Psyllid ID: psy5127


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
MRAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
ccccHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHc
cccccHHHHHHccccccEccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccc
mramdgllakstldrdvikpqdvKDVLSVVasnpegnfLAWRHLKAHWKGLQnlfgngtfsMGALIGVvtshfsapydlHEVKAFFkdmdvgsgarsLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
mramdgllakstldrdvikpqdVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
MRAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
****************VIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSY**
MRAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVG***RSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
MRAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
****DGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSY**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query128 2.2.26 [Sep-21-2011]
P15144967 Aminopeptidase N OS=Homo yes N/A 0.882 0.116 0.396 1e-19
P79098965 Aminopeptidase N OS=Bos t yes N/A 0.875 0.116 0.408 2e-19
P15145963 Aminopeptidase N OS=Sus s yes N/A 0.875 0.116 0.417 3e-19
P79171967 Aminopeptidase N OS=Felis N/A N/A 0.882 0.116 0.379 1e-18
P15541966 Aminopeptidase N OS=Oryct yes N/A 0.890 0.118 0.393 2e-18
P97449966 Aminopeptidase N OS=Mus m yes N/A 0.882 0.116 0.370 9e-18
O57579967 Aminopeptidase N OS=Gallu yes N/A 0.875 0.115 0.373 1e-17
P15684965 Aminopeptidase N OS=Rattu yes N/A 0.882 0.117 0.362 2e-17
Q9NZ08941 Endoplasmic reticulum ami no N/A 0.859 0.116 0.378 2e-14
Q8C1291025 Leucyl-cystinyl aminopept no N/A 0.906 0.113 0.341 3e-14
>sp|P15144|AMPN_HUMAN Aminopeptidase N OS=Homo sapiens GN=ANPEP PE=1 SV=4 Back     alignment and function desciption
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 12  TLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTS 71
           TL+ D+I+ QD    +  + +N  G  L W  ++++WK L N +G G+FS   LI  VT 
Sbjct: 848 TLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTR 907

Query: 72  HFSAPYDLHEVKAFFKDMD---VGSGARSLEQSLETIELNIHWVRRNEELIFQWLS 124
            FS  Y+L +++ F KD +    GSG R+LEQ+LE  + NI WV+ N+E++ QW +
Sbjct: 908 RFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFT 963




Broad specificity aminopeptidase. Plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. May play a critical role in the pathogenesis of cholesterol gallstone disease. May be involved in the metabolism of regulatory peptides of diverse cell types including small intestinal and tubular epithelial cells, macrophages, granulocytes and synaptic membranes from the CNS. Found to cleave antigen peptides bound to major histocompatibility complex class II molecules of presenting cells and to degrade neurotransmitters at synaptic junctions. Is also implicated as a regulator of IL-8 bioavailability in the endometrium, and therefore may contribute to the regulation of angiogenesis. Is used as a marker for acute myeloid leukemia and plays a role in tumor invasion. In case of human coronavirus 229E (HCoV-229E) infection, serves as receptor for HCoV-229E spike glycoprotein. Mediates as well human cytomegalovirus (HCMV) infection.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2
>sp|P79098|AMPN_BOVIN Aminopeptidase N OS=Bos taurus GN=ANPEP PE=2 SV=4 Back     alignment and function description
>sp|P15145|AMPN_PIG Aminopeptidase N OS=Sus scrofa GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P79171|AMPN_FELCA Aminopeptidase N OS=Felis catus GN=ANPEP PE=1 SV=3 Back     alignment and function description
>sp|P15541|AMPN_RABIT Aminopeptidase N OS=Oryctolagus cuniculus GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P97449|AMPN_MOUSE Aminopeptidase N OS=Mus musculus GN=Anpep PE=1 SV=4 Back     alignment and function description
>sp|O57579|AMPN_CHICK Aminopeptidase N OS=Gallus gallus GN=ANPEP PE=1 SV=1 Back     alignment and function description
>sp|P15684|AMPN_RAT Aminopeptidase N OS=Rattus norvegicus GN=Anpep PE=1 SV=2 Back     alignment and function description
>sp|Q9NZ08|ERAP1_HUMAN Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3 Back     alignment and function description
>sp|Q8C129|LCAP_MOUSE Leucyl-cystinyl aminopeptidase OS=Mus musculus GN=Lnpep PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query128
189233823 1704 PREDICTED: similar to AGAP006347-PA [Tri 0.914 0.068 0.615 2e-38
270015121 1024 aminopeptidase N-like protein [Tribolium 0.914 0.114 0.615 3e-38
345496100 1008 PREDICTED: endoplasmic reticulum aminope 0.906 0.115 0.646 5e-38
242021367 1011 Aminopeptidase N precursor, putative [Pe 0.921 0.116 0.610 1e-37
350412311 1004 PREDICTED: endoplasmic reticulum aminope 0.906 0.115 0.586 3e-35
340709539 1004 PREDICTED: endoplasmic reticulum aminope 0.906 0.115 0.577 2e-34
383860399 1002 PREDICTED: endoplasmic reticulum aminope 0.906 0.115 0.568 7e-34
328703032 995 PREDICTED: endoplasmic reticulum aminope 0.906 0.116 0.598 9e-33
380023453 1001 PREDICTED: LOW QUALITY PROTEIN: endoplas 0.890 0.113 0.560 4e-31
328792853 1001 PREDICTED: endoplasmic reticulum aminope 0.859 0.109 0.562 1e-29
>gi|189233823|ref|XP_971780.2| PREDICTED: similar to AGAP006347-PA [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/117 (61%), Positives = 92/117 (78%)

