Psyllid ID: psy5165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLISLHG
Secondary Structure (PSIPRED)
cHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHcccccccccccccccccccEEEEEEEccEEEEEEccccccHHHHHHHHHHHcccccccEEEEEEEcccccccccccHHHHHHHHHHHHccccccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccccHHHHEEEEEEHHHHHcccccccccccccccccccccEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccEEEEEEcccccccEEccHHHHHHHHHHHHHccccEEEEEcccEEEEEccc
Coil and Loop (DISEMBL)
MELEEAIRLYevnhepelvihgnlWTWQWWNKFWrtwapvptlfGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFItyikpditYDRLQEEVKEMCKFSTDQVFTVKwvdeegdpcliSTQMELEEAIRLYevnhepelvihgKSTYLISLHG
Flexible Loop (DISEMBL)
MELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYevnhepelvihgkstYLISLHG
Low Complexity Region (SEG)
MELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLISLHG
Disordered region (IsUnstruct)
******IRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLIS***
Disordered Region (DISOPRED)
****EAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRK***************FLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYL*S***
Disordered Region (DISEMBL)
MELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLISLHG
Disordered Region (DISPRO)
*ELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLISL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELEEAIRLYEVNHEPELVIHGNLWTWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTYLISLHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
Q90XF2	588	Protein kinase C iota typ	yes	N/A	0.420	0.120	0.549	5e-20
Q5R4K9	596	Protein kinase C iota typ	yes	N/A	0.420	0.119	0.535	3e-19
P41743	596	Protein kinase C iota typ	yes	N/A	0.420	0.119	0.535	3e-19
F1M7Y5	596	Protein kinase C iota typ	yes	N/A	0.420	0.119	0.535	7e-19
Q62074	595	Protein kinase C iota typ	yes	N/A	0.420	0.119	0.535	8e-19
Q05513	592	Protein kinase C zeta typ	no	N/A	0.414	0.118	0.471	4e-14
P09217	592	Protein kinase C zeta typ	no	N/A	0.414	0.118	0.471	2e-13
Q02956	592	Protein kinase C zeta typ	no	N/A	0.414	0.118	0.457	3e-12
O19111	591	Protein kinase C zeta typ	no	N/A	0.414	0.118	0.428	3e-11
A8WUG4	597	Protein kinase C-like 3 O	N/A	N/A	0.414	0.117	0.428	5e-11

>sp|Q90XF2|KPCI_DANRE Protein kinase C iota type OS=Danio rerio GN=prkci PE=2 SV=2

 Score = 97.1 bits (240), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 57/71 (80%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+Y+ L  EV++MC    DQ+FT+KW+DEEGDPC +S+Q+ELEEA+RLY
Sbjct: 27  GDIMITHFEPSISYEGLCNEVRDMCSMDNDQLFTMKWIDEEGDPCTVSSQLELEEALRLY 86

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 87  ELNKDSELIIH 97

Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway (By similarity). Is required for the formation and maintenance of the zonula adherens during early epithelial development and plays a critical role in organ morphogenesis and in regulating the orientation of cell division.
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q5R4K9|KPCI_PONAB Protein kinase C iota type OS=Pongo abelii GN=PRKCI PE=2 SV=2

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 57/71 (80%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34  GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 93

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 94  ELNKDSELLIH 104

Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI(3)K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P41743|KPCI_HUMAN Protein kinase C iota type OS=Homo sapiens GN=PRKCI PE=1 SV=2

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 57/71 (80%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34  GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 93

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 94  ELNKDSELLIH 104

Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI(3)K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|F1M7Y5|KPCI_RAT Protein kinase C iota type OS=Rattus norvegicus GN=Prkci PE=1 SV=1

 Score = 93.2 bits (230), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 56/71 (78%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34  GDIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLY 93

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 94  ELNKDSELLIH 104

Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI3K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis. Downstream of PI3K is required for insulin-stimulated glucose transport. Activates RAB4A and promotes its associtation with KIF3A which is required for the insulin-induced SLC2A4/GLUT4 translocation in adipocytes. Is essential in early embryogenesis and development of differentiating photoreceptors by playing a role in the establishment of epithelial and neuronal polarity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q62074|KPCI_MOUSE Protein kinase C iota type OS=Mus musculus GN=Prkci PE=1 SV=3

 Score = 93.2 bits (230), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 56/71 (78%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34  GDIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLY 93

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 94  ELNKDSELLIH 104

Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI3K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis (By similarity). Downstream of PI3K is required for insulin-stimulated glucose transport. Activates RAB4A and promotes its associtation with KIF3A which is required for the insulin-induced SLC2A4/GLUT4 translocation in adipocytes. Is essential in early embryogenesis and development of differentiating photoreceptors by playing a role in the establishment of epithelial and neuronal polarity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q05513|KPCZ_HUMAN Protein kinase C zeta type OS=Homo sapiens GN=PRKCZ PE=1 SV=4

 Score = 77.4 bits (189), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 46/70 (65%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++FIT +    T++ L EEV++MC+       T+KWVD EGDPC +S+QMELEEA RL  
Sbjct: 25  DIFITSVDAATTFEELCEEVRDMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLAR 84

Query: 149 VNHEPELVIH 158
              +  L+IH
Sbjct: 85  QCRDEGLIIH 94

Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukines production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P09217|KPCZ_RAT Protein kinase C zeta type OS=Rattus norvegicus GN=Prkcz PE=1 SV=2

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 44/70 (62%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT + P  T+  L EEV++MC        T+KWVD EGDPC +S+QMELEEA RL  
Sbjct: 25  DILITSVDPTTTFQDLCEEVRDMCGLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLAC 84

Query: 149 VNHEPELVIH 158
              +  L+IH
Sbjct: 85  QGRDEVLIIH 94

Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukines production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q02956|KPCZ_MOUSE Protein kinase C zeta type OS=Mus musculus GN=Prkcz PE=1 SV=2

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 43/70 (61%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT +    T+  L EEV++MC        T+KWVD EGDPC +S+QMELEEA RL  
Sbjct: 25  DILITSVDAMTTFKDLCEEVRDMCGLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLVC 84

Query: 149 VNHEPELVIH 158
              +  L+IH
Sbjct: 85  QGRDEVLIIH 94

Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells (By similarity). In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukines production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|O19111|KPCZ_RABIT Protein kinase C zeta type OS=Oryctolagus cuniculus GN=PRKCZ PE=2 SV=1

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 44/70 (62%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++FIT +    T++ L EEV++MC        T+KWVD EGDP  +S+QMEL EA RL  
Sbjct: 25  DIFITSVDAATTFEELCEEVRDMCGLHQHHPLTLKWVDSEGDPRTVSSQMELGEAFRLAG 84

Query: 149 VNHEPELVIH 158
            + +  L++H
Sbjct: 85  QHRDDGLILH 94

Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions in phosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukines production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|A8WUG4|KPC3_CAEBR Protein kinase C-like 3 OS=Caenorhabditis briggsae GN=pkc-3 PE=3 SV=1

 Score = 67.0 bits (162), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 43/70 (61%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           +V + Y +P +  D     +++ CK    Q  TVKW+DE+GDP  I +QMEL+EA+R   
Sbjct: 22  QVVVLYARPPLILDDFFALLRDACKQHAKQDITVKWIDEDGDPISIDSQMELDEAVRCLN 81

Query: 149 VNHEPELVIH 158
           V+ E EL IH
Sbjct: 82  VSQEAELNIH 91

Required for the normal progression of embryogenesis and viability of the organism. Plays an indispensable role in establishing embryonic polarity and in recruiting and maintaining par-6 to the periphery, through interaction with par-3. Required for epithelial cell polarity in the distal spermatheca. Phosphorylates serine residues of num-1.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
242022063	98	conserved hypothetical protein [Pediculu	0.431	0.744	0.616	7e-21
270011887	626	hypothetical protein TcasGA2_TC005978 [T	0.461	0.124	0.589	2e-20
328713256	588	PREDICTED: protein kinase C iota type-li	0.420	0.120	0.633	1e-19
432917944	769	PREDICTED: protein kinase C iota type-li	0.414	0.091	0.557	1e-19
157125996	122	hypothetical protein AaeL_AAEL010352 [Ae	0.426	0.590	0.625	3e-19
47223111	602	unnamed protein product [Tetraodon nigro	0.414	0.116	0.557	3e-19
118792855	135	AGAP011993-PA [Anopheles gambiae str. PE	0.420	0.525	0.661	3e-19
312374098	198	hypothetical protein AND_16475 [Anophele	0.420	0.358	0.613	7e-19
402860990	690	PREDICTED: protein kinase C iota type [P	0.414	0.101	0.542	7e-19
332818337	690	PREDICTED: protein kinase C iota type [P	0.414	0.101	0.542	9e-19

>gi|242022063|ref|XP_002431461.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516749|gb|EEB18723.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 61/73 (83%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            E  ITYI   IT+D+L +E++++CKFS+DQ+FT+KW+D+EGDPC +S QMEL+EAIRLY
Sbjct: 18  GEKMITYINQQITFDQLCDEMRDICKFSSDQLFTMKWIDDEGDPCTLSNQMELDEAIRLY 77

Query: 148 EVNHEPELVIHGK 160
           +VN E ELV+H K
Sbjct: 78  DVNKESELVVHDK 90

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011887|gb|EFA08335.1| hypothetical protein TcasGA2_TC005978 [Tribolium castaneum]

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/78 (58%), Positives = 61/78 (78%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           EV ITYI   IT++ L +EV  +C+F+ +Q+FT+KWVDEEGDPC+ISTQMEL+EA+RLYE
Sbjct: 519 EVLITYIDQSITFEELLQEVVVICRFAPNQLFTMKWVDEEGDPCIISTQMELDEALRLYE 578

Query: 149 VNHEPELVIHGKSTYLIS 166
           VN + E+ IH     L+S
Sbjct: 579 VNRDNEVTIHDWKLLLVS 596

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713256|ref|XP_003245026.1| PREDICTED: protein kinase C iota type-like [Acyrthosiphon pisum]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 59/71 (83%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            EV ITYI P IT ++L+ E+  +C+FS+DQ FT+KWVDEEGDPC++STQMEL+EA+RLY
Sbjct: 17  GEVMITYINPKITVEKLRYEMMVICRFSSDQDFTMKWVDEEGDPCILSTQMELDEAVRLY 76

Query: 148 EVNHEPELVIH 158
           E+N + EL IH
Sbjct: 77  ELNKDSELTIH 87

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432917944|ref|XP_004079575.1| PREDICTED: protein kinase C iota type-like [Oryzias latipes]

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 57/70 (81%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT+ +P I+Y+ L  EV++MC    DQ+FT+KW+DEEGDPC +S+Q+ELEEA+RLYE
Sbjct: 29  DIMITHFEPSISYEGLSGEVRDMCSMENDQLFTMKWIDEEGDPCTVSSQLELEEALRLYE 88

Query: 149 VNHEPELVIH 158
           +N + EL+IH
Sbjct: 89  LNKDSELIIH 98

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157125996|ref|XP_001654485.1| hypothetical protein AaeL_AAEL010352 [Aedes aegypti] gi|108873459|gb|EAT37684.1| AAEL010352-PA [Aedes aegypti]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 57/72 (79%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            EV ITYI   ITY+ L  E++++C+F+ DQVFT+KWVDEE DPC I + +EL+EAIRLY
Sbjct: 30  GEVMITYIDESITYEGLCREIRDICRFAPDQVFTMKWVDEENDPCTIQSDLELDEAIRLY 89

Query: 148 EVNHEPELVIHG 159
           EVN + ELVIHG
Sbjct: 90  EVNRDSELVIHG 101

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47223111|emb|CAG07198.1| unnamed protein product [Tetraodon nigroviridis]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 57/70 (81%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT+ +P I+Y+ L  EV++MC    DQ+FT+KW+DEEGDPC +S+Q+ELEEA+RLYE
Sbjct: 20  DIMITHFEPSISYEGLYGEVRDMCSMDNDQLFTMKWIDEEGDPCTVSSQLELEEALRLYE 79

Query: 149 VNHEPELVIH 158
           +N + EL+IH
Sbjct: 80  LNKDSELIIH 89

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|118792855|ref|XP_320539.3| AGAP011993-PA [Anopheles gambiae str. PEST] gi|116117099|gb|EAA00497.3| AGAP011993-PA [Anopheles gambiae str. PEST]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 55/71 (77%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            EV ITYI   ITYD L  E++E+C+FS DQVFT+KWVDEE DPC I +  EL+EAIRLY
Sbjct: 30  GEVMITYIDESITYDGLCREMREICRFSPDQVFTMKWVDEENDPCTIQSDTELDEAIRLY 89

