 6e-41
Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 14/210 (6%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+ A + L A L +E L + ++ + + R G
Sbjct: 161 LEAVRKALQEALADRFVLEAEPLENQL-----------AALVVVKRSELEAARSSLSRLG 209
Query: 61 FRATLYPCPEAPTDRREMSMGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRK 120
+P + + + R + ++ R+ + + + + + +
Sbjct: 210 LAELRFPGAYGAMPLGKAAARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKD 269
Query: 121 IKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALRRGTDRSGSSVPPILNRMDTFE 180
A Y + ++ + WVP ++ AL R D+ + P+ ++
Sbjct: 270 EVARYKAVA--DMAAGKYGAALMGWVPQKAKGKVEEALGRLRDQIVYTFEPVDEHHES-H 326
Query: 181 DPPTYNRTNKFTKAFQALIDAYGVSSYREM 210
P + K F+ L +Y
Sbjct: 327 QVPVTLENPAWAKPFELLHGFLNTPAYGSH 356
|
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 | Back alignment and structure |
|---|
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 380 | |||
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 99.97 | |
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 98.61 |
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=261.15 Aligned_cols=191 Identities=12% Similarity=0.107 Sum_probs=129.0
Q ss_pred hhhHHHHHHhcCCceEEEeeecCCcccCCCCCCccccEEEEEEEeChhhHHHHHHHHcccCceeecCCCCcc--hHHHHH
Q psy510 2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPT--DRREMS 79 (380)
Q Consensus 2 ~~f~r~l~R~trGn~~~~~~~i~~~~~d~~~ge~~~k~v~ii~~~~~~~~~~v~ki~~~~~~~~~~~p~~~~--~~~~~l 79 (380)
..|+|.|||+++|..+... ++...+.+++++++ ++..+++++||+++|++.+++|+..+ .+.+.+
T Consensus 162 ~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~vv~~~-~~~~~~v~~il~s~~f~~~~~p~~~~~~~p~~~l 228 (357)
T 3rrk_A 162 EAVRKALQEALADRFVLEA------------EPLENQLAALVVVK-RSELEAARSSLSRLGLAELRFPGAYGAMPLGKAA 228 (357)
T ss_dssp HHHHHHHHHHHTTSCEEEE------------EECSSSEEEEEEEE-GGGHHHHHHHHHTTTCCBCCCCGGGGGSCHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEe------------ecCCCcEEEEEEEE-HHHHHHHHHHHHHCCCeeccCCcccCCCCHHHHH
Confidence 4789999999999443221 22335666766665 56778999999999999999998777 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcEEEEEEeccccCHHHHHHHHH
Q psy510 80 MGVTTRIEDLNTVIGETQDHRHRVLVAAAKNIKNWFIKVRKIKAIYHTLNFFNLDVTQKCLIAECWVPVLDIDAIQLALR 159 (380)
Q Consensus 80 ~~l~~~i~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~t~~~~~~~GWvP~~~~~~l~~~l~ 159 (380)
+++++++++++++++++++++.++...+...|..|...+.+++++|++++++ +.|+++++++||||++++++++++|+
T Consensus 229 ~~l~~~i~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~gWvp~~~~~~~~~~l~ 306 (357)
T 3rrk_A 229 ARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKDEVARYKAVADM--AAGKYGAALMGWVPQKAKGKVEEALG 306 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCSEEEEEEECTTTHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccCcEEEEEEEeeHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999965 47899999999999999999999998
Q ss_pred hccccCCCcccceecccCCC---CCCCccccCcccchHHHHHHHHhcCCCCCccC
Q psy510 160 RGTDRSGSSVPPILNRMDTF---EDPPTYNRTNKFTKAFQALIDAYGVSSYREMN 211 (380)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~---~~pPT~l~n~~~~~pFE~iv~~Yg~P~Y~EiD 211 (380)
+ ++ ..+...+.+++++ +.|||+++||+|++|||.||+|||+|+|+|||
T Consensus 307 ~-~~---~~~~~~~~~~~~~~~~~~pPt~l~n~~~~~~fe~iv~~Yg~p~Y~EiD 357 (357)
T 3rrk_A 307 R-LR---DQIVYTFEPVDEHHESHQVPVTLENPAWAKPFELLHGFLNTPAYGSHD 357 (357)
T ss_dssp S-SC---EEEEC-------------------------------------------
T ss_pred h-cC---CceEEEEecCCccccCCCcCEeccCCchhhHHHHHHHhcCCCCCCCCC
Confidence 7 32 2455666776666 68999999999999999999999999999998
|
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00