Query: 12   TLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTS 71
            TLDR+++KPQDVK VL+VVA+NPEG  LAWRHLKA+W  + +LFGN TF MG LI  VT+
Sbjct: 1588 TLDRNMVKPQDVKIVLAVVAANPEGRLLAWRHLKAYWPTMHSLFGNATFMMGGLISAVTA 1647

Query: 72   HFSAPYDLHEVKAFFKDMDVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSYLQ 128
            H S PYD +EV  +F  M+VGS  R+LEQSLETI+LNI+WV +NE  I+ WL +Y++
Sbjct: 1648 HLSTPYDYYEVSTYFNGMNVGSATRALEQSLETIKLNINWVSQNEADIYTWLRNYVK 1704




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015121|gb|EFA11569.1| aminopeptidase N-like protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|345496100|ref|XP_001603771.2| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242021367|ref|XP_002431116.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] gi|212516365|gb|EEB18378.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|350412311|ref|XP_003489605.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340709539|ref|XP_003393363.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383860399|ref|XP_003705678.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328703032|ref|XP_003242073.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380023453|ref|XP_003695537.1| PREDICTED: LOW QUALITY PROTEIN: endoplasmic reticulum aminopeptidase 2-like [Apis florea] Back     alignment and taxonomy information
>gi|328792853|ref|XP_395725.3| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query128
UNIPROTKB|F1MN84965 ANPEP "Aminopeptidase N" [Bos 0.898 0.119 0.398 1.1e-18
UNIPROTKB|P79098965 ANPEP "Aminopeptidase N" [Bos 0.898 0.119 0.398 1.1e-18
UNIPROTKB|P15144967 ANPEP "Aminopeptidase N" [Homo 0.882 0.116 0.396 1.8e-18
UNIPROTKB|F1PCB5975 ANPEP "Aminopeptidase N" [Cani 0.867 0.113 0.429 1.8e-18
UNIPROTKB|F1SK03963 ANPEP "Aminopeptidase N" [Sus 0.867 0.115 0.421 2.3e-18
UNIPROTKB|P15145963 ANPEP "Aminopeptidase N" [Sus 0.867 0.115 0.421 2.3e-18
UNIPROTKB|O57579967 ANPEP "Aminopeptidase N" [Gall 0.867 0.114 0.377 4.4e-17
MGI|MGI:5000466966 Anpep "alanyl (membrane) amino 0.882 0.116 0.370 1.2e-16
RGD|2991965 Anpep "alanyl (membrane) amino 0.882 0.117 0.362 1.9e-16
UNIPROTKB|G3V7W7965 Anpep "Alanyl (Membrane) amino 0.882 0.117 0.362 1.9e-16
UNIPROTKB|F1MN84 ANPEP "Aminopeptidase N" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 237 (88.5 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 47/118 (39%), Positives = 75/118 (63%)

Query:    12 TLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTS 71
             TL+ D+I+ QD    ++ +ASN  G  LAW  ++++WK L   +G G+FS   LI  VT 
Sbjct:   847 TLNPDLIRKQDATSTITSIASNVIGQSLAWDFIRSNWKKLFEDYGGGSFSFSNLIQGVTR 906

Query:    72 HFSAPYDLHEVKAFFKD-MDVG--SGARSLEQSLETIELNIHWVRRNEELIFQWLSSY 126
              FS  ++L +++ F ++ MDVG  SG R+LEQ+LE  + NI+WV+ N+E++  W   +
Sbjct:   907 RFSTEFELQQLEEFKENNMDVGFGSGTRALEQALEKTKANINWVKENKEVVLNWFKDH 964