Query: 148 EVNHEPELVIH 158
           EVN + ELVIH
Sbjct: 90  EVNRDSELVIH 100

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374098|gb|EFR21739.1| hypothetical protein AND_16475 [Anopheles darlingi]

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 57/75 (76%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            EV ITYI   I+Y+ L  E++E+C+FS DQVFT+KWVDEE DPC I + +EL+EAIRLY
Sbjct: 29  GEVMITYIDESISYEGLCREMREICRFSPDQVFTMKWVDEENDPCTIQSDIELDEAIRLY 88

Query: 148 EVNHEPELVIHGKST 162
           EVN + ELVIH  S 
Sbjct: 89  EVNRDSELVIHAISA 103

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|402860990|ref|XP_003894897.1| PREDICTED: protein kinase C iota type [Papio anubis]

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct: 129 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 188

Query: 149 VNHEPELVIH 158
           +N + EL+IH
Sbjct: 189 LNKDSELLIH 198

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332818337|ref|XP_526377.3| PREDICTED: protein kinase C iota type [Pan troglodytes]

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct: 129 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 188

Query: 149 VNHEPELVIH 158
           +N + EL+IH
Sbjct: 189 LNKDSELLIH 198

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
UNIPROTKB|Q91569	588	prkci "Protein kinase C subspe	0.414	0.119	0.585	6.2e-20
ZFIN|ZDB-GENE-011105-1	588	prkci "protein kinase C, iota"	0.414	0.119	0.557	1.3e-19
UNIPROTKB|E1BWA3	599	PRKCI "Uncharacterized protein	0.414	0.116	0.557	1.7e-19
UNIPROTKB|P41743	596	PRKCI "Protein kinase C iota t	0.414	0.117	0.542	6e-19
UNIPROTKB|Q5R4K9	596	PRKCI "Protein kinase C iota t	0.414	0.117	0.542	6e-19
UNIPROTKB|F1MQ96	672	PRKCI "Uncharacterized protein	0.414	0.104	0.542	7.6e-19
UNIPROTKB|F1PG28	703	PRKCI "Uncharacterized protein	0.414	0.099	0.542	8.3e-19
MGI|MGI:99260	595	Prkci "protein kinase C, iota"	0.414	0.117	0.542	1.3e-18
RGD|620961	596	Prkci "protein kinase C, iota"	0.414	0.117	0.542	1.3e-18
FB|FBgn0261854	608	aPKC "atypical protein kinase	0.414	0.115	0.571	4.6e-18

UNIPROTKB|Q91569 prkci "Protein kinase C subspecies lambda/iota" [Xenopus laevis (taxid:8355)]

 Score = 245 (91.3 bits), Expect = 6.2e-20, P = 6.2e-20
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P IT+D L  EV++MC F  DQ FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    28 DIMITHFEPSITFDGLCNEVRDMCSFENDQPFTMKWIDEEGDPCTVSSQLELEEAFRLYE 87

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    88 LNKDSELLIH 97

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005543 "phospholipid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0045216 "cell-cell junction organization" evidence=ISS

ZFIN|ZDB-GENE-011105-1 prkci "protein kinase C, iota" [Danio rerio (taxid:7955)]

 Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 39/70 (55%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+Y+ L  EV++MC    DQ+FT+KW+DEEGDPC +S+Q+ELEEA+RLYE
Sbjct:    28 DIMITHFEPSISYEGLCNEVRDMCSMDNDQLFTMKWIDEEGDPCTVSSQLELEEALRLYE 87

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    88 LNKDSELIIH 97

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016332 "establishment or maintenance of polarity of embryonic epithelium" evidence=IMP

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0001841 "neural tube formation" evidence=IGI

GO:0060041 "retina development in camera-type eye" evidence=IMP

GO:0031226 "intrinsic to plasma membrane" evidence=IDA

GO:0042476 "odontogenesis" evidence=IMP

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0060042 "retina morphogenesis in camera-type eye" evidence=IGI;IMP

GO:0007097 "nuclear migration" evidence=IGI;IMP

GO:0048699 "generation of neurons" evidence=IGI;IMP

GO:0007420 "brain development" evidence=IMP

GO:0007405 "neuroblast proliferation" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0005829 "cytosol" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0045216 "cell-cell junction organization" evidence=ISS

GO:0005543 "phospholipid binding" evidence=ISS

GO:0007502 "digestive tract mesoderm development" evidence=IMP

GO:0008078 "mesodermal cell migration" evidence=IMP

GO:0000132 "establishment of mitotic spindle orientation" evidence=IMP

GO:0048546 "digestive tract morphogenesis" evidence=IMP

GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP

GO:0034332 "adherens junction organization" evidence=IMP

GO:0034334 "adherens junction maintenance" evidence=IMP

GO:0005915 "zonula adherens" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0045217 "cell-cell junction maintenance" evidence=IMP

GO:0021744 "dorsal motor nucleus of vagus nerve development" evidence=IMP

GO:0045199 "maintenance of epithelial cell apical/basal polarity" evidence=IMP

UNIPROTKB|E1BWA3 PRKCI "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 241 (89.9 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 39/70 (55%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ ITY +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    38 DIMITYFEPSISFEGLCSEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 97

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    98 LNKDSELLIH 107

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IEA

GO:0035089 "establishment of apical/basal cell polarity" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IEA

GO:0043220 "Schmidt-Lanterman incisure" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0046326 "positive regulation of glucose import" evidence=IEA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0060252 "positive regulation of glial cell proliferation" evidence=IEA

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=IEA

UNIPROTKB|P41743 PRKCI "Protein kinase C iota type" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 6.0e-19, P = 6.0e-19
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    35 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 94

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    95 LNKDSELLIH 104

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0031252 "cell leading edge" evidence=IEA

GO:0035089 "establishment of apical/basal cell polarity" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IEA

GO:0043220 "Schmidt-Lanterman incisure" evidence=IEA

GO:0048194 "Golgi vesicle budding" evidence=IEA

GO:0070555 "response to interleukin-1" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;TAS

GO:0005524 "ATP binding" evidence=TAS

GO:0005543 "phospholipid binding" evidence=IDA

GO:0045216 "cell-cell junction organization" evidence=IMP;TAS

GO:0046903 "secretion" evidence=NAS

GO:0006612 "protein targeting to membrane" evidence=NAS

GO:0000133 "polarisome" evidence=TAS

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=TAS

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=NAS

GO:0016044 "cellular membrane organization" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010976 "positive regulation of neuron projection development" evidence=IMP

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IDA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=IMP

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IMP

GO:0060252 "positive regulation of glial cell proliferation" evidence=IMP

GO:0005886 "plasma membrane" evidence=TAS

GO:0034329 "cell junction assembly" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0070830 "tight junction assembly" evidence=TAS

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=ISS

GO:0046326 "positive regulation of glucose import" evidence=ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISS

GO:0004697 "protein kinase C activity" evidence=ISS

UNIPROTKB|Q5R4K9 PRKCI "Protein kinase C iota type" [Pongo abelii (taxid:9601)]

 Score = 236 (88.1 bits), Expect = 6.0e-19, P = 6.0e-19
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    35 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 94

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    95 LNKDSELLIH 104

GO:0004672 "protein kinase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0010976 "positive regulation of neuron projection development" evidence=ISS

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISS

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISS

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=ISS

GO:0060252 "positive regulation of glial cell proliferation" evidence=ISS

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=ISS

UNIPROTKB|F1MQ96 PRKCI "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 236 (88.1 bits), Expect = 7.6e-19, P = 7.6e-19
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:   111 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 170

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:   171 LNKDSELLIH 180

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=IEA

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

GO:0060252 "positive regulation of glial cell proliferation" evidence=IEA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0046326 "positive regulation of glucose import" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0043220 "Schmidt-Lanterman incisure" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IEA

GO:0035089 "establishment of apical/basal cell polarity" evidence=IEA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1PG28 PRKCI "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 236 (88.1 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 38/70 (54%), Positives = 57/70 (81%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:   142 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 201

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:   202 LNKDSELLIH 211

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

MGI|MGI:99260 Prkci "protein kinase C, iota" [Mus musculus (taxid:10090)]

 Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 38/70 (54%), Positives = 56/70 (80%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    35 DIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLYE 94

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    95 LNKDSELLIH 104

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004697 "protein kinase C activity" evidence=ISO;IDA

GO:0005524 "ATP binding" evidence=ISO

GO:0005543 "phospholipid binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005768 "endosome" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005923 "tight junction" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007015 "actin filament organization" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0016477 "cell migration" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0031252 "cell leading edge" evidence=ISO

GO:0032869 "cellular response to insulin stimulus" evidence=ISO;IMP

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISO

GO:0034613 "cellular protein localization" evidence=ISO

GO:0035089 "establishment of apical/basal cell polarity" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IMP

GO:0043220 "Schmidt-Lanterman incisure" evidence=IDA

GO:0043234 "protein complex" evidence=ISO

GO:0043434 "response to peptide hormone stimulus" evidence=ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISO

GO:0045177 "apical part of cell" evidence=IDA

GO:0045216 "cell-cell junction organization" evidence=ISO

GO:0046326 "positive regulation of glucose import" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048194 "Golgi vesicle budding" evidence=ISO

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=ISO

GO:0060252 "positive regulation of glial cell proliferation" evidence=ISO

GO:0070555 "response to interleukin-1" evidence=ISO

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IMP

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=ISO

RGD|620961 Prkci "protein kinase C, iota" [Rattus norvegicus (taxid:10116)]

 Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 38/70 (54%), Positives = 56/70 (80%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT+ +P I+++ L  EV++MC F  +Q FT+KW+DEEGDPC +S+Q+ELEEA RLYE
Sbjct:    35 DIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLYE 94

Query:   149 VNHEPELVIH 158
             +N + EL+IH
Sbjct:    95 LNKDSELLIH 104

GO:0003674 "molecular_function" evidence=ND

GO:0004672 "protein kinase activity" evidence=ISO;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004697 "protein kinase C activity" evidence=ISO;IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0005543 "phospholipid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=IEA

GO:0005829 "cytosol" evidence=ISO;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007015 "actin filament organization" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=ISO;ISS

GO:0016324 "apical plasma membrane" evidence=IEA;ISO

GO:0016477 "cell migration" evidence=IMP

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0031252 "cell leading edge" evidence=IDA

GO:0032869 "cellular response to insulin stimulus" evidence=ISO;IMP

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISO;ISS

GO:0034613 "cellular protein localization" evidence=IMP

GO:0035089 "establishment of apical/basal cell polarity" evidence=IEA;ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IEA;ISO

GO:0043220 "Schmidt-Lanterman incisure" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=IDA

GO:0043434 "response to peptide hormone stimulus" evidence=IDA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISO;ISS

GO:0045177 "apical part of cell" evidence=ISO

GO:0045216 "cell-cell junction organization" evidence=IEA;ISO

GO:0046326 "positive regulation of glucose import" evidence=IEA;ISO

GO:0048194 "Golgi vesicle budding" evidence=IDA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=ISO;ISS

GO:0060252 "positive regulation of glial cell proliferation" evidence=ISO;ISS

GO:0070555 "response to interleukin-1" evidence=IMP

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA;ISO

GO:2000353 "positive regulation of endothelial cell apoptotic process" evidence=ISO;ISS

GO:0005923 "tight junction" evidence=IDA

FB|FBgn0261854 aPKC "atypical protein kinase C" [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query:    89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
             ++ IT I  +I+Y+ L  E++ +C+F  DQ FT+KWVDEE DPC IST+MEL+EAIRLYE
Sbjct:    40 QIIITTINKNISYEELCYEIRNICRFPLDQPFTIKWVDEENDPCTISTKMELDEAIRLYE 99

Query:   149 VNHEPELVIH 158
             +N + +LVIH
Sbjct:   100 MNFDSQLVIH 109

GO:0004697 "protein kinase C activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;NAS

GO:0045186 "zonula adherens assembly" evidence=NAS;TAS

GO:0016332 "establishment or maintenance of polarity of embryonic epithelium" evidence=IMP;NAS

GO:0045179 "apical cortex" evidence=IDA;NAS

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IMP;NAS;TAS

GO:0045196 "establishment or maintenance of neuroblast polarity" evidence=IMP;NAS

