Psyllid ID: psy5224
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1178 | 2.2.26 [Sep-21-2011] | |||||||
| P50974 | 512 | NADH-quinone oxidoreducta | yes | N/A | 0.328 | 0.755 | 0.464 | 1e-103 | |
| P29925 | 513 | NADH-quinone oxidoreducta | yes | N/A | 0.314 | 0.721 | 0.472 | 1e-102 | |
| P26848 | 495 | NADH-ubiquinone oxidoredu | N/A | N/A | 0.337 | 0.804 | 0.477 | 1e-99 | |
| Q9ZCG0 | 491 | NADH-quinone oxidoreducta | yes | N/A | 0.317 | 0.761 | 0.492 | 2e-94 | |
| Q92G96 | 493 | NADH-quinone oxidoreducta | yes | N/A | 0.317 | 0.758 | 0.492 | 5e-94 | |
| P93313 | 495 | NADH-ubiquinone oxidoredu | yes | N/A | 0.306 | 0.729 | 0.5 | 1e-92 | |
| P27572 | 495 | NADH-ubiquinone oxidoredu | N/A | N/A | 0.306 | 0.729 | 0.502 | 2e-92 | |
| Q68VV6 | 494 | NADH-quinone oxidoreducta | yes | N/A | 0.317 | 0.757 | 0.481 | 2e-92 | |
| Q4UK26 | 493 | NADH-quinone oxidoreducta | yes | N/A | 0.318 | 0.760 | 0.480 | 6e-92 | |
| Q1RKE5 | 494 | NADH-quinone oxidoreducta | yes | N/A | 0.316 | 0.755 | 0.477 | 7e-91 |
| >sp|P50974|NUOM_RHOCA NADH-quinone oxidoreductase subunit M OS=Rhodobacter capsulatus GN=nuoM PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/409 (46%), Positives = 280/409 (68%), Gaps = 22/409 (5%)
Query: 196 TCITSLIGLLSLVG-APFFSGF-YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITL 253
T +T L+ LL L G P G + +D+ WI ++Y LG+DG+S+ F+ LT F+
Sbjct: 42 TVVTFLVSLLLLAGFDPANPGMQFVEDRA--WI--MGLHYKLGVDGISILFVMLTTFLMP 97
Query: 254 IIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGS 313
+ I + ++ ++ EYM AFL+L L+IG F ALD +LFY+FFEA LIP+F+IIG WGG
Sbjct: 98 LTIASAWHVETRVKEYMIAFLVLEALMIGVFVALDLVLFYLFFEAGLIPMFLIIGIWGGK 157
Query: 314 NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-------SFNI-------LSWHQLSIT 359
R YAA KFFLYT +GS+LML++M+ +Y ++ SF+ L W L T
Sbjct: 158 ERIYAAFKFFLYTFLGSVLMLVAMVAMYMMAGTTDIVTLMSFDFPHADLPFLGWWTL--T 215
Query: 360 KIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSL 419
Q LF+ FF +FA+K+P+WP+HTWLPDAHV+APT GSV+LAA++LK+G YG LRFSL
Sbjct: 216 GGVQTLLFLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAVLLKMGGYGFLRFSL 275
Query: 420 PIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKI 479
P+FP + + + LS ++I+Y SL+A+ Q D+KKLIAYSS+AHMG+VT+GIF +
Sbjct: 276 PMFPVGAETMTTFVFILSAVAIVYTSLVALAQEDMKKLIAYSSVAHMGYVTMGIFAANQQ 335
Query: 480 SIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANC 539
+ GAI QM+SH IS A+F+ +G +Y++M TR I+ +GG++N +P +++ F+ F++AN
Sbjct: 336 GVDGAIFQMLSHGFISGALFLCVGVIYDRMHTREIAAYGGLVNRMPAYALIFMFFTMANV 395
Query: 540 SLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
LPGTSGF+GEF+ +L + N + + ++ +I SAAY+L L + ++F
Sbjct: 396 GLPGTSGFVGEFLTLLGIFQVNTWVALFATSGVILSAAYALWLYRRVVF 444
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rhodobacter capsulatus (taxid: 1061) EC: 1EC: .EC: 6EC: .EC: 9EC: 9EC: .EC: 5 |
| >sp|P29925|NQO13_PARDE NADH-quinone oxidoreductase chain 13 OS=Paracoccus denitrificans GN=nqo13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/385 (47%), Positives = 273/385 (70%), Gaps = 15/385 (3%)
Query: 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLI 280
+ WI + Y +G+DG+S+ F+ LT F+ + IL + ++ K+ EYM AFL+L GL+
Sbjct: 67 EDHAWI--MGVCYKMGVDGISVLFVLLTTFMMPLTILSTWQVQDKVKEYMIAFLVLEGLM 124
Query: 281 IGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL 340
IG F ALD +LFY+FFEA LIP+F+IIG WGG +R YA+ KFFLYT +GS+LML++MI +
Sbjct: 125 IGVFTALDLVLFYLFFEAGLIPMFLIIGIWGGKDRIYASFKFFLYTFLGSVLMLVAMIAM 184
Query: 341 YYISNKS---------FNILSWHQLSITKIE--QIWLFITFFIAFAIKIPIWPMHTWLPD 389
Y ++ + F ++ L +T + Q+ LF+ FF +FA+K+P+WP+HTWLPD
Sbjct: 185 YRMAGTTDIPTLLTFDFPSENFRLLGMTVVGGMQMLLFLAFFASFAVKMPMWPVHTWLPD 244
Query: 390 AHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM 449
AHV+APT GSV+LAA++LK+G YG LRFSLP+FP AS + LS I+I+Y SL+A+
Sbjct: 245 AHVQAPTAGSVLLAAVLLKMGGYGFLRFSLPMFPVASGVAQPYVFWLSAIAIVYTSLVAL 304
Query: 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM 509
Q D+KK+IAYSS+AHMG+VT+G+F +I + GAI QM+SH IS A+F+ +G +Y++M
Sbjct: 305 AQSDMKKVIAYSSVAHMGYVTMGVFAANQIGVDGAIFQMLSHGFISGALFLCVGVIYDRM 364
Query: 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTS 569
TR I +GG++N +P ++ F+ F++AN LPGTSGF+GEF+ ++ + + + ++ +
Sbjct: 365 HTREIDAYGGLVNRMPAYAAVFMFFTMANVGLPGTSGFVGEFLTLMGVFRVDTWVALVAT 424
Query: 570 TALIFSAAYSLCLSKNIIFVLGQMI 594
+ +I SAAY+L L + + LGQ+I
Sbjct: 425 SGVILSAAYALWLYRRV--TLGQLI 447
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Paracoccus denitrificans (taxid: 266) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
| >sp|P26848|NU4M_MARPO NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 365 bits (937), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/419 (47%), Positives = 284/419 (67%), Gaps = 21/419 (5%)
Query: 180 NQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKI-------WIDYFNIY 232
N +R + G IT TSLI L + FF + D K W+ Y NI
Sbjct: 31 NSRVRLIRG------ITIWTSLITFLY---SLFFWIRFENDTAKFQFVETIRWLPYSNIN 81
Query: 233 YFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLILSGLIIGAFCALDGML 291
+++GIDG+SL+F+ LT F+T I IL+ +K EYM AF I +I FC+LD ++
Sbjct: 82 FYIGIDGISLFFVILTTFLTPICILVGFYSVKSYKKEYMIAFFICESFLIAVFCSLDLLI 141
Query: 292 FYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYLYYISNKS-FN 349
FY+FFE+ LIP+FIIIG WG R AA +FFLYTLMGSL ML++++++++ + +
Sbjct: 142 FYVFFESVLIPMFIIIGVWGSRQRKIKAAYQFFLYTLMGSLFMLLAILFIFFQTGTTDLQ 201
Query: 350 ILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKL 409
IL + S + QI L+I FF +F++K+P+ P+H WLP+AHVEAPT GSVILA I+LKL
Sbjct: 202 ILLTTEFS--ERRQILLWIAFFASFSVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKL 259
Query: 410 GCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV 469
G YG LRFS+P+FP+A+ YF+ I TLS+I+IIY SL + QID+KK+IAYSS+AHM FV
Sbjct: 260 GTYGFLRFSIPMFPEATLYFTPFIYTLSVIAIIYTSLTTIRQIDLKKIIAYSSVAHMNFV 319
Query: 470 TLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSV 529
T+G+F L I+G+I+ M+SH L+SSA+F+ +G LY++ KTR++ +GG+++ +P FS
Sbjct: 320 TIGMFSLNIQGIEGSILLMLSHGLVSSALFLCVGALYDRHKTRIVKYYGGLVSTMPIFST 379
Query: 530 FFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
F+ F+LAN SLPGTS FIGEF+I++ A + N + L + +I AAYSL L ++F
Sbjct: 380 IFLFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVF 438
|
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Marchantia polymorpha (taxid: 3197) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q9ZCG0|NUOM_RICPR NADH-quinone oxidoreductase subunit M OS=Rickettsia prowazekii (strain Madrid E) GN=nuoM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 348 bits (893), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 268/380 (70%), Gaps = 6/380 (1%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLI 275
Y ++ W+D + + +G+DG++++F+ LT+F+TLI I+ SL IKK + EY+ FL+
Sbjct: 64 YQFVERYTWLDKIGLEFHVGVDGIAIFFVVLTSFLTLICIIGSLFTIKKYIKEYLVCFLL 123
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ L IGAF +++ +LFY+FFEA L+P++IIIG WGG NR YAA+KFFLYT GS+ L+
Sbjct: 124 MESLCIGAFTSINLLLFYLFFEAILVPMYIIIGVWGGDNRIYAALKFFLYTFFGSVFFLL 183
Query: 336 SMIYLYYISNKSFNILSWHQL--SITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVE 393
++IY+Y SF++ + +L +I Q L+ FIAFAIK P+ P HTWLPDAHV+
Sbjct: 184 ALIYIYS-KIHSFDLTNILELIGNIPLFAQKILWWAIFIAFAIKTPMIPFHTWLPDAHVQ 242
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT GSVILA I+LKLG YG LR LP+FP+AS F+ +I LS+I+IIY SL+A+ Q D
Sbjct: 243 APTTGSVILAGILLKLGGYGFLRVLLPLFPNASQEFAIYVIYLSVIAIIYASLVALAQKD 302
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
IK++IAYSSIAHMG+VT+GIF T+I I GAI QM+SH +ISS++F+ +G LY ++ T+
Sbjct: 303 IKQMIAYSSIAHMGYVTIGIFSFTEIGISGAIFQMLSHGIISSSLFLIVGTLYERLHTKE 362
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
I+ +GG+ N +P + FF+I L++ LP TSGFIGEF+ +L K N + + +I
Sbjct: 363 IAKYGGVANKMPILATFFMIAMLSSIGLPSTSGFIGEFLSLLGIYKVNVVTAFIAALGII 422
Query: 574 FSAAYSLCLSKNIIFVLGQM 593
A Y L L K ++ LG++
Sbjct: 423 LGAVYMLKLYKEVM--LGEI 440
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rickettsia prowazekii (strain Madrid E) (taxid: 272947) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
| >sp|Q92G96|NUOM_RICCN NADH-quinone oxidoreductase subunit M OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=nuoM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 347 bits (889), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 262/380 (68%), Gaps = 6/380 (1%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLI 275
Y ++ W+D + + +G+DG+S+ F+ LT+F+TLI I+ SL +KK + EY+ FL+
Sbjct: 66 YQFVERYAWLDKIGLEFHVGVDGISILFVVLTSFLTLICIIGSLFTVKKYIKEYLVCFLL 125
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ IGAF +++ +LFY+FFEA L+P++IIIG WGG NR YAA+KFFLYT GS+ L+
Sbjct: 126 MESFCIGAFTSVNLLLFYLFFEAILVPMYIIIGVWGGKNRIYAALKFFLYTFFGSVFFLL 185
Query: 336 SMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVE 393
S+IY+Y SF++ QL+ I Q L+ FIAFA+KIPI P HTWLPDAHV+
Sbjct: 186 SLIYIYS-KMHSFDLTYIFQLTDNIPLFAQQILWWAIFIAFAVKIPIIPFHTWLPDAHVQ 244
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT GSVILA I+LKLG YG LR LP+ P S F+ +I LS+I+IIY SL+A+ Q D
Sbjct: 245 APTSGSVILAGILLKLGGYGFLRVLLPLCPSVSQEFAIYVIYLSVIAIIYASLVALAQKD 304
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
+KK+IAYSSIAHMG+VT+GIF TK + GAI QM+SH +ISS +F+ +G LY ++ T+
Sbjct: 305 MKKMIAYSSIAHMGYVTIGIFSFTKAGVSGAIFQMLSHGVISSCLFLIVGTLYERLHTKE 364
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
I+ +GG+ + +P + FF+I L + LPGTSGFIGEF+ +L K N + + +I
Sbjct: 365 IAKYGGVASKMPVLAAFFMIAMLGSVGLPGTSGFIGEFLSLLGIYKVNVVATFIAALGII 424
Query: 574 FSAAYSLCLSKNIIFVLGQM 593
F A Y L L K ++ LG++
Sbjct: 425 FGAVYMLKLYKEVM--LGEI 442
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rickettsia conorii (strain ATCC VR-613 / Malish 7) (taxid: 272944) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
| >sp|P93313|NU4M_ARATH NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana GN=ND4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 255/366 (69%), Gaps = 5/366 (1%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGA 283
W+ Y NI ++LGIDG+SL+F+ LT F+ I IL+ ++ EY+ AFLI L+I
Sbjct: 74 WLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAV 133
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLIS-MIYLY 341
FC LD +LFY+F E+ LIP+FIIIG WG R AA +FFLYTL+GSL ML++ ++ L+
Sbjct: 134 FCMLDLLLFYVFPESVLIPMFIIIGVWGSRQRKIKAAYQFFLYTLLGSLFMLLAILLILF 193
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
IL + S + QI+L+I FF +FA+K+P+ P+H WLP+AHVEAPT GSVI
Sbjct: 194 QTGTTDLQILLTTEFS--ERRQIFLWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVI 251
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
LA I+LK G YG LRFS+P+FP+A+ F+ I TLS I+IIY SL + QID+KK+IAYS
Sbjct: 252 LAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYS 311
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
S+AHM VT+G+F I G+I+ M+SH L+SSA+F+ +G LY++ KTRL+ +GG++
Sbjct: 312 SVAHMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLV 371
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLC 581
+ +P+FS F F+LAN SLPGTS FIGEF+I++ A + N + L + +I AAYSL
Sbjct: 372 STMPNFSTIFFSFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLW 431
Query: 582 LSKNII 587
L ++
Sbjct: 432 LYNRVV 437
|
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 3 |
| >sp|P27572|NU4M_WHEAT NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 257/366 (70%), Gaps = 5/366 (1%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLA-EYMSAFLILSGLIIGA 283
W+ Y NI+ ++GIDGLSL+F+ LT F+ I IL+ + EY+ AFLI L+I
Sbjct: 74 WLPYENIHLYMGIDGLSLFFVILTTFLIPICILVGWSGMRSFGKEYIIAFLICEFLMIAV 133
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYLYY 342
FC LD +LFY+FFE+ LIP+FIIIG WG R AA +FFLYTL+GS+ ML++++ +
Sbjct: 134 FCMLDLLLFYVFFESVLIPMFIIIGVWGSRQRKIKAAYQFFLYTLLGSVFMLLAILLILL 193
Query: 343 ISNKS-FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
+ + IL + S + QI L+I FF +FA+K+P+ P+H WLP+AHVEAPT GSVI
Sbjct: 194 QTGTTDLQILLTTEFS--ERRQILLWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVI 251
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
LA I+LKLG YG LRFS+P+FP+A+ F+ I TLS I+IIY SL + QID+KK+IAYS
Sbjct: 252 LAGILLKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYS 311
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
S+AHM VT+G+F L I G+I+ M+SH L+SSA+F+ +G LY++ KTRL+ +GG++
Sbjct: 312 SVAHMNLVTIGMFSLNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLV 371
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLC 581
+ +P+FS F F+LAN SLPGTS FIGEF+I++ A + N + L + +I AAYSL
Sbjct: 372 STMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLRALGMILGAAYSLW 431
Query: 582 LSKNII 587
L ++
Sbjct: 432 LYNRVV 437
|
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Triticum aestivum (taxid: 4565) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q68VV6|NUOM_RICTY NADH-quinone oxidoreductase subunit M OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=nuoM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/380 (48%), Positives = 264/380 (69%), Gaps = 6/380 (1%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLI 275
Y ++ W+D + + +GIDG++++F+ LT+F+TLI I+ S+ IKK + EY+ FL+
Sbjct: 67 YQFVERYTWLDKIGLEFHVGIDGIAIFFVVLTSFLTLICIIGSIFTIKKYIKEYLVCFLL 126
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ IGAF A++ +LFY+FFEA L+P++IIIG WGG NR YAA+KFFLYT GS+ L+
Sbjct: 127 MESFCIGAFTAVNLLLFYLFFEAILVPMYIIIGVWGGDNRIYAALKFFLYTFFGSVFFLL 186
Query: 336 SMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVE 393
++IY+Y SF++ L+ I Q L+ T FIAFA+KIP+ P HTWLPDAHV+
Sbjct: 187 ALIYIYS-KIHSFDLTYILALTENIPLFAQKILWWTIFIAFAVKIPMIPFHTWLPDAHVQ 245
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT GSVILA I+LKLG YG LR LP+ P+ S F+ +I LS+I+IIY SL+A+ Q D
Sbjct: 246 APTSGSVILAGILLKLGSYGFLRVLLPLLPNVSQEFAIYVIYLSVIAIIYSSLVALAQKD 305
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
IK++IAYSSIAHMG+VT+GIF T+ I GAI QM+SH ++SS++F+ +G LY ++ T+
Sbjct: 306 IKQMIAYSSIAHMGYVTIGIFSFTETGISGAIFQMLSHGVVSSSLFLIVGTLYERLHTKE 365
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
I+ +GG+ + +P + FF+I L++ LP TSGFIGEF+ +L K N + + +I
Sbjct: 366 IAKYGGVASKMPVLATFFMITMLSSIGLPSTSGFIGEFLSLLGIYKVNVVAACIAALGII 425
Query: 574 FSAAYSLCLSKNIIFVLGQM 593
A Y L L K ++ LG++
Sbjct: 426 LGAVYMLKLYKEVM--LGEI 443
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rickettsia typhi (strain ATCC VR-144 / Wilmington) (taxid: 257363) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
| >sp|Q4UK26|NUOM_RICFE NADH-quinone oxidoreductase subunit M OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=nuoM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (871), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/379 (48%), Positives = 258/379 (68%), Gaps = 4/379 (1%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLI 275
Y ++ W+D + + +G+DG+S++F+ LT+F+TLI I+ SL +KK + EY+ FL+
Sbjct: 66 YQFIERYAWLDKIGLEFHVGVDGISIFFVALTSFLTLICIIGSLFTVKKYIKEYLVCFLL 125
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ IGAF +++ +LFY+FFEA L+P++IIIG WGG NR YAA+KFFLYT GS+ L+
Sbjct: 126 MESFCIGAFTSVNLLLFYLFFEAILVPMYIIIGVWGGENRIYAALKFFLYTFFGSVFFLL 185
Query: 336 SMIYLY-YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEA 394
S+IY+Y I N + +I Q L+ FIAFA+KIPI P HTWLPDAHV+A
Sbjct: 186 SLIYIYSKIHNFDLTYIPELTGNIPLFTQQILWWAIFIAFAVKIPIIPFHTWLPDAHVQA 245
Query: 395 PTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454
PT GSVILA I+LK G YG LR LP+F S F+ +I LS+I+IIY SL+A+ Q D+
Sbjct: 246 PTSGSVILAGILLKFGGYGFLRVLLPLFSSVSQEFAIYVIYLSVIAIIYASLVALAQKDM 305
Query: 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514
KK+IAYSSIAHMG+VT+GIF T+ + GAI QM+SH +ISS +F+ +G LY ++ T+ I
Sbjct: 306 KKMIAYSSIAHMGYVTIGIFSFTEAGVSGAIFQMLSHGVISSCLFLIVGTLYERLHTKEI 365
Query: 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIF 574
+ +GG+ + +P + FF+I L + LPGTSGFIGEF+ +L K N + + +I
Sbjct: 366 AKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYKVNVIATFIAALGIIL 425
Query: 575 SAAYSLCLSKNIIFVLGQM 593
A Y L L K ++ LG++
Sbjct: 426 GAVYMLKLYKEVM--LGEI 442
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
| >sp|Q1RKE5|NUOM_RICBR NADH-quinone oxidoreductase subunit M OS=Rickettsia bellii (strain RML369-C) GN=nuoM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 336 bits (861), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 263/381 (69%), Gaps = 8/381 (2%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLI 275
Y ++ W+D + + +GIDG+S++F+ LT+F+TLI I+ SL +KK + EY+ FL+
Sbjct: 66 YQFVERYSWLDKIGLEFHVGIDGISIFFVSLTSFLTLICIIGSLFTVKKYIKEYLVCFLL 125
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ IGAF +++ ++FY+FFE L+P++IIIG WGG NR YAA+KFFLYT GS+ L+
Sbjct: 126 MESFCIGAFTSINLLVFYLFFEVILVPMYIIIGVWGGENRIYAAVKFFLYTFFGSVFFLL 185
Query: 336 SMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHV 392
S+IY+Y SF++ + + + ++QI L+ FIAFAIKIP+ P HTWLPDAHV
Sbjct: 186 SIIYIYS-KIHSFDLSNIGEFTNNFPLHVQQI-LWWAIFIAFAIKIPMIPFHTWLPDAHV 243
Query: 393 EAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452
+APT GSVILA I+LKLG YG LR LP+ P+AS F+ +I LS+I+IIY SL+A+ Q
Sbjct: 244 QAPTSGSVILAGILLKLGGYGFLRVLLPLLPNASQEFAIYVIWLSVIAIIYASLVALAQK 303
Query: 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTR 512
D+KK+IAYSSI HMG+VT+GIF T + GA+ QM+SH +ISS +F+ +G LY ++ T+
Sbjct: 304 DMKKMIAYSSITHMGYVTIGIFSFTDSGVSGALFQMLSHGIISSCLFLIVGTLYERLHTK 363
Query: 513 LISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTAL 572
I+ +GG+ + +P + FF+I L + LPGTSGFIGEF+ +L K N L + +
Sbjct: 364 EIAKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYKVNVIATFLAALGI 423
Query: 573 IFSAAYSLCLSKNIIFVLGQM 593
I A Y L L K ++ LG++
Sbjct: 424 ILGAIYMLKLYKEVM--LGEI 442
|
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Rickettsia bellii (strain RML369-C) (taxid: 336407) EC: 1 EC: . EC: 6 EC: . EC: 9 EC: 9 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1178 | ||||||
| 399020468 | 496 | proton-translocating NADH-quinone oxidor | 0.315 | 0.75 | 0.675 | 1e-147 | |
| 340786793 | 494 | NADH-ubiquinone oxidoreductase subunit M | 0.330 | 0.787 | 0.636 | 1e-141 | |
| 300311107 | 496 | NADH dehydrogenase I subunit M [Herbaspi | 0.315 | 0.75 | 0.651 | 1e-138 | |
| 395763166 | 499 | NADH dehydrogenase I subunit M [Janthino | 0.311 | 0.735 | 0.642 | 1e-138 | |
| 415906406 | 488 | NADH-quinone oxidoreductase subunit M [H | 0.315 | 0.762 | 0.651 | 1e-138 | |
| 329907894 | 500 | NADH-ubiquinone oxidoreductase chain M [ | 0.312 | 0.736 | 0.650 | 1e-137 | |
| 409405602 | 496 | transmembrane NADH dehydrogenase I subun | 0.315 | 0.75 | 0.648 | 1e-137 | |
| 398835062 | 497 | proton-translocating NADH-quinone oxidor | 0.315 | 0.748 | 0.643 | 1e-137 | |
| 293603931 | 500 | NADH-quinone oxidoreductase subunit M [A | 0.325 | 0.766 | 0.592 | 1e-137 | |
| 152980305 | 496 | NADH dehydrogenase I subunit M [Janthino | 0.312 | 0.741 | 0.644 | 1e-137 |
| >gi|399020468|ref|ZP_10722598.1| proton-translocating NADH-quinone oxidoreductase, chain M [Herbaspirillum sp. CF444] gi|398094883|gb|EJL85237.1| proton-translocating NADH-quinone oxidoreductase, chain M [Herbaspirillum sp. CF444] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/373 (67%), Positives = 310/373 (83%), Gaps = 1/373 (0%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLI 275
Y +K WID FNI YFLGIDGLSLWFIPLTAFIT+I++L + I+K++A+YM AFLI
Sbjct: 64 YQFVEKTPWIDRFNISYFLGIDGLSLWFIPLTAFITVIVVLAGWEVIQKRVAQYMGAFLI 123
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
LSGL+IG F ALDGMLFY+FFEATLIP+FII+G WGG+NR YAA KFFLYTL+GSLLMLI
Sbjct: 124 LSGLMIGVFSALDGMLFYVFFEATLIPMFIIVGVWGGANRVYAAFKFFLYTLLGSLLMLI 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
++IYLY +S SF I +WHQL ++ IEQ LF F +AFA+K+P+WP+HTWLPDAHVEAP
Sbjct: 184 ALIYLYIVSGGSFEIPTWHQLPLSMIEQKLLFFAFLMAFAVKVPMWPVHTWLPDAHVEAP 243
Query: 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
T GS++LAAIMLKLG YG LRFSLPI PDAS+ S +ITLSL+++IYI L+A+VQ D+K
Sbjct: 244 TGGSIVLAAIMLKLGAYGFLRFSLPIAPDASHALSGFMITLSLVAVIYIGLVALVQQDMK 303
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
KL+AYSSIAHMGFVTLG FM +++QG I QMISH +S AMF+SIG LY++M TR I+
Sbjct: 304 KLVAYSSIAHMGFVTLGFFMFNDMAVQGGIAQMISHGFVSGAMFMSIGVLYDRMHTREIA 363
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
+GG++N +P F+ FFI+FSLANC LP TSGF+GEFM+IL AVKFNF IG+L++TALI
Sbjct: 364 QYGGVVNKMPRFAAFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLSATALILG 423
Query: 576 AAYSLCLSKNIIF 588
AAYSL L+K +IF
Sbjct: 424 AAYSLWLTKRVIF 436
|
Source: Herbaspirillum sp. CF444 Species: Herbaspirillum sp. CF444 Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|340786793|ref|YP_004752258.1| NADH-ubiquinone oxidoreductase subunit M [Collimonas fungivorans Ter331] gi|340552060|gb|AEK61435.1| NADH-ubiquinone oxidoreductase chain M [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/404 (63%), Positives = 322/404 (79%), Gaps = 15/404 (3%)
Query: 200 SLIGLLSLVGA--------PFFSGFYSK------DKKKIWIDYFNIYYFLGIDGLSLWFI 245
+L+ LSL+GA P GF + +K WID FN+ Y+LGIDG+SLWF+
Sbjct: 31 TLVRWLSLLGAAVSFVVTLPLVCGFDNAFHGMQFVEKTTWIDRFNVNYYLGIDGISLWFV 90
Query: 246 PLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIF 304
PLTAFIT+++++ + I+KK+A+YM AFLILSGL+IG FCALDGMLFY+FFEATL+P+F
Sbjct: 91 PLTAFITVLVVISAWQVIEKKVAQYMGAFLILSGLMIGVFCALDGMLFYVFFEATLVPMF 150
Query: 305 IIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQI 364
II+G WGG+NR YAAIKFFLYTLMGSLLMLI+++YLY S SF IL+WHQL +T QI
Sbjct: 151 IIVGVWGGANRVYAAIKFFLYTLMGSLLMLIALLYLYIQSGGSFEILTWHQLPLTMTAQI 210
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
+F+ F +AFA+K+P+WP+HTWLPDAHVEAPT GSV+LAAIMLKLG YG LRFSLPI PD
Sbjct: 211 LIFLAFLMAFAVKVPMWPVHTWLPDAHVEAPTGGSVVLAAIMLKLGGYGFLRFSLPITPD 270
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
AS+Y + IITLSLI++IYI L+A+VQ D+KKLIAYSSIAHMGFVTLG F+ I +QG
Sbjct: 271 ASHYLAGFIITLSLIAVIYIGLVALVQNDMKKLIAYSSIAHMGFVTLGFFIFNDIGLQGG 330
Query: 485 IIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
I+QMISH +S AMF+ IG LY++M TR I+ +GG++NV+P F+ F++FSLAN LPGT
Sbjct: 331 IVQMISHGFVSGAMFLCIGVLYDRMHTRQIAEYGGVVNVMPRFAALFVLFSLANSGLPGT 390
Query: 545 SGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
SGF+GEFM+IL AVKFNF IG+L +TALI AAYSL L K ++F
Sbjct: 391 SGFVGEFMVILGAVKFNFWIGLLAATALILGAAYSLWLVKRVVF 434
|
Source: Collimonas fungivorans Ter331 Species: Collimonas fungivorans Genus: Collimonas Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|300311107|ref|YP_003775199.1| NADH dehydrogenase I subunit M [Herbaspirillum seropedicae SmR1] gi|300073892|gb|ADJ63291.1| transmembrane NADH dehydrogenase I (chain M) oxidoreductase protein [Herbaspirillum seropedicae SmR1] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1290), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/373 (65%), Positives = 304/373 (81%), Gaps = 1/373 (0%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLI 275
Y +K WID FNI YFLG+DG+SLWF+PLTAFIT+I++L + I+K++A+YM AFLI
Sbjct: 64 YQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGAFLI 123
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
LSG+++G F ALD MLFY FFEATLIP+FII+G WGG NR YAA K FLYTL+GSLLMLI
Sbjct: 124 LSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLLMLI 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
++IYLYY+S SF I +WHQ+ ++ +EQ LF F AFA+K+P+WP+HTWLPDAHV+AP
Sbjct: 184 ALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHVQAP 243
Query: 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
T GS++LAAIMLKLG YG LRFSLPI PDAS+ S +I LSL+++IYI L+A+VQ D+K
Sbjct: 244 TGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQDMK 303
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
KL+AYSSIAHMGFVTLG FM +++QG I+QMISH +S AMF+ IG LY+QM TR IS
Sbjct: 304 KLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTREIS 363
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
+GG++N +P F+ FFI+FSLANC LP TSGF+GEFM+IL AVKFNF IG+L +TALI
Sbjct: 364 QYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILG 423
Query: 576 AAYSLCLSKNIIF 588
AAYSL L+K +IF
Sbjct: 424 AAYSLWLAKRVIF 436
|
Source: Herbaspirillum seropedicae SmR1 Species: Herbaspirillum seropedicae Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|395763166|ref|ZP_10443835.1| NADH dehydrogenase I subunit M [Janthinobacterium lividum PAMC 25724] | Back alignment and taxonomy information |
|---|
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/369 (64%), Positives = 305/369 (82%), Gaps = 2/369 (0%)
Query: 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGL 279
+K WI FNI+Y LGIDGLSLWF+PLTAFIT+I+++ + I+K++A+YM AFLILSGL
Sbjct: 72 EKAPWIATFNIWYSLGIDGLSLWFVPLTAFITVIVVISAWQVIEKRVAQYMGAFLILSGL 131
Query: 280 IIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIY 339
+IG FCALDG+LFY FFEATLIP+FIIIG WGGSNR YA+ KFFLYT GSLL L+++IY
Sbjct: 132 MIGVFCALDGLLFYFFFEATLIPMFIIIGIWGGSNRVYASFKFFLYTFFGSLLTLVAIIY 191
Query: 340 LYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS 399
L +S +F+IL+WH +T EQI++F+ F +AFA+K+P++P+HTWLPD HVEAPT GS
Sbjct: 192 LRNVSG-TFDILAWHAFKLTMHEQIFIFLAFLMAFAVKVPMFPVHTWLPDVHVEAPTGGS 250
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459
+LAAIMLKLG YG LRFSLPI PDAS+Y S +I LSLI++IYI L+A+VQ D+KKL+A
Sbjct: 251 AVLAAIMLKLGAYGFLRFSLPITPDASHYLSGFMIALSLIAVIYIGLVALVQTDMKKLVA 310
Query: 460 YSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGG 519
YSSIAHMGFVTLG FM IS+QG I+QM+SH IS AMF+ IG LY++M TR I+++GG
Sbjct: 311 YSSIAHMGFVTLGFFMFNDISVQGGIVQMVSHGFISGAMFLCIGVLYDRMHTRNIADYGG 370
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
++N +P F+ FF++FS+ANC LP TSGF+GEFM+IL AV+FNF IG+L +TALI+ AAYS
Sbjct: 371 VVNRMPKFAAFFVLFSMANCGLPATSGFVGEFMVILGAVQFNFWIGLLAATALIWGAAYS 430
Query: 580 LCLSKNIIF 588
L ++K ++F
Sbjct: 431 LWMAKRVVF 439
|
Source: Janthinobacterium lividum PAMC 25724 Species: Janthinobacterium lividum Genus: Janthinobacterium Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|415906406|ref|ZP_11552701.1| NADH-quinone oxidoreductase subunit M [Herbaspirillum frisingense GSF30] gi|407763128|gb|EKF71845.1| NADH-quinone oxidoreductase subunit M [Herbaspirillum frisingense GSF30] | Back alignment and taxonomy information |
|---|
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/373 (65%), Positives = 304/373 (81%), Gaps = 1/373 (0%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLI 275
Y +K WID FNI YFLG+DG+SLWF+PLTAFIT+I++L + I+K++A+YM AFLI
Sbjct: 56 YQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGAFLI 115
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
LSG++IG F +LD MLFY FFEATLIP+FII+G WGG NR YAA K FLYTL+GSLLMLI
Sbjct: 116 LSGIMIGVFSSLDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLLMLI 175
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
++IYLYY+S SF I +WHQ+ ++ +EQ LF F AFA+K+P+WP+HTWLPDAHV+AP
Sbjct: 176 ALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHVQAP 235
Query: 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
T GS++LAAIMLKLG YG LRFSLPI PDAS+ S +I LSL+++IYI L+A+VQ D+K
Sbjct: 236 TGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQDMK 295
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
KL+AYSSIAHMGFVTLG FM +++QG I+QMISH +S AMF+ IG LY+QM TR IS
Sbjct: 296 KLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTREIS 355
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
+GG++N +P F+ FFI+FSLANC LP TSGF+GEFM+IL AVKFNF IG+L +TALI
Sbjct: 356 QYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILG 415
Query: 576 AAYSLCLSKNIIF 588
AAYSL L+K +IF
Sbjct: 416 AAYSLWLAKRVIF 428
|
Source: Herbaspirillum frisingense GSF30 Species: Herbaspirillum frisingense Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|329907894|ref|ZP_08274720.1| NADH-ubiquinone oxidoreductase chain M [Oxalobacteraceae bacterium IMCC9480] gi|327546876|gb|EGF31794.1| NADH-ubiquinone oxidoreductase chain M [Oxalobacteraceae bacterium IMCC9480] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1281), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/369 (65%), Positives = 306/369 (82%), Gaps = 1/369 (0%)
Query: 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGL 279
+K WI+ FNI YFLGIDG+SLW + LT+FIT+I+++ + + I+KK+A+YM AFLILSGL
Sbjct: 72 EKMPWIERFNIQYFLGIDGISLWLVVLTSFITIIVVISAWEVIQKKVAQYMGAFLILSGL 131
Query: 280 IIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIY 339
++G FCALDGMLFY+FFEATLIP+FIIIG WGG NR YAAIKFFLYT GSLLML++++Y
Sbjct: 132 MVGVFCALDGMLFYVFFEATLIPMFIIIGVWGGGNRVYAAIKFFLYTFFGSLLMLVALLY 191
Query: 340 LYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS 399
LY+ S SF+I WH L + QI LF+ F +AFA+K+P+WP+HTWLPDAHVEAPT GS
Sbjct: 192 LYFASGGSFDITYWHDLPLPLNVQIPLFLAFLMAFAVKVPMWPVHTWLPDAHVEAPTGGS 251
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459
V+LAAIMLKLG YG LRFSLPI PDAS+Y + ++ITLSLI++IYI L+A+VQ D+KKL+A
Sbjct: 252 VVLAAIMLKLGAYGFLRFSLPITPDASHYLAPMMITLSLIAVIYIGLVALVQTDMKKLVA 311
Query: 460 YSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGG 519
YSSIAHMGFVTLG F +++QG I+QM+SH +S+AMF+ IG LY++M TR I+++GG
Sbjct: 312 YSSIAHMGFVTLGFFAFNDMAVQGGIVQMVSHGFVSAAMFLCIGVLYDRMHTRAIADYGG 371
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
++N +P F+ FF++FSLANC LP TSGF+GEFM+IL A+KFNF IG+L TALIF AAYS
Sbjct: 372 VVNTMPKFAAFFVLFSLANCGLPATSGFVGEFMVILGAIKFNFWIGLLAGTALIFGAAYS 431
Query: 580 LCLSKNIIF 588
L L K +IF
Sbjct: 432 LWLVKRVIF 440
|
Source: Oxalobacteraceae bacterium IMCC9480 Species: Oxalobacteraceae bacterium IMCC9480 Genus: Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|409405602|ref|ZP_11254064.1| transmembrane NADH dehydrogenase I subunit M [Herbaspirillum sp. GW103] gi|386434151|gb|EIJ46976.1| transmembrane NADH dehydrogenase I subunit M [Herbaspirillum sp. GW103] | Back alignment and taxonomy information |
|---|
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/373 (64%), Positives = 304/373 (81%), Gaps = 1/373 (0%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLI 275
Y +K WID F+I YFLG+DG+SLWF+PLTAFIT+I++L + I+K++A+YM AFLI
Sbjct: 64 YQFVEKTPWIDRFSISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGAFLI 123
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
LSG++IG F +LD MLFY FFEATLIP+FII+G WGG NR YAA K FLYTL+GSLLMLI
Sbjct: 124 LSGIMIGVFSSLDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLLMLI 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
++IYLYY+S SF I +WHQ+ ++ +EQ LF F AFA+K+P+WP+HTWLPDAHV+AP
Sbjct: 184 ALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHVQAP 243
Query: 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
T GS++LAAIMLKLG YG LRFSLPI PDAS+ S +I LSL+++IYI L+A+VQ D+K
Sbjct: 244 TGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQDMK 303
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
KL+AYSSIAHMGFVTLG FM +++QG I+QMISH +S AMF+ IG LY+QM TR IS
Sbjct: 304 KLVAYSSIAHMGFVTLGFFMFNDMALQGGIVQMISHGFVSGAMFMCIGVLYDQMHTREIS 363
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
+GG++N +P F+ FFI+FSLANC LP TSGF+GEFM+IL AVKFNF IG+L +TALI
Sbjct: 364 QYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILG 423
Query: 576 AAYSLCLSKNIIF 588
AAYSL L+K +IF
Sbjct: 424 AAYSLWLAKRVIF 436
|
Source: Herbaspirillum sp. GW103 Species: Herbaspirillum sp. GW103 Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|398835062|ref|ZP_10592447.1| proton-translocating NADH-quinone oxidoreductase, chain M [Herbaspirillum sp. YR522] gi|398218564|gb|EJN05068.1| proton-translocating NADH-quinone oxidoreductase, chain M [Herbaspirillum sp. YR522] | Back alignment and taxonomy information |
|---|
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/373 (64%), Positives = 305/373 (81%), Gaps = 1/373 (0%)
Query: 217 YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLI 275
Y +K WID FNI YFLG+DG+SLWF+PLTAFIT+I++L + I+K++A+YM AFLI
Sbjct: 64 YQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGAFLI 123
Query: 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI 335
LSG++IG F +LD MLFY+FFEATLIP+FII+G WGG NR YAA K FLYTL GSLLML+
Sbjct: 124 LSGIMIGVFSSLDAMLFYVFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLAGSLLMLV 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
++IYLY++S +F+I +WH L ++ +EQ LF F AFA+K+P+WP+HTWLPDAHV+AP
Sbjct: 184 ALIYLYFVSGGTFDIPTWHALPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHVQAP 243
Query: 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
T GS++LAAIMLKLG YG LRFSLPI PDAS+ S+ +I LSL+++IYI L+A+VQ D+K
Sbjct: 244 TGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSSFMIFLSLVAVIYIGLVALVQQDMK 303
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
KL+AYSSIAHMGFVTLG FM +++QGAI QMISH +S AMF+ IG LY+QM TR I+
Sbjct: 304 KLVAYSSIAHMGFVTLGFFMFNDMAVQGAIAQMISHGFVSGAMFMCIGVLYDQMHTRDIA 363
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
+GG++N +P F+ FFI+FSLANC LP TSGF+GEFM+IL AVKFNF IG+L +TALI
Sbjct: 364 QYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILG 423
Query: 576 AAYSLCLSKNIIF 588
AAYSL L+K +IF
Sbjct: 424 AAYSLWLAKRVIF 436
|
Source: Herbaspirillum sp. YR522 Species: Herbaspirillum sp. YR522 Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|293603931|ref|ZP_06686346.1| NADH-quinone oxidoreductase subunit M [Achromobacter piechaudii ATCC 43553] gi|292817768|gb|EFF76834.1| NADH-quinone oxidoreductase subunit M [Achromobacter piechaudii ATCC 43553] | Back alignment and taxonomy information |
|---|
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/398 (59%), Positives = 312/398 (78%), Gaps = 15/398 (3%)
Query: 205 LSLVGA--------PFFSGFYSKD------KKKIWIDYFNIYYFLGIDGLSLWFIPLTAF 250
LSLVGA P ++GF + +K WI+ FN+ Y LGIDG+SLWF+ LTAF
Sbjct: 43 LSLVGAFAGFLVTIPLYTGFDNTTAAMQFVEKASWIEAFNVNYHLGIDGISLWFVLLTAF 102
Query: 251 ITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309
IT+I++L + I ++A+YM+AFLILSGL++G F ALDGMLFY+FFEATLIP++IIIG
Sbjct: 103 ITIIVVLAGWEVITSRVAQYMAAFLILSGLMVGVFAALDGMLFYVFFEATLIPMYIIIGV 162
Query: 310 WGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFIT 369
WGG NR YAA KFFLYTLMGSLL LI+ IYL++ S SF+IL+WHQ+ + + QI +F+
Sbjct: 163 WGGPNRVYAAFKFFLYTLMGSLLTLIAFIYLWHASGGSFDILTWHQVKLGQTPQILIFVA 222
Query: 370 FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYF 429
AFA+K+P+WP+HTWLPDAHVEAPT GS++LAAIMLKLG YG LRFSLPI PDAS+
Sbjct: 223 LLAAFAVKVPMWPVHTWLPDAHVEAPTGGSIVLAAIMLKLGAYGFLRFSLPITPDASHSL 282
Query: 430 SNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMI 489
+ L+ITLSLI++IYI L+A++Q D+KKL+AYSS+AHMGFVTLG F+ ++GAI+QMI
Sbjct: 283 AGLMITLSLIAVIYIGLVAIIQEDMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMI 342
Query: 490 SHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIG 549
SH +S AMF+ IG LY++M +R I+++GG++NV+P F+ FFI+FS+AN LP TSGF+G
Sbjct: 343 SHGFVSGAMFMCIGVLYDRMHSRRIADYGGVVNVMPRFATFFILFSMANSGLPATSGFVG 402
Query: 550 EFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNII 587
EFM+I+ AV+ NF IG+L +TALI A+YSL + K ++
Sbjct: 403 EFMVIMGAVEHNFWIGLLAATALILGASYSLWMVKRVV 440
|
Source: Achromobacter piechaudii ATCC 43553 Species: Achromobacter piechaudii Genus: Achromobacter Family: Alcaligenaceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|152980305|ref|YP_001353164.1| NADH dehydrogenase I subunit M [Janthinobacterium sp. Marseille] gi|151280382|gb|ABR88792.1| NADH dehydrogenase I chain M [Janthinobacterium sp. Marseille] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/369 (64%), Positives = 307/369 (83%), Gaps = 1/369 (0%)
Query: 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGL 279
+K WID FNI Y LG+DGLS+WF+ LTAFIT+ +++ + + I+K++A+YM AFLILSGL
Sbjct: 68 EKMKWIDIFNINYSLGVDGLSMWFVILTAFITIFVVIAAWEVIEKRVAQYMGAFLILSGL 127
Query: 280 IIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIY 339
+IG FCALDG+LFY+FFE+TLIP+FIIIG WGG+NR YA+IKFFLYT GSLLML++++Y
Sbjct: 128 MIGVFCALDGLLFYVFFESTLIPMFIIIGVWGGANRVYASIKFFLYTFFGSLLMLVALLY 187
Query: 340 LYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS 399
LY+ S SF+IL+WH L + QI +F+ F +AFA+K+P+WP+HTWLPDAHVEAPT GS
Sbjct: 188 LYFKSGHSFDILAWHTLPLPMDAQILIFLAFLMAFAVKVPMWPVHTWLPDAHVEAPTGGS 247
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459
V+LAAIMLKLG YG LRFSLPI PDAS+Y S +ITLSLI++IYI L+A+VQ D+KKL+A
Sbjct: 248 VVLAAIMLKLGAYGFLRFSLPITPDASHYLSGFMITLSLIAVIYIGLVALVQTDMKKLVA 307
Query: 460 YSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGG 519
YSSIAHMGFVTLG FM +++QG I+QMISH +S AMF+ IG LY++M TR I+++GG
Sbjct: 308 YSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFLCIGVLYDRMHTRNIADYGG 367
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
++NV+P F+ FF++FS+ N LP TSGF+GEFM+IL AVKFNF IG+L +TALI AAYS
Sbjct: 368 VVNVMPKFAAFFVLFSMGNAGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILGAAYS 427
Query: 580 LCLSKNIIF 588
L L+K +IF
Sbjct: 428 LWLAKRVIF 436
|
Source: Janthinobacterium sp. Marseille Species: Janthinobacterium sp. Marseille Genus: Janthinobacterium Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1178 | ||||||
| TIGR_CMR|CBU_1436 | 506 | CBU_1436 "NADH dehydrogenase I | 0.308 | 0.717 | 0.435 | 2.7e-77 | |
| TIGR_CMR|SPO_2764 | 513 | SPO_2764 "NADH dehydrogenase I | 0.334 | 0.768 | 0.396 | 8.5e-77 | |
| TIGR_CMR|GSU_0350 | 522 | GSU_0350 "NADH dehydrogenase I | 0.353 | 0.798 | 0.365 | 2.7e-72 | |
| UNIPROTKB|Q2GGR6 | 483 | nuoM "NADH dehydrogenase I, M | 0.183 | 0.447 | 0.490 | 3.2e-70 | |
| TIGR_CMR|ECH_0555 | 483 | ECH_0555 "NADH dehydrogenase I | 0.183 | 0.447 | 0.490 | 3.2e-70 | |
| UNIPROTKB|Q2F980 | 495 | nad4 "NADH-ubiquinone oxidored | 0.348 | 0.828 | 0.387 | 5.2e-70 | |
| UNIPROTKB|Q8HCP7 | 495 | nad4 "NADH-ubiquinone oxidored | 0.348 | 0.828 | 0.387 | 5.2e-70 | |
| UNIPROTKB|Q8DKX9 | 656 | ndhF1 "NADH dehydrogenase subu | 0.157 | 0.283 | 0.579 | 5.1e-69 | |
| TIGR_CMR|ECH_0554 | 621 | ECH_0554 "NADH dehydrogenase I | 0.148 | 0.281 | 0.619 | 6.4e-67 | |
| DICTYBASE|DDB_G0294026 | 670 | nad5 "NADH dehydrogenase subun | 0.157 | 0.277 | 0.597 | 2e-64 |
| TIGR_CMR|CBU_1436 CBU_1436 "NADH dehydrogenase I, M subunit" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 164/377 (43%), Positives = 217/377 (57%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFXXXXXXXXX-XXXXXXXAEYMSAFLILSGLIIGA 283
WI I Y LG+DG+S+ I LT F Y+SAFL++ G +IG
Sbjct: 72 WISALKINYDLGVDGISMPLIVLTCFTTLLVVLASWTMVKKQVGHYLSAFLVMQGAVIGV 131
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTXXXXXXXXXXXXXXXXX 343
F ALD MLFY F+EA LIP++I IG WG RSYAAIKFFLYT
Sbjct: 132 FSALDAMLFYFFWEAMLIPMYISIGIWGMEKRSYAAIKFFLYTFFGSALLLVALLYLRMH 191
Query: 344 XNKSFNILSWHQLSITKIEQXXXXXXXXXXXXXXXXXXXMHTWLPDAHVEAPTEGSVILA 403
+ SF I +++L ++ Q +HTWLPDAH EAP GSV+LA
Sbjct: 192 SD-SFYIPDYYRLHMSMTVQILVFLGFLFAFAIKVPMWPLHTWLPDAHTEAPVGGSVVLA 250
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFXXXXXXXXXXXXXXXXXXAMVQIDIKKLIAYSSI 463
A+MLKLG YG RFSLPI PDAS A+ Q D+KKLIAYSS+
Sbjct: 251 ALMLKLGGYGFFRFSLPIVPDASRQLDWLMIALSLIAIVYIGFIAIAQTDMKKLIAYSSV 310
Query: 464 AHMGFVTLGIFML------------TKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511
AHMGFVTLG FM+ +S++GA++QMISHA + AMF++ G LY Q+ +
Sbjct: 311 AHMGFVTLGAFMVFFIVAHTGDRADAYLSLEGAMVQMISHAFGAGAMFLAFGVLYEQIHS 370
Query: 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTA 571
R I NFGGI +P+F+ FF++F+++N LPGTSGF+GEFM++LS K +F + L ++
Sbjct: 371 RYIYNFGGIAKTMPYFAAFFMVFAMSNVGLPGTSGFVGEFMVLLSTFKASFWVTFLAAST 430
Query: 572 LIFSAAYSLCLSKNIIF 588
L+ AAY+L + K + +
Sbjct: 431 LVIGAAYTLWMYKRVFY 447
|
|
| TIGR_CMR|SPO_2764 SPO_2764 "NADH dehydrogenase I, M subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 163/411 (39%), Positives = 231/411 (56%)
Query: 196 TCITSLIGLLSLVGA-PFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFXXXX 254
T +T L+ + G P +GF ++ + W+ + Y +G+DG+S+ F+ LT F
Sbjct: 42 TTVTFLVSIGIYTGFDPADTGFQMVEEGE-WL--MGLKYKMGVDGISVLFVLLTTFIMPL 98
Query: 255 XXXXXXXXXXXXAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN 314
EYM AFL+L L++G F ALD +LFY+FFEA LIP+F+IIG WGG
Sbjct: 99 TILASWEVTTRVKEYMIAFLLLETLMLGVFMALDLVLFYLFFEAGLIPMFLIIGIWGGKE 158
Query: 315 RSYAAIKFFLYTXXXXXXXXXXXXXXXXXXNKS-FNILSWHQLSITKIE----------Q 363
R YA+ KFFLYT + +L HQ S Q
Sbjct: 159 RIYASFKFFLYTFLGSVLMLVAMVSMYVDAGTTDIALLMKHQFSSESFSLLGVHVLGGAQ 218
Query: 364 XXXXXXXXXXXXXXXXXXXMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423
+HTWLPDAHV+APT GSV+LAAI+LK+G YG LRFSLP+FP
Sbjct: 219 TLMFLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAILLKMGGYGFLRFSLPMFP 278
Query: 424 DASYYFXXXXXXXXXXXXXXXXXXAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQG 483
+ AMVQ D+KKLIAYSS+AHMGFVT+GIF + + G
Sbjct: 279 VGAEVMTDLILWLSAIAVVYTSLVAMVQEDMKKLIAYSSVAHMGFVTMGIFAANQQGVDG 338
Query: 484 AIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543
AI QM+SH IS+A+F+ +G +Y++M TR I +GG++N +P ++ F++F++AN LPG
Sbjct: 339 AIFQMLSHGFISAALFLCVGVIYDRMHTRDIDAYGGLVNRMPTYARVFMLFTMANVGLPG 398
Query: 544 TSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMI 594
TSGFIGEF+ ++ + N + + ++ +IFSA Y+L L + ++F G +I
Sbjct: 399 TSGFIGEFLTLMGTFQKNTWVAAVAASGVIFSAGYALWLYRRVVF--GDLI 447
|
|
| TIGR_CMR|GSU_0350 GSU_0350 "NADH dehydrogenase I, M subunit" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 2.7e-72, P = 2.7e-72
Identities = 157/430 (36%), Positives = 239/430 (55%)
Query: 201 LIGLLS-LVGAPFFSGFYSK-D----KKKIWIDY--FNIYYFLGIDGLSLWFIPLTAFXX 252
L+ L++ +V P +GF S D +K WI F + Y + IDG+SLW + LT F
Sbjct: 38 LVSLVTFVVSIPLVTGFQSNADFQFVEKMPWIAAGPFQMNYHVAIDGISLWLVLLTTFIM 97
Query: 253 XXXXXXXXXXXXXXA-EYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWG 311
EYM L+L ++GAF +LD LFYIF+E LIP++ IIG WG
Sbjct: 98 PIAILSTWTAVEEKVKEYMICLLLLEVGMLGAFVSLDLFLFYIFWEVMLIPMYFIIGIWG 157
Query: 312 GSNRSYAAIKFFLYTXXXXXXXXXXXXXXXXXXNKS-FNILSWHQLSITKIEQXXXXXXX 370
G N+ YAA+KFF+YT FN+L ++++++ Q
Sbjct: 158 GKNKIYAAVKFFIYTMVGSMLMLVALVTLYFKAGAGDFNVLRFYEVTLDPATQVWMFLAF 217
Query: 371 XXXXXXXXXXXXMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFX 430
+HTWLPDAH EAPT GSVILAA++LK+G YG +RF++P+FPDA+ F
Sbjct: 218 ALAFAIKVPMFPLHTWLPDAHTEAPTAGSVILAAVLLKMGTYGFVRFAMPLFPDATDKFT 277
Query: 431 XXXXXXXXXXXXXXXXXAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMIS 490
AMVQ D+KKL+AYSS+AH+G+V LG+F L + G ++QM++
Sbjct: 278 PLIATLSVIGIIYAALVAMVQEDVKKLVAYSSVAHLGYVMLGVFALNLQGLSGGMLQMLN 337
Query: 491 HALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGE 550
H + + A+F+ +GF+Y + TRLI++FGG+ +P F+ F+I +L++ LPGT+GF+GE
Sbjct: 338 HGVSTGALFLIVGFIYERRHTRLITDFGGLAKQMPVFATIFMIVTLSSIGLPGTNGFVGE 397
Query: 551 FMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLE 609
F+++L A + V+ ++ +I +A Y L + + ++F G++ L +
Sbjct: 398 FLVLLGAFESELRWYAVIGTSGVILAAVYMLWMFQRVMF--GELTNPKNQTLCDLNAREV 455
Query: 610 LMSLTLCVLI 619
+ L L VLI
Sbjct: 456 GIMLPLLVLI 465
|
|
| UNIPROTKB|Q2GGR6 nuoM "NADH dehydrogenase I, M subunit" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 3.2e-70, Sum P(3) = 3.2e-70
Identities = 106/216 (49%), Positives = 139/216 (64%)
Query: 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFXXXXXXXXXXXXXX 443
HTWLPDAHV+APT GSV+LA I++K+G Y LLRFSLP+ P+AS YF
Sbjct: 223 HTWLPDAHVQAPTVGSVLLAGILIKVGTYALLRFSLPMLPEASMYFSNFVMILSIIGVIY 282
Query: 444 XXXXAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG 503
+ VQ +IKKLIAYSSIAHMGFVT GIF + I GA+ QMISH L+S+A+FI +G
Sbjct: 283 ASLISFVQTNIKKLIAYSSIAHMGFVTAGIFSFNEYGISGAVFQMISHGLVSAALFICVG 342
Query: 504 FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC 563
LYN+ T I + G+ +P FS+ FI FS+A+ +LPGTSGFIGEF+ IL ++
Sbjct: 343 ILYNRTHTLEIVRYSGLAKTMPKFSIMFIFFSMASIALPGTSGFIGEFLSILGIFHYSKL 402
Query: 564 IGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGN 599
+ + +I A Y L L K II+ + +I+ N
Sbjct: 403 FSIFITIGVILGALYMLFLCKRIIWSVQNCDLINCN 438
|
|
| TIGR_CMR|ECH_0555 ECH_0555 "NADH dehydrogenase I, M subunit" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 3.2e-70, Sum P(3) = 3.2e-70
Identities = 106/216 (49%), Positives = 139/216 (64%)
Query: 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFXXXXXXXXXXXXXX 443
HTWLPDAHV+APT GSV+LA I++K+G Y LLRFSLP+ P+AS YF
Sbjct: 223 HTWLPDAHVQAPTVGSVLLAGILIKVGTYALLRFSLPMLPEASMYFSNFVMILSIIGVIY 282
Query: 444 XXXXAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG 503
+ VQ +IKKLIAYSSIAHMGFVT GIF + I GA+ QMISH L+S+A+FI +G
Sbjct: 283 ASLISFVQTNIKKLIAYSSIAHMGFVTAGIFSFNEYGISGAVFQMISHGLVSAALFICVG 342
Query: 504 FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC 563
LYN+ T I + G+ +P FS+ FI FS+A+ +LPGTSGFIGEF+ IL ++
Sbjct: 343 ILYNRTHTLEIVRYSGLAKTMPKFSIMFIFFSMASIALPGTSGFIGEFLSILGIFHYSKL 402
Query: 564 IGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGN 599
+ + +I A Y L L K II+ + +I+ N
Sbjct: 403 FSIFITIGVILGALYMLFLCKRIIWSVQNCDLINCN 438
|
|
| UNIPROTKB|Q2F980 nad4 "NADH-ubiquinone oxidoreductase chain 4" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
|---|
Score = 713 (256.0 bits), Expect = 5.2e-70, P = 5.2e-70
Identities = 164/423 (38%), Positives = 231/423 (54%)
Query: 171 GSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDK--KKI-WID 227
GSI + N IR L + + + C++ + L LV F +K + + + W+
Sbjct: 22 GSITLLFIPNSSIR----LIRLIGL-CVSLITFLYPLVPRIQFDPSTAKSQFVESLRWLP 76
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFXXXXXXXXXXXXXXXXA-EYMSAFLILSGLIIGAFCA 286
Y NI+ ++GIDGLSL+F+ LT F EY++AFLI L+I C
Sbjct: 77 YENIHLYMGIDGLSLFFVILTTFLIPICISVGWSGMRSFGKEYITAFLIREFLMIAVSCM 136
Query: 287 LDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTXXXXXXXXXXXXXXXXXXN 345
LD +LFY+ E+ IP+FIIIG WG R AA +FFLYT
Sbjct: 137 LDPLLFYVLSESVPIPMFIIIGVWGSRQRKIKAAYQFFLYTLLGSVFMLLAILLILLQTG 196
Query: 346 KS-FNILSWHQLSITKIEQXXXXXXXXXXXXXXXXXXXMHTWLPDAHVEAPTEGSVILAA 404
+ IL + S + Q +H WLP+AHVEAPT GSVILA
Sbjct: 197 TTDLQILLTTEFSERR--QILLWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAG 254
Query: 405 IMLKLGCYGLLRFSLPIFPDASYYFXXXXXXXXXXXXXXXXXXAMVQIDIKKLIAYSSIA 464
I+LKLG YG LRFS+P+FP+A+ F + QID+KK+IAYSS+A
Sbjct: 255 ILLKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYSSVA 314
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
HM VT+G+F I G+I+ M+SH L+SSA+F+ +G LY++ KTRL+ +GG+++ +
Sbjct: 315 HMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLVSTM 374
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSK 584
P+FS F F+LAN SLPGTS FIGEF+I++ A + N + L + +I AAYSL L
Sbjct: 375 PNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYN 434
Query: 585 NII 587
++
Sbjct: 435 RVV 437
|
|
| UNIPROTKB|Q8HCP7 nad4 "NADH-ubiquinone oxidoreductase chain 4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 713 (256.0 bits), Expect = 5.2e-70, P = 5.2e-70
Identities = 164/423 (38%), Positives = 231/423 (54%)
Query: 171 GSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDK--KKI-WID 227
GSI + N IR L + + + C++ + L LV F +K + + + W+
Sbjct: 22 GSITLLFIPNSSIR----LIRLIGL-CVSLITFLYPLVPRIQFDPSTAKSQFVESLRWLP 76
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFXXXXXXXXXXXXXXXXA-EYMSAFLILSGLIIGAFCA 286
Y NI+ ++GIDGLSL+F+ LT F EY++AFLI L+I C
Sbjct: 77 YENIHLYMGIDGLSLFFVILTTFLIPICISVGWSGMRSFGKEYITAFLIREFLMIAVSCM 136
Query: 287 LDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTXXXXXXXXXXXXXXXXXXN 345
LD +LFY+ E+ IP+FIIIG WG R AA +FFLYT
Sbjct: 137 LDPLLFYVLSESVPIPMFIIIGVWGSRQRKIKAAYQFFLYTLLGSVFMLLAILLILLQTG 196
Query: 346 KS-FNILSWHQLSITKIEQXXXXXXXXXXXXXXXXXXXMHTWLPDAHVEAPTEGSVILAA 404
+ IL + S + Q +H WLP+AHVEAPT GSVILA
Sbjct: 197 TTDLQILLTTEFSERR--QILLWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAG 254
Query: 405 IMLKLGCYGLLRFSLPIFPDASYYFXXXXXXXXXXXXXXXXXXAMVQIDIKKLIAYSSIA 464
I+LKLG YG LRFS+P+FP+A+ F + QID+KK+IAYSS+A
Sbjct: 255 ILLKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYSSVA 314
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
HM VT+G+F I G+I+ M+SH L+SSA+F+ +G LY++ KTRL+ +GG+++ +
Sbjct: 315 HMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLVSTM 374
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSK 584
P+FS F F+LAN SLPGTS FIGEF+I++ A + N + L + +I AAYSL L
Sbjct: 375 PNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYN 434
Query: 585 NII 587
++
Sbjct: 435 RVV 437
|
|
| UNIPROTKB|Q8DKX9 ndhF1 "NADH dehydrogenase subunit 5" [Thermosynechococcus elongatus BP-1 (taxid:197221)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 5.1e-69, Sum P(3) = 5.1e-69
Identities = 113/195 (57%), Positives = 145/195 (74%)
Query: 35 ANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLF 94
A + A L+ +G +AKSAQFPLH WLPD+MEGPTP SALIHAATMV AG+F+I RM P+F
Sbjct: 226 AAILAILVF-LGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLIARMFPVF 284
Query: 95 ELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIF 154
E ++ I + GA TAF + I QNDIK+ +AYST+SQLGYM +G+GV AY+ +F
Sbjct: 285 EQLPQVMTTIAWTGAFTAFMGATIAITQNDIKKSLAYSTISQLGYMVMGMGVGAYSAGLF 344
Query: 155 HLMTHAFFKALLFLSAGSIIINMK----HN----QDIRNMGGLYKYMPITCITSLIGLLS 206
HLMTHA+FKA+LFL +GS+I +M+ HN QD+R MGGL KYMPIT T L+G L+
Sbjct: 345 HLMTHAYFKAMLFLGSGSVIHSMEGVVGHNPDLAQDMRYMGGLRKYMPITGATFLVGCLA 404
Query: 207 LVGAPFFSGFYSKDK 221
+ G P F+GF+SKD+
Sbjct: 405 ISGVPPFAGFWSKDE 419
|
|
| TIGR_CMR|ECH_0554 ECH_0554 "NADH dehydrogenase I, L subunit" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 560 (202.2 bits), Expect = 6.4e-67, Sum P(2) = 6.4e-67
Identities = 109/176 (61%), Positives = 135/176 (76%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
IG M KSAQ LHTWLPD+MEGPTPASALIHAATMVTAG+F++ R SPLFELS A ++I
Sbjct: 226 IGCMGKSAQIGLHTWLPDAMEGPTPASALIHAATMVTAGVFLVARCSPLFELSVMARNVI 285
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKA 164
L +GA T F + I+Q+D+K+IIAYST SQLGYM + G+SAY+V+IFHLMTHAFFKA
Sbjct: 286 LIVGAFTCLFAATVAIVQSDVKKIIAYSTCSQLGYMFIACGLSAYSVAIFHLMTHAFFKA 345
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
LLFL AG+II + H QDI + ++ +P T + + IG L+L G F+GFYSKD
Sbjct: 346 LLFLCAGNII-HATHEQDIHKVNASWRQIPFTYVLTWIGSLALAGIFPFAGFYSKD 400
|
|
| DICTYBASE|DDB_G0294026 nad5 "NADH dehydrogenase subunit 5" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 567 (204.7 bits), Expect = 2.0e-64, Sum P(2) = 2.0e-64
Identities = 113/189 (59%), Positives = 137/189 (72%)
Query: 32 AITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS 91
AIT + +F++ IG + KSAQ LH WLPD+MEGPTP SAL+HAATMVTAG+F++ R S
Sbjct: 218 AITL-IGSFIV--IGVVGKSAQLGLHMWLPDAMEGPTPVSALLHAATMVTAGVFLVLRTS 274
Query: 92 PLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTV 151
PL S T L+I+ IGA+T F +GI+QNDIKR+IAYST SQLGYM G+ Y
Sbjct: 275 PLLSYSITILNILTIIGALTTLFATTIGIVQNDIKRVIAYSTCSQLGYMIFACGLLNYNA 334
Query: 152 SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAP 211
SI+HL THAFFKALLFLSAGS+I + QD+R MGGL MP+T LIG L+L G P
Sbjct: 335 SIYHLTTHAFFKALLFLSAGSVIHGLNDEQDMRKMGGLVNLMPLTYQCMLIGTLALTGFP 394
Query: 212 FFSGFYSKD 220
F SG+YSKD
Sbjct: 395 FLSGYYSKD 403
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.6.99 | LOW CONFIDENCE prediction! |
| 4th Layer | 1.6.99.5 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.25 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.6.5 | 0.691 |
| 3rd Layer | 1.6.5.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1178 | |||
| PRK05846 | 497 | PRK05846, PRK05846, NADH:ubiquinone oxidoreductase | 1e-170 | |
| COG1008 | 497 | COG1008, NuoM, NADH:ubiquinone oxidoreductase subu | 1e-147 | |
| TIGR01972 | 481 | TIGR01972, NDH_I_M, proton-translocating NADH-quin | 1e-145 | |
| PRK06590 | 624 | PRK06590, PRK06590, NADH:ubiquinone oxidoreductase | 1e-123 | |
| TIGR01974 | 609 | TIGR01974, NDH_I_L, proton-translocating NADH-quin | 1e-106 | |
| PRK05777 | 476 | PRK05777, PRK05777, NADH:ubiquinone oxidoreductase | 1e-103 | |
| MTH00204 | 485 | MTH00204, ND4, NADH dehydrogenase subunit 4; Provi | 5e-99 | |
| MTH00217 | 482 | MTH00217, ND4, NADH dehydrogenase subunit 4; Provi | 2e-97 | |
| COG1009 | 606 | COG1009, NuoL, NADH:ubiquinone oxidoreductase subu | 3e-89 | |
| PRK07376 | 673 | PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase | 3e-86 | |
| cd01639 | 244 | cd01639, IMPase, IMPase, inositol monophosphatase | 2e-84 | |
| PRK12561 | 504 | PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase | 1e-83 | |
| COG1007 | 475 | COG1007, NuoN, NADH:ubiquinone oxidoreductase subu | 2e-83 | |
| PRK06473 | 500 | PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase | 5e-80 | |
| MTH00210 | 616 | MTH00210, ND5, NADH dehydrogenase subunit 5; Provi | 2e-79 | |
| MTH00020 | 610 | MTH00020, ND5, NADH dehydrogenase subunit 5; Revie | 3e-78 | |
| TIGR01770 | 468 | TIGR01770, NDH_I_N, proton-translocating NADH-quin | 5e-78 | |
| MTH00004 | 602 | MTH00004, ND5, NADH dehydrogenase subunit 5; Valid | 2e-76 | |
| CHL00025 | 741 | CHL00025, ndhF, NADH dehydrogenase subunit 5 | 1e-74 | |
| MTH00108 | 602 | MTH00108, ND5, NADH dehydrogenase subunit 5; Provi | 3e-73 | |
| MTH00137 | 611 | MTH00137, ND5, NADH dehydrogenase subunit 5; Provi | 4e-73 | |
| MTH00163 | 445 | MTH00163, ND4, NADH dehydrogenase subunit 4; Provi | 4e-73 | |
| MTH00226 | 505 | MTH00226, ND4, NADH dehydrogenase subunit 4; Provi | 6e-73 | |
| CHL00011 | 498 | CHL00011, ndhD, NADH dehydrogenase subunit 4 | 7e-73 | |
| PRK02546 | 525 | PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase | 3e-71 | |
| MTH00066 | 598 | MTH00066, ND5, NADH dehydrogenase subunit 5; Provi | 3e-71 | |
| MTH00150 | 417 | MTH00150, ND4, NADH dehydrogenase subunit 4; Provi | 3e-70 | |
| MTH00211 | 597 | MTH00211, ND5, NADH dehydrogenase subunit 5; Provi | 1e-67 | |
| PRK07363 | 501 | PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase | 2e-64 | |
| PRK10757 | 267 | PRK10757, PRK10757, inositol monophosphatase; Prov | 7e-64 | |
| MTH00208 | 628 | MTH00208, ND5, NADH dehydrogenase subunit 5; Provi | 8e-64 | |
| COG0483 | 260 | COG0483, SuhB, Archaeal fructose-1,6-bisphosphatas | 2e-63 | |
| MTH00206 | 450 | MTH00206, ND4, NADH dehydrogenase subunit 4; Provi | 2e-63 | |
| MTH00205 | 448 | MTH00205, ND4, NADH dehydrogenase subunit 4; Provi | 4e-60 | |
| MTH00068 | 458 | MTH00068, ND4, NADH dehydrogenase subunit 4; Provi | 2e-59 | |
| MTH00044 | 458 | MTH00044, ND4, NADH dehydrogenase subunit 4; Valid | 4e-59 | |
| MTH00124 | 457 | MTH00124, ND4, NADH dehydrogenase subunit 4; Provi | 8e-59 | |
| pfam00361 | 270 | pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquin | 1e-58 | |
| MTH00014 | 452 | MTH00014, ND4, NADH dehydrogenase subunit 4; Valid | 4e-56 | |
| MTH00110 | 459 | MTH00110, ND4, NADH dehydrogenase subunit 4; Provi | 5e-55 | |
| MTH00032 | 669 | MTH00032, ND5, NADH dehydrogenase subunit 5; Provi | 5e-54 | |
| MTH00196 | 365 | MTH00196, ND2, NADH dehydrogenase subunit 2; Provi | 1e-53 | |
| MTH00151 | 565 | MTH00151, ND5, NADH dehydrogenase subunit 5; Provi | 3e-53 | |
| MTH00165 | 573 | MTH00165, ND5, NADH dehydrogenase subunit 5; Provi | 3e-53 | |
| MTH00127 | 459 | MTH00127, ND4, NADH dehydrogenase subunit 4; Provi | 6e-52 | |
| CHL00049 | 494 | CHL00049, ndhB, NADH dehydrogenase subunit 2 | 2e-51 | |
| pfam00361 | 270 | pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquin | 3e-49 | |
| PRK02504 | 513 | PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase | 1e-48 | |
| MTH00199 | 460 | MTH00199, ND2, NADH dehydrogenase subunit 2; Provi | 1e-47 | |
| pfam00459 | 269 | pfam00459, Inositol_P, Inositol monophosphatase fa | 1e-47 | |
| cd01637 | 238 | cd01637, IMPase_like, Inositol-monophosphatase-lik | 7e-47 | |
| PRK12648 | 948 | PRK12648, PRK12648, putative monovalent cation/H+ | 8e-47 | |
| MTH00209 | 564 | MTH00209, ND5, NADH dehydrogenase subunit 5; Provi | 3e-46 | |
| MTH00207 | 572 | MTH00207, ND5, NADH dehydrogenase subunit 5; Provi | 8e-46 | |
| pfam00361 | 270 | pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquin | 9e-46 | |
| COG0651 | 504 | COG0651, HyfB, Formate hydrogenlyase subunit 3/Mul | 1e-45 | |
| PRK12645 | 800 | PRK12645, PRK12645, monovalent cation/H+ antiporte | 1e-45 | |
| PLN02553 | 270 | PLN02553, PLN02553, inositol-phosphate phosphatase | 1e-44 | |
| PRK12647 | 761 | PRK12647, PRK12647, putative monovalent cation/H+ | 1e-44 | |
| PRK12649 | 789 | PRK12649, PRK12649, putative monovalent cation/H+ | 4e-44 | |
| PRK08375 | 487 | PRK08375, PRK08375, putative monovalent cation/H+ | 4e-43 | |
| PRK07390 | 613 | PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase | 5e-43 | |
| TIGR00940 | 793 | TIGR00940, 2a6301s01, Tmonovalent cation:proton an | 4e-42 | |
| PRK06525 | 479 | PRK06525, PRK06525, hydrogenase 4 subunit D; Valid | 5e-42 | |
| TIGR01960 | 606 | TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subun | 4e-41 | |
| PRK12644 | 965 | PRK12644, PRK12644, putative monovalent cation/H+ | 6e-41 | |
| MTH00094 | 403 | MTH00094, ND4, NADH dehydrogenase subunit 4; Provi | 4e-40 | |
| PRK08375 | 487 | PRK08375, PRK08375, putative monovalent cation/H+ | 2e-39 | |
| PRK12646 | 800 | PRK12646, PRK12646, putative monovalent cation/H+ | 3e-39 | |
| PRK08668 | 610 | PRK08668, PRK08668, NADH dehydrogenase subunit M; | 3e-39 | |
| PRK12650 | 962 | PRK12650, PRK12650, putative monovalent cation/H+ | 1e-38 | |
| PRK12667 | 520 | PRK12667, PRK12667, putative monovalent cation/H+ | 1e-38 | |
| MTH00198 | 607 | MTH00198, ND2, NADH dehydrogenase subunit 2; Provi | 8e-38 | |
| COG0651 | 504 | COG0651, HyfB, Formate hydrogenlyase subunit 3/Mul | 3e-35 | |
| PRK08375 | 487 | PRK08375, PRK08375, putative monovalent cation/H+ | 1e-34 | |
| COG1009 | 606 | COG1009, NuoL, NADH:ubiquinone oxidoreductase subu | 3e-34 | |
| PRK08667 | 644 | PRK08667, PRK08667, hydrogenase membrane subunit; | 9e-33 | |
| PRK12676 | 263 | PRK12676, PRK12676, bifunctional inositol-1 monoph | 1e-31 | |
| MTH00095 | 527 | MTH00095, ND5, NADH dehydrogenase subunit 5; Provi | 2e-31 | |
| PRK12667 | 520 | PRK12667, PRK12667, putative monovalent cation/H+ | 3e-31 | |
| PRK08377 | 494 | PRK08377, PRK08377, NADH dehydrogenase subunit N; | 4e-31 | |
| PRK06458 | 490 | PRK06458, PRK06458, hydrogenase 4 subunit F; Valid | 2e-30 | |
| TIGR00944 | 463 | TIGR00944, 2a6301s04, Multicomponent K+:H+antiport | 2e-30 | |
| PLN02737 | 363 | PLN02737, PLN02737, inositol monophosphatase famil | 4e-30 | |
| PRK06521 | 667 | PRK06521, PRK06521, hydrogenase 4 subunit B; Valid | 6e-30 | |
| COG0651 | 504 | COG0651, HyfB, Formate hydrogenlyase subunit 3/Mul | 8e-30 | |
| PRK12668 | 581 | PRK12668, PRK12668, putative monovalent cation/H+ | 2e-29 | |
| PRK08376 | 521 | PRK08376, PRK08376, putative monovalent cation/H+ | 2e-29 | |
| PRK12663 | 497 | PRK12663, PRK12663, putative monovalent cation/H+ | 3e-29 | |
| cd01643 | 242 | cd01643, Bacterial_IMPase_like_2, Bacterial family | 3e-29 | |
| PRK08676 | 485 | PRK08676, PRK08676, hydrogenase membrane subunit; | 8e-29 | |
| PRK12665 | 521 | PRK12665, PRK12665, putative monovalent cation/H+ | 2e-28 | |
| PRK12662 | 492 | PRK12662, PRK12662, putative monovalent cation/H+ | 3e-28 | |
| MTH00200 | 347 | MTH00200, ND2, NADH dehydrogenase subunit 2; Provi | 6e-28 | |
| PRK07691 | 496 | PRK07691, PRK07691, putative monovalent cation/H+ | 6e-28 | |
| COG1007 | 475 | COG1007, NuoN, NADH:ubiquinone oxidoreductase subu | 9e-28 | |
| MTH00112 | 346 | MTH00112, ND2, NADH dehydrogenase subunit 2; Provi | 2e-27 | |
| PRK08376 | 521 | PRK08376, PRK08376, putative monovalent cation/H+ | 4e-27 | |
| MTH00144 | 328 | MTH00144, ND2, NADH dehydrogenase subunit 2; Provi | 6e-27 | |
| PRK08377 | 494 | PRK08377, PRK08377, NADH dehydrogenase subunit N; | 1e-26 | |
| MTH00105 | 347 | MTH00105, ND2, NADH dehydrogenase subunit 2; Provi | 3e-26 | |
| PRK05777 | 476 | PRK05777, PRK05777, NADH:ubiquinone oxidoreductase | 5e-26 | |
| MTH00041 | 349 | MTH00041, ND2, NADH dehydrogenase subunit 2; Valid | 5e-26 | |
| PRK08376 | 521 | PRK08376, PRK08376, putative monovalent cation/H+ | 7e-26 | |
| cd01515 | 257 | cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisp | 2e-25 | |
| PRK08168 | 516 | PRK08168, PRK08168, NADH dehydrogenase subunit L; | 3e-25 | |
| PRK06525 | 479 | PRK06525, PRK06525, hydrogenase 4 subunit D; Valid | 4e-25 | |
| PRK08668 | 610 | PRK08668, PRK08668, NADH dehydrogenase subunit M; | 4e-25 | |
| PRK08377 | 494 | PRK08377, PRK08377, NADH dehydrogenase subunit N; | 4e-25 | |
| PRK06521 | 667 | PRK06521, PRK06521, hydrogenase 4 subunit B; Valid | 7e-25 | |
| TIGR00940 | 793 | TIGR00940, 2a6301s01, Tmonovalent cation:proton an | 1e-24 | |
| PRK12662 | 492 | PRK12662, PRK12662, putative monovalent cation/H+ | 1e-24 | |
| MTH00070 | 346 | MTH00070, ND2, NADH dehydrogenase subunit 2; Provi | 1e-24 | |
| MTH00160 | 335 | MTH00160, ND2, NADH dehydrogenase subunit 2; Provi | 2e-24 | |
| PRK06589 | 489 | PRK06589, PRK06589, putative monovalent cation/H+ | 3e-24 | |
| PRK06589 | 489 | PRK06589, PRK06589, putative monovalent cation/H+ | 6e-24 | |
| PRK07234 | 470 | PRK07234, PRK07234, putative monovalent cation/H+ | 1e-23 | |
| PRK08668 | 610 | PRK08668, PRK08668, NADH dehydrogenase subunit M; | 2e-23 | |
| MTH00011 | 330 | MTH00011, ND2, NADH dehydrogenase subunit 2; Valid | 2e-23 | |
| PRK07234 | 470 | PRK07234, PRK07234, putative monovalent cation/H+ | 4e-23 | |
| PRK12646 | 800 | PRK12646, PRK12646, putative monovalent cation/H+ | 9e-23 | |
| PRK05846 | 497 | PRK05846, PRK05846, NADH:ubiquinone oxidoreductase | 1e-22 | |
| TIGR01972 | 481 | TIGR01972, NDH_I_M, proton-translocating NADH-quin | 2e-22 | |
| MTH00062 | 417 | MTH00062, ND4, NADH dehydrogenase subunit 4; Provi | 2e-22 | |
| TIGR01770 | 468 | TIGR01770, NDH_I_N, proton-translocating NADH-quin | 3e-22 | |
| PRK08601 | 509 | PRK08601, PRK08601, NADH dehydrogenase subunit 5; | 3e-22 | |
| COG1008 | 497 | COG1008, NuoM, NADH:ubiquinone oxidoreductase subu | 5e-22 | |
| PRK12650 | 962 | PRK12650, PRK12650, putative monovalent cation/H+ | 8e-22 | |
| PRK12667 | 520 | PRK12667, PRK12667, putative monovalent cation/H+ | 1e-21 | |
| cd01638 | 242 | cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phos | 2e-21 | |
| COG1009 | 606 | COG1009, NuoL, NADH:ubiquinone oxidoreductase subu | 3e-21 | |
| PRK12649 | 789 | PRK12649, PRK12649, putative monovalent cation/H+ | 5e-21 | |
| PRK06458 | 490 | PRK06458, PRK06458, hydrogenase 4 subunit F; Valid | 1e-20 | |
| PRK12668 | 581 | PRK12668, PRK12668, putative monovalent cation/H+ | 2e-20 | |
| PRK07691 | 496 | PRK07691, PRK07691, putative monovalent cation/H+ | 2e-20 | |
| TIGR01972 | 481 | TIGR01972, NDH_I_M, proton-translocating NADH-quin | 6e-20 | |
| PRK07691 | 496 | PRK07691, PRK07691, putative monovalent cation/H+ | 2e-19 | |
| TIGR02067 | 251 | TIGR02067, his_9_HisN, histidinol-phosphatase, ino | 3e-19 | |
| COG1008 | 497 | COG1008, NuoM, NADH:ubiquinone oxidoreductase subu | 4e-19 | |
| PRK12645 | 800 | PRK12645, PRK12645, monovalent cation/H+ antiporte | 4e-19 | |
| PRK08042 | 593 | PRK08042, PRK08042, formate hydrogenlyase subunit | 4e-19 | |
| PRK12665 | 521 | PRK12665, PRK12665, putative monovalent cation/H+ | 6e-19 | |
| PRK12647 | 761 | PRK12647, PRK12647, putative monovalent cation/H+ | 1e-18 | |
| PRK08667 | 644 | PRK08667, PRK08667, hydrogenase membrane subunit; | 1e-18 | |
| PRK06277 | 478 | PRK06277, PRK06277, hydrogenase subunit F; Validat | 1e-18 | |
| PRK05777 | 476 | PRK05777, PRK05777, NADH:ubiquinone oxidoreductase | 2e-18 | |
| TIGR00944 | 463 | TIGR00944, 2a6301s04, Multicomponent K+:H+antiport | 2e-18 | |
| PRK08667 | 644 | PRK08667, PRK08667, hydrogenase membrane subunit; | 4e-18 | |
| PRK08676 | 485 | PRK08676, PRK08676, hydrogenase membrane subunit; | 6e-18 | |
| MTH00197 | 323 | MTH00197, ND2, NADH dehydrogenase subunit 2; Provi | 7e-18 | |
| TIGR01974 | 609 | TIGR01974, NDH_I_L, proton-translocating NADH-quin | 3e-17 | |
| PRK12663 | 497 | PRK12663, PRK12663, putative monovalent cation/H+ | 3e-17 | |
| cd01641 | 248 | cd01641, Bacterial_IMPase_like_1, Predominantly ba | 3e-17 | |
| PRK08676 | 485 | PRK08676, PRK08676, hydrogenase membrane subunit; | 4e-17 | |
| PRK05846 | 497 | PRK05846, PRK05846, NADH:ubiquinone oxidoreductase | 6e-17 | |
| PRK12663 | 497 | PRK12663, PRK12663, putative monovalent cation/H+ | 6e-17 | |
| COG1007 | 475 | COG1007, NuoN, NADH:ubiquinone oxidoreductase subu | 2e-16 | |
| PRK08042 | 593 | PRK08042, PRK08042, formate hydrogenlyase subunit | 2e-16 | |
| MTH00135 | 347 | MTH00135, ND2, NADH dehydrogenase subunit 2; Provi | 2e-16 | |
| PRK12644 | 965 | PRK12644, PRK12644, putative monovalent cation/H+ | 9e-16 | |
| PRK06277 | 478 | PRK06277, PRK06277, hydrogenase subunit F; Validat | 9e-16 | |
| MTH00196 | 365 | MTH00196, ND2, NADH dehydrogenase subunit 2; Provi | 4e-15 | |
| MTH00063 | 522 | MTH00063, ND5, NADH dehydrogenase subunit 5; Provi | 4e-15 | |
| TIGR00944 | 463 | TIGR00944, 2a6301s04, Multicomponent K+:H+antiport | 6e-15 | |
| PRK07234 | 470 | PRK07234, PRK07234, putative monovalent cation/H+ | 7e-15 | |
| COG1218 | 276 | COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfa | 8e-15 | |
| PRK06458 | 490 | PRK06458, PRK06458, hydrogenase 4 subunit F; Valid | 3e-14 | |
| PRK07363 | 501 | PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase | 4e-14 | |
| PRK14076 | 569 | PRK14076, pnk, inorganic polyphosphate/ATP-NAD kin | 6e-14 | |
| PRK06473 | 500 | PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase | 1e-13 | |
| TIGR00940 | 793 | TIGR00940, 2a6301s01, Tmonovalent cation:proton an | 1e-13 | |
| PRK06459 | 585 | PRK06459, PRK06459, hydrogenase 4 subunit B; Valid | 1e-13 | |
| PRK06521 | 667 | PRK06521, PRK06521, hydrogenase 4 subunit B; Valid | 2e-13 | |
| PRK06277 | 478 | PRK06277, PRK06277, hydrogenase subunit F; Validat | 3e-13 | |
| PRK12648 | 948 | PRK12648, PRK12648, putative monovalent cation/H+ | 7e-13 | |
| TIGR01974 | 609 | TIGR01974, NDH_I_L, proton-translocating NADH-quin | 1e-12 | |
| MTH00032 | 669 | MTH00032, ND5, NADH dehydrogenase subunit 5; Provi | 1e-12 | |
| MTH00199 | 460 | MTH00199, ND2, NADH dehydrogenase subunit 2; Provi | 1e-12 | |
| PRK06525 | 479 | PRK06525, PRK06525, hydrogenase 4 subunit D; Valid | 1e-12 | |
| PRK12646 | 800 | PRK12646, PRK12646, putative monovalent cation/H+ | 1e-12 | |
| MTH00020 | 610 | MTH00020, ND5, NADH dehydrogenase subunit 5; Revie | 2e-12 | |
| PRK12662 | 492 | PRK12662, PRK12662, putative monovalent cation/H+ | 2e-12 | |
| MTH00020 | 610 | MTH00020, ND5, NADH dehydrogenase subunit 5; Revie | 3e-12 | |
| MTH00032 | 669 | MTH00032, ND5, NADH dehydrogenase subunit 5; Provi | 3e-12 | |
| PRK06589 | 489 | PRK06589, PRK06589, putative monovalent cation/H+ | 3e-12 | |
| PRK12666 | 528 | PRK12666, PRK12666, putative monovalent cation/H+ | 4e-12 | |
| cd01517 | 274 | cd01517, PAP_phosphatase, PAP-phosphatase_like dom | 6e-12 | |
| PRK12561 | 504 | PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase | 7e-12 | |
| PRK06590 | 624 | PRK06590, PRK06590, NADH:ubiquinone oxidoreductase | 8e-12 | |
| TIGR01770 | 468 | TIGR01770, NDH_I_N, proton-translocating NADH-quin | 8e-12 | |
| CHL00049 | 494 | CHL00049, ndhB, NADH dehydrogenase subunit 2 | 8e-12 | |
| PRK12665 | 521 | PRK12665, PRK12665, putative monovalent cation/H+ | 2e-11 | |
| cd01636 | 184 | cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain | 3e-11 | |
| MTH00011 | 330 | MTH00011, ND2, NADH dehydrogenase subunit 2; Valid | 7e-11 | |
| MTH00211 | 597 | MTH00211, ND5, NADH dehydrogenase subunit 5; Provi | 8e-11 | |
| PRK06459 | 585 | PRK06459, PRK06459, hydrogenase 4 subunit B; Valid | 1e-10 | |
| MTH00204 | 485 | MTH00204, ND4, NADH dehydrogenase subunit 4; Provi | 2e-10 | |
| MTH00200 | 347 | MTH00200, ND2, NADH dehydrogenase subunit 2; Provi | 2e-10 | |
| PRK12664 | 527 | PRK12664, PRK12664, putative monovalent cation/H+ | 2e-10 | |
| PRK06591 | 432 | PRK06591, PRK06591, putative monovalent cation/H+ | 2e-10 | |
| MTH00198 | 607 | MTH00198, ND2, NADH dehydrogenase subunit 2; Provi | 3e-10 | |
| PRK08042 | 593 | PRK08042, PRK08042, formate hydrogenlyase subunit | 3e-10 | |
| MTH00112 | 346 | MTH00112, ND2, NADH dehydrogenase subunit 2; Provi | 4e-10 | |
| MTH00144 | 328 | MTH00144, ND2, NADH dehydrogenase subunit 2; Provi | 4e-10 | |
| PRK12647 | 761 | PRK12647, PRK12647, putative monovalent cation/H+ | 6e-10 | |
| PRK06473 | 500 | PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase | 7e-10 | |
| PRK12668 | 581 | PRK12668, PRK12668, putative monovalent cation/H+ | 7e-10 | |
| MTH00217 | 482 | MTH00217, ND4, NADH dehydrogenase subunit 4; Provi | 1e-09 | |
| PRK12561 | 504 | PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase | 1e-09 | |
| TIGR01331 | 249 | TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nu | 1e-09 | |
| TIGR01960 | 606 | TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subun | 2e-09 | |
| PRK12649 | 789 | PRK12649, PRK12649, putative monovalent cation/H+ | 4e-09 | |
| cd01642 | 244 | cd01642, Arch_FBPase_2, Putative fructose-1,6-bisp | 5e-09 | |
| MTH00011 | 330 | MTH00011, ND2, NADH dehydrogenase subunit 2; Valid | 6e-09 | |
| PRK12664 | 527 | PRK12664, PRK12664, putative monovalent cation/H+ | 6e-09 | |
| MTH00165 | 573 | MTH00165, ND5, NADH dehydrogenase subunit 5; Provi | 1e-08 | |
| MTH00041 | 349 | MTH00041, ND2, NADH dehydrogenase subunit 2; Valid | 1e-08 | |
| MTH00151 | 565 | MTH00151, ND5, NADH dehydrogenase subunit 5; Provi | 2e-08 | |
| MTH00112 | 346 | MTH00112, ND2, NADH dehydrogenase subunit 2; Provi | 2e-08 | |