GO:0009897 "external side of plasma membrane" evidence=IEA
GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
UNIPROTKB|P79098 ANPEP "Aminopeptidase N" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P15144 ANPEP "Aminopeptidase N" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PCB5 ANPEP "Aminopeptidase N" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SK03 ANPEP "Aminopeptidase N" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P15145 ANPEP "Aminopeptidase N" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O57579 ANPEP "Aminopeptidase N" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:5000466 Anpep "alanyl (membrane) aminopeptidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2991 Anpep "alanyl (membrane) aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3V7W7 Anpep "Alanyl (Membrane) aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query128
pfam11838323 pfam11838, DUF3358, Domain of unknown function (DU 1e-09
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information
 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 10  KSTLDRDVIKPQDVKDVLS-VVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGV 68
              LD D +  QD++ V++ +  SN  G  L W  ++ ++  L      G+ ++G ++G+
Sbjct: 224 NFLLDDDSVSNQDIRAVMAGLRRSNQAGRELLWPWVERNFDALAKKLPRGSSALGRVVGL 283

Query: 69  VTSHFSAPYDLHEVKAFFKDMDVGSGA--RSLEQSLETIE 106
             S FS+   L EV+AF       +    RSL Q+L+TI 
Sbjct: 284 YPSGFSSAELLDEVEAFLARKPKDTPGLRRSLAQALDTIR 323


This domain is functionally uncharacterized. This domain is found in eukaryotes and bacteria. This domain is found to the C-terminus of an aminopeptidase domain. Length = 323

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 128
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 99.75
KOG1046|consensus882 99.73
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 99.17
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 96.94
PF10805106 DUF2730: Protein of unknown function (DUF2730); In 93.46
PF03715299 Noc2: Noc2p family; InterPro: IPR005343 This is a 84.86
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
Probab=99.75  E-value=8.9e-18  Score=120.62  Aligned_cols=105  Identities=33%  Similarity=0.524  Sum_probs=90.7

Q ss_pred             HhHHHHHHHhhcCCCCCCcCcHHHHHHHhc-CCchhHHHHHHHHHHhHHHHHHhhCCCccchhhhHHHhhccCCCHHHHH
Q psy5127           2 RAMDGLLAKSTLDRDVIKPQDVKDVLSVVA-SNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLH   80 (128)
Q Consensus         2 ~~ll~~~L~~~l~~~~v~~qd~~~~~~~v~-~~~~g~~~~~~fl~~n~~~i~~~~~~~~~~~~~~l~~~~~~~~t~~~~~   80 (128)
                      +++++++|+++++++.|+.||+..++.+++ .+|.|++.+|+|+.+||+.|.++++.++..+..++..+++.+||+++++
T Consensus       217 ~~~~~~~l~~~l~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~n~~~i~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  296 (324)
T PF11838_consen  217 PELLKRLLDLLLSNDKVRSQDIRYVLAGLASSNPVGRDLAWEFFKENWDAIIKKFGTNSSALSRVIKSFAGNFSTEEQLD  296 (324)
T ss_dssp             HHHHHHHHHHHHCTSTS-TTTHHHHHHHHH-CSTTCHHHHHHHHHHCHHHHHCHC-TTSHCCHHHHHCCCTT--SHHHHH
T ss_pred             HHHHHHHHHHHcCCcccccHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhccCCCHHHHH
Confidence            478999999999976699999999999998 9999999999999999999999998755578899998999999999999


Q ss_pred             HHHHHHhcCC--CChhHhHHHHHHHHHH
Q psy5127          81 EVKAFFKDMD--VGSGARSLEQSLETIE  106 (128)
Q Consensus        81 ~~~~f~~~~~--~~~~~~~~~~~~e~i~  106 (128)
                      ++++||++++  .++..+++.|++|.||
T Consensus       297 ~~~~f~~~~~~~~~~~~r~l~q~~e~Ir  324 (324)
T PF11838_consen  297 ELEEFFEDKPKPPPGLRRALAQSLETIR  324 (324)
T ss_dssp             HHHHHHHHHCTCCCTTTHHCHHHHHHHH
T ss_pred             HHHHHHhhCcCCChHHHHHHHHHHHhcC
Confidence            9999996544  4577899999999986



The rest of the members of this family are identified as aminopeptidase N of the actinomycete-type. The spectrum of activity may differ somewhat from the aminopeptidase N clade of Escherichia coli and most other proteobacteria, which are well separated phylogenetically within the M1 family. ; PDB: 3MDJ_A 2YD0_A 3QNF_C 3RJO_A 1Z5H_A 3Q7J_A 1Z1W_A 3SE6_B.