GO:0007294 "germarium-derived oocyte fate determination" evidence=IMP

GO:0007613 "memory" evidence=IMP

GO:0035003 "subapical complex" evidence=TAS

GO:0055059 "asymmetric neuroblast division" evidence=IGI

GO:0007043 "cell-cell junction assembly" evidence=NAS

GO:0016324 "apical plasma membrane" evidence=NAS;TAS

GO:0045176 "apical protein localization" evidence=NAS

GO:0045167 "asymmetric protein localization involved in cell fate determination" evidence=IPI

GO:0007309 "oocyte axis specification" evidence=TAS

GO:0007163 "establishment or maintenance of cell polarity" evidence=NAS

GO:0001738 "morphogenesis of a polarized epithelium" evidence=TAS

GO:0030011 "maintenance of cell polarity" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005938 "cell cortex" evidence=TAS

GO:0007416 "synapse assembly" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0016327 "apicolateral plasma membrane" evidence=IDA

GO:0007423 "sensory organ development" evidence=IMP

GO:0007314 "oocyte anterior/posterior axis specification" evidence=IGI

GO:0002052 "positive regulation of neuroblast proliferation" evidence=IMP

GO:0046667 "compound eye retinal cell programmed cell death" evidence=IDA

GO:0016334 "establishment or maintenance of polarity of follicular epithelium" evidence=IMP

GO:0090163 "establishment of epithelial cell planar polarity" evidence=IGI;IMP

GO:0003382 "epithelial cell morphogenesis" evidence=IGI;IMP

GO:0010592 "positive regulation of lamellipodium assembly" evidence=IMP

GO:0051491 "positive regulation of filopodium assembly" evidence=IMP

GO:0060446 "branching involved in open tracheal system development" evidence=IMP

GO:0035011 "melanotic encapsulation of foreign target" evidence=IMP

GO:0000132 "establishment of mitotic spindle orientation" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q90XF2	KPCI_DANRE	2, ., 7, ., 1, 1, ., 1, 3	0.5492	0.4201	0.1207	yes	N/A
P41743	KPCI_HUMAN	2, ., 7, ., 1, 1, ., 1, 3	0.5352	0.4201	0.1191	yes	N/A
F1M7Y5	KPCI_RAT	2, ., 7, ., 1, 1, ., 1, 3	0.5352	0.4201	0.1191	yes	N/A
Q62074	KPCI_MOUSE	2, ., 7, ., 1, 1, ., 1, 3	0.5352	0.4201	0.1193	yes	N/A
Q5R4K9	KPCI_PONAB	2, ., 7, ., 1, 1, ., 1, 3	0.5352	0.4201	0.1191	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	169
cd06404	83	cd06404, PB1_aPKC, PB1 domain is an essential modu	5e-34
cd05992	81	cd05992, PB1, The PB1 domain is a modular domain m	6e-14
smart00666	81	smart00666, PB1, PB1 domain	2e-13
pfam00564	84	pfam00564, PB1, PB1 domain	1e-09
cd06404	83	cd06404, PB1_aPKC, PB1 domain is an essential modu	9e-05
cd06398	91	cd06398, PB1_Joka2, The PB1 domain is present in t	6e-04

>gnl|CDD|99725 cd06404, PB1_aPKC, PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells

 Score =  114 bits (288), Expect = 5e-34
 Identities = 42/71 (59%), Positives = 54/71 (76%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT I P I+ + L  EV++MC+F  DQ FT+KW+DEEGDPC IS+QMELEEA RLY
Sbjct: 9   GDIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLY 68

Query: 148 EVNHEPELVIH 158
           E+N + EL IH
Sbjct: 69  ELNKDSELNIH 79

PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The aPKC protein contains a type I/II PB1 domain. Length = 83

>gnl|CDD|99716 cd05992, PB1, The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity

 Score = 63.1 bits (154), Expect = 6e-14
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
                 +   I+++ L+ ++ E         F +K+ DE+GD   IS+  +LEEAI    
Sbjct: 11  IRRFVVVSRSISFEDLRSKIAEKFGLD-AVSFKLKYPDEDGDLVTISSDEDLEEAIEEAR 69

Query: 149 VNHEPELVIH 158
            +   +L + 
Sbjct: 70  RSGSKKLRLF 79

A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as a noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. Length = 81

>gnl|CDD|214770 smart00666, PB1, PB1 domain

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
           E     +  DI+++ L+ +V +      +Q FT+K+ DE+GD   +++  +LEEAI  Y+
Sbjct: 11  ETRRLSVPRDISFEDLRSKVAKRFGLD-NQSFTLKYQDEDGDLVSLTSDEDLEEAIEEYD 69

Query: 149 VNHEPELVIH 158
                +L +H
Sbjct: 70  SLGSKKLRLH 79

Phox and Bem1p domain, present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate. Length = 81

>gnl|CDD|215996 pfam00564, PB1, PB1 domain

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 92  ITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNH 151
              + P I+++ L+ +V++         F +K+ DE+GD   I++  +LEEAI       
Sbjct: 15  FLSVSPGISFEELRSKVEQRFG-LDRVDFKLKYPDEDGDLVSITSDEDLEEAIEEARSLG 73

Query: 152 EPELVIH 158
              L +H
Sbjct: 74  SKTLRLH 80

Length = 84

>gnl|CDD|99725 cd06404, PB1_aPKC, PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 15/21 (71%), Positives = 17/21 (80%)

Query: 1  MELEEAIRLYEVNHEPELVIH 21
          MELEEA RLYE+N + EL IH
Sbjct: 59 MELEEAFRLYELNKDSELNIH 79

PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The aPKC protein contains a type I/II PB1 domain. Length = 83

>gnl|CDD|99720 cd06398, PB1_Joka2, The PB1 domain is present in the Nicotiana plumbaginifolia Joka2 protein which interacts with sulfur stress inducible UP9 protein

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 15/50 (30%), Positives = 29/50 (58%)

Query: 96  KPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIR 145
           + D+  D L+E+V+E+   S D   ++ + DE+GD   +    +L +AI+
Sbjct: 22  QLDLNMDGLREKVEELFSLSPDADLSLTYTDEDGDVVTLVDDNDLTDAIQ 71

The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
cd06404	83	PB1_aPKC PB1 domain is an essential modular domain	100.0
KOG0695|consensus	593		99.97
cd06396	81	PB1_NBR1 The PB1 domain is an essential part of NB	99.83
cd06407	82	PB1_NLP A PB1 domain is present in NIN like protei	99.82
cd06408	86	PB1_NoxR The PB1 domain is present in the Epichloe	99.81
cd06402	87	PB1_p62 The PB1 domain is an essential part of p62	99.7
smart00666	81	PB1 PB1 domain. Phox and Bem1p domain, present in	99.54
PF00564	84	PB1: PB1 domain; InterPro: IPR000270 The Phox and	99.51
cd05992	81	PB1 The PB1 domain is a modular domain mediating s	99.5
cd06398	91	PB1_Joka2 The PB1 domain is present in the Nicotia	99.05
cd06401	81	PB1_TFG The PB1 domain found in TFG protein, an on	98.88
cd06397	82	PB1_UP1 Uncharacterized protein 1. The PB1 domain	98.78
cd06409	86	PB1_MUG70 The MUG70 protein is a product of the me	98.08
cd06403	80	PB1_Par6 The PB1 domain is an essential part of Pa	97.84
cd06410	97	PB1_UP2 Uncharacterized protein 2. The PB1 domain	97.15
cd06405	79	PB1_Mekk2_3 The PB1 domain is present in the two m	95.96
cd06406	80	PB1_P67 A PB1 domain is present in p67 proteins wh	95.76
KOG0695|consensus	593		95.53
cd06395	91	PB1_Map2k5 PB1 domain is essential part of the mit	94.2
PF06970	76	RepA_N: Replication initiator protein A (RepA) N-t	88.13
PF14430	127	Imm1: Immunity protein Imm1	80.77

>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells

Probab=100.00  E-value=1.7e-40  Score=244.64  Aligned_cols=83  Identities=51%  Similarity=0.869  Sum_probs=81.0

Q ss_pred             eehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEee
Q psy5165          80 LHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus        80 l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIHv  159 (169)
                      +++|++|+||+|+++++++++||+||+|+|++|+|.++|+||+||+||||||||||||+||+||+|||++||||+|+|||
T Consensus         1 i~~K~~y~gdi~it~~d~~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~~EL~EA~rl~~~n~~~~l~ihv   80 (83)
T cd06404           1 VRVKAAYNGDIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLYELNKDSELNIHV   80 (83)
T ss_pred             CeEEEEecCcEEEEEcCCCcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCHHHHHHHHHHHHhcCcccEEEEe
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eee
Q psy5165         160 KST  162 (169)
Q Consensus       160 f~~  162 (169)
                      ||.
T Consensus        81 fp~   83 (83)
T cd06404          81 FPG   83 (83)
T ss_pred             cCC
Confidence            984

PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,

>KOG0695|consensus

Probab=99.97  E-value=6.5e-32  Score=245.28  Aligned_cols=94  Identities=39%  Similarity=0.633  Sum_probs=87.8

Q ss_pred             ccccccccccceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165          69 SYCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus        69 ~~~~~~~~t~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      +-++....-+.++.|++|+||+|+++++++++||+||+++||||+++++|+||+||||||||||||||||||+||+||++
T Consensus         5 t~~~~~g~~~~vrlka~y~g~i~i~~~~p~~~~e~~~~~vrd~c~~h~~q~~t~kwideegdp~tv~sqmeleea~r~~~   84 (593)
T KOG0695|consen    5 TDPKMEGSGGRVRLKAHYGGDIFITSVDPATTFEELCEEVRDMCRLHQQQPLTLKWIDEEGDPCTVSSQMELEEAFRLAR   84 (593)
T ss_pred             CCcccCCCCccEEEEEeecCcEEEEeccCcccHHHHHHHHHHHHHHhhcCCceeEeecCCCCcceechhhhHHHHHHHHH
Confidence            33444445568899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeeee
Q psy5165         149 VNHEPELVIHGKST  162 (169)
Q Consensus       149 LnKDSELlIHvf~~  162 (169)
                      +++|+||+|||||+
T Consensus        85 ~~~d~el~ihvf~~   98 (593)
T KOG0695|consen   85 QCRDEELIIHVFPS   98 (593)
T ss_pred             hccccceEEEEccC
Confidence            99999999999986

>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62

Probab=99.83  E-value=6.6e-21  Score=139.66  Aligned_cols=75  Identities=20%  Similarity=0.196  Sum_probs=69.1

Q ss_pred             ehhhhccceeEEEecCC--CCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEe
Q psy5165          81 HCYFIIFSEVFITYIKP--DITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIH  158 (169)
Q Consensus        81 ~~k~~y~GDimitsle~--sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIH  158 (169)
                      .+|+.|+||++++.+++  +.++++|+.++++.|+|+   +|++||+|||||||++|||+||+||+|+++-+. ..|.+-
T Consensus         2 ~vKaty~~d~~rf~~~~~~~~~~~~L~~ev~~rf~l~---~f~lKYlDde~e~v~lssd~eLeE~~rl~~~~~-~~l~~~   77 (81)
T cd06396           2 NLKVTYNGESQSFLVSDSENTTWASVEAMVKVSFGLN---DIQIKYVDEENEEVSVNSQGEYEEALKSAVRQG-NLLQMN   77 (81)
T ss_pred             EEEEEECCeEEEEEecCCCCCCHHHHHHHHHHHhCCC---cceeEEEcCCCCEEEEEchhhHHHHHHHHHhCC-CEEEEE
Confidence            57999999999999999  889999999999999999   999999999999999999999999999999876 445554


Q ss_pred             e
Q psy5165         159 G  159 (169)
Q Consensus       159 v  159 (169)
                      |
T Consensus        78 v   78 (81)
T cd06396          78 V   78 (81)
T ss_pred             E
Confidence            4

A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The NBR1 protein contains a type I PB1 domain.