| MTH00226 | 505 | MTH00226, ND4, NADH dehydrogenase subunit 4; Provi | 4e-08 | |
| PRK02546 | 525 | PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase | 5e-08 | |
| MTH00070 | 346 | MTH00070, ND2, NADH dehydrogenase subunit 2; Provi | 1e-07 | |
| MTH00066 | 598 | MTH00066, ND5, NADH dehydrogenase subunit 5; Provi | 2e-07 | |
| PRK07363 | 501 | PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase | 2e-07 | |
| PRK02504 | 513 | PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase | 2e-07 | |
| MTH00209 | 564 | MTH00209, ND5, NADH dehydrogenase subunit 5; Provi | 2e-07 | |
| MTH00207 | 572 | MTH00207, ND5, NADH dehydrogenase subunit 5; Provi | 2e-07 | |
| MTH00200 | 347 | MTH00200, ND2, NADH dehydrogenase subunit 2; Provi | 2e-07 | |
| MTH00204 | 485 | MTH00204, ND4, NADH dehydrogenase subunit 4; Provi | 3e-07 | |
| PRK12650 | 962 | PRK12650, PRK12650, putative monovalent cation/H+ | 3e-07 | |
| PRK07376 | 673 | PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase | 4e-07 | |
| MTH00211 | 597 | MTH00211, ND5, NADH dehydrogenase subunit 5; Provi | 4e-07 | |
| MTH00196 | 365 | MTH00196, ND2, NADH dehydrogenase subunit 2; Provi | 4e-07 | |
| TIGR01960 | 606 | TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subun | 4e-07 | |
| MTH00095 | 527 | MTH00095, ND5, NADH dehydrogenase subunit 5; Provi | 4e-07 | |
| MTH00105 | 347 | MTH00105, ND2, NADH dehydrogenase subunit 2; Provi | 4e-07 | |
| PRK07376 | 673 | PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase | 5e-07 | |
| MTH00144 | 328 | MTH00144, ND2, NADH dehydrogenase subunit 2; Provi | 5e-07 | |
| PRK07390 | 613 | PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase | 7e-07 | |
| MTH00004 | 602 | MTH00004, ND5, NADH dehydrogenase subunit 5; Valid | 1e-06 | |
| PRK08601 | 509 | PRK08601, PRK08601, NADH dehydrogenase subunit 5; | 1e-06 | |
| PRK06590 | 624 | PRK06590, PRK06590, NADH:ubiquinone oxidoreductase | 2e-06 | |
| MTH00210 | 616 | MTH00210, ND5, NADH dehydrogenase subunit 5; Provi | 3e-06 | |
| PLN02911 | 296 | PLN02911, PLN02911, inositol-phosphate phosphatase | 3e-06 | |
| MTH00226 | 505 | MTH00226, ND4, NADH dehydrogenase subunit 4; Provi | 4e-06 | |
| PRK02546 | 525 | PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase | 4e-06 | |
| PRK08168 | 516 | PRK08168, PRK08168, NADH dehydrogenase subunit L; | 4e-06 | |
| PRK06591 | 432 | PRK06591, PRK06591, putative monovalent cation/H+ | 5e-06 | |
| CHL00049 | 494 | CHL00049, ndhB, NADH dehydrogenase subunit 2 | 7e-06 | |
| MTH00197 | 323 | MTH00197, ND2, NADH dehydrogenase subunit 2; Provi | 7e-06 | |
| PRK06459 | 585 | PRK06459, PRK06459, hydrogenase 4 subunit B; Valid | 7e-06 | |
| MTH00032 | 669 | MTH00032, ND5, NADH dehydrogenase subunit 5; Provi | 8e-06 | |
| MTH00208 | 628 | MTH00208, ND5, NADH dehydrogenase subunit 5; Provi | 1e-05 | |
| MTH00014 | 452 | MTH00014, ND4, NADH dehydrogenase subunit 4; Valid | 1e-05 | |
| PRK02504 | 513 | PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase | 1e-05 | |
| PRK12666 | 528 | PRK12666, PRK12666, putative monovalent cation/H+ | 1e-05 | |
| MTH00070 | 346 | MTH00070, ND2, NADH dehydrogenase subunit 2; Provi | 2e-05 | |
| CHL00025 | 741 | CHL00025, ndhF, NADH dehydrogenase subunit 5 | 3e-05 | |
| CHL00011 | 498 | CHL00011, ndhD, NADH dehydrogenase subunit 4 | 3e-05 | |
| PRK12664 | 527 | PRK12664, PRK12664, putative monovalent cation/H+ | 3e-05 | |
| MTH00206 | 450 | MTH00206, ND4, NADH dehydrogenase subunit 4; Provi | 4e-05 | |
| PRK12644 | 965 | PRK12644, PRK12644, putative monovalent cation/H+ | 5e-05 | |
| MTH00210 | 616 | MTH00210, ND5, NADH dehydrogenase subunit 5; Provi | 8e-05 | |
| PRK06588 | 506 | PRK06588, PRK06588, putative monovalent cation/H+ | 9e-05 | |
| PRK12645 | 800 | PRK12645, PRK12645, monovalent cation/H+ antiporte | 1e-04 | |
| MTH00160 | 335 | MTH00160, ND2, NADH dehydrogenase subunit 2; Provi | 1e-04 | |
| MTH00198 | 607 | MTH00198, ND2, NADH dehydrogenase subunit 2; Provi | 2e-04 | |
| MTH00150 | 417 | MTH00150, ND4, NADH dehydrogenase subunit 4; Provi | 3e-04 | |
| MTH00217 | 482 | MTH00217, ND4, NADH dehydrogenase subunit 4; Provi | 4e-04 | |
| MTH00062 | 417 | MTH00062, ND4, NADH dehydrogenase subunit 4; Provi | 4e-04 | |
| MTH00135 | 347 | MTH00135, ND2, NADH dehydrogenase subunit 2; Provi | 4e-04 | |
| MTH00208 | 628 | MTH00208, ND5, NADH dehydrogenase subunit 5; Provi | 5e-04 | |
| MTH00044 | 458 | MTH00044, ND4, NADH dehydrogenase subunit 4; Valid | 6e-04 | |
| MTH00135 | 347 | MTH00135, ND2, NADH dehydrogenase subunit 2; Provi | 6e-04 | |
| MTH00163 | 445 | MTH00163, ND4, NADH dehydrogenase subunit 4; Provi | 0.001 | |
| CHL00025 | 741 | CHL00025, ndhF, NADH dehydrogenase subunit 5 | 0.002 | |
| MTH00199 | 460 | MTH00199, ND2, NADH dehydrogenase subunit 2; Provi | 0.002 | |
| MTH00150 | 417 | MTH00150, ND4, NADH dehydrogenase subunit 4; Provi | 0.003 | |
| PRK07390 | 613 | PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase | 0.003 | |
| MTH00014 | 452 | MTH00014, ND4, NADH dehydrogenase subunit 4; Valid | 0.004 |
| >gnl|CDD|235622 PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed | Back alignment and domain information |
|---|
Score = 512 bits (1321), Expect = e-170
Identities = 211/404 (52%), Positives = 291/404 (72%), Gaps = 12/404 (2%)
Query: 195 ITCITSLIGLLSLVGAPFFSGF------YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLT 248
I I +L+ LL + + GF + +K WI F I Y LG+DG+SL + LT
Sbjct: 34 IALIGTLLTLL--LSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLT 91
Query: 249 AFITLIIILISL-DIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIII 307
A +T + +L S +IKK++ YM+A L L G +IG F ALD +LFY+FFEA LIP++ +I
Sbjct: 92 ALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
Query: 308 GTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK---SFNILSWHQLSITKIEQI 364
G WGG NR YAA KFFLYTL+GSLLML+++IYL + +F+I L + Q
Sbjct: 152 GVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLPLPPGVQY 211
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
WLF+ FFIAFA+K+P++P+HTWLPDAHV+APT GSV+LA I+LK+G YGLLRFSLP+FPD
Sbjct: 212 WLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPD 271
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
AS+ F+ +IITL +I+IIY +L+A+ Q DIKKLIAYSSI+HMGFVTLGIF ++ IQGA
Sbjct: 272 ASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGA 331
Query: 485 IIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
I QMISH L S+A+F+ +G LY+++ TR I+++GG+ V+P + FF+ F++A+ LPGT
Sbjct: 332 IFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
Query: 545 SGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
SGF+GEF+I+L + + N I + +T LI +A YSL L + ++F
Sbjct: 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMF 435
|
Length = 497 |
| >gnl|CDD|223940 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 452 bits (1164), Expect = e-147
Identities = 188/366 (51%), Positives = 266/366 (72%), Gaps = 2/366 (0%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLILSGLIIGA 283
WI + Y LG+DG+SL + LTA +TL+ IL S +I+K+ + + FL+L G +IG
Sbjct: 67 WIPQLGLSYHLGVDGISLLLVLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGV 126
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
F ALD +LFY+F+E LIP++ +IG WGG R YAA KFFLYTL+GSL ML++ +YLY++
Sbjct: 127 FAALDLLLFYVFWELMLIPMYFLIGIWGGKRRIYAATKFFLYTLLGSLFMLLAFLYLYFL 186
Query: 344 SNK-SFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+ +F+IL L++ Q LF+ F IAFA+K+P++P+HTWLPDAHVEAPT GSVIL
Sbjct: 187 TGSPTFDILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVIL 246
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A I+LK+G YGLLRFSLP+FPDAS YF+ L++ L +ISIIY +L+A Q DIK+LIAYSS
Sbjct: 247 AGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSS 306
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
I+HMGFVTLGIF ++ + GA+ QM+SH LIS+A+F+ +G LY + TR I++ GG+ N
Sbjct: 307 ISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERTHTRDIADLGGLAN 366
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+P + F++F++A+ LPGTSGF+GEF+I+L + + + L + LI +A Y L +
Sbjct: 367 KMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFPWVAFLAAFGLILTAVYMLWM 426
Query: 583 SKNIIF 588
+ + F
Sbjct: 427 YQRVFF 432
|
Length = 497 |
| >gnl|CDD|200147 TIGR01972, NDH_I_M, proton-translocating NADH-quinone oxidoreductase, chain M | Back alignment and domain information |
|---|
Score = 446 bits (1150), Expect = e-145
Identities = 191/368 (51%), Positives = 269/368 (73%), Gaps = 1/368 (0%)
Query: 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLILSGLI 280
WI I Y LG+DG+SL + LTA +TL+ IL S I+K++ E+ + L+L +
Sbjct: 60 DIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGV 119
Query: 281 IGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL 340
IG F ALD LFY+F+EA LIP++++IG WGG NR YAA+KFFLYTL GSLLML++++ L
Sbjct: 120 IGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGL 179
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSV 400
Y++ +F++L L + Q WLF+ FFIAFA+K+P++P+HTWLPDAHVEAPT GSV
Sbjct: 180 YFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSV 239
Query: 401 ILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460
ILA ++LK+G YG LRF+LP+FPDAS YF+ ++ L +I+IIY +LIA+ Q DIK+LIAY
Sbjct: 240 ILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAY 299
Query: 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGI 520
SSI+HMGFV LGIF ++ I GA+ QMISH LI++A+F+ +G LY + TR I+ +GG+
Sbjct: 300 SSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGL 359
Query: 521 INVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
N +P + FF++F++A+ LPGTSGF+GEF+I+L + K N + L + ++ +AAY L
Sbjct: 360 ANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYML 419
Query: 581 CLSKNIIF 588
L K + F
Sbjct: 420 TLYKRVFF 427
|
This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex [Energy metabolism, Electron transport]. Length = 481 |
| >gnl|CDD|235836 PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed | Back alignment and domain information |
|---|
Score = 392 bits (1009), Expect = e-123
Identities = 157/300 (52%), Positives = 192/300 (64%), Gaps = 55/300 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR---------------- 44
+S+NL QLF GWE VG+ SYLLIGFWY KP A A +KAF++NR
Sbjct: 133 LSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAE 192
Query: 45 --------------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASA 72
IGAM KSAQFPLHTWLPD+MEGPTP SA
Sbjct: 193 FGSLNYDEVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSA 252
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
LIHAATMVTAG++++ RMSPLFELS AL + +GA+TA F +G++Q DIKR++AYS
Sbjct: 253 LIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYS 312
Query: 133 TLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKY 192
T+SQLGYM + LGV AY +IFHLMTHAFFKALLFL AGS+I M H QDIR MGGL K
Sbjct: 313 TMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKK 372
Query: 193 MPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFIT 252
MP+T T LIG L+L+G P F+GF+SKD + + + N + L + GL + AF+T
Sbjct: 373 MPVTYATFLIGTLALIGIPPFAGFFSKD-EILEAAFANGHINLFVAGL------VGAFLT 425
|
Length = 624 |
| >gnl|CDD|233663 TIGR01974, NDH_I_L, proton-translocating NADH-quinone oxidoreductase, chain L | Back alignment and domain information |
|---|
Score = 346 bits (890), Expect = e-106
Identities = 174/397 (43%), Positives = 222/397 (55%), Gaps = 65/397 (16%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR---------------- 44
+++N QLF GWE VG+ SYLLIGFWY KP A A +KAF++NR
Sbjct: 132 LADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWY 191
Query: 45 -----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIH 75
IGAM KSAQ PLHTWLPD+MEGPTP SALIH
Sbjct: 192 FGTLNFQEVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIH 251
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
AATMVTAG++++ R SPLFELS TAL ++ IGAITA F + ++QNDIKRI+AYST+S
Sbjct: 252 AATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
QLGYM + LGV AY +IFHLMTHAFFKALLFL AGS+I M H QDIR MGGL K MP+
Sbjct: 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPV 371
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLII 255
T IT LIG L+L+G P F+GF+SKD + FL + GL F LTAF + +
Sbjct: 372 TYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAF--LTAFYSFRL 429
Query: 256 ILISLDIKKKLAEY---------MSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306
I + K++ M LI+ L +G+ A G FE + +
Sbjct: 430 IFMVFHGKERHEADHHPHESPLVMLLPLIV--LAVGSVFA--GFFIVPLFE----FLKGV 481
Query: 307 IGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
+ T + L + + ++ ++ Y +
Sbjct: 482 LPTSAEPALEHHH-VPALEIWSPTAVAILGILLAYLL 517
|
This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex [Energy metabolism, Electron transport]. Length = 609 |
| >gnl|CDD|235603 PRK05777, PRK05777, NADH:ubiquinone oxidoreductase subunit N; Provisional | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-103
Identities = 140/315 (44%), Positives = 204/315 (64%), Gaps = 9/315 (2%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+LG M+M+S N+LL+++LGLEL+SL L L A +++ S EAAIKYF+LG L+SGF+LY
Sbjct: 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLY 172
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G+S+LYG TG+L I + + N +L L+ ++VGL+FKL PFHMW PDVY+
Sbjct: 173 GMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYE 232
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
GA +T L+T PK++ F ++ RLL+ L +WQ++L I+AI S+++GN++A++Q
Sbjct: 233 GAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQT 292
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
N KR++AYSSIAH G +L + + + LFY++ Y+F LGAFGVI L
Sbjct: 293 NIKRLLAYSSIAHAGYLLVGLAAGTA--------EGYSAVLFYLLAYLFMTLGAFGVISL 344
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
L+ + F GL +R+P A +M IFM SLAG PPT GF+ KF++FE E
Sbjct: 345 LRRKGGEAES-ISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGL 403
Query: 889 IWLLLLIIMCSLIGA 903
WL ++ ++ S IGA
Sbjct: 404 WWLAVIGVLNSAIGA 418
|
Length = 476 |
| >gnl|CDD|164750 MTH00204, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 323 bits (829), Expect = 5e-99
Identities = 165/358 (46%), Positives = 230/358 (64%), Gaps = 5/358 (1%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLF 292
+DG+SL+FI LT + I ILIS IK E++ L L L+IG F LD +LF
Sbjct: 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLF 137
Query: 293 YIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS-FNI 350
YI FE LIP+F++IG WG + A+ FF YT GS+ ML+ + LY I+ + + I
Sbjct: 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQI 197
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLG 410
L +L ++ Q WL + FF++ A+KIP P H WLP AHVEAP GSVILA I+LKLG
Sbjct: 198 LLNIKLPLSI--QKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLG 255
Query: 411 CYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVT 470
YG LRFS P+FP AS YF+ LI+ LS+I++IY SL Q+D K+LIAYSS+AHMG V
Sbjct: 256 GYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
Query: 471 LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVF 530
LG+F T + A+ M++H +SSA+FI++ FLY + TRLI + G+ +P F +
Sbjct: 316 LGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVII 375
Query: 531 FIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ SLAN P + F+GEF +L+A +++ +GVL ++ +++SAAYSL L I F
Sbjct: 376 MLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISF 433
|
Length = 485 |
| >gnl|CDD|214462 MTH00217, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = 2e-97
Identities = 165/358 (46%), Positives = 236/358 (65%), Gaps = 5/358 (1%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLF 292
+DG+S++F+ LTA +T I ILIS + IK + E++ L++ L++G F LD + F
Sbjct: 75 VFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGF 134
Query: 293 YIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNI 350
YI FE LIP+F+IIG WG + A+ FF YT +GS+ ML+ + LY Y +
Sbjct: 135 YILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQA 194
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLG 410
L L I K Q ++F+ FF++ AIKIP P H WLP AHVEAP GSVILA ++LKLG
Sbjct: 195 LC--CLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLG 252
Query: 411 CYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVT 470
YG +RFS P+ P+AS YFS LI TLSL++IIY SL Q+D+K++IAYSS+AHMG VT
Sbjct: 253 GYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
Query: 471 LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVF 530
LGIF T + AI M++H L+SSA+FI++ FLY + TRLI + G++ +P F +
Sbjct: 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGIL 372
Query: 531 FIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ LAN S+P + F+GEF+ +L+A ++++ +GVL S ++ SA YS+ L + F
Sbjct: 373 MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCF 430
|
Length = 482 |
| >gnl|CDD|223941 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 300 bits (770), Expect = 3e-89
Identities = 143/304 (47%), Positives = 181/304 (59%), Gaps = 55/304 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S+NL LF+ WE+ G+ASYLLIGFWY +P A A KAFL+ R+G
Sbjct: 123 LSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLYLL 182
Query: 47 ----------------------------------AMAKSAQFPLHTWLPDSMEGPTPASA 72
A KSAQFP HTWLPD+MEGPTP SA
Sbjct: 183 TGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDAMEGPTPVSA 242
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
L+HAATMV AG++++ R+SPLF LS AL +++ +GA+TA L+ ++QNDIKRI+AYS
Sbjct: 243 LLHAATMVKAGVYLLARLSPLFALSPEALWLVILVGAVTALLAALIALVQNDIKRILAYS 302
Query: 133 TLSQLGYMTVGLGVS--AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLY 190
T+SQLGYM V LG+ AY +IFHL+THAFFKALLFLSAGS+I +DIR +GGL
Sbjct: 303 TISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHAT-GTRDIRKLGGLR 361
Query: 191 KYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAF 250
K MPIT + LIG L+L G P F+GF+SKD I + GL L + A
Sbjct: 362 KKMPITFVAFLIGALALAGVPPFAGFFSKDM----ILEAALAASHLSGGLLLLLALIGAL 417
Query: 251 ITLI 254
+T
Sbjct: 418 LTAF 421
|
Length = 606 |
| >gnl|CDD|236005 PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 294 bits (754), Expect = 3e-86
Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 69/311 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRI---------------- 45
S NL Q+++ WE+VGM SYLL+GFWYD+ A A KAF++NR+
Sbjct: 141 SPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWAT 200
Query: 46 -----------------------------------GAMAKSAQFPLHTWLPDSMEGPTPA 70
G MAKSAQFPLH WLPD+MEGPTP
Sbjct: 201 GSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPI 260
Query: 71 SALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIA 130
SALIHAATMV AG+F++ RM P+FE +++I + GAITAF + + QNDIK+ +A
Sbjct: 261 SALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
Query: 131 YSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMK----HN----QD 182
YST+SQLGYM + +G AY+ +FHLMTHA+FKA+LFL +GS+I M+ H+ QD
Sbjct: 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQD 380
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSL 242
+R MGGL KYMPIT IT LIG L++ G P F+GF+SKD +I F +L
Sbjct: 381 MRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKD--EILGAAFEAN-------PAL 431
Query: 243 WFIP-LTAFIT 252
WF+ LTA +T
Sbjct: 432 WFVGFLTAGMT 442
|
Length = 673 |
| >gnl|CDD|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related domains | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 2e-84
Identities = 103/242 (42%), Positives = 157/242 (64%), Gaps = 6/242 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI+AARK+ I+ +L L EEK V ++KA EK+I +IL YP + F +
Sbjct: 5 AIEAARKAGEILLEAYEKL-GLNVEEKGSPVDLVTEVDKAVEKLIIEILKKAYPDHGF-L 62
Query: 984 KKSNYLTNFENENI-WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLF 1042
+ + + WIIDPLD TNF H FP + +SIAL K + V+YDPIRN+LF
Sbjct: 63 GEESGAAGGLTDEPTWIIDPLDGTTNFVHGFPHFAVSIALAVKGEPVVGVVYDPIRNELF 122
Query: 1043 TAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQ--IITKCKNLRN 1100
TA++G GA+LN +RIRV+ R ++ DAL+ T F + N + Y F + + +R
Sbjct: 123 TAVRGQGAFLNGRRIRVSGRKELKDALVATGFPYDRGDNFDRYLNNFAKLLAKAVRGVRR 182
Query: 1101 IGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVA 1160
+G+++L+LAYVA+G+LDG++E+GLKPW++AAG+L++ E+GG++++F G L +G+I+A
Sbjct: 183 LGSAALDLAYVAAGRLDGYWERGLKPWDVAAGALIVREAGGLVTDFDGGPFDLMSGNILA 242
Query: 1161 GN 1162
GN
Sbjct: 243 GN 244
|
A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria. Length = 244 |
| >gnl|CDD|237137 PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (722), Expect = 1e-83
Identities = 131/332 (39%), Positives = 202/332 (60%), Gaps = 1/332 (0%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + LG+DGLS+ + L+ IT + I S + +K + L+L IG F
Sbjct: 45 WLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPRLFYFLMLVLYSAQIGVF 104
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL-YYI 343
A D +LF++ +E L+P++++I WGG R YAA KF LYT + S+ +L++ + L
Sbjct: 105 LAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSG 164
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+F++ S ++ L+ F IAF +K+PI+P+HTWLPDAH EA S+ILA
Sbjct: 165 DTFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILA 224
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
++LK+G Y L+RF++ + PDA YF+ + L +++IIY +L A Q ++K+ +AYSS+
Sbjct: 225 GVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSV 284
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMGFV LGI T + I GA++QMISH LI++A+F G Y + T I N GG+ V
Sbjct: 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKV 344
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
+P F S+A+ +LPG SGF+ E + L
Sbjct: 345 MPKTFALFTASSMASLALPGMSGFVSELTVFL 376
|
Length = 504 |
| >gnl|CDD|223939 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 2e-83
Identities = 140/392 (35%), Positives = 216/392 (55%), Gaps = 20/392 (5%)
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLC 581
+++ + +V ++ +LA+ G I+ A+ I VL ++ +
Sbjct: 33 SLLAYLAVLGLLAALASLLFIAYRGSAFAGAFIVDALALLMKIVVLLASLAALILSLPYL 92
Query: 582 LSKN----------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEA 631
+ LG ++M S NNLL +++GLEL+SL L VL A ++++ SSEA
Sbjct: 93 ERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEA 152
Query: 632 AIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLS 691
A+KYF+LG LSS F+LYGI+++YG TG+L L I + L L L+ II GL
Sbjct: 153 ALKYFVLGALSSAFLLYGIALVYGATGSLSLSGIAAYLNGGGEP-LGLLLGLVFIIAGLG 211
Query: 692 FKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751
FKL PFHMW PDVY+GA +T LST PK++ F ++ R+ + P +W I I
Sbjct: 212 FKLSAVPFHMWTPDVYEGAPTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAI 271
Query: 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFY 811
+A+ S+++GN +A++Q N KR++AYSSIAHMG +L + ++ + LFY
Sbjct: 272 IAVASMLVGNFAALSQTNVKRLLAYSSIAHMGYLLVGLAAVTVGGYA--------AVLFY 323
Query: 812 IITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTI 871
++ Y F LGAFGV+ LL + + + GL +R+P A ++ I M SLAG PP
Sbjct: 324 LLAYAFMSLGAFGVVALLSSKE-GGAESISDLAGLSKRHPLLAALLTILMLSLAGIPPLA 382
Query: 872 GFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
GF+ KF++F + WL ++ ++ S I A
Sbjct: 383 GFWGKFYVFLAAVQAGLWWLAVIAVLNSAISA 414
|
Length = 475 |
| >gnl|CDD|235810 PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase subunit D4; Validated | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 5e-80
Identities = 137/335 (40%), Positives = 209/335 (62%), Gaps = 8/335 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
WID + Y LG+DGLSL + L + +TLI I S + ++ Y S L+L+ + GAF
Sbjct: 65 WIDSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAF 124
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLIS---MIYLY 341
A D +LF++F+E LIP++++I WGG R YAA KF LYT + +L+L+S +++L
Sbjct: 125 LAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLS 184
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
S+ + L H L ++ Q+ L + F IKIP+ P HTWLPDAHVEA T SV+
Sbjct: 185 GASSFDYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVL 242
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
LA ++LKLG YGLLRF + +FP+A Y + + T +++S++Y + A+ Q D+KK++AYS
Sbjct: 243 LAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYS 302
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI HMG++ L T +SI A+ QMISH LIS+ +F+ +G +Y + +R + G++
Sbjct: 303 SIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLL 362
Query: 522 NV---IPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
N +P I+ +A+ +PG GFI EF++
Sbjct: 363 NPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
Length = 500 |
| >gnl|CDD|177253 MTH00210, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 273 bits (699), Expect = 2e-79
Identities = 138/265 (52%), Positives = 169/265 (63%), Gaps = 46/265 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+N QLF+GWE VG+ SYLLI FW + A A +KA LINR
Sbjct: 130 SDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEF 189
Query: 45 -----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIH 75
IGA+ KSAQ LHTWLPD+MEGPTP SALIH
Sbjct: 190 GTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIH 249
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
AATMVTAG+F+I R PLFE S AL+I+ +GA+TAFF +G++QND+K++IAYST S
Sbjct: 250 AATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCS 309
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
QLGYM + G+S Y+ S+FHLM HAFFKALLFLSAGS+I + QD+R MGGL K +P
Sbjct: 310 QLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPF 369
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKD 220
T + LIG LSL+G P+ +GFYSKD
Sbjct: 370 TYVMILIGSLSLMGFPYLTGFYSKD 394
|
Length = 616 |
| >gnl|CDD|214400 MTH00020, ND5, NADH dehydrogenase subunit 5; Reviewed | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 3e-78
Identities = 167/400 (41%), Positives = 224/400 (56%), Gaps = 63/400 (15%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+N QLF+GWE VG+ SYLLI FW + A A +KA L+NR
Sbjct: 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
Query: 45 ----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIHA 76
IGA+ KSAQ LHTWLPD+MEGPTP SALIHA
Sbjct: 190 GSLDFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHA 249
Query: 77 ATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQ 136
ATMVTAG+F++ R SPLFE + AL I+ +G++T FF +G++QND+K++IAYST SQ
Sbjct: 250 ATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQ 309
Query: 137 LGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT 196
LGYM V G+S Y++S+FHLM HAFFKALLFLSAGS+I + QD+R MGGL ++P+T
Sbjct: 310 LGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLT 369
Query: 197 CITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIII 256
I LIG LSL+G P+ +GFYSKD I F YY + L + LTAF ++ +I
Sbjct: 370 YIFFLIGSLSLMGFPYLTGFYSKD--LILELAFGQYYLIFAYWLGCFSALLTAFYSIRLI 427
Query: 257 LISL--DIKKKLAEYMSA----FLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310
++ + K A + + +L L I A G +F + +I F I
Sbjct: 428 YLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILAL----GSIFVGYLAKEMIWSFQI---- 479
Query: 311 GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNI 350
+IK L + SL + +I LY+ S+K+F +
Sbjct: 480 TLPPIVPLSIK--LLPVFLSLGGIGLVIILYFYSSKTFRV 517
|
Length = 610 |
| >gnl|CDD|233565 TIGR01770, NDH_I_N, proton-translocating NADH-quinone oxidoreductase, chain N | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 5e-78
Identities = 152/430 (35%), Positives = 234/430 (54%), Gaps = 24/430 (5%)
Query: 484 AIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543
AI+ I L + + + F + + L+ I ++ F+ A+ G
Sbjct: 3 AILPEIILLLGAFILLLYGLFYSRKKRNPLLLKNLFYIVLLSLLVSLFLTLQYASYLFFG 62
Query: 544 TSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNI----------IFVLGQM 593
S FI + ++ + +L ST L+F A S + I +LG
Sbjct: 63 FSFFIVDNFSLIIK------LILLLSTLLLFFFALSYFSKEKINKFEFYILLLFALLGIF 116
Query: 594 IMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISIL 653
+++S N+LLSIYLGLEL SL VL A ++ + FS+EA +KYFILG SSG +L+GIS++
Sbjct: 117 LLVSSNDLLSIYLGLELQSLCFYVLAALKRKSRFSTEAGLKYFILGAFSSGLLLFGISLI 176
Query: 654 YGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASII 713
YG TG+L + + + + S+L L ++ I+VGL FKL PFHMWVPDVY+GA
Sbjct: 177 YGFTGSLNFEDLLLFLSNLGNDISLLLLGIVFILVGLLFKLSAVPFHMWVPDVYEGAPTP 236
Query: 714 ITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRM 773
+T S PK+++F ++ RL L WQ LLI A+ S++IGN A+ Q KR+
Sbjct: 237 VTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLLICAVLSMLIGNFGALAQKKVKRL 296
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNT 833
+AYSSI+H+G +L +++ + LFYI Y +GAFGV+ LL++
Sbjct: 297 LAYSSISHVGYILIGLLAGT--------LEGIKAVLFYIFIYALMSIGAFGVLALLRSRK 348
Query: 834 CNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL 893
+ + F GL + NP A++++IFMFSLAG PP GF+ KF++F + ++ L +
Sbjct: 349 DEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYLLAV 408
Query: 894 LIIMCSLIGA 903
+ I+ S+I A
Sbjct: 409 IAILTSVISA 418
|
This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone [Energy metabolism, Electron transport]. Length = 468 |
| >gnl|CDD|214398 MTH00004, ND5, NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 2e-76
Identities = 127/261 (48%), Positives = 164/261 (62%), Gaps = 44/261 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
+NN+FQLF+GWE VG+ S+LLIG+W + A TA L+A + NRIG
Sbjct: 134 ANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTL 193
Query: 47 -------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVT 81
A KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 194 NTWEIQQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVV 253
Query: 82 AGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMT 141
AGIF++ R PL + + TAL+I L +GA+T F + QNDIK+IIA+ST SQLG M
Sbjct: 254 AGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMM 313
Query: 142 VGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CIT 199
V +G++ ++ H+ THAFFKA+LFL +GSII N+ + QDIR MGGL K +PIT C+T
Sbjct: 314 VTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLT 373
Query: 200 SLIGLLSLVGAPFFSGFYSKD 220
IG L+L+G PF SGFYSKD
Sbjct: 374 --IGNLALMGTPFLSGFYSKD 392
|
Length = 602 |
| >gnl|CDD|214338 CHL00025, ndhF, NADH dehydrogenase subunit 5 | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 1e-74
Identities = 127/278 (45%), Positives = 165/278 (59%), Gaps = 59/278 (21%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
S+NL Q+++ WE+VGM SYLLIGFW+ +P+A A KAF+ NR+G
Sbjct: 141 SSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIT 200
Query: 47 ------------------------------------AMAKSAQFPLHTWLPDSMEGPTPA 70
+AKSAQFPLH WLPD+MEGPTP
Sbjct: 201 GSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPI 260
Query: 71 SALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIA 130
SALIHAATMV AGIF++ R+ PLF + +++I IG ITA L + Q DIKR +A
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
Query: 131 YSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINM--------KHNQD 182
YST+SQLGYM + LG+ +Y ++FHL+THA+ KALLFL +GS+I +M +Q+
Sbjct: 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQN 380
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+ MGGL KYMPIT T L+G LSL G P + F+SKD
Sbjct: 381 MVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD 418
|
Length = 741 |
| >gnl|CDD|177170 MTH00108, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 3e-73
Identities = 124/260 (47%), Positives = 162/260 (62%), Gaps = 41/260 (15%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------AMA------ 49
+NNLFQLF+GWE VG+ S+LLIG+WY + A TA L+A L NRIG AMA
Sbjct: 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNL 193
Query: 50 -----------------------------KSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 194 NSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 253
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AG+F++ R PL E + T ++ L +GAIT F + + QNDIK+I+A+ST SQLG M
Sbjct: 254 VAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITS 200
V +G++ ++ H+ THAFFKA+LF+ +GSII N+ QDIR MGGL+K +P T
Sbjct: 314 MVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTAL 373
Query: 201 LIGLLSLVGAPFFSGFYSKD 220
+IG L+L G PF +GFYSKD
Sbjct: 374 IIGSLALTGMPFLTGFYSKD 393
|
Length = 602 |
| >gnl|CDD|214428 MTH00137, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 4e-73
Identities = 124/262 (47%), Positives = 163/262 (62%), Gaps = 46/262 (17%)
Query: 3 NNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------AMA------- 49
NN+FQLF+GWE VG+ S+LLIG+WY + A TA L+A + NR+G AMA
Sbjct: 139 NNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLN 198
Query: 50 -----------------------------KSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 199 SWEIQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AGIF++ R+SPL E + TAL+ L +GA+T F + QNDIK+I+A+ST SQLG M
Sbjct: 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLM 318
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CI 198
V +G++ ++ H+ THAFFKA+LFL +GSII ++ QDIR MGGL+ P T C+
Sbjct: 319 MVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCL 378
Query: 199 TSLIGLLSLVGAPFFSGFYSKD 220
T IG L+L G PF +GF+SKD
Sbjct: 379 T--IGSLALTGTPFLAGFFSKD 398
|
Length = 611 |
| >gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 4e-73
Identities = 128/373 (34%), Positives = 206/373 (55%), Gaps = 9/373 (2%)
Query: 212 FFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKK---LAE 268
F F + + NI YF G+D LS I L+ +I +++IL S + KK
Sbjct: 29 FLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNL 88
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN-RSYAAIKFFLYTL 327
++ L L ++ F +++ +LFYIFFE++LIP +I WG R A I YTL
Sbjct: 89 FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTL 148
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
SL +L+ + YLY + LS+ L+ +++ +AF +K+P++ +H WL
Sbjct: 149 FASLPLLVGIFYLY----NNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWL 204
Query: 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
P AHVEAP GS+ILA ++LKLG YGLLR + F F+ + I++SL+ + +SLI
Sbjct: 205 PKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLI 263
Query: 448 AMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN 507
+ Q+D+K LIAYSS+AHMG V G+ + + G+++ MI H L SS +F +Y
Sbjct: 264 CLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYE 323
Query: 508 QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVL 567
++ +R + G++N +P S+++ + S +N + P + +GE +I S + ++ +
Sbjct: 324 RLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
Query: 568 TSTALIFSAAYSL 580
FSAAYSL
Sbjct: 384 LMLLSFFSAAYSL 396
|
Length = 445 |
| >gnl|CDD|214466 MTH00226, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 6e-73
Identities = 147/357 (41%), Positives = 219/357 (61%), Gaps = 3/357 (0%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIKKKLAE-YMSAFLILSGLIIGAFCALDGMLFY 293
+DG+S++FI LT FI ILIS K L + ++ LIL L+ F LD +FY
Sbjct: 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFY 157
Query: 294 IFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS-FNIL 351
I FE LIP+++I+G WG + AA FF YTL+GS+LML+ + LY I + + L
Sbjct: 158 ILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL 217
Query: 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGC 411
+ +++ Q W+F+ F+A A+KIPI+P H WLP AHVEAP GSV+LA I+LKLG
Sbjct: 218 ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGG 277
Query: 412 YGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTL 471
YGL+R S PI P + + +I + ++ I+Y S QID+K+L+AYSS+AHMG V++
Sbjct: 278 YGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
Query: 472 GIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFF 531
+ I + G+I M++H ++SS +FI + LY++ TRLI + G+ +P +
Sbjct: 338 TLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIM 397
Query: 532 IIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
I+ SLAN ++P + FIGE++ ILS+ +N IGV + +I SA YS + + F
Sbjct: 398 IVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTF 454
|
Length = 505 |
| >gnl|CDD|176954 CHL00011, ndhD, NADH dehydrogenase subunit 4 | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 7e-73
Identities = 140/384 (36%), Positives = 218/384 (56%), Gaps = 22/384 (5%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
WI++F+ ++ LGIDGLS+ I LT FIT + L + + + + L + IG F
Sbjct: 70 WINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLF 129
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGS--LLMLISMIYLYY 342
+ D +LF+I +E LIP+++++ WGG R Y+A KF LYT GS LL+ + + LY
Sbjct: 130 SSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGMGLYG 189
Query: 343 ISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+ + N + S +I +I F IA+A+K+PI P+HTWLPD H EA ++L
Sbjct: 190 SNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLL 249
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A I+LK+G YGL+R ++ + P A FS ++ + I IIY + ++ Q ++KK IAYSS
Sbjct: 250 AGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSS 309
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
++HMGF+ +GI +T + GAI+Q+ISH I +A+F G Y++++ + GGI
Sbjct: 310 VSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAI 369
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+P F FS+A+ +LPG SGF+ E ++ G++TS Y L +
Sbjct: 370 PMPKIFTMFSSFSMASLALPGMSGFVAELIVFF---------GIITSQ------KYLL-M 413
Query: 583 SKNIIFVLGQMIMISGNNLLSIYL 606
K +I + + MI L IYL
Sbjct: 414 PKILITFVMAIGMI----LTPIYL 433
|
Length = 498 |
| >gnl|CDD|235050 PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 3e-71
Identities = 129/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + +G DGLS+ I LT FIT + +L + + K + L + G I F
Sbjct: 73 WLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVF 132
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL-YYI 343
D +LF++ +E LIP+++++ WGG R YAA KF LYT SL +L++ + + +Y
Sbjct: 133 AVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYG 192
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+F++ + Q+ + IA+ +K+PI P+HTWLPDAH EA ++LA
Sbjct: 193 DTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLA 252
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
I+LK+G Y LLR + + PDA F+ L+I L +++IIY +L + Q ++K+ IAYSSI
Sbjct: 253 GILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 312
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMGFV +GI T + GA++QMISH LI +++F +G Y++ T ++ GG+
Sbjct: 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQK 372
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK-------FNFCIGVLTSTALIFSA 576
+ + SLA+ +LPG SGF+ E M+ + F + L + +I +
Sbjct: 373 MRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVGVILTP 432
Query: 577 AYSLCLSKNIIF 588
Y L + + I F
Sbjct: 433 IYLLSMLREIFF 444
|
Length = 525 |
| >gnl|CDD|214416 MTH00066, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 3e-71
Identities = 126/261 (48%), Positives = 164/261 (62%), Gaps = 44/261 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
+NNLFQLF+GWE VG+ S+LLIG+W+ + A TA L+A L NR+G
Sbjct: 132 ANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNT 191
Query: 47 -------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVT 81
A KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 192 NSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVV 251
Query: 82 AGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMT 141
AGIF++ R PL E + TAL+I L +GA+T F + QNDIK+I+A+ST SQLG M
Sbjct: 252 AGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMM 311
Query: 142 VGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CIT 199
V +G++ ++ FH+ THAFFKA+LFL +GSII ++ QDIR MGGL K +PIT C+T
Sbjct: 312 VTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLT 371
Query: 200 SLIGLLSLVGAPFFSGFYSKD 220
IG L+L G PF +GF+SKD
Sbjct: 372 --IGSLALTGTPFLAGFFSKD 390
|
Length = 598 |
| >gnl|CDD|214435 MTH00150, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 3e-70
Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 6/354 (1%)
Query: 233 YFLGIDGLSLWFIPLTAFITLIIILISLDIKKKL---AEYMSAFLILSGLIIGAFCALDG 289
+D +S I L+ +I+ +++L S K + + L+L +++ AF
Sbjct: 18 ELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSL 77
Query: 290 MLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSF 348
++FY FFEA+LIP ++I WG R A + LYT+ SL +L+ ++++ S S
Sbjct: 78 LMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSS-SYGSS 136
Query: 349 NILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLK 408
+L L + F+AF +K+P++P H WLP AHVEAP GS+ILA I+LK
Sbjct: 137 FMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLK 196
Query: 409 LGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGF 468
LG YG+LR + +F +S FS +I+LSL + SLI + Q D+K LIAYSS+ HM
Sbjct: 197 LGGYGILRMMM-VFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
Query: 469 VTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528
V G+ T GA+I M+SH SS +F + Y ++ +R + G++ + P S
Sbjct: 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
Query: 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+++ +F + N + P + + E MI S + ++ V + S YSL L
Sbjct: 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
|
Length = 417 |
| >gnl|CDD|214459 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 1e-67
Identities = 120/260 (46%), Positives = 160/260 (61%), Gaps = 40/260 (15%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+NNLFQLF+GWE VG+ S+LLI +WY + A TA L+A + NRIG
Sbjct: 128 SANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
Query: 47 --------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
AM KSAQF H WLP +MEGPTP SAL+H++TMV
Sbjct: 188 LNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMV 247
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AG+F++ R+SPLF+ + L +L +GA+T F L + QNDIK+I+A+ST SQLG M
Sbjct: 248 VAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLM 307
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITS 200
V LG++ ++ H+ THAFFKA+LF+ +GSII + + QDIR MGGL K +P T
Sbjct: 308 MVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCL 367
Query: 201 LIGLLSLVGAPFFSGFYSKD 220
+G L+L+G PF SGF+SKD
Sbjct: 368 FLGSLALMGFPFLSGFFSKD 387
|
Length = 597 |
| >gnl|CDD|180945 PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase subunit M; Validated | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-64
Identities = 122/335 (36%), Positives = 200/335 (59%), Gaps = 8/335 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W + + Y LG+DGLSL + L + +T I I + ++ Y S L+++G I GA
Sbjct: 65 WNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGAL 124
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLML---ISMIYLY 341
A + +LF++F+E LIP +++I WGG R YA+IKF +YT + LL+L + +++L
Sbjct: 125 LAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLS 184
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
++ ++ +S LS+ Q+ L + F IKIP+ P+HTWLPDA+ EA +++
Sbjct: 185 GSTSFDYDAISTQNLSLNT--QLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAIL 242
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
L ++ KLG YGLLRF L +FP + + + IS+IY +L A+ Q DIK+++AYS
Sbjct: 243 LGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYS 302
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI HMG++ + T++S+ GA+ QMISH LI + +F +G + ++ TR + G++
Sbjct: 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLM 362
Query: 522 NVI---PHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
N I P S ++ +A+ +PG GF+ EF++
Sbjct: 363 NPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
Length = 501 |
| >gnl|CDD|236753 PRK10757, PRK10757, inositol monophosphatase; Provisional | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 7e-64
Identities = 97/250 (38%), Positives = 161/250 (64%), Gaps = 1/250 (0%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A++AARK+ +I + + + +K +FV N++KA+E +I + +YP + + +
Sbjct: 8 AVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITE 67
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+S L + + W+IDPLD TNF P + +SIA++ K + +V+YDP+RN+LFTA
Sbjct: 68 ESGELEGEDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTA 127
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIGT 1103
+G GA LN R+R + ++ ++ T F FK ++ Y I ++ T+C + R G+
Sbjct: 128 TRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQHATTYINIVGKLFTECADFRRTGS 187
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQ 1163
++L+LAYVA+G++DGFFE GLKPW+ AAG LL+ E+GGI+S+F G NY+ TG+IVAGN
Sbjct: 188 AALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNP 247
Query: 1164 KIFSQIISLI 1173
++ +++ +
Sbjct: 248 RVVKAMLANM 257
|
Length = 267 |
| >gnl|CDD|177251 MTH00208, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 8e-64
Identities = 118/263 (44%), Positives = 159/263 (60%), Gaps = 44/263 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
SNNLF LF+GWE VG S+LLI +W + A ++ L+A + NRIG
Sbjct: 157 SNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINF 216
Query: 47 -----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAA 77
A KSAQF LH WLP +MEGPTP SAL+H++
Sbjct: 217 NSWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSS 276
Query: 78 TMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQL 137
TMV AG+F++ R SPL S LS+ L +G++TA F I Q+DIK+IIAYST SQL
Sbjct: 277 TMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQL 336
Query: 138 GYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITC 197
G M V +G++ +++FH+ THAFFKA+LFL +GSII ++ + QD+R MGGL +P+T
Sbjct: 337 GLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTS 396
Query: 198 ITSLIGLLSLVGAPFFSGFYSKD 220
++G L+L+G PF +GFYSKD
Sbjct: 397 SCIILGSLALMGTPFLAGFYSKD 419
|
Length = 628 |
| >gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 2e-63
Identities = 98/253 (38%), Positives = 154/253 (60%), Gaps = 3/253 (1%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
A++AARK+ +I EL+ + E KK + V +KA+E+II L +P + L
Sbjct: 8 ALRAARKAGALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDHGILG 67
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
++S +E +W+IDP+D TNF P + +SIAL + + VIYDP +L+T
Sbjct: 68 EESGGALGGGDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYDPATGELYT 127
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIG 1102
A KG GAYLN +RI+V+ R +N +L+GT F K+ Y I +++ K + +R G
Sbjct: 128 AAKGKGAYLNGRRIKVSLRTSLNASLLGTGFPGKSLARFPAYLNILAKLLRKVRRVRRYG 187
Query: 1103 TSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK-NYLYTGDIVAG 1161
+++L+LAYVA+G+LDGF E GL+PW+IAAG L++ E+GGI+++ G + G IVAG
Sbjct: 188 SAALDLAYVAAGRLDGFVEFGLRPWDIAAGVLIVREAGGIVTDLDGGPLDPNSGGSIVAG 247
Query: 1162 NQKIFSQIISLIN 1174
N K+ +++ +
Sbjct: 248 NPKLHDELLEALR 260
|
Length = 260 |
| >gnl|CDD|214458 MTH00206, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 2e-63
Identities = 131/385 (34%), Positives = 202/385 (52%), Gaps = 13/385 (3%)
Query: 203 GLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI 262
S + A F ++ + W +L D LS + L+ ++ ++ L S +
Sbjct: 26 TFFSFLIALLFLLWFKWSSEVGWS---FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNH 82
Query: 263 KKKLAE-----YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWG-GSNRS 316
K Y++ ++L +I F + + +LFYI FEA+LIP ++I WG R
Sbjct: 83 MKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERL 142
Query: 317 YAAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375
A F YTL+GSL +LI++++L + + S IL + +L+ WL +AF
Sbjct: 143 NAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLAC--ILAFL 200
Query: 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIIT 435
+K+P++ +H WLP AHVEAP GS++LA ++LKLG YG++R L + P II
Sbjct: 201 VKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFII- 259
Query: 436 LSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALIS 495
L L I S I + Q D+K LIAYSS++HM VT GI + +GA++ MI+H L+S
Sbjct: 260 LGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVS 319
Query: 496 SAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
SA+F LY + TR I G+ ++P S ++++F LAN LP GE +II
Sbjct: 320 SALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIIT 379
Query: 556 SAVKFNFCIGVLTSTALIFSAAYSL 580
S ++ L +F+A YSL
Sbjct: 380 SLFSWSNFTLPLLGLGFLFTAIYSL 404
|
Length = 450 |
| >gnl|CDD|214457 MTH00205, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 4e-60
Identities = 122/371 (32%), Positives = 195/371 (52%), Gaps = 6/371 (1%)
Query: 216 FYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKKLAEYMSAFL 274
F S ++ I D LSL I L+ +I+L+++L S + K +
Sbjct: 34 FSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVS 93
Query: 275 ILSGLIIG--AFCALDGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSL 331
++ L+I +F + +LFYI FEA+LIP I+I WG R A++ +YTL SL
Sbjct: 94 VIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASL 153
Query: 332 LMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAH 391
+LI + +L N S ++ L+ + +I +AF +K+P++ +H WLP AH
Sbjct: 154 PLLIGLFFLNS-LNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAH 212
Query: 392 VEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQ 451
VEAP GS+ILA ++LKLG YGL+R + ++ + FS L ++SL + +I + Q
Sbjct: 213 VEAPVSGSMILAGVLLKLGGYGLIRITSMLY-KLNSNFSELFFSISLWGGVMTGMICLRQ 271
Query: 452 IDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511
+D+K LIAYSS+ HMG + +G+F T + GAII M++H L SS MF Y + +
Sbjct: 272 VDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNS 331
Query: 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTA 571
R + G++N P + + + N + P + E ++I+S + + G+ S
Sbjct: 332 RSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLI 391
Query: 572 LIFSAAYSLCL 582
S AYSL L
Sbjct: 392 SFLSGAYSLYL 402
|
Length = 448 |
| >gnl|CDD|214417 MTH00068, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 2e-59
Identities = 133/357 (37%), Positives = 201/357 (56%), Gaps = 13/357 (3%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAE-----YMSAFLILSGLIIGAFCALD 288
+ GID +S + LT ++ ++IL S + K Y+S +IL +I AF A +
Sbjct: 55 YFGIDQISSPLLILTCWLLPLMILASQNHLKNEPINRQRTYISMLIILQLTLILAFSATE 114
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFL-YTLMGSLLMLISMIYLYYISNKS 347
+LFYIFFEATLIP III WG A +FL YTL GSL +LI+++ L S
Sbjct: 115 LILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLG-S 173
Query: 348 FNILSWHQLSITKIE----QIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+++ +S ++ +IW +AF +K+P++ +H WLP AHVEAP GS+ILA
Sbjct: 174 LSLILLELMSPMQLMTYTNKIWWL-ACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILA 232
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
A++LKLG YG+LR S + S S I L+L ++ SLI + Q D+K LIAYSS+
Sbjct: 233 AVLLKLGGYGILRIS-ILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSV 291
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMG V + T S GAII MISH L SSA+F Y + +R + G +
Sbjct: 292 SHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTI 351
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
+P + ++++ +L+N +LP + GE I++S ++ ++T + +AAY+L
Sbjct: 352 LPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTL 408
|
Length = 458 |
| >gnl|CDD|214411 MTH00044, ND4, NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 4e-59
Identities = 135/362 (37%), Positives = 193/362 (53%), Gaps = 10/362 (2%)
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMS-AFLILSGLIIGA--- 283
+ N+ L D LS I L+ ++ + +L S++ + F+ L +I+ A
Sbjct: 50 WHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQRTFISLIIIILTALII 109
Query: 284 -FCALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLY 341
F +L+ +LFYI FE TLIP I+I WG R A + F YTL GSL +LIS+I +Y
Sbjct: 110 TFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
Query: 342 YISNKSF---NILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEG 398
S+ + L+W + IW +AF +K+PI+ H WLP AHVEAP G
Sbjct: 170 SSSSSLSIPLSELNWLTSLSSNSSSIWWIFCI-LAFLVKMPIYGFHLWLPKAHVEAPVAG 228
Query: 399 SVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458
S+ILAAI+LKLG YGL+R ++ S ++I + S+I + Q D+K LI
Sbjct: 229 SMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALI 288
Query: 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518
AYSS+ HM V GIF T I GA+I MI+H L+SSA+F LY + TR +S
Sbjct: 289 AYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITR 348
Query: 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAY 578
G + P ++++IF AN LP IGE +II S + ++ + A +F A Y
Sbjct: 349 GFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIY 408
Query: 579 SL 580
SL
Sbjct: 409 SL 410
|
Length = 458 |
| >gnl|CDD|214427 MTH00124, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 209 bits (535), Expect = 8e-59
Identities = 116/318 (36%), Positives = 181/318 (56%), Gaps = 10/318 (3%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTL 327
+++ ++L +I AF A + LFYI FEATLIP I+I WG R A F YTL
Sbjct: 95 FLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTL 154
Query: 328 MGSLLMLISMIYLYYISNKS--FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385
+ SL +LI+++YL+ + + H + L++ +AF +K+P++ +H
Sbjct: 155 ISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHL 214
Query: 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYIS 445
WLP AHVEAP GS++LAAI+LKLG YG++R + + P S +TL+L + S
Sbjct: 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIIRIT-LLLPPLSNTLHYPFLTLALWGALMTS 273
Query: 446 LIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFL 505
LI + Q D+K LIAYSS++HMG V + T S+ GA+I MI+H L SS +F
Sbjct: 274 LICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTN 333
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-- 563
Y + +R + G+ ++P + ++++ +L N +LP T +GE I+ S FN+
Sbjct: 334 YERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSL--FNWSPT 391
Query: 564 -IGVLTSTALIFSAAYSL 580
I +LT A + +A+Y+L
Sbjct: 392 TI-ILTGLATLITASYTL 408
|
Length = 457 |
| >gnl|CDD|201180 pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I), various chains | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 1e-58
Identities = 98/273 (35%), Positives = 158/273 (57%), Gaps = 4/273 (1%)
Query: 286 ALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYIS 344
+ + +L Y+ +E +P +++IG WG S A++K+FLYT +GSL +L ++YLY ++
Sbjct: 1 SNNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLT 60
Query: 345 NKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAA 404
S + + + L + +AF +K P +P H WLPDA P S+ILA
Sbjct: 61 G-SLSFTLLFLFGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLILAT 119
Query: 405 IMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
+ K G Y LLR S +S S +++ L ++S++ SL A+ Q DIKKL+AYSSI+
Sbjct: 120 TLKKAGLYLLLRLSNLFS--SSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSSIS 177
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
HMGF+ +GI L I GAII +ISH S+ +F+ G + ++ +R + N+GG+ N +
Sbjct: 178 HMGFMLIGILSLGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRSGSRDLRNYGGLFNSM 237
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
P ++ ++ L+ LP GFI +F+I+ S
Sbjct: 238 PILALLLLLLLLSLSGLPPLLGFISKFLILESL 270
|
This family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. Length = 270 |
| >gnl|CDD|214399 MTH00014, ND4, NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 4e-56
Identities = 131/359 (36%), Positives = 201/359 (55%), Gaps = 6/359 (1%)
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAF 284
Y L D LS I LT +IT ++IL S I K +M+ LIL+ +++ F
Sbjct: 48 YSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTF 107
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
A + ++FYIFFEA+LIP +I WG R A+ +YT+ SL +L+S++ ++Y
Sbjct: 108 SASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYT 167
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+N ++S + + +W IT +AF +K+P++ +H WLP AHVEAP GS+ILA
Sbjct: 168 NNSLSMLMSSMEPPSIYLMNLWWLITI-LAFMVKMPLYTVHLWLPKAHVEAPVAGSMILA 226
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
I+LKLG YGLLR S +F + S ++SL+ + SLI + Q D+K LIAYSS+
Sbjct: 227 GILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSV 285
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
HMG +T GI T QGA+ MI+H L SSA+F Y TR + G++++
Sbjct: 286 GHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSL 345
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
P ++++ + S AN + P + + E M++ S + + +L + +AAYSL L
Sbjct: 346 FPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFL 404
|
Length = 452 |
| >gnl|CDD|177172 MTH00110, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 5e-55
Identities = 123/328 (37%), Positives = 190/328 (57%), Gaps = 18/328 (5%)
Query: 262 IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN-RSYAAI 320
+KKL Y++ ++L +I F A + ++FYI FEATLIP III WG R A +
Sbjct: 90 TRKKL--YITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGL 147
Query: 321 KFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIW----LFITFFIAFAI 376
F YTL+GSL +L++++Y+ + S N L QL + W L++ +AF +
Sbjct: 148 YFLFYTLVGSLPLLVALLYIQN-NLGSLNFLLL-QLWAQPLPNSWSNNLLWLACMMAFMV 205
Query: 377 KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSL---PIFPDASYYFSNLI 433
K+P++ +H WLP AHVEAP GS++LAAI+LKLG YG++R ++ P+ +Y F
Sbjct: 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPF---- 261
Query: 434 ITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHAL 493
+ LSL +I S I + Q D+K LIAYSS++HM V + I + T S GA MI+H L
Sbjct: 262 LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
SS +F Y ++ +R + G+ ++P + ++++ SL N +LP T IGE +
Sbjct: 322 TSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFV 381
Query: 554 ILSAVKF-NFCIGVLTSTALIFSAAYSL 580
I+S+ + N I +L ++ +A YSL
Sbjct: 382 IMSSFSWSNITI-ILMGLNMLITALYSL 408
|
Length = 459 |
| >gnl|CDD|214407 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 5e-54
Identities = 111/199 (55%), Positives = 143/199 (71%), Gaps = 4/199 (2%)
Query: 24 GFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAG 83
G Y+ PLA A + L+ IG + KSAQ LHTWLPD+MEGPTP SALIHAATMVTAG
Sbjct: 214 GGAYESPLAPFAIIGILLL--IGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAG 271
Query: 84 IFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVG 143
+F++ R PLFE + L II GA+TAFF +G++QND+K++IAYST SQLGYM +
Sbjct: 272 VFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLI 331
Query: 144 LGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHN-QDIRNMGGLYKYMPITCITSL 201
+G+ ++ V +FHL+ HAFFKALLFLSAGS+I + + QD+R MGGL +P T L
Sbjct: 332 IGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMML 391
Query: 202 IGLLSLVGAPFFSGFYSKD 220
IG S++G P+ +GFYSKD
Sbjct: 392 IGSFSIMGLPYLTGFYSKD 410
|
Length = 669 |
| >gnl|CDD|214453 MTH00196, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 1e-53
Identities = 121/315 (38%), Positives = 173/315 (54%), Gaps = 22/315 (6%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG + +IS +N LS+YL +EL +L+L +LIA + + +S+EA +KYF+LG LSSG L+
Sbjct: 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLF 62
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVY 707
G ++L G TG L L I V+ SV LLIIV L FKL ++PFHMW PDVY
Sbjct: 63 GCALLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVY 122
Query: 708 QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQ 767
+GA T LL+ PKL +F I+ + L +N ILLI +FSL +G + A+ Q
Sbjct: 123 EGAPTKTTALLAIVPKLGIFSILVS------IGLNVN---ILLIGGLFSLFVGAIGALNQ 173
Query: 768 YNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827
KR++AYS I HMG +L+ I + F S + L Y+ YI + F +I+
Sbjct: 174 TKIKRLLAYSGIGHMGFVLWGI--------EIGSFESIQASLVYLFIYIIMSICVFSIIL 225
Query: 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
L + + F GL +R P A+ + + S+AG PP +GF K+ I Q
Sbjct: 226 ALNVY----KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQ 281
Query: 888 KIWLLLLIIMCSLIG 902
+ LL + CS+I
Sbjct: 282 YYLIFLLAVFCSVIA 296
|
Length = 365 |
| >gnl|CDD|214436 MTH00151, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 3e-53
Identities = 112/325 (34%), Positives = 161/325 (49%), Gaps = 21/325 (6%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+ AM KSAQ P +WLP +M PTP SAL+H++T+VTAG+F++ R P S+ S +
Sbjct: 184 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFL 243
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKA 164
LFI +T G+ +ND+K+IIA STLSQLG M LG+ ++++FHL THA FKA
Sbjct: 244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKA 303
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKI 224
LLFL AGSII + QDIR +G L+ +P+T I LSL GAPF SGFYSKD +
Sbjct: 304 LLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKD-LIL 362
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYM-----SAFLILSGL 279
+ L + L + LTA + + + K + ++ L L
Sbjct: 363 ESSLMSPTSLLMV-LLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPML 421
Query: 280 IIGAFCALDGMLFYIFFE------------ATLIPIFIIIGTWGGSNRSYAAIKFFLYTL 327
++ + G L FE LI I++G + +
Sbjct: 422 LLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK 481
Query: 328 MGSLLMLISMIYLYYISNKSFNILS 352
+ SM +L +S++ LS
Sbjct: 482 LSF--FFSSMWFLSPLSSQPLKSLS 504
|
Length = 565 |
| >gnl|CDD|214444 MTH00165, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 3e-53
Identities = 141/431 (32%), Positives = 205/431 (47%), Gaps = 71/431 (16%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S NL + LGW+ +G+ SY L+ +Y + A + L NRIG
Sbjct: 103 ISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF 161
Query: 47 ----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
AM KSAQ P +WLP +M PTP SAL+H++T
Sbjct: 162 GSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSST 221
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
+VTAG++++ R + L S +L I +T F GL + D+K+IIA STLSQLG
Sbjct: 222 LVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLG 280
Query: 139 YMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCI 198
M L + ++ FHL+THA FKALLFL AGSII NM ++QDIR MGGL +MP+T
Sbjct: 281 LMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSS 340
Query: 199 TSLIGLLSLVGAPFFSGFYSKDK--KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIII 256
I LSL G PF SGFYSKD + + + N + F L + LT + +I
Sbjct: 341 CFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFF----LFFFSTGLTVSYSFRLI 396
Query: 257 LISLDIKKKLAEYMS----AFLILSGLIIGAFCALDG-------------MLFYIFFEAT 299
S+ L + + +L +I+ F ++ G M+ F+
Sbjct: 397 YYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKL 456
Query: 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLL--MLISMIYLYYISNK--SFNILSWHQ 355
L I++G W G S ++ + L +L L L SM ++ ++S S+ L+
Sbjct: 457 LTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGS 516
Query: 356 LSITKIEQIWL 366
LS+ +Q W
Sbjct: 517 LSLKSFDQGWS 527
|
Length = 573 |
| >gnl|CDD|177186 MTH00127, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 6e-52
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 23/365 (6%)
Query: 233 YFLGIDGLSLWFIPLTAFITLIIIL-----ISLDIKKKLAEYMSAFLILSGLIIGAFCAL 287
++ D LS + LT ++ ++IL + + + Y++ L +I AF A
Sbjct: 55 LYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGAT 114
Query: 288 DGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK 346
+ ++FY+ FEATLIP III WG + R A F YTL GSL +L++++ L
Sbjct: 115 EIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ----N 170
Query: 347 SFNILSWHQLSITKIEQIWLFITFF------IAFAIKIPIWPMHTWLPDAHVEAPTEGSV 400
S LS L ++ Q+ + +AF +K+P++ +H WLP AHVEAP GS+
Sbjct: 171 STGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSM 230
Query: 401 ILAAIMLKLGCYGLLRFSL---PIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457
+LAA++LKLG YG++R + P+ + SY F I L+L II I + Q D+K L
Sbjct: 231 VLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF----IILALWGIIMTGSICLRQTDLKSL 286
Query: 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNF 517
IAYSS++HMG V GI + T GA+I MI+H L SSA+F Y + +R +
Sbjct: 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLA 346
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAA 577
G+ ++P + ++ I SLAN +LP +GE MII S ++ LT + +A
Sbjct: 347 RGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAG 406
Query: 578 YSLCL 582
YSL +
Sbjct: 407 YSLYM 411
|
Length = 459 |
| >gnl|CDD|176990 CHL00049, ndhB, NADH dehydrogenase subunit 2 | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 2e-51
Identities = 115/331 (34%), Positives = 187/331 (56%), Gaps = 19/331 (5%)
Query: 560 FNFCIGVLTSTALIFSAAYSLC----LSKNIIFVL----GQMIMISGNNLLSIYLGLELM 611
F F I + ++ + S Y C +++ ++FVL G M + N+L++I++ LE +
Sbjct: 84 FQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECL 143
Query: 612 SLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT-GTLELQSIFN-VI 669
SL +L K ++ S+EA +KY ++G SS ++YG S LYG++ G +ELQ I N +I
Sbjct: 144 SLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLI 203
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI 729
N ++++L+ I VG+ FKL ++PFH W PDVY+G+ + LS T K++ +
Sbjct: 204 NTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASAL 263
Query: 730 IYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI 789
R+ W +L ILAI S+I+GN+ AITQ + KRM+AYSSI +G ++ I
Sbjct: 264 ATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
Query: 790 ISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQR 849
I ++ + S + Y++ YIF LG F I+L T TD + + GL+ +
Sbjct: 324 IVGDSN-------DGYASMITYMLFYIFMNLGTFACIVLFGLRT--GTDNIRDYAGLYTK 374
Query: 850 NPWCALIMMIFMFSLAGFPPTIGFYAKFFIF 880
+P+ AL + + + SL G PP GF+ K ++F
Sbjct: 375 DPFLALSLALCLLSLGGIPPLAGFFGKLYLF 405
|
Length = 494 |
| >gnl|CDD|201180 pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I), various chains | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 3e-49
Identities = 104/265 (39%), Positives = 144/265 (54%), Gaps = 47/265 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
SNNL ++LGWE++G+ SYLLIGFW P ++ A+LK FL +G
Sbjct: 1 SNNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLT 60
Query: 47 ----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
+ KS QFP H WLPD+MEGP P S+LI A T
Sbjct: 61 GSLSFTLLFLFGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLILATT 120
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
+ AG++++ R+S LF SN I+L +G ++ L + Q DIK+++AYS++S +G
Sbjct: 121 LKKAGLYLLLRLSNLFSSSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSSISHMG 180
Query: 139 YMTVG---LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
+M +G LG +I HL++H FF ALLFL AG II ++D+RN GGL+ MPI
Sbjct: 181 FMLIGILSLGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRS-GSRDLRNYGGLFNSMPI 239
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKD 220
+ L+ LLSL G P GF SK
Sbjct: 240 LALLLLLLLLSLSGLPPLLGFISKF 264
|
This family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. Length = 270 |
| >gnl|CDD|235044 PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 1e-48
Identities = 105/314 (33%), Positives = 175/314 (55%), Gaps = 15/314 (4%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG M + L+ I++ LE +S+ +L K + S+EAA+KY ++G SS LYG
Sbjct: 121 LGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYG 180
Query: 650 ISILYGIT-GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
S+LYG++ G+ +L +I + L LAL+L+ +I G++FK+ PFH W PDVY+
Sbjct: 181 SSLLYGLSGGSTQLSAI--ALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPDVYE 238
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G+ + LS K + F + RLL+ W+ + LAI S+++GNV A+ Q
Sbjct: 239 GSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQT 298
Query: 769 NFKRMIAYSSIAHMG-LMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827
+ KRM+AYSSI G +M+ + + + +++ FY++ Y+F LGAF +I
Sbjct: 299 SMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMV---------FYLLAYLFMNLGAFACVI 349
Query: 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
L T TD++ + GL+Q++P L + + + SL G PP GF+ K ++F ++
Sbjct: 350 LFSLRT--GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAG 407
Query: 888 KIWLLLLIIMCSLI 901
L+L+ ++ S+I
Sbjct: 408 LYLLVLVGLVTSVI 421
|
Length = 513 |
| >gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 1e-47
Identities = 119/354 (33%), Positives = 196/354 (55%), Gaps = 33/354 (9%)
Query: 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLG 607
I + +II+ ++ T + ++ L +I LG ++++S N LSIYL
Sbjct: 70 ISKIIIIIGSISILLMGSGETILSEGGQSSPIL----ILIVALGSLLLVSSINWLSIYLA 125
Query: 608 LELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFN 667
+EL +LTL +L+A ++++ +S+EA +KYF+LG +SSG L+G ++LYG+TG +Q I N
Sbjct: 126 IELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI-N 184
Query: 668 VIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLF 727
I ++ +LI + L FKL +PFHMW PDVY+GA I T LL+T PK+ +F
Sbjct: 185 SILTGDV-------GKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVF 237
Query: 728 VIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF 787
I+ + + V N ++LI A+ S+I G + A+ Q KR++AYS I HMG +LF
Sbjct: 238 SILVQ------IGPVTN---VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILF 288
Query: 788 SIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLH 847
++I + F S + L Y+I Y+ + +F +I+ LK + GL
Sbjct: 289 G-VAIGS-------FESIQASLIYMIIYVIMSICSFSIILSLK----LTKGLIVEVSGLS 336
Query: 848 QRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
++NP AL + + S+AG PP GF +K+ I + + ++ ++ S+I
Sbjct: 337 RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVI 390
|
Length = 460 |
| >gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 1e-47
Identities = 67/248 (27%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFL-- 982
A++ ARK+ ++ + + + V +KA+E++I + L +P + +
Sbjct: 9 AVELARKAGEVLREAFSNDLTVEEKTSGSNDLVTAADKAAEELILEALAALFPGHPIIGE 68
Query: 983 --IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRND 1040
++ WIIDP+D NF PQ+ +SI L + V+Y P +
Sbjct: 69 ETGAIGGTELT-DDGPTWIIDPIDGTKNFIRGIPQFAVSIGLLVNGEPVLGVVYAPALGE 127
Query: 1041 LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQI--ITKCKNL 1098
L++A KG GA+LN +++ V+ +++AL+ T F + ++ + K+ + + + +
Sbjct: 128 LYSAAKGKGAFLNGQKLPVSGAPLLSNALLVTLFGSSSVPDTSDATKLANVLSLVRAPGV 187