>KOG1046|consensus Back     alignment and domain information
>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins Back     alignment and domain information
>PF03715 Noc2: Noc2p family; InterPro: IPR005343 This is a small family of mainly hypothetical proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query128
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 9e-21
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-20
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 2e-20
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-20
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 3e-20
3rjo_A419 Crystal Structure Of Erap1 Peptide Binding Domain L 1e-15
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 2e-15
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 2e-15
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 2e-15
3se6_A967 Crystal Structure Of The Human Endoplasmic Reticulu 3e-13
4e36_A967 Crystal Structure Of The Human Endoplasmic Reticulu 3e-13
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure

Iteration: 1

Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 3/116 (2%) Query: 12 TLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTS 71 TL+ D+I+ QD + + +N G L W ++++WK L N +G G+FS LI VT Sbjct: 784 TLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTR 843 Query: 72 HFSAPYDLHEVKAFFKDMD---VGSGARSLEQSLETIELNIHWVRRNEELIFQWLS 124 FS Y+L +++ F KD + GSG R+LEQ+LE + NI WV+ N+E++ QW + Sbjct: 844 RFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFT 899
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query128
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 5e-36
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 4e-35
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 9e-34
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 4e-28
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
 Score =  126 bits (318), Expect = 5e-36
 Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 12  TLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTS 71
           +   D IK Q+   +L+++  NP G  LAW+ L+ +W  L   F  G+ S+  ++   T+
Sbjct: 293 SFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTN 352

Query: 72  HFSAPYDLHEVKAFFKDM-DVGSGARSLEQSLETIELNIHWVRRNEELIFQWLSSY 126
            FS    L EVK FF  + + GS  R ++Q++ETIE NI W+ +N + I  WL S 
Sbjct: 353 QFSTRTRLEEVKGFFSSLKENGSQLRCVQQTIETIEENIGWMDKNFDKIRVWLQSE 408


>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query128
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 99.96
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 99.92
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 99.92
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 99.91
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 99.77
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
Probab=99.96  E-value=2.7e-28  Score=179.88  Aligned_cols=126  Identities=33%  Similarity=0.548  Sum_probs=117.3

Q ss_pred             HhHHHHHHHhhcCCCCCCcCcHHHHHHHhcCCchhHHHHHHHHHHhHHHHHHhhCCCccchhhhHHHhhccCCCHHHHHH
Q psy5127           2 RAMDGLLAKSTLDRDVIKPQDVKDVLSVVASNPEGNFLAWRHLKAHWKGLQNLFGNGTFSMGALIGVVTSHFSAPYDLHE   81 (128)
Q Consensus         2 ~~ll~~~L~~~l~~~~v~~qd~~~~~~~v~~~~~g~~~~~~fl~~n~~~i~~~~~~~~~~~~~~l~~~~~~~~t~~~~~~   81 (128)
                      +++++++|+++++++.||+||+..++.++++||.|++++|+|+++||+.|.++++++++.+++++..+++.|+|++++++
T Consensus       283 ~~ll~~~L~~~l~~~~ir~qD~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e  362 (419)
T 3rjo_A          283 KEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEE  362 (419)
T ss_dssp             HHHHHHHHHHHHHTSSSCGGGHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCchhHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHH
Confidence            57899999999988767999999999999999999999999999999999999987777899999999999999999999


Q ss_pred             HHHHHhcCCCCh-hHhHHHHHHHHHHHhHHHHhhCHHHHHHHHhhhc
Q psy5127          82 VKAFFKDMDVGS-GARSLEQSLETIELNIHWVRRNEELIFQWLSSYL  127 (128)
Q Consensus        82 ~~~f~~~~~~~~-~~~~~~~~~e~i~~n~~w~~~~~~~i~~wl~~~~  127 (128)
                      +++||++++..+ ..++++|++|+|+.|++|++++.+.|.+||+++.
T Consensus       363 ~~~Ff~~~~~~~~~~~~~~qale~i~~ni~W~~~~~~~v~~wL~~~~  409 (419)
T 3rjo_A          363 VKGFFSSLKENGSQLRCVQQTIETIEENIGWMDKNFDKIRVWLQSEK  409 (419)
T ss_dssp             HHHHHHTTTTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999987765 6899999999999999999999999999998763



>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00