>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium)

Probab=99.82  E-value=4e-20  Score=133.79  Aligned_cols=77  Identities=18%  Similarity=0.333  Sum_probs=73.2

Q ss_pred             ehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEE
Q psy5165          81 HCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVI  157 (169)
Q Consensus        81 ~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlI  157 (169)
                      .+|+.|+||++++.+.++++|++|++++++.|++++.|.|++||+|||||||++++|.+|+||++++..++.+.+-+
T Consensus         2 ~vK~~~~~d~~r~~l~~~~~~~~L~~~i~~r~~~~~~~~f~LkY~Ddegd~v~ltsd~DL~eai~i~~~~~~~~v~l   78 (82)
T cd06407           2 RVKATYGEEKIRFRLPPSWGFTELKQEIAKRFKLDDMSAFDLKYLDDDEEWVLLTCDADLEECIDVYRSSGSHTIRL   78 (82)
T ss_pred             EEEEEeCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCeeEEEEECCCCCeEEeecHHHHHHHHHHHHHCCCCeEEE
Confidence            57999999999999999999999999999999999889999999999999999999999999999999998886554

The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte

>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA

Probab=99.81  E-value=4e-20  Score=136.82  Aligned_cols=68  Identities=18%  Similarity=0.312  Sum_probs=64.7

Q ss_pred             ceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhc
Q psy5165          79 TLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEV  149 (169)
Q Consensus        79 ~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeL  149 (169)
                      .+.+|++|+||++++.++++|+|++||+++|+.|+|.  |+||+||.|| |||||+|||++|++|++.+.-
T Consensus         2 ~ikVKv~~~~Dv~~i~v~~~i~f~dL~~kIrdkf~~~--~~~~iKykDE-GD~iti~sq~DLd~Ai~~a~~   69 (86)
T cd06408           2 KIRVKVHAQDDTRYIMIGPDTGFADFEDKIRDKFGFK--RRLKIKMKDD-GDMITMGDQDDLDMAIDTARS   69 (86)
T ss_pred             cEEEEEEecCcEEEEEcCCCCCHHHHHHHHHHHhCCC--CceEEEEEcC-CCCccccCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999995  7999999999 999999999999999998874

NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is

>cd06402 PB1_p62 The PB1 domain is an essential part of p62 scaffold protein (alias sequestosome 1,SQSTM) involved in cell signaling, receptor internalization, and protein turnover

Probab=99.70  E-value=4.4e-17  Score=120.51  Aligned_cols=67  Identities=27%  Similarity=0.339  Sum_probs=59.0

Q ss_pred             hhhhccc-----eeEEEecCCC--CChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165          82 CYFIIFS-----EVFITYIKPD--ITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus        82 ~k~~y~G-----Dimitsle~s--IsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      +|++..|     +|..+++++.  ++|++||++++++|.+..+|+||+||.||||||||||||+||.+|+....
T Consensus         3 vkayl~~~~~~~EIRRf~l~~~~~~s~~~L~~~V~~~f~~l~~~~ftlky~DeeGDlvtIssdeEL~~A~~~~~   76 (87)
T cd06402           3 VKAYLLGKDANAEIRRFAIDEDVSTSYEYLVEKVAAVFPSLRGKNFQLFWKDEEGDLVAFSSDEELVMALGSLN   76 (87)
T ss_pred             EEEeecCCCCccceEEEEecCCCCcCHHHHHHHHHHHccccCCCcEEEEEECCCCCEEeecCHHHHHHHHHcCC
Confidence            4556644     7888888655  48999999999999999999999999999999999999999999987765

The PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.

>smart00666 PB1 PB1 domain

Probab=99.54  E-value=2.9e-14  Score=98.14  Aligned_cols=80  Identities=26%  Similarity=0.369  Sum_probs=74.6

Q ss_pred             eehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEee
Q psy5165          80 LHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus        80 l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIHv  159 (169)
                      +.+|+.|+|++.+..++++++|++|++++.+.+.+.. +.|++||.|||||.++++++.+|.+|++.+..++...|.||+
T Consensus         2 ~~vK~~~~~~~~~~~~~~~~s~~dL~~~i~~~~~~~~-~~~~l~Y~Dedgd~v~l~sd~Dl~~a~~~~~~~~~~~l~l~v   80 (81)
T smart00666        2 VDVKLRYGGETRRLSVPRDISFEDLRSKVAKRFGLDN-QSFTLKYQDEDGDLVSLTSDEDLEEAIEEYDSLGSKKLRLHV   80 (81)
T ss_pred             ccEEEEECCEEEEEEECCCCCHHHHHHHHHHHhCCCC-CCeEEEEECCCCCEEEecCHHHHHHHHHHHHHcCCceEEEEe
Confidence            5678999999999999999999999999999999876 579999999999999999999999999999998888888887


Q ss_pred             e
Q psy5165         160 K  160 (169)
Q Consensus       160 f  160 (169)
                      +
T Consensus        81 ~   81 (81)
T smart00666       81 F   81 (81)
T ss_pred             C
Confidence            5

Phox and Bem1p domain, present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.

>PF00564 PB1: PB1 domain; InterPro: IPR000270 The Phox and Bem1p domain, is present in many eukaryotic cytoplasmic signalling proteins

Probab=99.51  E-value=7e-14  Score=96.01  Aligned_cols=82  Identities=23%  Similarity=0.355  Sum_probs=75.6

Q ss_pred             ceehhhhccceeEE-EecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEE
Q psy5165          79 TLHCYFIIFSEVFI-TYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVI  157 (169)
Q Consensus        79 ~l~~k~~y~GDimi-tsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlI  157 (169)
                      |+.+|+.|+|++.. ..+.++++|++|.++++..+.+. ...|+++|.|+|||.++|++|.+|.+|+..+.-.+...|.+
T Consensus         1 t~~vK~~~~~~~~~~~~~~~~~s~~~L~~~i~~~~~~~-~~~~~l~Y~D~dgD~V~i~sd~Dl~~a~~~~~~~~~~~lrl   79 (84)
T PF00564_consen    1 TVRVKVRYGGDIRRIISLPSDVSFDDLRSKIREKFGLL-DEDFQLKYKDEDGDLVTISSDEDLQEAIEQAKESGSKTLRL   79 (84)
T ss_dssp             SEEEEEEETTEEEEEEEECSTSHHHHHHHHHHHHHTTS-TSSEEEEEEETTSSEEEESSHHHHHHHHHHHHHCTTSCEEE
T ss_pred             CEEEEEEECCeeEEEEEcCCCCCHHHHHHHHHHHhCCC-CccEEEEeeCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEE
Confidence            46789999999999 99999999999999999999998 66899999999999999999999999999998866668888


Q ss_pred             eeee
Q psy5165         158 HGKS  161 (169)
Q Consensus       158 Hvf~  161 (169)
                      |+..
T Consensus        80 ~v~~   83 (84)
T PF00564_consen   80 FVQD   83 (84)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            8864

The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.; GO: 0005515 protein binding; PDB: 1IPG_A 1IP9_A 2KFK_A 1WMH_A 1VD2_A 1WI0_A 1OEY_C 1PQS_A 1Q1O_A 1TZ1_A ....

>cd05992 PB1 The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity

Probab=99.50  E-value=7.7e-14  Score=95.23  Aligned_cols=79  Identities=23%  Similarity=0.278  Sum_probs=73.5

Q ss_pred             ehhhhccceeEEEecC-CCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEee
Q psy5165          81 HCYFIIFSEVFITYIK-PDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus        81 ~~k~~y~GDimitsle-~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIHv  159 (169)
                      .+|+.|+|++....++ ++++|++|++++++.+.+.. +.|+++|.|||||.++++++.+|++|++.+..+...-|.|++
T Consensus         2 ~vK~~~~~~~~~~~~~~~~~s~~~L~~~i~~~~~~~~-~~~~l~y~D~e~d~v~l~sd~Dl~~a~~~~~~~~~~~l~l~v   80 (81)
T cd05992           2 RVKVKYGGEIRRFVVVSRSISFEDLRSKIAEKFGLDA-VSFKLKYPDEDGDLVTISSDEDLEEAIEEARRSGSKKLRLFV   80 (81)
T ss_pred             cEEEEecCCCEEEEEecCCCCHHHHHHHHHHHhCCCC-CcEEEEeeCCCCCEEEeCCHHHHHHHHHHHhhcCCccEEEEe
Confidence            5789999999999999 99999999999999999987 789999999999999999999999999999987778788876


Q ss_pred             e
Q psy5165         160 K  160 (169)
Q Consensus       160 f  160 (169)
                      +
T Consensus        81 ~   81 (81)
T cd05992          81 F   81 (81)
T ss_pred             C
Confidence            4

A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as a noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.

>cd06398 PB1_Joka2 The PB1 domain is present in the Nicotiana plumbaginifolia Joka2 protein which interacts with sulfur stress inducible UP9 protein

Probab=99.05  E-value=1e-09  Score=81.15  Aligned_cols=77  Identities=22%  Similarity=0.275  Sum_probs=68.3

Q ss_pred             eehhhhccceeEEEecCC-----CCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhh-hhcCCCC
Q psy5165          80 LHCYFIIFSEVFITYIKP-----DITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRL-YEVNHEP  153 (169)
Q Consensus        80 l~~k~~y~GDimitsle~-----sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRL-yeLnKDS  153 (169)
                      +.+|+.|+|++..+.++.     +++|++|.+|+++..+++...-|+++|.||+||-.+++++.+|+||+.. +...+..
T Consensus         1 l~vKv~y~~~~rRf~l~~~~~~~d~~~~~L~~kI~~~f~l~~~~~~~l~Y~Dedgd~V~l~~D~DL~~a~~~~~~~~~~~   80 (91)
T cd06398           1 LVVKVKYGGTLRRFTFPVAENQLDLNMDGLREKVEELFSLSPDADLSLTYTDEDGDVVTLVDDNDLTDAIQYFCSGSRLN   80 (91)
T ss_pred             CEEEEEeCCEEEEEEeccccccCCCCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCEEEEccHHHHHHHHHHHhccCCCc
Confidence            457999999999999996     6999999999999999999889999999999999999999999999998 4555444


Q ss_pred             cEE
Q psy5165         154 ELV  156 (169)
Q Consensus       154 ELl  156 (169)
                      -|-
T Consensus        81 ~lr   83 (91)
T cd06398          81 PLR   83 (91)
T ss_pred             eEE
Confidence            333

The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module

>cd06401 PB1_TFG The PB1 domain found in TFG protein, an oncogenic gene product and fusion partner to nerve growth factor tyrosine kinase receptor TrkA and to the tyrosine kinase ALK

Probab=98.88  E-value=3.4e-09  Score=78.39  Aligned_cols=69  Identities=25%  Similarity=0.274  Sum_probs=62.0

Q ss_pred             eehhhhccceeEEEecCC-CCChhHHHHHHHHhhc--cCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165          80 LHCYFIIFSEVFITYIKP-DITYDRLQEEVKEMCK--FSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus        80 l~~k~~y~GDimitsle~-sIsfE~LC~evRd~C~--f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      +.+|+.|+||+...++++ +++|.+|.+.++...+  |++..-|++|+-|+|||-.||+|..||..|+...+
T Consensus         1 ~iiK~~~g~DiR~~~~~~~~~t~~~L~~~v~~~F~~~~~~~~~flIKYkD~dGDlVTIts~~dL~~A~~~~~   72 (81)
T cd06401           1 LILKAQLGDDIRRIPIHNEDITYDELLLMMQRVFRGKLGSSDDVLIKYKDEDGDLITIFDSSDLSFAIQCSR   72 (81)
T ss_pred             CeEEEEeCCeEEEEeccCccccHHHHHHHHHHHhccccCCcccEEEEEECCCCCEEEeccHHHHHHHHhcCc
Confidence            357999999999999997 5899999999988888  66778899999999999999999999999977664

The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domains of TFG represent a type I/II PB1 domain. The physiological function of TFG remains unknown.

>cd06397 PB1_UP1 Uncharacterized protein 1

Probab=98.78  E-value=2e-08  Score=74.82  Aligned_cols=68  Identities=15%  Similarity=0.232  Sum_probs=64.1

Q ss_pred             ehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhc
Q psy5165          81 HCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEV  149 (169)
Q Consensus        81 ~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeL  149 (169)
                      +-|..|+|+....+++...++++|.+++....+++... |.++++||+||-+|+||..||.||.|+...
T Consensus         2 ~fKv~~~g~~RRf~~~~~pt~~~L~~kl~~Lf~lp~~~-~~vtYiDeD~D~ITlssd~eL~d~~~~~~~   69 (82)
T cd06397           2 QFKSSFLGDTRRIVFPDIPTWEALASKLENLYNLPEIK-VGVTYIDNDNDEITLSSNKELQDFYRLSHR   69 (82)
T ss_pred             eEEEEeCCceEEEecCCCccHHHHHHHHHHHhCCChhH-eEEEEEcCCCCEEEecchHHHHHHHHhccc
Confidence            56889999999999999999999999999999999875 999999999999999999999999997765

The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.