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD 1157
R++G+++L L VA G+ D + E G LKPW+IAAG ++ E+GG++++ G L
Sbjct: 188 RSVGSAALKLCLVAEGRADAYIEFGRLKPWDIAAGVAILREAGGVVTDLDGGPLDLLKRR 247
Query: 1158 IVAGNQKI 1165
++A N K+
Sbjct: 248 VIAANPKV 255
|
Length = 269 |
| >gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 7e-47
Identities = 78/239 (32%), Positives = 135/239 (56%), Gaps = 6/239 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A+KA R++ +I E + +K + V + A+E++I +L +P L +
Sbjct: 4 ALKAVREAGALILEAFGEELTVE-TKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGE 62
Query: 985 KSNYLTNFEN-ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
+ N + +W+IDP+D TNF P + +SIAL + + VIYDP+ ++L+
Sbjct: 63 EGGGSGNVSDGGRVWVIDPIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDELYY 122
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
A +G GA+LN K++ ++K +NDAL+ T+ S S A + ++ + +R G+
Sbjct: 123 AGRGKGAFLNGKKLPLSKDTPLNDALLSTNASML---RSNRAAVLASLVNRALGIRIYGS 179
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK-NYLYTGDIVAG 1161
+ L+LAYVA+G+LD + GL PW+ AAG+L++ E+GGI+++ GE + L I+A
Sbjct: 180 AGLDLAYVAAGRLDAYLSSGLNPWDYAAGALIVEEAGGIVTDLDGEPLDTLNRSGIIAA 238
|
This family of phosphatases is dependent on bivalent metal ions such as Mg++, and many members are inhibited by Li+ (which is thought to displace a bivalent ion in the active site). Substrates include fructose-1,6-bisphosphate, inositol poly- and monophosphates, PAP and PAPS, sedoheptulose-1,7-bisphosphate and probably others. Length = 238 |
| >gnl|CDD|237157 PRK12648, PRK12648, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 8e-47
Identities = 96/298 (32%), Positives = 147/298 (49%), Gaps = 56/298 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKP---------LAITA---------------- 35
+S NL L + WE+ ++S+LLIG+W+ + L +T
Sbjct: 125 LSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHI 184
Query: 36 ----NLKAFLINR-----------------IGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+L L +GA KSAQFP H WLP +M PTP SA +
Sbjct: 185 VGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYL 244
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AG+F++ R+ P+ + I+ G IT + Q+D+K ++AYST+
Sbjct: 245 HSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
Query: 135 SQLGYMTV--GLGVSAYTVS-IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYK 191
S LG +T+ GLG V+ IFH++ HA FKA LF++AG II + +D+R + GL +
Sbjct: 305 SHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAG-IIDHETGTRDMRRLSGLRR 363
Query: 192 YMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTA 249
MPIT +++ ++ G P +GF SK+ +F + G W +P+ A
Sbjct: 364 LMPITATLAMVAAAAMAGVPLLNGFLSKEM------FFAETLDTHLLGSLDWLLPVAA 415
|
Length = 948 |
| >gnl|CDD|177252 MTH00209, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 3e-46
Identities = 102/256 (39%), Positives = 143/256 (55%), Gaps = 40/256 (15%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG----------------- 46
NL L LGW+ +G+ SYLL+ + Y +++A + L NR+G
Sbjct: 104 NLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNW 162
Query: 47 ----------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGI 84
AM KSAQ P WLP +M PTP SAL+H++T+VTAG+
Sbjct: 163 NIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGV 222
Query: 85 FMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
+++ R P S +L +G++T + +++D+K+IIA STLSQLG M L
Sbjct: 223 YLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSL 282
Query: 145 GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGL 204
G++ ++ FHL+THA FKALLF+ AG+II + H+QDIR +G L+ MPIT I I
Sbjct: 283 GLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIAN 342
Query: 205 LSLVGAPFFSGFYSKD 220
LSL G PF +GFYSKD
Sbjct: 343 LSLCGIPFLAGFYSKD 358
|
Length = 564 |
| >gnl|CDD|164753 MTH00207, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 8e-46
Identities = 104/256 (40%), Positives = 144/256 (56%), Gaps = 43/256 (16%)
Query: 5 LFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------------------ 46
L L LGW+ +G+ S++L+ +Y P ++ A + L NRIG
Sbjct: 110 LMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWS 168
Query: 47 --------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFM 86
AM KSAQ P +WLP +M PTP SAL+H++T+VTAG+F+
Sbjct: 169 ITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFL 228
Query: 87 ITRMSPLFELSNTAL--SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
+ R P LS+T +L ++T GL + + D+K+IIA STLSQLG M L
Sbjct: 229 LIRFYPF--LSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASL 286
Query: 145 GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGL 204
G+ +++FHL+THA FKALLF+ AGS+I + H+QD+R MG L MP+T LI
Sbjct: 287 GLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIAN 346
Query: 205 LSLVGAPFFSGFYSKD 220
L+L G+PF SGFYSKD
Sbjct: 347 LALCGSPFLSGFYSKD 362
|
Length = 572 |
| >gnl|CDD|201180 pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I), various chains | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 9e-46
Identities = 97/283 (34%), Positives = 155/283 (54%), Gaps = 16/283 (5%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
NNLL +YLG EL+ L +LI + S EA++KYF+ L S F+L+GI LYG+TG
Sbjct: 2 NNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLTG 61
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL 718
+L +F +N + L L LL++V K PFH W+PD +G + +L+L
Sbjct: 62 SLSFTLLFL----FGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLIL 117
Query: 719 STTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSS 778
+TT K + ++ RL L ILLIL I S+++G++ A+ Q + K+++AYSS
Sbjct: 118 ATTLKKAGLYLLLRLS--NLFSSSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSS 175
Query: 779 IAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTD 838
I+HMG ML I+S + + ++I++ F F + L+ + + +
Sbjct: 176 ISHMGFMLIGILS--------LGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRS--GSR 225
Query: 839 ELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
+L + GL P AL++++ + SL+G PP +GF +KF I E
Sbjct: 226 DLRNYGGLFNSMPILALLLLLLLLSLSGLPPLLGFISKFLILE 268
|
This family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. Length = 270 |
| >gnl|CDD|223724 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 1e-45
Identities = 121/404 (29%), Positives = 212/404 (52%), Gaps = 13/404 (3%)
Query: 198 ITSLIGLLSLVGAPFFS--GFYSKDKKKIWIDYF--NIYYFLGIDGLSLWFIPLTAFITL 253
+ LL +G S GF + + L D LS F+ + A + L
Sbjct: 30 AKRFLALLGALGLLLLSILGFLEVGGPVGGLGGWLAPFGIVLAADPLSAIFLLIIALVGL 89
Query: 254 IIILISLDIKKKLAE---YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310
+ L S+ + E Y L+L ++GAF D Y+FFE + + ++ +
Sbjct: 90 LASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVAHY 149
Query: 311 GGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILSWHQLS-ITKIEQIWLF 367
GG R A K+ + +G+LL+LI + LY + +F ++ S + I F
Sbjct: 150 GGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAF 209
Query: 368 ITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP--DA 425
+ I F +K ++P+H WLPDAH EAP+ S +L+ +++K+G YG+LR +FP
Sbjct: 210 LLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGG 269
Query: 426 SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAI 485
+Y + NL+I L +++I++ L A++Q DIK+L+AYS+++ MG++ LG+ + T + + GAI
Sbjct: 270 AYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYILLGLGIGTPLGLAGAI 329
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+++HAL+ + +F+ G + + TR + GG+ +P +V F+I +L+ LP +
Sbjct: 330 FHLLNHALVKALLFLGAGAVLYRTGTRDLEKLGGLAKRMPLTAVAFLIGALSLAGLPPFN 389
Query: 546 GFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIF 588
GFI +F++I + K N ++ ALI A+ + +S IF
Sbjct: 390 GFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIF 433
|
Length = 504 |
| >gnl|CDD|237155 PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 1e-45
Identities = 101/283 (35%), Positives = 144/283 (50%), Gaps = 63/283 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+NL L+L WE+ ++S+LLI +WY++ + K+ LI
Sbjct: 128 LSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIM 187
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP + WLPD+ME PTP SA +
Sbjct: 188 TGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AGI+++ R +P+F S + +G IT F+ L + Q D+K I+A+ST+
Sbjct: 248 HSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
Query: 135 SQLGYMTVGLGVS----------------AYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
SQLG + LG+ A T +IFHL+ HA FK LF+ G I+ +
Sbjct: 308 SQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVG-IVDHET 366
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDK 221
+DIR +GGL MPIT +LIG LS+ G P F+GF SK+
Sbjct: 367 GTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEM 409
|
Length = 800 |
| >gnl|CDD|178168 PLN02553, PLN02553, inositol-phosphate phosphatase | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 1e-44
Identities = 85/256 (33%), Positives = 144/256 (56%), Gaps = 24/256 (9%)
Query: 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYA 980
++ A+ AA+ + II +G + +++ E K + V +KA E +I L +PS+
Sbjct: 10 FLEVAVDAAKAAGQIIRKGFYQTKHV--EHKGQVDLVTETDKACEDLIFNHLKQAFPSHK 67
Query: 981 FLIKKS---NYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI 1037
F+ +++ + T +E WI+DPLD TNF H FP C+SI L K V+Y+PI
Sbjct: 68 FIGEETTAASGGTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPI 127
Query: 1038 RNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK----------NNINSEEYAK 1087
++LFTA+KG GA+LN K I+ + ++++ AL+ T+ K N IN+
Sbjct: 128 LDELFTAVKGKGAFLNGKPIKASSQSELGKALLATEVGTKRDKATVDATTNRINA----- 182
Query: 1088 IFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNF 1146
++ K ++LR G+ +LNL VA G+LD F+E G PW++AAG++++ E+GG++ +
Sbjct: 183 ---LLYKVRSLRMSGSCALNLCGVACGRLDIFYEIGFGGPWDVAAGAVIVKEAGGLVFDP 239
Query: 1147 KGEKNYLYTGDIVAGN 1162
G + + + A N
Sbjct: 240 SGGPFDIMSRRVAASN 255
|
Length = 270 |
| >gnl|CDD|237156 PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 1e-44
Identities = 101/302 (33%), Positives = 146/302 (48%), Gaps = 64/302 (21%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMA----------- 49
+S+NL LF+ WE+ + S+LLIGF +++ A A L+A L+ G +A
Sbjct: 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNV 172
Query: 50 -----------------------------------KSAQFPLHTWLPDSMEGPTPASALI 74
KSAQFP H WLP++ME PTP SA +
Sbjct: 173 TGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYL 232
Query: 75 HAATMVTAGIFMITRMSPLFELSNTAL--SIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
H+ATMV AGI+++ R++P L T L +I+ G +T LL + Q D+K I+AYS
Sbjct: 233 HSATMVKAGIYLLARLNP--VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
Query: 133 TLSQLGYMT--VGLGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
T+S LG + +GLG A ++ L+ H+ +K LF+ AG II + +DI +GGL
Sbjct: 291 TVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAG-IIDHETGTRDITKLGGL 349
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYY-FLGIDGLSLWFIPLT 248
+ MPIT +L+ LS+ G P GF +K+ IY L SL
Sbjct: 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKEL---------IYEALLEAPLWSLILTVAA 400
Query: 249 AF 250
Sbjct: 401 VL 402
|
Length = 761 |
| >gnl|CDD|183649 PRK12649, PRK12649, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 4e-44
Identities = 103/278 (37%), Positives = 141/278 (50%), Gaps = 63/278 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S N QLF+ WE+ + S++LIG+W +P ++ K+ LI
Sbjct: 130 SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVIT 189
Query: 45 --------------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASA 72
IGA AKSAQ P + WLP++ME PTP SA
Sbjct: 190 GTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSA 249
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
+H+ATMV AG++++ R+ P+F + ++ G IT G L Q DIK I+AYS
Sbjct: 250 FLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
Query: 133 TLSQLGYMTV----------GLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQD 182
T+SQL Y+ GLGV+A T FHL+ HA FKA LFL AG I+ + +D
Sbjct: 310 TISQLAYLMTMYGYTTYHEPGLGVAAAT---FHLLNHATFKACLFLVAG-IVAHEAATRD 365
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
IR +GGL K MPIT I + I L++ G P +GF SK+
Sbjct: 366 IRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
|
Length = 789 |
| >gnl|CDD|236251 PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 4e-43
Identities = 86/329 (26%), Positives = 175/329 (53%), Gaps = 7/329 (2%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIK-KKLAEYMSAFLILSGLIIGAFCALDGMLFY 293
L D LS F+ +T+ + + +L ++ + + + FL+L ++GA D +
Sbjct: 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLF 132
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILS 352
+F E + + ++ G AA K+ + L+GS +LI + LY ++ + L+
Sbjct: 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA 192
Query: 353 WHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCY 412
+ + F+ +A A+K ++P+HTWLP A+ AP + +L+ ++ K+ Y
Sbjct: 193 GALAENPTVVTAFGFV--LLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY 250
Query: 413 GLLRFSLPIFP---DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV 469
L+R +F + L+ L+L+S++ SL A+ Q D+K+++AYS+++ MG++
Sbjct: 251 ALIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
Query: 470 TLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSV 529
LG+ +LT +++ ++ ++ HAL+ A+F++ G + TR +S G+ +P +
Sbjct: 311 LLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA 370
Query: 530 FFIIFSLANCSLPGTSGFIGEFMIILSAV 558
F + SL+ +P TSGF+ ++ +++ AV
Sbjct: 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
Length = 487 |
| >gnl|CDD|236008 PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 5e-43
Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 49/265 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRI--------------- 45
+S++LF ++ EI+ +++YLL+GFWY +PL +TA AFL R+
Sbjct: 138 LSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPL 197
Query: 46 --------------------------------GAMAKSAQFPLHTWLPDSMEGPTPASAL 73
G K AQFPLH WL ++MEGP PAS L
Sbjct: 198 AGTLNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYST 133
++ +V G +++ ++ P+ LS AL++++ IG +TA L+ I Q DIKR ++YST
Sbjct: 258 RNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYST 316
Query: 134 LSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+ LG + + +G+ +++ L+THA KALLF+S GSII+ QD+ +GGL+ M
Sbjct: 317 SAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRM 375
Query: 194 PITCITSLIGLLSLVGAPFFSGFYS 218
P T + L+G LV GF++
Sbjct: 376 PATTLAFLVGSAGLVALLPLGGFWA 400
|
Length = 613 |
| >gnl|CDD|233200 TIGR00940, 2a6301s01, Tmonovalent cation:proton antiporter | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 4e-42
Identities = 94/282 (33%), Positives = 140/282 (49%), Gaps = 63/282 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+NL L++ WE+ + S+LLI +W+ + + K+ I
Sbjct: 124 LSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKI 183
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP H WLPD+ME PTP SA +
Sbjct: 184 TGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYL 243
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AG++++ R +P+F + I+ G IT + I Q D+K I+A+ST+
Sbjct: 244 HSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTI 303
Query: 135 SQLGYMTVGLGV----------------SAYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
SQLG + V LG+ A ++FHL+ HA FK LF++AG II +
Sbjct: 304 SQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAG-IIDHET 362
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+DIR +GGL+ MPIT ++I ++ G P F+GF SK+
Sbjct: 363 GTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKE 404
|
This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter [Transport and binding proteins, Cations and iron carrying compounds]. Length = 793 |
| >gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated | Back alignment and domain information |
|---|
Score = 160 bits (408), Expect = 5e-42
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 56/270 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAM------------ 48
S+ L L L +EI G+ S+ LI + Y P A+ + LKA LI IG++
Sbjct: 131 YSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQ 189
Query: 49 -----------------------------AKSAQFPLHTWLPDSMEGPTPASALIHAATM 79
KSAQ P ++WLPD+ME PTPASA +HAA+M
Sbjct: 190 TGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASM 249
Query: 80 VTAGIFMITR----MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
V G+++ R M P+ + +++ + + F M L Q D+KR++AYST++
Sbjct: 250 VKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLP---QQDMKRLLAYSTIT 306
Query: 136 QLGYMTVGLGVS------AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
QLGYM GL ++ A SI ++ HAF K+L FL AG++ + + + + G+
Sbjct: 307 QLGYMFFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGV 365
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
K +P+ + + L++ G P F+GF+SK
Sbjct: 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSK 395
|
Length = 479 |
| >gnl|CDD|131015 TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subunit NdhF3 family | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 4e-41
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 52/275 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S++LF ++ EI+ +++YLLIGFW+ +PL +T AFL R+G
Sbjct: 138 LSDSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPL 197
Query: 47 ---------------------------------AMAKSAQFPLHTWLPDSMEGPTPASAL 73
K AQFPLH WL ++MEGP PAS L
Sbjct: 198 AGSWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYST 133
+ +V G +++ ++ P+ LS AL+ ++ IG++TA L+ I Q DIKR ++YS
Sbjct: 258 -RNSVVVATGAWVLIKLQPVLTLSPVALTALIAIGSVTAIGGSLIAIAQIDIKRALSYSV 316
Query: 134 LSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+ +G + + +G+ +++ L+THA KALLF+S GSII N QD+ +GGL+
Sbjct: 317 SAYMGLVFIAVGLGQGDLALLLLLTHAIAKALLFMSIGSIIWN-TVTQDLTELGGLWSRR 375
Query: 194 PITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDY 228
PI+ ++ ++G L+ P F++ K D
Sbjct: 376 PISGLSFVVGSAGLIAVPPLGSFWAWLK---LADG 407
|
This family represents a subfamily of NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighboring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby. Length = 606 |
| >gnl|CDD|237154 PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 6e-41
Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 47/264 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+NL L++ WE+ + S+LLIG + ++ + A L+A L+
Sbjct: 125 SDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAA 184
Query: 45 --------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
+GA++KSA P H WLP +M PTP SA +HAA
Sbjct: 185 GTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAA 244
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
MV AGI+++ R++P F +L +G T G + Q+D+K I+AY T+SQLG
Sbjct: 245 MVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLG 304
Query: 139 YMT--VGLGVSAYTVS-IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
++T VG+G ++ + L+ HA FKA LFL G II + +DIR + GL + P+
Sbjct: 305 FLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVG-IIDHSTGTRDIRKLSGLGRRQPV 363
Query: 196 TCITSLIGLLSLVGAPFFSGFYSK 219
+ + + S+ G P GF +K
Sbjct: 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
Length = 965 |
| >gnl|CDD|177157 MTH00094, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 4e-40
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 20/367 (5%)
Query: 250 FITLIIILISLDIKKKLAEYMSAFLILSGLIIGA----FCALDGMLFYIFFEATLIPIFI 305
F+ LI +++ + L+E LILS L+I F + + ++ Y+FFE ++ PI I
Sbjct: 41 FVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILI 100
Query: 306 IIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNI-LSWHQLSITKIEQI 364
+I +G I Y L + +++Y + F++ LS
Sbjct: 101 MILGYG---SQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWE----- 152
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
+F ++F +K P++ +H WLP AHVEAPT S++LA ++LKLG G LR +
Sbjct: 153 -MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL--- 208
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
++ ++N I SL+ +I S + Q D K L AYSS+ HM F+ L + ++
Sbjct: 209 -NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSG 267
Query: 485 IIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
++ M++H S+ MF IG Y+ K+RLI + F + F + L+N +P +
Sbjct: 268 LMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPS 327
Query: 545 SGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSI 604
F EF+II ++ N + S YSL L + +G+ N + +
Sbjct: 328 LSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVS--SFMGKKFSNFNNFNVGL 385
Query: 605 YLGLELM 611
L L M
Sbjct: 386 SLPLVFM 392
|
Length = 403 |
| >gnl|CDD|236251 PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 2e-39
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 9/189 (4%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-----PL 93
AF + K+A FPLHTWLP + P + + + ++ + R+
Sbjct: 204 AFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGD 263
Query: 94 FELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYT 150
F + ++ + ++ L + Q+D+KR++AYST+SQ+GY+ +GL + A
Sbjct: 264 FRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALA 323
Query: 151 VSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGA 210
+ HL+ HA K LFL+AG+I + + + + GL + MP+T + LSL+G
Sbjct: 324 AGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
Query: 211 PFFSGFYSK 219
P SGF SK
Sbjct: 383 PPTSGFVSK 391
|
Length = 487 |
| >gnl|CDD|183646 PRK12646, PRK12646, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 3e-39
Identities = 96/283 (33%), Positives = 140/283 (49%), Gaps = 64/283 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+N +++ WE+ ++S+LLI +WY+ + +++F+I
Sbjct: 128 LSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIM 187
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP H WLP +M PTP SA +
Sbjct: 188 TGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AGIF++ R +PL LSN + I+ F+G IT F + + Q D+K I+AYST+
Sbjct: 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
Query: 135 SQLGYMT--VGLG-----------VSAYTVS----IFHLMTHAFFKALLFLSAGSIIINM 177
SQLG + VG+G S Y +FHLM HA FK LF+ G II +
Sbjct: 308 SQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVG-IIDHE 366
Query: 178 KHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+DIR + G+ + P + I LS+ G PF +GF SK+
Sbjct: 367 AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
Length = 800 |
| >gnl|CDD|236332 PRK08668, PRK08668, NADH dehydrogenase subunit M; Validated | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 3e-39
Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 20/358 (5%)
Query: 223 KIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGL-II 281
K+ + + + LS +F ++ + + + K K Y + F ++S ++
Sbjct: 53 KLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVL 112
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLY 341
G F A D + YIF+E F+++ +R A++K+F+ + +G+ ML ++ +Y
Sbjct: 113 GVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRK-ASLKYFVLSAIGAYAMLYAIFLIY 171
Query: 342 YISNK-SFNILSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEAPTEGS 399
+ F +S ++ T + F +AF + K I+P+H W PDA+ EAP S
Sbjct: 172 AKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFS 231
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYY-----------FSNLIITLSLISIIYISLIA 448
+L+ + KLG YG L L + P + F+ ++ L ISII +L+A
Sbjct: 232 AVLSGQLSKLGAYGFL-LVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMA 290
Query: 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ 508
++Q DIKKLIAYSS+A+ G++ +G+ + T + G + + +HAL F+ + +
Sbjct: 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
Query: 509 MKTRLISNFGGIINVIP--HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCI 564
T IS GG+I +P I SLA +P SGF +++I + + I
Sbjct: 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLA--GIPPMSGFASKWLIFEALISKGMPI 406
|
Length = 610 |
| >gnl|CDD|237158 PRK12650, PRK12650, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 1e-38
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 56/271 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIG------------------------------------ 24
+++++ LF+ WE+V +AS+ LI
Sbjct: 128 LADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG 187
Query: 25 -----------FWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASAL 73
W +KP T A LI + A KSAQFP H WLP++M TP SA
Sbjct: 188 TTSLSGILHSDVWAEKPGLTTV--VAVLI-AVAAFTKSAQFPFHFWLPEAMAAITPVSAF 244
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFI-GAITAFFMGLLGIIQNDIKRIIAYS 132
+HAA +V AGI+++ R SP+F + +L I G ITA + + + D+K++ AYS
Sbjct: 245 LHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYS 303
Query: 133 TLSQLGYM--TVGLGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
T+SQLG++ T+G+G A T ++ H + HA FK+ LF+ G ++ + +DIR +G L
Sbjct: 304 TVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIG-VVDHQAGTRDIRRLGSL 362
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
++ MP T ++ I LS+ P GF SK+
Sbjct: 363 WRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
|
Length = 962 |
| >gnl|CDD|237167 PRK12667, PRK12667, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 1e-38
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 37/383 (9%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLII 281
W I Y +D L LTA + +I++ S + Y + L L ++
Sbjct: 70 WPAPIGIVYE--VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGML 127
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G D ++ E I + ++ + + AAIK+ L +G+ L +++ +L
Sbjct: 128 GILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFL 187
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFIT-----------------FFIAFAIKIPIWPM 383
Y +F L+ LS KI + +T AF IK I+P
Sbjct: 188 YA----TFGTLNMADLSA-KIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPN 242
Query: 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYY------FSNLIITLS 437
H WLPDAH AP+ S +L+ +++ +G Y ++RF IF + S ++I L
Sbjct: 243 HFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSPILIILG 302
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
+S I +L+ +VQ D+K+L+AYS+I+HMG++ +GI + T++ + A+ +I+HA+ S
Sbjct: 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSL 362
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F++ G + TR I G+ +P S F+I +L+ +P +GF + ++ +
Sbjct: 363 LFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNAL 422
Query: 558 VKFNFCIGVLTSTALIFSAAYSL 580
++ F + L L+ ++A SL
Sbjct: 423 LESGFYLPAL---VLLIASAISL 442
|
Length = 520 |
| >gnl|CDD|214454 MTH00198, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 8e-38
Identities = 109/320 (34%), Positives = 165/320 (51%), Gaps = 42/320 (13%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSS------EAAIKYFI 637
+I LG +++I N L+IYL LE +L L +L SQ + F S E+ +KY+I
Sbjct: 195 LIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGNTPPESGLKYWI 254
Query: 638 LGILSSGFMLYGISILYGITGTL-ELQSIFN-VIKLNNINCSVLALSLLLIIVGLSFKLG 695
LG +SSGF L+G ++ +G TG L +I + ++ NI +L L I V + FKL
Sbjct: 255 LGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLA 314
Query: 696 ISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIF 755
+PFHMW PDVY+GA T L++ PK ++++++ L+I K+LL +AI
Sbjct: 315 AAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVIT---------SKLLLSVAII 365
Query: 756 SLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITY 815
SL++G A+ Q KR++AYS I H+G +L +S T + S + Y +TY
Sbjct: 366 SLVVGAFGALNQTRIKRLLAYSGIGHIGFILIG-VSAGT-------YESLQASWTYAVTY 417
Query: 816 IFAILGAFGVIILLKN-----NTCNKTDELDIFIGLHQR----------NPWCALIMMIF 860
+ + L +F VI L+ T + D L +R P+ A + I
Sbjct: 418 LVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIV 477
Query: 861 MFSLAGFPPTIGFYAKFFIF 880
SLAG PP +GF K+FI
Sbjct: 478 FLSLAGIPPLLGFLGKWFIL 497
|
Length = 607 |
| >gnl|CDD|223724 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-35
Identities = 96/411 (23%), Positives = 182/411 (44%), Gaps = 35/411 (8%)
Query: 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTA 571
F ++ + + + F + G G++ F I+L+A + ++ +
Sbjct: 28 LKAKRFLALLGALGLLLLSILGFLEVGGPVGGLGGWLAPFGIVLAADPLSAIFLLIIALV 87
Query: 572 LIFSAAYSLCLSK-----------NIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA 620
+ ++ YS+ + ++ + G + +L ++Y+ E+M+L+ L+A
Sbjct: 88 GLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVA 147
Query: 621 SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLA 680
+ A KY ILG + + +L G+ +LY TGTL I + + ++ +
Sbjct: 148 HYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKL-SSELDPGLGI 206
Query: 681 LSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP 740
+ LL+++G K G+ P H W+PD + A ++ LLS I R+L
Sbjct: 207 AAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPL 266
Query: 741 LVIN--WQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNN 798
L W +L+ L I +++ G + A+ Q + KR++AYS+++ MG +L + I T
Sbjct: 267 LGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYILLG-LGIGTPLGL 325
Query: 799 LIIFNSCDSGLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCAL 855
+F+++ + F G ++ T +L+ GL +R P A+
Sbjct: 326 AG-------AIFHLLNHALVKALLFLGAGAVLYRT-----GTRDLEKLGGLAKRMPLTAV 373
Query: 856 IMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-----IWLLLLIIMCSLI 901
+I SLAG PP GF +KF + + +F+ I L LI++ SL
Sbjct: 374 AFLIGALSLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLA 424
|
Length = 504 |
| >gnl|CDD|236251 PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-34
Identities = 98/397 (24%), Positives = 186/397 (46%), Gaps = 45/397 (11%)
Query: 529 VFFIIFSLANCSLPGTS------GFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
F + SL L G G+ I L A + ++TS I + Y++
Sbjct: 41 TFALAISLLPQVLDGGVIAYVVGGWPPGIGIELRADSLSALFLLVTSILAIAALLYAIGY 100
Query: 583 S--KNIIFVLGQMIMISG-------NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
+ F +++++G +L ++++ LE+MSL+ L+A + + AA
Sbjct: 101 GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALAAAR 159
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
KY I+G++ S F+L G+ +LYG+TGTL + + + N + + +++ L+ K
Sbjct: 160 KYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP----TVVTAFGFVLLALALK 215
Query: 694 LGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVI--IYRLLIKCLLPLVINWQKILL 750
+ P H W+P Y A ++T LLS K++++ + IY + + +L
Sbjct: 216 AAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLA 275
Query: 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLF 810
+LA+ S+++G+++A+ Q + KR++AYS+++ MG +L + + L +GL
Sbjct: 276 VLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLAL--LTPLALA------AGLL 327
Query: 811 YIITY------IFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
+++ + +F GA V T L GL +R P A + SL
Sbjct: 328 HLLHHALMKGALFLAAGAIEVTY--------GTRRLSELSGLGRRMPLTAAAFAVASLSL 379
Query: 865 AGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
G PPT GF +K+++ E + +L +++ SL+
Sbjct: 380 IGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLL 416
|
Length = 487 |
| >gnl|CDD|223941 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 3e-34
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 15/374 (4%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + L IDGLSL L + +I L S+ F L G+
Sbjct: 60 WLPSGGLNFGLRIDGLSLLMALLVTGVGFLIHLYSIGYMSHDPGL-GRFFAYLLLFTGSM 118
Query: 285 CAL----DGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIY 339
L + +L ++F+E T + +++IG W + AA K FL T +G L +L+ +I
Sbjct: 119 LGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIIL 178
Query: 340 LYYISNKSFN---ILSWHQLS-ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
LY ++ + + + + I+ + + + K +P HTWLPDA +E P
Sbjct: 179 LYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDA-MEGP 237
Query: 396 TEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454
T S +L AA M+K G Y L R S P+F + L+I + ++ + +LIA+VQ DI
Sbjct: 238 TPVSALLHAATMVKAGVYLLARLS-PLFALSPEAL-WLVILVGAVTALLAALIALVQNDI 295
Query: 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514
K+++AYS+I+ +G++ + + L ++ + AI +++HA + +F+S G + + TR I
Sbjct: 296 KRILAYSTISQLGYMFVAL-GLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHATGTRDI 354
Query: 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIF 574
GG+ +P V F+I +LA +P +GF + MI+ +A+ + G L +
Sbjct: 355 RKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMILEAALAASHLSGGLLLLLALI 414
Query: 575 SAAYSLCLSKNIIF 588
A + S +IF
Sbjct: 415 GALLTAFYSFRLIF 428
|
Length = 606 |
| >gnl|CDD|236331 PRK08667, PRK08667, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 9e-33
Identities = 94/343 (27%), Positives = 172/343 (50%), Gaps = 29/343 (8%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDI--------KKKLAEYMSAFLILSGLIIGAFCA 286
ID L+ +FI L ++L + + SL + L ++A ILS ++G +
Sbjct: 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILS--MLGVVAS 130
Query: 287 LDGMLFYIFFE-ATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISN 345
+ F F+E L F+++ + A I +F+ T + S + L+ I + +I
Sbjct: 131 ANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQL-STVFLMLGIIVLFIQT 189
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
SF + L + +F+ F+ F IK I P H WLP AH +P+ S +++ +
Sbjct: 190 GSFEL---SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGV 246
Query: 406 MLKLGCYGLLRFSLPIF-PDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
MLK+ YGL+RF + + P+ + LI+ IS + + A+ + D+K L+AYSSI
Sbjct: 247 MLKVAVYGLVRFLMDVLSPELWWGV--LILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
Query: 465 HMGFVTLGIF-----------MLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
++G + +GI L +++ GA+ ++HAL S +F++ G + + TR
Sbjct: 305 NIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRN 364
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILS 556
I GG++ ++P+ S F++ +++ +LP +GF E ++ S
Sbjct: 365 IEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
Length = 644 |
| >gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-31
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 960 INKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCIS 1019
I+K +E II ++L + ++ + E ++DPLD N + P Y IS
Sbjct: 46 IDKVAEDIILEVLKPLGRCVNIISEELGEIVGNGPEYTVVLDPLDGTYNAINGIPFYAIS 105
Query: 1020 IALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNN 1079
IA+ + + + +Y+ D + AI G GAYLN K I+V+K +++N++ + +
Sbjct: 106 IAVFKGGKPVYGYVYNLATGDFYEAIPGKGAYLNGKPIKVSKTSELNESAVSIYGYRRGK 165
Query: 1080 INSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLII 1137
+ + + K + +R +G +L L YVASG+LD F + L+ +IAAG L+
Sbjct: 166 ERTVK------LGRKVRRVRILGAIALELCYVASGRLDAFVDVRNYLRVTDIAAGKLICE 219
Query: 1138 ESGGIISNFKG----------EKNYLYTGDIVAGNQKIFSQIISLIN 1174
E+GGI+++ G E+ L I A +++ +I+ L+
Sbjct: 220 EAGGIVTDEDGNELKLPLNVTERTNL----IAANGEELHKKILELLE 262
|
Length = 263 |
| >gnl|CDD|177158 MTH00095, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-31
Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 37/255 (14%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
SN++F + L W+++G++S+ L+ F+ + + + + L NRIG
Sbjct: 94 FSNSVFTMLLSWDLLGISSFFLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFIFS 152
Query: 47 ---------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIF 85
+ KSAQFP +WLP +M PTP S+L+H++T+VTAG+
Sbjct: 153 SYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLI 212
Query: 86 MITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLG 145
++ S L L+ + I+L IG T FF L +++ D+K+++A STLSQ+G+ + G
Sbjct: 213 LLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFG 271
Query: 146 VSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLL 205
VS HL++HA FK+ LF+ G +I + QD RN + L+ L
Sbjct: 272 SGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLF 331
Query: 206 SLVGAPFFSGFYSKD 220
L G F SG SK+
Sbjct: 332 CLCGLMFTSGMVSKE 346
|
Length = 527 |
| >gnl|CDD|237167 PRK12667, PRK12667, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-31
Identities = 68/184 (36%), Positives = 106/184 (57%), Gaps = 14/184 (7%)
Query: 48 MAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRM--------SPLFELSN 98
K+A FP H WLPD+ P+P SA++ + +V G + I R L +
Sbjct: 234 TIKAAIFPNHFWLPDAHPAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIDFRA 292
Query: 99 TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGY--MTVGLGVS-AYTVSIFH 155
I++ +GA++A L+ ++Q D+KR++AYST+S +GY M +G+G ++FH
Sbjct: 293 ALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFH 352
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
++ HA K+LLFL++G + I+ +DI + GL + MPI LIG LSLVG P +G
Sbjct: 353 IINHAIAKSLLFLASG-VFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNG 411
Query: 216 FYSK 219
F+SK
Sbjct: 412 FFSK 415
|
Length = 520 |
| >gnl|CDD|181406 PRK08377, PRK08377, NADH dehydrogenase subunit N; Validated | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 4e-31
Identities = 92/323 (28%), Positives = 163/323 (50%), Gaps = 22/323 (6%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
++ +LG MI+ ++ ++++ +E+ ++T L A K ++EA++KY +LG + S F
Sbjct: 115 LLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSF 173
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
L G++++YG TGTL + I + I+ +V + L L+I GL+ + + P + W PD
Sbjct: 174 FLIGVALIYGATGTLNMAHIAQLA--GTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPD 231
Query: 706 VYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSA 764
YQ A IT++ S K L+ + L + + K+++I+A ++ +SA
Sbjct: 232 AYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSA 291
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITY----IFAIL 820
+ Q N KRMIAYSSI +G++ + +++ T D+G+F++I + L
Sbjct: 292 LRQKNVKRMIAYSSIGQVGMIALA-LALGTQ-------AGVDAGVFHMINHAIVKALLFL 343
Query: 821 GAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIF 880
V I L E++ F GL +R P AL + I S G P F++KF I
Sbjct: 344 AVGYVGITLGGT------EIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
Query: 881 EKIFETQKIWLLLLIIMCSLIGA 903
W + L++ S++ A
Sbjct: 398 LAGLSAGYTWPVALVLGASVVEA 420
|
Length = 494 |
| >gnl|CDD|235805 PRK06458, PRK06458, hydrogenase 4 subunit F; Validated | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 2e-30
Identities = 63/194 (32%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS 426
F+ I F K+ ++PMH WLPDAH EAP+ S +L+ ++L + Y +LR+ + I
Sbjct: 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIG 276
Query: 427 YYF-SNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAI 485
F L++ L+S++ + + Q DIK+L AYSSI HMG + + + + I A+
Sbjct: 277 SDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAAL 336
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+ M++H+L SA+F + G + + TR I+ G++ V P ++ +LA +P
Sbjct: 337 LHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFG 396
Query: 546 GFIGEFMIILSAVK 559
FI EF+I+ + +
Sbjct: 397 VFISEFLILTAGLA 410
|
Length = 490 |
| >gnl|CDD|130019 TIGR00944, 2a6301s04, Multicomponent K+:H+antiporter | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 2e-30
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 21/369 (5%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLD---IKKKLAEYMSAFLILSGLIIGAFCALDGML 291
L +D S + T+ I L + L S+ ++ Y S L + GAF D
Sbjct: 70 LVLDRFSALLLCTTSIIALAVQLYSMARWGTARERHHYYSLVQFLLAGLNGAFLTGDLFN 129
Query: 292 FYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYY--------- 342
++FFE L + ++ + +K+ L+ S L +I + LY
Sbjct: 130 LFVFFEMMLAASYGLLVHGSTKIQLKEGLKYIAVNLVSSALFVIGVSLLYGVAGTLNMAD 189
Query: 343 ISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+S K L + ++ + F +K ++P+ WLP A+ P + +
Sbjct: 190 LSTKLAA-LEPRSRGLVEM----GSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVF 244
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A++ K+G Y ++R L +F A+ + ++TL++++II+ + + ++ K+ Y+
Sbjct: 245 GALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTLAMLTIIFGGIGVLAYQNMGKIAGYNV 304
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
+ +G + G+ + T + GAI ++ L A+F+ IG + T + +GG+I
Sbjct: 305 LVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKGALFLLIGLVIRGTGTATLEAYGGLIK 364
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
P F I +L+ +P SGFIG+F II F +G T L+ ++ ++
Sbjct: 365 RYPVLGWCFFICALSLAGIPPLSGFIGKFAIISGL----FDMGDWTYVTLLLLSSLAVLY 420
Query: 583 SKNIIFVLG 591
S N IF+
Sbjct: 421 SVNRIFIRT 429
|
[Transport and binding proteins, Cations and iron carrying compounds]. Length = 463 |
| >gnl|CDD|215392 PLN02737, PLN02737, inositol monophosphatase family protein | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 4e-30
Identities = 65/262 (24%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A AA+ A ++ + N+ + K + V + +KASE I +++ +P + L +
Sbjct: 83 AELAAKTGAEVVMEAVNKPRNISY--KGLTDLVTDTDKASEAAILEVVRKNFPDHLILGE 140
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIA-LKQKKQITHSVIY---DPI--R 1038
+ + + ++ +W IDPLD TNF+H +P + +S+ L + +V+ P+
Sbjct: 141 EGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGTPAAATVVEFVGGPMCWN 200
Query: 1039 NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN------NIN-SEEYAKIFQI 1091
F+A G GA+ N ++I V++ +K+ +L+ T F +++ NI +E+ +
Sbjct: 201 TRTFSASAGGGAFCNGQKIHVSQTDKVERSLLVTGFGYEHDDAWATNIELFKEFTDV--- 257
Query: 1092 ITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKN 1151
+ +R +G +++++ +VA G ++ ++E LKPW++AAG L++ E+GG ++ G K
Sbjct: 258 ---SRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGTVTRMDGGKF 314
Query: 1152 YLYTGDIVAGNQKIFSQIISLI 1173
++ ++ N + +++ I
Sbjct: 315 SVFDRSVLVSNGVLHPKLLDRI 336
|
Length = 363 |
| >gnl|CDD|235820 PRK06521, PRK06521, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 6e-30
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 23/200 (11%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELS 97
FL+ G AK+ PLH WLP + P+ SAL+ + M+ I+ I R+ F+L
Sbjct: 212 VFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALM-SGVMLKVAIYGILRVV--FDLL 268
Query: 98 NTALS----IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS------ 147
++L +GAI+A L + ++D+KR++AYST+ +G + VGLG++
Sbjct: 269 GAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAY 328
Query: 148 --------AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCIT 199
A T +++HL+ HA FK+LLFL AG+++ +D+ +GGL + MP T
Sbjct: 329 GMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWA 387
Query: 200 SLIGLLSLVGAPFFSGFYSK 219
LIG L++ P +GF S+
Sbjct: 388 FLIGCLAISALPPLNGFVSE 407
|
Length = 667 |
| >gnl|CDD|223724 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 8e-30
Identities = 94/314 (29%), Positives = 150/314 (47%), Gaps = 65/314 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
++ +LF L++ +EI+ ++SY L+ + + +A K ++ IG
Sbjct: 124 LTGDLFNLYVFFEIMTLSSYFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAA 183
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSM-EGPTPASAL 73
K+ FPLH WLPD+ E P+P SAL
Sbjct: 184 TGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSAL 243
Query: 74 IHAATMVTAGIFMITR----MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRII 129
+ +V G++ I R + PL + ++++ +G +T F L ++Q DIKR++
Sbjct: 244 LSG-VLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLL 302
Query: 130 AYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNM 186
AYST+SQ+GY+ +GLG+ +IFHL+ HA KALLFL AG+++ +D+ +
Sbjct: 303 AYSTVSQMGYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLY-RTGTRDLEKL 361
Query: 187 GGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIP 246
GGL K MP+T + LIG LSL G P F+GF SK F + L L +
Sbjct: 362 GGLAKRMPLTAVAFLIGALSLAGLPPFNGFISK---------FLLIQALFKANALLAILI 412
Query: 247 LTAFITLIIILISL 260
+ A + L+ L +
Sbjct: 413 ILAALILLASLATF 426
|
Length = 504 |
| >gnl|CDD|237168 PRK12668, PRK12668, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-29
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 30 PLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITR 89
+A A+LI IG +A PLH WLPD+ T ++ +A ++ + R
Sbjct: 177 AIAGLGGTAAWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR 235
Query: 90 MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV-SA 148
P E ++++IGA A + +++ND++R+++Y +SQ+GYM G+G+ +A
Sbjct: 236 AFPGTE-------LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTA 288
Query: 149 YTV--SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLS 206
+ ++ H H +K LLF+SAG+++ + + +GGLY+ MP+T + L+G LS
Sbjct: 289 LAINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFCLVGALS 347
Query: 207 LVGAPFFSGFYSK 219
+ P FSGF SK
Sbjct: 348 ISAFPLFSGFVSK 360
|
Length = 581 |
| >gnl|CDD|236252 PRK08376, PRK08376, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 2e-29
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 29/320 (9%)
Query: 578 YSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFI 637
Y+L L + LG + M +L + ++ LE+MS+ L+A + + + EA IKY
Sbjct: 124 YTLIL----LLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMF 179
Query: 638 LGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGIS 697
+G L+S +L GI++LYG GTL + + + N + +AL+L I GL+ K G
Sbjct: 180 VGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF--IAGLAMKSGAV 237
Query: 698 PFHMWVPDVYQGASIIITLLLSTTPKLS---LFVIIYRLLIKCLLPLVINWQKILLILAI 754
P HMW+PD Y A I+ +L + L +++ + + + W +++IL
Sbjct: 238 PVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGW--VIIILGC 295
Query: 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF----SIISIKTSHNNLIIFNSCDSGLF 810
++ +G A+ Q + KR++AY S++ +G ML + ++ + G++
Sbjct: 296 LTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIY 355
Query: 811 YIITYI------FAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
+I+ + F GA VI T L+ GL + P + +I ++
Sbjct: 356 HIVNHALYKALLFLTAGA--VIYET------GTRNLNELGGLARTMPKTTIAFLIGAAAI 407
Query: 865 AGFPPTIGFYAKFFIFEKIF 884
G PP GF +K+ I+E
Sbjct: 408 VGLPPFNGFASKWLIYESSA 427
|
Length = 521 |
| >gnl|CDD|237163 PRK12663, PRK12663, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 3e-29
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 20/355 (5%)
Query: 238 DGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAF---LILSGLIIGAFCALDGMLF-- 292
D LS + +F+ I+ + L+L +IG+F L G LF
Sbjct: 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSF--LTGDLFNL 133
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351
Y++FE LI F++I T G AIK+ + L+GS L L+ + LY +F L
Sbjct: 134 YVWFEVMLIASFVLI-TLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLY----GTFGTL 188
Query: 352 SWHQLS--ITKIEQ----IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
+ ++ + + + + F +AF +K ++P WLP A+ TE + + AA+
Sbjct: 189 NMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAAL 247
Query: 406 MLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
+ K+G Y L+R +FP L+ T++ I+++ +L A+ DI+++ Y I+
Sbjct: 248 LTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
Query: 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525
+GF+ LG+ + T I GAI ++ ++ +A+F+ G L R + GG+ P
Sbjct: 308 IGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEP 367
Query: 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
F F+I A LP SGF G+ +++ A+ I + YSL
Sbjct: 368 LFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
Length = 497 |
| >gnl|CDD|238821 cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 3e-29
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 949 EEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITN 1008
E K + V ++ E++I L +P L ++ + W+IDP+D TN
Sbjct: 26 ETKADGSLVTAADRWVEQLIRARLAAQFPDDGVLGEEGG-GIFPSSGWYWVIDPIDGTTN 84
Query: 1009 FSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDA 1068
F+ P + ISIAL + + VI P N F A KG GA+LN K + ++ ++ D
Sbjct: 85 FARGIPIWAISIALLYRGEPVFGVIALPALNQTFVAFKGGGAFLNGKPLALHPPLQLPDC 144
Query: 1069 LIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWN 1128
+G + S + ++ ++ K +R +G++SLNLA VA+G+ G+ E K W+
Sbjct: 145 NVGFNRSSR--ASARAVLRVILRRFPGK-IRMLGSASLNLASVAAGQTLGYVEATPKIWD 201
Query: 1129 IAAGSLLIIESGGIISNFKGEKNYLYTGD 1157
IAA +++ E+GG + E +L T D
Sbjct: 202 IAAAWVILREAGGSWTILDEEPAFLQTKD 230
|
These enzymes may dephosphorylate inositol monophosphate or similar substrates. Length = 242 |
| >gnl|CDD|181537 PRK08676, PRK08676, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 8e-29
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 8/303 (2%)
Query: 263 KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKF 322
+ L + F +L +I AF + + LF+IF E T + ++I AA+K+
Sbjct: 98 PENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKY 157
Query: 323 FLYTLMGSLLMLISMIYLYYISNKSFNI--LSWHQLS--ITKIEQIWLFITF---FIAFA 375
+ I +I+L+ ++ ++ L+W +L+ + + L +F FI F
Sbjct: 158 IFIASTAMIFAFIGLIFLFSLTRQALGTGTLNWTELAAHASLLSPSVLGASFLFIFIGFL 217
Query: 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLR-FSLPIFPDASYYFSNLII 434
K + P HTWLP A+ +AP+ S +L+ +L +G YG+LR +L A+ FSN++I
Sbjct: 218 AKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLI 277
Query: 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALI 494
L + SI + + Q ++KKLIA+SSI HMG + LGI + T +++ + M++H+L+
Sbjct: 278 GLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
Query: 495 SSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
S +F S G L+ Q ++ + + P + I+ S A +P F+ +F I+
Sbjct: 338 KSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
Query: 555 LSA 557
L
Sbjct: 398 LQL 400
|
Length = 485 |
| >gnl|CDD|237165 PRK12665, PRK12665, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 2e-28
Identities = 81/294 (27%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLF--YIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLY 325
++ +LIL + AF L G LF Y+ FE L+ ++++ T G + R A + + +
Sbjct: 113 FLPTYLILVAGVSNAF--LAGDLFNLYVGFEILLVASYVLL-TLGATAARVRAGVTYVMV 169
Query: 326 TLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIE-----QIWLFITFFIAFAIKIPI 380
+++ SLL LI I L Y + + N+ L++ E + LF +AF IK +
Sbjct: 170 SMVSSLLFLI-GIALVYAATGTLNMA---DLAVRLDELPSGTRTALFAVLLVAFGIKAAV 225
Query: 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
+P+ WLPD++ AP + + A ++ K+G Y ++R +FP L++ ++L++
Sbjct: 226 FPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG--LDTLLMVVALLT 283
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
++ L A+ Q DIK+L++++ ++H+G++ GI + T + GAI + H + + +F+
Sbjct: 284 MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFL 343
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
+G + Q + + GG+ P +V F + +L +P SGFIG+ ++
Sbjct: 344 VVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
Length = 521 |
| >gnl|CDD|183662 PRK12662, PRK12662, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 3e-28
Identities = 88/347 (25%), Positives = 176/347 (50%), Gaps = 14/347 (4%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDI------KKKLAEYMSAFLILSGLIIGAFCALD 288
L +D LS + L FI ++ +L + K+ + SAFL+ G ++G + D
Sbjct: 72 LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSND 131
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYIS---N 345
Y+F E + I ++++ AA ++ + +G+ LI + +LY I+ N
Sbjct: 132 VFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLN 191
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
L L + QI + + IK ++P H WL A+ EAP+ SV +
Sbjct: 192 MGDMFLIIQDLPTNRAIQIGVLF-IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGT 250
Query: 406 MLKLGCYGLLRFSLPIFPDASYY----FSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
K+ Y ++R +F + F+N+ + L+ ++I++ S++A++ DIK++ AYS
Sbjct: 251 STKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI+H+G++ L + + T + A+ +++H+++ SA+F+ G + T + + +
Sbjct: 311 SISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLW 370
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLT 568
+P ++ F++ SL+ +P TSGF+ ++ I+ + +K N IG++
Sbjct: 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
Length = 492 |
| >gnl|CDD|177246 MTH00200, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-28
Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 38/315 (12%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG ++ S ++ I+LGLE+ +L + L+ Q + EA KYFI+ +S +L+
Sbjct: 14 GLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLF 72
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G + +G I+ + LS LI++ L+ KLG++P H WVPDV Q
Sbjct: 73 GGLLNAWTSGQW------------GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQ 120
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G S+ L+LST KL+ F ++ + + L ILL+L + S+++G + Q
Sbjct: 121 GLSLQTGLILSTWQKLAPFALL--IQLAPALNS-----NILLLLGLLSVLVGGWGGLNQT 173
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
++++AYSSIAH+G +L + S + L Y++ Y+ L F +L
Sbjct: 174 QLRKILAYSSIAHLGWLL------------SGLVYSPNLALLYLLLYVIITLTVF---LL 218
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
L K + L NP ++++ + + SL G PP GF+ K+ I +++ +
Sbjct: 219 LNLLNSTKINSLSSSKTK---NPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGL 275
Query: 889 IWLLLLIIMCSLIGA 903
++++ SL+
Sbjct: 276 FIYATILLLGSLLSL 290
|
Length = 347 |
| >gnl|CDD|181085 PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 6e-28
Identities = 88/333 (26%), Positives = 165/333 (49%), Gaps = 19/333 (5%)
Query: 238 DGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYI 294
D + + ++ IT ++IL S + I+++ Y + L + + GAF D ++
Sbjct: 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFV 135
Query: 295 FFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLY---------YISN 345
FFE L+ +++I G + +IK+ L ++ S ++++ LY IS
Sbjct: 136 FFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISV 195
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
K + + IT + I F FA K ++P++ WLP ++ P + + A+
Sbjct: 196 KIAELSAGQTGLITVV-----AILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGAL 250
Query: 406 MLKLGCYGLLR-FSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
+ K+G Y + R F+L F + + LI+ L+L++II+ + A+ DIKK+I Y+ +
Sbjct: 251 LTKVGVYAIARTFTL-FFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMI 309
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
+G + +G+ M+T+ + GAI +I ++ +A+F+ IG + T + GG+I
Sbjct: 310 AVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRY 369
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
P F I +L+ +P SGF G+F I+
Sbjct: 370 PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
|
Length = 496 |
| >gnl|CDD|223939 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 9e-28
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 16/361 (4%)
Query: 224 IWIDYFNIYYF--LGIDGLSLWFIPLTAFITLIIILISLDIKKKL----AEYMSAFLILS 277
++I Y + +D L+L + +L +++SL ++ E+ + L +
Sbjct: 51 LFIAYRGSAFAGAFIVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFAT 110
Query: 278 GLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLIS 336
+I A + +L +I E + ++++ S RS AA+K+F+ + S +L
Sbjct: 111 LGMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYG 170
Query: 337 MIYLYYISNKSFNILSWHQLSITKIEQIWL---FITFFIAFAIKIPIWPMHTWLPDAHVE 393
+ L Y + S ++ E + L + K+ P H W PD +
Sbjct: 171 IA-LVYGATGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEG 229
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT + L+ LLR + F + + + +++ S++ + A+ Q +
Sbjct: 230 APTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTN 289
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK-TR 512
+K+L+AYSSIAHMG++ +G+ +T + ++++A +S F + L ++
Sbjct: 290 VKRLLAYSSIAHMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAE 349
Query: 513 LISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF----CIGVLT 568
IS+ G+ P + I L+ +P +GF G+F + L+AV+ I VL
Sbjct: 350 SISDLAGLSKRHPLLAALLTILMLSLAGIPPLAGFWGKFYVFLAAVQAGLWWLAVIAVLN 409
Query: 569 S 569
S
Sbjct: 410 S 410
|
Length = 475 |
| >gnl|CDD|214423 MTH00112, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-27
Identities = 88/313 (28%), Positives = 148/313 (47%), Gaps = 38/313 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG +I IS N+ L + GLE+ +L + LI S+ ++ ++EAA KYF+ +S +L+
Sbjct: 15 LGTIITISSNHWLMAWTGLEINTLAIIPLI-SKPHHPRATEAATKYFLTQAAASALILFS 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+ TG +++ +L N S L+ + L+ KLG++PFH W+P+V QG
Sbjct: 74 STTNAWNTGQ------WDITQLTN------PTSCTLLTLALAMKLGLAPFHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
++ L+LST KL+ ++ + L +LL LAI S +IG + Q
Sbjct: 122 STTTTALILSTWQKLAPLTLLL--MTSNSLN-----PTLLLTLAILSTLIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++A+SSIAH+G M I+I T L + YI F +
Sbjct: 175 LRKIMAFSSIAHLGWM----IAIITYSPKLTLLT--------FYIYILMTTPMFLTLNTT 222
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
T L + ++P +M+ + SLAG PP GF K+ I +++ +
Sbjct: 223 STKT------LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMT 276
Query: 890 WLLLLIIMCSLIG 902
++ M SL+
Sbjct: 277 PTATIMAMLSLLS 289
|
Length = 346 |
| >gnl|CDD|236252 PRK08376, PRK08376, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 4e-27
Identities = 83/283 (29%), Positives = 133/283 (46%), Gaps = 72/283 (25%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMA-------------- 49
+LF F+ EI+ +ASY L+ F D AI A +K + + +
Sbjct: 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGT 201
Query: 50 -------------------------------KSAQFPLHTWLPDSM-EGPTPASALIHAA 77
KS P+H WLPD+ P+ SA++
Sbjct: 202 LNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI 261
Query: 78 TMVTAGIFMITRMSPLFELSNTALS------IILFIGAITAFFMGLLGIIQNDIKRIIAY 131
AG++ + R+ LF + A++ +I+ +G +T F + ++Q D+KR++AY
Sbjct: 262 KQ--AGLYALARV--LFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
Query: 132 STLSQLGYMTVGLGVS---------------AYTVSIFHLMTHAFFKALLFLSAGSIIIN 176
++SQ+GYM +GLGV A I+H++ HA +KALLFL+AG++I
Sbjct: 318 HSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYE 377
Query: 177 MKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+++ +GGL + MP T I LIG ++VG P F+GF SK
Sbjct: 378 TG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASK 419
|
Length = 521 |
| >gnl|CDD|214432 MTH00144, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 6e-27
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
+ V+G ++ +S ++ L +++GLE+ + L+ +K + SE+ +KYFI+ L S
Sbjct: 11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKS-SESESVVKYFIIQSLGSSL 69
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+++G I+Y N S S+ L+++GL KLG+ PFH WVP
Sbjct: 70 LIFGSLIMY--------------------NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPS 109
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V G S + LL T K++ ++ + +L ++++ S ++G++ +
Sbjct: 110 VMAGLSWLSCFLLLTWQKVAPLFLL------SNFLDLYWLAYLLCVISVLSALVGSIGGL 163
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q + ++AYSSI+H G ML +I+ Y + YI + F
Sbjct: 164 NQTQVRALLAYSSISHTGWMLVAILH------------GSWLMWMYFLIYIVSSGFLF-- 209
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
L + +L ++ L ++ + SL G PP +GF +K + E
Sbjct: 210 -FSLWSGDSGSMKDLGSLKPSYKTG----LSIISLLLSLGGLPPFLGFCSKLLVLISSME 264
Query: 886 TQKIWLLLLIIMCSLI 901
+ + L+LL+++ SLI
Sbjct: 265 SSPLLLILLLLLGSLI 280
|
Length = 328 |
| >gnl|CDD|181406 PRK08377, PRK08377, NADH dehydrogenase subunit N; Validated | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 86/364 (23%), Positives = 173/364 (47%), Gaps = 16/364 (4%)
Query: 239 GLSLWFIPLTAFITLIIILISLDI---------KKKLAEYMSAFLILSGLIIGAFCALDG 289
G++L+ P A LII ++S + + + +Y FL+L G D
Sbjct: 71 GINLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDI 130
Query: 290 MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFN 349
++F E T I + + + A++K+ + +GS LI + L Y + + N
Sbjct: 131 FNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIG-VALIYGATGTLN 189
Query: 350 ILSWHQLSIT---KIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIM 406
+ QL+ T + Q+ L + F A++ ++P++ W PDA+ AP +V+ +A +
Sbjct: 190 MAHIAQLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFV 248
Query: 407 LKLGCYGLLRFSLPIFPDASY-YFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
+K G Y + R + + L+I ++ +++ + L A+ Q ++K++IAYSSI
Sbjct: 249 VKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQ 308
Query: 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525
+G + L + + T+ + + MI+HA++ + +F+++G++ + I F G+ +P
Sbjct: 309 VGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP 368
Query: 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-IGVLTSTALIFSAAYSLCLSK 584
++ I +L+ +P + F +F IIL+ + + L A + A Y L
Sbjct: 369 LTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
Query: 585 NIIF 588
+ F
Sbjct: 429 TMWF 432
|
Length = 494 |
| >gnl|CDD|177167 MTH00105, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 38/312 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG MI + ++ L ++GLE M++ + I +K+N S+EAA KYF+ +S ++
Sbjct: 15 LGTMITMISSHWLLAWIGLE-MNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMA 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
I I +G + + N + L+ + L+ KLG++PFH WVP+V QG
Sbjct: 74 IIINLMYSGQWTITKLTN------------PTASTLMTIALAMKLGLAPFHFWVPEVTQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ ++L T KL+ I+Y+ + P IN +LL LAI S++IG + Q
Sbjct: 122 IPLSSGMILLTWQKLAPLSILYQ-----ISPS-IN-PNLLLTLAILSILIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAHMG M +I + L + N ++ YI L F +LL
Sbjct: 175 LRKILAYSSIAHMGWM----TAILPYNPTLTLLN--------LLIYIIMTLTMF---MLL 219
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
N+ T L + P ++++ + SL G PP GF K+ I +++ + I
Sbjct: 220 MLNSSTTTLSLSH---TWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNI 276
Query: 890 WLLLLIIMCSLI 901
L L+ + +L+
Sbjct: 277 ILPTLMAITALL 288
|
Length = 347 |
| >gnl|CDD|235603 PRK05777, PRK05777, NADH:ubiquinone oxidoreductase subunit N; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (284), Expect = 5e-26
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 15/350 (4%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLD--IKKKLAEYMSAFLI-LSGLIIGAFCALDGMLFY 293
+DG +L+ L +L+ +L++ + E+ L L G+++ A D + +
Sbjct: 71 VDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMVS-ANDLLTLF 129
Query: 294 IFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILS 352
+ E +P++ + RS AAIK+F+ + S +L M LY + S +
Sbjct: 130 LGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATG-SLSFAG 188
Query: 353 WHQLSITKIEQIWLFIT----FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLK 408
+ L + + A K+ P H W PD + APT + LA K
Sbjct: 189 IAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-K 247
Query: 409 LGCYG-LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467
+ + LLR + F S + ++ +++ S++ +L A+ Q +IK+L+AYSSIAH G
Sbjct: 248 IAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAG 307
Query: 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPH 526
++ +G+ T + ++++ ++ F I L + + IS+F G+ P
Sbjct: 308 YLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPL 367
Query: 527 FSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSA 576
+ IF L+ +P T+GF G+F + +AV+ L ++ SA
Sbjct: 368 LAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGL--WWLAVIGVLNSA 415
|
Length = 476 |
| >gnl|CDD|177116 MTH00041, ND2, NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-26
Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 42/315 (13%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+LG +I+IS N+ I+LGLEL +L++ +++S + S EA IKYF++ S+ +L
Sbjct: 14 ILGTIIVISSNHWFLIWLGLELNTLSIIPILSSN-FSPRSVEATIKYFLVQAFSAAILLN 72
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G I ++G+ +IN + LS ++I + L+ KLG++P H W PDV Q
Sbjct: 73 GALIQAWLSGSW------------SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQ 120
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G + L+++T K++ +++ + I LL IL++ I S+++G + Q
Sbjct: 121 GLPFLQGLIIATWQKIAPLILL--ISISNLLN-----SNILILCGILSVLVGGWGGLNQT 173
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYII--TYIFAILGAFGVI 826
++++A+SSIAH+G + I S + + ++I+F L YII T IF I F +
Sbjct: 174 QTRKILAFSSIAHLGWI--IITSAYSPNASIIMF------LIYIIINTSIFLIGNNFSLS 225
Query: 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFET 886
L N + Q NP A + ++ + SL G PP GF KF + +
Sbjct: 226 TLSHLNKLS------------QLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQN 273
Query: 887 QKIWLLLLIIMCSLI 901
I + +++I+ SL+
Sbjct: 274 NSILISIILIIGSLL 288
|
Length = 349 |
| >gnl|CDD|236252 PRK08376, PRK08376, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 7e-26
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 28/364 (7%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLDIKKK---LAEYMSAFLILSGLIIGAFCALDGMLFY 293
+D + + ++ + +L S+ K L +Y + L+L ++G D F+
Sbjct: 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFF 147
Query: 294 IFFEATLIPIFIIIG----TWGGSNRSYAAIKFFLYTLMGSLLML--ISMIYLYYISNKS 347
+F E I + ++ TW A IK+ + S ++L I+++Y Y +
Sbjct: 148 VFLEIMSIASYALVAFRNDTWEAIE---AGIKYMFVGSLASSMVLLGIALLYGQYGTLNM 204
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML 407
+ + T + +I L + F A+K P+H WLPDA+ AP+ S +L I
Sbjct: 205 AYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQ 263
Query: 408 KLGCYGLLRFSLPIFPDA--SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
G Y L R I+ A +II L +++ +A+VQ D+K+L+AY S++
Sbjct: 264 A-GLYALARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
Query: 466 MGFVTL--GIFMLT----------KISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
+G++ L G+ + +I++ G I +++HAL + +F++ G + + TR
Sbjct: 323 IGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
++ GG+ +P ++ F+I + A LP +GF +++I S+ FN +GV+ +
Sbjct: 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSV 442
Query: 574 FSAA 577
+ A
Sbjct: 443 LTLA 446
|
Length = 521 |
| >gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV) | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 990 TNFENENIWIIDPLDNITNFSHNFPQYCISIAL--KQKKQITHSVIYDPIRNDLFTAIKG 1047
E E ++DPLD N + P Y +S+A+ K + +Y+ DL+ AIKG
Sbjct: 71 NGDEPEYTVVLDPLDGTYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAIKG 130
Query: 1048 CGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLN 1107
GAYLN KRI+V+ + + + KN+ + F+I K + +R G+ +L
Sbjct: 131 KGAYLNGKRIKVSDFSSLKSISVSYYIYGKNH------DRTFKICRKVRRVRIFGSVALE 184
Query: 1108 LAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTGDIVA 1160
L YVASG LD F + + L+ +IAAG L+ E+GGI+++ G++ N +I+A
Sbjct: 185 LCYVASGALDAFVDVRENLRLVDIAAGYLIAEEAGGIVTDENGKELKLKLNVTERVNIIA 244
Query: 1161 GNQKIFSQIISLI 1173
N ++ +++ L+
Sbjct: 245 ANSELHKKLLELL 257
|
These are Mg++ dependent phosphatases. Members in this family may have both fructose-1,6-bisphosphatase and inositol-monophosphatase activity. In hyperthermophilic archaea, inositol monophosphatase is thought to play a role in the biosynthesis of di-myo-inositol-1,1'-phosphate, an osmolyte unique to hyperthermophiles. Length = 257 |
| >gnl|CDD|236171 PRK08168, PRK08168, NADH dehydrogenase subunit L; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-25
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 47/219 (21%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
S++L L W + +A + L+ F+ D+P A A K F+ +R+
Sbjct: 119 SDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
Query: 47 ----------------------------AMA---KSAQFPLHTWLPDSMEGPTPASALIH 75
+A K+AQ P+H WL ME PTP SAL+H
Sbjct: 179 GSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLH 238
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
A +V G F++ R +PL E + A +++ +G TA GL+ + + IK +A+ST++
Sbjct: 239 AG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVA 297
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSII 174
Q+G+M + G+ Y +++ HL+ H+ +KA FLSA +
Sbjct: 298 QMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
Length = 516 |
| >gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-25
Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 52/397 (13%)
Query: 191 KYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIY----YFLGIDGLSLWFIP 246
+ + + + +LSL A FY K + + N+ + L ID +S+
Sbjct: 28 ELGVLFAALTTLCMLSLAYA-----FYQAGKVAVTLTLVNLGDVALFGLVIDPVSVLIGF 82
Query: 247 LTAFITLIIILISLDIKKKLAEYMSA-------------FLILSGLIIGAFCALD----- 288
+ + L++ L S YMS + L IGA L
Sbjct: 83 VVVLLGLLVTLYSTG-------YMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYSSTL 135
Query: 289 -GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS 347
G+L +FFE T + + +I + +A+K L T +GSL + ++ L+ + +
Sbjct: 136 LGLL--LFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIM 406
F + + L + + +F+ A K P ++WLPDA +EAPT S L AA M
Sbjct: 193 FALSALSGLHGS--LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLHAASM 249
Query: 407 LKLGCYGLLRFSL---PIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
+K+G Y R PI Y + +++++++Y L+ + Q D+K+L+AYS+I
Sbjct: 250 VKVGVYIFARAIQSMGPIPHVIGY----VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
Query: 464 AHMG--FVTLGIFML-TKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGI 520
+G F L + +L ++++++G+I + +HA S F+ G L TRL+ G+
Sbjct: 306 TQLGYMFFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGV 365
Query: 521 INVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+ +P V F + +LA +P +GF +F I +
Sbjct: 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAG 402
|
Length = 479 |
| >gnl|CDD|236332 PRK08668, PRK08668, NADH dehydrogenase subunit M; Validated | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 4e-25
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 66/281 (23%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
++N+L L++ WEI+ +S++++ K + A+LK F+++ IGA
Sbjct: 116 LANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAK 173
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSM-EGPTPASAL 73
+AK+ FPLH W PD+ E P SA+
Sbjct: 174 TGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAV 233
Query: 74 IHAATMVTAG---------IFMITRM-SPLFELSNTAL--SIILFIGAITAFFMGLLGII 121
+ + G + T++ S L I+ ++G I+ L+ I+
Sbjct: 234 LSGQ-LSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMAIL 292
Query: 122 QNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
Q DIK++IAYS+++ GY+ VGLG+ + +FH+ HA FK L FL ++I