>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain

Probab=98.08  E-value=1.5e-05  Score=59.25  Aligned_cols=74  Identities=19%  Similarity=0.267  Sum_probs=66.0

Q ss_pred             ccceeEEEecCCCCChhHHHHHHHHhhccCCC--ceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEee
Q psy5165          86 IFSEVFITYIKPDITYDRLQEEVKEMCKFSTD--QVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus        86 y~GDimitsle~sIsfE~LC~evRd~C~f~nk--Q~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIHv  159 (169)
                      .+|++....+.++-++++|..++..-.+.+..  ..|.+|++|+|||-..+.++..|.||+.++....-.-+.+|+
T Consensus         8 ~~GrvhRf~~~~s~~~~~L~~~I~~Rl~~d~~~~~~~~L~YlDDEgD~VllT~D~DL~e~v~iar~~g~~~v~L~v   83 (86)
T cd06409           8 PKGRVHRFRLRPSESLEELRTLISQRLGDDDFETHLYALSYVDDEGDIVLITSDSDLVAAVLVARSAGLKKLDLHL   83 (86)
T ss_pred             CCCCEEEEEecCCCCHHHHHHHHHHHhCCccccCCcccEEEEcCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEE
Confidence            38999999999999999999999999988875  789999999999999999999999999999776666566655

The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is

>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells

Probab=97.84  E-value=5.6e-05  Score=56.27  Aligned_cols=64  Identities=11%  Similarity=0.128  Sum_probs=60.4

Q ss_pred             ehhhhccceeEEEecCCC--CChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHh
Q psy5165          81 HCYFIIFSEVFITYIKPD--ITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIR  145 (169)
Q Consensus        81 ~~k~~y~GDimitsle~s--IsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiR  145 (169)
                      ++|..|+++....+++.+  .+|++++..+..+-.+++- +|+++|.|..||-.+|+++.++.+|+.
T Consensus         2 eVKSkfdaEfRRFsl~r~~~~~f~ef~~ll~~lH~l~~~-~f~i~Y~D~~gDLLPInNDdNf~kAls   67 (80)
T cd06403           2 EVKSKFDAEFRRFSLDRNKPGKFEDFYKLLEHLHHIPNV-DFLIGYTDPHGDLLPINNDDNFLKALS   67 (80)
T ss_pred             ceecccCCeEEEEEeccccCcCHHHHHHHHHHHhCCCCC-cEEEEEeCCCCCEecccCcHHHHHHHH
Confidence            578889999999999998  8999999999999999985 899999999999999999999999987

The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The

>cd06410 PB1_UP2 Uncharacterized protein 2

Probab=97.15  E-value=0.0027  Score=47.71  Aligned_cols=76  Identities=18%  Similarity=0.215  Sum_probs=61.2

Q ss_pred             ccccccccceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeee--eccCC-ccccCcHHHHHHHHhhh
Q psy5165          71 CKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWV--DEEGD-PCLISTQMELEEAIRLY  147 (169)
Q Consensus        71 ~~~~~~t~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWV--DEEGD-PCTISSQlELeEAiRLy  147 (169)
                      |+|.++++.-+. -+-+|+..+.+++.++||.+|..++.++|..+..  +++||-  +|+-| -.+++++..|...+.-|
T Consensus         6 G~i~pr~~dg~l-~Y~GG~tr~i~V~r~~s~~el~~kl~~~~~~~~~--~~lky~Lp~edld~Lisv~~DeDl~~M~~e~   82 (97)
T cd06410           6 GRILPRPPDGQL-RYVGGETRIVSVDRSISFKELVSKLSELFGAGVV--VTLKYQLPDEDLDALISVSNDEDLKNMMEEY   82 (97)
T ss_pred             CEEeCcCCCCCE-EEcCCceEEEEEcCCCCHHHHHHHHHHHhCCCCc--eEEEEEcCCCCcceeEEecCcHHHHHHHHhh
Confidence            445544444443 3568999999999999999999999999998866  899997  67777 77999999999888776


Q ss_pred             hc
Q psy5165         148 EV  149 (169)
Q Consensus       148 eL  149 (169)
                      .-
T Consensus        83 ~~   84 (97)
T cd06410          83 DR   84 (97)
T ss_pred             cc
Confidence            63

The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.

>cd06405 PB1_Mekk2_3 The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development

Probab=95.96  E-value=0.023  Score=42.51  Aligned_cols=66  Identities=18%  Similarity=0.223  Sum_probs=55.0

Q ss_pred             eehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcC
Q psy5165          80 LHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVN  150 (169)
Q Consensus        80 l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLn  150 (169)
                      +++|+-|+|+..|.-+.+++-|++|..++.+.|++    +..+.+...| =-+-+-.|.+|+-|+-+...+
T Consensus         1 vRiKfE~~gEKRIi~f~RPvkf~dl~~kv~~afGq----~mdl~ytn~e-L~iPl~~Q~DLDkAie~ld~s   66 (79)
T cd06405           1 VRIKFEHNGEKRIIQFPRPVKFKDLQQKVTTAFGQ----PMDLHYTNNE-LLIPLKNQEDLDRAIELLDRS   66 (79)
T ss_pred             CeEEEEecCceEEEecCCCccHHHHHHHHHHHhCC----eeeEEEeccc-EEEeccCHHHHHHHHHHHccC
Confidence            46899999999999999999999999999999975    4557666655 344456899999999998764

The PB1 domain of MEKK2 (and/or MEKK3) interacts with the PB1 domain of another member of the kinase cascade Map2k5. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, f

>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis

Probab=95.76  E-value=0.032  Score=41.38  Aligned_cols=65  Identities=9%  Similarity=0.169  Sum_probs=53.8

Q ss_pred             ehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhh
Q psy5165          81 HCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY  147 (169)
Q Consensus        81 ~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLy  147 (169)
                      -+|.+|.+ .++....+.++|.+|++++++--++..++ .++.+=||...=....++..|++|+...
T Consensus         4 vvKV~f~~-tIaIrvp~~~~y~~L~~ki~~kLkl~~e~-i~LsYkde~s~~~v~l~d~dle~aws~~   68 (80)
T cd06406           4 VVKVHFKY-TVAIQVARGLSYATLLQKISSKLELPAEH-ITLSYKSEASGEDVILSDTNMEDVWSQA   68 (80)
T ss_pred             EEEEEEEE-EEEEEcCCCCCHHHHHHHHHHHhCCCchh-cEEEeccCCCCCccCcChHHHHHHHHhh
Confidence            46889998 88888999999999999999999998554 7888989775444444889999998764

PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain

>KOG0695|consensus

Probab=95.53  E-value=0.0072  Score=56.78  Aligned_cols=21  Identities=57%  Similarity=0.787  Sum_probs=20.6

Q ss_pred             CchhHHhhhhhccCCCceEEe
Q psy5165           1 MELEEAIRLYEVNHEPELVIH   21 (169)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~   21 (169)
                      ||||||.|+|+.|+|+||.||
T Consensus        74 meleea~r~~~~~~d~el~ih   94 (593)
T KOG0695|consen   74 MELEEAFRLARQCRDEELIIH   94 (593)
T ss_pred             hhHHHHHHHHHhccccceEEE
Confidence            799999999999999999999

>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development

Probab=94.20  E-value=0.089  Score=40.18  Aligned_cols=66  Identities=12%  Similarity=0.247  Sum_probs=49.4

Q ss_pred             eehhhhccceeEEEecC--CCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165          80 LHCYFIIFSEVFITYIK--PDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus        80 l~~k~~y~GDimitsle--~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      |++|.--+|++=- ..+  +.++|.++.+.++++-  ....+....+-||+||-+||-|+.||+-.+.-|.
T Consensus         3 IRIk~p~gg~vDw-~V~~~~~L~F~DvL~~I~~vl--p~aT~tAFeYEDE~gDRITVRSDeEm~AMlsyy~   70 (91)
T cd06395           3 IRIKIPNGGAVDW-TVQSGPQLLFRDVLDVIGQVL--PEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYC   70 (91)
T ss_pred             EEEeCCCCCcccc-cccCcccccHHHHHHHHHHhc--ccccccceeeccccCCeeEecchHHHHHHHHHHH
Confidence            5666666666632 233  4589999999999884  3444445678999999999999999998887553

The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.

>PF06970 RepA_N: Replication initiator protein A (RepA) N-terminus; InterPro: IPR010724 This entry represents the N terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids []

Probab=88.13  E-value=0.36  Score=34.80  Aligned_cols=42  Identities=24%  Similarity=0.341  Sum_probs=32.9

Q ss_pred             HHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165         103 RLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus       103 ~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      -|..-++|-.+++.+    =+||||+|+.+.+-|..|+.|.+..++
T Consensus        25 ~lY~ll~dR~~lS~k----n~wiDe~G~vYi~~s~eel~~~L~~s~   66 (76)
T PF06970_consen   25 ILYSLLLDRLRLSLK----NGWIDENGNVYIIFSIEELMELLNCSK   66 (76)
T ss_pred             HHHHHHHHHHHhhhh----cCcCCCCCCEEEEeeHHHHHHHHCCCH
Confidence            356666666666644    349999999999999999999887654

Most proteins in this entry are bacterial, but archaeal and eukaryotic members are also included.

>PF14430 Imm1: Immunity protein Imm1

Probab=80.77  E-value=4.2  Score=30.77  Aligned_cols=47  Identities=19%  Similarity=0.345  Sum_probs=33.5

Q ss_pred             eeeecc-CCccccCcHHHHHHHHhhhhcCCCC-cEEEee------eeeeeeecCC
Q psy5165         123 KWVDEE-GDPCLISTQMELEEAIRLYEVNHEP-ELVIHG------KSTYLISLHG  169 (169)
Q Consensus       123 KWVDEE-GDPCTISSQlELeEAiRLyeLnKDS-ELlIHv------f~~~~~~~~~  169 (169)
                      +|.|.. |+|..+++..|++++|+...-...+ -..|++      +|.+.+.+||
T Consensus         3 ~~~~~~~~~~~~v~t~~evd~~l~~l~~~~~~~~~~l~~~~~~~~~~~l~vgv~g   57 (127)
T PF14430_consen    3 AWYDRRQGHPVEVATPAEVDELLDRLAGPGGPQVVELWIDGDPWGYPYLGVGVNG   57 (127)
T ss_pred             eEEecCCCCeeEeCCHHHHHHHHHHHhccCCCceEEEEeCCCCCCCceEEEEecC
Confidence            588855 9999999999999999988766644 333443      4555555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	169
1wmh_A	89	Crystal Structure Of A Pb1 Domain Complex Of Protei		4e-20

>pdb|1WMH|A Chain A, Crystal Structure Of A Pb1 Domain Complex Of Protein Kinase C Iota And Par6 Alpha Length = 89

Iteration: 1
 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 15  GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 74
Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 75  ELNKDSELLIH 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
1vd2_A	89	Protein kinase C, IOTA type; PB1 domain, OPCA moti	7e-29
2ktr_A	117	Sequestosome-1; autophagy, NF-KB signaling, HOMO-o	3e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	7e-04

>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A Length = 89

 Score =  101 bits (252), Expect = 7e-29
 Identities = 38/71 (53%), Positives = 57/71 (80%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 15  GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 74

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 75  ELNKDSELLIH 85

>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus} Length = 117

 Score = 37.8 bits (87), Expect = 3e-04
 Identities = 11/45 (24%), Positives = 16/45 (35%)

Query: 100 TYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAI 144
             +RL   V  +        F   +  E GD    S+  EL  A+
Sbjct: 58  PSERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELTMAM 102

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 139 ELEEAIRLYEVNHEPELVIHGKST 162
           +L+ +++LY  +  P L I  K+T
Sbjct: 24  KLQASLKLYADDSAPALAI--KAT 45

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.2 bits (85), Expect = 7e-04
 Identities = 6/23 (26%), Positives = 13/23 (56%)

Query: 2  ELEEAIRLYEVNHEPELVIHGNL 24
          +L+ +++LY  +  P L I   +
Sbjct: 24 KLQASLKLYADDSAPALAIKATM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
1vd2_A	89	Protein kinase C, IOTA type; PB1 domain, OPCA moti	100.0
2bkf_A	87	Zinc-finger protein NBR1 (NEXT to breast cancer 1;	99.55
1wj6_A	101	KIAA0049 protein, RSGI RUH-024; PB1 domain, protei	99.51
2kkc_A	102	Sequestosome-1; P62, PB1, autophagy, ubiquitin-pro	99.36
2ktr_A	117	Sequestosome-1; autophagy, NF-KB signaling, HOMO-o	99.31
1wmh_B	86	Partitioning defective-6 homolog alpha; kinase, PB	98.82
1q1o_A	98	Cell division control protein 24; PB1 domain, PCCR	98.18
1ip9_A	85	BEM1 protein; ubiquitin alpha/beta roll, signaling	97.91
1pqs_A	77	Cell division control protein 24; alpha and beta p	97.59
2cu1_A	103	Mitogen-activated protein kinase kinase kinase 2;	97.29
2npt_B	100	Mitogen-activated protein kinase kinase kinase 2;	95.8
1oey_A	83	P67-PHOX, neutrophil cytosol factor 2; immune syst	95.52
2jrh_A	94	Mitogen-activated protein kinase kinase kinase 3;	95.51
1oey_J	107	P40-PHOX, neutrophil cytosol factor 4; immune syst	95.27
2c60_A	111	Human mitogen-activated protein kinase kinase kina	94.32
2npt_A	106	Dual specificity mitogen-activated protein kinase;	93.42