Sbjct: 293 QEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTG 352
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
I MGGL + MP T L+ ++SL G P SGF SK
Sbjct: 353 -TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
Length = 610 |
| >gnl|CDD|181406 PRK08377, PRK08377, NADH dehydrogenase subunit N; Validated | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-25
Identities = 61/181 (33%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 46 GAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSN---TAL 101
G ++ FPL+ W PD+ + P P + + +A +V AG++ + R+ L + +N + L
Sbjct: 215 GLAVEAELFPLNAWAPDAYQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVL 273
Query: 102 SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMT 158
+++ + +T FF L + Q ++KR+IAYS++ Q+G + + L + + +FH++
Sbjct: 274 KLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMIN 333
Query: 159 HAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYS 218
HA KALLFL+ G + I + + I GL K MP+T + IG LS VG P F+ F+S
Sbjct: 334 HAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWS 392
Query: 219 K 219
K
Sbjct: 393 K 393
|
Length = 494 |
| >gnl|CDD|235820 PRK06521, PRK06521, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 7e-25
Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 15/245 (6%)
Query: 323 FLYTLM---GSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIP 379
FLY LM G+L +L++ L S S++ + ++ +F+ F K
Sbjct: 167 FLYLLMAHAGALAILLAFGLLARESG-SYDFAAMRAAHLSPFWASLVFLLALFGFGAKAG 225
Query: 380 IWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLI 439
+ P+H WLP AH AP+ S +++ +MLK+ YG+LR + +++ L++ L I
Sbjct: 226 LVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAI 285
Query: 440 SIIYISLIAMVQIDIKKLIAYSSIAHMG--FVTLGIFM---------LTKISIQGAIIQM 488
S + L A+ + D+K+L+AYS+I ++G FV LG+ M L +++ A+ +
Sbjct: 286 SAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAYGMPLLAALALTAALYHL 345
Query: 489 ISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFI 548
++HAL S +F+ G + + TR + GG+I +P + F+I LA +LP +GF+
Sbjct: 346 LNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFV 405
Query: 549 GEFMI 553
E+++
Sbjct: 406 SEWLL 410
|
Length = 667 |
| >gnl|CDD|233200 TIGR00940, 2a6301s01, Tmonovalent cation:proton antiporter | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-24
Identities = 110/397 (27%), Positives = 188/397 (47%), Gaps = 38/397 (9%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLII 281
W+ + + L +DGL+L F L I ++++L S L ++ L + + L G ++
Sbjct: 61 WVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAML 120
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G + + +L Y+F+E T I F++I W S Y A K T+ G L ML +I L
Sbjct: 121 GVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILL 180
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLPDAHVEAPT 396
I+ SF+I + S I LF T + + K +P H WLPDA +EAPT
Sbjct: 181 GKITG-SFSIDAVIA-SADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDA-MEAPT 237
Query: 397 EGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
S L +A M+K G Y L RF+ P+F +F ++ LI++++ S A+ Q D+K
Sbjct: 238 PVSAYLHSATMVKAGLYLLARFT-PVFAGTEAWFW-IVGLAGLITLLWGSYFAIFQQDLK 295
Query: 456 KLIAYSSIAHMGFVT--LGI------FMLTKISIQG-----AIIQMISHALISSAMFISI 502
++A+S+I+ +G + LG+ + I A+ +I+HA ++F++
Sbjct: 296 GILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAA 355
Query: 503 GFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI--------- 553
G + ++ TR I GG+ +++P +I S A +P +GF+ + M
Sbjct: 356 GIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHL 415
Query: 554 --ILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
V + + + A +F+ YSL + F
Sbjct: 416 VNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFF 452
|
This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter [Transport and binding proteins, Cations and iron carrying compounds]. Length = 793 |
| >gnl|CDD|183662 PRK12662, PRK12662, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-24
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 29/320 (9%)
Query: 574 FSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
F +A+ LCL G + ++ N++ +IY+ LE+ S++ VL+A ++ + AA
Sbjct: 112 FYSAFLLCLG-------GLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAF 163
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
+Y I+G + + F L GI LY ITGTL + +F +I+ N + + +L I+VGL K
Sbjct: 164 EYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTN-RAIQIGVLFIMVGLFIK 222
Query: 694 LGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVII---YRLLIKCLLPLVINWQKIL 749
+ PFH W+ Y A I++ S T+ K+ +++II Y + + + + +
Sbjct: 223 AALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVF 282
Query: 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGL 809
+ILA +++ G+V AI + KR+ AYSSI+H+G ++ + +S+ T GL
Sbjct: 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILA-VSLNTY-----------YGL 330
Query: 810 FYIITYIFA---ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
+ YI + A ++ + T L+ + L + P L ++ SL G
Sbjct: 331 AAAVAYIVNHSIVKSALFMVSGSISYHFGTTK-LEDCLNLWKSMPKITLAFVLLSLSLIG 389
Query: 867 FPPTIGFYAKFFIFEKIFET 886
PPT GF AK++I + ++
Sbjct: 390 MPPTSGFVAKWYILDAFIKS 409
|
Length = 492 |
| >gnl|CDD|177142 MTH00070, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-24
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG MI +S N+ ++GLE+ +L + L+ ++ ++ ++EAA KYF+ +S +L+
Sbjct: 15 LGTMITLSSNHWFLAWMGLEINTLAIIPLM-TKTHHPRATEAATKYFLTQASASALILFS 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+I TG + ++ L +++ + L KLGI+PFH W+P+V QG
Sbjct: 74 STINAWFTGEWTIMNMQT------------PLPTIMLTIALMMKLGIAPFHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ L+LST KL+ ++ ++ L L+I+ + S +IG + Q
Sbjct: 122 LDLTTGLILSTWQKLAPMALLIQISHLLNSNL-------LIIMGLLSTLIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAH+G M I I T +L + N ++ Y+ F +++ L
Sbjct: 175 LRKIMAYSSIAHLGWM----IIILTFSPHLTLLN--------LLIYLIMTSSMFLMLMNL 222
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
+ NK +NP +MM+ + SL G PPT GF K+ I +++ +
Sbjct: 223 NSTNINKLSS------SWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLT 276
Query: 890 WLLLLIIMCSLI 901
L L+ + +L+
Sbjct: 277 TLATLMALSALL 288
|
Length = 346 |
| >gnl|CDD|214442 MTH00160, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 86/316 (27%), Positives = 152/316 (48%), Gaps = 47/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
++G +I IS N+ ++GLE+ L+ LI+++KN SSE+++KYF++ L+S
Sbjct: 12 STLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNL-MSSESSLKYFLIQALASII 70
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+L+ I + N++ NNI+ ++ SLLL KLG +PFH W P+
Sbjct: 71 LLFSIILNM-----------LNLMLFNNISSMLINSSLLL-------KLGAAPFHFWFPE 112
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V +G S I +L T K++ +++ L+ ++I+ I S IIG + +
Sbjct: 113 VMEGLSWINCFILMTWQKIAPLILLSYLINN----------NFIIIIIILSAIIGAIGGL 162
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q + ++++AYSSI H+G ML S++ + L Y + Y +
Sbjct: 163 NQTSLRKILAYSSINHLGWMLSSMMISEN------------LWLIYFLIYSIIS---LSI 207
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
I+L ++L + ++ + + SL G PP +GF K+ I + +
Sbjct: 208 ILLFNKFNIFFLNQLFNSNNK---SKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLIS 264
Query: 886 TQKIWLLLLIIMCSLI 901
+LL ++IM SLI
Sbjct: 265 NNMFFLLFILIMSSLI 280
|
Length = 335 |
| >gnl|CDD|235835 PRK06589, PRK06589, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-24
Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 50/268 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLI-----------GFWYDKPLAITANL------------ 37
+S++LF +F+ +E++ +++ LI G+ Y K L I+A L
Sbjct: 134 LSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTK 193
Query: 38 -----------------KAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
L+ I +AK+A FP+H+WLP +M P SAL+HA +V
Sbjct: 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVV 253
Query: 81 TAGIFMITRMSP-LFELSN-----TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
G+F I ++ +F LS + ++FI ++ F+ L + ++IK+I+AYST+
Sbjct: 254 KTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
Query: 135 SQLGYMTVG---LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYK 191
SQL + L A +I HL++H+F K LF S GSI K +Q + + G K
Sbjct: 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQ-VDKLHGTSK 372
Query: 192 YMPITCITSLIGLLSLVGAPFFSGFYSK 219
P+ I LSL+G P FSGF SK
Sbjct: 373 SFPLISFIISISSLSLIGIPIFSGFISK 400
|
Length = 489 |
| >gnl|CDD|235835 PRK06589, PRK06589, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 6e-24
Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 13/366 (3%)
Query: 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLII- 281
+D+ N L ++ L L F+ L F+ + +L + + + S FL L I
Sbjct: 68 ELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTIL 127
Query: 282 -GAFCALDGMLF--YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMI 338
G AL LF ++ +E I +IG + K+ ++ +LL+ + +
Sbjct: 128 IGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAV 187
Query: 339 YLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEG 398
L Y L + + Q + + FI K I+P+H+WLP A V
Sbjct: 188 ILIY---TKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
Query: 399 SVILAAIMLKLGCYGLLRFSLPIF----PDASYYFSNLIITLSLISIIYISLIAMVQIDI 454
+++ A I++K G + + + L IF + N +I + ++SI Y SL A+ +I
Sbjct: 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNI 304
Query: 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514
KK++AYS+I+ + L F+LT ++ AI+ ++SH+ +F S+G +Y+ K +
Sbjct: 305 KKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
Query: 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA-VKFNFCIGVLTSTALI 573
G P S I SL+ +P SGFI +F+I+L+A + + ++ +I
Sbjct: 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVI 424
Query: 574 FSAAYS 579
S+ S
Sbjct: 425 ASSILS 430
|
Length = 489 |
| >gnl|CDD|235978 PRK07234, PRK07234, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-23
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 34 TANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPL 93
TA+ +AF + +G + K F WLP + P + + + +V AG+F + R +
Sbjct: 181 TADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-- 238
Query: 94 FELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSI 153
I+ G TA L +++ D+KR++A+ST+SQLG++ ++A V
Sbjct: 239 -LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI-----LAAPLVGG 292
Query: 154 FHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFF 213
+ + H K+ LFL AG + + + I M G+ K++P+T + S+ G P
Sbjct: 293 LYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLL 346
Query: 214 SGFYSKD 220
+GF SK
Sbjct: 347 AGFVSKV 353
|
Length = 470 |
| >gnl|CDD|236332 PRK08668, PRK08668, NADH dehydrogenase subunit M; Validated | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-23
Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 33/344 (9%)
Query: 551 FMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLEL 610
F +I V F+ ++ S A +++ ++ VLG + N+LL++Y+ E+
Sbjct: 74 FAMISLLVIFSVAFFMV-SEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEI 129
Query: 611 MSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670
M+ + +++ K S +A++KYF+L + + MLY I ++Y TGT + I +
Sbjct: 130 MTFSSFMMVPMGKK--ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLI 187
Query: 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVY----QGASIIITLLLSTTPKLSL 726
+ L + L L+ G++ K GI P H+W PD Y Q S +++ LS
Sbjct: 188 NDTSTGFALIVFLFLLAFGVA-KAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGF 246
Query: 727 FVIIYRLLIKCLLPLVINWQKILLILAIF------SLIIGNVSAITQYNFKRMIAYSSIA 780
+++Y L L ++ + L I S+I+G + AI Q + K++IAYSS+A
Sbjct: 247 LLVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
Query: 781 HMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGAFGVIILLKNNTCNKT 837
+ G +L + + TS GLF++ + F +I T
Sbjct: 307 NGGYILVGL-GLGTSL-------GFAGGLFHVFNHALFKGLFFLIFAAVIYR-----TGT 353
Query: 838 DELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
++ GL ++ P+ + ++ + SLAG PP GF +K+ IFE
Sbjct: 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFE 397
|
Length = 610 |
| >gnl|CDD|164587 MTH00011, ND2, NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-23
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 44/313 (14%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG ++ +S NN L +++G+EL L+ L+ S K N SEAA+KYF+ L SG +L
Sbjct: 16 TLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQ-ESEAAVKYFLAQALGSGLLLL 74
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G+++++ S +++K NI +L +SL+L KLG++P H W P V
Sbjct: 75 GMTMMW---------SFPSLLK--NITALMLLVSLML-------KLGMAPCHFWFPSVMS 116
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
S + L+LST K++ I++ +LP++ +A S + G + + Q
Sbjct: 117 SISWTLCLILSTWQKIAPLSILFFFTSHNILPMM-------TSMAAMSALAGGLGGMNQT 169
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
+ ++AYSSI HMG M + S + Y +TYI ++
Sbjct: 170 QLRPLLAYSSIGHMGWMTMISVF------------SPSMAILYFMTYIIITTPLM--LLF 215
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
N + + + ++ + I + SL G PP GF K E +
Sbjct: 216 AYLNAFSTKFN----SKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
Query: 889 IWLLLLIIMCSLI 901
I +LL++I+ SL+
Sbjct: 272 ILILLVLIVGSLM 284
|
Length = 330 |
| >gnl|CDD|235978 PRK07234, PRK07234, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 4e-23
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 30/315 (9%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFL-ILSGLIIGAFCALDGMLFY 293
L D LS +FI A +TL +I + + A L IL G + AF D + Y
Sbjct: 63 LRADALSGYFILTNALVTLAVIFYC--WESAKTRFFYAQLLILHGSVNAAFVCADLISLY 120
Query: 294 IFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILS 352
+ E I F+++ + ++R+ +++ Y+ + L LI + L Y +N +F
Sbjct: 121 VALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV-LVYQANGTFAFSG 178
Query: 353 WHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCY 412
L+ E L + +K I+ WLP H EA S +L+ +++K G +
Sbjct: 179 ---LATADPEAFALI---ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVF 232
Query: 413 GLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472
L+R +L + ++ + + + L A+++ D+K+++A+S+I+ +GF+
Sbjct: 233 PLVRCALDVPGLDL-----IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA 287
Query: 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
+ + ++H L+ S +F+ G L ++ T LIS GI IP
Sbjct: 288 PLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP-----LT 334
Query: 533 IFSLANCSLPGTSGF 547
+ S + P +GF
Sbjct: 335 MASFSIAGFPLLAGF 349
|
Length = 470 |
| >gnl|CDD|183646 PRK12646, PRK12646, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 9e-23
Identities = 104/405 (25%), Positives = 193/405 (47%), Gaps = 53/405 (13%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSA----------FL 274
W+ +I L +DGLSL F +LII LI + + +Y+S+ +L
Sbjct: 64 WMKTLDINLDLRLDGLSLMF-------SLIISLIGIAVFFYATQYLSSRKDNLPRFYFYL 116
Query: 275 ILSGL-IIGAFCALDGMLFYIFFEATLIPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLL 332
L +IG + + +L Y+F+E T + F++I W + + AI+ F+ T+ G L
Sbjct: 117 TLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
Query: 333 MLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLP 388
+L+ I LY ++ N ++ I+ LFI F + K +P H WLP
Sbjct: 177 LLVGFIMLYIMTGT--NNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 234
Query: 389 DAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
A + APT S L +A M+K G + L RF+ P+ ++ Y ++ + LI++++ S+
Sbjct: 235 RA-MAAPTPVSAYLHSATMVKAGIFLLFRFT-PLLGLSNMYIY-IVTFVGLITMLFGSIT 291
Query: 448 AMVQIDIKKLIAYSSIAHMGF----VTLG----------IFMLTKISIQGAIIQMISHAL 493
A+ Q D+K ++AYS+I+ +G V +G I + + A+ +++HA+
Sbjct: 292 ALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAI 351
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
A+F+ +G + ++ TR I G+ + P ++ I +L+ +P +GF+ + M
Sbjct: 352 FKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMF 411
Query: 554 ILSAVK----------FNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
+ + + I + A IF+ Y+L + K + +
Sbjct: 412 LDALTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFW 456
|
Length = 800 |
| >gnl|CDD|235622 PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 1e-22
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILFIGAIT 111
FPLHTWLPD+ A +++ A ++ G + + R S PLF + S+ II+ +G I
Sbjct: 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIA 287
Query: 112 AFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFL 168
+ L+ + Q DIK++IAYS++S +G++T+G+ +IF +++H A LFL
Sbjct: 288 IIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFL 347
Query: 169 SAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
G + + H +DI + GGL K MP+ L ++ +G P SGF
Sbjct: 348 LVGVLYDRL-HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
Length = 497 |
| >gnl|CDD|200147 TIGR01972, NDH_I_M, proton-translocating NADH-quinone oxidoreductase, chain M | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-22
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 8 LFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSM-EG 66
L L + G L + PL FL I K FPLHTWLPD+ E
Sbjct: 177 LGLYFLGGGTFDLLE---LLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEA 233
Query: 67 PTPASALIHAATMVTAGIFMITRMSPLF-ELSNTALSIILFIGAITAFFMGLLGIIQNDI 125
PT S ++ + + PLF + S ++ +G I + L+ + Q DI
Sbjct: 234 PTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDI 293
Query: 126 KRIIAYSTLSQLGYMTVG------LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKH 179
KR+IAYS++S +G++ +G LG+S ++F +++H A LFL G ++ H
Sbjct: 294 KRLIAYSSISHMGFVLLGIFSFNELGISG---AVFQMISHGLITAALFLLVG-VLYERAH 349
Query: 180 NQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+DI GGL MP+ ++ ++ +G P SGF
Sbjct: 350 TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex [Energy metabolism, Electron transport]. Length = 481 |
| >gnl|CDD|214413 MTH00062, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 23/335 (6%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILS-GLIIGAFCALDGMLFYIF 295
D LS + I L F+ L ++ ++ L+ FL LS I FC + +LF+ F
Sbjct: 43 FDSLSFYLILLVLFLGLYSQVMFYNL---LSGVSRFFLFLSLIFSILCFCVNNSLLFWFF 99
Query: 296 FEATLIP-IFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354
+E ++IP ++++ S R A+ F Y L+ SL +L+ ++YL ++ SFN W
Sbjct: 100 YELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNG-SFNFSDW- 157
Query: 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGL 414
+ ++ F K+P++P HTWLP H EA + S+ L+ ++KLG G+
Sbjct: 158 --GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGV 215
Query: 415 LRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIF 474
RF IF + + L S+ +I A ++D K+ +A+ S++H+ LG+F
Sbjct: 216 YRFCGFIFSGSFLGYLFLCCLFSVFFLIT----ACSELDGKRWLAFLSLSHILVPVLGLF 271
Query: 475 MLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTR----LISNFGGIINVIPHFSVF 530
+ SI + + H L + +F+ + Y +R L S G + +
Sbjct: 272 VGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLR-----V 326
Query: 531 FIIFSLAN-CSLPGTSGFIGEFMIILSAVKFNFCI 564
++FS + CS P T F E ++ S+ +
Sbjct: 327 IVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYL 361
|
Length = 417 |
| >gnl|CDD|233565 TIGR01770, NDH_I_N, proton-translocating NADH-quinone oxidoreductase, chain N | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-22
Identities = 85/377 (22%), Positives = 164/377 (43%), Gaps = 23/377 (6%)
Query: 229 FNIYYFLGIDGLSLW---FIPLTAFITLIIILISLDIKKKLA---EYMSAFLILSGLIIG 282
F + F +D SL + L+ + L +K + F +L ++
Sbjct: 60 FFGFSFFIVDNFSLIIKLILLLSTLLLFFFALSYFSKEKINKFEFYILLLFALLGIFLLV 119
Query: 283 AFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGS--LLMLISMIY 339
+ + D + Y+ E + +++ S S A +K+F+ S LL IS+IY
Sbjct: 120 S--SNDLLSIYLGLELQSLCFYVLAALKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIY 177
Query: 340 LYYISNKSFNILSWHQLSITKIEQIWLF--ITFFIAFAIKIPIWPMHTWLPDAHVEAPTE 397
+ + +F L ++ + L + + K+ P H W+PD + APT
Sbjct: 178 GF-TGSLNFEDLLLFLSNLGNDISLLLLGIVFILVGLLFKLSAVPFHMWVPDVYEGAPTP 236
Query: 398 GSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457
+ + + LLR I S + ++ +++S++ + A+ Q +K+L
Sbjct: 237 VTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLLICAVLSMLIGNFGALAQKKVKRL 296
Query: 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL--IS 515
+AYSSI+H+G++ +G+ T I+ + + +AL+S F + L ++ + IS
Sbjct: 297 LAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSIGAFGVLALLRSRKDEWIEYIS 356
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF----CIGVLTSTA 571
+F G+ P ++ +IF + +P +GF G+F + + +K I +LTS
Sbjct: 357 DFAGLFKTNPLIAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYLLAVIAILTSVI 416
Query: 572 LIFSAAYSLCLSKNIIF 588
SA Y L + K + F
Sbjct: 417 ---SAFYYLRVVKVMYF 430
|
This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone [Energy metabolism, Electron transport]. Length = 468 |
| >gnl|CDD|236310 PRK08601, PRK08601, NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 3e-22
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 47 AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILF 106
M +AQ+P WL +S PTP SA++HA +V AG M+TR SPLF + I+L
Sbjct: 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF--HDDIAQILLL 270
Query: 107 IGAITAFFMGLLG----IIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFF 162
I A L+G ++Q D KR + ST++Q+G+M V + AY+ +I HL+ H F
Sbjct: 271 I---FASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLF 327
Query: 163 KALLFLSAGSII 174
KA LFL +GS +
Sbjct: 328 KATLFLQSGSAV 339
|
Length = 509 |
| >gnl|CDD|223940 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 5e-22
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 23 IGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVT 81
I L + FL I K FPLHTWLPD+ +E PT S ++ A ++
Sbjct: 194 ILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVIL-AGILLK 252
Query: 82 AGIFMITRMS-PLFELSNTALSIILFI-GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGY 139
G + + R S PLF ++ + +L G I+ + L+ Q DIKR+IAYS++S +G+
Sbjct: 253 MGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGF 312
Query: 140 MTVG------LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+T+G LGVS ++F +++H A LFL G ++ H +DI ++GGL M
Sbjct: 313 VTLGIFSFNELGVSG---AVFQMLSHGLISAALFLLVG-VLYERTHTRDIADLGGLANKM 368
Query: 194 PITCITSLIGLLSLVGAPFFSGF 216
P ++ ++ +G P SGF
Sbjct: 369 PKLAALFMLFAMASLGLPGTSGF 391
|
Length = 497 |
| >gnl|CDD|237158 PRK12650, PRK12650, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 8e-22
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 36/330 (10%)
Query: 238 DGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCAL----DGMLFY 293
D LSL+F L I ++ + S + S +L+++ + A L D ++ +
Sbjct: 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMT-AFMAAMLLLVLADDVVVLF 136
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSW 353
+ +E + F +I G + +I+ + T G L +L ++ ++
Sbjct: 137 VAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAAVA------------IAA 183
Query: 354 HQLSITKIEQI-----W-------LFITFFIAFAI--KIPIWPMHTWLPDAHVEAPTEGS 399
Q T + I W + IA A K +P H WLP+A A T S
Sbjct: 184 TQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMA-AITPVS 242
Query: 400 VIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458
L AA ++K G Y LLRFS P+F D + + + L+I + +I+ + ++ A+ + D+KKL
Sbjct: 243 AFLHAAAVVKAGIYLLLRFS-PVFHDVAVW-NWLLIIVGMITALMGAVFAVQKTDLKKLT 300
Query: 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518
AYS+++ +G++ I + T ++ A++ ++HAL S++F+ IG + +Q TR I G
Sbjct: 301 AYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
Query: 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFI 548
+ +P V I +L+ ++P GF+
Sbjct: 361 SLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
Length = 962 |
| >gnl|CDD|237167 PRK12667, PRK12667, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-21
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 42/414 (10%)
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAA 577
+I +I +F ++S + G+ I+ +G+LT+ +
Sbjct: 41 VSLITLILSILLFIQVYSSNKPIVYLFGGWPAPIGIVYEVDLLGALLGLLTALVMFLILI 100
Query: 578 YSLC----LSKNIIFVLGQMIMISGNN-------LLSIYLGLELMSLTLCVLIASQKNNI 626
YS S + + + +G ++++ LE++S++ L+A ++
Sbjct: 101 YSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
Query: 627 FSSEAAIKYFILGILSSGFMLYGISILYGITGTLEL---------QSIFNVIKLNNINCS 677
+ EAAIKY ++G + + ++ LY GTL + S L
Sbjct: 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPL 220
Query: 678 VLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS----TTPKLSLFVIIYRL 733
L ++L L + + K I P H W+PD + A ++ +LS ++ +Y +
Sbjct: 221 ALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTI 280
Query: 734 L--IKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
L+ IL+IL S IIG + + Q + KR++AYS+I+HMG +F I
Sbjct: 281 FGISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMG-YIFMGIG 339
Query: 792 IKTSHNNLIIFNSCDSGLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQ 848
I T L + + LF+II + A F GV I T ++D GL +
Sbjct: 340 IGT---QLGL----AAALFHIINHAIAKSLLFLASGVFI-----HAAGTRDIDELAGLGR 387
Query: 849 RNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIG 902
+ P + +I SL G PP GF++K +F + E+ L++++ S I
Sbjct: 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAIS 441
|
Length = 520 |
| >gnl|CDD|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 2e-21
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 22/211 (10%)
Query: 963 ASEKIITKILFNTYPSYAFL------IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQY 1016
A+ I + L P L + W++DPLD F ++
Sbjct: 41 AANAFIVEGLAALRPDIPVLSEESADDPLR-----LGWDRFWLVDPLDGTREFIKGNGEF 95
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTD-FS 1075
++IAL + + V+Y P +L+ A++G GAY N + V+ + + S
Sbjct: 96 AVNIALVEDGRPVLGVVYAPALGELYYALRGGGAYKNGRPGAVSLQARPPPLQPLRVVAS 155
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKP-WNIAAGSL 1134
+ EE + + + + +IG SSL VA G+ D + G W+ AAG
Sbjct: 156 R--SHPDEELEALLAALGVAE-VVSIG-SSLKFCLVAEGEADIYPRLGPTMEWDTAAGDA 211
Query: 1135 LIIESGGIISNFKGE-----KNYLYTGDIVA 1160
++ +GG +S+ G + D +A
Sbjct: 212 VLRAAGGAVSDLDGSPLTYNREDFLNPDFIA 242
|
It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation). Length = 242 |
| >gnl|CDD|223941 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 3e-21
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 29/327 (8%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F + ++ +NLL +++ EL L +LI + + AA K F++ + +
Sbjct: 113 LFTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGL 172
Query: 647 LYGISILYGITG-TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
L GI +LY +TG TL + +F +I+ +L L LLL+++G K PFH W+PD
Sbjct: 173 LLGIILLYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPD 232
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
+G + + LL + T + ++ RL L L +++++ + ++ + A+
Sbjct: 233 AMEGPTPVSALLHAATMVKAGVYLLARLSP--LFALSPEALWLVILVGAVTALLAALIAL 290
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA----ILG 821
Q + KR++AYS+I+ +G M ++ + + ++ +F+++T+ F L
Sbjct: 291 VQNDIKRILAYSTISQLGYMFVAL---------GLGSLAYEAAIFHLVTHAFFKALLFLS 341
Query: 822 AFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFI 879
A VI T DI GL ++ P + +I +LAG PP GF++K I
Sbjct: 342 AGSVIH--------ATGTRDIRKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMI 393
Query: 880 FEKIFET---QKIWLLLLIIMCSLIGA 903
E LLLL ++ +L+ A
Sbjct: 394 LEAALAASHLSGGLLLLLALIGALLTA 420
|
Length = 606 |
| >gnl|CDD|183649 PRK12649, PRK12649, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 5e-21
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 27/385 (7%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLII 281
W+ + + + DGL++ + + I +II+ S + K+ L Y L+ G +I
Sbjct: 66 WLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMI 125
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G + + + +IF+E T I F++IG W S Y A K L T G L M + L
Sbjct: 126 GMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLL 185
Query: 341 YYISNKSFNILSWHQLS--ITKIEQIWLF----ITFFIAFAIKIPIWPMHTWLPDAHVEA 394
+ I+ +++I + Q S I I+ LF I FI A K P + WLP+A +EA
Sbjct: 186 HVITG-TYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEA 243
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L +A M+K G Y + R PIF +F L+ +I+++ +A Q D
Sbjct: 244 PTPVSAFLHSATMVKAGVYLVARIH-PIFSGTEAWFI-LVSGTGMITMVLAGFLAFRQTD 301
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTK----ISIQGAIIQMISHALISSAMFISIGFLYNQM 509
IK ++AYS+I+ + ++ T + + A +++HA + +F+ G + ++
Sbjct: 302 IKAILAYSTISQLAYLMTMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEA 361
Query: 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK--------FN 561
TR I GG+ +P + I +LA +P +GF+ + M ++V+ F
Sbjct: 362 ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFT 421
Query: 562 FCIGVLTSTALIFSAAYSLCLSKNI 586
I + +F+ AYS+ L I
Sbjct: 422 IIIPAVAVLGGVFTFAYSIKLIDGI 446
|
Length = 789 |
| >gnl|CDD|235805 PRK06458, PRK06458, hydrogenase 4 subunit F; Validated | Back alignment and domain information |
|---|
Score = 96.5 bits (241), Expect = 1e-20
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASA-----LIHAATMVTAGIFMITRMSP 92
AF+ IG K FP+H WLPD+ E P+P SA L++ A +++ +
Sbjct: 216 AFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAI 275
Query: 93 LFELSNTALSII-LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---A 148
+ L I L + AFF+ + Q DIKR+ AYS++ +G + LG+
Sbjct: 276 GSDFPGRLLLIFGLLSVLVAAFFL----LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLG 331
Query: 149 YTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLV 208
++ H++ H+ K+ +F ++G+++ +DI + GL K P+T ++G L++
Sbjct: 332 IFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGALAIA 390
Query: 209 GAPFFSGFYS 218
G P F F S
Sbjct: 391 GMPPFGVFIS 400
|
Length = 490 |
| >gnl|CDD|237168 PRK12668, PRK12668, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 2e-20
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 18/324 (5%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFY 293
+D LS F + + I ++ +L +K ++++A L + +GA A D + +
Sbjct: 62 LGRVDKLSRVFGLIFGIMAFIGVIYALHVKDPG-QHVAALLYVGS-ALGAVFAGDLLTLF 119
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSW 353
+F+E ++ G A ++ L ++G +L+L ++ L+Y SF +
Sbjct: 120 VFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGIL-LHYAETGSFAFGA- 177
Query: 354 HQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYG 413
++ WL I F + P+H WLPDA+ EA GSV L+A K Y
Sbjct: 178 --IAGLGGTAAWLI---LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYA 232
Query: 414 LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGI 473
L R FP L+I + +Y A+++ D+++L++Y ++ +G++ GI
Sbjct: 233 LAR----AFPGT-----ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGI 283
Query: 474 FMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533
+ T ++I GA+ +H L +F+S G + + T ++ GG+ +P ++F ++
Sbjct: 284 GIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLV 343
Query: 534 FSLANCSLPGTSGFIGEFMIILSA 557
+L+ + P SGF+ + MII +A
Sbjct: 344 GALSISAFPLFSGFVSKSMIISAA 367
|
Length = 581 |
| >gnl|CDD|181085 PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 2e-20
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS--IILFI 107
K+ FPL+ WLP S P A A + A + G++ I R LF +T+ + +IL +
Sbjct: 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILIL 281
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKA 164
+T F + + DIK+II Y+ + +G + VG+ + S +I++L+ KA
Sbjct: 282 ALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKA 341
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL G I+I + D++ MGGL K P+ I LSL G P SGFY K
Sbjct: 342 ALFLLIG-IMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGK 395
|
Length = 496 |
| >gnl|CDD|200147 TIGR01972, NDH_I_M, proton-translocating NADH-quinone oxidoreductase, chain M | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 6e-20
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 28/303 (9%)
Query: 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLY 648
G + + +L Y+ E M + + +LI N I+ AA+K+F+ + S ML
Sbjct: 118 GVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIY---AAMKFFLYTLAGSLLMLL 174
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF--KLGISPFHMWVPDV 706
I LY + G F++++L N+ + L + ++F K+ + P H W+PD
Sbjct: 175 AILGLYFLGG-----GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDA 229
Query: 707 YQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
+ A +++L+ K+ + + R + + + +L L + ++I G + A+
Sbjct: 230 HVEAPTAGSVILAGVLLKMGTYGFL-RFNLPLFPDASLYFAPVLAALGVIAIIYGALIAL 288
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFN--SCDSGLFYIITYIFAILGAF 823
Q + KR+IAYSSI+HMG +L I S FN +F +I++ F
Sbjct: 289 AQTDIKRLIAYSSISHMGFVLLGIFS----------FNELGISGAVFQMISHGLITAALF 338
Query: 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883
++ +L T ++ + GL + P A M+F + G P T GF +F I
Sbjct: 339 LLVGVLYERA--HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGS 396
Query: 884 FET 886
F+
Sbjct: 397 FKV 399
|
This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex [Energy metabolism, Electron transport]. Length = 481 |
| >gnl|CDD|181085 PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 2e-19
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 23/277 (8%)
Query: 632 AIKYFILGILSSGFMLYGISILYGITGTLELQSIFN-VIKLNNINCSVLALSLLLIIVGL 690
+IKY ++ ++SS F + ++ILY + GTL + I + +L+ ++ + +L +
Sbjct: 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVF 219
Query: 691 SFKLGISPFHMWVPDVYQGASI-IITLLLSTTPKLSLFVII--YRLLIKCLLPLVINWQK 747
+ K G+ P + W+P Y I I L + K+ ++ I + L
Sbjct: 220 ATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFT---HY 276
Query: 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDS 807
++LILA+ ++I G + A+ ++ K++I Y+ + +G++L + + S
Sbjct: 277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTES--------GMIG 328
Query: 808 GLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
++Y+I + F G++I + T +L GL +R P + I SL
Sbjct: 329 AIYYLIHDMIVKAALFLLIGIMIKI-----TGTTDLKKMGGLIKRYPVLGWMFFIAALSL 383
Query: 865 AGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
AG PP GFY KFFI E FE +++++ SL+
Sbjct: 384 AGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLL 420
|
Length = 496 |
| >gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 3e-19
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 925 AIKAARKSALIIN---RGSLELENLRFEEKKYENFVFNI-NKASEKIITKILFNTYPSYA 980
A A + I R SL + + KK + ++A+E+ + +++ +P +
Sbjct: 5 AEDLADAAGETILPFFRASLLVVD-----KKSDKTPVTEADRAAEEAMRELIAAFFPDHG 59
Query: 981 FLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRND 1040
L ++ + + E +W++DP+D +F P + IAL + VI+ P +
Sbjct: 60 ILGEEFGHNEEGDAERVWVLDPIDGTKSFIRGVPVWGTLIALVEGGMPVLGVIFQPATGE 119
Query: 1041 LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRN 1100
+ A G A+L +R+RV+ ++DA++ T + ++ E F+ + + L
Sbjct: 120 RWWAAGGGAAFLGGRRLRVSSCANLSDAVLFT--TSPYLLDDPENRPAFERLRRAARLTR 177
Query: 1101 IGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVA 1160
G VA G +D E GL PW+IAA +I E+GG +++ G K G VA
Sbjct: 178 YGGDCYAYLMVAGGAVDIVVEPGLSPWDIAALIPVIEEAGGCFTDWDG-KPAPDGGGAVA 236
Query: 1161 -GNQKIFSQIISLIN 1174
GN + + + ++N
Sbjct: 237 AGNAMLHDEALEILN 251
|
This subfamily belongs to the inositol monophosphatase family (pfam00459). The members of this family consist of no more than one per species and are found only in species in which histidine is synthesized de novo but no histidinol phosphatase can be found in either of the two described families (TIGR01261, TIGR01856). In at least one species, the member of this family is found near known histidine biosynthesis genes. The role as histidinol-phosphatase wsa first proven in Corynebacterium glutamicum [Amino acid biosynthesis, Histidine family]. Length = 251 |
| >gnl|CDD|223940 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 91.9 bits (229), Expect = 4e-19
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 600 NLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
+LL Y+ ELM + + LI K I+ AA K+F+ +L S FML LY +T
Sbjct: 131 DLLLFYVFWELMLIPMYFLIGIWGGKRRIY---AATKFFLYTLLGSLFMLLAFLYLYFLT 187
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
G+ + N+ V L L ++ + K+ + P H W+PD + A +++
Sbjct: 188 GSPTFD--ILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVI 245
Query: 718 LSTTPKLSLFVIIYRL----LIKCLLPLVIN----WQKILLILAIFSLIIGNVSAITQYN 769
L+ I+ ++ L++ LPL + + +L+ L + S+I G + A Q +
Sbjct: 246 LAG--------ILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTD 297
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGA-FGV 825
KR+IAYSSI+HMG + L IF+ + G+ + + + I A F +
Sbjct: 298 IKRLIAYSSISHMGFVT------------LGIFSFNELGVSGAVFQMLSHGLISAALFLL 345
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
+ +L T T ++ GL + P A + M+F + G P T GF +F I F+
Sbjct: 346 VGVLYERT--HTRDIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQ 403
Query: 886 TQKIWLLLLII 896
L
Sbjct: 404 VFPWVAFLAAF 414
|
Length = 497 |
| >gnl|CDD|237155 PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 4e-19
Identities = 112/367 (30%), Positives = 186/367 (50%), Gaps = 37/367 (10%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL----DIKKKLAEYMSAFLILSGLI 280
WI I + L +DGLSL F L I +++L S+ K++L + L+ G +
Sbjct: 64 WIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAM 123
Query: 281 IGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIY 339
+G + + ++ Y+F+E T I F++I W S Y A K L T+ G L ML I
Sbjct: 124 LGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFIL 183
Query: 340 LYYISNKSFNILSW-HQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLPDAHVEA 394
LY ++ SF+I I+ LFI I + K +P + WLPDA +EA
Sbjct: 184 LYIMTG-SFSIREMIANADE--IQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDA-MEA 239
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L +A M+K G Y + RF+ PIF + +F + + LI++ + SL A+ Q D
Sbjct: 240 PTPVSAYLHSATMVKAGIYLVARFT-PIFAGSQVWFW-TVTLVGLITLFWGSLNAVKQTD 297
Query: 454 IKKLIAYSSIAHMGFVT--LGI-----------FMLTKISIQGAIIQMISHALISSAMFI 500
+K ++A+S+++ +G + LGI + +I AI +I+HA ++F+
Sbjct: 298 LKGILAFSTVSQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFM 357
Query: 501 SIGFLYNQMKTRLISNFGGIINVIP-HFSVFFI-IFSLANCSLPGTSGFIGE---FMIIL 555
+G + ++ TR I GG++ ++P F++ I S+A LP +GF+ + F +L
Sbjct: 358 IVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMA--GLPPFNGFLSKEMFFESML 415
Query: 556 SAVKFNF 562
+A + N
Sbjct: 416 NATEANL 422
|
Length = 800 |
| >gnl|CDD|181206 PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 4e-19
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 26/182 (14%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSI-----ILFIG 108
PLH W+P + PA+AL M + ++T L + +L +G
Sbjct: 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILT-----LSLLGGNAPLWWGVALLVLG 252
Query: 109 AITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVS--------------IF 154
ITAF GL +++++I+R++AY TL +G + +GLG ++ ++
Sbjct: 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLY 312
Query: 155 HLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFS 214
HL+ H+ FK++LFL AGS+ H +DI +GG+ K MP+ I L+GL+++ P +
Sbjct: 313 HLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLN 371
Query: 215 GF 216
GF
Sbjct: 372 GF 373
|
Length = 593 |
| >gnl|CDD|237165 PRK12665, PRK12665, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 6e-19
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHA--ATMVT-AGIFMITRMSPLFELSNTALSIILF 106
K+A FPL WLPDS PT A A + A A ++T G++ I R L ++++
Sbjct: 222 KAAVFPLSFWLPDSY--PT-APAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMV 278
Query: 107 IGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFF 162
+ +T +G+LG I Q+DIKR+++++ +S +GYM G+ +S + +I+++ H
Sbjct: 279 VALLT-MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITV 337
Query: 163 KALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ LFL G +I + +R +GGL K P+ + + L+L G P FSGF K
Sbjct: 338 QTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
Length = 521 |
| >gnl|CDD|237156 PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 1e-18
Identities = 94/366 (25%), Positives = 185/366 (50%), Gaps = 24/366 (6%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLA--EYMSAFLILSGLIIG 282
W+ + +DGLSL F L IT I LI L L + F L +
Sbjct: 50 WVPSLGVNLSFLLDGLSLTFALL---ITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMA 106
Query: 283 AFCAL---DGML-FYIFFEATLIPIFIIIG---TWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ L D ++ ++F+E T I F++IG + R AA++ L T G L +L
Sbjct: 107 SMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARR--AALQALLVTGGGGLALLA 164
Query: 336 SMIYLYYISNKSFNILS-WHQLSITKIEQIWLFITFFI---AFAIKIPIWPMHTWLPDAH 391
+I L ++ ++++ + + ++L I + AF K +P H WLP+A
Sbjct: 165 GLILLGNVTG-TYSLSELLASGDVIREHPLYLAILLLVLGGAFT-KSAQFPFHFWLPNA- 221
Query: 392 VEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMV 450
+EAPT S L +A M+K G Y L R + P+ + + L + ++++ +L+A+
Sbjct: 222 MEAPTPVSAYLHSATMVKAGIYLLARLN-PVLGGTPLWQTILPLF-GGLTMLTGALLAVR 279
Query: 451 QIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK 510
Q D+K ++AYS+++ +G + + + + ++++I+ A++ +++H+L A+F+ G + ++
Sbjct: 280 QTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETG 339
Query: 511 TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTST 570
TR I+ GG+ +P + ++ +L+ LP GF+ + +I + ++ +LT
Sbjct: 340 TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
Query: 571 ALIFSA 576
A++ +A
Sbjct: 400 AVLGNA 405
|
Length = 761 |
| >gnl|CDD|236331 PRK08667, PRK08667, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 1e-18
Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 37/372 (9%)
Query: 551 FMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNI-IFVLGQMIMISGNNLLSIYLGLE 609
F+I++ V I L + S + LS +F+L + +++ N S E
Sbjct: 82 FIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWE 141
Query: 610 LMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669
+M+L+ L+ + + A I YF++ LS+ F++ GI +L+ TG+ EL
Sbjct: 142 IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------- 194
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI 729
+ +L+L LL+ +G K GI PFH W+P + + ++ L+S + L V
Sbjct: 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMS---GVMLKVA 251
Query: 730 IY---RLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLML 786
+Y R L+ L P + W ++L+ S ++G + A+ +++ K ++AYSSI ++G++L
Sbjct: 252 VYGLVRFLMDVLSP-ELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
Query: 787 FSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF------GVIILLKNNTCNKTDEL 840
I +IF ++ A+ + ++ L + + T
Sbjct: 311 MGI-------GLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTR 363
Query: 841 DI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFET-------QKIWL 891
+I GL + P+ + + ++ S+A PP GF ++ ++E F++ KI L
Sbjct: 364 NIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILL 423
Query: 892 LLLIIMCSLIGA 903
++ + +L A
Sbjct: 424 FSVLAIFALTSA 435
|
Length = 644 |
| >gnl|CDD|235767 PRK06277, PRK06277, hydrogenase subunit F; Validated | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 1e-18
Identities = 81/309 (26%), Positives = 156/309 (50%), Gaps = 25/309 (8%)
Query: 599 NNLLSIYLGLELMSLT-LCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
+++ ++Y+ E+ ++ + ++IAS + +AA+KY ILG ++ +L GI L T
Sbjct: 120 DDIFNLYVFFEIAAIVQVGLVIASGTEE--AYKAALKYMILGNVAGSILLLGIGFLLAST 177
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
GTL + I N + L N V+ LLL+I GL + G+ PFH D+Y A + L
Sbjct: 178 GTLNITDIHNAL-LVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSAL 236
Query: 718 LSTTPK---LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMI 774
L T K ++L ++I++L L + Q +L+ L++ +++ G V A+ Q ++KR++
Sbjct: 237 LQTFSKFVLVALMLVIFKLFGG--LSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
Query: 775 AYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF---AILGAFGVIILLKN 831
AY +I+ G + +++ T +G+F+ I ++ A+ G++
Sbjct: 295 AYHAISQGGYVAAG-LALGTPL-------GIVAGIFHAINHVIYKSALFLGAGIV----- 341
Query: 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWL 891
+ KT L GL P A +++ +++G PP GF +K + + + L
Sbjct: 342 SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPEL 401
Query: 892 LLLIIMCSL 900
+++I+ S+
Sbjct: 402 AIIMIIVSI 410
|
Length = 478 |
| >gnl|CDD|235603 PRK05777, PRK05777, NADH:ubiquinone oxidoreductase subunit N; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 2e-18
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 62/275 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFL-------------------- 41
+N+L LFLG E++ + Y L D+ ++ A +K F+
Sbjct: 122 ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAT 181
Query: 42 ----INRIGAMAKSAQ-----------------------FPLHTWLPDSMEG-PTPASAL 73
I P H W PD EG PTP +A
Sbjct: 182 GSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAF 241
Query: 74 IHAATMVTAGIFMITR-MSPLFELSNTALSIILFIGAITAFFMG-LLGIIQNDIKRIIAY 131
+ A + A ++ R + F + +L I AI + +G L + Q +IKR++AY
Sbjct: 242 LATAPKI-AAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
Query: 132 STLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQ----DIR 184
S+++ GY+ VGL Y+ +F+L+ + F F +I ++ I
Sbjct: 301 SSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF----GVISLLRRKGGEAESIS 356
Query: 185 NMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ GL K P+ I +LSL G P +GF+ K
Sbjct: 357 DFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
Length = 476 |
| >gnl|CDD|130019 TIGR00944, 2a6301s04, Multicomponent K+:H+antiporter | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 2e-18
Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 602 LSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLE 661
L ++ + L + ++ S K + + +KY + ++SS + G+S+LYG+ GTL
Sbjct: 130 LFVFFEMMLAASYGLLVHGSTKIQL---KEGLKYIAVNLVSSALFVIGVSLLYGVAGTLN 186
Query: 662 LQSIFNVI-KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASI-IITLLLS 719
+ + + L + ++ + L+ V K G+ P W+P Y I + +
Sbjct: 187 MADLSTKLAALEPRSRGLVEMGSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVFGA 246
Query: 720 TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSI 779
K+ ++ II RL + + L+ LA+ ++I G + + N ++ Y+ +
Sbjct: 247 LLTKVGIYAII-RLHLLVFGTAAGFGHEWLVTLAMLTIIFGGIGVLAYQNMGKIAGYNVL 305
Query: 780 AHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDE 839
+G++L + + ++ ++Y++ + F +I L+ T T
Sbjct: 306 VAVGVILAGV---ALGTDGMLA-----GAIYYLVHDMLTKGALFLLIGLVIRGT--GTAT 355
Query: 840 LDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCS 899
L+ + GL +R P I SLAG PP GF KF I +F+ + L+++ S
Sbjct: 356 LEAYGGLIKRYPVLGWCFFICALSLAGIPPLSGFIGKFAIISGLFDMGDWTYVTLLLLSS 415
Query: 900 LI 901
L
Sbjct: 416 LA 417
|
[Transport and binding proteins, Cations and iron carrying compounds]. Length = 463 |
| >gnl|CDD|236331 PRK08667, PRK08667, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 4e-18
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 26/236 (11%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKA--FLINRIGAMAKSAQFPLHTWLP 61
L +FL I+ + ++ G + PL +A + + FL+ +G K+ P H WLP
Sbjct: 172 QLSTVFLMLGIIVL--FIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLP 229
Query: 62 DSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALS---IILFIGAITAFFMGL 117
+ P+ SAL+ + M+ ++ + R L ++ + L +IL G+I+A +
Sbjct: 230 YAHPASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAGSISALLGVI 286
Query: 118 LGIIQNDIKRIIAYSTLSQLGYMTVGLGVS--------------AYTVSIFHLMTHAFFK 163
+ ++D+K ++AYS++ +G + +G+G+ A ++FH + HA FK
Sbjct: 287 YALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFK 346
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+LLFL+AGS++ ++I MGGL K MP T L+G +S+ P F+GF S+
Sbjct: 347 SLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
Length = 644 |
| >gnl|CDD|181537 PRK08676, PRK08676, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 6e-18
Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 29/316 (9%)
Query: 599 NNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI 656
+NL ++ EL ++ +LIA S + NI +AA+KY + + F G+ L+ +
Sbjct: 122 DNLALFWIFAELTTVFSAMLIAILSARENI---DAALKYIFIASTAMIFAFIGLIFLFSL 178
Query: 657 T------GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGA 710
T GTL + L ++ SVL S L I +G K G+ PFH W+P Y A
Sbjct: 179 TRQALGTGTLNWTELAAHASL--LSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKA 236
Query: 711 SIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+++ LLS T + ++ I+ + + +L+ L IFS+ + S ++Q N
Sbjct: 237 PSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRN 296
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA-FGVIIL 828
K++IA+SSI HMGLML I I T L +F LF+++ + G F IL
Sbjct: 297 LKKLIAFSSIEHMGLMLLG-IGIGTP---LALFWM----LFHMLAHSLVKSGLFFSAGIL 348
Query: 829 LKNNTCNKTDEL-DIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
+ ++ D + D+F + P A +++ ++ G PP F +KFFI ++
Sbjct: 349 HRQYRSDRFDRIFDVF----RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGIS 404
Query: 888 KIWLLLLIIMCSLIGA 903
+WL+L +++ L+ A
Sbjct: 405 -VWLVLAVLLLLLLAA 419
|
Length = 485 |
| >gnl|CDD|177244 MTH00197, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 7e-18
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 47/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
I G + +S +N +++G+E ++L + + SQ +I +E A+KYF+ S
Sbjct: 5 FIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSAL 63
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+L G S+ + N + LS++L+I+GL KLG PFH WVP
Sbjct: 64 LLMGGSLSF-------------------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPS 104
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V + S LL+T KL+ +I L + LLI ++ S +IG + +
Sbjct: 105 VMESLSWFNCFLLATWQKLAPLLI---------LAFNSSSFMGLLICSVLSSLIGGIGGM 155
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q N ++++AYSSI H G ML S++ S + Y + Y + F
Sbjct: 156 NQSNIRQLLAYSSIGHTGWMLMSLVY------------SPSIFMLYYLIYFVIMFMLFLF 203
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
+ ++ N+ + + + + SL G PP GF+ K+ I +
Sbjct: 204 LSKNNLSSLNQQYSNPESMSSNLVF------LGLSFLSLGGLPPLSGFFLKWLILTSLLS 257
Query: 886 TQKIWLLLLIIMCSLI 901
+ + ++I+ +
Sbjct: 258 SNISLITFMLILSTCF 273
|
Length = 323 |
| >gnl|CDD|233663 TIGR01974, NDH_I_L, proton-translocating NADH-quinone oxidoreductase, chain L | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 3e-17
Identities = 100/381 (26%), Positives = 179/381 (46%), Gaps = 47/381 (12%)
Query: 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGA 283
I + F + + L +DGLSL + + + ++ + S+ Y F L+
Sbjct: 68 ISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFT--- 124
Query: 284 FCAL------DGMLFYIFFEATLIPIFIIIGTWGGSNRSY--AAIKFFLYTLMGSLLMLI 335
F L + + + +E + +++IG W S AAIK F+ +G +L+
Sbjct: 125 FSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWY-KKPSANNAAIKAFVVNRVGDFGLLL 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFIT-----FFIAFAIKIPIWPMHTWLPDA 390
+ +++ F L++ ++ + +T FI K P+HTWLPDA
Sbjct: 184 GIFLIFW----YFGTLNFQEVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDA 239
Query: 391 HVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIF---PDASYYFSNLIITLSLISIIYISL 446
+E PT S +I AA M+ G Y + R S P+F P A Y L+ + I+ ++ +
Sbjct: 240 -MEGPTPVSALIHAATMVTAGVYLVARTS-PLFELSPTALY----LVTIIGAITALFAAT 293
Query: 447 IAMVQIDIKKLIAYSSIAHMG--FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGF 504
+A+VQ DIK+++AYS+++ +G F+ LG+ + AI +++HA + +F+ G
Sbjct: 294 VALVQNDIKRILAYSTMSQLGYMFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGS 348
Query: 505 LYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK---- 559
+ + M I GG+ +P + F+I SLA PG +GF + +I+ +A
Sbjct: 349 VIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTH 408
Query: 560 -FNFCIGVLTSTALIFSAAYS 579
F F G++ + +A YS
Sbjct: 409 SFLFVAGLIGA---FLTAFYS 426
|
This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex [Energy metabolism, Electron transport]. Length = 609 |
| >gnl|CDD|237163 PRK12663, PRK12663, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 3e-17
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 49 AKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITR-MSPLFELSNTALSIILFI 107
K+A FP WLP + P A + AA + GI+ + R + LF L +L
Sbjct: 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLAT 277
Query: 108 GAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFK 163
A +G LG + DI+RI Y +S +G++ +GL + + +IF+L+ K
Sbjct: 278 MAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVK 337
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL AG ++ + + ++ +GGLY+ P+ LI + ++ G P FSGF+ K
Sbjct: 338 TALFLIAG-SLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGK 392
|
Length = 497 |
| >gnl|CDD|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 3e-17
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 962 KASEKIITKILFNTYPSYAFLIKKSNYLTNFENEN-----IWIIDPLDNITNFSHNFPQY 1016
+A+E + +++ +P + L ++ F NE +W++DP+D +F P +
Sbjct: 40 RAAEAAMRELIAAAFPDHGILGEE------FGNEGGDAGYVWVLDPIDGTKSFIRGLPVW 93
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLN---EKRIRVNKRNKINDALI-GT 1072
IAL + VI P + + +G G +LN + +RV + +A++ T
Sbjct: 94 GTLIALLHDGRPVLGVIDQPALGERWIGARGGGTFLNGAGGRPLRVRACADLAEAVLSTT 153
Query: 1073 DFSFKNNINSEEYAKIFQIITK-CKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAA 1131
D F + F+ + + + R G A VASG++D E GLKP+++AA
Sbjct: 154 DPHF----FTPGDRAAFERLARAVRLTR-YGGDCYAYALVASGRVDLVVEAGLKPYDVAA 208
Query: 1132 GSLLIIESGGIISNFKGEKNYLYTGDIVAGNQK 1164
+I +GG+I+++ G +G +VA
Sbjct: 209 LIPIIEGAGGVITDWDGGPLTGGSGRVVAAGDA 241
|
These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates. Length = 248 |
| >gnl|CDD|181537 PRK08676, PRK08676, hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 4e-17
Identities = 65/230 (28%), Positives = 119/230 (51%), Gaps = 23/230 (10%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLFELS 97
+FL IG +AKS P HTWLP + + P+ SAL+ + T++ GI+ I R+S L S
Sbjct: 208 SFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQS 266
Query: 98 N---TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTV 151
++++ +G + + Q ++K++IA+S++ +G M +G+G+ A
Sbjct: 267 GAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFW 326
Query: 152 SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIR-NMGGLYKYMPITCITSLIGLLSLVGA 210
+FH++ H+ K+ LF SAG I++ ++ D + +++ P+ ++G +++G
Sbjct: 327 MLFHMLAHSLVKSGLFFSAG--ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGM 384
Query: 211 PFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL 260
P F F SK F I LG G+S+W + L + L++ S
Sbjct: 385 PPFPLFLSK---------FFILLQLG--GISVW-LVLAVLLLLLLAASSF 422
|
Length = 485 |
| >gnl|CDD|235622 PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 6e-17
Identities = 86/369 (23%), Positives = 158/369 (42%), Gaps = 46/369 (12%)
Query: 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMI-SGNNLLSIYL 606
I +++L+A+ + Y L +++ G +I + + +LL Y+
Sbjct: 83 ISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAAL----LWLEGGVIGVFAALDLLLFYV 138
Query: 607 GLELMSLTLCVLIAS--QKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI----TGTL 660
E M + + LI KN I+ AA K+F+ +L S ML I L + TGT
Sbjct: 139 FFEAMLIPMYFLIGVWGGKNRIY---AATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTF 195
Query: 661 ELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST 720
++ + N + V L + + K+ + P H W+PD + A ++LL+
Sbjct: 196 DIADLLN----LPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAG 251
Query: 721 TPKLSLFVIIYRL----LIKCLLPLVIN----WQKILLILAIFSLIIGNVSAITQYNFKR 772
I+ ++ L++ LPL + + I++ L + ++I G + A+ Q + K+
Sbjct: 252 --------ILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKK 303
Query: 773 MIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNN 832
+IAYSSI+HMG + I + +F +I++ + F ++ +L +
Sbjct: 304 LIAYSSISHMGFVTLGIFAGNQL--------GIQGAIFQMISHGLSSAALFLLVGVLYDR 355
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T ++ + GL + P A + F + G P T GF +F I F Q ++
Sbjct: 356 L--HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSF--QVNPVI 411
Query: 893 LLIIMCSLI 901
I LI
Sbjct: 412 AFIATTGLI 420
|
Length = 497 |
| >gnl|CDD|237163 PRK12663, PRK12663, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 6e-17
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 27/308 (8%)
Query: 601 LLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
L ++Y+ E+M + VLI ++ + AIKY +L ++ S L GI +LYG G
Sbjct: 130 LFNLYVWFEVMLIASFVLITLGQEREQL---RGAIKYVVLNLIGSWLFLLGIGLLYGTFG 186
Query: 659 TLELQSIFNVIKLNNI--NCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL 716
TL + I ++LN++ ++ ++LL ++ K + PF MW+P Y + +
Sbjct: 187 TLNMAHI--AMRLNDMGDTATLTTIALLFLLA-FGMKAALFPF-MWLPAAYHTPNTEVAA 242
Query: 717 LLSTTPKLSLFVIIYRLLIKCLLPLVIN---WQKILLILAIFSLIIGNVSAITQYNFKRM 773
L + L V IY L+ L +L +A +++IG + A+ + +R+
Sbjct: 243 LFAA---LLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRI 299
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNT 833
Y I+ +G +L + + N IF + + T +F I G+ +
Sbjct: 300 AGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMV--VKTALFLIAGSLVRL------- 350
Query: 834 CNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL 893
L GL+++ P + +I +F++ G PP GF+ K + + + LL
Sbjct: 351 -TGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLA 409
Query: 894 LIIMCSLI 901
L+++ SLI
Sbjct: 410 LMLITSLI 417
|
Length = 497 |
| >gnl|CDD|223939 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-16
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
+NNL LF+G E++ +A Y+L D + A LK F++ + +
Sbjct: 118 SANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYGIALVYGA 177
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSMEG-PTPASAL 73
K + P H W PD EG PTP +A
Sbjct: 178 TGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAF 237
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTA--LSIILFIGAITAFFMGLLGIIQNDIKRIIAY 131
+ A + A ++ R+ + I I + + Q ++KR++AY
Sbjct: 238 LSTAPKI-AAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAY 296
Query: 132 STLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGG 188
S+++ +GY+ VGL V Y +F+L+ +AF F + + I ++ G
Sbjct: 297 SSIAHMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAESISDLAG 356
Query: 189 LYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L K P+ I +LSL G P +GF+ K
Sbjct: 357 LSKRHPLLAALLTILMLSLAGIPPLAGFWGK 387
|
Length = 475 |
| >gnl|CDD|181206 PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423
IWL I F + I P+H W+P AH A + + + +++K+G G+L SL +
Sbjct: 182 IWLL--GVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGG 238
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFM-LTKISIQ 482
+A ++ ++ L +I+ L A+++ +I++L+AY ++ ++G + LG+ +T I+++
Sbjct: 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALE 298
Query: 483 ----------GAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
G + +++H+L S +F+ G ++ + R I GGI +P S+ +
Sbjct: 299 QPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
Query: 533 IFSLANCSLPGTSGFIGEFMI 553
+ +A +LP +GF GE++I
Sbjct: 359 VGLMAMAALPPLNGFAGEWVI 379
|
Length = 593 |
| >gnl|CDD|177193 MTH00135, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (203), Expect = 2e-16
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 39/290 (13%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG + + ++ L ++GLE+ +L + L+A Q ++ + EA KYF+ ++ +L+
Sbjct: 15 LGTTLTFASSHWLLAWMGLEINTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFA 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+ +TG ++Q + + L +I + L+ K+G++P H W+P+V QG
Sbjct: 74 STTNAWLTGQWDIQQMSH------------PLPTTMITLALALKIGLAPLHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ L+LST KL+ F +I + + +L+ L + S ++G + Q
Sbjct: 122 LDLTTGLILSTWQKLAPFALILQ--------IAPTNPTLLITLGLTSTLVGGWGGLNQTQ 173
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAH+G M I+ ++ S +L + ++TYI AF +
Sbjct: 174 LRKILAYSSIAHLGWM---ILVLQFS-PSLTLLA--------LLTYIIMTSSAF---LTF 218
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFI 879
K N+ K + L + P + + + SL G PP GF K+ I
Sbjct: 219 KLNSSTKINTLAT---SWTKAPALTALTPLILLSLGGLPPLTGFMPKWLI 265
|
Length = 347 |
| >gnl|CDD|237154 PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 9e-16
Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 40/339 (11%)
Query: 235 LGIDGLSLWFIPLTAFITLIII----LISL-------DIKKKLAEYMSAFLILSGLIIGA 283
LG+D L+ L A ++L+++ L+ L D + +L + + + +G + G
Sbjct: 64 LGLD-LAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLGRFAAELVAFAGAMFGL 122
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGG--SNRSYAAIKFFLYTLMGSLLMLISMIYL- 340
+ + +L Y+F+E T + F++IG + ++R AA++ L T G L ML+ +I L
Sbjct: 123 VTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRR-AALQALLVTTAGGLAMLVGIIILG 181
Query: 341 -----YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEA 394
Y +S + + +S+ + + A+ K I P H WLP A + A
Sbjct: 182 QAAGTYRLSELLADPPTGPAVSVA--------VVLILVGALSKSAIVPFHFWLPGA-MAA 232
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L AA M+K G Y + R + P F D + ++ L L +++ A+ Q D
Sbjct: 233 PTPVSAYLHAAAMVKAGIYLVARLA-PGFADVPVWRP-TVLVLGLATMLLGGWRALRQHD 290
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
+K ++AY +++ +GF+T+ + + T+ + + +++HAL +A+F+ +G + + TR
Sbjct: 291 LKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRD 350
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCS---LPGTSGFIG 549
I G+ P V ++ +LA S LP GF+
Sbjct: 351 IRKLSGLGRRQP---VLAVVAALAAASMAGLPPLLGFVA 386
|
Length = 965 |
| >gnl|CDD|235767 PRK06277, PRK06277, hydrogenase subunit F; Validated | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 9e-16
Identities = 76/330 (23%), Positives = 153/330 (46%), Gaps = 19/330 (5%)
Query: 244 FIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE-ATLIP 302
I + + I ++++ L KK Y+ L+ + A D Y+FFE A ++
Sbjct: 77 IIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQ 136
Query: 303 IFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKI 361
+ ++I + G+ +Y AA+K+ + + ++L+ + +L + + NI H +
Sbjct: 137 VGLVIAS--GTEEAYKAALKYMILGNVAGSILLLGIGFLLASTG-TLNITDIHNALLVNP 193
Query: 362 EQIWLFITFFIAFAIKIPIW-------PMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGL 414
+ + I P HT D + +A GS +L K L
Sbjct: 194 TSP----VIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFS-KFVLVAL 248
Query: 415 LRFSLPIFPDASYY--FSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472
+ +F SY+ ++I LS++++++ ++A++Q D K+L+AY +I+ G+V G
Sbjct: 249 MLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAG 308
Query: 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
+ + T + I I I+H + SA+F+ G + + KT + GG++ V+P + +
Sbjct: 309 LALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
Query: 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNF 562
LA +P +GF + M+ +A++ N
Sbjct: 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANM 398
|
Length = 478 |
| >gnl|CDD|214453 MTH00196, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 4e-15
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKS---- 347
Y+ E + +FI+I GS S A +K+F+ + S L L L +
Sbjct: 19 YLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSY 78
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML 407
N++ S + + ++ +A K+ + P H W PD + APT+ + L AI+
Sbjct: 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVP 137
Query: 408 KLGCYGLL-RFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHM 466
KLG + +L L + N+++ L S+ ++ A+ Q IK+L+AYS I HM
Sbjct: 138 KLGIFSILVSIGLNV---------NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHM 188
Query: 467 GFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPH 526
GFV GI + + SIQ +++ + + +I S SI N K LI F G+ +P
Sbjct: 189 GFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKN-LIIEFSGLSRRLPI 246
Query: 527 FSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKN 585
++ + L+ +P GF+G+++I+LS V + + I +L + + Y + + K
Sbjct: 247 LAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVK- 305
Query: 586 IIFVLGQMIMISGNNLLSI 604
I+F ++ +L
Sbjct: 306 ILFFQANSFLLISTKILKK 324
|
Length = 365 |
| >gnl|CDD|214414 MTH00063, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 4e-15
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 34/249 (13%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
++ + + WE +G+ S+ LI F YD L++ A++ + +R G
Sbjct: 94 LTGDFLSTLIFWEYLGVVSFFLILF-YDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWG 152
Query: 47 --------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSP 92
KSA FP +WL ++M PTP S+L+H++T+V AG++ + R
Sbjct: 153 GSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDY 212
Query: 93 LFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVS 152
L S + +T F G+ + +D+K+I+A ST + + + + L +S
Sbjct: 213 LLGFSW-LSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILS 271
Query: 153 IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNM--GGLYKYMPITCITSLIGLLSLVGA 210
+F L++H K LLF+ G ++ +Q + LY + + L+ L L G
Sbjct: 272 LFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGV 329
Query: 211 PFFSGFYSK 219
PF F+SK
Sbjct: 330 PFIGVFFSK 338
|
Length = 522 |
| >gnl|CDD|130019 TIGR00944, 2a6301s04, Multicomponent K+:H+antiporter | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 6e-15
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS--IILFI 107
K+ FPL WLP + P P A + A + GI+ I R+ L + ++ +
Sbjct: 219 KAGMFPLSFWLPTAYYAPPPPIAAVFGALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTL 278
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKA 164
+T F G+ + ++ +I Y+ L +G + G+ + +I++L+ K
Sbjct: 279 AMLTIIFGGIGVLAYQNMGKIAGYNVLVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKG 338
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL G ++I + GGL K P+ I LSL G P SGF K
Sbjct: 339 ALFLLIG-LVIRGTGTATLEAYGGLIKRYPVLGWCFFICALSLAGIPPLSGFIGK 392
|
[Transport and binding proteins, Cations and iron carrying compounds]. Length = 463 |
| >gnl|CDD|235978 PRK07234, PRK07234, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 7e-15
Identities = 85/423 (20%), Positives = 160/423 (37%), Gaps = 69/423 (16%)
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+ ++ I+ + R ++ I++ + ++ S+ L
Sbjct: 1 MTSLTPVWIALPFLLGFAIYLLPKLDRNLALGMAIVSAV---YALGLVASMVPLELTLLD 57
Query: 546 GF--------IGEFMIILSAVKFNFCIGVL------TSTALIFSAAYSLCLSKNIIFVLG 591
F + + I+ +A+ + V+ T ++ L S N FV
Sbjct: 58 NFGVTLRADALSGYFILTNALVT---LAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA 114
Query: 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGIS 651
+L+S+Y+ LE++S+ +L+A + + + ++Y ++ F L G
Sbjct: 115 --------DLISLYVALEVLSIATFLLVAYPRTDR-AIWVGLRYLFYSNVAMLFYLIGAV 165
Query: 652 ILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGAS 711
++Y GT L + AL I +GL K GI +W+P + A
Sbjct: 166 LVYQANGTFAFSG------LATADPEAFAL----IALGLLVKGGIFVSGLWLPLTHSEAE 215
Query: 712 IIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNF 770
++ LLS K +F L++C L V I+ I + + ++G + A+ + +
Sbjct: 216 PPVSALLSGVVVKAGVFP-----LVRCAL-DVPGLDLIVRIFGVGTALLGVLFALLEKDL 269
Query: 771 KRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830
KRM+A+S+I+ +G +L + + G Y + + F L
Sbjct: 270 KRMLAFSTISQLGFILAAPL----------------VGGLYALAHGLVKSTLF----LCA 309
Query: 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW 890
++ I L W L M FS+AGFP GF +K + + Q I
Sbjct: 310 GALPSRNFTELISQML-GIGKWIPLTMA--SFSIAGFPLLAGFVSKVLTLKNLLPWQAIA 366
Query: 891 LLL 893
L L
Sbjct: 367 LNL 369
|
Length = 470 |
| >gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 8e-15
Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 19/236 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
KAA ++ I E + L K + V + A+++II + L +P + +
Sbjct: 12 VEKAALEAGQAILEVYKE-KGLAVWTKADNSPVTAADLAAQQIILEGLRALFPDIPVVSE 70
Query: 985 KSNYLTNFENEN---IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDL 1041
+ + E + W++DPLD F + ++IAL + V+Y P L
Sbjct: 71 EEEAIDWEERLHWDRFWLVDPLDGTKEFIKRNGDFAVNIALIENGVPVLGVVYAPETGKL 130
Query: 1042 FTAIKGCGAYLN-------EKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITK 1094
+ A G GA K+I + R L+ S + +
Sbjct: 131 YYAAAGGGAKREQSDNEGLRKKIPIRVRTPPKSLLVVASRS-----HRSPETEELLAQLG 185
Query: 1095 CKNLRNIGTSSLNLAYVASGKLDGF--FEKGLKPWNIAAGSLLIIESGGIISNFKG 1148
+IG+S L VA G D + F W+ AAG ++ +GG +++ G
Sbjct: 186 FIQTVSIGSSGLKFCLVAEGAADIYPRFG-PTMEWDTAAGHAVLEAAGGHVTDLDG 240
|
Length = 276 |
| >gnl|CDD|235805 PRK06458, PRK06458, hydrogenase 4 subunit F; Validated | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 3e-14
Identities = 80/357 (22%), Positives = 164/357 (45%), Gaps = 40/357 (11%)
Query: 564 IGVLTSTALIFSAAY-------------SLCL--SKNIIFVLGQMIMISGNNLLSIYLGL 608
+G LTS ++S Y +L L +F+ ++ ++ NNL +++ +
Sbjct: 81 VGFLTS---LYSIGYMRHEVEHGELSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAI 137
Query: 609 ELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTL---ELQSI 665
E +L+ L+ S EAA KY I+ + F L+G ++Y T+ +I
Sbjct: 138 EATTLS-SALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAI 196
Query: 666 F--NVIKLN-NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TT 721
++K ++ +++ L+ + +++G K+G+ P H W+PD + A ++ LLS
Sbjct: 197 LWTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVL 256
Query: 722 PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAH 781
++L+ ++ ++ ++LLI + S+++ + Q + KR+ AYSSI H
Sbjct: 257 LNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEH 316
Query: 782 MGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF-GV-IILLKNNTCNKTDE 839
MGL+ F++ L IF + L +++ + F +L K T +
Sbjct: 317 MGLIAFAL----GIGGPLGIF----AALLHMLNHSLTKSAIFFASGNVLQKYG----TRD 364
Query: 840 LDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896
+++ GL + +P +M+ ++AG PP F ++F I + + +L++
Sbjct: 365 INVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLL 421
|
Length = 490 |
| >gnl|CDD|180945 PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase subunit M; Validated | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 4e-14
Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 54/324 (16%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSE----AAIKYFILGILSSGFML---YGIS 651
NLL +L EL + +LIA I+ E A+IK+ I +S +L GI
Sbjct: 127 QNLLLFFLFYELELIPFYLLIA-----IWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIV 181
Query: 652 ILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGAS 711
L G T ++ I N++ + + L +++G K+ + P H W+PD Y AS
Sbjct: 182 WLSGSTSF-----DYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEAS 236
Query: 712 IIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIF---SLIIGNVSAITQ 767
+ +LL KL + ++ L L P W + LAI S+I G +SAI Q
Sbjct: 237 PAVAILLGGVLAKLGTYGLLRFGL--QLFPQT--WSLVAPGLAIIGTISVIYGALSAIAQ 292
Query: 768 YNFKRMIAYSSIAHMGLMLFSI-----ISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA 822
+ KRM+AYSSI HMG +L + +S+ + +I + LF+++ + +G
Sbjct: 293 KDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVG- 351
Query: 823 FGVIILLKNNTCNKTDELDIFIGLHQRNP------WCALIMMIFMFSLAGFPPTIGFYAK 876
T +LD+ GL NP AL+++ M S AG P +GF A+
Sbjct: 352 --------------TRDLDVLNGL--MNPIRGLPLTSALLVLAGMAS-AGIPGLVGFVAE 394
Query: 877 FFIFEKIFETQKIWLLLLIIMCSL 900
F +F+ F T I LL I+ L
Sbjct: 395 FIVFQGSFSTFPIPTLLCIVASGL 418
|
Length = 501 |
| >gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 6e-14
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 50/239 (20%)
Query: 964 SEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALK 1023
SE+I K + P Y I+++DP+D N + P Y SIA+
Sbjct: 67 SEEIGFKKIGKNKPEY-----------------IFVLDPIDGTYNALKDIPIYSASIAIA 109
Query: 1024 QKKQITHSVIYDPIRN-----------------DLFTAIKGCGAYL----NEKRIRVNKR 1062
+ + +N D + A KG GAYL +K+I ++
Sbjct: 110 KIDGFDKKIKEFIGKNLTINDLEVGVVKNIATGDTYYAEKGEGAYLLKKGEKKKIEISNI 169
Query: 1063 NKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFE- 1121
+ + DA IG F++ ++++ ++ K K + +R G+ +L + YVASG LD F
Sbjct: 170 SNLKDASIGL-FAYGLSLDTLKFIKD----RKVRRIRLFGSIALEMCYVASGALDAFINV 224
Query: 1122 -KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTGDIVAGNQKIFSQIISLIN 1174
+ + +IAAG ++ E+GGII+N G+ + ++ N+ + +++ +
Sbjct: 225 NETTRLCDIAAGYVICKEAGGIITNKNGKPLNMKLDINEKTSVICSNEILHKKLVGIFG 283
|
Length = 569 |
| >gnl|CDD|235810 PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase subunit D4; Validated | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 1e-13
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 30/307 (9%)
Query: 600 NLLSIYLGLELMSLTLCVLIA---SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI 656
+LL +L EL + L +LIA Q+ AA K+ + +S GI IL
Sbjct: 128 DLLLFFLFYELELIPLYLLIAIWGGQRRGY----AATKFLLYTAIS------GILILVSF 177
Query: 657 TGTLELQSI----FNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASI 712
G + L + ++ + + S L L I+VG K+ + PFH W+PD + AS
Sbjct: 178 LGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEAST 237
Query: 713 IITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI---LLILAIFSLIIGNVSAITQYN 769
+++LL+ + L + Y LL + W + L A+ S++ G AI Q +
Sbjct: 238 PVSVLLA---GVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKD 294
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
K+M+AYSSI HMG +L + + +F GL I +F ++G ++
Sbjct: 295 MKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGL--ISALLFLLVG-----VVY 347
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
K D L + + P +M++ + + AG P +GF A+F +F F +
Sbjct: 348 KKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPV 407
Query: 890 WLLLLII 896
LL +I
Sbjct: 408 QTLLCMI 414
|
Length = 500 |
| >gnl|CDD|233200 TIGR00940, 2a6301s01, Tmonovalent cation:proton antiporter | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-13
Identities = 72/314 (22%), Positives = 143/314 (45%), Gaps = 21/314 (6%)
Query: 590 LGQMI-MISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+G M+ ++ +NL+ +Y+ EL S+ +LI+ + S A K + + ML
Sbjct: 116 MGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLG 175
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVY 707
G+ +L ITG+ + ++ + + I S L +++L+++G K PFH+W+PD
Sbjct: 176 GLILLGKITGSFSIDAV--IASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAM 233
Query: 708 QGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAIT 766
+ + + L S T K L+++ + W I+ + + +L+ G+ AI
Sbjct: 234 EAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTE---AWFWIVGLAGLITLLWGSYFAIF 290
Query: 767 QYNFKRMIAYSSIAHMGLM--LFSIISIKTSHNNLII---FNSCDSGLFYII---TYIFA 818
Q + K ++A+S+I+ +GL+ L + S + + + +F++I T+ +
Sbjct: 291 QQDLKGILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGS 350
Query: 819 ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
+ A G+I + T ++ GL P + MI ++AG PP GF +K
Sbjct: 351 LFMAAGII-----DHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEM 405
Query: 879 IFEKIFETQKIWLL 892
F + +
Sbjct: 406 FFAEAITAHLVNPF 419
|
This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter [Transport and binding proteins, Cations and iron carrying compounds]. Length = 793 |
| >gnl|CDD|235806 PRK06459, PRK06459, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 1e-13
Identities = 77/362 (21%), Positives = 149/362 (41%), Gaps = 31/362 (8%)
Query: 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALD 288
I +G+ +F ++ + ++ L S++ S +++ + + +
Sbjct: 34 LLITSIYEYNGVLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDN 93
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-S 347
+LF +E IP ++ I A F + + ++L+L + + IS +
Sbjct: 94 YLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTN 151
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMH--TWLPDAHVEAPTEGSVILAAI 405
F+ L I F IK+ + P WLP AH AP+ S IL+A
Sbjct: 152 FSYLP----------SPVPLILASFGFIIKMGMMPFLVSEWLPIAHGNAPSNFSAILSAT 201
Query: 406 MLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
M +G YG+L+ ++ YF I+ + SI++ +L A V ++K L+A+S+I +
Sbjct: 202 MTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
Query: 466 MG--FVTLGIFMLTKISIQ--------GAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
G V LG++M+TK I I+ +H++ + +F+S G Q T
Sbjct: 262 NGAILVALGLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKK 321
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
I + + + + L G + ++++ S F + + + S I +
Sbjct: 322 IRNRWI------ELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
Query: 576 AA 577
A
Sbjct: 376 GA 377
|
Length = 585 |
| >gnl|CDD|235820 PRK06521, PRK06521, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 2e-13
Identities = 73/367 (19%), Positives = 165/367 (44%), Gaps = 31/367 (8%)
Query: 555 LSAVKFNFCIGVLTSTALIFSAAY----------SLCLSKNIIFVLGQMIMISGNNLLSI 604
LSA F I +L + A ++S Y ++ N+ F+ ++++ ++ S
Sbjct: 81 LSAF-FLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFYNL-FLASMVLVLLADDAFSF 138
Query: 605 YLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQS 664
+ E MSL+ L+ + A Y ++ + +L +L +G+ +
Sbjct: 139 LVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYD--- 195
Query: 665 IFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPK 723
F ++ +++ +L LL + G K G+ P H+W+P + A ++ L+S K
Sbjct: 196 -FAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLK 254
Query: 724 LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMG 783
++++ I+ R++ L W ++L L S ++G + A+ +++ KR++AYS+I ++G
Sbjct: 255 VAIYGIL-RVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIG 313
Query: 784 LMLFSI---ISIKTSHNNLIIFNSCDSGLFYIITYIF----AILGAFGVIILLKNNTCNK 836
++ + + L+ + + L++++ + LGA V+
Sbjct: 314 IIFVGLGLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVL------HATG 367
Query: 837 TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896
T +++ GL +R PW A +I +++ PP GF +++ + + + + + L +
Sbjct: 368 TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLKL 427
Query: 897 MCSLIGA 903
+ A
Sbjct: 428 AVPIAAA 434
|
Length = 667 |
| >gnl|CDD|235767 PRK06277, PRK06277, hydrogenase subunit F; Validated | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 3e-13
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 78 TMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGL-LGIIQNDIKRIIAYSTLSQ 136
+V + + L + +I ++ A G+ + ++Q D KR++AY +SQ
Sbjct: 244 VLVALMLVIFKLFGGLSYFPSAQGVLIAL--SVLAMVFGVVMALLQTDYKRLLAYHAISQ 301
Query: 137 LGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
GY+ GL + IFH + H +K+ LFL AG I+ ++R +GGL M
Sbjct: 302 GGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVM 360
Query: 194 PITCITSLIGLLSLVGAPFFSGFYSK 219
P+ L L++ G P F+GF SK
Sbjct: 361 PVVAFMVLCAKLAISGVPPFNGFQSK 386
|
Length = 478 |
| >gnl|CDD|237157 PRK12648, PRK12648, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 72.9 bits (180), Expect = 7e-13
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 382 PMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P H WLP A + APT S L +A M+K G + L R P+ +F ++ LI+
Sbjct: 225 PFHFWLPHA-MAAPTPVSAYLHSATMVKAGVFLLARLW-PVLAGTEEWF-WIVGGAGLIT 281
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
++ + A+ Q D+K L+AYS+I+H+G +TL + + + ++ AI +I+HA +++F+
Sbjct: 282 LLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFM 341
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK- 559
+ G + ++ TR + G+ ++P + ++ + A +P +GF+ + M +
Sbjct: 342 AAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDT 401
Query: 560 -----FNFCIGVLTSTALIFSAAYSL 580
++ + V + A FS AYSL
Sbjct: 402 HLLGSLDWLLPVAATLAGAFSVAYSL 427
|
Length = 948 |
| >gnl|CDD|233663 TIGR01974, NDH_I_L, proton-translocating NADH-quinone oxidoreductase, chain L | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 1e-12
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 35/326 (10%)
Query: 588 FVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFML 647
F ++++ +N L ++ G E + L +LI ++ AAIK F++ + +L
Sbjct: 123 FTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLL 182
Query: 648 YGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVY 707
GI +++ GTL Q +F + S L L LL+ +G K P H W+PD
Sbjct: 183 LGIFLIFWYFGTLNFQEVFAL--APGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAM 240
Query: 708 QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAI---FSLIIGNVSA 764
+G + + L+ + T V L+ PL L ++ I + + A
Sbjct: 241 EGPTPVSALIHAAT-----MVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVA 295
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AIL 820
+ Q + KR++AYS+++ +G M ++ + + +F+++T+ F L
Sbjct: 296 LVQNDIKRILAYSTMSQLGYMFLALG-----------VGAYAAAIFHLMTHAFFKALLFL 344
Query: 821 GAFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
GA VI + E DI GL ++ P + +I +L GFP GF++K
Sbjct: 345 GAGSVIHAMH-------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDL 397
Query: 879 IFEKIFETQKIWLLLLI-IMCSLIGA 903
I E F + L + ++ + + A
Sbjct: 398 ILEAAFASGTHSFLFVAGLIGAFLTA 423
|
This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex [Energy metabolism, Electron transport]. Length = 609 |
| >gnl|CDD|214407 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 1e-12
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 49/320 (15%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F M++++ +N L +++G E + + +L+A I +++AAIK ++ + +
Sbjct: 119 LFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGV 178
Query: 647 LYGISILYGITGTLELQSIFNV-----------IKLNNINCSVLA----LSLLLII--VG 689
+ G+ ++Y G+L+ FN S LA + +LL+I +G
Sbjct: 179 ILGMVLIYKTIGSLDF-LTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIG 237
Query: 690 LSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749
S +LG+ H W+PD +G + + L+ + T + ++ R PL L
Sbjct: 238 KSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR-----SFPLFEKAPLTL 289
Query: 750 LILAIFSLIIGNVSA---ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCD 806
LI+ IF + +A + Q + K++IAYS+ + +G M+ II I+ SHN
Sbjct: 290 LIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVL-IIGIEGSHN--------- 339
Query: 807 SGLFYIITYIFAILGAFGVIILLKNNT---CNKTDELDI--FIGLHQRNPWCALIMMIFM 861
GLF+++ + F F ++ L + DE D+ GL P+ +M+I
Sbjct: 340 VGLFHLVNHAF-----FKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGS 394
Query: 862 FSLAGFPPTIGFYAKFFIFE 881
FS+ G P GFY+K I E
Sbjct: 395 FSIMGLPYLTGFYSKDLILE 414
|
Length = 669 |
| >gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 1e-12
Identities = 89/364 (24%), Positives = 171/364 (46%), Gaps = 28/364 (7%)
Query: 202 IGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFI---TLIIILI 258
IG+L L+G S + + L + W I I ++ I+L+
Sbjct: 31 IGVLLLIG--LIVELNSLNLFQSDKVLDGTNGLLLTNS---WIIISKIIIIIGSISILLM 85
Query: 259 SLDIKKKLAEYMSAFLILSGLIIGAF---CALDGMLFYIFFEATLIPIFIIIGTWGGSNR 315
S+ +++ + +G+ +++ + Y+ E + +FI++ S
Sbjct: 86 GSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAY 145
Query: 316 SY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAF 374
S A +K+F+ + S L L LY ++ ++ +I + + + +I IT I+
Sbjct: 146 STEAGLKYFVLGAVSSGLFLFGCALLYGLTGET-SIQGINSILTGDVGKI--LIT--ISL 200
Query: 375 AIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434
K+ P H W PD + APT + L A + K+G + +L P+ +N+++
Sbjct: 201 LFKLSAAPFHMWAPDVYEGAPTI-TTALLATVPKIGVFSILVQIGPV--------TNVVL 251
Query: 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALI 494
+++SIIY ++ A+ Q IK+L+AYS I HMGF+ G+ + + SIQ ++I MI + ++
Sbjct: 252 ICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIM 311
Query: 495 SSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
S F I L ++ LI G+ P ++ + L+ +P +GF+ +++I+
Sbjct: 312 SICSFSIILSL--KLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
Query: 555 LSAV 558
LS V
Sbjct: 370 LSGV 373
|
Length = 460 |
| >gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-12
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 37/322 (11%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F+ ++ + LL + L E+ L LI S + + +A+K ++ + S +
Sbjct: 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGL 179
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
+ L+ TGT L ++ + ++ S+ L L I+ K PF+ W+PD
Sbjct: 180 YLAAATLFLQTGTFALSAL------SGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA 233
Query: 707 Y----------QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFS 756
AS++ K+ +++ + +P VI + + ++AI +
Sbjct: 234 MEAPTPASAYLHAASMV---------KVGVYIFARAIQSMGPIPHVIGY--VGAVMAIVT 282
Query: 757 LIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI-ISIKTSHNNLIIFNSCDSGLFYIITY 815
L+ G + + Q + KR++AYS+I +G M F + ++I S L + YI +
Sbjct: 283 LLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLALEG------SIAYIFNH 336
Query: 816 IFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYA 875
FA F V L + T L G+ ++ P + + ++ G PP GF++
Sbjct: 337 AFAKSLFFLVAGALSYSC--GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFS 394
Query: 876 KFFIFEKIFETQKIWLLLLIIM 897
KF IF FE + +LL M
Sbjct: 395 KFPIFAAGFELSVEYWILLPAM 416
|
Length = 479 |
| >gnl|CDD|183646 PRK12646, PRK12646, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 1e-12
Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
+F+ + ++ +N + +Y+ EL S++ +LI+ NN S AI+ F++ +
Sbjct: 117 TLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVP 704
+L G +LY +TGT + I + ++I L + + + ++G K PFH+W+P
Sbjct: 177 LLVGFIMLYIMTGTNNITEILG--QADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 234
Query: 705 DVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSA 764
+ + L S T + +++R LL L + I+ + + +++ G+++A
Sbjct: 235 RAMAAPTPVSAYLHSATMVKAGIFLLFRF--TPLLGLSNMYIYIVTFVGLITMLFGSITA 292
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISI-----KTSHNNLIIFN--SCDSGLFYIITY-I 816
+ Q++ K ++AYS+I+ +G M+ +++ I + + + + LF+++ + I
Sbjct: 293 LKQWDLKGILAYSTISQLG-MIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAI 351
Query: 817 FAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
F GV I+ + T ++ I G+ Q P L+M I S+AG P GF +K
Sbjct: 352 FKCALFMGVGII---DHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 408
Query: 877 FFIFEKIFETQKIWLLLLIIM 897
+ + +T ++ LI M
Sbjct: 409 EMFLDALTQTGQLSQFSLISM 429
|
Length = 800 |
| >gnl|CDD|214400 MTH00020, ND5, NADH dehydrogenase subunit 5; Reviewed | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 2e-12
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 19/274 (6%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYIS-----NKSFNILSWHQLSITKIEQIWLFITFFI 372
AAIK L +G + +L++M L+ + FN++ S I I LF+ FI
Sbjct: 163 AAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSS--DITLICLFL--FI 218
Query: 373 AFAIKIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431
K +HTWLPDA +E PT S +I AA M+ G + L+R S P+F A
Sbjct: 219 GAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSS-PLFEQAPLALII 276
Query: 432 LIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISH 491
+ I SL + + +VQ D+KK+IAYS+ + +G++ + L+ SI ++ +++H
Sbjct: 277 VTIVGSLTVFF-AATVGLVQNDLKKVIAYSTCSQLGYMVV-ACGLSHYSI--SLFHLMNH 332
Query: 492 ALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGE 550
A + +F+S G + + + + + GG+I+ +P +FF+I SL+ P +GF +
Sbjct: 333 AFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSK 392
Query: 551 FMIILSAVKFNFCIGV--LTSTALIFSAAYSLCL 582
+I+ A + I L + + +A YS+ L
Sbjct: 393 DLILELAFGQYYLIFAYWLGCFSALLTAFYSIRL 426
|
Length = 610 |
| >gnl|CDD|183662 PRK12662, PRK12662, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 2e-12
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRM------SPLFELSN 98
+G K+A FP H WL + ++ + T I++I R+ + +
Sbjct: 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTL 276
Query: 99 TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYT---VSIFH 155
++ + + A+ F +L I+ DIKRI AYS++S +GY+ + + ++ Y ++ +
Sbjct: 277 PFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAY 336
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
++ H+ K+ LF+ +GSI + + + L+K MP + ++ LSL+G P SG
Sbjct: 337 IVNHSIVKSALFMVSGSISYHFG-TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSG 395
Query: 216 FYSK 219
F +K
Sbjct: 396 FVAK 399
|
Length = 492 |
| >gnl|CDD|214400 MTH00020, ND5, NADH dehydrogenase subunit 5; Reviewed | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 3e-12
Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 34/308 (11%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F +++++ +N L +++G E + L +LI I +++AAIK ++ + +
Sbjct: 119 LFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGL 178
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLI-IVGLSFKLGISPFHMWVPD 705
L + +L+ G+L+ S+FN++ + L L I VG S +LG H W+PD
Sbjct: 179 LLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLG---LHTWLPD 235
Query: 706 VYQGASIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLIL-AIFSLIIGNVS 763
+G + + L+ +T +F++I + PL + I+ L F+ +G V
Sbjct: 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLV- 294
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AI 819
Q + K++IAYS+ + +G M +++ SH LF+++ + F
Sbjct: 295 ---QNDLKKVIAYSTCSQLGYM---VVACGLSH--------YSISLFHLMNHAFFKALLF 340
Query: 820 LGAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKF 877
L A VI L +DE D+ GL P + +I SL GFP GFY+K
Sbjct: 341 LSAGSVIHAL-------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKD 393
Query: 878 FIFEKIFE 885
I E F
Sbjct: 394 LILELAFG 401
|
Length = 610 |
| >gnl|CDD|214407 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 3e-12
Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 18/180 (10%)
Query: 383 MHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITL-SLIS 440
+HTWLPDA +E PT S ++ AA M+ G + ++R S P+F A + LIIT+ ++
Sbjct: 244 LHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIR-SFPLFEKAP--LTLLIITIFGALT 299
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA----IIQMISHALISS 496
+ + + +VQ D+KK+IAYS+ + +G +M+ I I+G+ + +++HA +
Sbjct: 300 AFFAATVGLVQNDLKKVIAYSTCSQLG------YMVLIIGIEGSHNVGLFHLVNHAFFKA 353
Query: 497 AMFISIGFLYNQMKT--RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
+F+S G + + + + GG+I+ IP +I S + LP +GF + +I+
Sbjct: 354 LLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
Length = 669 |
| >gnl|CDD|235835 PRK06589, PRK06589, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 3e-12
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 30/327 (9%)
Query: 585 NIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYF-ILGILSS 643
N+ ++G +I +S + L ++++ EL++++ LI +NNI S KY IL I +
Sbjct: 123 NLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNI-SLSGGYKYLKILMISAL 180
Query: 644 GFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWV 703
L + ++Y TG L+ S + ++ LLL+ + K I P H W+
Sbjct: 181 LLFLPAVILIYTKTGNLDFVS-------GGLFSKNQSIILLLMFIYGIAKTAIFPVHSWL 233
Query: 704 PDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCL----LPLVINWQKILLILAIFSLII 759
P + LL + + IY++L+ L + L+ + I S+
Sbjct: 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFY 293
Query: 760 GNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAI 819
++ A+ N K+++AYS+I+ + L L S ++ + + + +++++ FA
Sbjct: 294 SSLKALKTDNIKKILAYSTISQLSLALLSAF--------ILTPKALGAAILHLVSHSFAK 345
Query: 820 LGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
+ F G I LK K D++D G + P + I+ I SL G P GF +K
Sbjct: 346 ICLFYSMGSIYSLK-----KEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
Query: 877 FFIFEKIFETQKIWLLLLIIMCSLIGA 903
F I E + WL +++++ + +
Sbjct: 401 FLILLAASEQNQPWLSIIVMLVVIASS 427
|
Length = 489 |
| >gnl|CDD|237166 PRK12666, PRK12666, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 4e-12
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 45/313 (14%)
Query: 280 IIGAFCALDGMLF--YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI-- 335
+ GAF L G LF ++FFE L + ++ G R A + + L+ S L LI
Sbjct: 122 LNGAF--LTGDLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLHYVAINLVASSLFLIGV 179
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQI-----WLFIT----FFIAFAIKIPIWPMHTW 386
+IY L+ L+ +I Q+ L + F IK +WP++ W
Sbjct: 180 GLIY------GVTGTLNMADLAQ-RIAQLPAADRALLEAGAALLLVVFLIKAAMWPLNFW 232
Query: 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL----IITLSLISII 442
LP A+ A + + AIM K+G Y +LR S +F + + ++ L ++
Sbjct: 233 LPPAYAAASAPVAALF-AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLA 291
Query: 443 YISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISI 502
+ ++ + +++L AY + G + I + + A+ ++ L ++A+F+
Sbjct: 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
Query: 503 GFLYNQ-------------MKTRLISNFGGIINVIPH----FSVFFIIFSLANCSLPGTS 545
+ Q + + IP + F I +LA LP S
Sbjct: 352 DLVERQRGAAADRLAVTPELYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLS 411
Query: 546 GFIGEFMIILSAV 558
GF+G+F +L A+
Sbjct: 412 GFLGKFA-LLQAL 423
|
Length = 528 |
| >gnl|CDD|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 6e-12
Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 38/239 (15%)
Query: 963 ASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIAL 1022
++ +IT L +PS + ++ + W++DP+D F Q+ +++AL
Sbjct: 44 GAQALITAALARLFPSDPIVGEEDSA----ALGRFWVLDPIDGTKGFLRGD-QFAVALAL 98
Query: 1023 KQKKQITHSVIYDPI-------RNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFS 1075
+ ++ VI P DLF+A++G GA+L + + ++ +
Sbjct: 99 IEDGEVVLGVIGCPNLPLDDGGGGDLFSAVRGQGAWLR--PLDGSSLQPLSVRQLTNAAR 156
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNL------AYVASGKLD-------GFFEK 1122
S E A + + L A VA G D +
Sbjct: 157 AS-FCESVESAHSSHRLQAAIKALGGTPQPVRLDSQAKYAAVARGAADFYLRLPLSMSYR 215
Query: 1123 GLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT--------GDIVAGNQKIFSQIISLI 1173
K W+ AAG L++ E+GG +++ G K + G ++A +I Q++ +
Sbjct: 216 -EKIWDHAAGVLIVEEAGGKVTDADG-KPLDFGKGRKLLNNGGLIAAPGEIHEQVLEAL 272
|
PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set. Length = 274 |
| >gnl|CDD|237137 PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 7e-12
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 45 IGAMAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS- 102
I K FPLHTWLPD+ E P S +I A ++ G + + R + + L + +
Sbjct: 193 IAFGVKLPIFPLHTWLPDAHGEASAPVS-MILAGVLLKMGGYALIRFN-VQMLPDAHVYF 250
Query: 103 --IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTV-----SIFH 155
+ +G + + L Q+++KR +AYS++S +G+ V LG++A+T ++
Sbjct: 251 APALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF--VLLGIAAFTDLGISGAMLQ 308
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
+++H A LF G H I NMGGL K MP T ++ + P SG
Sbjct: 309 MISHGLIAAALFFLTGV-TYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSG 367
Query: 216 FYSKDKKKIWIDYFNIYYFLGI---DGLSLWFIPLTAFITLI 254
F S+ + FLGI D S F +T + +
Sbjct: 368 FVSE-----------LTVFLGITSSDVYSSTFRTITILLAAV 398
|
Length = 504 |
| >gnl|CDD|235836 PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed | Back alignment and domain information |
|---|
Score = 69.0 bits (170), Expect = 8e-12
Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 33/281 (11%)
Query: 316 SYAAIKFFLYTLMGSLLMLISMIYLYY---------ISNKSFNILSWHQLSITKIEQIWL 366
AA+K F+ +G + + + + L+ + + ++T +
Sbjct: 165 GAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALT-----LI 219
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIF--- 422
+ FI K +P+HTWLPDA +E PT S +I AA M+ G Y + R S P+F
Sbjct: 220 CLLLFIGAMGKSAQFPLHTWLPDA-MEGPTPVSALIHAATMVTAGVYLVARMS-PLFELS 277
Query: 423 PDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG--FVTLGIFMLTKIS 480
P+A + + ++ ++ + I +VQ DIK+++AYS+++ +G F+ LG+ +
Sbjct: 278 PEALL----FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGV-----GA 328
Query: 481 IQGAIIQMISHALISSAMFISIGFLYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANC 539
AI +++HA + +F+ G + + M I GG+ +P F+I +LA
Sbjct: 329 YAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALI 388
Query: 540 SLPGTSGFIGEFMIILSA-VKFNFCIGVLTSTALIFSAAYS 579
+P +GF + I+ +A + + V +A YS
Sbjct: 389 GIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLTAFYS 429
|
Length = 624 |
| >gnl|CDD|233565 TIGR01770, NDH_I_N, proton-translocating NADH-quinone oxidoreductase, chain N | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 8e-12
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTA-GIFMITRMSPLFELSNTALS 102
+G + K + P H W+PD EG PTP +A + + + LF S
Sbjct: 211 VGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQI 270
Query: 103 IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFF 162
+L ++ + Q +KR++AYS++S +GY+ +GL I ++ + F
Sbjct: 271 FLLICAVLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL-EGIKAVLFYIFI 329
Query: 163 KALLFLSAGSIIINMKHNQD-----IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFY 217
AL+ + A ++ ++ +D I + GL+K P+ I LI + SL G P +GF+
Sbjct: 330 YALMSIGAFGVLALLRSRKDEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIPPLAGFF 389
Query: 218 SK 219
K
Sbjct: 390 GK 391
|
This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone [Energy metabolism, Electron transport]. Length = 468 |
| >gnl|CDD|176990 CHL00049, ndhB, NADH dehydrogenase subunit 2 | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 8e-12
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 50 KSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIG 108
K + P H W PD EG PTP A + + V A F S+ ++L I
Sbjct: 227 KLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEIL 286
Query: 109 AITAFFMG-LLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLF 167
AI + +G L+ I Q +KR++AYS++ Q+GY+ +G+ V ++T+ F +
Sbjct: 287 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMN 346
Query: 168 LSAGSIII--NMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L + I+ ++ D IR+ GLY P ++ + LLSL G P +GF+ K
Sbjct: 347 LGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
Length = 494 |
| >gnl|CDD|237165 PRK12665, PRK12665, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-11
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 37/292 (12%)
Query: 601 LLSIYLGLELM---SLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
L ++Y+G E++ S L L A+ A + Y ++ ++SS L GI+++Y T
Sbjct: 133 LFNLYVGFEILLVASYVLLTLGATAAR----VRAGVTYVMVSMVSSLLFLIGIALVYAAT 188
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL- 716
GTL + + ++L+ + +++V K + P W+PD Y A +T
Sbjct: 189 GTLNMADL--AVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAV 246
Query: 717 ---LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRM 773
LL+ K+ ++ II LL +L+++A+ ++++G + AI Q + KR+
Sbjct: 247 FAGLLT---KVGVYAIIR---THTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGL----FYIITYIFAILGAFGVIILL 829
++++ ++H+G M+F I S +GL +Y+ +I F V+ L+
Sbjct: 301 LSFTLVSHIGYMVFGIAL------------STVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
+ + L GL + +P A++ + +L G PP GF K + E
Sbjct: 349 ERQA--GSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
Length = 521 |
| >gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 3e-11
Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 55/230 (23%)
Query: 924 EAIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFL 982
E + A+++ L I + + + + K +N V + A+E +I +L +++P +
Sbjct: 3 ELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIV 62
Query: 983 IKKSNYLTNFENEN---IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI-R 1038
++S W+IDP+D NF + P + IA+ + + R
Sbjct: 63 GEESGVAEEVMGRRDEYTWVIDPIDGTKNFINGLPFVAVVIAV----YVILILAEPSHKR 118
Query: 1039 NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNL 1098
D A A RIR+
Sbjct: 119 VDEKKAELQLLA---VYRIRIV-------------------------------------- 137
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKGLK--PWNIAAGSLLIIESGGIISNF 1146
G++ + VA G D ++E G K W++AA + ++ E+GGI++++
Sbjct: 138 ---GSAVAKMCLVALGLADIYYEPGGKRRAWDVAASAAIVREAGGIMTDW 184
|
A superfamily of metal-dependent phosphatases with various substrates. Fructose-1,6-bisphospatase (both the major and the glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate to fructose-6-phosphate in gluconeogenesis. Inositol-monophosphatases and inositol polyphosphatases play vital roles in eukaryotic signalling, as they participate in metabolizing the messenger molecule Inositol-1,4,5-triphosphate. Many of these enzymes are inhibited by Li+. Length = 184 |
| >gnl|CDD|164587 MTH00011, ND2, NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 7e-11
Identities = 69/321 (21%), Positives = 144/321 (44%), Gaps = 36/321 (11%)
Query: 271 SAFLILSGLIIGAFCALDG---MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTL 327
+ FL S + +G AL + ++ E L+ ++ + + S AA+K+FL
Sbjct: 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQA 66
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
+GS L+L+ M ++ + NI + + ++ +K+ + P H W
Sbjct: 67 LGSGLLLLGMTMMWSFPSLLKNITA---------------LMLLVSLMLKLGMAPCHFWF 111
Query: 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
P + + + + ++ + K+ +L F ++ +++ +S + L
Sbjct: 112 P-SVMSSISWTLCLILSTWQKIAPLSILFFFTSHNI------LPMMTSMAAMSALAGGLG 164
Query: 448 AMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN 507
M Q ++ L+AYSSI HMG++T M++ S AI+ +++ +I++ + + +L N
Sbjct: 165 GMNQTQLRPLLAYSSIGHMGWMT----MISVFSPSMAILYFMTYIIITTPLMLLFAYL-N 219
Query: 508 QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVL 567
T+ S ++ S+F ++ SL LP +GF+ + M I + + + +L
Sbjct: 220 AFSTKFNSKISS-MSQTTSMSLFIMLLSLG--GLPPFTGFMPKLMAIETLTSNSMILILL 276
Query: 568 TSTALIFSAAYSLCLSKNIIF 588
LI + +L N+IF
Sbjct: 277 V---LIVGSLMNLFYYLNLIF 294
|
Length = 330 |
| >gnl|CDD|214459 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 8e-11
Identities = 116/477 (24%), Positives = 217/477 (45%), Gaps = 43/477 (9%)
Query: 161 FFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
F +L L +++ + ++ + K + ++ SLI LL + G +
Sbjct: 8 GFLLILILLLLPLLLPLNNS-----KLHIKKAVKLSFFISLIPLLIFLD----QGLETIL 58
Query: 221 KKKIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSA 272
WI+ F++ D S++F + ++T I+ SL + + +Y+
Sbjct: 59 TNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLL 118
Query: 273 FLILSGLIIGAFCALDGMLFYIF--FEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMG 329
FLI +++ A LF +F +E I F++I W G S+ + AA++ +Y +G
Sbjct: 119 FLIFMLILVSA-----NNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIG 173
Query: 330 SLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389
+ +L+SM++L N S+ I L++ + +A K + H WLP
Sbjct: 174 DIGLLLSMVWLLLNLN-SWEISQLFILNLD---LTLFLLGLLLAAMGKSAQFGFHPWLPS 229
Query: 390 AHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448
A +E PT S +L ++ M+ G + L+R S P+F + + ++ L +++++ +L A
Sbjct: 230 A-MEGPTPVSALLHSSTMVVAGVFLLIRLS-PLFQN-NQLILGAVLLLGALTMLFGALCA 286
Query: 449 MVQIDIKKLIAYSSIAHMGF--VTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FL 505
+ Q DIKK++A+S+ + +G VTLG+ Q A + + +HA + +F+ G +
Sbjct: 287 LTQNDIKKIVAFSTTSQLGLMMVTLGL-----NQPQLAFLHICTHAFFKAMLFMCSGSII 341
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFC 563
+ + I GG+ +P S + SLA P SGF + +I+ ++ N
Sbjct: 342 HGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAW 401
Query: 564 IGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA 620
+LT A +AAYS L + + + +S N L L L L ++A
Sbjct: 402 ALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILA 458
|
Length = 597 |
| >gnl|CDD|235806 PRK06459, PRK06459, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 1e-10
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 37/351 (10%)
Query: 566 VLTSTALIFSAAYSLCLSKN--------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCV 617
++++ I ++ YS+ I+ +LG I+++ +N L G E+M++ V
Sbjct: 51 IISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYV 110
Query: 618 LIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCS 677
IA K N A + G LS+ +L G + + I+GT F+ +
Sbjct: 111 AIALTKKN---KRPAFVFMAFGELSTVLILAGFAWAFIISGTT----NFSYLPSP----- 158
Query: 678 VLALSLLLIIVGLSFKLGISPFHM--WVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLI 735
+ L+L G K+G+ PF + W+P + A + +LS T L I ++ I
Sbjct: 159 ---VPLILASFGFIIKMGMMPFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTI 215
Query: 736 KCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF---SIISI 792
+ + +L + FS++ G + A N K ++A+S+I + G +L +
Sbjct: 216 LTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVT 275
Query: 793 KTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPW 852
K ++ F+ L +I Y FA A + L ++ I RN W
Sbjct: 276 KQLITSIEHFS-----LITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKI----RNRW 326
Query: 853 CALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
L + + SL+G P IG A + + E +F + ++ I+ + GA
Sbjct: 327 IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
Length = 585 |
| >gnl|CDD|164750 MTH00204, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-10
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 47/397 (11%)
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
I+ II+ +F ++F++ SL F I+L+ + CI + +
Sbjct: 59 INLIEWIISPTLNFQWGPLVFAVDGVSL---------FFILLTTLLIPICILISWKSIKF 109
Query: 574 FSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
+ LCL + ++G ++ +LL Y+ E + + + +LI + A+
Sbjct: 110 LFKEFLLCLLFLEVLLIGVFSVL---DLLLFYILFEGILIPMFLLIGIWGSREEKVRASY 166
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
+F S FML GI LY ITGT + Q + N+ +I +L L L+ K
Sbjct: 167 YFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFL----SLAVK 222
Query: 694 LGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKC--LLPLVIN-WQKILL 750
+ PFH+W+P + A + +++L+ + L + Y L L P + +++
Sbjct: 223 IPQIPFHIWLPQAHVEAPVAGSVILA---GILLKLGGYGFLRFSWPLFPAASEYFAPLIV 279
Query: 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS-----IKTSHNNLIIFNSC 805
+L++ ++I G+++ Q +FKR+IAYSS+AHMGL+ + + + + ++
Sbjct: 280 MLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFV 339
Query: 806 DSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLA 865
S LF +T+++ + T + + GL P +IM++ +
Sbjct: 340 SSALFIAVTFLYER---------------HHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
Query: 866 GFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIG 902
GFP + F +FF FE L + + G
Sbjct: 385 GFPLSCNFVGEFFSLLAAFEYS-----LGLGVLVTSG 416
|
Length = 485 |
| >gnl|CDD|177246 MTH00200, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-10
Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 30/352 (8%)
Query: 269 YMSAFLILSGLIIGAFCALDGM---LFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLY 325
+ ILS L +G L ++ E + I ++ + A K+F+
Sbjct: 4 LILPLFILS-LGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFII 62
Query: 326 TLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385
S L+L + + S Q I+++ +A A+K+ + P H
Sbjct: 63 QATASALLLFGGLLNAWTSG---------QWGISEMLGPLSETLILLALALKLGLAPGHF 113
Query: 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYIS 445
W+PD + +IL+ KL + LL A SN+++ L L+S++
Sbjct: 114 WVPDVLQGLSLQTGLILSTWQ-KLAPFALLIQ------LAPALNSNILLLLGLLSVLVGG 166
Query: 446 LIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFL 505
+ Q ++K++AYSSIAH+G++ G+ +++ ++ +I I+ +F+ + L
Sbjct: 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVI----ITLTVFLLLNLL 222
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCI 564
+ L S+ N I + + SL LP +GF +++I+ K F
Sbjct: 223 NSTKINSLSSSKTK--NPILSMLLGLTLLSLG--GLPPLTGFFPKWLILQELSKQGLFIY 278
Query: 565 GVLTSTALIFSAAYSLCLSKNIIFVLG-QMIMISGNNLLSIYLGLELMSLTL 615
+ + S + L LS + L I + + L + L L
Sbjct: 279 ATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLL 330
|
Length = 347 |
| >gnl|CDD|237164 PRK12664, PRK12664, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-10
Identities = 81/373 (21%), Positives = 146/373 (39%), Gaps = 53/373 (14%)
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
+ V+ S++ F L LP E + L V F L L +
Sbjct: 1 MTMVLYAISLYGFFFGLIFIVLPLLLYDWSEPVYNLDLVLFIVLSFSLALIFLYILPIKN 60
Query: 580 LCLSKNIIFVL---GQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIK 634
+ S+ + ++L + IS ++L + +G E M+L+ ++IA NI A I
Sbjct: 61 MRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIG---AFIH 117
Query: 635 YFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKL 694
Y + S +L G S N LL ++GL
Sbjct: 118 YACVHFFSGVLLLVGAS-------------------GQAQNGQYTGYCKLLFMLGLLINC 158
Query: 695 GISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKILLILA 753
P WV D Y AS ++LS T K++ V++ L + ++ILL L
Sbjct: 159 ACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLL----------LFFSGEEILLFLG 208
Query: 754 IFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI--ISIKTSHNNLIIFNSCDSGLFY 811
I + I G + A + N +R++ Y+ + MGL++ +I ++I S ++
Sbjct: 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGILILQIVLSVVYQ 268
Query: 812 IITYIFAILGAFGVIILLKNNTCNKTDELDIF-IGLHQRNPWCALIMMIFMFSLAGFPPT 870
+ ++ A ++ N+T + ++ +G + A+ +I + ++ FP T
Sbjct: 269 TLLFMVA------------DSVINRTRKFNLNRVGGLFKMSLEAMCCIIAILNMGAFPGT 316
Query: 871 IGFYAKFFIFEKI 883
GF +K I I
Sbjct: 317 AGFVSKSLITHSI 329
|
Length = 527 |
| >gnl|CDD|235837 PRK06591, PRK06591, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 2e-10
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGI 650
G + MI+ N+ ++Y+ +E+ +L+ VLIA NN S A Y I+G + + +L I
Sbjct: 127 GYLGMIATNDFFNLYVFIEISALSSYVLIA-SGNNPKSLIGAFDYLIMGSIGATLILIAI 185
Query: 651 SILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGA 710
L ITG+L + I ++ + N ++ +++ ++G K P H W+ Y
Sbjct: 186 GFLLSITGSLNMTDIAAYLQ-EHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNT 244
Query: 711 SIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI-------LAIFSLIIGNVS 763
+ +I + L+ + IIY+ ++I ++ I +A+ +LII
Sbjct: 245 ASVILVYLAGISTIIGIYIIYKFTY-----IIIGYETIKTAITNFIRPIALATLIIAPYF 299
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF 823
A NFK +I YS +G +F + II + +
Sbjct: 300 AYQAKNFKNIIIYSCFTQIGY----------------VFLLYVTENGIIILPSLLLADSI 343
Query: 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883
I L +D + ++R P LI++ + S G P + F+ K I E +
Sbjct: 344 NKIALFL---------IDAYNESYKREPNKVLIIIAIICSC-GLPISPLFFIKVNILELL 393
Query: 884 FETQKIWLLLLIIMCSLIGA 903
TQ + L +II+ S +G+
Sbjct: 394 L-TQNLLLDFIIILLSSVGS 412
|
Length = 432 |
| >gnl|CDD|214454 MTH00198, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 3e-10
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
+LFIT I F K+ P H W PD + APT + L AI+ K Y LL SL I
Sbjct: 302 YLFITVAILF--KLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLT-SLVIT-- 355
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
S L++++++IS++ + A+ Q IK+L+AYS I H+GF+ +G+ T S+Q +
Sbjct: 356 -----SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAS 410
Query: 485 IIQMISHALISSAMFISIGFLY-------NQMKTRLISNFGGIINVIPHFSVF-----FI 532
+++ + + A F I L + ++ + ++ +I
Sbjct: 411 WTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYI 470
Query: 533 IFSLANCSL-----PGTSGFIGEFMIILSAVKFNF 562
FSLA L P GF+G++ I++ ++K F
Sbjct: 471 AFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAF 505
|
Length = 607 |
| >gnl|CDD|181206 PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 3e-10
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 26/262 (9%)
Query: 635 YFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKL 694
+F LG L + + +L+ GTL+L+ + ++ + + LL ++G
Sbjct: 139 WFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLG----SDIWLLGVIGFGLLA 194
Query: 695 GISPFHMWVPDVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILA 753
GI P H WVP + AS L ST K+ L I+ L+ PL W LL+L
Sbjct: 195 GIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLW--WGVALLVLG 252
Query: 754 IFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFS----IISIKTSHNNLIIFNSCDSGL 809
+ + +G + A+ ++N +R++AY ++ ++G++L + I LI GL
Sbjct: 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLV-GGL 311
Query: 810 FYIITY-IFA---ILGAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFS 863
++++ + +F LGA V +T DI G+ ++ P ++ M++ + +
Sbjct: 312 YHLLNHSLFKSVLFLGAGSVWF--------RTGHRDIEKLGGIGKKMPVISIAMLVGLMA 363
Query: 864 LAGFPPTIGFYAKFFIFEKIFE 885
+A PP GF ++ I++ F+
Sbjct: 364 MAALPPLNGFAGEWVIYQSFFK 385
|
Length = 593 |
| >gnl|CDD|214423 MTH00112, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 62.5 bits (153), Expect = 4e-10
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S L+L S N + Q IT++ +A A+K
Sbjct: 55 AATKYFLTQAAASALILFSST---------TNAWNTGQWDITQLTNPTSCTLLTLALAMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ + P H WLP+ + T ++IL+ KL LL + L++TL+
Sbjct: 106 LGLAPFHFWLPEVLQGSTTTTALILSTWQ-KLAPLTLLLMTSNSLN------PTLLLTLA 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S + + Q ++K++A+SSIAH+G++ I K++ ++ + L+++
Sbjct: 159 ILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLT----LLTFYIYILMTTP 214
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
MF+++ N T+ + + P + ++ L+ LP +GF+ +++I+
Sbjct: 215 MFLTL----NTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQEL 270
Query: 558 VKFNFCI 564
K N
Sbjct: 271 TKQNMTP 277
|
Length = 346 |
| >gnl|CDD|214432 MTH00144, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 4e-10
Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
+ +K+F+ +GS L++ + +Y +S SW + + +K
Sbjct: 55 SVVKYFIIQSLGSSLLIFGSLIMYNLSF------SW-----------FSMSLLLLGLCLK 97
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ ++P H W+P +L K+ LL L Y+ + L+ +S
Sbjct: 98 LGLFPFHFWVPSVMAGLSWLSCFLLLTW-QKVAPLFLLSNFLD-----LYWLAYLLCVIS 151
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S + S+ + Q ++ L+AYSSI+H G++ + I + + + + S
Sbjct: 152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGF 207
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F S+ + L S S+ ++ SL LP GF + ++++S+
Sbjct: 208 LFFSLWSGDSGSMKDLGSLKPSYKT---GLSIISLLLSLG--GLPPFLGFCSKLLVLISS 262
Query: 558 VKFNFCIGVLTSTALIFSAAYSL 580
++ + + +L L+ + SL
Sbjct: 263 MESSPLLLIL---LLLLGSLISL 282
|
Length = 328 |
| >gnl|CDD|237156 PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 6e-10
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 47/316 (14%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG----FMLYGISILY 654
+NL+++++ EL S+T +LI EAA + + +L +G +L G+ +L
Sbjct: 115 DNLITLFVFWELTSITSFLLIGFNHER----EAARRAALQALLVTGGGGLALLAGLILLG 170
Query: 655 GITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF-KLGISPFHMWVPDVYQGASII 713
+TGT L + + I L L++LL+++G +F K PFH W+P+ + + +
Sbjct: 171 NVTGTYSLSELLA--SGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPV 228
Query: 714 ITLLLSTT-PKLSLFVIIYRLLIKCLLPLV---INWQKILLILAIFSLIIGNVSAITQYN 769
L S T K IY L+ L P++ WQ IL + +++ G + A+ Q +
Sbjct: 229 SAYLHSATMVKAG----IY--LLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTD 282
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA------- 822
K ++AYS+++ +G ++ ++ + + I L A
Sbjct: 283 LKLILAYSTVSALGTLVM-LLGLGSEL---------------AIKAAVLFLVAHSLYKGA 326
Query: 823 -FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
F V ++ + T T ++ GL + P A ++ S+AG PP GF AK I+E
Sbjct: 327 LFMVAGIIDHET--GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
Query: 882 KIFETQKIWLLLLIIM 897
+ E L+L +
Sbjct: 385 ALLEAPLWSLILTVAA 400
|
Length = 761 |
| >gnl|CDD|235810 PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase subunit D4; Validated | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 7e-10
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 45 IGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITR--MSPLFELSNTAL 101
+G K P HTWLPD+ +E TP S L+ A ++ G + + R + E
Sbjct: 213 VGFGIKIPLVPFHTWLPDAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLA 271
Query: 102 SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMT 158
+ ++ + I Q D+K+++AYS++ +GY+ + + + ++F +++
Sbjct: 272 PWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMIS 331
Query: 159 HAFFKALLFLSAGSIIINMKHNQDIRNMGGLY---KYMPITCITSLIGLLSLVGAPFFSG 215
H ALLFL G ++ ++D+ + GL + +PIT ++G+++ G P G
Sbjct: 332 HGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVG 390
Query: 216 FYSK 219
F ++
Sbjct: 391 FIAE 394
|
Length = 500 |
| >gnl|CDD|237168 PRK12668, PRK12668, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 7e-10
Identities = 79/371 (21%), Positives = 156/371 (42%), Gaps = 52/371 (14%)
Query: 543 GTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGN--- 599
T F+G +++ K + G++ Y+L + V ++ +
Sbjct: 51 LTVTFLGFDLVLGRVDKLSRVFGLIFGIMAFIGVIYALHVKDPGQHVAA-LLYVGSALGA 109
Query: 600 ----NLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYG 655
+LL++++ ELM+ T L+ ++ + A +Y ++ +L +L GI + Y
Sbjct: 110 VFAGDLLTLFVFWELMAFTSTFLVWARGTKA-AVRAGFRYLLVHVLGGVLLLAGILLHYA 168
Query: 656 ITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIIT 715
TG+ +I + + LI++G P H W+PD Y A++ +
Sbjct: 169 ETGSFAFGAIA----------GLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
Query: 716 LLLST-TPKLSLFVIIYR------LLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
+ LS T K +++ + R LLI + I +A++ G A+ +
Sbjct: 219 VFLSAFTTKTAVYA-LARAFPGTELLI---------Y--IGAAMAVY----GVFFALLEN 262
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
+ +R+++Y ++ +G M+ I I T+ + N + F I Y + + G ++
Sbjct: 263 DLRRLLSYHIVSQVGYMVAG-IGIGTA----LAINGAVAHAFNHILYKGLLFMSAGAVLY 317
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
K EL GL++ P AL ++ S++ FP GF +K I E
Sbjct: 318 RTGT--EKLTELG---GLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHY 372
Query: 889 IWLLLLIIMCS 899
+W+ LL+++ S
Sbjct: 373 VWVWLLLLLAS 383
|
Length = 581 |
| >gnl|CDD|214462 MTH00217, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-09
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 630 EAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVG 689
+A+ +F + S FML GI LY GT + Q++ + + + L +
Sbjct: 160 QASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIF----LGFFLS 215
Query: 690 LSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRL----LIKCLLPLVIN- 744
L+ K+ PFH+W+P + A + +++L+ ++ +L I+ PL+
Sbjct: 216 LAIKIPKIPFHIWLPQAHVEAPVAGSVILAG--------VLLKLGGYGFIRFSWPLLPEA 267
Query: 745 ---WQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+ ++ L++ ++I G+++ Q + KR+IAYSS+AHMGL+ I S
Sbjct: 268 SEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFS 317
|
Length = 482 |
| >gnl|CDD|237137 PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-09
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 608 LELMSLTLCVLIASQKNNIFSSEAAIKYFI------LGILSSGFMLYGISILYGITGTLE 661
LEL+ + L + I + ++ AA K+ + + IL +G L L G T T
Sbjct: 118 LELVPVYLLISIWGGQKRLY---AATKFILYTALASIFILVAGLAL----ALSGDTFT-- 168
Query: 662 LQSIFNVIKLNNINCSVLALSLLL---IIVGLSFKLGISPFHMWVPDVYQGASIIITLLL 718
F++ +L + LAL LLL ++ KL I P H W+PD + AS ++++L
Sbjct: 169 ----FDLAELGAKSYP-LALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMIL 223
Query: 719 S-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYS 777
+ K+ + +I R ++ L + + L IL + ++I G ++A Q N KR +AYS
Sbjct: 224 AGVLLKMGGYALI-RFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
Query: 778 SIAHMGLMLFSIISI 792
S++HMG +L I +
Sbjct: 283 SVSHMGFVLLGIAAF 297
|
Length = 504 |
| >gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase, bacterial | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 53/248 (21%), Positives = 86/248 (34%), Gaps = 45/248 (18%)
Query: 926 IKAARKSALIINRGSLELENLRFEEKKYENF-------VFNINKASEKIITKILFNTYPS 978
IK AR + I L +K+ V ++A+ + I + L P
Sbjct: 6 IKIARAAGEEI---------LPVYQKELAVAQKADNSPVTEADRAAHRFILEGLRALTPD 56
Query: 979 YAFLIKKSNYLTNFENENI-----------WIIDPLDNITNFSHNFPQYCISIALKQKKQ 1027
L + E+ +I W++DPLD F + + ++IAL +
Sbjct: 57 IPVLSE--------EDASIPLTPRQTWQRFWLVDPLDGTKEFINRNGDFTVNIALVEHGV 108
Query: 1028 ITHSVIYDPIRNDLFTAIKGCGAYL----NEKRIRVNKRNKINDALIGTDFSFKNNINSE 1083
V+Y P + A G A + ++ R + L+ +
Sbjct: 109 PVLGVVYAPATGVTYFATAGKAAKREGDGQALKAPIHVRPWPSGPLLVVISRSHAEEKTT 168
Query: 1084 EYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGI 1142
EY +LR G SSL VA G D + G W+ AAG ++ +GG
Sbjct: 169 EYLANLG-----YDLRTSGGSSLKFCLVAEGSADIYPRLGPTGEWDTAAGHAVLAAAGGA 223
Query: 1143 ISNFKGEK 1150
I + G
Sbjct: 224 IFDLDGSP 231
|
Sulfate is incorporated into 3-phosphoadenylylsulfate, PAPS, for utilization in pathways such as methionine biosynthesis. Transfer of sulfate from PAPS to an acceptor leaves adenosine 3'-5'-bisphosphate, APS. This model describes a form found in bacteria of the enzyme 3'(2'),5'-bisphosphate nucleotidase, which removes the 3'-phosphate from APS to regenerate AMP and help drive the cycle [Central intermediary metabolism, Sulfur metabolism]. Length = 249 |
| >gnl|CDD|131015 TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subunit NdhF3 family | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 2e-09
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 16/287 (5%)
Query: 270 MSAFLILSGLIIGAFCAL---DGMLF-YIFFEATLIPIFIIIGTW-GGSNRSYAAIKFFL 324
++ F L GL L D + F Y+ E + +++IG W A FL
Sbjct: 119 LARFFALLGLFEAGLGGLVLSDSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFL 178
Query: 325 YTLMGSLLMLISMIYLYYISNKSFN---ILSWHQLSITKIEQIWLFITFFIAFAI-KIPI 380
+G L++L+ ++ L ++ S+N + W + L IA K
Sbjct: 179 TKRVGDLILLMGVVALSPLAG-SWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQ 237
Query: 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
+P+H WL +A +E P S++ ++++ G + L++ P+ S +I + ++
Sbjct: 238 FPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVLT-LSPVALTALIAIGSVT 294
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
I SLIA+ QIDIK+ ++YS A+MG V + + + A++ +++HA+ + +F+
Sbjct: 295 AIGGSLIAIAQIDIKRALSYSVSAYMGLVFIAVGLG---QGDLALLLLLTHAIAKALLFM 351
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
SIG + T+ ++ GG+ + P + F++ S ++P F
Sbjct: 352 SIGSIIWNTVTQDLTELGGLWSRRPISGLSFVVGSAGLIAVPPLGSF 398
|
This family represents a subfamily of NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighboring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby. Length = 606 |
| >gnl|CDD|183649 PRK12649, PRK12649, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 4e-09
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 586 IIFVLGQMI-MISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG 644
++ +G MI M+ N + +++ EL S+T +LI ++ S A K ++
Sbjct: 117 LLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGL 176
Query: 645 FMLYGISILYGITGTLELQSIFNVIK-LNNINCSVLAL-SLLLIIVGLSFKLGISPFHMW 702
FM G +L+ ITGT ++ +I + + NI L L +L+LI +G + K PF++W
Sbjct: 177 FMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIW 236
Query: 703 VPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNV 762
+P+ + + + L S T + ++ R I + W ++ + ++++
Sbjct: 237 LPNAMEAPTPVSAFLHSATMVKAGVYLVAR--IHPIFSGTEAWFILVSGTGMITMVLAGF 294
Query: 763 SAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA 822
A Q + K ++AYS+I+ + ++ ++ T H + + L T+ +
Sbjct: 295 LAFRQTDIKAILAYSTISQLAYLM-TMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLV 353
Query: 823 FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEK 882
G++ T ++ GL + P ++ I ++AG PP GF +K +E
Sbjct: 354 AGIVAHEA-----ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
Query: 883 IFE 885
E
Sbjct: 409 SVE 411
|
Length = 789 |
| >gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or related enzymes of inositol monophosphatase family | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 52/200 (26%)
Query: 960 INKASEKIITKIL------FNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNF 1013
+ +E+II K+L + I+K + E I ++DPLD TN+
Sbjct: 39 ADLKAEEIILKLLREEGVFGQIISEESGEIRKGSG------EYIAVLDPLDGSTNYLSGI 92
Query: 1014 PQYCISIALKQKKQ-------------ITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVN 1060
P Y +S+AL + +Y P +Y++
Sbjct: 93 PFYSVSVALADPRSKVKAATLDNFVSGEGGLKVYSPPTR---------FSYISV------ 137
Query: 1061 KRNKINDALIGTDFS-----FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGK 1115
K+ L+ S ++ N E++ + + K R++G+++L LAY G
Sbjct: 138 --PKLGPPLVPEVPSKIGIYEGSSRNPEKFLLLSRNGLK---FRSLGSAALELAYTCEGS 192
Query: 1116 LDGFFEK--GLKPWNIAAGS 1133
F + L+ +++AA
Sbjct: 193 FVLFLDLRGKLRNFDVAAAL 212
|
These are Mg++ dependent phosphatases. Members in this family may have fructose-1,6-bisphosphatase and/or inositol-monophosphatase activity. Fructose-1,6-bisphosphatase catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. Length = 244 |
| >gnl|CDD|164587 MTH00011, ND2, NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 6e-09
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 48 MAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFI 107
M K P H W P M + LI + A + ++ F S+ L ++ +
Sbjct: 99 MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSIL-----FFFTSHNILPMMTSM 153
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLF 167
A++A GL G+ Q ++ ++AYS++ +G+MT+ + V + +++I + MT+ L
Sbjct: 154 AAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLM 212
Query: 168 LSAGSI-IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L + + K N I +M T ++ I LLSL G P F+GF K
Sbjct: 213 LLFAYLNAFSTKFNSKISSMS------QTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
Length = 330 |
| >gnl|CDD|237164 PRK12664, PRK12664, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 6e-09
Identities = 43/180 (23%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+G + A FP +W+ D+ +A +++ + + L S I+
Sbjct: 152 LGLLINCACFPASSWVVDAY-----PAASNFGIIVLSLFTTKVAALVLLLFFSGE--EIL 204
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS-----AYTVSIFHLMTH 159
LF+G ITA + + ++ +I+R++ Y+ + Q+G + + +G S A + I ++
Sbjct: 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGILILQIVLS 264
Query: 160 AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
++ LLF+ A S+I + ++ +GGL+K M + + +I +L++ P +GF SK
Sbjct: 265 VVYQTLLFMVADSVINRTRK-FNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSK 322
|
Length = 527 |
| >gnl|CDD|214444 MTH00165, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 58.6 bits (143), Expect = 1e-08
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 34/303 (11%)
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
+G + +L+S+ ++ ++ S+N + + E + + + +A K P +WL
Sbjct: 146 IGDVAILLSIAWM--MNFGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWL 203
Query: 388 PDAHVEAPT------EGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISI 441
P A + APT S ++ A G Y L+RF+ +F S +FS ++ +SL+++
Sbjct: 204 PAA-MAAPTPVSALVHSSTLVTA-----GVYLLIRFNNLLF---SSFFSKFLLLISLLTM 254
Query: 442 IYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQG---AIIQMISHALISSAM 498
L A + D+KK+IA S+++ +G M++ +S+ A +++HAL + +
Sbjct: 255 FMAGLGANFEFDLKKIIALSTLSQLG------LMMSILSLGFPKLAFFHLLTHALFKALL 308
Query: 499 FISIGFLYNQMK-TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--L 555
F+ G + + M ++ I GG+ N +P S F I +L+ C P SGF + +I+ +
Sbjct: 309 FLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMV 368
Query: 556 SAVKFNFCIGVLTSTALIFSAAYSL-----CLSKNIIFVLGQMIMISGNNLLSIYLGLEL 610
S NF I L + + +YS +S + + +L + L
Sbjct: 369 SMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLF 428
Query: 611 MSL 613
MS+
Sbjct: 429 MSI 431
|
Length = 573 |
| >gnl|CDD|177116 MTH00041, ND2, NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 1e-08
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
A IK+FL + ++L + ++S SW SI I +A A+K
Sbjct: 55 ATIKYFLVQAFSAAILLNGALIQAWLSG------SW---SINGPLNTLSSIIITLALALK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ + P H W PD P +I+A L+ S + SN++I
Sbjct: 106 LGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-------NLLNSNILILCG 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S++ + Q +K++A+SSIAH+G++ + S II + + +I+++
Sbjct: 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNAS----IIMFLIYIIINTS 214
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F+ + N +S+ + + P + FI+ L+ LP +GF+ +F+ +
Sbjct: 215 IFL----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCL 270
Query: 558 VKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ N +L S LI + SL I F
Sbjct: 271 IQNNS---ILISIILIIGSLLSLFFYLRISF 298
|
Length = 349 |
| >gnl|CDD|214436 MTH00151, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 2e-08
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 39/306 (12%)
Query: 410 GCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH---- 465
G + L+RF F +S FS+ ++ +SL++++ + A + D+KK+IA S+++
Sbjct: 222 GVFLLIRFF--PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVM 279
Query: 466 -----MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGG 519
+G +L +F L +HAL + +F+ G +++ T+ I G
Sbjct: 280 MFSLGLGMPSLALFHL------------YTHALFKALLFLCAGSIIHSSSGTQDIRLLGS 327
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK--FNFCIGVLTSTALIFSAA 577
+ +P S I SL+ C P SGF + +I+ S++ + + +L + +A
Sbjct: 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTAL 387
Query: 578 YSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA----SQKNNIFSSEAAI 633
YS LS +++ + +S + Y+ L ++ L+L LI FS E
Sbjct: 388 YSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE--- 444
Query: 634 KYFILGILSSGF--MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLI--IVG 689
F L + + + S ++KL+ S+ LS L +
Sbjct: 445 --FFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKS 502
Query: 690 LSFKLG 695
LS KL
Sbjct: 503 LSLKLS 508
|
Length = 565 |
| >gnl|CDD|214423 MTH00112, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 2e-08
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFF 114
P H WLP+ ++G T +ALI + A + ++ S + +++L + ++
Sbjct: 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN-----SLNPTLLLTLAILSTLI 164
Query: 115 MGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHAFFKALLFLSA 170
G G+ Q +++I+A+S+++ LG+M + S T I+ LMT F
Sbjct: 165 GGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMF-------- 216
Query: 171 GSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ +N + +++M + P T ++ LLSL G P +GF K
Sbjct: 217 --LTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPK 263
|
Length = 346 |
| >gnl|CDD|214466 MTH00226, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 4e-08
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 47 AMA-KSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMS-PLFELSNTALSI 103
AMA K FP H WLP + +E P S L+ A ++ G + + R+S P+ L L+
Sbjct: 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLL-AGILLKLGGYGLVRLSWPILPLGAQNLAP 297
Query: 104 ILFIGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTH 159
+ I G Q D+KR++AYS+++ +G +++ L + T SIF ++ H
Sbjct: 298 AVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAH 357
Query: 160 AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+LLF+ +I+ + H + I+ GL MPI ++ L+ V P F
Sbjct: 358 GIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
Length = 505 |
| >gnl|CDD|235050 PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 5e-08
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 566 VLTS--TALIFSAAYSLCLSKNIIFVL------GQMIMISGNNLLSIYLG--LELMSLTL 615
+LT T L AA+ + + + L GQ+ + + ++L +L LEL+ + L
Sbjct: 94 LLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
Query: 616 CVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISIL--YGITGTLELQSIFNVIKLNN 673
+ I K + AA K+ + SS F+L + YG T T ++ ++ K
Sbjct: 154 LLAIWGGKKRQY---AATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAA--KDFG 208
Query: 674 INCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYR 732
+ +L + LLI G+ KL I P H W+PD + A+ + +LL+ K+ + ++ R
Sbjct: 209 LGFQLLCYAGLLIAYGV--KLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALL-R 265
Query: 733 LLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+ L + +L++L + ++I +++ Q N KR IAYSSI+HMG +L I S
Sbjct: 266 MNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGS 324
|
Length = 525 |
| >gnl|CDD|177142 MTH00070, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 1e-07
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 35/267 (13%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S L+L S N + +I ++ I IA +K
Sbjct: 55 AATKYFLTQASASALILFSST---------INAWFTGEWTIMNMQTPLPTIMLTIALMMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ I P H WLP+ +IL+ KL LL + I + SNL+I +
Sbjct: 106 LGIAPFHFWLPEVLQGLDLTTGLILSTWQ-KLAPMALL---IQISHLLN---SNLLIIMG 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
L+S + + Q ++K++AYSSIAH+G++ I +LT S ++ ++ + +++S+
Sbjct: 159 LLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWM---IIILT-FSPHLTLLNLLIYLIMTSS 214
Query: 498 MFISIGFL----YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
MF+ + L N++ + N P + ++ L+ LP T+GFI +++I
Sbjct: 215 MFLMLMNLNSTNINKLSSSWSKN--------PTLTSMMMLTLLSLGGLPPTTGFIPKWLI 266
Query: 554 ILSAVKFNFCIGVLTSTALIFSAAYSL 580
+ K N +T + SA SL
Sbjct: 267 LQELTKQNL---TTLATLMALSALLSL 290
|
Length = 346 |
| >gnl|CDD|214416 MTH00066, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-07
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 36/372 (9%)
Query: 226 IDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSAFLILSGL 279
I FNI D S+ F+P+ F+T I+ ++ D K + +Y+ FLI +
Sbjct: 69 IFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMI 128
Query: 280 IIGAFCALDGMLFYIF--FEATLIPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLLMLIS 336
++ A LF +F +E I F++IG W ++ + AA++ LY +G + +++S
Sbjct: 129 LVTA-----NNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILS 183
Query: 337 MIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPT 396
M +L + N Q+ + + +A A K + +H WLP A +E PT
Sbjct: 184 MAWLA----MNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPT 238
Query: 397 EGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL--ISIIYISLIAMVQID 453
S +L ++ M+ G + L+RF P+ + + L I L L ++ ++ + A+ Q D
Sbjct: 239 PVSALLHSSTMVVAGIFLLIRFH-PLLENNQ---TALTICLCLGALTTLFTAACALTQND 294
Query: 454 IKKLIAYSSIAHMGF--VTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FLYNQMK 510
IKK++A+S+ + +G VT+G+ Q A + +HA + +F+ G +++
Sbjct: 295 IKKIVAFSTSSQLGLMMVTIGLNQ-----PQLAFFHICTHAFFKAMLFLCSGSIIHSLND 349
Query: 511 TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFCIGVLT 568
+ I GG+ +P + I SLA P +GF + II ++ N +LT
Sbjct: 350 EQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILT 409
Query: 569 STALIFSAAYSL 580
A F+A YS
Sbjct: 410 LIATSFTAVYSF 421
|
Length = 598 |
| >gnl|CDD|180945 PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase subunit M; Validated | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILFIGAITA 112
PLHTWLPD+ +PA A++ + G + + R LF + + + IG I+
Sbjct: 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISV 282
Query: 113 FFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLF 167
+ L I Q DIKR++AYS++ +GY+ V + ++ +++H ALLF
Sbjct: 283 IYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLF 340
|
Length = 501 |
| >gnl|CDD|235044 PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-07
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 50 KSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIG 108
K + P H W PD EG PTP A + + I + F + ++
Sbjct: 223 KISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTAL 282
Query: 109 AITAFFMG-LLGIIQNDIKRIIAYSTLSQLGYMTVGL--GVSA-YTVSIFHLMTHAFFKA 164
AI + +G ++ + Q +KR++AYS++ Q G++ +GL G A Y +F+L+ + F
Sbjct: 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNL 342
Query: 165 LLFLSAGSIIINMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
F A I+ +++ D I + GLY+ P+ + + LLSL G P +GF+ K
Sbjct: 343 GAF--ACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
Length = 513 |
| >gnl|CDD|177252 MTH00209, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-07
Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 44/403 (10%)
Query: 201 LIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL 260
L L V +F + + + ++ +I + L ID +SL F + I+ ++ S
Sbjct: 14 LFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFS- 72
Query: 261 DIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-------- 312
++ F++L L I + M F IF I +++G W G
Sbjct: 73 TSYMAGEKFKKRFILLVLLFILS------MNFLIFVPNL---ITLLLG-WDGLGLVSYLL 122
Query: 313 ------SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWL 366
S A + L +G L+++S+ ++ N W+ + +
Sbjct: 123 VIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-------WNIFYLNFNSNLGS 175
Query: 367 FITFFIAFA--IKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFP 423
I+ I A K P WLP A + APT S ++ ++ ++ G Y L+RF +F
Sbjct: 176 VISVLIVLAAMTKSAQIPFSAWLP-AAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF- 233
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQG 483
+S +FS ++ L ++ + S+ A V+ D+KK+IA S+++ +G L + L +
Sbjct: 234 -SSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLG---LMMCSLGLNQPEL 289
Query: 484 AIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLP 542
A +I+HAL + +FI G +++ ++ I G + +P S+ I +L+ C +P
Sbjct: 290 AFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIP 349
Query: 543 GTSGFIGEFMIILSAV--KFNFCIGVLTSTALIFSAAYSLCLS 583
+GF + +I+ S + +L + +AAYS+ LS
Sbjct: 350 FLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLS 392
|
Length = 564 |
| >gnl|CDD|164753 MTH00207, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 2e-07
Identities = 58/221 (26%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFP 423
++ ++ IA K P +WLP A + APT S ++ ++ ++ G + L+RF F
Sbjct: 180 YIALSIMIAAMTKSAQMPFSSWLP-AAMAAPTPVSALVHSSTLVTAGVFLLIRFY--PFL 236
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV--TLGIFMLTKISI 481
++Y+F+ ++ + ++++ L AM + D+KK+IA S+++ +G + +LG+ M
Sbjct: 237 SSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKL--- 293
Query: 482 QGAIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCS 540
A+ +I+HAL + +F+ G +++ ++ + G + N +P + +I +LA C
Sbjct: 294 --ALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCG 351
Query: 541 LPGTSGFIGEFMIILSAVKF--NFCIGVLTSTALIFSAAYS 579
P SGF + +I+ S++ + N + ++ A +AAYS
Sbjct: 352 SPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
|
Length = 572 |
| >gnl|CDD|177246 MTH00200, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAF 113
P H W+PD ++G + + LI + A ++ +++P +I+L +G ++
Sbjct: 109 APGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAP-----ALNSNILLLLGLLSVL 163
Query: 114 FMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSI 173
G G+ Q +++I+AYS+++ LG++ GL S L+ ++ +
Sbjct: 164 VGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTVFL 217
Query: 174 IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYY 233
++N+ ++ I ++ PI + + LLSL G P +GF+ K + ++
Sbjct: 218 LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFI 277
Query: 234 FLGI 237
+ I
Sbjct: 278 YATI 281
|
Length = 347 |
| >gnl|CDD|164750 MTH00204, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-07
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLFELSNTALS-IILFI 107
K Q P H WLP + A ++I A ++ G + R S PLF ++ + +I+ +
Sbjct: 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVML 281
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKA 164
I + L Q D KR+IAYS+++ +G + +GL + ++F ++ H F +
Sbjct: 282 SVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSS 341
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
LF+ A + + H + I+ GL MP+ I L+ L+ +G P F
Sbjct: 342 ALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
Length = 485 |
| >gnl|CDD|237158 PRK12650, PRK12650, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 3e-07
Identities = 81/366 (22%), Positives = 153/366 (41%), Gaps = 63/366 (17%)
Query: 566 VLTSTALIFSAAYSLCLSKNI-------IFVLGQMIMISGNNLLSIYLGLELMSLTLCVL 618
V+ + I+SA Y N F+ ++++ ++++ +++ EL+SL L
Sbjct: 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFL 149
Query: 619 IASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIF--NVIKLNNINC 676
IA + +I+ IL +L ++I TGT L I +V
Sbjct: 150 IARSGSG--GEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLT 207
Query: 677 SVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI---IYRL 733
+V+A+ LI V K PFH W+P+ + + L + V+ IY L
Sbjct: 208 TVVAV---LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAA------VVKAGIYLL 258
Query: 734 L-IKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISI 792
L + V W +L+I+ + + ++G V A+ + + K++ AYS+++ +G + + I +
Sbjct: 259 LRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW-IVATIGV 317
Query: 793 KT------------SHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDEL 840
T +H +F S LF +I GV+ ++
Sbjct: 318 GTPFALTAAVVHTLAH---ALFK---SSLFMLI----------GVVD-------HQAGTR 354
Query: 841 DI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIM 897
DI L +R P+ + + I S+A PP GF +K + E ++L+++
Sbjct: 355 DIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLV 414
Query: 898 CSLIGA 903
+ +GA
Sbjct: 415 GAALGA 420
|
Length = 962 |
| >gnl|CDD|236005 PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 4e-07
Identities = 71/279 (25%), Positives = 136/279 (48%), Gaps = 36/279 (12%)
Query: 293 YIFFEATLIPIFIIIGTW----GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-S 347
Y+F+E + ++++G W G ++ AA K F+ +G +L+ ++ L++ +
Sbjct: 148 YVFWELVGMCSYLLVGFWYDRKGAAD---AAQKAFVVNRVGDFGLLLGILGLFWATGSFD 204
Query: 348 FNILS--WHQLSITKIEQIWLFITF----FIAFAIKIPIWPMHTWLPDAHVEAPTEGS-V 400
F+ ++ +L + WL + F+ K +P+H WLPDA +E PT S +
Sbjct: 205 FDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISAL 263
Query: 401 ILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460
I AA M+ G + + R P+F + + T ++ + + S IA+ Q DIKK +AY
Sbjct: 264 IHAATMVAAGVFLVARM-YPVFEQFPAVMTVIAWTGAITAFLGAS-IALTQNDIKKGLAY 321
Query: 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK---------- 510
S+I+ +G++ + M G + +++HA + +F+ G + + M+
Sbjct: 322 STISQLGYMVMA--MGCGAYSAG-LFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLA 378
Query: 511 --TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
RL+ GG+ +P ++ F+I LA +P +GF
Sbjct: 379 QDMRLM---GGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
Length = 673 |
| >gnl|CDD|214459 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 4e-07
Identities = 105/442 (23%), Positives = 199/442 (45%), Gaps = 60/442 (13%)
Query: 474 FMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533
F+L I + ++ ++++ + + + F + + LI G+ ++ ++S +
Sbjct: 9 FLLILILLLLPLLLPLNNSKLHIKKAVKLSFFIS-LIPLLIFLDQGLETILTNWSWINLG 67
Query: 534 FSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAY-------SLCLSKNI 586
N S F ++ F +T + L FS Y + +
Sbjct: 68 LFSLNLS----------FKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLL 117
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F++ +I++S NNL +++G E + + +LI+ ++ AA++ I + +
Sbjct: 118 LFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGL 177
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
L + L + E+ +F + N++ ++ L LLL +G S + G FH W+P
Sbjct: 178 LLSMVWLLLNLNSWEISQLF----ILNLDLTLFLLGLLLAAMGKSAQFG---FHPWLPSA 230
Query: 707 YQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL---LILAIFSLIIGNVS 763
+G + + LL S+T + V LLI+ L PL N Q IL L+L +++ G +
Sbjct: 231 MEGPTPVSALLHSST----MVVAGVFLLIR-LSPLFQNNQLILGAVLLLGALTMLFGALC 285
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF--AILG 821
A+TQ + K+++A+S+ + +GLM+ + + N +I T+ F A+L
Sbjct: 286 ALTQNDIKKIVAFSTTSQLGLMMVT-----------LGLNQPQLAFLHICTHAFFKAML- 333
Query: 822 AF---GVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
F G II NN E DI GL + P+ + + + +L GFP GF++K
Sbjct: 334 -FMCSGSIIHGLNN------EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSK 386
Query: 877 FFIFEKIFET-QKIWLLLLIIM 897
I E + + W LLL ++
Sbjct: 387 DLILESMNGSYLNAWALLLTLL 408
|
Length = 597 |
| >gnl|CDD|214453 MTH00196, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAF 113
P H W PD EG PT +AL+ A + GIF I L + IL IG + +
Sbjct: 113 PFHMWAPDVYEGAPTKTTALL--AIVPKLGIFSI-----LVSIGLNV--NILLIGGLFSL 163
Query: 114 FMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGS 172
F+G +G + Q IKR++AYS + +G++ G+ + ++ SI + + F ++ + S
Sbjct: 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSF-ESIQASLVYLFIYIIMSICVFS 222
Query: 173 IIINMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
II+ + ++ I GL + +PI IT + LS+ G P GF K
Sbjct: 223 IILALNVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
Length = 365 |
| >gnl|CDD|131015 TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subunit NdhF3 family | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 4e-07
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 29/311 (9%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
++L Y+ LE+++L+ +LI A F+ + +L G+ L + G
Sbjct: 140 DSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPLAG 199
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG---ASIIIT 715
+ + N+N + L L +I G + K P H+W+ + +G ASI+
Sbjct: 200 SWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRN 259
Query: 716 LLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIA 775
++ T +V+I + L P+ + L+ + + I G++ AI Q + KR ++
Sbjct: 260 SVVVAT---GAWVLIKLQPVLTLSPVALT---ALIAIGSVTAIGGSLIAIAQIDIKRALS 313
Query: 776 YSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGAFGVIILLKNN 832
YS A+MGL+ I++ D L ++T+ A + + G II
Sbjct: 314 YSVSAYMGLVF---IAVGL--------GQGDLALLLLLTHAIAKALLFMSIGSIIWNTV- 361
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T +L GL R P L ++ L PP F+A + + ++ T WL+
Sbjct: 362 ----TQDLTELGGLWSRRPISGLSFVVGSAGLIAVPPLGSFWAWLKLADGLWATSP-WLV 416
Query: 893 LLIIMCSLIGA 903
++++ +L+ A
Sbjct: 417 GVLLVVNLLTA 427
|
This family represents a subfamily of NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighboring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby. Length = 606 |
| >gnl|CDD|177158 MTH00095, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 4e-07
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 382 PMHTWLPDAHVEAPTE-GSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P +WLP A + APT S++ ++ ++ G L+ FS I + +++ + L +
Sbjct: 182 PFSSWLPKA-MSAPTPVSSLVHSSTLVTAGLILLMNFSYLIL---NMNVMKIMLLIGLFT 237
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFM-LTKISIQGAIIQMISHALISSAMF 499
+ + SL A+V+ D+KK++A S+++ MGF L L+ +S I ++SHAL S +F
Sbjct: 238 MFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVS----FIHLLSHALFKSCLF 293
Query: 500 ISIGFL----YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
+ +G+L + Q R SN G + I + +F L C L TSG + + +I+
Sbjct: 294 MQVGYLIHSNFGQQDGRNYSNNGNLPMFI-QLQLLVTLFCL--CGLMFTSGMVSKELILE 350
|
Length = 527 |
| >gnl|CDD|177167 MTH00105, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 4e-07
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S+L+++++I S Q +ITK+ IA A+K
Sbjct: 55 AATKYFLTQATASMLLMMAIIINLMYSG---------QWTITKLTNPTASTLMTIALAMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIML----KLGCYGLLRFSLPIFPDASYYFSNLI 433
+ + P H W+P+ T+G + + ++L KL +L I P + NL+
Sbjct: 106 LGLAPFHFWVPEV-----TQGIPLSSGMILLTWQKLAPLSIL---YQISPSINP---NLL 154
Query: 434 ITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHAL 493
+TL+++SI+ + Q ++K++AYSSIAHMG +M + + + + L
Sbjct: 155 LTLAILSILIGGWGGLNQTQLRKILAYSSIAHMG------WMTAILPYNPTL--TLLNLL 206
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
I M +++ L + + N P + ++ L+ LP +GF+ ++MI
Sbjct: 207 IYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMI 266
Query: 554 ILSAVKFN 561
I K N
Sbjct: 267 IQELTKNN 274
|
Length = 347 |
| >gnl|CDD|236005 PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 5e-07
Identities = 70/301 (23%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 600 NLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGT 659
NL+ IY+ EL+ + +L+ + +++AA K F++ + +L GI L+ TG+
Sbjct: 143 NLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGS 202
Query: 660 LELQSI----FNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIIT 715
+ I ++ ++ + L +L+ +G K P H+W+PD +G + I
Sbjct: 203 FDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISA 262
Query: 716 LLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLI---IGNVSAITQYNFKR 772
L+ + T V L+ + P+ + ++ ++A I +G A+TQ + K+
Sbjct: 263 LIHAAT-----MVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKK 317
Query: 773 MIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AILGAFGVIIL 828
+AYS+I+ +G M+ ++ S +GLF+++T+ + LG+ VI
Sbjct: 318 GLAYSTISQLGYMVMAMGCGAYS-----------AGLFHLMTHAYFKAMLFLGSGSVIHG 366
Query: 829 LKNNTCNK---TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
++ + ++ + GL + P A+ +I +++G PP GF++K I FE
Sbjct: 367 MEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE 426
Query: 886 T 886
Sbjct: 427 A 427
|
Length = 673 |
| >gnl|CDD|214432 MTH00144, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 5e-07
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+G K FP H W+P M G + S + A +F++ F ++
Sbjct: 92 LGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLL 147
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKA 164
I ++A + G+ Q ++ ++AYS++S G+M V + + + + +
Sbjct: 148 CVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG-SWLMWMYFLIYIVSSG 206
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LF S + + ++++G L K T ++ + LLSL G P F GF SK
Sbjct: 207 FLFFS-----LWSGDSGSMKDLGSL-KPSYKTGLSIISLLLSLGGLPPFLGFCSK 255
|
Length = 328 |
| >gnl|CDD|236008 PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 7e-07
Identities = 42/166 (25%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 382 PMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISI 441
P+H WL +A +E P S++ ++++ G + L++ P+ S ++I + ++
Sbjct: 239 PLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVL-ALSPVALTVLIVIGTVTA 295
Query: 442 IYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFIS 501
I SL+A+ QIDIK+ ++YS+ A++G V + + + A++ +++HA+ + +F+S
Sbjct: 296 IGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ---QPDIALLLLLTHAIAKALLFMS 352
Query: 502 IGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
+G + T+ ++ GG+ + +P ++ F++ S +L GF
Sbjct: 353 VGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGF 398
|
Length = 613 |
| >gnl|CDD|214398 MTH00004, ND5, NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 1e-06
Identities = 113/422 (26%), Positives = 188/422 (44%), Gaps = 58/422 (13%)
Query: 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSAFLILSGLIIG 282
FNI +D SL F+P+ F+T I+ S D K +Y+ FLI ++I
Sbjct: 74 FNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILI- 132
Query: 283 AFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLY 341
A + +I +E I F++IG W G + + AA++ +Y +G + +++SM +L
Sbjct: 133 --TANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLA 190
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
N ++ I QL + +A K + +H WLP A +E PT S +
Sbjct: 191 MTLN-TWEI---QQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSAL 245
Query: 402 L-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL----ISIIYISLIAMVQIDIKK 456
L ++ M+ G + L+R P+ + +T+ L ++ ++ + A+ Q DIKK
Sbjct: 246 LHSSTMVVAGIFLLIRTH-PLL-----QNNQTALTICLCLGALTTLFAATCALTQNDIKK 299
Query: 457 LIAYSSIAHMGFVTLGIFMLTKISI---QGAIIQMISHALISSAMFISIG-FLYNQMKTR 512
+IA+S+ + +G M+ I + Q A + + +HA + +F+ G ++N +
Sbjct: 300 IIAFSTSSQLG------LMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQ 353
Query: 513 LISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFCIGVLTST 570
I GG+ +P S I +LA P SGF + II L+ N +LT
Sbjct: 354 DIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLL 413
Query: 571 ALIFSAAYSLCLSKNIIFVL------GQMIMISGNN-----------LLSIYLGLELMSL 613
A F+AAYSL + I+ V I+ N L SI GL + S
Sbjct: 414 ATSFTAAYSLRM---ILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISST 470
Query: 614 TL 615
L
Sbjct: 471 IL 472
|
Length = 602 |
| >gnl|CDD|236310 PRK08601, PRK08601, NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-06
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 368 ITFFIAFAIKIPI--WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA 425
I + A+ IP WP WL ++ V APT S I+ A ++ G L RFS P+F D
Sbjct: 206 INLLLILAVMIPAAQWPFQRWLIESAV-APTPVSAIMHAGLVNAGGIMLTRFS-PLFHDD 263
Query: 426 SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV----TLGIFMLTKISI 481
L++ + IS++ + I++VQ+D K+ + S++A MGF+ LG +
Sbjct: 264 --IAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYS------ 315
Query: 482 QGAIIQMISHALISSAMFISIG 503
AII +I H L + +F+ G
Sbjct: 316 -AAIIHLILHGLFKATLFLQSG 336
|
Length = 509 |
| >gnl|CDD|235836 PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed | Back alignment and domain information |
|---|
Score = 51.3 bits (124), Expect = 2e-06
Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 73/344 (21%)
Query: 588 FVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGF 645
F ++++ +NLL ++ G E + L +LI +K + + AA+K FI+ +
Sbjct: 124 FTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS--AGAAAMKAFIVNRVGDVG 181
Query: 646 MLYGISILYGITGTLELQSIF-NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+ GI +L+ G+L +F + + S L L LL+ +G K P H W+P
Sbjct: 182 LALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLP 241
Query: 705 D-----------------VYQGASIIITL--LLSTTPKLSLFVIIYRLLIKCLLPLVINW 745
D V G ++ + L +P+ LFV
Sbjct: 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFV----------------- 284
Query: 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSC 805
I+ + + + Q + KR++AYS+++ +G M ++ +
Sbjct: 285 ----AIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVG-----------AY 329
Query: 806 DSGLFYIITYIF--AI--LGAFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMI 859
+ +F+++T+ F A+ LGA VI + E DI GL ++ P +I
Sbjct: 330 AAAIFHLMTHAFFKALLFLGAGSVIH-----AMH--HEQDIRKMGGLRKKMPVTYATFLI 382
Query: 860 FMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
+L G PP GF++K I E F I L + L+GA
Sbjct: 383 GTLALIGIPPFAGFFSKDEILEAAFANGHINLFVA----GLVGA 422
|
Length = 624 |
| >gnl|CDD|177253 MTH00210, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 3e-06
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 28/243 (11%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNILSWHQLSITKIEQIWLFITFFIAF-- 374
AAIK L +G + ++++MI + F+ +S L +T I + L I + F
Sbjct: 163 AAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTIS--SLLVTNINKESLTIICLLLFIG 220
Query: 375 AI-KIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL 432
A+ K +HTWLPDA +E PT S +I AA M+ G + ++R S P+F +
Sbjct: 221 AVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIIR-SGPLFEGSP------ 272
Query: 433 IITLSLISII------YISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKIS-IQGAI 485
+ L++++I+ + + + +VQ D+KK+IAYS+ + +G++ M+ IS ++
Sbjct: 273 -LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV----MVCGISNYSTSL 327
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
+++HA + +F+S G + + + + GG+I IP V +I SL+ P
Sbjct: 328 FHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYL 387
Query: 545 SGF 547
+GF
Sbjct: 388 TGF 390
|
Length = 616 |
| >gnl|CDD|178499 PLN02911, PLN02911, inositol-phosphate phosphatase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 961 NKASEKIITKILFNTYPSYA-FLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCIS 1019
++A+E+ + I+ +PS+A F + ++ +W++DP+D +F P +
Sbjct: 74 DRAAEEAMRSIILENFPSHAIFGEEHGLRCGEGSSDYVWVLDPIDGTKSFITGKPLFGTL 133
Query: 1020 IALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTD----FS 1075
IAL K + +I P+ + + + G LN + I + DA + T FS
Sbjct: 134 IALLYKGKPVLGIIDQPVLKERWVGVAGRATTLNGEEISTRSCASLKDAYLYTTSPHMFS 193
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLL 1135
+ ++ K K + G +ASG +D E GLKP++ A L+
Sbjct: 194 ------GDAEDAFARVRDKVK-VPLYGCDCYAYGLLASGHVDLVVESGLKPYDYLA--LV 244
Query: 1136 -IIE-SGGIISNFKGEK 1150
++E +GG+I+++KG K
Sbjct: 245 PVVEGAGGVITDWKGRK 261
|
Length = 296 |
| >gnl|CDD|214466 MTH00226, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 4e-06
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 630 EAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLL-IIV 688
+AA +F ++ S ML + LY I GT + + +++ + L I +
Sbjct: 182 QAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDY---LTLASCSHVVSEQTQKWIFLGIFL 238
Query: 689 GLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPL-VINWQ 746
++ K+ I PFH+W+P + A + ++LL+ KL + ++ L +LPL N
Sbjct: 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVR--LSWPILPLGAQNLA 296
Query: 747 KILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
++ + I ++ G+ + Q + KR++AYSS+AHMGL+ ++++
Sbjct: 297 PAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
|
Length = 505 |
| >gnl|CDD|235050 PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 4e-06
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 54 FPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELSNTAL--SIILFIGAI 110
PLHTWLPD+ E P L+ A ++ G + + RM+ A +++ +G +
Sbjct: 230 VPLHTWLPDAHGEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVV 288
Query: 111 TAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLG-VSAYTVS--IFHLMTHAFFKALLF 167
+ L Q ++KR IAYS++S +G++ +G+G + S + +++H A LF
Sbjct: 289 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLF 348
Query: 168 LSAGSIIINMKHNQDIRNMGGLYKYMPI 195
G+ + H + MGG+ + M
Sbjct: 349 FLVGA-TYDRTHTLMLDEMGGVGQKMRK 375
|
Length = 525 |
| >gnl|CDD|236171 PRK08168, PRK08168, NADH dehydrogenase subunit L; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 4e-06
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL 432
A +K P+H WL +EAPT S +L A ++ LG + L+RF+ P+ A L
Sbjct: 209 AVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA-PLLEQAPPARWLL 266
Query: 433 IITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV----TLGIFMLTKISIQGAIIQM 488
++ + L + + L+ + +I IK +A+S++A MGF+ LG++ L A++ +
Sbjct: 267 VL-VGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYEL-------ALLHL 318
Query: 489 ISHALISSAMFISIG 503
++H+L + F+S
Sbjct: 319 VAHSLYKAHAFLSAS 333
|
Length = 516 |
| >gnl|CDD|235837 PRK06591, PRK06591, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 5e-06
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 26/291 (8%)
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI--SNKSFNI 350
Y+F E + + +++I + A + + +G+ L+LI++ +L I S +I
Sbjct: 141 YVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDI 200
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKL 409
++ Q T I + I FF+ AI K +PMH W+ A+ + V LA I +
Sbjct: 201 AAYLQ-EHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTII 259
Query: 410 GCYGLLRFSLPI--FPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467
G Y + +F+ I + +N I ++L ++I A + K +I YS +G
Sbjct: 260 GIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIG 319
Query: 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHF 527
+V L +T+ I +++ ++ A+F LI + P+
Sbjct: 320 YVFL--LYVTENGIIILPSLLLADSINKIALF-------------LIDAYNESYKREPN- 363
Query: 528 SVFFIIFSLANCSLPGTSGFIGEFMIILSAVK----FNFCIGVLTSTALIF 574
V II + +C LP + F + I+ + +F I +L+S +F
Sbjct: 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLF 414
|
Length = 432 |
| >gnl|CDD|176990 CHL00049, ndhB, NADH dehydrogenase subunit 2 | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 7e-06
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS 426
FIT I F K+ + P H W PD + +PT L+ R F +S
Sbjct: 219 FITVGIGF--KLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSS 276
Query: 427 YYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGI 473
+ L+ L+++S+I +LIA+ Q +K+++AYSSI +G+V +GI
Sbjct: 277 NEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
|
Length = 494 |
| >gnl|CDD|177244 MTH00197, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 7e-06
Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 41/349 (11%)
Query: 273 FLILSGLIIGAFCALDG---MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMG 329
FL L + G +L L +I E LI ++ + A+K+FL+ G
Sbjct: 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFG 60
Query: 330 SLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389
S L+L+ + + + + +K+ +P H W+P
Sbjct: 61 SALLLMGGSLSFS-NLYLSLLSVV---------------LVILGLLLKLGAFPFHFWVPS 104
Query: 390 AHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM 449
+E+ + + L A KL +L F+ ++ S++S + + M
Sbjct: 105 V-MESLSWFNCFLLATWQKLAPLLILAFN--------SSSFMGLLICSVLSSLIGGIGGM 155
Query: 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM 509
Q +I++L+AYSSI H G++ + + I + + LI + + ++
Sbjct: 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSI--------FMLYYLIYFVIMFMLFLFLSKN 207
Query: 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLT 568
++ + VF + L+ LP SGF +++I+ S + N I +
Sbjct: 208 NLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFML 267
Query: 569 STALIFSAAYSLCLSKNIIFVLGQMI----MISGNNLLSIYLGLELMSL 613
+ FS Y L L+ + + MI I+ L + ++ L
Sbjct: 268 ILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMMLPL 316
|
Length = 323 |
| >gnl|CDD|235806 PRK06459, PRK06459, hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-06
Identities = 53/224 (23%), Positives = 83/224 (37%), Gaps = 55/224 (24%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKP---------------LAITANLKAF------ 40
S+N GWEI+ + SY+ I L + AF
Sbjct: 91 SDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTT 150
Query: 41 -----------LINRIGAMAKSAQFPLH--TWLPDSMEGPTPASA-LIHAATMVTAGIFM 86
++ G + K P WLP + G P++ I +ATM G++
Sbjct: 151 NFSYLPSPVPLILASFGFIIKMGMMPFLVSEWLPIA-HGNAPSNFSAILSATMTLMGVYG 209
Query: 87 ITRMSPLFELSNTALS--IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
I +M+ L + IL IGA + F L + ++K ++A+ST+ G + V L
Sbjct: 210 ILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAL 269
Query: 145 GVSAYTVS---------------IFHLMTHAFFKALLFLSAGSI 173
G Y V+ I + H+ K LFLS+G
Sbjct: 270 G--LYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQ 311
|
Length = 585 |
| >gnl|CDD|214407 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 8e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG 46
S+N QLF+GWE VG+ SYLL+ FW + A A +KA ++NR+G
Sbjct: 130 SDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVG 174
|
Length = 669 |
| >gnl|CDD|177251 MTH00208, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 1e-05
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 31/305 (10%)
Query: 291 LFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFN 349
L +I +E F++I W ++ + +A++ +Y +G I +I +S +FN
Sbjct: 162 LLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGD----IGIILFLSLSLINFN 217
Query: 350 ILSWHQLSITKIEQIWLFITFFIAFAI------KIPIWPMHTWLPDAHVEAPTEGSVIL- 402
SW+ I + F+ + F I K + +H WLP A +E PT S +L
Sbjct: 218 --SWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLH 274
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
++ M+ G + L+R S P+ + S +F +L + L ++ ++ + A+ Q DIKK+IAYS+
Sbjct: 275 SSTMVVAGVFLLIRTS-PLISN-SPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYST 332
Query: 463 IAHMGFVT----LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT-RLISNF 517
+ +G + L L A+ + +HA + +F+ G + + + + +
Sbjct: 333 TSQLGLMVVAIGLNQPNL-------ALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKM 385
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII-LSAVKFNFCIGVLTST-ALIFS 575
GG+ ++P S I+ SLA P +GF + +I+ + + ++ + A + +
Sbjct: 386 GGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLT 445
Query: 576 AAYSL 580
A YS
Sbjct: 446 AVYSF 450
|
Length = 628 |
| >gnl|CDD|214399 MTH00014, ND4, NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 18 ASYLLIGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAA 77
S ++ + P NL +LI + M K + +H WLP + A ++I A
Sbjct: 169 NSLSMLMSSMEPPSIYLMNL-WWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAG 227
Query: 78 TMVTAGIFMITRMSPLFELSNTALS-IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQ 136
++ G + + RMS LF N +LS I + A L+ I Q D+K +IAYS++
Sbjct: 228 ILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGH 287
Query: 137 LGYMTVG 143
+G MT G
Sbjct: 288 MGLMTAG 294
|
Length = 452 |
| >gnl|CDD|235044 PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 1e-05
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 234 FLGI---DGLSLWFIPLTAFITLIIILISLDIKKK----LAEYMSAFLILSGLIIGAFC- 285
FLG D LS+ F + A TL+ +L+S ++ L E+ + ++L+ + G F
Sbjct: 70 FLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAA--ILLTATLGGMFLS 127
Query: 286 -ALDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYI 343
A + ++ +I E I +++ G RS AA+K+ L S + L LY +
Sbjct: 128 GATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGL 187
Query: 344 SNKSFN---ILSWHQLSITKIEQIWL-FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS 399
S S I S + + L F+ IAF KI P H W PD + +PT
Sbjct: 188 SGGSTQLSAIALALITSPSLGLALALVFVIAGIAF--KISAVPFHQWTPDVYEGSPTPVV 245
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459
L+ G +R + FP + L L+++S++ +++A+ Q +K+++A
Sbjct: 246 AFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLA 305
Query: 460 YSSIAHMGFVTLGI 473
YSSI GFV +G+
Sbjct: 306 YSSIGQAGFVMIGL 319
|
Length = 513 |
| >gnl|CDD|237166 PRK12666, PRK12666, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-05
Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 63/310 (20%)
Query: 631 AAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLAL----SLLLI 686
A + Y + +++S L G+ ++YG+TGTL + + ++ + + AL + LL+
Sbjct: 160 AGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADL--AQRIAQLPAADRALLEAGAALLL 217
Query: 687 IVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI-----IYRLLIKCLL-- 739
+V L K + P + W+P Y AS P +LF I IY +L L
Sbjct: 218 VVFLI-KAAMWPLNFWLPPAYAAAS---------APVAALFAIMTKVGIYAILRLSTLLF 267
Query: 740 --------PLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+W LL + +L G + + +R+ AY + G +L +
Sbjct: 268 GPEAGASAGFGQDW---LLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLL---AA 321
Query: 792 IKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII------------LLKNNTCNKTDE 839
I + + L+Y++ A A ++ L +
Sbjct: 322 IGLGNPAAT-----AAALYYLVHSTLAA-AALFLLADLVERQRGAAADRLAVTPELYDLD 375
Query: 840 LDIFIGLHQRNPWC-ALIMMIFMF---SLAGFPPTIGFYAKFFIFEKIFETQKI----WL 891
+ + P AL+ ++F +LAG PP GF KF + + + WL
Sbjct: 376 EEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWL 435
Query: 892 LLLIIMCSLI 901
L+++ L
Sbjct: 436 WALVLLSGLA 445
|
Length = 528 |
| >gnl|CDD|177142 MTH00070, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-05
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
I M K P H WLP+ ++G + LI + A + ++ ++S L + ++
Sbjct: 100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LL 154
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHA 160
+ +G ++ G G+ Q +++I+AYS+++ LG+M + L S + I+ +MT +
Sbjct: 155 IIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSS 214
Query: 161 FFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
F L+ L++ + I + + P ++ LLSL G P +GF K
Sbjct: 215 MFLMLMNLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPK 263
|
Length = 346 |
| >gnl|CDD|214338 CHL00025, ndhF, NADH dehydrogenase subunit 5 | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-05
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
Query: 382 PMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P+H WLPDA +E PT S +I AA M+ G + + R LP+F Y NLI SLI
Sbjct: 245 PLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARL-LPLF-IVIPYIMNLI---SLIG 298
Query: 441 IIYISL---IAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHA 492
II L +A+ Q DIK+ +AYS+++ +G++ L + + S + A+ +I+HA
Sbjct: 299 IITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHA 350
|
Length = 741 |
| >gnl|CDD|176954 CHL00011, ndhD, NADH dehydrogenase subunit 4 | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-05
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 26/182 (14%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAAT-MVTAGIFM------ITRMSPLFELSNTALS 102
K PLHTWLPD T A H +T M+ AGI + + R++ EL A S
Sbjct: 224 KLPIIPLHTWLPD-----THGEA--HYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHS 274
Query: 103 I----ILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTV---SIFH 155
I ++ +GAI + + Q ++K+ IAYS++S +G++ +G+G T +I
Sbjct: 275 IFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQ 334
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMP-ITCITSLIGLLSLVGAPFFS 214
+++H F A LF AG+ ++ + MGG+ MP I + S + SL P S
Sbjct: 335 IISHGFIGAALFFLAGTSYDRIR-LVYLDEMGGIAIPMPKIFTMFSSFSMASL-ALPGMS 392
Query: 215 GF 216
GF
Sbjct: 393 GF 394
|
Length = 498 |
| >gnl|CDD|237164 PRK12664, PRK12664, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 3e-05
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 29/312 (9%)
Query: 244 FIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303
FI L+ + LI + I L IK M +L+ I A + L I FE +
Sbjct: 41 FIVLSFSLALIFLYI-LPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSA 99
Query: 304 FIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQ 363
+II A I + +L+L+ S +
Sbjct: 100 LMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVG--------------ASGQAQNGQYTGY 145
Query: 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423
L F + I +P +W+ DA+ A G ++L+ K+ LL F
Sbjct: 146 CKLL--FMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF------ 197
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFML--TKISI 481
+ +++ L +I+ IY + A ++ +I++L+ Y+ + MG + + I + ++I
Sbjct: 198 ---FSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAI 254
Query: 482 QGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSL 541
I+Q++ + + +F+ + N+ + ++ GG+ + ++ II L +
Sbjct: 255 GILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKM-SLEAMCCIIAILNMGAF 313
Query: 542 PGTSGFIGEFMI 553
PGT+GF+ + +I
Sbjct: 314 PGTAGFVSKSLI 325
|
Length = 527 |
| >gnl|CDD|214458 MTH00206, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-05
Identities = 72/366 (19%), Positives = 134/366 (36%), Gaps = 42/366 (11%)
Query: 547 FIGEFMIILSAVKFNFCI----GVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLL 602
+ ++ILS + + + Y L +F++ + S +NLL
Sbjct: 59 PLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLI---LFFSSSNLL 115
Query: 603 SIYLGLELMSLTLCVLI---ASQKNNIFSSEAAIKYFILGILSSGF-MLYGISILYGITG 658
Y+ E + +LI +QK + + YF+ L +L + L G
Sbjct: 116 LFYILFEASLIPTLLLITRWGNQKERLNAG----YYFLFYTLIGSLPLLIALLFLQNSLG 171
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASII-ITLL 717
+L L ++ N L L I+ KL + H+W+P + A + +L
Sbjct: 172 SLSLYILYFSKLTTWNN----NLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVL 227
Query: 718 LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYS 777
KL + ++ +I L P +IL ++ I+ + + Q + K +IAYS
Sbjct: 228 AGVLLKLGGYGMM--RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYS 285
Query: 778 SIAHM-----GLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNN 832
S++HM G++ S K + +I S LF ++ +++
Sbjct: 286 SVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC-----------LANLLYERSH 334
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T + GL P + ++F + G PP + + I +F L
Sbjct: 335 TRT----ILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLP 390
Query: 893 LLIIMC 898
LL +
Sbjct: 391 LLGLGF 396
|
Length = 450 |
| >gnl|CDD|237154 PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-05
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 59/280 (21%)
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
ML GI IL GT L + + ++++++LI+VG K I PFH W+P
Sbjct: 173 MLVGIIILGQAAGTYRLSELLA----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLP- 227
Query: 706 VYQGASIIITLLLSTTPKLSLFVI--------IYRLLIKCLLPL---VINWQKILLILAI 754
GA + + TP +S ++ IY L+ L P V W+ +L+L +
Sbjct: 228 ---GA------MAAPTP-VSAYLHAAAMVKAGIY--LVARLAPGFADVPVWRPTVLVLGL 275
Query: 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIIT 814
++++G A+ Q++ K ++AY +++ +G + ++ I T L +GL
Sbjct: 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLT-VLVGIGTRDAAL-------AGL----- 322
Query: 815 YIFAILGA--------FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
A+L A F V+ ++ ++T T ++ GL +R P A++ + S+AG
Sbjct: 323 ---AMLLAHALFKAALFLVVGIIDHST--GTRDIRKLSGLGRRQPVLAVVAALAAASMAG 377
Query: 867 FPPTIGFYAKFFIFEKI-----FETQKIWLLLLIIMCSLI 901
PP +GF AK E + +L I++ S++
Sbjct: 378 LPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGIVLGSIL 417
|
Length = 965 |
| >gnl|CDD|177253 MTH00210, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 8e-05
Identities = 81/304 (26%), Positives = 148/304 (48%), Gaps = 37/304 (12%)
Query: 593 MIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISI 652
+++++ +N + +++G E + L +LI I +++AAIK ++ + ++ + +
Sbjct: 125 IVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIM 184
Query: 653 LYGITGTLELQSIFNVIKLNNINCSVLALSLLLII--VGLSFKLGISPFHMWVPDVYQGA 710
+ GTLE +I +++ N S+ + LLL I VG S +LG+ H W+PD +G
Sbjct: 185 ILKEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGL---HTWLPDAMEGP 241
Query: 711 SIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLIL-AIFSLIIGNVSAITQY 768
+ + L+ +T +F+II + PL + IL L A F+ +G V Q
Sbjct: 242 TPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVV----QN 297
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDS-GLFYIITYIF----AILGAF 823
+ K++IAYS+ + +G M+ ++ S S LF+++ + F L A
Sbjct: 298 DLKKVIAYSTCSQLGYMV------------MVCGISNYSTSLFHLMNHAFFKALLFLSAG 345
Query: 824 GVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
VI + DE D+ GL + P+ ++++I SL GFP GFY+K I E
Sbjct: 346 SVIHAVS-------DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE 398
Query: 882 KIFE 885
++
Sbjct: 399 LTYD 402
|
Length = 616 |
| >gnl|CDD|168619 PRK06588, PRK06588, putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 9e-05
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
++ L +I + + +S+ + LE M++ C++I + I + A +YF+ + SSG +
Sbjct: 56 LYCLSSIICVFAADFISMIISLEFMTIFACIIIFCDQLKI---KPARQYFLTHLFSSGLI 112
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
L G+++L T S+ + NN L + I+ G + WV +
Sbjct: 113 LIGMTLLIQTTSNTAFTSLTESV--NNFE-----LPAIFILAGCLINASAIFVNGWVVNC 165
Query: 707 YQGASII-ITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
Y AS I L+S T K++L +II +L + +IL I +I G V ++
Sbjct: 166 YPIASSSGIVYLISFTTKVTL-IIILKLF---------SGLEILKFFGISMIIYGLVFSL 215
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSI 789
+ N KR+I Y +++ +G +L +I
Sbjct: 216 IEKNLKRLICYLTVSQLGFILAAI 239
|
Length = 506 |
| >gnl|CDD|237155 PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-04
Identities = 46/188 (24%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
+NL+ +YL EL S++ +LI+ S A K ++ + ML G +LY +TG
Sbjct: 130 DNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG 189
Query: 659 TLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
+ ++ + + I S L + +++LI++G K PF++W+PD + + + L
Sbjct: 190 SFSIREMIA--NADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
Query: 718 LSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAY 776
S T K ++++ I + W + ++ + +L G+++A+ Q + K ++A+
Sbjct: 248 HSATMVKAGIYLVARFTPIFAGSQV---WFWTVTLVGLITLFWGSLNAVKQTDLKGILAF 304
Query: 777 SSIAHMGL 784
S+++ +GL
Sbjct: 305 STVSQLGL 312
|
Length = 800 |
| >gnl|CDD|214442 MTH00160, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-04
Identities = 53/294 (18%), Positives = 114/294 (38%), Gaps = 33/294 (11%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLM 328
+ L + + + ++ E L+ +I S +++K+FL +
Sbjct: 7 KLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQAL 66
Query: 329 GSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLP 388
S+++L S+I NI S + + +K+ P H W P
Sbjct: 67 ASIILLFSIILNMLNLMLFNNISS---------------MLINSSLLLKLGAAPFHFWFP 111
Query: 389 DAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448
+ +E + + + K+ P+ + +N II + ++S I ++
Sbjct: 112 EV-MEGLSWINCFILMTWQKI---------APLILLSYLINNNFIIIIIILSAIIGAIGG 161
Query: 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ 508
+ Q ++K++AYSSI H+G++ + + + + + LI S + +SI L+N+
Sbjct: 162 LNQTSLRKILAYSSINHLGWMLSSMMISENL--------WLIYFLIYSIISLSIILLFNK 213
Query: 509 MKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF 562
++ N + L+ LP GF+ +++II + N
Sbjct: 214 FNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNM 267
|
Length = 335 |
| >gnl|CDD|214454 MTH00198, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-04
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 40 FLINRIGAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSN 98
+L + + K A P H W PD EG PTP +ALI T I + + L S
Sbjct: 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTS----LVITSK 357
Query: 99 TALSIILFIGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVSAY 149
LS+ AI + +G G + Q IKR++AYS + +G++ +G+ Y
Sbjct: 358 LLLSV-----AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTY 404
|
Length = 607 |
| >gnl|CDD|214435 MTH00150, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 3e-04
Identities = 33/128 (25%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 671 LNNINCSVLALSLLLIIVGLSF--KLGISPFHMWVPDVY-----QGASIIITLLLSTTPK 723
++++ + ++ L ++V L+F KL + PFH+W+P + G+ I+ +LL K
Sbjct: 141 ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILL----K 196
Query: 724 LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMG 783
L + I+ +++ L + L+ L+++ ++ ++ + Q + K +IAYSS+ HM
Sbjct: 197 LGGYGILRMMMVFSLSSSS--FSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
Query: 784 LMLFSIIS 791
L+L ++S
Sbjct: 255 LVLAGVLS 262
|
Length = 417 |
| >gnl|CDD|214462 MTH00217, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-04
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 50 KSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILF 106
K + P H WLP + +E P A ++I A ++ G + R S PL E S +I
Sbjct: 219 KIPKIPFHIWLPQAHVEAPV-AGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQT 277
Query: 107 IGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFK 163
+ + + L Q D+KRIIAYS+++ +G +T+G+ + +IF ++ H
Sbjct: 278 LSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVS 337
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+ LF+ A + + H + I+ G+ MP+ I L+ +L+ P F
Sbjct: 338 SALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
Length = 482 |
| >gnl|CDD|214413 MTH00062, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 36/254 (14%)
Query: 635 YFILGILSSGF-MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
YF+ +L + +L + L + G+ FN + + L + +L + ++ K
Sbjct: 126 YFLGYLLLTSLPLLLCLLYLSLVNGS------FNFSDWGSDDSVSLIVYYVLSFMFIT-K 178
Query: 694 LGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKILLIL 752
+ + PFH W+P V+ AS +++ LS KL L + +YR + L +
Sbjct: 179 VPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGL-LGVYRF-CGFIFSGSFLG--YLFLC 234
Query: 753 AIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSC------D 806
+FS+ ++A ++ + KR +A+ S++H+ L+ + + + + F C
Sbjct: 235 CLFSVFF-LITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYCLGHGLSA 292
Query: 807 SGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
+F ++ + + G+ ++L + + L +I++ SL
Sbjct: 293 GLVFLLLWCFYEVSGSRNWVLLKSGINGS--------LVLR-------VIVVFSFLSLCS 337
Query: 867 FPPTIGFYAKFFIF 880
FPPTI F+ + F+
Sbjct: 338 FPPTIQFFCEVFLV 351
|
Length = 417 |
| >gnl|CDD|177193 MTH00135, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 4e-04
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFF 114
PLH WLP+ ++G + LI + A +I +++P +N L I L G +
Sbjct: 110 PLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP----TNPTLLITL--GLTSTLV 163
Query: 115 MGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHAFFKALLFLSA 170
G G+ Q +++I+AYS+++ LG+M + L S + + +MT + F S+
Sbjct: 164 GGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSS 223
Query: 171 GSIIINMKHNQDIRNMGGLY--KYMPITCITSLIGLLSLVGAPFFSGFYSK 219
I N K +T +T LI LLSL G P +GF K
Sbjct: 224 TKI-----------NTLATSWTKAPALTALTPLI-LLSLGGLPPLTGFMPK 262
|
Length = 347 |
| >gnl|CDD|177251 MTH00208, ND5, NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 5e-04
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILG-ILSSG 644
IIF+L +I+ S NNL +++G E + +LI+ ++ +A++ I I G
Sbjct: 145 IIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIG 204
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L+ +S+ + L I ++ N+ ++L +LL G S + G H W+P
Sbjct: 205 IILF-LSLSLINFNSWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFG---LHPWLP 260
Query: 705 DVYQGASIIITLLLSTTPKLSLFVIIYRLLIKC--LLPLVINWQKILLILAIFSLIIGNV 762
+G + + LL S+T + V LLI+ L+ + + LIL + +
Sbjct: 261 AAMEGPTPVSALLHSST----MVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAAS 316
Query: 763 SAITQYNFKRMIAYSSIAHMGLMLFSI 789
+AI+Q++ K++IAYS+ + +GLM+ +I
Sbjct: 317 TAISQHDIKKIIAYSTTSQLGLMVVAI 343
|
Length = 628 |
| >gnl|CDD|214411 MTH00044, ND4, NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 6e-04
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 586 IIFVLGQMIM-ISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG 644
II +L +I+ S L+ Y+ E + +LI +A + + + S
Sbjct: 100 IIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L + +Y + +L + + + L +++ + ++ + I+ K+ I FH+W+P
Sbjct: 160 PLLISLIAIYSSSSSLSI-PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLP 218
Query: 705 DVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVS 763
+ A + +++L+ KL + +I RL+ LP N IL++ + +I ++
Sbjct: 219 KAHVEAPVAGSMILAAILLKLGGYGLI-RLINLFSLPSANNISFILIVFCCWGALITSII 277
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISI 792
+ Q + K +IAYSS+ HM L+ I S
Sbjct: 278 CLRQTDLKALIAYSSVGHMSLVAAGIFSG 306
|
Length = 458 |
| >gnl|CDD|177193 MTH00135, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 6e-04
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 372 IAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML----KLGCYGLLRFSLPIFPDASY 427
+A A+KI + P+H WLP+ +G + ++L KL + L+ L I P
Sbjct: 100 LALALKIGLAPLHFWLPEV-----LQGLDLTTGLILSTWQKLAPFALI---LQIAPTNP- 150
Query: 428 YFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTL 471
L+ITL L S + + Q ++K++AYSSIAH+G++ L
Sbjct: 151 ---TLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
|
Length = 347 |
| >gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (101), Expect = 0.001
Identities = 75/338 (22%), Positives = 136/338 (40%), Gaps = 34/338 (10%)
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF------IGEF 551
M + L + + N ++ + F + + + +
Sbjct: 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFG 60
Query: 552 MIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMI--SGNNLLSIYLGLE 609
+I+LS F C+ ++ S+ ++ L +I L +++ S NLL Y+ E
Sbjct: 61 LILLS---FWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFE 117
Query: 610 LMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669
+ LI +A I + +S +L GI LY +G+L
Sbjct: 118 SSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSL-------SF 170
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV-----YQGASIIITLLLSTTPKL 724
L N S+ L L +I+ K+ + H+W+P G+ I+ +LL KL
Sbjct: 171 FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL----KL 226
Query: 725 SLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGL 784
+ ++ + L L N+ I + +++ +I ++ + Q + K +IAYSS+AHMGL
Sbjct: 227 GGYGLLRVMSFFSKLGLKFNY--IWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGL 284
Query: 785 ML-----FSIISIKTSHNNLIIFNSCDSGLFYIITYIF 817
+L FS + S +I C SGLF + I+
Sbjct: 285 VLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIY 322
|
Length = 445 |
| >gnl|CDD|214338 CHL00025, ndhF, NADH dehydrogenase subunit 5 | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.002
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 647 LYGISILYGITGTLELQSIF----NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMW 702
L GI Y ITG+ E + +F N+I N +N L L+ +G K P H+W
Sbjct: 190 LLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVW 249
Query: 703 VPDVYQGASIIITLLLSTTPKLSLFVIIYRLL-IKCLLPLVINWQKILLILAIFSLIIGN 761
+PD +G + I L+ + T + ++ RLL + ++P ++N I LI I + ++G
Sbjct: 250 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNL--ISLIGII-TALLGA 306
Query: 762 VSAITQYNFKRMIAYSSIAHMGLM 785
A+ Q + KR +AYS+++ +G M
Sbjct: 307 TLALAQKDIKRGLAYSTMSQLGYM 330
|
Length = 741 |
| >gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.002
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMI-TRMSPLFELSNTALSIILFIGAITA 112
P H W PD EG PT +AL+ AT+ G+F I ++ P+ ++L ++
Sbjct: 208 PFHMWAPDVYEGAPTITTALL--ATVPKIGVFSILVQIGPVTN-------VVLICAVLSI 258
Query: 113 FFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYT--------VSIFHLMTHAFFKA 164
+ + + Q IKR++AYS + +G++ G+ + ++ + I+ +M+ F
Sbjct: 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI 318
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+L L + I + GL + P+ +T + LS+ G P +GF SK
Sbjct: 319 ILSLKLTKGL--------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSK 365
|
Length = 460 |
| >gnl|CDD|214435 MTH00150, ND4, NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.003
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGI------FMITRMS 91
AFL+ K +P H WLP + +E P A +M+ AGI + I RM
Sbjct: 161 AFLV-------KLPMYPFHLWLPKAHVEAPV-------AGSMILAGILLKLGGYGILRMM 206
Query: 92 PLFELSNTALSIILFIGAITAFFMGLLGII----QNDIKRIIAYSTLSQLGYMTVGLGVS 147
+F LS+++ SI L ++ + G+L + Q+D+K +IAYS++ + + G+ +S
Sbjct: 207 MVFSLSSSSFSIFLISLSL---WGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGV-LS 262
Query: 148 AYTV----SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCI 198
+ ++ +++H F + LF A H++ + G+ P +
Sbjct: 263 NTSWGWVGALIMMVSHGFCSSGLFCLAN-YTYEKVHSRSLFLSKGMLMLYPSLSL 316
|
Length = 417 |
| >gnl|CDD|236008 PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.003
Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 28/259 (10%)
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L G+ L + GTL + N++ L L +I G + K P H+W+
Sbjct: 186 LLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLD 245
Query: 705 DVYQG---ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGN 761
+ +G ASI+ ++ T +V+I + L P+ + +L+++ + I +
Sbjct: 246 EAMEGPNPASILRNSVVVAT---GAWVLIKLQPVLALSPVALT---VLIVIGTVTAIGAS 299
Query: 762 VSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA--- 818
+ AI Q + KR ++YS+ A++GL+ I++ ++ L ++T+ A
Sbjct: 300 LVAIAQIDIKRALSYSTSAYLGLVF---IAVGLQQPDI--------ALLLLLTHAIAKAL 348
Query: 819 ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
+ + G IIL EL GL R P L ++ L P GF+A
Sbjct: 349 LFMSVGSIIL--TTITQDLTELG---GLWSRMPATTLAFLVGSAGLVALLPLGGFWALLR 403
Query: 879 IFEKIFETQKIWLLLLIIM 897
+ + ++ + +L+++
Sbjct: 404 LADGLWAVSPWLVGVLLLV 422
|
Length = 613 |
| >gnl|CDD|214399 MTH00014, ND4, NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.004
Identities = 80/402 (19%), Positives = 150/402 (37%), Gaps = 42/402 (10%)
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
+ + +F+L N + + + L TAL+ A++
Sbjct: 22 SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFK 81
Query: 580 LCLSKN---------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSE 630
+ + +I L ++ S +NLL Y+ E + LI +
Sbjct: 82 IFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQ 141
Query: 631 AAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGL 690
A+ I + +S +L I +++ +L + + + ++ L L+ I+
Sbjct: 142 ASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMS----SMEPPSIYLMNLWWLITILAF 197
Query: 691 SFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750
K+ + H+W+P + A + +++L+ + L + Y LL L + IN
Sbjct: 198 MVKMPLYTVHLWLPKAHVEAPVAGSMILAG---ILLKLGGYGLLRMSSLFMHINKSLSAP 254
Query: 751 ILAI--FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKT-----SHNNLIIFN 803
+I +I ++ I Q + K +IAYSS+ HMGLM I+S + + +I
Sbjct: 255 FSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
Query: 804 SCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFS 863
C S LF L N T T +F+ + + + M F+ S
Sbjct: 315 LCSSALF-----------------ALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLS 357
Query: 864 LA--GFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
A PP+I ++ + I + +LL I L A
Sbjct: 358 AANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAA 399
|
Length = 452 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1178 | |||
| COG1008 | 497 | NuoM NADH:ubiquinone oxidoreductase subunit 4 (cha | 100.0 | |
| MTH00226 | 505 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00204 | 485 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00217 | 482 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK02546 | 525 | NAD(P)H-quinone oxidoreductase subunit 4; Provisio | 100.0 | |
| PRK12561 | 504 | NAD(P)H-quinone oxidoreductase subunit 4; Provisio | 100.0 | |
| PRK06473 | 500 | NAD(P)H-quinone oxidoreductase subunit D4; Validat | 100.0 | |
| CHL00011 | 498 | ndhD NADH dehydrogenase subunit 4 | 100.0 | |
| PRK07363 | 501 | NAD(P)H-quinone oxidoreductase subunit M; Validate | 100.0 | |
| MTH00206 | 450 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00150 | 417 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00044 | 458 | ND4 NADH dehydrogenase subunit 4; Validated | 100.0 | |
| PRK05846 | 497 | NADH:ubiquinone oxidoreductase subunit M; Reviewed | 100.0 | |
| TIGR01972 | 479 | NDH_I_M proton-translocating NADH-quinone oxidored | 100.0 | |
| PRK12649 | 789 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| MTH00014 | 452 | ND4 NADH dehydrogenase subunit 4; Validated | 100.0 | |
| PRK07691 | 496 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| TIGR00944 | 463 | 2a6301s04 Multicomponent K+:H+antiporter. | 100.0 | |
| MTH00124 | 457 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK08676 | 485 | hydrogenase membrane subunit; Validated | 100.0 | |
| TIGR00940 | 793 | 2a6301s01 Tmonovalent cation:proton antiporter. Th | 100.0 | |
| PRK12665 | 521 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK12667 | 520 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK08375 | 487 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00205 | 448 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK08377 | 494 | NADH dehydrogenase subunit N; Validated | 100.0 | |
| PRK12644 | 965 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK06277 | 478 | hydrogenase subunit F; Validated | 100.0 | |
| MTH00127 | 459 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12663 | 497 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK06521 | 667 | hydrogenase 4 subunit B; Validated | 100.0 | |
| MTH00068 | 458 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00110 | 459 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12662 | 492 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| KOG4845|consensus | 452 | 100.0 | ||
| MTH00163 | 445 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12666 | 528 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK12645 | 800 | monovalent cation/H+ antiporter subunit A; Reviewe | 100.0 | |
| PRK12648 | 948 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK08376 | 521 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| COG1007 | 475 | NuoN NADH:ubiquinone oxidoreductase subunit 2 (cha | 100.0 | |
| PRK06458 | 490 | hydrogenase 4 subunit F; Validated | 100.0 | |
| PRK12650 | 962 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK12646 | 800 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK12647 | 761 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK08668 | 610 | NADH dehydrogenase subunit M; Validated | 100.0 | |
| COG0651 | 504 | HyfB Formate hydrogenlyase subunit 3/Multisubunit | 100.0 | |
| PRK06525 | 479 | hydrogenase 4 subunit D; Validated | 100.0 | |
| COG1009 | 606 | NuoL NADH:ubiquinone oxidoreductase subunit 5 (cha | 100.0 | |
| TIGR01960 | 606 | ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 fam | 100.0 | |
| TIGR01770 | 468 | NDH_I_N proton-translocating NADH-quinone oxidored | 100.0 | |
| PRK02504 | 513 | NAD(P)H-quinone oxidoreductase subunit 2; Provisio | 100.0 | |
| PRK08667 | 644 | hydrogenase membrane subunit; Validated | 100.0 | |
| PRK07390 | 613 | NAD(P)H-quinone oxidoreductase subunit F; Validate | 100.0 | |
| MTH00062 | 417 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK07376 | 673 | NAD(P)H-quinone oxidoreductase subunit F; Validate | 100.0 | |
| CHL00049 | 494 | ndhB NADH dehydrogenase subunit 2 | 100.0 | |
| PRK08042 | 593 | formate hydrogenlyase subunit 3; Reviewed | 100.0 | |
| PRK06591 | 432 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00208 | 628 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00020 | 610 | ND5 NADH dehydrogenase subunit 5; Reviewed | 100.0 | |
| PRK12668 | 581 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| CHL00025 | 741 | ndhF NADH dehydrogenase subunit 5 | 100.0 | |
| PRK06590 | 624 | NADH:ubiquinone oxidoreductase subunit L; Reviewed | 100.0 | |
| PRK05777 | 476 | NADH:ubiquinone oxidoreductase subunit N; Provisio | 100.0 | |
| TIGR01974 | 617 | NDH_I_L proton-translocating NADH-quinone oxidored | 100.0 | |
| MTH00211 | 597 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00004 | 602 | ND5 NADH dehydrogenase subunit 5; Validated | 100.0 | |
| MTH00165 | 573 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00210 | 616 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| COG1007 | 475 | NuoN NADH:ubiquinone oxidoreductase subunit 2 (cha | 100.0 | |
| MTH00199 | 460 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00032 | 669 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00108 | 602 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| PRK06588 | 506 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00209 | 564 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00151 | 565 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| PRK06589 | 489 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00137 | 611 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00066 | 598 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00207 | 572 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00094 | 403 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK06459 | 585 | hydrogenase 4 subunit B; Validated | 100.0 | |
| MTH00095 | 527 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| PRK07234 | 470 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00196 | 365 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| KOG2951|consensus | 279 | 100.0 | ||
| PRK10757 | 267 | inositol monophosphatase; Provisional | 100.0 | |
| MTH00063 | 522 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| COG0483 | 260 | SuhB Archaeal fructose-1,6-bisphosphatase and rela | 100.0 | |
| PLN02737 | 363 | inositol monophosphatase family protein | 100.0 | |
| PLN02553 | 270 | inositol-phosphate phosphatase | 100.0 | |
| MTH00198 | 607 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PLN02911 | 296 | inositol-phosphate phosphatase | 100.0 | |
| TIGR02067 | 251 | his_9_proposed histidinol-phosphate phosphatase Hi | 100.0 | |
| TIGR01770 | 468 | NDH_I_N proton-translocating NADH-quinone oxidored | 100.0 | |
| cd01641 | 248 | Bacterial_IMPase_like_1 Predominantly bacterial fa | 100.0 | |
| PRK12664 | 527 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK02504 | 513 | NAD(P)H-quinone oxidoreductase subunit 2; Provisio | 100.0 | |
| cd01639 | 244 | IMPase IMPase, inositol monophosphatase and relate | 100.0 | |
| PRK12676 | 263 | bifunctional inositol-1 monophosphatase/fructose-1 | 100.0 | |
| CHL00049 | 494 | ndhB NADH dehydrogenase subunit 2 | 100.0 | |
| PRK05777 | 476 | NADH:ubiquinone oxidoreductase subunit N; Provisio | 100.0 | |
| cd01643 | 242 | Bacterial_IMPase_like_2 Bacterial family of Mg++ d | 100.0 | |
| COG1008 | 497 | NuoM NADH:ubiquinone oxidoreductase subunit 4 (cha | 100.0 | |
| MTH00199 | 460 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| cd01517 | 274 | PAP_phosphatase PAP-phosphatase_like domains. PAP- | 100.0 | |
| PF00459 | 270 | Inositol_P: Inositol monophosphatase family; Inter | 100.0 | |
| PRK08377 | 494 | NADH dehydrogenase subunit N; Validated | 100.0 | |
| PRK12667 | 520 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| cd01515 | 257 | Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase | 100.0 | |
| TIGR00944 | 463 | 2a6301s04 Multicomponent K+:H+antiporter. | 100.0 | |
| MTH00196 | 365 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PRK08168 | 516 | NADH dehydrogenase subunit L; Provisional | 100.0 | |
| PRK07691 | 496 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK06277 | 478 | hydrogenase subunit F; Validated | 100.0 | |
| MTH00226 | 505 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00204 | 485 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK06521 | 667 | hydrogenase 4 subunit B; Validated | 100.0 | |
| PRK08376 | 521 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00217 | 482 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12663 | 497 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00150 | 417 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00014 | 452 | ND4 NADH dehydrogenase subunit 4; Validated | 100.0 | |
| TIGR01331 | 249 | bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, | 100.0 | |
| PRK06458 | 490 | hydrogenase 4 subunit F; Validated | 100.0 | |
| PRK12662 | 492 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK02546 | 525 | NAD(P)H-quinone oxidoreductase subunit 4; Provisio | 100.0 | |
| cd01637 | 238 | IMPase_like Inositol-monophosphatase-like domains. | 100.0 | |
| PRK08601 | 509 | NADH dehydrogenase subunit 5; Validated | 100.0 | |
| PF00361 | 270 | Oxidored_q1: NADH-Ubiquinone/plastoquinone (comple | 100.0 | |
| PRK08676 | 485 | hydrogenase membrane subunit; Validated | 100.0 | |
| PRK08375 | 487 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00198 | 607 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| TIGR01330 | 353 | bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, | 100.0 | |
| PRK12561 | 504 | NAD(P)H-quinone oxidoreductase subunit 4; Provisio | 100.0 | |
| cd01638 | 242 | CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate | 100.0 | |
| PRK12665 | 521 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00044 | 458 | ND4 NADH dehydrogenase subunit 4; Validated | 100.0 | |
| PRK10931 | 246 | adenosine-3'(2'),5'-bisphosphate nucleotidase; Pro | 100.0 | |
| CHL00011 | 498 | ndhD NADH dehydrogenase subunit 4 | 100.0 | |
| TIGR01972 | 479 | NDH_I_M proton-translocating NADH-quinone oxidored | 100.0 | |
| COG0651 | 504 | HyfB Formate hydrogenlyase subunit 3/Multisubunit | 100.0 | |
| PRK05846 | 497 | NADH:ubiquinone oxidoreductase subunit M; Reviewed | 100.0 | |
| MTH00205 | 448 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00124 | 457 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| MTH00206 | 450 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12666 | 528 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK06473 | 500 | NAD(P)H-quinone oxidoreductase subunit D4; Validat | 100.0 | |
| PRK12668 | 581 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00068 | 458 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK08667 | 644 | hydrogenase membrane subunit; Validated | 100.0 | |
| MTH00110 | 459 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12649 | 789 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK12644 | 965 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| TIGR00940 | 793 | 2a6301s01 Tmonovalent cation:proton antiporter. Th | 100.0 | |
| TIGR01960 | 606 | ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 fam | 100.0 | |
| MTH00112 | 346 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PRK07363 | 501 | NAD(P)H-quinone oxidoreductase subunit M; Validate | 100.0 | |
| MTH00127 | 459 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK06588 | 506 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00041 | 349 | ND2 NADH dehydrogenase subunit 2; Validated | 100.0 | |
| PRK07390 | 613 | NAD(P)H-quinone oxidoreductase subunit F; Validate | 100.0 | |
| MTH00144 | 328 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00163 | 445 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK07376 | 673 | NAD(P)H-quinone oxidoreductase subunit F; Validate | 100.0 | |
| PRK14076 | 569 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 100.0 | |
| PRK08668 | 610 | NADH dehydrogenase subunit M; Validated | 100.0 | |
| PRK12650 | 962 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK06525 | 479 | hydrogenase 4 subunit D; Validated | 100.0 | |
| MTH00062 | 417 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| CHL00025 | 741 | ndhF NADH dehydrogenase subunit 5 | 100.0 | |
| PRK12645 | 800 | monovalent cation/H+ antiporter subunit A; Reviewe | 100.0 | |
| PRK12648 | 948 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| cd01640 | 293 | IPPase IPPase; Inositol polyphosphate-1-phosphatas | 100.0 | |
| PRK12646 | 800 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK12647 | 761 | putative monovalent cation/H+ antiporter subunit A | 100.0 | |
| PRK06591 | 432 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00200 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00208 | 628 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00032 | 669 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| COG1218 | 276 | CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) | 100.0 | |
| MTH00070 | 346 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PRK08042 | 593 | formate hydrogenlyase subunit 3; Reviewed | 100.0 | |
| MTH00105 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00020 | 610 | ND5 NADH dehydrogenase subunit 5; Reviewed | 100.0 | |
| MTH00160 | 335 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PRK06590 | 624 | NADH:ubiquinone oxidoreductase subunit L; Reviewed | 100.0 | |
| MTH00004 | 602 | ND5 NADH dehydrogenase subunit 5; Validated | 100.0 | |
| PRK06459 | 585 | hydrogenase 4 subunit B; Validated | 100.0 | |
| MTH00210 | 616 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00135 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00108 | 602 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| TIGR01974 | 617 | NDH_I_L proton-translocating NADH-quinone oxidored | 100.0 | |
| PF00361 | 270 | Oxidored_q1: NADH-Ubiquinone/plastoquinone (comple | 100.0 | |
| MTH00112 | 346 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00066 | 598 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00041 | 349 | ND2 NADH dehydrogenase subunit 2; Validated | 100.0 | |
| MTH00211 | 597 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00209 | 564 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00197 | 323 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| PRK06589 | 489 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00151 | 565 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00011 | 330 | ND2 NADH dehydrogenase subunit 2; Validated | 100.0 | |
| MTH00105 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00135 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00070 | 346 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00165 | 573 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00137 | 611 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00200 | 347 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| COG1009 | 606 | NuoL NADH:ubiquinone oxidoreductase subunit 5 (cha | 100.0 | |
| MTH00144 | 328 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| cd01642 | 244 | Arch_FBPase_2 Putative fructose-1,6-bisphosphatase | 100.0 | |
| MTH00094 | 403 | ND4 NADH dehydrogenase subunit 4; Provisional | 100.0 | |
| PRK12664 | 527 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| PRK07234 | 470 | putative monovalent cation/H+ antiporter subunit D | 100.0 | |
| MTH00207 | 572 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00095 | 527 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00011 | 330 | ND2 NADH dehydrogenase subunit 2; Validated | 100.0 | |
| MTH00160 | 335 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| MTH00063 | 522 | ND5 NADH dehydrogenase subunit 5; Provisional | 100.0 | |
| MTH00197 | 323 | ND2 NADH dehydrogenase subunit 2; Provisional | 100.0 | |
| KOG4845|consensus | 452 | 100.0 | ||
| KOG1528|consensus | 351 | 100.0 | ||
| cd01636 | 184 | FIG FIG, FBPase/IMPase/glpX-like domain. A superfa | 100.0 | |
| PRK08168 | 516 | NADH dehydrogenase subunit L; Provisional | 100.0 | |
| PRK08601 | 509 | NADH dehydrogenase subunit 5; Validated | 99.97 | |
| KOG4668|consensus | 355 | 99.95 | ||
| MTH00091 | 273 | ND2 NADH dehydrogenase subunit 2; Provisional | 99.92 | |
| KOG3099|consensus | 340 | 99.92 | ||
| KOG3853|consensus | 350 | 99.92 | ||
| KOG4668|consensus | 355 | 99.9 | ||
| MTH00091 | 273 | ND2 NADH dehydrogenase subunit 2; Provisional | 99.87 | |
| MTH00059 | 289 | ND2 NADH dehydrogenase subunit 2; Provisional | 99.81 | |
| PRK09293 | 327 | fructose-1,6-bisphosphatase; Provisional | 99.75 | |
| cd00354 | 315 | FBPase Fructose-1,6-bisphosphatase, an enzyme that | 99.72 | |
| MTH00059 | 289 | ND2 NADH dehydrogenase subunit 2; Provisional | 99.66 | |
| PLN02262 | 340 | fructose-1,6-bisphosphatase | 99.56 | |
| PRK12415 | 322 | fructose 1,6-bisphosphatase II; Reviewed | 99.39 | |
| PLN02462 | 304 | sedoheptulose-1,7-bisphosphatase | 99.36 | |
| PLN02628 | 351 | fructose-1,6-bisphosphatase family protein | 99.36 | |
| PF00316 | 324 | FBPase: Fructose-1-6-bisphosphatase; InterPro: IPR | 99.29 | |
| COG0158 | 326 | Fbp Fructose-1,6-bisphosphatase [Carbohydrate tran | 99.26 | |
| PLN02542 | 412 | fructose-1,6-bisphosphatase | 99.21 | |
| KOG1458|consensus | 343 | 98.77 | ||
| PRK09479 | 319 | glpX fructose 1,6-bisphosphatase II; Reviewed | 96.57 | |
| PF10125 | 219 | NADHdeh_related: NADH dehydrogenase I, subunit N r | 96.54 | |
| cd01516 | 309 | FBPase_glpX Bacterial fructose-1,6-bisphosphatase, | 96.49 | |
| TIGR00330 | 321 | glpX fructose-1,6-bisphosphatase, class II. In E. | 96.26 | |
| PRK12388 | 321 | fructose-1,6-bisphosphatase II-like protein; Revie | 96.2 | |
| PF03320 | 309 | FBPase_glpX: Bacterial fructose-1,6-bisphosphatase | 94.34 | |
| COG4078 | 221 | Predicted membrane protein [Function unknown] | 94.28 | |
| COG1494 | 332 | GlpX Fructose-1,6-bisphosphatase/sedoheptulose 1,7 | 94.28 | |
| PF00662 | 62 | Oxidored_q1_N: NADH-Ubiquinone oxidoreductase (com | 93.18 | |
| PF10125 | 219 | NADHdeh_related: NADH dehydrogenase I, subunit N r | 91.52 |
| >COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-75 Score=649.53 Aligned_cols=399 Identities=49% Similarity=0.903 Sum_probs=377.5
Q ss_pred cchhhhHHHHHHHhhhhccccccccccC------CccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhh-hhhh
Q psy5224 192 YMPITCITSLIGLLSLVGAPFFSGFYSK------DKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKK 264 (1178)
Q Consensus 192 ~~~~~~~~~~l~llsl~glp~~~gf~~k------~~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~-~~~~ 264 (1178)
.|+.+.....+.+. ..+..+.+|+.. .|+.+|+|.+|++|++++|++|..++++++++++++++.++ +.++
T Consensus 30 ~r~~al~~~~~~~~--l~l~~~~~Fd~s~~~~qf~e~~~Wi~~lGl~y~vgvDGiS~~lvlLt~~l~~lail~sw~~i~~ 107 (497)
T COG1008 30 ARWIALVVSLATLL--LSLYLFAGFDISSPGFQFVESYPWIPQLGLSYHLGVDGISLLLVLLTALLTLLAILASWREIEK 107 (497)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhcCCCCCCeEEEEEecchhhcCceEEEeccHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 45566666666655 556666677654 67789999999999999999999999999999999999994 5677
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q psy5224 265 KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYIS 344 (1178)
Q Consensus 265 ~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~ 344 (1178)
|.+.||.++++++++++|+|.+.|++.||+|||.+++|+|++|+.||+++|.+|+.|+++|+..||.++|++....|..+
T Consensus 108 r~~~f~~~~L~le~~~iGvF~a~DllLFyvFwE~~LIPmy~iIgiwGg~~R~yAa~KFflYT~~gsl~mLla~~~~~~~~ 187 (497)
T COG1008 108 RPKLFYALFLLLEGGVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGKRRIYAATKFFLYTLLGSLFMLLAFLYLYFLT 187 (497)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999988888877
Q ss_pred hh-hHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhch
Q psy5224 345 NK-SFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423 (1178)
Q Consensus 345 ~~-s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~ 423 (1178)
|. |||+.++.+...+...+.+.++.+++||++|+|+||+|.|+||+|+|||+++|.+++|++.|+|.||++|+..+++|
T Consensus 188 g~~TFd~~~l~~~~~~~~~q~~L~~~f~iaFaVK~P~~P~HTWLPDAh~eApt~gSViLaGiLlKmG~YGllRf~L~lfP 267 (497)
T COG1008 188 GSPTFDILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVILAGILLKMGGYGLLRFSLPLFP 267 (497)
T ss_pred CCCceeHHHHHhccCChHHHHHHHHHHHHHHHhccCCccccccCChhhccCCCcHHHHHHHHHHHhcchHhhhhccccCC
Confidence 74 89999998887888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG 503 (1178)
Q Consensus 424 ~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g 503 (1178)
+...++.+++..+|+++++||++.|++|+|+||++|||||+|||++++|+++.|..|..|+++||++|++..+++|+++|
T Consensus 268 ~as~~fap~l~~L~visIiY~al~A~aQ~diKrliAYSSiSHMGfV~lgifs~~~~g~~GAv~QM~sHGlisa~LFl~vG 347 (497)
T COG1008 268 DASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVG 347 (497)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhh
Q psy5224 504 FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLS 583 (1178)
Q Consensus 504 ~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~ 583 (1178)
.+|+|+|||++++++|+.|++|.++..+.++.++..|+|+++||++|++++.+.++.+++.++++.++.+++++|.++++
T Consensus 348 ~iy~r~hTr~i~~~GGl~~~mP~~aa~~~~~~mAs~glPG~sgFvgEFlil~G~f~~~~~~~~la~~g~iltA~Y~L~~~ 427 (497)
T COG1008 348 VLYERTHTRDIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFPWVAFLAAFGLILTAVYMLWMY 427 (497)
T ss_pred HHHHhhcchhHHHhCCHHhhChHHHHHHHHHHHHhcCCCccchHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhh
Q psy5224 584 KNIIFVLGQ 592 (1178)
Q Consensus 584 ~~~~~g~~~ 592 (1178)
||.+||+..