>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A

Probab=100.00  E-value=2.3e-34  Score=211.27  Aligned_cols=87  Identities=44%  Similarity=0.841  Sum_probs=84.4

Q ss_pred             cccceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcE
Q psy5165          76 ISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPEL  155 (169)
Q Consensus        76 ~t~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSEL  155 (169)
                      ++.++.+|++|+||+++++++++++|++||+++|++|++..+|+||+||+||||||||||||+||+||+|+|++|++++|
T Consensus         3 ~~~~vkvK~~~~gdi~~~~v~~~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~eAl~l~~~n~~~~l   82 (89)
T 1vd2_A            3 LGSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSEL   82 (89)
T ss_dssp             CSSCEEEEEESSSCEEEEEECTTCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHHHHHHHHHHTSCCCE
T ss_pred             CCCeEEEEEEeCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHHHHHHHHHccCCCCE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeeee
Q psy5165         156 VIHGKST  162 (169)
Q Consensus       156 lIHvf~~  162 (169)
                      +|||||.
T Consensus        83 ~ihvf~~   89 (89)
T 1vd2_A           83 LIHVFPC   89 (89)
T ss_dssp             EEEEEEC
T ss_pred             EEEEccC
Confidence            9999994

>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A

Probab=99.55  E-value=5.4e-15  Score=109.16  Aligned_cols=80  Identities=20%  Similarity=0.305  Sum_probs=70.8

Q ss_pred             cceehhhhccceeEEEec--CCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcE
Q psy5165          78 FTLHCYFIIFSEVFITYI--KPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPEL  155 (169)
Q Consensus        78 ~~l~~k~~y~GDimitsl--e~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSEL  155 (169)
                      +++.+|+.|+|+...+.+  +..+++++|-..++..|+++   .|.+||.||||||++|+||.|++||+|+ ..+++.+|
T Consensus         5 ~~v~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~L~---~~~ikY~DEenD~v~i~Sq~E~eEAlkv-a~k~~n~L   80 (87)
T 2bkf_A            5 PQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLN---TIQIKYLDEENEEVSINSQGEYEEALKM-AVKQGNQL   80 (87)
T ss_dssp             CCEEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTCS---SEEEEEECTTSCEEEECSHHHHHHHHHH-HHHTTTEE
T ss_pred             ceEEEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcCCC---ceEEEEEcCCCCEEEEecHHHHHHHHHH-hccCCCEE
Confidence            577889999999999555  55999999999999999998   5699999999999999999999999995 55666779


Q ss_pred             EEeeee
Q psy5165         156 VIHGKS  161 (169)
Q Consensus       156 lIHvf~  161 (169)
                      .+|++-
T Consensus        81 ~m~v~~   86 (87)
T 2bkf_A           81 QMQVHE   86 (87)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            999874

>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2

Probab=99.51  E-value=1.3e-14  Score=109.70  Aligned_cols=83  Identities=19%  Similarity=0.283  Sum_probs=72.7

Q ss_pred             ccceehhhhccceeEEEec--CCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCc
Q psy5165          77 SFTLHCYFIIFSEVFITYI--KPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPE  154 (169)
Q Consensus        77 t~~l~~k~~y~GDimitsl--e~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSE  154 (169)
                      -+++.+|+.|+|+...+.+  +..+++++|-..++..|+++   .|.+||.|||||+++|+||.|++||+|+ ..+++.+
T Consensus        12 ~~~v~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~L~---~~~IkY~DEenD~V~i~Sq~E~eEAlkv-a~k~~n~   87 (101)
T 1wj6_A           12 EPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLN---TIQIKYLDEENEEVSINSQGEYEEALKM-AVKQGNQ   87 (101)
T ss_dssp             CSCEEEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHCCS---SBCCEEECTTSCEECCCSHHHHHHHHHH-HHHHTSE
T ss_pred             CccEEEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcCCC---ceEEEEecCCCCEEEEecHHHHHHHHHH-hccCCCE
Confidence            3567889999999999555  66999999999999999998   5689999999999999999999999995 4566677


Q ss_pred             EEEeeeeee
Q psy5165         155 LVIHGKSTY  163 (169)
Q Consensus       155 LlIHvf~~~  163 (169)
                      |.+||+-+.
T Consensus        88 L~m~V~~~~   96 (101)
T 1wj6_A           88 LQMQVHEGS   96 (101)
T ss_dssp             EEEECCBCC
T ss_pred             EEEEEeecc
Confidence            999998754

>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B

Probab=99.36  E-value=9.6e-13  Score=98.49  Aligned_cols=78  Identities=18%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             ceehhhhcc------ceeEEEecCCC-----------CChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHH
Q psy5165          79 TLHCYFIIF------SEVFITYIKPD-----------ITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELE  141 (169)
Q Consensus        79 ~l~~k~~y~------GDimitsle~s-----------IsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELe  141 (169)
                      .+++|+++.      .++..++++.+           .+|++|+++++++|..-.+..|++||.|||||++|||++.||.
T Consensus         5 ~~~vKayl~~~~~~~~EiRRF~l~~~~~p~~~~~~~~~s~~~L~~~V~~lFp~l~~~~f~l~Y~DedGDlItiSsDeEL~   84 (102)
T 2kkc_A            5 SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELT   84 (102)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEEESSSCSCSSSCCSCCHHHHHHHHHHHHCTTSCSSCEEEEEECTTCCEEEECSHHHHH
T ss_pred             eEEEEEEEccCCCCCCceEEEEeccCCCcccccccccccHHHHHHHHHHHccccCCCcEEEEEECCCCCEEEecCHHHHH
Confidence            357888885      69999998742           4899999999999976667789999999999999999999999


Q ss_pred             HHHhhhhcCCCCcEEEee
Q psy5165         142 EAIRLYEVNHEPELVIHG  159 (169)
Q Consensus       142 EAiRLyeLnKDSELlIHv  159 (169)
                      +|+....   +..|-|.+
T Consensus        85 ~Al~~~~---~~~lRlyV   99 (102)
T 2kkc_A           85 MAMSYVK---DDIFRIYI   99 (102)
T ss_dssp             HHHHHCC---SSEEEEEE
T ss_pred             HHHHhcC---CCeEEEEE
Confidence            9998654   44454544

>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}

Probab=99.31  E-value=3.4e-12  Score=97.98  Aligned_cols=80  Identities=18%  Similarity=0.081  Sum_probs=65.3

Q ss_pred             ccceehhhhcc------ceeEEEecCCC-----------CChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHH
Q psy5165          77 SFTLHCYFIIF------SEVFITYIKPD-----------ITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQME  139 (169)
Q Consensus        77 t~~l~~k~~y~------GDimitsle~s-----------IsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlE  139 (169)
                      ...+++|+++.      +++..++++.+           .+|+.|+++++++|..-.+..|++||.|||||++|||++.|
T Consensus        18 ~~~l~vKayl~~~~~~~~EIRRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lFp~L~~~~f~l~YkDEdGDlItISsDeE   97 (117)
T 2ktr_A           18 MGSLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEE   97 (117)
T ss_dssp             --CEEEEEEEECSSSCEEEEEEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHCTTSCSSCEEEEEECTTCCEEEECSHHH
T ss_pred             cccEEEEEEEecCCCCCCcEEEEEeccCCCccccccccCCCHHHHHHHHHHHccccCCCcEEEEEECCCCCEEEecCHHH
Confidence            34689999996      79999999743           49999999999999555566799999999999999999999


Q ss_pred             HHHHHhhhhcCCCCcEEEee
Q psy5165         140 LEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus       140 LeEAiRLyeLnKDSELlIHv  159 (169)
                      |.+|+....   +..|-|.+
T Consensus        98 L~~Al~~~~---~~~lRlyV  114 (117)
T 2ktr_A           98 LTMAMSYVK---DDIFRIYI  114 (117)
T ss_dssp             HHHHHHHCC---SSEEEEEE
T ss_pred             HHHHHHhcC---CCeEEEEE
Confidence            999998653   34444444

>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2

Probab=98.82  E-value=4.2e-09  Score=77.30  Aligned_cols=72  Identities=8%  Similarity=0.014  Sum_probs=64.0

Q ss_pred             ccccceehhhhccceeEEEecCCC--CChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhh
Q psy5165          75 HISFTLHCYFIIFSEVFITYIKPD--ITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY  147 (169)
Q Consensus        75 ~~t~~l~~k~~y~GDimitsle~s--IsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLy  147 (169)
                      +++..+.+|..|.+|+...+++++  .+||+|+..++.++.+.+. +|+++|.|++||-.+||++.+|.+|+...
T Consensus         2 ~~~~~l~vKskf~aE~RRFs~d~~~~~~fe~f~~lv~~lh~L~~~-~f~i~Y~D~dGDLlpInnDdnl~~Al~~a   75 (86)
T 1wmh_B            2 PHMSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGL-DVLLGYTDAHGDLLPLTNDDSLHRALASG   75 (86)
T ss_dssp             ---CEEEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTCTTC-CCEEEEECTTSCEEECCSHHHHHHHTTSS
T ss_pred             CCCCEEEEEeecCCeeeEeEccCCCCCCHHHHHHHHHHHcCCCCC-CEEEEEECCCCCEeeecCHHHHHHHHHhC
Confidence            466789999999999999999855  8999999999999998655 79999999999999999999999999854

>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B

Probab=98.18  E-value=4.2e-06  Score=62.58  Aligned_cols=78  Identities=19%  Similarity=0.282  Sum_probs=65.3

Q ss_pred             eehhhhcc--------ceeEEEecCCCCChhHHHHHHHHhhccC-CC---ceeeeeeeeccCCccccCcHHHHHHHHhhh
Q psy5165          80 LHCYFIIF--------SEVFITYIKPDITYDRLQEEVKEMCKFS-TD---QVFTVKWVDEEGDPCLISTQMELEEAIRLY  147 (169)
Q Consensus        80 l~~k~~y~--------GDimitsle~sIsfE~LC~evRd~C~f~-nk---Q~FT~KWVDEEGDPCTISSQlELeEAiRLy  147 (169)
                      +.+|++|+        +|+++.-+.++|+|.+|++++++-.++. ++   ..+.+|+-||+||=.|+.+|..|+-|+.-.
T Consensus         6 ikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~~~~~i~~~~klkYkDEdGD~Vtl~sddDl~~A~e~~   85 (98)
T 1q1o_A            6 ILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEML   85 (98)
T ss_dssp             EEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHCSSCCCCCCCEEEECSSSCEEEECSHHHHHHHHHHH
T ss_pred             EEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCCccccccceeEEEEEcCCCCEEEEcCHHHHHHHHHHH
Confidence            88999999        8899999999999999999999988864 22   237899999999999999999999999876


Q ss_pred             hcCCCCcEEE
Q psy5165         148 EVNHEPELVI  157 (169)
Q Consensus       148 eLnKDSELlI  157 (169)
                      .=+...-|.|
T Consensus        86 ~e~~~~~l~I   95 (98)
T 1q1o_A           86 AENNEKFLNI   95 (98)
T ss_dssp             HHTTCCEEEE
T ss_pred             HhhhcCeEEE
Confidence            5444444444

>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A

Probab=97.91  E-value=2.4e-05  Score=57.59  Aligned_cols=74  Identities=19%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             cccccccccceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhh
Q psy5165          70 YCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRL  146 (169)
Q Consensus        70 ~~~~~~~t~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRL  146 (169)
                      ||...+..+.+-+|..|++|+++.-++++|+|++||+++++--..++..++.-| =|.+|+  -+.|+.+|+-|+.-
T Consensus         3 ~~~~~pq~~~~KVK~yy~DDIiAIrvP~di~~~~L~dKi~~RLk~~~~~l~~yk-de~~g~--~i~sD~dl~~aiqr   76 (85)
T 1ip9_A            3 MGSSTSGLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTDNFKLQTKL-FDGSGE--EIKTDSQVSNIIQA   76 (85)
T ss_dssp             CSCCCCCCCCEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSSCEEEEECC-SSSCCS--CCCSHHHHHHHHHT
T ss_pred             cccCCCccCceEEEEEecCcEEEEECCCCCCHHHHHHHHHHHhcccceEEEEec-CCCCCC--cccCHHHHHHHHHh
Confidence            344445557789999999999999999999999999999999999877777776 445888  88999999999863