T Consensus 428 ~rv~fG~~~ 436 (497)
T COG1008 428 QRVFFGPLK 436 (497)
T ss_pred HHHHcCCcc
Confidence 999999654
|
|
| >MTH00226 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-63 Score=584.51 Aligned_cols=398 Identities=38% Similarity=0.710 Sum_probs=351.7
Q ss_pred ccchhhhHHHHHHHhhhhccccccccccC-----Cccchhccc--------ccchhhhccchhHhHHHHHHHHHHHHHHH
Q psy5224 191 KYMPITCITSLIGLLSLVGAPFFSGFYSK-----DKKKIWIDY--------FNIYYFLGIDGLSLWFIPLTAFITLIIIL 257 (1178)
Q Consensus 191 ~~~~~~~~~~~l~llsl~glp~~~gf~~k-----~~~~~w~~~--------~~i~~~l~~D~ls~~~~~l~~~~~~~~~~ 257 (1178)
..|........+.++ ..+..+..|+.. .++.+|++. +++++.+++|++|.+++++++++.+++.+
T Consensus 43 ~~r~~~l~~~~~~l~--l~~~~~~~f~~~~~~q~~~~~~wi~~~~~~~~~~~~i~~~l~vDgls~~~~lLt~~l~~~~~l 120 (505)
T MTH00226 43 SLKRIALFWSFISLI--STIILWLSLDQEGGFTPLMDIDWIEGPEKIIPIIMGGPLVFAVDGISIYFIILTGFIVPCSIL 120 (505)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHcCCCCCceeEEeecccccccccccccCcceEEEEecHHHHHHHHHHHHHHHHHHH
Confidence 345555555555444 333344455432 355689886 78999999999999999999999988888
Q ss_pred hhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHH
Q psy5224 258 ISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLI 335 (1178)
Q Consensus 258 ~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~ 335 (1178)
++.. .+++.++|+.++++++.++++++.++|+++||++||++++|+|.+++.|+++ +|.+|++||++++.+||.++++
T Consensus 121 ~s~~~~~~~~~~f~~l~l~l~~~~~g~f~s~dl~~fyif~E~~lip~y~LI~~~g~~~~~~~Aa~k~~iyt~~gS~~lL~ 200 (505)
T MTH00226 121 ISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLL 200 (505)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8743 3445567899999999999999999999999999999999999999999864 5689999999999999999999
Q ss_pred HHHHHHHHhhhhHhhHHhhhhh--hhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHH
Q psy5224 336 SMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYG 413 (1178)
Q Consensus 336 ~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~ 413 (1178)
|+..+|..+| ++|+.++.+.. .+...+.+.+.++++||++|+|++|||.|+||+|+|||+|++++++|++.|+|.|+
T Consensus 201 gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~igf~vK~~lfPfH~WLPdah~eAPt~~S~lLagvl~K~G~yg 279 (505)
T MTH00226 201 CLFSLYNIHG-TTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYG 279 (505)
T ss_pred HHHHHHHhcC-CCCHHHHHhhhhcccchhHHHHHHHHHHHHHHHhCccccccccchhhCcCChHHHHHHHHHHHHHHHHH
Confidence 9999988777 89888775432 12334455666788999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Q psy5224 414 LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHAL 493 (1178)
Q Consensus 414 l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l 493 (1178)
++|+..+.+|.....+.+++.++|++|+++|++.|++|+|+||++|||||+|||++++++..+++.+..++++|+++|++
T Consensus 280 llR~~~~~~~~~~~~~~~~l~~lg~isii~gal~Al~Q~DlKrllAYSSIshmG~illgi~~~~~~g~~gal~~mi~Hgl 359 (505)
T MTH00226 280 LVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGI 359 (505)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99998888876666677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573 (1178)
Q Consensus 494 ~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ 573 (1178)
.|+++|+++|.+++|+|+|++++++|+.+++|.++..+.++.++++|+||++||++|++++.++++.+++..+++.++++
T Consensus 360 ~k~~LFl~~g~i~~~~gtr~i~~l~GL~~~~P~~~~~~~i~~la~~GlPp~~GF~~e~~il~~~~~~~~~~~~~~~~~~i 439 (505)
T MTH00226 360 VSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVI 439 (505)
T ss_pred HHHHHHHHHHHHHHhcCcchHHHhcChHhHhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877788899999
Q ss_pred HHHHHHhhhhhhhhhhhh
Q psy5224 574 FSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 574 ls~~y~l~~~~~~~~g~~ 591 (1178)
++++|++|.+++.++|+.
T Consensus 440 lsa~Y~l~~~~~~~~G~~ 457 (505)
T MTH00226 440 LSAVYSFYFANRVTFGAP 457 (505)
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 999999999999999864
|
|
| >MTH00204 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-61 Score=573.56 Aligned_cols=396 Identities=43% Similarity=0.757 Sum_probs=344.6
Q ss_pred chhhhHHHHHHHhhhhccccccccccC-----Cccchhccccc--chh---hhccchhHhHHHHHHHHHHHHHHHhhhh-
Q psy5224 193 MPITCITSLIGLLSLVGAPFFSGFYSK-----DKKKIWIDYFN--IYY---FLGIDGLSLWFIPLTAFITLIIILISLD- 261 (1178)
Q Consensus 193 ~~~~~~~~~l~llsl~glp~~~gf~~k-----~~~~~w~~~~~--i~~---~l~~D~ls~~~~~l~~~~~~~~~~~~~~- 261 (1178)
|+.......+.++ ..+..+..|... .+..+|.++++ +++ .+++|++|..+..++.++++++.+++.+
T Consensus 29 ~~~~l~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~i~~~~~~l~vD~ls~~~~~l~~~v~~~~~l~~~~~ 106 (485)
T MTH00204 29 KKRALEWSLAILF--STLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKS 106 (485)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHhCCCCCeeEEEeecccccccccccccceEEEEchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4455545544444 333333344322 34457987544 444 4689999999999999999888888743
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHH
Q psy5224 262 IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYL 340 (1178)
Q Consensus 262 ~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~ 340 (1178)
.+++.++|+.++++...++++++.++|++++|++||++++|+|.|++.|+++ +|.+|++||++++.+||.++|+|+.++
T Consensus 107 ~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~fyvf~E~~~i~~~~Li~~~g~~~~~~~Aa~ky~i~~~~gs~~~L~gi~~l 186 (485)
T MTH00204 107 IKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186 (485)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567999999999999999999999999999999999999999998865 578999999999999999999999999
Q ss_pred HHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 341 YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLP 420 (1178)
Q Consensus 341 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~ 420 (1178)
|..+| ++|+.++.+...+...+.+.+..+++||++|+|++|||.|+||+|+|||++++++++|++.|+|.|+++|+..+
T Consensus 187 y~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~~gf~~K~~~~PfH~WLPda~~~APt~~salLag~l~K~g~y~l~R~~~~ 265 (485)
T MTH00204 187 YSITG-TTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWP 265 (485)
T ss_pred HHHCC-CCcHHHHHhhhcchhHHHHHHHHHHHHHHHHcCcccchhhhhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887 89888775433333334455567789999999999999999999999999999999999999999999999888
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 421 IFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500 (1178)
Q Consensus 421 ~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~ 500 (1178)
.+|+....+.+++.++|++|+++|++.|++|+|+||++|||||+|+|++++++..++..+..++++|+++|++.|+++|+
T Consensus 266 ~~~~~~~~~~~~i~~l~~~s~~~g~l~al~Q~dlKrllAYSSIsh~G~i~~gl~~~~~~g~~ga~~~~i~H~l~k~~lF~ 345 (485)
T MTH00204 266 LFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFI 345 (485)
T ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876556677888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Q psy5224 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580 (1178)
Q Consensus 501 ~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l 580 (1178)
++|.+++++|+|++++++|+.+++|.++.++.++.++++|+||++||++|++++.++++.+.+..++..+++++++.|++
T Consensus 346 ~~g~i~~~~~t~~i~~l~Gl~~~~P~~~~~~~i~~ls~~GiPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l 425 (485)
T MTH00204 346 AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSL 425 (485)
T ss_pred HHHHHHHhhcceeHHhhcChHHHhHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887777788899999999999
Q ss_pred hhhhhhhhhhh
Q psy5224 581 CLSKNIIFVLG 591 (1178)
Q Consensus 581 ~~~~~~~~g~~ 591 (1178)
|.++++++|+.
T Consensus 426 ~~~~~~~~g~~ 436 (485)
T MTH00204 426 YLYNRISFGGG 436 (485)
T ss_pred HHHHHHHcCCC
Confidence 99999999864
|
|
| >MTH00217 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-61 Score=569.87 Aligned_cols=370 Identities=45% Similarity=0.812 Sum_probs=335.5
Q ss_pred ccchhcccccc---hhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 221 KKKIWIDYFNI---YYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 221 ~~~~w~~~~~i---~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
++.+|.+.++. ++.+++|++|.++..++.++++++.+++.+ .+++.++|+.++++...++++++.|+|++++|++|
T Consensus 59 ~~~~w~~~~~~~~~~~~~~vD~ls~~~~~l~~~~~~~~~l~~~~~~~~~~~~f~~l~ll~~~~~~g~f~s~dl~~fyv~~ 138 (482)
T MTH00217 59 KKFEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILF 138 (482)
T ss_pred EeeccccccCcccceEEEEEcHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34578887654 567889999999999999999888888743 33445678999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (1178)
|++++++|.++..||++ +|.+|++||++++.+||.++|+|+.++|..+| ++|+.++.+...+...+.+.+.++++||+
T Consensus 139 E~~~i~~~~Li~~~g~~~~~~~A~~ky~i~~~~gs~~lL~gi~~ly~~~g-t~~~~~l~~~~~~~~~~~~~~~~~~~gf~ 217 (482)
T MTH00217 139 EGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAG-TTDYQALCCLKIEKELQYFIFLGFFLSLA 217 (482)
T ss_pred HHHHHHHHhheeeCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHhhhcchhhHHHHHHHHHHHHH
Confidence 99999999999998865 57899999999999999999999999998887 88888775433233334456677889999
Q ss_pred hhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
+|+|++|||.|+||+|+|||++++++++|++.|+|.|+++|+..+.+|+....+.+++.++|++|+++|++.|++|+|+|
T Consensus 218 ~K~~l~PfH~WlPda~~~APt~~S~llagvl~K~g~ygl~R~~~~~~~~~~~~~~~~l~~l~~~s~i~g~~~al~Q~dlK 297 (482)
T MTH00217 218 IKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLK 297 (482)
T ss_pred HHhcccccceeCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999987888776556677889999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFS 535 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ 535 (1178)
|++|||||+|+|++++|++.++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++.++.++.
T Consensus 298 rllAYSSIshmG~i~lgl~~~~~~g~~gal~~~i~H~~~~~~lF~~~g~l~~~~~t~~i~~l~Gl~~~~P~~~~~~~i~~ 377 (482)
T MTH00217 298 RIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLV 377 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeHHHhcCHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++++|+||+.||++|++++.++.+.+++...++.+++++++.|++|.++++++|+.
T Consensus 378 ls~~GlPp~~gF~~k~~il~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 433 (482)
T MTH00217 378 LANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAP 433 (482)
T ss_pred HHHhhhhhcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999988877788889999999999999999999874
|
|
| >PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-60 Score=572.47 Aligned_cols=371 Identities=35% Similarity=0.634 Sum_probs=334.7
Q ss_pred CccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 220 DKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 220 ~~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
.+..+|.|++++++.+++|++|..+.++++++++++.+++++.+++.++||.+++++..++++++.|+|++++|++||++
T Consensus 68 ~~~~~w~~~~gi~~~l~~D~ls~~~~ll~~~v~~~~~l~s~~~~~~~~~f~~l~l~~~~g~~~~~~s~dl~~~yv~~El~ 147 (525)
T PRK02546 68 VESYSWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELE 147 (525)
T ss_pred EEeeccccccCceEEEecchHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34568999999999899999999999999999999999986555556679999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHH--HHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhh
Q psy5224 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL--YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K 377 (1178)
++++|.++..|+++++.+|++||++++.+||.++|+|+..+ |..+| ++|+.++.+...+...+.+.+.++++||++|
T Consensus 148 ~l~~~~Li~~~~~~~~~~Aa~ky~i~~~~gs~~lL~gi~~l~~~~~~g-s~~~~~l~~~~~~~~~~~~~~~~~l~gf~~K 226 (525)
T PRK02546 148 LIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDTP-TFDMTALAAKDFGLGFQLLCYAGLLIAYGVK 226 (525)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCCHHHHHhhccchhhHHHHHHHHHHHHHHh
Confidence 99999999999988889999999999999999999998644 33344 8888777543222233445566778899999
Q ss_pred cCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q psy5224 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457 (1178)
Q Consensus 378 ~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krl 457 (1178)
+|++|||.|+||+|+++|+++++++||++.|+|.|+++|+..+.+|+....+.+++.++|++|+++|++.|++|+|+||+
T Consensus 227 ~~~fPfH~WLPda~~~ap~~vsa~Lsgv~~K~g~y~l~R~~~~~~~~~~~~~~~~l~~lg~~s~i~g~~~Al~Q~dlKrl 306 (525)
T PRK02546 227 LPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 306 (525)
T ss_pred cCcccchhhhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999999999999999999998777776656667888999999999999999999999999
Q ss_pred HHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHh
Q psy5224 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLA 537 (1178)
Q Consensus 458 lAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls 537 (1178)
+|||||+|+|+++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++.++.++.++
T Consensus 307 lAYSSIsh~G~illgl~~~~~~g~~gal~~~l~H~l~k~~LFl~~g~i~~~~gt~~l~~l~GL~~~~P~~~~~~~i~~ls 386 (525)
T PRK02546 307 IAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386 (525)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCcEeHHHhcCHHhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcccchHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 538 NCSLPGTSGFIGEFMIILSAVKFNF-------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 538 ~~GlPp~~gF~~k~~i~~~~~~~~~-------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++|+||++||++|++++.++.+.+. +..+++.++++++++|++|.++++++|+.
T Consensus 387 ~~GiPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~ls~~Y~lr~~~~~f~g~~ 447 (525)
T PRK02546 387 SLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPE 447 (525)
T ss_pred HHhchhhchHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999888753 34567789999999999999999999875
|
|
| >PRK12561 NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-60 Score=565.99 Aligned_cols=370 Identities=37% Similarity=0.685 Sum_probs=330.7
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATL 300 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~ 300 (1178)
+..+|.|++++++.+++|++|.++..++.+++.++.+++.+.+++.++|+.+++++..++++++.|+|++++|++||+++
T Consensus 41 ~~~~w~~~~gi~~~l~~D~ls~~~~~l~~~v~~l~~l~~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~El~~ 120 (504)
T PRK12561 41 ERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELEL 120 (504)
T ss_pred EeeccccccCceEEEeecHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44589999999998999999999999999999988888765455566799999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHH--HHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhc
Q psy5224 301 IPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL--YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKI 378 (1178)
Q Consensus 301 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~ 378 (1178)
+++|.|++.|+++++.+|+.||++++.+||.+++++++.+ |..++ ++|+.++.+...+.....+.+.++++|+++|+
T Consensus 121 l~~~~LI~~~~~~~~~~aa~ky~i~~~~gs~~lL~~~i~l~~~~~~~-t~~~~~l~~~~~~~~~~~~~~~~ll~gf~~K~ 199 (504)
T PRK12561 121 VPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTF-TFDLAELGAKSYPLALELLLYAGFLIAFGVKL 199 (504)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccHHHHHhhccchhHHHHHHHHHHHHHHHhc
Confidence 9999999999988889999999999999999999986543 33333 78887765432222233455567789999999
Q ss_pred CCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Q psy5224 379 PIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458 (1178)
Q Consensus 379 ~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krll 458 (1178)
|++|||.|+||+|+++|+|++++++|++.|+|.|+++|+..+.+|+....+..++.++|++|+++|++.|++|+|+||++
T Consensus 200 ~~fPfH~WLPda~~~aPt~vSalLsgvl~K~g~y~l~R~~~~~~~~~~~~~~~~l~~lg~~s~l~gal~al~Q~dlKrlL 279 (504)
T PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRL 279 (504)
T ss_pred CCCCceehhcchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999999877767665445667889999999999999999999999999
Q ss_pred HHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhh
Q psy5224 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLAN 538 (1178)
Q Consensus 459 AySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~ 538 (1178)
|||||+|+|+++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.|++|.++.++.++.+++
T Consensus 280 AYSSIshmG~il~gi~~~~~~g~~ga~~~~l~H~l~k~~lF~~~g~i~~~~~t~~i~~l~Gl~~~~P~~~~~~~i~~ls~ 359 (504)
T PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMAS 359 (504)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHhCChHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccchHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 539 CSLPGTSGFIGEFMIILSAVKFNF-------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 539 ~GlPp~~gF~~k~~i~~~~~~~~~-------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|+||++||++|++++.++.+.+. +..+++.++++++++|++|+++++++|+.
T Consensus 360 ~G~Pp~~GF~sk~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~ls~~Y~lr~~~~~f~g~~ 419 (504)
T PRK12561 360 LALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGLILTPIYLLSMLRRVFYGPR 419 (504)
T ss_pred hcCCccccHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999988752 34566788999999999999999999875
|
|
| >PRK06473 NAD(P)H-quinone oxidoreductase subunit D4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-59 Score=562.26 Aligned_cols=370 Identities=38% Similarity=0.677 Sum_probs=328.6
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhh-hhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
+..+|.+++|+++.+++|++|..+..+++++.+.. +++ .+.+++.+.|+.+++++..++++++.|+|++++|++||++
T Consensus 61 ~~~~w~~~~gi~~~l~iD~ls~~~~~l~~~~~~~~-~~~~~~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~~v~~E~~ 139 (500)
T PRK06473 61 EFIPWIDSLGLSYHLGVDGLSLPLLVLNSLLTLIA-IYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELE 139 (500)
T ss_pred EeeccccccCceEEEEechHHHHHHHHHHHHHHHh-heeecccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44689999999998999999999999998887644 455 3334455678999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh-hHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhc
Q psy5224 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILSWHQLSITKIEQIWLFITFFIAFAIKI 378 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~ 378 (1178)
++++|.|++.|+++++.+|++||++++.+||.++++|+..+|..+|. +++..++.....+...+.+.+.++++||++|+
T Consensus 140 ~l~~~~Li~~~~~~~~~~Aa~ky~i~~~~gs~~lL~gi~~l~~~~g~~~~~~~~l~~~~~~~~~~~~~~~l~l~gf~~K~ 219 (500)
T PRK06473 140 LIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKI 219 (500)
T ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccHHHHHhccCCchhHHHHHHHHHHHHHHhc
Confidence 99999999999988888999999999999999999999888776662 34444433222222233445567789999999
Q ss_pred CCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Q psy5224 379 PIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458 (1178)
Q Consensus 379 ~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krll 458 (1178)
|++|||.|+||+|+|+|+|++++++++++|+|.|+++|+..+.+++....+.+++.++|++|+++|++.|++|+|+||++
T Consensus 220 ~~fPfH~WlP~a~~~ap~~~salLsgv~~k~g~y~l~R~~~~~~~~~~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrll 299 (500)
T PRK06473 220 PLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMV 299 (500)
T ss_pred CccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999987777765445567888999999999999999999999999
Q ss_pred HHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchh---hhhHHHHHHHHHHH
Q psy5224 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII---NVIPHFSVFFIIFS 535 (1178)
Q Consensus 459 AySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~---~~~p~~~~~~~i~~ 535 (1178)
|||||+|+|+++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+. |++|.++.++.++.
T Consensus 300 AYSSIsh~G~il~gl~~~~~~~~~gal~~~~~H~l~k~~LFl~~g~i~~~~gt~~i~~l~Gl~~~~~~~P~~~~~~~i~~ 379 (500)
T PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGV 379 (500)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHhCCcccccccchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999996 67999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|++|+||+.||++|++++.++.+.+++...+++++++++++|++|.++++++|+.
T Consensus 380 lsl~GiPp~~GF~sk~~i~~~~~~~~~~~~~~~~~~s~ls~~y~l~~~~~~f~g~~ 435 (500)
T PRK06473 380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRL 435 (500)
T ss_pred HHHhcCcccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999877777778899999999999999999999864
|
|
| >CHL00011 ndhD NADH dehydrogenase subunit 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-59 Score=559.34 Aligned_cols=370 Identities=35% Similarity=0.676 Sum_probs=331.7
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATL 300 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~ 300 (1178)
+..+|.+++|+++.+++|++|..+.+++++++.++.+++.+.+++.++||.++++...++++++.|+|++++|++||+++
T Consensus 66 ~~~~w~~~~~i~~~l~~D~~s~~~~~l~~~v~~~~~l~~~~~~~~~~~f~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~ 145 (498)
T CHL00011 66 EDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELEL 145 (498)
T ss_pred EeeccccccCceEEEeechhhHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34579999999998999999999999999999999988854445556789999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHH--HHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhc
Q psy5224 301 IPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL--YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKI 378 (1178)
Q Consensus 301 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~ 378 (1178)
+++|.++..|+++++.||++||++++.+||.++++|+..+ |..+++++|+.++.+...+...+.+...++++|+++|+
T Consensus 146 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~~~~y~~~~gs~~~~~l~~~~~~~~~~~~~~~~~l~gf~~K~ 225 (498)
T CHL00011 146 IPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKL 225 (498)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHhhccchhHHHHHHHHHHHHHHHhc
Confidence 9999999999988899999999999999999999998853 43342388887775432222223345556789999999
Q ss_pred CCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Q psy5224 379 PIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458 (1178)
Q Consensus 379 ~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krll 458 (1178)
|++|||.|+||+|+++|++++++++|+++|+|.|+++|+..+.+|+....+.+++..+|++|+++|++.|++|+|+||++
T Consensus 226 ~~fPfH~WLP~a~~~ap~~~s~llsgv~~K~g~y~l~R~~~~~~~~~~~~~~~~l~~l~~is~~~g~~~al~Q~d~Krll 305 (498)
T CHL00011 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRI 305 (498)
T ss_pred CeeccccccchhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 99999999999999999999999999999999999999877777765555677888999999999999999999999999
Q ss_pred HHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhh
Q psy5224 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLAN 538 (1178)
Q Consensus 459 AySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~ 538 (1178)
|||||+|+|+++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++.++.++.+++
T Consensus 306 AYSSIshmG~il~~~~~~~~~~~~g~l~~~~~h~l~k~~lFl~~g~~~~~~gt~~i~~l~Gl~~~~P~~~~~~~i~~ls~ 385 (498)
T CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMAS 385 (498)
T ss_pred HHHhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHCCeeHHHhCChHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccchHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy5224 539 CSLPGTSGFIGEFMIILSAVKFNFC-------IGVLTSTALIFSAAYSLCLSKNIIFVL 590 (1178)
Q Consensus 539 ~GlPp~~gF~~k~~i~~~~~~~~~~-------~~~~~~~~~~ls~~y~l~~~~~~~~g~ 590 (1178)
+|+||+.||++|++++.++.+.+.+ ..++..++++++++|++|.++++++|+
T Consensus 386 ~GiPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~Y~l~~~~~~f~g~ 444 (498)
T CHL00011 386 LALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGY 444 (498)
T ss_pred HhcChhchHHHHHHHHHHHHHhCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999987633 345678899999999999999999986
|
|
| >PRK07363 NAD(P)H-quinone oxidoreductase subunit M; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-58 Score=552.38 Aligned_cols=371 Identities=34% Similarity=0.607 Sum_probs=326.1
Q ss_pred CccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhh-hhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 220 DKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 220 ~~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
.+..+|.+++|+++.+++|++|..+..++.+++. +.+++ ++.+++.++||.+++++..++++++.|+|++++|++||+
T Consensus 60 ~~~~~w~~~~gi~~~l~~D~ls~~~~~l~~~v~~-~~~~s~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~El 138 (501)
T PRK07363 60 QEYLPWNEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYEL 138 (501)
T ss_pred EEeeccccccCceEEEecchhHHHHHHHHHHHHH-HHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999999989999999999999888875 45666 333445567999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh-hHhhHHhhhhhhhhhHHHHHHHHHHHHHHhh
Q psy5224 299 TLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILSWHQLSITKIEQIWLFITFFIAFAIK 377 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K 377 (1178)
+++++|.|+..|+++++.+|++||++++.+||.++++++..++..+|. ++++.++.....+...+.+.+.++++|+++|
T Consensus 139 ~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~l~gf~~K 218 (501)
T PRK07363 139 ELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIK 218 (501)
T ss_pred HHHHHHHheeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccHHHHHhccCChhHHHHHHHHHHHHHHHH
Confidence 999999999999988888999999999999999999988766665552 3443444322222223444567788999999
Q ss_pred cCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q psy5224 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457 (1178)
Q Consensus 378 ~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krl 457 (1178)
+|++|||.|+||+|+++|++++++++++++|+|.|+++|+..+.++.......+++.++|++|+++|++.|++|+|+||+
T Consensus 219 ~~lfPfH~WLPda~~~ap~~~s~lls~v~~k~G~y~l~R~~~~~~~~~~~~~~~~l~~lg~~s~l~g~~~al~Q~dlKrl 298 (501)
T PRK07363 219 IPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRM 298 (501)
T ss_pred cCCCCccchhhhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999987666664433446778889999999999999999999999
Q ss_pred HHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchh---hhhHHHHHHHHHH
Q psy5224 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII---NVIPHFSVFFIIF 534 (1178)
Q Consensus 458 lAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~---~~~p~~~~~~~i~ 534 (1178)
+|||||+|+|+++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+. |++|.++.++.++
T Consensus 299 lAYSSIshmG~il~gl~~~~~~~~~gal~~~~~H~l~k~~LFl~~g~i~~~~g~~~l~~l~Gl~~~~~~~P~~~~~~~i~ 378 (501)
T PRK07363 299 VAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLA 378 (501)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHhCCcchhhhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999997 6799999999999
Q ss_pred HHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 535 SLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 535 ~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++++|+||+.||++|++++.++.+.+++...+..+++++++.|++|.++++++|+.
T Consensus 379 ~lsl~GiPp~~GF~sk~~il~~~~~~~~~~~~~~~i~s~lt~~Y~l~~~~~~f~g~~ 435 (501)
T PRK07363 379 GMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435 (501)
T ss_pred HHHHhcCCccccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999877666777888999999999999999999864
|
|
| >MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-57 Score=538.11 Aligned_cols=362 Identities=34% Similarity=0.566 Sum_probs=325.7
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~ 303 (1178)
.++++.+++|++|..+..++.++++.+.+++.++ + ++.+.|+.+++++..++++++.|+|++++|++||++++++
T Consensus 49 ~~~~~~l~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~i~~ 128 (450)
T MTH00206 49 SFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPT 128 (450)
T ss_pred hhhhHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3567778999999999999999999999888432 2 3445788899999999999999999999999999999999
Q ss_pred HHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCc
Q psy5224 304 FIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWP 382 (1178)
Q Consensus 304 ~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~P 382 (1178)
|.++..|++ ++|.+|+.||++++.+|+.+++.++.++|..+| ++|+.++.+...++..+.+...++++|+++|+|++|
T Consensus 129 ~~Li~~~~~~~~~~~A~~~~li~~~~~s~~ll~~i~~ly~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~gf~~K~~~~P 207 (450)
T MTH00206 129 LLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLG-SLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYG 207 (450)
T ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChhHHHHHhcccchhhHHHHHHHHHHHHHHHcccch
Confidence 999999885 567899999999999999999999988888777 888877754322233345566778899999999999
Q ss_pred ccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhc
Q psy5224 383 MHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462 (1178)
Q Consensus 383 fH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySs 462 (1178)
||.|+||+|+|||+++++++||++.|+|.|+++|+.....+.. ..+...+.++|++|+++|++.|++|+|+||++||||
T Consensus 208 fH~WLP~a~~~ap~~~s~llagvl~K~g~ygl~R~~~~~~~~~-~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrllAYSS 286 (450)
T MTH00206 208 VHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPST-KLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSS 286 (450)
T ss_pred hheeCchhhhcCCchHHHHHHHHHHHhhHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhh
Confidence 9999999999999999999999999999999999876555443 234567778999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCC
Q psy5224 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLP 542 (1178)
Q Consensus 463 i~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlP 542 (1178)
|+|||++++++..++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|+|
T Consensus 287 IshmG~i~~gl~~~~~~g~~ga~~~~i~H~l~k~~lF~~~g~i~~~~~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~P 366 (450)
T MTH00206 287 VSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLP 366 (450)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhHHHhCChHHhhHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 543 GTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 543 p~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
|+.||++|++++.++.+.+.+...++.++++++++|++|+++++++|+..
T Consensus 367 p~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 416 (450)
T MTH00206 367 PFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTP 416 (450)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999887777788889999999999999999999754
|
|
| >MTH00150 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-57 Score=531.04 Aligned_cols=359 Identities=33% Similarity=0.536 Sum_probs=320.4
Q ss_pred chhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy5224 231 IYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIII 307 (1178)
Q Consensus 231 i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li 307 (1178)
.+..+++|++|..+..++.+++.++.+++.+. +++.++|+.++++...++.+++.|+|++++|++||++++++|.++
T Consensus 16 ~~~~~~~D~ls~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~l~~~~Li 95 (417)
T MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLI 95 (417)
T ss_pred HhhheeecHhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999998888887422 234457888999999999999999999999999999999999999
Q ss_pred HhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 308 GTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 308 ~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
..|+ ++++.||+.||++++..|+.+++.|+.++|..+| ++|+.++.+...+...+.....++++|+++|+|++|||.|
T Consensus 96 ~~~~~~~~~~~A~~~~~~~~~~~s~~ll~gi~~~y~~~g-s~~~~~~~~~~~~~~~~~~~~~lil~g~~~K~~l~PfH~W 174 (417)
T MTH00150 96 LGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYG-SSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174 (417)
T ss_pred HHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHhhcchhHHHHHHHHHHHHHHHhCCccccccc
Confidence 9877 4567899999999999999999999998888777 8888766443222222445667788999999999999999
Q ss_pred ccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHH
Q psy5224 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHM 466 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~ 466 (1178)
+||+|+|+|++++++++|++.|+|.|+++|+.....+ ....+.+++.++|++|+++|++.|++|+|+||++|||||+|+
T Consensus 175 lPda~~~ap~~~s~llsgv~~K~g~y~liR~~~~~~~-~~~~~~~~l~~l~~~s~i~g~l~al~Q~dlKrllAYSSIsh~ 253 (417)
T MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSL-SSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253 (417)
T ss_pred cchhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHH
Confidence 9999999999999999999999999999998643322 233456778899999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcc
Q psy5224 467 GFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSG 546 (1178)
Q Consensus 467 G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~g 546 (1178)
|++++++..+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++.++.++.++++|+||+.|
T Consensus 254 G~il~gi~~~~~~~~~~~l~~~~~h~~~k~~lF~~~g~i~~~~~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~g 333 (417)
T MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333 (417)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCceeHHHhcChHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 547 FIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 547 F~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|++|++++.++.+.+++..+++.+++++++.|++|+++++++|+.
T Consensus 334 F~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~Y~l~~~~~~~~g~~ 378 (417)
T MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGS 378 (417)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999998888888899999999999999999999975
|
|
| >MTH00044 ND4 NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-57 Score=540.14 Aligned_cols=362 Identities=37% Similarity=0.567 Sum_probs=322.7
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~ 303 (1178)
.++++.+++|++|..+.+++.++++++.+++.++ + ++.++|+.++++...++++++.|+|++++|++||++++++
T Consensus 51 ~~~~~~l~~D~ls~~~~~l~~~l~~~~~l~s~~~~~~~~~~~~~~f~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~i~~ 130 (458)
T MTH00044 51 HNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPT 130 (458)
T ss_pred cccceeeeecHhhHHHHHHHHHHHHHHHHHHhHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778899999999999999999999988432 1 3456789999999999999999999999999999999999
Q ss_pred HHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHHHHhhcC
Q psy5224 304 FIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAFAIKIP 379 (1178)
Q Consensus 304 ~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~K~~ 379 (1178)
|.++..|++ +||.||+.||++++.+||.++++|+..+|..+| ++|+.++.... .+...+...+.++++||++|+|
T Consensus 131 ~~Li~~~~~~~~~~~A~~~fli~~~~~s~~lL~gi~~ly~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~gf~~K~~ 209 (458)
T MTH00044 131 LILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSS-SLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMP 209 (458)
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHhcccCChHHHHHHHHHHHHHHHHhcc
Confidence 999998885 577899999999999999999999999888777 88776553211 1222234455677899999999
Q ss_pred CCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q psy5224 380 IWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459 (1178)
Q Consensus 380 ~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllA 459 (1178)
++|||.|+||+|+|+|++++++++|++.|+|.|+++|+.....+.....+.+.+..++++++++|++.|++|+|+||++|
T Consensus 210 ~~PfH~WlPda~~~ap~~~s~lLag~l~K~g~y~liR~~~~~~~~~~~~~~~~l~~l~~~s~l~g~l~al~Q~dlKrllA 289 (458)
T MTH00044 210 IYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIA 289 (458)
T ss_pred hhhhhccCcHHhhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999998644333222345567888999999999999999999999999
Q ss_pred HhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhc
Q psy5224 460 YSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANC 539 (1178)
Q Consensus 460 ySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~ 539 (1178)
||||+|+|++++++..++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++
T Consensus 290 YSSIshmG~il~g~~~~~~~~~~g~~~~~i~H~l~~~~lF~~~g~i~~~~~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~ 369 (458)
T MTH00044 290 YSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANL 369 (458)
T ss_pred HHhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCEeHHHhCChHhHhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 540 SLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 540 GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|+||+.||++|++++.++.+.+.+...++.+++++++.|++|+++++++|+.
T Consensus 370 G~Pp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 421 (458)
T MTH00044 370 GLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSF 421 (458)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999988888888889999999999999999999964
|
|
| >PRK05846 NADH:ubiquinone oxidoreductase subunit M; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-57 Score=548.43 Aligned_cols=370 Identities=55% Similarity=0.990 Sum_probs=335.4
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
+..+|.+++|+++.+++|++|.++.++++++++++.+++.+ .+++.++|+.+++++..++++++.|+|++++|++||++
T Consensus 64 ~~~~w~~~~gi~~~~~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~El~ 143 (497)
T PRK05846 64 EKHPWIPRFGISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAM 143 (497)
T ss_pred eeecccccCCceEEEecchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34579999999888899999999999999999999999843 34555689999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHH----HhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHH
Q psy5224 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYY----ISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (1178)
++++|.++..++++++.||++||++++.+||.++++|+.++|. .+| ++|+.++.+.+.++....+...++++|++
T Consensus 144 ~l~~~~Li~~~~~~~~~~aa~ky~i~~~vgs~~lL~g~~~l~~~~~~~~g-s~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 222 (497)
T PRK05846 144 LIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATG-TFDIADLLNLPLPPGVQYWLFLAFFIAFA 222 (497)
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-cccHHHHHhccCChHHHHHHHHHHHHHHH
Confidence 9999999999988888999999999999999999999998887 566 88887765432223333445567789999
Q ss_pred hhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
+|+|++|||.|+||+|+++|++++++++++++|+|.|+++|+..+.+++....+..++..+|++|+++|++.|++|+|+|
T Consensus 223 ~K~~~~PfH~Wlp~a~~~ap~~~s~lls~~~~K~g~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~~~g~~~al~q~dlK 302 (497)
T PRK05846 223 VKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIK 302 (497)
T ss_pred HhCCCcCceecchhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999876666654444567888899999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFS 535 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ 535 (1178)
|++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..+.++.
T Consensus 303 rlLAySSIsq~G~i~~~l~~~~~~~~~~~l~~~~~h~l~k~~lF~~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~ 382 (497)
T PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFA 382 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHhCCHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|++|+||+.||++|+.+++++.+.+.+...+..++++++..|++|.++++++++.
T Consensus 383 lsl~GiPP~~GF~~K~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 438 (497)
T PRK05846 383 MASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPV 438 (497)
T ss_pred HHHhCCCCcccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999888777777788999999999999999999864
|
|
| >TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase, chain M | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-57 Score=545.35 Aligned_cols=369 Identities=52% Similarity=0.984 Sum_probs=335.3
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATL 300 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~ 300 (1178)
..+|.+++++++.+++|++|..+..+++++++++.+++.+ .+++.++|+.++++...++++++.|+|++++|++||+++
T Consensus 59 ~~~w~~~~~i~~~~~~D~~s~~~~~l~~~v~~~~~l~s~~~~~~~~~~f~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~ 138 (479)
T TIGR01972 59 SIPWIPALGISYHLGVDGISLPLVLLTALLTLLSILASWESIQKRVKEFYALFLLLEAGVIGVFAALDLLLFYVFWEAML 138 (479)
T ss_pred eeccccccCceEEEeechhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3579999999988899999999999999999999999854 344556899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCC
Q psy5224 301 IPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPI 380 (1178)
Q Consensus 301 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~ 380 (1178)
+++|.++..++++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+...++....+...++++|+++|+|+
T Consensus 139 l~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~g-~~~~~~l~~~~~~~~~~~~~~~l~~~g~~~K~~~ 217 (479)
T TIGR01972 139 IPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-TFDLLELINLPLPFSVQTWLFLAFFIAFAVKVPL 217 (479)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHhccCChhHHHHHHHHHHHHHHHhcCc
Confidence 999999999988888999999999999999999999999998887 8888776543322223445566788999999999
Q ss_pred CcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q psy5224 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460 (1178)
Q Consensus 381 ~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAy 460 (1178)
+|||.|+||+|+++|+|+++++++++.|+|.|+++|+..+.+++....+..++..+|++|+++|++.|++|+|+||++||
T Consensus 218 ~PfH~Wlp~a~~~ap~~~salls~~~~K~g~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~~~g~~~al~q~d~KrllAy 297 (479)
T TIGR01972 218 FPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALAVIAIIYGALIALAQTDIKRLIAY 297 (479)
T ss_pred ccceecChhhhhhCChhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999987666665444556788889999999999999999999999999
Q ss_pred hchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcC
Q psy5224 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCS 540 (1178)
Q Consensus 461 Ssi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~G 540 (1178)
|||+|+||++++++.+++.+..++++|+++|++.|..+|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|
T Consensus 298 SSIs~~G~i~~~l~~~~~~~~~~~l~~~~~h~~~k~~lF~~~g~i~~~~~~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G 377 (479)
T TIGR01972 298 SSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYDRAHTRDIAKYGGLANKMPVLAAFFMLFAMASLG 377 (479)
T ss_pred hHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeHHHhCCHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 541 LPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 541 lPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+||+.||++|+.+++++.+.+++...+..++++++..|++|.++++++++.
T Consensus 378 iPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~s~ls~~y~l~~~~~~~~~~~ 428 (479)
T TIGR01972 378 LPGTSGFVGEFLILLGAFKVNPVVAFLAALGIVLTAAYMLWLYKRVFFGEL 428 (479)
T ss_pred CCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999877766677778999999999999999999864
|
This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. |
| >PRK12649 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-58 Score=565.21 Aligned_cols=367 Identities=27% Similarity=0.431 Sum_probs=325.6
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.|++++++++++|++|.+|.+++++++.++.+|+.++ +++.++||.+++++.+++++++.|+|++++|++||
T Consensus 62 ~~~~W~p~~gi~~~~~~D~ls~lf~lli~~i~~lv~lys~~y~~~~~~~~~f~~llll~~~~mlglv~s~dl~~lfvfwE 141 (789)
T PRK12649 62 GSISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWE 141 (789)
T ss_pred EEeeecccCCeeEEEeecHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 346899999999999999999999999999999999999533 34556899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh------hhhHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI------TKIEQIWLFITF 370 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~------~~~~~~~~~~~~ 370 (1178)
++++++|.|+++|++ +++.+++.||++++.+|+.++|+|+.++|..+| |+|+.++.+... +.......+.++
T Consensus 142 l~sl~sy~LI~~~~~~~~~~~aa~kyli~t~~Gs~~lL~gi~~ly~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~~~~li 220 (789)
T PRK12649 142 LTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG-TYDIATILQDSELIENIKGHPLFLITLILI 220 (789)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHhhhhhhcccccccHHHHHHHHH
Confidence 999999999999875 467899999999999999999999999998888 899887754311 112234556788
Q ss_pred HHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 371 FIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM 449 (1178)
Q Consensus 371 ~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al 449 (1178)
++|+++|+++||||+|+||+| ++|+|+|+++ +++++|+|+|++.|+. +.++. ...+..++.++|++|+++|++.|+
T Consensus 221 l~g~~~K~a~fPfH~WLPdA~-~APtpvSalL~sa~mvK~Gvy~l~R~~-~~~~~-~~~~~~~l~~lg~~T~l~gal~Al 297 (789)
T PRK12649 221 FIGAAAKSAQGPFYIWLPNAM-EAPTPVSAFLHSATMVKAGVYLVARIH-PIFSG-TEAWFILVSGTGMITMVLAGFLAF 297 (789)
T ss_pred HHHHHHHhCcccCceeCcccc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999998 6999999975 7899999999999984 55543 234556777899999999999999
Q ss_pred hccchhHHHHHhchhHHHHHHHHHHhcch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhH
Q psy5224 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTK----ISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525 (1178)
Q Consensus 450 ~q~d~krllAySsi~~~G~i~~~~~~~~~----~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p 525 (1178)
+|+|+||++|||||+|+|+++++++.++. .+..++++|+++|++.|+.+|+++|.+++++|+||+++++|+.|++|
T Consensus 298 ~Q~DlKrlLAYSSIsq~G~i~~~lgl~~~~~~~~g~~aal~~li~Hal~Ka~LFl~aG~i~~~~gtrdi~~lgGL~~~mP 377 (789)
T PRK12649 298 RQTDIKAILAYSTISQLAYLMTMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMP 377 (789)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHhcCChhhccH
Confidence 99999999999999999999998777653 58899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh--------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF--------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 526 ~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~--------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.++.++.+|++|+||++||++|+++++++.+.+. ....++++++++++.|++|.++++++|+.
T Consensus 378 ~~a~~~~i~~lslaGlPp~~GF~sK~~i~~a~~~~~~~~~~~~~~~l~~~~~l~svlt~~Y~lr~~~~~f~g~~ 451 (789)
T PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGER 451 (789)
T ss_pred HHHHHHHHHHHHHhhChhhchHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999998642 24456788999999999999999999864
|
|
| >MTH00014 ND4 NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-57 Score=534.38 Aligned_cols=358 Identities=36% Similarity=0.578 Sum_probs=321.4
Q ss_pred hhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 232 YYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIG 308 (1178)
Q Consensus 232 ~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~ 308 (1178)
+..+++|++|..+..++..+..+..+++.++ ++++++|+.++++...++++++.|+|++++|++||++++|+|.++.
T Consensus 52 ~~~l~~D~lS~~l~~L~~~i~~l~~l~s~~~~~~~~~~~~f~~lllll~~~l~~~f~s~dl~~fyv~~E~~li~~~~LI~ 131 (452)
T MTH00014 52 TESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLIL 131 (452)
T ss_pred hHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999998432 3345689999999999999999999999999999999999999999
Q ss_pred hcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccc
Q psy5224 309 TWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387 (1178)
Q Consensus 309 ~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wl 387 (1178)
.||+ +||.||++||++++.+||.++++|+.++|..+| ++|+.++.........+...+.++++|+++|+|++|||.|+
T Consensus 132 ~~g~~~~~~~A~~y~li~t~~gS~~lL~gi~~ly~~~g-sl~~~~l~~~~~~~~~~~~~~~l~llgf~vK~~l~PfH~WL 210 (452)
T MTH00014 132 GWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNN-SLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWL 210 (452)
T ss_pred HhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHhhhcccchHHHHHHHHHHHHHHHhcccccchhcC
Confidence 8874 578899999999999999999999999888777 88886663211111223445667788999999999999999
Q ss_pred cCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHH
Q psy5224 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467 (1178)
Q Consensus 388 p~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G 467 (1178)
||+|+|+|++++++++|++.|+|.|+++|+.. .++.....+.+++..+|++|+++|++.|++|+|+||++|||||+|+|
T Consensus 211 P~a~~~ap~~~s~llagi~~K~g~y~liR~~~-~~~~~~~~~~~~l~~l~~~s~i~g~l~al~Q~dlKrllAYSSIshmG 289 (452)
T MTH00014 211 PKAHVEAPVAGSMILAGILLKLGGYGLLRMSS-LFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMG 289 (452)
T ss_pred chhhccCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999863 34443344556788899999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCccc
Q psy5224 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547 (1178)
Q Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF 547 (1178)
|++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|+||+.||
T Consensus 290 ~il~gi~~~~~~~~~ga~~~~i~h~l~~~~lF~~~g~~~~~~~t~~i~~~~Gl~~~~P~~~~~~~i~~ls~~GiPp~~gF 369 (452)
T MTH00014 290 LMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINL 369 (452)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHcCCchhhhHHHHHHHHHHHHHHhhCcccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 548 ~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++|++++.++.+.+++.++++.++++++++|++|++++.++|+.
T Consensus 370 ~~e~~i~~~~~~~~~~~~~~~~~~s~ls~~y~l~~~~~~~~g~~ 413 (452)
T MTH00014 370 LSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSP 413 (452)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999988888888899999999999999999999975
|
|
| >PRK07691 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=544.88 Aligned_cols=368 Identities=23% Similarity=0.426 Sum_probs=328.1
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h--hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K--KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.+++++++ .+|++|.++.++++++++++.+|+.++ + ++.++||.+++++..++++++.|+|++++|++||
T Consensus 61 ~~~~w~~~~gi~~--~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~~~f~~l~l~~~~~~~~~~~s~dl~~~~v~~E 138 (496)
T PRK07691 61 ELGNWKAPFGIVF--VADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFE 138 (496)
T ss_pred EecCCCCCceeEE--ehhHhHHHHHHHHHHHHHHHHHHhhHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888888765 599999999999999999999999533 2 2233689999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--h---hhhHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--I---TKIEQIWLFITFFI 372 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~---~~~~~~~~~~~~~~ 372 (1178)
++++++|.|+..++++++.++++||++++.+||.++++|+.++|..+| ++|+.++.+.. . ++........++++
T Consensus 139 ~~~l~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 217 (496)
T PRK07691 139 VMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVG-TLNMADISVKIAELSAGQTGLITVVAILFLF 217 (496)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHHHHhhcccccchHHHHHHHHHHH
Confidence 999999999999988888899999999999999999999999998777 88887765321 1 11223345566788
Q ss_pred HHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 373 g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
|+++|+|++|||.|+||+|+++|+|++++++++++|+|.|+++|+....++.....+.+++.++|++|+++|++.|++|+
T Consensus 218 g~~~K~g~fPfH~Wlp~a~~~ap~~vsalls~~~~K~g~~~l~r~~~~~~~~~~~~~~~~l~~l~~ls~i~g~~~al~q~ 297 (496)
T PRK07691 218 VFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297 (496)
T ss_pred HHHHHHHhccccccCccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999887766654444567788899999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..+.
T Consensus 298 d~KrlLAYSSIsq~G~i~l~l~~~~~~~~~g~l~~~~~h~~~k~~LFl~~g~i~~~~~~~~i~~l~Gl~~~~P~~~~~~~ 377 (496)
T PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFF 377 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHccChhhhchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||++||++||++++++.+.+. +...+..++++++++|++|..++.++|+.
T Consensus 378 i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~i~~l~s~l~~~y~lr~~~~~f~g~~ 437 (496)
T PRK07691 378 IAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEP 437 (496)
T ss_pred HHHHHHhCCCccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999998764 45566778899999999999999999864
|
|
| >TIGR00944 2a6301s04 Multicomponent K+:H+antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-57 Score=539.92 Aligned_cols=368 Identities=22% Similarity=0.345 Sum_probs=327.4
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.+++++. +++|++|..+.++++++++++.+++.++ +++.++|+.+++++..++++++.|+|++++|++||
T Consensus 58 ~~~~w~~~~gi~--l~~D~ls~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~f~~l~ll~~~g~~~~~~s~dl~~~~v~~E 135 (463)
T TIGR00944 58 QLGNWKAPYGIV--LVLDRFSALLLCTTSIIALAVQLYSMARWGTARERHHYYSLVQFLLAGLNGAFLTGDLFNLFVFFE 135 (463)
T ss_pred EecCCCCCcceE--EeechHHHHHHHHHHHHHHHHHHHhhHHHhccCccccHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345798888864 6799999999999999999999998422 22345799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh-----hhhhHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS-----ITKIEQIWLFITFFI 372 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~~~~~~ 372 (1178)
++++++|.++..++++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+.. .+.........++++
T Consensus 136 ~~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~g-~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 214 (463)
T TIGR00944 136 MMLAASYGLLVHGSTKIQLKEGLKYIAVNLVSSALFVIGVSLLYGVAG-TLNMADLSTKLAALEPRSRGLVEMGSALLGV 214 (463)
T ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cCcHHHHHHHHhhcccccchHHHHHHHHHHH
Confidence 999999999999888888999999999999999999999999988887 88887764321 112223455677889
Q ss_pred HHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 373 g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
|+++|+|++|||.|+||+|+++|+|++++++++++|+|.|+++|+....++.......+++.++|++|+++|++.|++|+
T Consensus 215 g~~~K~~~~PfH~WlP~a~~~ap~~~s~lls~~~~K~g~y~lir~~~~~~~~~~~~~~~~l~~lg~~s~~~g~~~al~Q~ 294 (463)
T TIGR00944 215 VFLVKAGMFPLSFWLPTAYYAPPPPIAAVFGALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTLAMLTIIFGGIGVLAYQ 294 (463)
T ss_pred HHHHHHhhhhhhhhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999876665543334456778899999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+||++++++.+++.+..++++|+++|++.|.++|+++|.+++++|+|++++++|+.+++|.++..+.
T Consensus 295 dlKrllAYSSIs~~G~il~~l~~~~~~~~~~~~~~~i~h~~~k~~lF~~~g~i~~~~~~~~i~~l~gl~~~~p~~~~~~~ 374 (463)
T TIGR00944 295 NMGKIAGYNVLVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKGALFLLIGLVIRGTGTATLEAYGGLIKRYPVLGWCFF 374 (463)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHccCchhhhHHHHHHHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNFC-IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||++||++|+.++.++.+.+.+ ...+..++++++.+|++|.++++++|+.
T Consensus 375 i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~l~~s~~~~~~~lr~~~~~~~g~~ 434 (463)
T TIGR00944 375 ICALSLAGIPPLSGFIGKFAIISGLFDMGDWTYVTLLLLSSLAVLYSVNRIFIRTFWGSI 434 (463)
T ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999988754 4455677788888889999999999865
|
|
| >MTH00124 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-57 Score=534.58 Aligned_cols=361 Identities=34% Similarity=0.586 Sum_probs=320.4
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~ 303 (1178)
+++++.+++|++|..+..++.++..++.++++++ + ++.++|+.+++++..++.+++.++|++++|++||++++++
T Consensus 50 ~~~~~~~~~D~~s~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~f~~l~l~~~~~~~~~~~s~dl~~~yv~~E~~~i~~ 129 (457)
T MTH00124 50 KNLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPT 129 (457)
T ss_pred ccchhHHhccHhhHHHHHHHHHHHHHHHHHhhHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999998888432 2 2344688899999999999999999999999999999999
Q ss_pred HHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHHHHhhcC
Q psy5224 304 FIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAFAIKIP 379 (1178)
Q Consensus 304 ~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~K~~ 379 (1178)
|.++..|++ ++|.+|+.||++++..||.++++++..+|..+| ++|+.++.... .++..+.....++++||++|+|
T Consensus 130 ~~Li~~~~~~~~~~~A~~y~~~~t~~gs~~lL~~i~~ly~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~l~gf~~K~~ 208 (457)
T MTH00124 130 LILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTG-TLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMP 208 (457)
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHhhhccCCchHHHHHHHHHHHHHHHhcc
Confidence 999998885 567899999999999999999999998888777 88887765432 1122233445567899999999
Q ss_pred CCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q psy5224 380 IWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459 (1178)
Q Consensus 380 ~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllA 459 (1178)
++|||.|+||+|+|||+|+++++||++.|+|.|+++|+.....+... .+...+..++++|+++|++.|++|+|+||++|
T Consensus 209 ~~PfH~WlP~a~~~aP~~~s~llag~~~K~g~ygliR~~~~~~~~~~-~~~~~l~~l~~~s~l~g~l~al~Q~dlKrllA 287 (457)
T MTH00124 209 LYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSN-TLHYPFLTLALWGALMTSLICLRQTDLKSLIA 287 (457)
T ss_pred cchhhhcCchhhhcCChHHHHHHHHHHHHhhHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 99999999999999999999999999999999999998766554332 23445667999999999999999999999999
Q ss_pred HhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhc
Q psy5224 460 YSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANC 539 (1178)
Q Consensus 460 ySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~ 539 (1178)
||||+|||++++++..++..|..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++
T Consensus 288 YSSIshmG~i~~g~~~~~~~g~~gal~~~i~H~l~~~~lF~~~g~~~~~~~tr~i~~~~Gl~~~~P~~~~~~~i~~l~~~ 367 (457)
T MTH00124 288 YSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNM 367 (457)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHhCChHHHhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 540 SLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 540 GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|+||+.||++|+.++.++.+.+++...+..++++++++|++|++++.++|+.