>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A

Probab=97.59  E-value=0.00011  Score=52.24  Aligned_cols=71  Identities=21%  Similarity=0.334  Sum_probs=56.7

Q ss_pred             ceeEEEecCCCCChhHHHHHHHHhhccC-C---CceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEe
Q psy5165          88 SEVFITYIKPDITYDRLQEEVKEMCKFS-T---DQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIH  158 (169)
Q Consensus        88 GDimitsle~sIsfE~LC~evRd~C~f~-n---kQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIH  158 (169)
                      .|.++..++++|+|.+|.+++++-.+.. +   ...+.+|+-||+||=.|+.+|..|+-|+.-..-+...-|.|-
T Consensus         1 ~D~~~i~V~~~i~f~~L~~kI~~kl~~~~~~~~~~~~~lkYkDEdGD~Vti~sddDl~~A~~~~~~~~~~~leiW   75 (77)
T 1pqs_A            1 SEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNEKFLNIR   75 (77)
T ss_dssp             CCEEEEECTTCCCSHHHHHHHHHHTTTTTSSCSCSTTCCEEEETTTEEEECCSTTHHHHHHHHHHHHCCCEEEEE
T ss_pred             CCEEEEEeCCCCCHHHHHHHHHHHHcccccccccceeEEEEEcCCCCEEEEcCHHHHHHHHHHHHhhhcCeEEEE
Confidence            3778889999999999999999988853 1   245789999999999999999999999986643333334443

>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2

Probab=97.29  E-value=0.00048  Score=52.32  Aligned_cols=77  Identities=17%  Similarity=0.132  Sum_probs=61.9

Q ss_pred             cceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCC-cEE
Q psy5165          78 FTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEP-ELV  156 (169)
Q Consensus        78 ~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDS-ELl  156 (169)
                      ..+++|+-|+|+..|.-++++++|++|..++.++|+.    ..++.+.|-| =-+-+-+|.+|+.|+-++..+... .|-
T Consensus         7 ~dvRiKfE~~GEkRIi~f~RPv~f~eL~~Kv~~~fGq----~ldL~y~n~E-llIpl~sQeDLDkaIellDrss~~kSLr   81 (103)
T 2cu1_A            7 GDVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQ----SMDLHYTNNE-LVIPLTTQDDLDKAVELLDRSIHMKSLK   81 (103)
T ss_dssp             CEEEEEEEETTEEEEEEEESSCCHHHHHHHHHHHHSS----CEEEEECSSS-SCEECCSHHHHHHHHHHHHHCSSCCSEE
T ss_pred             CcEEEEEEecCeEEEEeccCCccHHHHHHHHHHHhCC----eeeEEEecce-EEEeccCHHHHHHHHHHHccCCcccceE
Confidence            4579999999999999999999999999999999986    4678787544 344566999999999998877332 344


Q ss_pred             Eee
Q psy5165         157 IHG  159 (169)
Q Consensus       157 IHv  159 (169)
                      |++
T Consensus        82 IlL   84 (103)
T 2cu1_A           82 ILL   84 (103)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>2npt_B Mitogen-activated protein kinase kinase kinase 2; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2

Probab=95.80  E-value=0.022  Score=43.08  Aligned_cols=69  Identities=17%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             cceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCC
Q psy5165          78 FTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNH  151 (169)
Q Consensus        78 ~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnK  151 (169)
                      ..+++|+-|+|+..|.-+.+++.|++|..++.+.|+..    ..+.+..-| =-+-+-.|.+|+-|+-|...+.
T Consensus        19 ~dvRIKfE~~gEkRIi~f~RPv~f~el~~kv~~afGq~----ldl~y~nnE-L~iPL~~Q~DLDkAvelLDrs~   87 (100)
T 2npt_B           19 NDVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQS----MDLHYTNNE-LVIPLTTQDDLDKAVELLDRSI   87 (100)
T ss_dssp             CCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHTSC----EEEEEEETT-EEEECCCHHHHHHHHHHHHHCS
T ss_pred             cceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe----eeeEEecce-eEEecccHHHHHHHHHHhccCc
Confidence            56799999999999999999999999999999999754    567676433 2344569999999999966553

>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2

Probab=95.52  E-value=0.023  Score=41.02  Aligned_cols=67  Identities=6%  Similarity=0.124  Sum_probs=56.2

Q ss_pred             eehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhh
Q psy5165          80 LHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE  148 (169)
Q Consensus        80 l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLye  148 (169)
                      ..+|.+|. +.+.....+.++|.+|.+++++--.+..+ -.++.+=||++.=..++++..|++|++...
T Consensus         6 ~~VKV~~~-~tvairvp~~~~y~~L~~~l~~kL~l~~~-~~~LsYk~~~s~~~vi~~d~dl~~aw~~~~   72 (83)
T 1oey_A            6 YTLKVHYK-YTVVMKTQPGLPYSQVRDMVSKKLELRLE-HTKLSYRPRDSNELVPLSEDSMKDAWGQVK   72 (83)
T ss_dssp             EEEEEESS-SEEEEEECTTCCHHHHHHHHHHHTTCCGG-GCCEEECCTTCSSCEECCTTTHHHHHTTCB
T ss_pred             EEEEEEEE-EEEEEECCCCCCHHHHHHHHHHHhCCCcc-eeEEEeeCCCCCCeeccChHHHHHHHHhcc
Confidence            57799999 99999999999999999999999999744 467888885544444999999999998743

>2jrh_A Mitogen-activated protein kinase kinase kinase 3; kinase signaling domain, transferase; NMR {Homo sapiens} PDB: 2pph_A

Probab=95.51  E-value=0.039  Score=41.34  Aligned_cols=68  Identities=16%  Similarity=0.271  Sum_probs=55.9

Q ss_pred             ceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCC
Q psy5165          79 TLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNH  151 (169)
Q Consensus        79 ~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnK  151 (169)
                      .+++|+-|+|+..|.-+.+++.|++|..++.+.|+.    ...+.+...| =-+-+-+|.+|+-|+-|...+.
T Consensus         4 dvRIKfE~~gEKRIi~f~RPvkf~dl~qkv~~afGq----~ldl~y~nnE-L~iPL~~Q~DLDkAvelLDrs~   71 (94)
T 2jrh_A            4 DVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQ----PLDLHYMNNE-LSILLKNQDDLDKAIDILDRSS   71 (94)
T ss_dssp             CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHCS----SEEEEEECSS-CEEECCSHHHHHHHHHHHHHST
T ss_pred             ceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCC----eeeeEEecce-eEEeccCHHHHHHHHHHhccCc
Confidence            468999999999999999999999999999999964    4567676433 3445569999999999966553

>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2

Probab=95.27  E-value=0.032  Score=42.59  Aligned_cols=62  Identities=13%  Similarity=0.133  Sum_probs=50.0

Q ss_pred             eeEEEecCCCC----ChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCC
Q psy5165          89 EVFITYIKPDI----TYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEP  153 (169)
Q Consensus        89 Dimitsle~sI----sfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDS  153 (169)
                      ++.-.+++.++    +|++|..-||....-   .-+++++-|.|||-+++.++.+++-+++-...+...
T Consensus        19 ~irdI~veedl~~~P~ykdLl~lmr~~F~~---~DIaLNYrD~eGDLIrilddeDv~lmi~~sr~~~s~   84 (107)
T 1oey_J           19 TIKDIAVEEDLSSTPLLKDLLELTRREFQR---EDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQ   84 (107)
T ss_dssp             EEEEEEECSCTTCCCCHHHHHHHHHHHHCC---SSEEEEEECTTSCEEECCSHHHHHHHHHHCCCCCCT
T ss_pred             eeeeEEEccccccCCCHHHHHHHHHHHhcc---cceeeeeecCCCCEEEEcchHHHHHHHHHhhcCccc
Confidence            33344555543    799999999999883   368999999999999999999999999888665544

>2c60_A Human mitogen-activated protein kinase kinase kinase 3 isoform 2; MAP3K3, MAP/ERK kinase kinase 3, MAPKKK3, MEKK3, serine threonine phosphorylation; HET: MSE; 1.25A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_B

Probab=94.32  E-value=0.1  Score=40.09  Aligned_cols=68  Identities=16%  Similarity=0.259  Sum_probs=55.5

Q ss_pred             cceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcC
Q psy5165          78 FTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVN  150 (169)
Q Consensus        78 ~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLn  150 (169)
                      ..+++|+-|+|+..|.-+.+++.|++|..++.+.|+.    +..+.+...| =-+-+-.|.+|+-|+-|...+
T Consensus        30 ~dvRIKfE~~gEKRIiqf~RPvkf~dl~qkv~~afGq----~ldl~y~nnE-L~IPL~~Q~DLDkAvelLDrs   97 (111)
T 2c60_A           30 SDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQ----PLDLHYMNNE-LSILLKNQDDLDKAIDILDRS   97 (111)
T ss_dssp             CCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHSS----CCEEEEECSS-CEEECCSHHHHHHHHHHHHHC
T ss_pred             cceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCC----eeeeEEecce-EEEecccHHHHHHHHHHhccC
Confidence            4569999999999999999999999999999999965    4556666433 334455999999999996655

>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A

Probab=93.42  E-value=0.27  Score=37.37  Aligned_cols=76  Identities=11%  Similarity=0.214  Sum_probs=55.3

Q ss_pred             cccccccccceehhhhccceeEEEecC--CCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhh
Q psy5165          70 YCKFLHISFTLHCYFIIFSEVFITYIK--PDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY  147 (169)
Q Consensus        70 ~~~~~~~t~~l~~k~~y~GDimitsle--~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLy  147 (169)
                      .++|..-+--|++|.-=+|++= -..+  +.++|.++.+.++++--  ........+-||+||-+||-|+.||+-.+.-|
T Consensus         7 ~~~M~a~~lVIRIk~p~~g~vD-waV~~~~~L~FrDvL~~I~~vmP--~aT~TAFeYEDE~gDRITVRSDeE~kAMlsyy   83 (106)
T 2npt_A            7 FPAMENQVLVIRIKIPNSGAVD-WTVHSGPQLLFRDVLDVIGQVLP--EATTTAFEYEDEDGDRITVRSDEEMKAMLSYY   83 (106)
T ss_dssp             CCCC--CCEEEEEEETTTEEEE-EEECC--CCCHHHHHHHHHHHST--TSCCSEEEEECTTSCEEEECSHHHHHHHHHHH
T ss_pred             ccccccCceEEEEECCCCCccc-cccCCcccccHHHHHHHHHHhCc--cceeeeeeeccccCCeeEEcchHHHHHHHHHH
Confidence            4556666667788877666653 3344  67899999999999853  33334567899999999999999999888765


Q ss_pred             h
Q psy5165         148 E  148 (169)
Q Consensus       148 e  148 (169)
                      .
T Consensus        84 ~   84 (106)
T 2npt_A           84 Y   84 (106)
T ss_dssp             H
T ss_pred             H
Confidence            3

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1wmha_	83	d.15.2.2 (A:) Protein kinase C, iota type {Human (	2e-36
d1wmha_	83	d.15.2.2 (A:) Protein kinase C, iota type {Human (	2e-05
d2bkfa1	85	d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NB	8e-08
d1ip9a_	85	d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker'	1e-07

>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Protein kinase C, iota type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 2e-36
 Identities = 38/71 (53%), Positives = 57/71 (80%)

Query: 88  SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
            ++ IT+ +P I+++ L  EV++MC F  +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 10  GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 69

Query: 148 EVNHEPELVIH 158
           E+N + EL+IH
Sbjct: 70  ELNKDSELLIH 80

>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Protein kinase C, iota type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 14/21 (66%), Positives = 18/21 (85%)

Query: 1  MELEEAIRLYEVNHEPELVIH 21
          +ELEEA RLYE+N + EL+IH
Sbjct: 60 LELEEAFRLYELNKDSELLIH 80

>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Next to BRCA1 gene 1 protein, NBR1 (KIAA0049)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 8e-08
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 98  DITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
           + T+  ++  VK     +T     +K++DEE +   I++Q E EEA+++ 
Sbjct: 25  NTTWADIEAMVKVSFDLNT---IQIKYLDEENEEVSINSQGEYEEALKMA 71

>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 85

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Bud emergence mediator Bemp1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.1 bits (107), Expect = 1e-07
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 89  EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIR 145
           ++F   +K D TY  L+ ++    +  TD  F ++    +G    I T  ++   I+
Sbjct: 22  DIFALMLKGDTTYKELRSKIAP--RIDTDN-FKLQTKLFDGSGEEIKTDSQVSNIIQ 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1wmha_	83	Protein kinase C, iota type {Human (Homo sapiens)	100.0
d1ip9a_	85	Bud emergence mediator Bemp1 {Baker's yeast (Sacch	99.45
d2bkfa1	85	Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Hum	99.34
d1pqsa_	77	Cell division control protein 24, CDC24, C-termina	96.71
d2npta1	105	Mitogen activated protein kinase kinase 5, Map2k5	96.01
d2nptb1	82	Mitogen-activated protein kinase kinase kinase 2,	95.94
d2c60a1	80	Mitogen-activated protein kinase kinase kinase 3,	95.32
d1oeyj_	105	Neutrophil cytosol factor 4 (p40phox component of	80.47

>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Protein kinase C, iota type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-47  Score=278.27  Aligned_cols=83  Identities=46%  Similarity=0.882  Sum_probs=81.6

Q ss_pred             ceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEe
Q psy5165          79 TLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIH  158 (169)
Q Consensus        79 ~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIH  158 (169)
                      ++++|++|+||+|+++++++|+|++||+++|++|+|+++||||+||||||||||||||||||+||||||++||||+|+||
T Consensus         1 ~iriK~~y~G~i~it~~~~~it~e~l~~evr~~C~f~~~q~fT~KWiDeEGDPCTISSQmEL~EA~RLye~n~dseL~iH   80 (83)
T d1wmha_           1 QVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIH   80 (83)
T ss_dssp             CEEEEEEETTEEEEEEECTTCCHHHHHHHHHHHTTCCTTCCCEEEEECTTSCEEECCSHHHHHHHHHHHHHTTCSCEEEE
T ss_pred             CeEEEEEecCeEEEEecCCCccHHHHHHHHHHHhCCCcCCcEEEEEEcCCCCceeeecHHHHHHHHHHHHccCCcceEEE
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eee
Q psy5165         159 GKS  161 (169)
Q Consensus       159 vf~  161 (169)
                      |||
T Consensus        81 VFP   83 (83)
T d1wmha_          81 VFP   83 (83)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            998

>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Bud emergence mediator Bemp1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=9.8e-14  Score=97.55  Aligned_cols=73  Identities=18%  Similarity=0.154  Sum_probs=65.6

Q ss_pred             cccccccccceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHh
Q psy5165          70 YCKFLHISFTLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIR  145 (169)
Q Consensus        70 ~~~~~~~t~~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiR  145 (169)
                      .+-...+...+.+|++|++|++++.++++++|.+|+++++.-.+.+   .|.+||.||+||.|++.++.+|+||++
T Consensus         3 ~~s~~~~~~~ikVKv~~~~D~~~~~l~~~it~~dL~~kI~~rf~~~---~~~lkY~Dedgd~v~i~sD~Dl~~ai~   75 (85)
T d1ip9a_           3 MGSSTSGLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTD---NFKLQTKLFDGSGEEIKTDSQVSNIIQ   75 (85)
T ss_dssp             CSCCCCCCCCEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSS---CEEEEECCSSSCCSCCCSHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEEEECCcEEEEEeCCCCCHHHHHHHHHHHhCCC---ceEEEEEcCCCCEEEEeCHHHHHHHHH
Confidence            3445566778899999999999999999999999999999977543   599999999999999999999999997

>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Next to BRCA1 gene 1 protein, NBR1 (KIAA0049)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=7.1e-13  Score=95.42  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=68.0

Q ss_pred             cceehhhhccceeEEEec--CCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcE
Q psy5165          78 FTLHCYFIIFSEVFITYI--KPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPEL  155 (169)
Q Consensus        78 ~~l~~k~~y~GDimitsl--e~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSEL  155 (169)
                      +++.+|+.|+||+..+.+  +...++++|..+++..++++.   |++||+|+|||.|++++|.||+||++++.- ....+
T Consensus         3 p~vtvKvtf~~dt~RF~ls~~~~~~~~~L~~~i~~rf~l~~---~~lkY~Ddd~e~v~l~~d~dl~E~~~~a~~-~~~~i   78 (85)
T d2bkfa1           3 PQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNT---IQIKYLDEENEEVSINSQGEYEEALKMAVK-QGNQL   78 (85)
T ss_dssp             CCEEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTCSS---EEEEEECTTSCEEEECSHHHHHHHHHHHHH-TTTEE
T ss_pred             ccEEEEEEECCceEEEEecCCCCCcHHHHHHHHHHhcCccc---ceEEEEcCCCCEEEEecHHHHHHHHHHHhc-CCCEE
Confidence            578899999999987654  567899999999999999973   899999999999999999999999999874 45656


Q ss_pred             EEeee
Q psy5165         156 VIHGK  160 (169)
Q Consensus       156 lIHvf  160 (169)
                      .+.|.
T Consensus        79 rl~v~   83 (85)
T d2bkfa1          79 QMQVH   83 (85)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            66553

>d1pqsa_ d.15.2.2 (A:) Cell division control protein 24, CDC24, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Cell division control protein 24, CDC24, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.71  E-value=0.0015  Score=45.64  Aligned_cols=72  Identities=21%  Similarity=0.282  Sum_probs=57.3

Q ss_pred             ceeEEEecCCCCChhHHHHHHHHhhcc-CC--C-ceeeeeeeeccCCccccCcHHHHHHHHhhhhcCCCCcEEEee
Q psy5165          88 SEVFITYIKPDITYDRLQEEVKEMCKF-ST--D-QVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHG  159 (169)
Q Consensus        88 GDimitsle~sIsfE~LC~evRd~C~f-~n--k-Q~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnKDSELlIHv  159 (169)
                      .|+++.-+..+|+|++|.+++..--+. ++  . ..--+|+.||+||=.++.|+.....|+...+-+.+..|.|-+
T Consensus         1 sd~fTLvV~~~i~f~~L~~kI~~Kia~~~~~~~~~~~rlrY~DeDGD~V~i~sddd~~~a~~~~~e~~~~~L~iW~   76 (77)
T d1pqsa_           1 SEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNEKFLNIRL   76 (77)
T ss_dssp             CCEEEEECTTCCCSHHHHHHHHHHTTTTTSSCSCSTTCCEEEETTTEEEECCSTTHHHHHHHHHHHHCCCEEEEEC
T ss_pred             CceEEEEEEcCcCHHHHHHHHHHHHHhccCCCCCccceEEEEcCCCCEEEEeccchHHHHHHHHHhcccceEEEEe
Confidence            378888899999999999998654322 21  1 123799999999999999999999999888777777787755

>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Mitogen activated protein kinase kinase 5, Map2k5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0094  Score=43.61  Aligned_cols=76  Identities=11%  Similarity=0.228  Sum_probs=57.6

Q ss_pred             ccccccccccceehhhhccceeEEEecC--CCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhh
Q psy5165          69 SYCKFLHISFTLHCYFIIFSEVFITYIK--PDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRL  146 (169)
Q Consensus        69 ~~~~~~~~t~~l~~k~~y~GDimitsle--~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRL  146 (169)
                      .|..+..-+--+++|..-+|++= -.++  +.++|.++.+.++++-.  .+.+...++=||+||=+||-|+.||+-.|.-
T Consensus         5 ~~~~m~~q~lVIRI~~~~~~~vD-w~V~~~~~l~F~dvL~~i~q~~p--~at~taFEYEDEdGDRITVRSDEEl~AMisy   81 (105)
T d2npta1           5 PFPAMENQVLVIRIKIPNSGAVD-WTVHSGPQLLFRDVLDVIGQVLP--EATTTAFEYEDEDGDRITVRSDEEMKAMLSY   81 (105)
T ss_dssp             CCCCC--CCEEEEEEETTTEEEE-EEECC--CCCHHHHHHHHHHHST--TSCCSEEEEECTTSCEEEECSHHHHHHHHHH
T ss_pred             cccchhcCceEEEEEcCCCceee-eeecCCceeeHHHHHHHHHHhcc--cccccceeeccccCCEeEEccHHHHHHHHHH
Confidence            35566666667788887666653 3344  58999999999999865  4456667899999999999999999988876


Q ss_pred             h
Q psy5165         147 Y  147 (169)
Q Consensus       147 y  147 (169)
                      |
T Consensus        82 y   82 (105)
T d2npta1          82 Y   82 (105)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Mitogen-activated protein kinase kinase kinase 2, MEKK 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.017  Score=40.62  Aligned_cols=67  Identities=18%  Similarity=0.213  Sum_probs=55.1

Q ss_pred             ceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcC
Q psy5165          79 TLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVN  150 (169)
Q Consensus        79 ~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLn  150 (169)
                      .+++|+-|+|+..|.-+.+++.|++|..+++..|+..    ..+.+..-| =-+-+..|.+|+-|+-|..-+
T Consensus         2 dvRVKfE~~gEkRIi~f~RPv~~~dl~~kv~~afGq~----ldl~y~n~E-L~IPl~~Q~DLDkAvellDrs   68 (82)
T d2nptb1           2 DVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQS----MDLHYTNNE-LVIPLTTQDDLDKAVELLDRS   68 (82)
T ss_dssp             CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHTSC----EEEEEEETT-EEEECCCHHHHHHHHHHHHHC
T ss_pred             CcEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe----eeEEEecCe-EEEecccHHHHHHHHHHHccC
Confidence            3688999999999999999999999999999999754    556666432 234566999999999998655

>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Mitogen-activated protein kinase kinase kinase 3, MEKK 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.019  Score=40.24  Aligned_cols=67  Identities=16%  Similarity=0.287  Sum_probs=55.0

Q ss_pred             ceehhhhccceeEEEecCCCCChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcC
Q psy5165          79 TLHCYFIIFSEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVN  150 (169)
Q Consensus        79 ~l~~k~~y~GDimitsle~sIsfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLn  150 (169)
                      .+++|+-|+|+..|.-+.+++.|++|..+++..|+..    ..+.+..-| =-+-+..|.+|+-|+-|..-+
T Consensus         2 dvRVKfE~~gEkRIi~f~RPv~~~dl~~kv~~afGq~----ldl~y~n~E-l~IPl~~Q~DLDkAvellDrs   68 (80)
T d2c60a1           2 DVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQP----LDLHYMNNE-LSILLKNQDDLDKAIDILDRS   68 (80)
T ss_dssp             CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHSSC----CEEEEECSS-CEEECCSHHHHHHHHHHHHHC
T ss_pred             CcEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe----eeeEEecCe-EEEecccHHHHHHHHHHHccC
Confidence            3678999999999999999999999999999999765    456666433 335567999999999997654

>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.47  E-value=2.7  Score=30.18  Aligned_cols=62  Identities=15%  Similarity=0.142  Sum_probs=49.7

Q ss_pred             cceeEEEecCCCC----ChhHHHHHHHHhhccCCCceeeeeeeeccCCccccCcHHHHHHHHhhhhcCC
Q psy5165          87 FSEVFITYIKPDI----TYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNH  151 (169)
Q Consensus        87 ~GDimitsle~sI----sfE~LC~evRd~C~f~nkQ~FT~KWVDEEGDPCTISSQlELeEAiRLyeLnK  151 (169)
                      .+++.-.+++.++    +|.+|.+-||+...-.   -+++-+.|-|||-+.+-++.+++-.++-..-+.
T Consensus        15 ~~~~rDI~veedl~~~P~ykdLl~lmr~~f~~~---dIaLNYrD~eGDLIRllddeDv~LMv~~~~~~~   80 (105)
T d1oeyj_          15 ISTIKDIAVEEDLSSTPLLKDLLELTRREFQRE---DIALNYRDAEGDLVRLLSDEDVALMVRQARGLP   80 (105)
T ss_dssp             EEEEEEEEECSCTTCCCCHHHHHHHHHHHHCCS---SEEEEEECTTSCEEECCSHHHHHHHHHHCCCCC
T ss_pred             cceeeeEEEccccccCccHHHHHHHHHHHhccc---eeEeeeecCCCCEEEEcchhhHHHHHHHhccCc
Confidence            3555556666655    7999999999998765   579999999999999999999998887654443