T Consensus 368 G~Pp~~gF~~k~~i~~~~~~~~~~~~~~~~l~s~ls~~y~l~~~~~~~~g~~ 419 (457)
T MTH00124 368 ALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTL 419 (457)
T ss_pred ccCccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999988776778889999999999999999999963
|
|
| >PRK08676 hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-57 Score=537.52 Aligned_cols=357 Identities=26% Similarity=0.397 Sum_probs=321.1
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----------hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDI-K----------KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLI 301 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----------~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i 301 (1178)
+.+++|++|.++..+++++++++.+++.++ + ++.++||.+++++..++++++.|+|++++|++||++++
T Consensus 57 ~~l~vD~ls~~~~~l~~~v~~~~~l~s~~y~~~~~~~~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~El~~l 136 (485)
T PRK08676 57 RYLFIDHLGIFVVLIASVVFILAALYARGYVDHLLSNGELDPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTV 136 (485)
T ss_pred CeEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 567899999999999999999999998432 1 23457999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHH------hhhhHhhHHhhhh--hhhhhHHHHHHHHHHHH
Q psy5224 302 PIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI------SNKSFNILSWHQL--SITKIEQIWLFITFFIA 373 (1178)
Q Consensus 302 ~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~------~~~s~~~~~~~~~--~~~~~~~~~~~~~~~~g 373 (1178)
++|.++..++++++.+|++||++.+.+++.+.++|+.++|.. +| ++|+.++.+. +.++..+.+.+.++++|
T Consensus 137 ~~~~Li~~~~~~~~~~aa~kY~i~~s~~~~~~l~gi~lly~~~~~~~~~g-t~~~~~l~~~~~~~~~~~~~~~~~l~~~g 215 (485)
T PRK08676 137 FSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQALGTG-TLNWTELAAHASLLSPSVLGASFLFIFIG 215 (485)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-cccHHHHHHhhccCChhHHHHHHHHHHHH
Confidence 999999999988889999999999999999999999888764 34 7888776432 12333445566788899
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhch-hhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP-DASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~-~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
+++|+|++|||.|+||+|+++|+|++++++++++|+|.|+++|+..+..+ +....+.+++.++|++|+++|++.|++|+
T Consensus 216 ~~~K~~l~PfH~WlPda~~~aP~~~Salls~~~~K~g~y~l~R~~~~~~~~~~~~~~~~~l~~l~~ls~~~gal~al~Q~ 295 (485)
T PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295 (485)
T ss_pred HHHHHhhcccceecccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998655543 22345677888999999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..+.
T Consensus 296 dlKrllAYSSIshmG~ill~i~~~~~~~~~~al~~~i~H~~~k~~LFl~~G~i~~~~~t~~i~~l~Gl~~~~P~~~~~~~ 375 (485)
T PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVI 375 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHhcChHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVL 590 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~ 590 (1178)
++.+|++|+||++||++|+.++.++.+.+++...+..++.++++.|++|.++|.+++.
T Consensus 376 i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~l~a~~~l~~~~~~~~~~ 433 (485)
T PRK08676 376 LGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAFTRV 433 (485)
T ss_pred HHHHHHhcCCccchHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999988877777778888999999999999998863
|
|
| >TIGR00940 2a6301s01 Tmonovalent cation:proton antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-57 Score=560.90 Aligned_cols=367 Identities=27% Similarity=0.453 Sum_probs=326.9
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.|++++++++++|++|..|.+++++++.++.+|+.++ +++.++||.+++++.+++++++.|+|++++|++||
T Consensus 57 ~~~~w~p~~gi~~~l~~D~ls~~f~lli~~i~~lv~lys~~y~~~~~~~~~f~~llll~~~~mlglv~s~dl~~l~vf~E 136 (793)
T TIGR00940 57 YTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWE 136 (793)
T ss_pred EEeccccccCeEEEEeecHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345899999999999999999999999999999999999543 34556899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIA 373 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g 373 (1178)
++++++|.|+++|+++ ++.++++||++++.+||.++|+|+.++|..+| ++|+.++.+... ++........++++|
T Consensus 137 l~sl~s~~LI~~~~~~~~~~~aa~ky~i~t~~gs~~lL~gi~~l~~~~G-t~~~~~i~~~~~~~~~~~~~~~~~~lil~g 215 (793)
T TIGR00940 137 LTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITG-SFSIDAVIASADAIRNSPLFGTAMVLVLLG 215 (793)
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHhhhccccchHHHHHHHHHHHH
Confidence 9999999999998855 56899999999999999999999999998887 999887754321 122234556778899
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
+++|+|+||||+|+||+| ++|+|+++++ +++++|+|+|++.|+. +.+.. ...+.+++.++|++|+++|++.|++|+
T Consensus 216 ~~~K~a~fPfH~WLPda~-~APtpvSa~L~sa~~~K~Gvy~l~R~~-~~~~~-~~~~~~~l~~lg~~t~l~ga~~Al~Q~ 292 (793)
T TIGR00940 216 AFTKSAQFPFHIWLPDAM-EAPTPVSAYLHSATMVKAGLYLLARFT-PVFAG-TEAWFWIVGLAGLITLLWGSYFAIFQQ 292 (793)
T ss_pred HHHhcCcCcCcccccccc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999 6999999976 7899999999999985 55533 334567788899999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcch-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccc
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTK-------------ISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGG 519 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~-------------~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~g 519 (1178)
|+||++|||||+|+|+++++++.++. .+..++++|+++|++.|+.+|+++|.+++++|+|++++++|
T Consensus 293 dlKrlLAYSSIsq~G~i~~~lgig~~~~~~~~~~~~iy~~~~~gal~~li~Hal~Ka~LFl~aG~i~~~tgtrdi~~lgG 372 (793)
T TIGR00940 293 DLKGILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGG 372 (793)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHhcC
Confidence 99999999999999999998888776 78899999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-----------HHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy5224 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-----------CIGVLTSTALIFSAAYSLCLSKNIIF 588 (1178)
Q Consensus 520 l~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-----------~~~~~~~~~~~ls~~y~l~~~~~~~~ 588 (1178)
+.|++|.++.++.++.+|++|+||++||++|+++++++.+.+. +..+++++++++++.|++|++++.++
T Consensus 373 L~~~mP~~~~~~~i~~lSlaGlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~l~~i~~l~svlt~~Y~lr~~~~~f~ 452 (793)
T TIGR00940 373 LFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFF 452 (793)
T ss_pred hHhhhHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999988642 34566788999999999999999999
Q ss_pred hhh
Q psy5224 589 VLG 591 (1178)
Q Consensus 589 g~~ 591 (1178)
|+.
T Consensus 453 g~~ 455 (793)
T TIGR00940 453 GRP 455 (793)
T ss_pred CCC
Confidence 864
|
This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. |
| >PRK12665 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=540.38 Aligned_cols=366 Identities=22% Similarity=0.440 Sum_probs=326.9
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh--hh-----hhhHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI--KK-----KLAEYMSAFLILSGLIIGAFCALDGMLFY 293 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~--~~-----~~~~~~~l~l~~~~~~~~~~~s~dl~~~~ 293 (1178)
+..+|.+++|++ +++|++|..+.++++++++++.+|+.++ ++ +.++||.+++++..|+++++.|+|++++|
T Consensus 60 ~~g~w~~~~gi~--~~~D~ls~~~~~l~~~v~~~~~lys~~~~~~~~~~~~~~~~f~~l~lll~~g~~~~~~s~dl~~~~ 137 (521)
T PRK12665 60 QLGGWDAPIGIT--LVVDRLSALMLVVSSVVLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLY 137 (521)
T ss_pred EecCcCccccce--EEechhHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 345799888875 5699999999999999999999998432 11 22468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh--hhhhhHHHHHHHHHH
Q psy5224 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL--SITKIEQIWLFITFF 371 (1178)
Q Consensus 294 ~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~~~~~~~~ 371 (1178)
++||++++++|.++..++++++.++++||++++.+||.++++|+.++|..+| ++|+.++.+. +.+...+.....+++
T Consensus 138 vf~El~~l~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~G-s~~~~~l~~~~~~~~~~~~~~~~~l~~ 216 (521)
T PRK12665 138 VGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATG-TLNMADLAVRLDELPSGTRTALFAVLL 216 (521)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cCCHHHHHHHHhcCChhHHHHHHHHHH
Confidence 9999999999999999888888999999999999999999999999998887 8888776542 223333455667788
Q ss_pred HHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 372 IAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQ 451 (1178)
Q Consensus 372 ~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q 451 (1178)
+|+++|+|+||||.|+||+|+++|+|++++++++++|+|+|+++|+....++.. .+.+++..+|++|+++|++.|++|
T Consensus 217 ~g~~~K~glfPfH~WlP~a~~~ap~~~salls~~~~K~g~y~l~R~~~~~~~~~--~~~~~l~~lg~~s~i~g~~~al~q 294 (521)
T PRK12665 217 VAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG--GLDTLLMVVALLTMVVGILGAIAQ 294 (521)
T ss_pred HHHHHHcCCcchheehhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHhcCch--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999876666542 246778889999999999999999
Q ss_pred cchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHH
Q psy5224 452 IDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFF 531 (1178)
Q Consensus 452 ~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~ 531 (1178)
+|+||++|||||+|+||++++++.++..+..++++|+++|++.|+.+|+++|.+++++|++++++++|+.+++|.++.++
T Consensus 295 ~dlKrlLAYSSI~~~G~illgl~~~~~~~~~gal~~~~~H~~~k~~LFl~~g~i~~~~g~~~i~~l~Gl~~~~P~~~~~f 374 (521)
T PRK12665 295 SDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLF 374 (521)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHhcChhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCcccchHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 532 IIFSLANCSLPGTSGFIGEFMIILSAVKFNFC----IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 532 ~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~----~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.+|++|+||++||++||++++++.+.+.+ ..+.++++++++..|++|.+++.++|+.
T Consensus 375 ~i~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~ll~s~~~l~~~~r~~~~~f~g~~ 438 (521)
T PRK12665 375 FVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLYAVARVWTKAFWRAR 438 (521)
T ss_pred HHHHHHHhccCccchHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999987642 2334578899999999999999999875
|
|
| >PRK12667 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-57 Score=543.65 Aligned_cols=368 Identities=26% Similarity=0.411 Sum_probs=327.5
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h--hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K--KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.+++|+.+ .+|++|..+..+++++++++.+|+.++ + ++.++||.+++++..|+++++.|+|++++|++||
T Consensus 66 ~~~~w~~~~gi~~--~~D~ls~~~~~l~~~~~~~~~l~s~~y~~~~~~~~~f~~l~ll~~~g~~g~~~s~dl~~l~v~~E 143 (520)
T PRK12667 66 LFGGWPAPIGIVY--EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLE 143 (520)
T ss_pred EeCCCCCCcceEE--EecHHHHHHHHHHHHHHHHHHHHhHHHHhcccccCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3457988888765 589999999999999999999999543 2 2234799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh-----------h--hhHH
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI-----------T--KIEQ 363 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~-----------~--~~~~ 363 (1178)
++++++|.|++.++++ ++.||++||++++.+||.++++|+.++|..+| ++|+.++.+... . ....
T Consensus 144 l~~l~~~~Li~~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 222 (520)
T PRK12667 144 VLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFG-TLNMADLSAKIRGLSFPLTGGLAGNPPLAL 222 (520)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHhhhcccccccccccccchHH
Confidence 9999999999987754 67899999999999999999999999998887 888877643210 0 1112
Q ss_pred HHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchh------hHHHHHHHHHHHH
Q psy5224 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD------ASYYFSNLIITLS 437 (1178)
Q Consensus 364 ~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~------~~~~~~~~l~~~~ 437 (1178)
...+.++++|+++|+|++|||.|+||+|+++|+|++++++++++|+|+|+++|+..+.++. ....+.+++.++|
T Consensus 223 ~~~~~l~l~g~~~K~glfPfH~Wlpda~~~apt~vsalls~~~~k~g~y~l~r~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (520)
T PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSPILIILG 302 (520)
T ss_pred HHHHHHHHHHHHHHHhhcchHhhhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccchhHHHHHHHHHHH
Confidence 3455678889999999999999999999999999999999999999999999987666653 2334567888999
Q ss_pred HHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcc
Q psy5224 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNF 517 (1178)
Q Consensus 438 ~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~ 517 (1178)
++|+++|++.|++|+|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+++++++
T Consensus 303 ~~s~l~g~l~al~Q~dlKrlLAYSSIs~~G~il~~l~~~~~~~~~~~l~~~i~h~~~k~~lFl~~G~i~~~~g~~~i~~l 382 (520)
T PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382 (520)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 518 ~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|+.+++|.++..+.++.+|++|+||++||++||.+++++.+.+. +..++++++++++.+|++|..+++++++.
T Consensus 383 ~Gl~~~~P~~~~~~~i~~lsl~GlPP~~GF~~K~~i~~~~~~~~~~~~~~i~~~~s~ls~~yylr~~~~~~~g~~ 457 (520)
T PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKP 457 (520)
T ss_pred CChhhhChHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999998764 45677888999999999999999999864
|
|
| >PRK08375 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-57 Score=541.34 Aligned_cols=367 Identities=25% Similarity=0.454 Sum_probs=330.0
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATL 300 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~ 300 (1178)
..+|.++++++ +++|++|..+..+++++++.+.+|+.+. +++.++||.++++...++++++.|+|++++|++||+++
T Consensus 62 ~~~w~~~~~i~--~~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~E~~~ 139 (487)
T PRK08375 62 VGGWPPGIGIE--LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMS 139 (487)
T ss_pred ecCCCCCcceE--EEechhHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35788877764 5899999999999999999999999532 44556899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCC
Q psy5224 301 IPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPI 380 (1178)
Q Consensus 301 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~ 380 (1178)
+++|.++..++++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+...+.........++++|+++|+|+
T Consensus 140 l~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~~~~~~~~~~l~~~g~~~K~~~ 218 (487)
T PRK08375 140 LSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG-TLNMADLAGALAENPTVVTAFGFVLLALALKAAV 218 (487)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHhhhccccHHHHHHHHHHHHHHHHHHh
Confidence 999999999988888999999999999999999999999988777 8888777543222223345567788999999999
Q ss_pred CcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchh---hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q psy5224 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD---ASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457 (1178)
Q Consensus 381 ~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~---~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krl 457 (1178)
+|||.|+||+|+++|++++++++++++|+|+|+++|+..+.++. ....+.+++.++|++|+++|++.|++|+|+||+
T Consensus 219 ~PfH~Wlp~a~~~ap~~~s~lls~~~~K~g~~~l~r~~~~~~~~~~~~~~~~~~~l~~l~~~s~~~g~~~al~q~dlKrl 298 (487)
T PRK08375 219 FPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRV 298 (487)
T ss_pred ccchhhcccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999987666654 123456788889999999999999999999999
Q ss_pred HHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHh
Q psy5224 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLA 537 (1178)
Q Consensus 458 lAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls 537 (1178)
+|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++.++.++.+|
T Consensus 299 lAySSis~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~~~~~i~~l~Gl~~~~P~~~~~~~i~~ls 378 (487)
T PRK08375 299 LAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378 (487)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHccChhhhchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 538 NCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 538 ~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++|+||+.||++|++++.++.+.+. +...+..+++++++.|++|+++++++++.
T Consensus 379 l~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~~l~s~l~~~y~lr~~~~~f~~~~ 433 (487)
T PRK08375 379 LIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPP 433 (487)
T ss_pred HhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999998764 45567788999999999999999999864
|
|
| >MTH00205 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-56 Score=524.19 Aligned_cols=361 Identities=33% Similarity=0.560 Sum_probs=322.3
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~L 306 (1178)
+++..+++|++|..+..++.+++.++.+++.++ +++.++|+.++++...++++++.|+|++++|++||++++++|.+
T Consensus 48 ~~~~~~~~D~ls~~~~~l~~~~~~~~~l~s~~~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~yv~~El~~i~~~~L 127 (448)
T MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127 (448)
T ss_pred ccceeeeecHhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567899999999999999999999988432 23345789999999999999999999999999999999999999
Q ss_pred HHhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 307 IGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 307 i~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
+..|+ ++||.||++||++++.+||.++++|+..+|..+| ++|+.++.+...+.........++++|+++|+|++|||.
T Consensus 128 i~~~g~~~~~~~Aa~~~li~~~~~s~~lL~gi~~ly~~~g-sl~~~~l~~~~~~~~~~~~~~~l~l~gf~vK~~l~PfH~ 206 (448)
T MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNF-SLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHL 206 (448)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHhccchhHHHHHHHHHHHHHHHHhchhhhhh
Confidence 98877 5678899999999999999999999999888777 888877654221222234455677889999999999999
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhH
Q psy5224 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~ 465 (1178)
|+||+|+|||++++++++|++.|+|.|+++|+.....+ ....+...+..++++|+++|++.|++|+|+||++|||||+|
T Consensus 207 WLP~a~~~AP~~~s~iLagvl~K~g~y~liR~~~~~~~-~~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrllAYSSIsh 285 (448)
T MTH00205 207 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYK-LNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGH 285 (448)
T ss_pred cChhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999998765433 22345667888999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCc
Q psy5224 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545 (1178)
Q Consensus 466 ~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~ 545 (1178)
+|++++++..+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.+..++++|+||+.
T Consensus 286 mG~il~gi~~~~~~g~~gal~~~~~H~~~k~~lF~~~g~i~~~~~tr~i~~l~Gl~~~~P~~~~~~~l~~~~~~g~PP~~ 365 (448)
T MTH00205 286 MGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSL 365 (448)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeHHHcCCCcccchHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 546 GFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 546 gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
||++|++++.++.+.+.+..++..++++++++|++|++++.++|+..
T Consensus 366 gF~se~~i~~~~~~~~~~~~~~~~~~~~l~~~y~l~~~~~~~~G~~~ 412 (448)
T MTH00205 366 NLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVS 412 (448)
T ss_pred cHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999888777788889999999999999999999753
|
|
| >PRK08377 NADH dehydrogenase subunit N; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-56 Score=537.22 Aligned_cols=368 Identities=22% Similarity=0.383 Sum_probs=327.1
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-hhh-hhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKK-LAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
+..+|.+++|+++ .+|.+|..+..+++++++++.+++.++ +++ .++|+.++++...|+++++.|+|++++|++||+
T Consensus 62 ~~~~w~~~~gi~~--~~d~ls~~~~~l~~~v~~~~~~~s~~~~~~~~~~~~~~l~ll~~~g~~g~~~s~dl~~~~v~~El 139 (494)
T PRK08377 62 MAGGWKPPVGINL--YIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEI 139 (494)
T ss_pred EecCCCCCcceEE--EEchHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3457999888765 589999999999999999999999543 222 246888899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh--hhhhhHHHHHHHHHHHHHHh
Q psy5224 299 TLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL--SITKIEQIWLFITFFIAFAI 376 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~ 376 (1178)
+++++|.++..++++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+. ..++....+...++++|+++
T Consensus 140 ~~l~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~l~~~g~~~ 218 (494)
T PRK08377 140 TAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATG-TLNMAHIAQLAGTIDPTVAQVGLALLIFGLAV 218 (494)
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHhcccCchHHHHHHHHHHHHHHH
Confidence 99999999999888888999999999999999999999999988877 8888776532 11222344556778899999
Q ss_pred hcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhh-HHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 377 KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA-SYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 377 K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~-~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
|+|++|||.|+||+|+++|+|++++++++++|+|+|+++|+....++.. ......++.++|++|+++|++.|++|+|+|
T Consensus 219 K~g~~PfH~Wlpda~~~ap~~vsalls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~~l~~l~~ls~l~g~~~al~Q~dlK 298 (494)
T PRK08377 219 EAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVK 298 (494)
T ss_pred HHhhcccceechhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876544321 122346788899999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFS 535 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ 535 (1178)
|++|||||+|+||+++++..+++.+..++++|+++|+++|+.+|+++|.+++++|++++++++|+.|++|.++..+.++.
T Consensus 299 rllAYSSIs~~G~ill~i~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~~~~~~~~~~i~~l~gl~~~~p~~~~~~~i~~ 378 (494)
T PRK08377 299 RMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGA 378 (494)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHhCChhhhChHHHHHHHHHH
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|++|+||+.||++|+.++.++.+.+ ++..++..+++++++.|++|..+++++++.
T Consensus 379 lsl~GlPP~~GF~~K~~i~~~~~~~~~~~l~~i~ll~s~is~~yylr~~~~~~~~~~ 435 (494)
T PRK08377 379 LSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGE 435 (494)
T ss_pred HHHhCCCccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999876 556677788999999999999999998763
|
|
| >PRK12644 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-57 Score=566.43 Aligned_cols=368 Identities=23% Similarity=0.359 Sum_probs=331.5
Q ss_pred CccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q psy5224 220 DKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIF 295 (1178)
Q Consensus 220 ~~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~ 295 (1178)
.+..+|.|++++++.+++|++|.+|.+++++++.++.+|+.++ +++.++||.+++++.+++++++.|+|++++|++
T Consensus 55 ~~~~~W~p~lgi~~~l~vDglS~lf~ll~~~i~~lv~lys~~Y~~~~~~~~~~f~~llllf~~~mlglvlS~dl~~~fVf 134 (965)
T PRK12644 55 TEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVF 134 (965)
T ss_pred EEeeccccccCceEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3456899999999999999999999999999999999999532 234568999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHH
Q psy5224 296 FEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAF 374 (1178)
Q Consensus 296 ~E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 374 (1178)
||++++++|.|+++|+++ ++.++++||++++.+||.++|+|+.++|..+| |+|+.++.+...+.........++++|+
T Consensus 135 wEl~si~sylLI~~~~~~~~~~~Aa~kyli~t~~Gsl~lL~gi~ll~~~~G-t~~l~~l~~~~~~~~~~~~~~~liliG~ 213 (965)
T PRK12644 135 WELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAG-TYRLSELLADPPTGPAVSVAVVLILVGA 213 (965)
T ss_pred HHHHHHHHhhhheecCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHhhcccchHHHHHHHHHHHHH
Confidence 999999999999998865 67899999999999999999999999998888 8998877544323334556677889999
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
++|+|+||||+|+||+| ++|+|+++++ +++++|+|+|++.|+. +.++.. ..+.+++.++|++|+++|++.|++|+|
T Consensus 214 ~~Ksa~fPFH~WLPdA~-~APtpvSa~L~sa~mvKaGvyll~R~~-p~~~~~-~~~~~~l~~lg~iT~l~Gal~Al~Q~D 290 (965)
T PRK12644 214 LSKSAIVPFHFWLPGAM-AAPTPVSAYLHAAAMVKAGIYLVARLA-PGFADV-PVWRPTVLVLGLATMLLGGWRALRQHD 290 (965)
T ss_pred HHHhhhcchHhHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHH-Hhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998 5999999955 8889999999999984 555543 456678899999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
+||++|||||+|+||++++++.++..+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..+.+
T Consensus 291 lKrlLAYSSIsqlG~i~l~lg~gt~~~~~~al~~ll~Hal~ka~LFl~aG~i~~~tgtr~i~~lgGL~~~mP~~a~~~~i 370 (965)
T PRK12644 291 LKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAAL 370 (965)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHcChHhhCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhhh------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFNF------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~~------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++|++++.++++.+. +..+++.+++++++.|++|+.++.++++.
T Consensus 371 a~lSlaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~l~~~~~l~svlt~~Y~lr~~~~~f~g~~ 434 (965)
T PRK12644 371 AAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFARKP 434 (965)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999998653 45567788999999999999999998754
|
|
| >PRK06277 hydrogenase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-56 Score=533.90 Aligned_cols=358 Identities=21% Similarity=0.304 Sum_probs=316.8
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
++++ .+|++|.++..+++++++++.+++.+.+++.++|+.++++...|+++++.|+|++++|++||++++++|.++..
T Consensus 65 gi~~--~~D~ls~~~~~l~~~v~~~~~l~~~~~~~~~~~~~~l~ll~~~~~~g~~~s~dl~~~~vf~E~~~i~~~~Li~~ 142 (478)
T PRK06277 65 GITY--LFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142 (478)
T ss_pred CeEE--EEchHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 56999999999999999999999965555667899999999999999999999999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 310 WGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 310 ~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
++++++.+|++||++++.+||.++|+|+.++|..+| ++|+.++.+... ..........++++|+++|+|++|||.|
T Consensus 143 ~~~~~~~~Aa~ky~l~~~~gs~~~L~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~K~~l~PfH~W 221 (478)
T PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTG-TLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTI 221 (478)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHHHhhccCCchHHHHHHHHHHHHHHHHhCccchhcc
Confidence 988888999999999999999999999999988777 899887764321 1122334566788999999999999999
Q ss_pred ccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhch--hhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP--DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~--~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
+||+|+++|+++++++++. .|++.|+++|.....++ .....+.+++.++|++|+++|++.|++|+|+||++|||||+
T Consensus 222 lpda~~~ap~~~salls~~-~K~~~~~~~~~l~r~~~~~~~~~~~~~~l~~lg~is~i~g~~~Al~Q~dlKrllAYSSIs 300 (478)
T PRK06277 222 KSDIYAKAKPFGSALLQTF-SKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAIS 300 (478)
T ss_pred chhhhCcCCcHHHHHHHHH-HHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985 78899988643222211 01123467888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~ 544 (1178)
|+||++++++.+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++.++.++.+|++|+||+
T Consensus 301 ~~G~i~lgl~~~~~~~~~ga~~~~~~h~l~k~~lFl~~g~l~~~~~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~ 380 (478)
T PRK06277 301 QGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPF 380 (478)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHhCChhhhCHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 545 SGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 545 ~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+||++|+.+++++.+.+ ++...+..++++++.+|++|.+++.++++.
T Consensus 381 ~GF~~K~~i~~~~~~~~~~~~~~~~~l~s~~~~~~~lr~~~~~f~~~~ 428 (478)
T PRK06277 381 NGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKPK 428 (478)
T ss_pred ccHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999887 456667788999999999999999988754
|
|
| >MTH00127 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-56 Score=526.75 Aligned_cols=359 Identities=35% Similarity=0.558 Sum_probs=318.3
Q ss_pred chhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 231 IYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 231 i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
+++.+++|++|..+..++.+++.++.+++.++ + ++.++|+.++++...++++++.++|++++|++||++++|+|.
T Consensus 53 ~~~~~~~D~~s~~~~~l~~~~~~~~~l~s~~~~~~~~~~~~~~f~~l~l~~~~~l~~~f~s~dl~~~yv~~E~~~i~~~~ 132 (459)
T MTH00127 53 LNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLI 132 (459)
T ss_pred hhHHHhcchhhHHHHHHHHHHHHHHHHHhHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999987432 1 234578999999999999999999999999999999999999
Q ss_pred HHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHHHHhhcCCC
Q psy5224 306 IIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAFAIKIPIW 381 (1178)
Q Consensus 306 Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~K~~~~ 381 (1178)
++..|++ ++|.+|+.||++++..|+.+++.++..+|..+| ++|+.++.... .++..+.....++++|+++|+|++
T Consensus 133 Li~~~g~~~~~~~A~~y~~~~~~~gsl~lL~gi~~~y~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~l~gf~~K~~~~ 211 (459)
T MTH00127 133 IITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG-TLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLY 211 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHhhcccccchHHHHHHHHHHHHHHHHhhhc
Confidence 9998886 467799999999999999999999998888777 88887664321 111223344566789999999999
Q ss_pred cccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHh
Q psy5224 382 PMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461 (1178)
Q Consensus 382 PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAyS 461 (1178)
|||.|+||+|+|||++++++++|++.|+|.|+++|+.....+.. ..+...+..++++|+++|++.|++|+|+||++|||
T Consensus 212 PfH~WLP~a~~~AP~~~s~lLagvl~K~g~ygl~R~~~~~~~~~-~~~~~~~~~l~~~s~i~ga~~al~Q~dlKrllAYS 290 (459)
T MTH00127 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLT-KELSYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290 (459)
T ss_pred cccccCchhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999865544432 23445567899999999999999999999999999
Q ss_pred chhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCC
Q psy5224 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSL 541 (1178)
Q Consensus 462 si~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~Gl 541 (1178)
||+|||++++++..+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|+
T Consensus 291 SIshmG~il~gl~~~~~~g~~ga~~~~i~H~l~k~~lF~~~g~~~~~~~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~ 370 (459)
T MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLAL 370 (459)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCceeHHHhCCcHhhhHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 542 PGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 542 Pp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
||+.||++|+.++.++.+.+++..++..+++++++.|++|.++++++|+.
T Consensus 371 Pp~~gF~sk~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 420 (459)
T MTH00127 371 PPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPL 420 (459)
T ss_pred CCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999988777777778999999999999999999974
|
|
| >PRK12663 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-56 Score=536.10 Aligned_cols=366 Identities=25% Similarity=0.420 Sum_probs=325.7
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-hhh--hhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKK--LAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
..+|.+++++++ .+|++|..+..+++++++++.+|+.++ +++ ..+||.++++...++++++.|+|++++|++||+
T Consensus 62 ~~~w~~~~gi~~--~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~~~f~~~~~~~~~g~~~~~~s~dl~~~~v~~El 139 (497)
T PRK12663 62 FGGWLPPFGIQF--TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEV 139 (497)
T ss_pred ecCCCCCcccee--ehhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347888888765 589999999999999999999999543 222 236888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hh-hhHHHHHHHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--IT-KIEQIWLFITFFIAFA 375 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~ 375 (1178)
+++++|.++..++++++.|+++||++++.+||.++++|+.++|..+| ++|+.++.+.. .. .........++++|++
T Consensus 140 ~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~g-~~~~~~l~~~~~~~~~~~~~~~~~~l~~~g~~ 218 (497)
T PRK12663 140 MLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFG-TLNMAHIAMRLNDMGDTATLTTIALLFLLAFG 218 (497)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 99999999999888888999999999999999999999999988877 88887764321 11 1122234455678999
Q ss_pred hhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
+|+|++||| |+||+|+++|++++++++++++|+|.|+++|+....++.......+++.++|++|+++|++.|++|+|+|
T Consensus 219 ~K~g~fPfH-Wlp~a~~~ap~~~salls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~i~g~l~al~q~dlK 297 (497)
T PRK12663 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIR 297 (497)
T ss_pred HHHHhcccc-cCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999 9999999999999999999999999999999876666654445567888999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFS 535 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ 535 (1178)
|++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++.++.++.
T Consensus 298 rllAYSSIs~~G~i~~~~~~~~~~~~~~~~~~~~~h~~~k~~LF~~~g~~~~~~~~~~l~~l~Gl~~~~p~~~~~~~i~~ 377 (497)
T PRK12663 298 RIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILI 377 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHccChhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|++|+||+.||++|+.++.++.+.+ ++..++.++++++++.|++|.+++.++|+.
T Consensus 378 lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~i~ll~s~ls~~y~lr~~~~~f~~~~ 434 (497)
T PRK12663 378 FAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDK 434 (497)
T ss_pred HHHhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999876 456667788999999999999999999864
|
|
| >PRK06521 hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-56 Score=546.35 Aligned_cols=360 Identities=22% Similarity=0.398 Sum_probs=319.5
Q ss_pred chhhhccchhHhHHHHHHHHHHHHHHHhhhhhh-----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 231 IYYFLGIDGLSLWFIPLTAFITLIIILISLDIK-----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 231 i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
+++.+++|++|..|.+++.++++++.+|+.++. ++.++|+.++.++..++++++.|+|+++||++||++++++|.
T Consensus 72 ~~~~l~~D~ls~~f~~l~~~v~~~~~lys~~y~~~~~~~~~~~~~~~~~l~~~gm~~vv~s~dl~~f~v~~El~sl~s~~ 151 (667)
T PRK06521 72 LPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWF 151 (667)
T ss_pred ceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999994331 123467888888899999999999999999999999999999
Q ss_pred HHHhcCCCc-chHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccc
Q psy5224 306 IIGTWGGSN-RSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMH 384 (1178)
Q Consensus 306 Li~~~~~~~-~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH 384 (1178)
|+..+++++ +.+|++||++++.+|+.++++|+.++|..+| ++|+.++.+.+.++......+.++++||++|+|++|||
T Consensus 152 Lv~~~~~~~~~~~Aa~kY~i~~~~gs~~lL~g~~lly~~tG-s~~~~~l~~~~~~~~~~~~~~~l~l~gf~~K~g~~PfH 230 (667)
T PRK06521 152 LVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESG-SYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLH 230 (667)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHhhccCchHHHHHHHHHHHHHHHHhcccchh
Confidence 999877554 4599999999999999999999999998888 88988775543333444556777889999999999999
Q ss_pred ccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 385 TWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 385 ~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
.|+||+|+++|+|+++++|+++.|+|+|+++|+....++....++..++.++|.+|+++|++.|++|+|+||++|||||+
T Consensus 231 ~WLP~a~~~APt~vSallSgv~~K~g~y~llR~~~~~~~~~~~~~~~~l~~lg~~S~i~G~l~Al~Q~dlKrlLAYSSI~ 310 (667)
T PRK06521 231 VWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIE 310 (667)
T ss_pred hhHhHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999876666654455677888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHH
Q psy5224 465 HMGFVTLGIFML-----------TKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 465 ~~G~i~~~~~~~-----------~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
|+|+++++++.+ +..+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.|++|+++.++.+
T Consensus 311 ~~G~illglg~~~~~~~~~~~~l~~l~l~gal~hl~~Hal~K~lLFl~aG~v~~~~gt~~i~~lgGL~~~mP~ta~~f~i 390 (667)
T PRK06521 311 NIGIIFVGLGLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLI 390 (667)
T ss_pred HHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHhCceeHHHhCCHHHhHHHHHHHHHH
Confidence 999999999875 566889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhhh-----------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFNF-----------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-----------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++||++++++++.+. ..++++.+++++++.|+.|.++.+++|++
T Consensus 391 ~~lslaGlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~l~s~la~~y~~k~~~~~f~g~p 459 (667)
T PRK06521 391 GCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLKLAVPIAAAMLALTAALAAMCFVKFYGITFLGRP 459 (667)
T ss_pred HHHHHHhchhhhhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998642 12355678889999999999999998864
|
|
| >MTH00068 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-56 Score=528.21 Aligned_cols=360 Identities=37% Similarity=0.589 Sum_probs=318.6
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIF 304 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~ 304 (1178)
+.+..+++|++|..+..++.+++.++.+++.++ + ++.++|+.++++...++.+++.|+|++++|++||++++++|
T Consensus 51 ~~~~~~~~D~~s~~~~~l~~~i~~~~~l~s~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~v~~E~~~i~~~ 130 (458)
T MTH00068 51 FTNKYFGIDQISSPLLILTCWLLPLMILASQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTL 130 (458)
T ss_pred hhhhHHhccHhhHHHHHHHHHHHHHHHHHhhHHhhccchhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 345667899999999999999999998888432 2 23457888888999999999999999999999999999999
Q ss_pred HHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHHHHhhcCC
Q psy5224 305 IIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAFAIKIPI 380 (1178)
Q Consensus 305 ~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~K~~~ 380 (1178)
.++..|++ ++|.+|+.||++++.+||.++++|+..+|..+| ++|+.++.... .+...+...+.++++|+++|+|+
T Consensus 131 ~Li~~~~~~~~~~~A~~~~li~~~~~s~~lL~gi~~ly~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~l~gf~~K~~~ 209 (458)
T MTH00068 131 IIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLG-SLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPL 209 (458)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHHhhccccchhHHHHHHHHHHHHHHHhcch
Confidence 99998886 467899999999999999999999999988777 88876654321 11112334455678899999999
Q ss_pred CcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q psy5224 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460 (1178)
Q Consensus 381 ~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAy 460 (1178)
+|||.|+||+|+|||+|++++++|++.|+|.|+++|+..+..+. ...+...+.+++++|+++|++.|++|+|+||++||
T Consensus 210 ~PfH~WlPda~~~aP~~~s~~lagvl~K~g~y~l~R~~~~~~~~-~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrllAY 288 (458)
T MTH00068 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPL-SKELSYPFIILALWGVLMTSLICLRQTDLKSLIAY 288 (458)
T ss_pred hhhHhcCcHhhccCChHHHHHHHHHHHHhhHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHH
Confidence 99999999999999999999999999999999999987554432 22345677789999999999999999999999999
Q ss_pred hchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcC
Q psy5224 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCS 540 (1178)
Q Consensus 461 Ssi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~G 540 (1178)
|||+|+|++++++..+++.+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|
T Consensus 289 SSIshmG~~l~~~~~~~~~g~~~a~~~~~~H~l~~~~lF~~~g~~~~~~~tr~l~~l~Gl~~~~P~~~~~~~i~~ls~~G 368 (458)
T MTH00068 289 SSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMA 368 (458)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhCCeeHHHhCChHhhhHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 541 LPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 541 lPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+||+.||++|+.++.++.+.+.+..++..++++++++|++|.+++.++|+.
T Consensus 369 iPp~~gF~sk~~i~~~~~~~~~~~~~~~~l~~~ls~~Y~l~~~~~~~~g~~ 419 (458)
T MTH00068 369 LPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPL 419 (458)
T ss_pred CCccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999988776677889999999999999999999964
|
|
| >MTH00110 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-56 Score=527.09 Aligned_cols=358 Identities=33% Similarity=0.578 Sum_probs=313.2
Q ss_pred hhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5224 232 YYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306 (1178)
Q Consensus 232 ~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~L 306 (1178)
+..+++|++|..+..++.+++..+.+++.++ + ++.+.|+.++++...++.+++.++|++++|++||++++|+|.+
T Consensus 53 ~~~~~~D~~s~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~s~dl~~~~v~~E~~~i~~~~L 132 (459)
T MTH00110 53 SLLFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLII 132 (459)
T ss_pred chheeechhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhh
Confidence 4456799999999999999998888887432 1 1224566677778889999999999999999999999999999
Q ss_pred HHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hhhh-HHHHHHHHHHHHHHhhcCCCc
Q psy5224 307 IGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--ITKI-EQIWLFITFFIAFAIKIPIWP 382 (1178)
Q Consensus 307 i~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~~~-~~~~~~~~~~~g~~~K~~~~P 382 (1178)
+..|++ +||.+|+.||++++.+||.++++|+.++|..+| ++|+.++.... .++. .+...+.++++||++|+|++|
T Consensus 133 i~~~~~~~~~~~A~~~~l~~~~~gs~~lL~gi~~ly~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~l~gf~~K~~~~P 211 (459)
T MTH00110 133 ITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLG-SLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYG 211 (459)
T ss_pred hhhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHhhhhccccchHHHHHHHHHHHHHHHhcchhh
Confidence 998875 567899999999999999999999999888777 88887654221 1111 122344556789999999999
Q ss_pred ccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhc
Q psy5224 383 MHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462 (1178)
Q Consensus 383 fH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySs 462 (1178)
||.|+||+|+|||+|++++++|++.|+|.|+++|+.....|. ...+...+.+++++|+++|++.|++|+|+||++||||
T Consensus 212 fH~WlP~ah~~AP~~~s~~lagvl~K~g~ygl~R~~~~~~~~-~~~~~~~~~~l~~~s~~~g~l~al~Q~DlKrllAYSS 290 (459)
T MTH00110 212 LHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSS 290 (459)
T ss_pred hhhcCcHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 999999999999999999999999999999999986554443 2234455678999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCC
Q psy5224 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLP 542 (1178)
Q Consensus 463 i~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlP 542 (1178)
|+|+|++++++..++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|+|
T Consensus 291 IshmG~il~g~~~~~~~g~~ga~~~~i~H~l~~~~lF~~~g~~~~~~~tr~i~~l~Gl~~~~P~~~~~~~i~~l~~~G~P 370 (459)
T MTH00110 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALP 370 (459)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeHHHhCChHhhhHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 543 GTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 543 p~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|+.||++|+.++.++.+.+.+..+++.+++++++.|++|+++++++|+.
T Consensus 371 p~~gF~sk~~i~~~~~~~~~~~~~~~~~~~~ls~~Y~l~~~~~~~~g~~ 419 (459)
T MTH00110 371 PTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKL 419 (459)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999988776667788999999999999999999963
|
|
| >PRK12662 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-56 Score=534.58 Aligned_cols=366 Identities=25% Similarity=0.439 Sum_probs=325.0
Q ss_pred chhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhh------hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 223 KIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIK------KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 223 ~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
.+|.++++++ +++|++|.++.++++++++++.+|+..+. ++.++||.++++...++++++.|+|++++|++|
T Consensus 62 ~~w~~~~gi~--~~~D~ls~~~~~l~~~~~~~~~l~s~~~~~~~~~~~~~~~f~~l~ll~~~g~~~~~~s~dl~~~~v~~ 139 (492)
T PRK12662 62 GGWGPPYGIE--LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFL 139 (492)
T ss_pred cCCCCCcceE--EEechHHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4798888875 46999999999999999999999984221 123579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh--hh-hhhHHHHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL--SI-TKIEQIWLFITFFIA 373 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~--~~-~~~~~~~~~~~~~~g 373 (1178)
|++++++|.++..++++++.+|++||++++.+||.++++|+.++|..+| ++|+.++.+. +. .+........++++|
T Consensus 140 E~~~i~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~l~~~g 218 (492)
T PRK12662 140 EISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITG-TLNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218 (492)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCHHHHHHHHhhcCCccHHHHHHHHHHHH
Confidence 9999999999999888888999999999999999999999999998777 8888766432 11 111223455677899
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhH----HHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS----YYFSNLIITLSLISIIYISLIAM 449 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~----~~~~~~l~~~~~~s~~~g~~~al 449 (1178)
+++|+|++|||.|+||+|+++|+|++++++++++|+|+|+++|+..+.++... ..+.+++..+|++|+++|++.|+
T Consensus 219 ~~~K~g~~PfH~WlP~a~~~apt~vsalls~~~~K~g~~~l~r~~~~~~~~~~~~~~~~~~~~l~~l~~ls~~~g~l~al 298 (492)
T PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAIVFGSVLAI 298 (492)
T ss_pred HHHHhcccchheecccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHccchhhhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998766555321 13457788999999999999999
Q ss_pred hccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHH
Q psy5224 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSV 529 (1178)
Q Consensus 450 ~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~ 529 (1178)
+|+|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++.
T Consensus 299 ~q~dlKrlLAySSIsq~G~i~~~i~~~~~~~~~~~l~~~~~h~~~k~~lF~~~g~i~~~~~~~~i~~l~gl~~~~P~~~~ 378 (492)
T PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITL 378 (492)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHhcChhhhChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 530 FFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCI-GVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 530 ~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.++.+|++|+||++||++|+.++++..+.+.+. .++..+++++++.|++|.++++++++.
T Consensus 379 ~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~~~~s~ls~~y~lr~~~~~~~~~~ 441 (492)
T PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESR 441 (492)
T ss_pred HHHHHHHHHhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999887544 345678999999999999999999764
|
|
| >KOG4845|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-56 Score=474.08 Aligned_cols=360 Identities=43% Similarity=0.716 Sum_probs=335.0
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIG 308 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~ 308 (1178)
++++.+++|++|..++++++++.+++++.+++ .+++.+.|..+.+....++++.|.+.|++.||+|||...+|.++++.
T Consensus 51 ~~~~~lgiD~lS~~lliLtt~i~~l~i~as~~~~~~~~k~~l~~~lil~~~~I~~F~~~dLlmFYiffE~~lIP~l~lI~ 130 (452)
T KOG4845|consen 51 WISLFLGIDGLSFGLLILTTFIIPLIILASEKGNNNYKKLFLILSLILVFLLIITFSSSDLLMFYIFFELSLIPTLVLIL 130 (452)
T ss_pred heeeEEeechHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45677899999999999999999999999955 55667788889999999999999999999999999999999999999
Q ss_pred hcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccc
Q psy5224 309 TWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387 (1178)
Q Consensus 309 ~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wl 387 (1178)
.||++ ||.+||.|++.|+.+||.++|+|+.......| +.|+........+...+...++...++|++|+|++|+|.|+
T Consensus 131 ~wG~q~erl~aa~yflfYTl~~SlplLi~il~~~~~~g-s~~~~~~~lt~~~~~~~~lm~i~~~~aF~VK~Pi~~lHlWL 209 (452)
T KOG4845|consen 131 GWGSQPERLNAAYYFLFYTLLGSLPLLIGILYINNYGG-SLNFLLLNLTSYPFVISILMYIALLLAFAVKMPIYPLHLWL 209 (452)
T ss_pred HhcCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccc-chhhHHHHhcccHHHHHHHHHHHHHHHHHHhCcchhheeec
Confidence 99965 89999999999999999999999887665555 77776554334555667778888999999999999999999
Q ss_pred cCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHH
Q psy5224 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467 (1178)
Q Consensus 388 p~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G 467 (1178)
||||+|||+.++++++|++.|.|.||++|+.. .+|.......+++++++.+++++++..+.+|+|+|+++|||||+|||
T Consensus 210 PkAHvEAp~sgsMlLAGilLKlG~yG~lR~~~-il~~~t~~~s~~~l~is~igiI~~S~~c~rQ~DLK~lIAYSSVsHM~ 288 (452)
T KOG4845|consen 210 PKAHVEAPTSGSMLLAGILLKLGTYGFLRINM-ILPSATLVHSPVWLVISLIGIIYTSSTCLRQTDLKKLIAYSSVSHMG 288 (452)
T ss_pred chhhccCcchHhHHHHHHHHHcCCccchhHHH-hhhhHhhhcchHHHHHHHHHHHHHhhcCcccccHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999877 77887777789999999999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCccc
Q psy5224 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547 (1178)
Q Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF 547 (1178)
++++|+...+..|..|++..+++|++..+++|.++|..|+|.|+|.++.++|+...+|..+..+.+..+++.++||+.+|
T Consensus 289 ~v~igi~s~T~~g~~GsillMiaHGl~ss~LF~lag~~YdR~~sr~m~~~~Gl~ssmp~m~~~f~~~slANla~Ppt~~f 368 (452)
T KOG4845|consen 289 FVLIGILSITMWGLIGSILLMIAHGLTSSALFCLAGVSYDRSGSRMMYFMGGLFSSMPIMGTWFFLLSLANLALPPTSSF 368 (452)
T ss_pred HHHHHhhcccccchhhHHHHHHHccchHhHHHHHhccchhhccceehhhhccHHHhcHHHHHHHHHHHHHhcCCCchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 548 ~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+|+.++.+.++.+....+++.++.+++++|.++++++.++|+.
T Consensus 369 lgEf~vl~~~~s~s~~~~~l~~i~milta~YsL~l~t~~~~Gkl 412 (452)
T KOG4845|consen 369 LGEFSVLVGIFSWSKIMFVLIAIGMILTAAYSLYLYTSSQMGKL 412 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999888899999999999999999999999974
|
|
| >MTH00163 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=520.36 Aligned_cols=357 Identities=34% Similarity=0.593 Sum_probs=319.5
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~L 306 (1178)
++++.+++|++|..+..++.+++.++.+++.++ +++.++|+.++++...++.+++.|+|++++|++||++++++|.+
T Consensus 47 ~~~~~l~~D~~s~~~~~l~~~i~~l~~l~s~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~v~~El~~i~~~~L 126 (445)
T MTH00163 47 NISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFL 126 (445)
T ss_pred hhhHhheecHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999999999988433 23456788899999999999999999999999999999999999
Q ss_pred HHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 307 IGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 307 i~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
+..|++ +||.+|+.||++++.+||.+++.++..+|..+| ++|+.++.+ ++..+.....++++|+++|+|++|||.
T Consensus 127 i~~~g~~~~~~~A~~y~li~~~~~s~~lL~~i~~l~~~~g-~~~~~~~~~---~~~~~~~~~~l~~~~f~vK~~lfPfH~ 202 (445)
T MTH00163 127 ILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSG-SLSFFLLNF---FGSLNFLWYLSMILAFLVKMPMFFVHL 202 (445)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cchHHHHhh---chhhHHHHHHHHHHHHHHHcccccchh
Confidence 988774 567899999999999999999999998887776 888766543 122233456677899999999999999
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhH
Q psy5224 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~ 465 (1178)
|+||+|+|||++++++++|++.|+|.|+++|+.....+ ....+..++..+|++|+++|++.|++|+|+||++|||||+|
T Consensus 203 WLP~a~~~ap~~~s~iLagvl~Klg~ygl~R~~~~~~~-~~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrllAYSSIsh 281 (445)
T MTH00163 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK-LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAH 281 (445)
T ss_pred cCchhhccCCchhHHHHHHHHHHHHHhHhHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhccHhHHHHHHHHHH
Confidence 99999999999999999999999999999998643322 22234567888999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCc
Q psy5224 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545 (1178)
Q Consensus 466 ~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~ 545 (1178)
+|++++++..++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++..+.++.++++|+||+.
T Consensus 282 mG~i~~~i~~~~~~g~~ga~~~~i~H~l~~~~lF~~~g~i~~~~~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~ 361 (445)
T MTH00163 282 MGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSL 361 (445)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhCCEeHHHhCCCcccChHHHHHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 546 GFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 546 gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
||++|+.++.++.+.+++..+++.+++++++.|++|.+++.++|+.
T Consensus 362 gF~~e~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 407 (445)
T MTH00163 362 NLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKY 407 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999988777778889999999999999999999975
|
|
| >PRK12666 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-55 Score=528.07 Aligned_cols=367 Identities=21% Similarity=0.314 Sum_probs=320.3
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
+..+|.+++++. +++|++|..+.++++++++++.+|+.+ .+++.++||.+++++..++++++.|+|++++|++||++
T Consensus 64 ~~~~w~~~~gi~--l~~D~ls~~~~~l~~~~~~~~~l~s~~~~~~~~~~f~~l~ll~~~g~~g~~~s~dl~~~~v~~El~ 141 (528)
T PRK12666 64 LLGNWPAPFGIV--LVLDRLSALMLLLTALLALAALLYALAGWDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVL 141 (528)
T ss_pred EeCCCCCcccee--eehhHhHHHHHHHHHHHHHHHHHHHhhhhccccccHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456799888875 679999999999999999999999953 33444579999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hhhh---HHHHHHHHHHHHH
Q psy5224 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--ITKI---EQIWLFITFFIAF 374 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~~~---~~~~~~~~~~~g~ 374 (1178)
++++|.++..++++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+.. .+.. .......++++|+
T Consensus 142 ~l~~~~Li~~~~~~~~~~aa~kY~i~~~vgs~~lL~gi~~ly~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~gf 220 (528)
T PRK12666 142 LAASYGLLLHGSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTG-TLNMADLAQRIAQLPAADRALLEAGAALLLVVF 220 (528)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHhhccCccchhHHHHHHHHHHHHH
Confidence 9999999998888888999999999999999999999999998887 88887765421 1111 1123456778999
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhh----HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA----SYYFSNLIITLSLISIIYISLIAMV 450 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~----~~~~~~~l~~~~~~s~~~g~~~al~ 450 (1178)
++|+|+||||.|+||+|+++|+|++++++ +++|+|.|+++|+....+++. ...+.+++.++|++|+++|++.|++
T Consensus 221 ~~K~g~fPfH~WlPda~~~ap~~vsalls-~~~K~g~y~l~r~~~~~~~~~~~~~~~~~~~~l~~lg~ls~i~g~l~al~ 299 (528)
T PRK12666 221 LIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFGAIGVLA 299 (528)
T ss_pred HHHhhhccchhccccccccCChHHHHHHH-HHHHHHHHHHHHHHHHHcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996 789999999999987766542 2334677888999999999999999
Q ss_pred ccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------------hhcc
Q psy5224 451 QIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTR-L------------ISNF 517 (1178)
Q Consensus 451 q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~-~------------l~~~ 517 (1178)
|+|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|++ + ++|+
T Consensus 300 Q~dlKrlLAYSSIsq~G~illg~~~~~~~~~~gal~~~i~h~~~k~~LFl~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (528)
T PRK12666 300 AQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLVERQRGAAADRLAVTPELYDLDEEEE 379 (528)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhcccccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999886 2 4556
Q ss_pred cchhhhhH----HHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy5224 518 GGIINVIP----HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-----CIGVLTSTALIFSAAYSLCLSKNIIF 588 (1178)
Q Consensus 518 ~gl~~~~p----~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-----~~~~~~~~~~~ls~~y~l~~~~~~~~ 588 (1178)
+|+.+++| .++.++.++.+|++|+||++||++|+++++++.+.+. +...+.+++++++++|++|+++++++
T Consensus 380 ~gl~~~mp~~~p~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~y~lr~~~~~f~ 459 (528)
T PRK12666 380 EEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALVLLSGLAALIALTRAGIRLFW 459 (528)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67888554 7788999999999999999999999999999998863 35667788889999999999999999
Q ss_pred hhh
Q psy5224 589 VLG 591 (1178)
Q Consensus 589 g~~ 591 (1178)
++.
T Consensus 460 ~~~ 462 (528)
T PRK12666 460 ASH 462 (528)
T ss_pred CCC
Confidence 853
|
|
| >PRK12645 monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=550.45 Aligned_cols=367 Identities=29% Similarity=0.462 Sum_probs=322.6
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
+..+|.|++|+++.+++|++|.+|.+++++++.++.+|+.++ +++.++||.+++++..++++++.|+|++++|++|
T Consensus 60 ~~~~W~p~lgi~~~~~~D~ls~~f~ll~~~i~~lv~lys~~yl~~~~~~~~~f~~llll~~~~mlg~v~s~dl~~~~vf~ 139 (800)
T PRK12645 60 KTLPWIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFW 139 (800)
T ss_pred EEEeccccCCeEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 345899999999999999999999999999999999998433 2344579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFI 372 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~ 372 (1178)
|++++++|.|+++++++ ++.++++||++++.+||.++++|+.++|..+| ++|+.++.+... ++........++++
T Consensus 140 El~si~s~~LI~~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~ll~~~~G-s~~~~~i~~~~~~~~~~~~~~~~~~lil~ 218 (800)
T PRK12645 140 ELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG-SFSIREMIANADEIQNSPLFIPAMILILL 218 (800)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcHHHHHHHhhccccchHHHHHHHHHHH
Confidence 99999999999998855 46799999999999999999999999988887 888887754311 11223345667889
Q ss_pred HHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQ 451 (1178)
Q Consensus 373 g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q 451 (1178)
|+++|+|+||||+|+||+| ++|+|+++++ +++++|+|+|++.|+. +.++. ...+.+++.++|++|+++|++.|++|
T Consensus 219 g~~~K~a~fPfH~WLP~a~-~aPtpvSa~L~sa~~~K~Gvy~l~R~~-~~~~~-~~~~~~~l~~lg~lT~l~gal~Al~Q 295 (800)
T PRK12645 219 GAFTKSAQFPFYIWLPDAM-EAPTPVSAYLHSATMVKAGIYLVARFT-PIFAG-SQVWFWTVTLVGLITLFWGSLNAVKQ 295 (800)
T ss_pred HHHHHhccccchhhccccc-CCCcHHHHHHHHHHHHHHHHHHHHHHH-HHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 6999999975 7899999999999974 55543 23456778889999999999999999
Q ss_pred cchhHHHHHhchhHHHHHHHHHHhcc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhccc
Q psy5224 452 IDIKKLIAYSSIAHMGFVTLGIFMLT-------------KISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518 (1178)
Q Consensus 452 ~d~krllAySsi~~~G~i~~~~~~~~-------------~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~ 518 (1178)
+|+||++|||||+|+||++++++.++ ..+..++++|+++|++.|+.+|+++|.+++++|+|++++++
T Consensus 296 ~dlKrlLAYSSIsq~G~i~~~lgig~~~~~~~~~~~~~y~~~~~gal~~ll~Hal~Ka~LFl~aG~i~~~tgtr~i~~lg 375 (800)
T PRK12645 296 TDLKGILAFSTVSQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLG 375 (800)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHhC
Confidence 99999999999999999998776653 24788999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-----------HHHHHHHHHHHHHHHHHhhhhhhhh
Q psy5224 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-----------CIGVLTSTALIFSAAYSLCLSKNII 587 (1178)
Q Consensus 519 gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-----------~~~~~~~~~~~ls~~y~l~~~~~~~ 587 (1178)
|+.+++|.++.++.++.+|++|+||++||++|+++++++.+.+. +...+++++++++++|++|.+++++
T Consensus 376 GL~~~mP~~~~~~~i~~lSlaGiPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~svls~~y~lr~~~~~f 455 (800)
T PRK12645 376 GLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNATEANLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTF 455 (800)
T ss_pred ChhhhcHHHHHHHHHHHHHHhhchhhhHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998641 3445678899999999999999999
Q ss_pred hhhh
Q psy5224 588 FVLG 591 (1178)
Q Consensus 588 ~g~~ 591 (1178)
+|+.
T Consensus 456 ~g~~ 459 (800)
T PRK12645 456 FGKY 459 (800)
T ss_pred cCCC
Confidence 9864
|
|
| >PRK12648 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-55 Score=555.14 Aligned_cols=366 Identities=24% Similarity=0.398 Sum_probs=326.9
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
..+|.|++++++.+++|++|..|.+++++++.++.+|+.++ +++.++||.+++++.+++++++.|+|++++|+|||+
T Consensus 59 ~~~W~p~lgi~~~~~~D~lS~~f~lli~~i~~lv~lys~~Y~~~~~~~~~f~~llllf~~~mlglv~s~dl~~lyvfwEl 138 (948)
T PRK12648 59 EIEWLPALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWEL 138 (948)
T ss_pred EeccccccCeeEEEeecHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45799999999999999999999999999999999999533 234568999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIAF 374 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g~ 374 (1178)
+++++|.|+++|+++ ++.+++.||++++.+||..++.|+.++|..+| ++|+.++.+... +.........++++|+
T Consensus 139 ~si~sylLI~~~~~~~~~~~aa~~~li~t~~Gsl~lL~gi~ll~~~~G-t~~l~~l~~~~~~~~~~~~~~~~~~lilig~ 217 (948)
T PRK12648 139 TSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVG-SYDLDVVLAAGDLIRAHPLYPPALVLILLGA 217 (948)
T ss_pred HHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHhhhhccccchHHHHHHHHHHHHH
Confidence 999999999998754 56789999999999999999999999988887 899887754321 1223345667788999
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
++|+|+||||+|+||+| ++|+|+|+++ |++++|+|+|+++|+. +.+.. ...+.+++.++|++|+++|++.|++|+|
T Consensus 218 ~~Ksa~fPfH~WLP~A~-~APtpvSA~L~sa~mvKaGvy~L~R~~-~~~~~-~~~~~~~l~~lg~lT~l~Gal~Al~Q~D 294 (948)
T PRK12648 218 FTKSAQFPFHFWLPHAM-AAPTPVSAYLHSATMVKAGVFLLARLW-PVLAG-TEEWFWIVGGAGLITLLLGAYFALFQHD 294 (948)
T ss_pred HHHHhhccchhhhhhhc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999 7999999966 7899999999999984 44432 2345677889999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++.++.+
T Consensus 295 lKrlLAYSSIsqmG~i~l~ig~g~~~~~~~al~~li~Hal~Ka~LFl~aG~i~~~tgtr~i~~lgGL~~~mP~~~~~~~i 374 (948)
T PRK12648 295 LKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMV 374 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCceeHHHhCChhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhh------hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFN------FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~------~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++|++++.++.+.+ ++..++..++++++..|++|++++.++++.
T Consensus 375 ~~lSlaGlPP~~GF~sK~lil~~~~~~~~~~~~~~~l~~~~~l~s~ls~~y~lr~~~~~f~g~~ 438 (948)
T PRK12648 375 AAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGPP 438 (948)
T ss_pred HHHHHhhchhhchHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998765 344566778999999999999999999864
|
|
| >PRK08376 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-55 Score=531.02 Aligned_cols=361 Identities=24% Similarity=0.410 Sum_probs=320.9
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-hh--hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KK--KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
.++++.+++|++|.++..+++++++++.+++.++ ++ +.++||.+++++..|+++++.|+|++++|++||++++++|.
T Consensus 80 ~~~~~~~~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~~~f~~l~ll~~~g~~~~~~s~dl~~~~v~~El~~l~~~~ 159 (521)
T PRK08376 80 FPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYA 159 (521)
T ss_pred CCeeEEEEEchHHHHHHHHHHHHHHHHHHHhHHHHhcccccCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999999999543 22 24589999999999999999999999999999999999999
Q ss_pred HHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hhhhHHHHHHHHHHHHHHhhcCCCc
Q psy5224 306 IIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAFAIKIPIWP 382 (1178)
Q Consensus 306 Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~K~~~~P 382 (1178)
+++.+++ +++.||++||++++.+||.++++|+.++|..+| ++|+.++.+.. .+...+.....++++|+++|+|++|
T Consensus 160 Li~~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-t~~~~~l~~~~~~~~~~~~~~~~~l~~~g~~~K~g~~P 238 (521)
T PRK08376 160 LVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG-TLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVP 238 (521)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHhccCc
Confidence 9998874 467899999999999999999999999988777 88887765421 1112344556678889999999999
Q ss_pred ccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhh--HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q psy5224 383 MHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA--SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460 (1178)
Q Consensus 383 fH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~--~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAy 460 (1178)
||.|+||+|+++|+|+++++ +++|++|+|+++|+..+.+++. ...+.+++.++|++|+++|++.|++|+|+||++||
T Consensus 239 fH~Wlpda~~~ap~~~sall-~~~k~~g~y~l~r~~~~~~~~~~~~~~~~~~l~~l~~~s~i~g~l~al~Q~dlKrlLAY 317 (521)
T PRK08376 239 VHMWLPDAYPAAPSSISAML-LVIKQAGLYALARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317 (521)
T ss_pred cceecccccccCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 7788889999999877666542 23456778889999999999999999999999999
Q ss_pred hchhHHHHHHHHHHhc------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHH
Q psy5224 461 SSIAHMGFVTLGIFML------------TKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528 (1178)
Q Consensus 461 Ssi~~~G~i~~~~~~~------------~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~ 528 (1178)
|||+|+||++++++.+ ++.+..++++|+++|++.|..+|+++|.+++++|++++++++|+.+++|.++
T Consensus 318 SSIs~~G~il~~l~~~~~~~~~~~~~~~~~~~~~gal~~~~~h~~~k~~lFl~~g~i~~~~~~~~i~~l~Gl~~~~P~~~ 397 (521)
T PRK08376 318 HSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTT 397 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHhcChhhhChHHH
Confidence 9999999999999863 4568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 529 ~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.++.+|++|+||++||++||++++++.+.+++..++..++++++++|++|+.+++++++.
T Consensus 398 ~~~~i~~lsl~GiPp~~GF~~K~~i~~~~~~~~~~l~~i~~l~s~ls~~yylr~~~~~f~~~~ 460 (521)
T PRK08376 398 IAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460 (521)
T ss_pred HHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999998877777778888999999999999999999864
|
|
| >COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-55 Score=499.34 Aligned_cols=357 Identities=22% Similarity=0.349 Sum_probs=325.2
Q ss_pred ccchhHhHHHHHHHHHHHHHHHhhhh----hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5224 236 GIDGLSLWFIPLTAFITLIIILISLD----IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWG 311 (1178)
Q Consensus 236 ~~D~ls~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~ 311 (1178)
..|..+..+.....+.+..+..++.+ .+..+.+||.++++...|++.+..++|+..+|+++|+.++++|.|++..+
T Consensus 65 ~~d~~a~~~~~~~l~~s~~~l~~s~~~~~~~~~~~~Efy~L~l~a~lG~~~~~sa~~l~~lfiglEl~Sl~~Y~L~a~~r 144 (475)
T COG1007 65 IVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALRR 144 (475)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47999999988888888888888832 23345689999999999999999999999999999999999999999998
Q ss_pred CCcch-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHHHHhhcCCCcccccc
Q psy5224 312 GSNRS-YAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIAFAIKIPIWPMHTWL 387 (1178)
Q Consensus 312 ~~~~~-~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~K~~~~PfH~Wl 387 (1178)
+++|. ||++||++.+.++|.+++.|+.++|..+| |+++.++.+... ..........+++.|+++|.+++|||.|.
T Consensus 145 ~~~~s~EaalKYfvlGalsS~~~l~G~al~Y~~tG-sl~l~~i~~~~~~~~~~~~l~~g~vfii~gl~FKlsavPFH~W~ 223 (475)
T COG1007 145 DSKRSSEAALKYFVLGALSSAFLLYGIALVYGATG-SLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWT 223 (475)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHhhhccCccchHHHHHHHHHHHHHHHHHccCcccccC
Confidence 77766 89999999999999999999999999999 999988765422 12223456678999999999999999999
Q ss_pred cCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHH
Q psy5224 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467 (1178)
Q Consensus 388 p~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G 467 (1178)
||+|+++|+|+++++|+..|.++...++|+....++.....|..++.++++.||++|++.|+.|+|+||++|||||+|+|
T Consensus 224 PDVYeGApt~v~afls~a~Kia~f~vl~Ri~~~~~~~~~~~~~~i~~iiAv~SM~~GN~~Al~Q~nvKRlLAYSSIah~G 303 (475)
T COG1007 224 PDVYEGAPTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAYSSIAHMG 303 (475)
T ss_pred cccccCCCccHHHHHHhhHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHhHHHHHH
Confidence 99999999999999999999889999999988877776778889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcc
Q psy5224 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK-TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSG 546 (1178)
Q Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~-~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~g 546 (1178)
|+++++...+..+..+..+|++.|.+++.+.|.++..+.++.+ .+++++++|+.+++|..+..+.+.++|++|+||+.|
T Consensus 304 y~L~gl~a~~~~g~~a~~~y~l~Y~~~~lgaf~~v~~~~~~~~~~~~~~~~~GL~~~~P~~A~~~~i~m~SLaGIPP~~G 383 (475)
T COG1007 304 YLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAESISDLAGLSKRHPLLAALLTILMLSLAGIPPLAG 383 (475)
T ss_pred HHHHHHHHccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchhhhccccccCcHHHHHHHHHHHHHcCCCchhh
Confidence 9999999999999999999999999999999988888877665 688999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5224 547 FIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLGQM 593 (1178)
Q Consensus 547 F~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~l 593 (1178)
|++|++++.++.+.+ +|++++.+++|++++.||+|+.|.+++.++..
T Consensus 384 F~gK~~vf~~av~~~~~~Laii~vl~S~isa~YYlRvv~~m~~~~~~~ 431 (475)
T COG1007 384 FWGKFYVFLAAVQAGLWWLAVIAVLNSAISAYYYLRVVKAMYFEEPEG 431 (475)
T ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999 67999999999999999999999999987643
|
|
| >PRK06458 hydrogenase 4 subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-55 Score=525.05 Aligned_cols=360 Identities=25% Similarity=0.408 Sum_probs=318.9
Q ss_pred chhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h----------hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 231 IYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K----------KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 231 i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~----------~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
++..+++|++|..+.+++.++++++.+++.++ + ++.++|+.+++++..++++++.|+|++++|++||++
T Consensus 61 ~~~~~~~D~ls~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~E~~ 140 (490)
T PRK06458 61 AGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHGELSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEAT 140 (490)
T ss_pred ecCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccchhhhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34457899999999999999999999998432 1 123479999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhh--------HHhhhh--hhhhhHHHHHHHH
Q psy5224 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNI--------LSWHQL--SITKIEQIWLFIT 369 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~--------~~~~~~--~~~~~~~~~~~~~ 369 (1178)
++++|.|+..++++++.||++||++++.+||.++++|+.++|..+| ++|. .++.+. ..++........+
T Consensus 141 ~l~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~~L~gi~~ly~~~g-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 219 (490)
T PRK06458 141 TLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAA-TVMGDGEMAILWTELLKHASLLDPTLMKLAFVF 219 (490)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcccccchhhhHHHHHHhhcccCchHHHHHHHH
Confidence 9999999999988888999999999999999999999999988777 5544 222211 1122233456677
Q ss_pred HHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhh-HHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 370 FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA-SYYFSNLIITLSLISIIYISLIA 448 (1178)
Q Consensus 370 ~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~-~~~~~~~l~~~~~~s~~~g~~~a 448 (1178)
+++|+++|+|++|||.|+||+|+++|+|++++++++++|+|.|+++|+....++.. ...+.+++.++|++|+++|++.|
T Consensus 220 ~~~g~~~K~g~fPfH~Wlpda~~~ap~~vsalls~~~~k~g~~~llr~~~~~~~~~~~~~~~~~l~~l~~ls~i~g~l~a 299 (490)
T PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFL 299 (490)
T ss_pred HHHHHHHHhccCcchhcchhhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999865555432 23456788899999999999999
Q ss_pred HhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHH
Q psy5224 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528 (1178)
Q Consensus 449 l~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~ 528 (1178)
++|+|+||++|||||+|+||+++++..+++.+..++++|+++|++.|+.+|+++|.+++++|++++++++|+.+++|..+
T Consensus 300 l~q~dlKrlLAYSSI~~~G~i~~~~~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~~~~~i~~l~gl~~~~p~~~ 379 (490)
T PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHhCChhhhCcHHH
Confidence 99999999999999999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCI-GVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 529 ~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
..+.++.+|++|+||+.||++||.++.++.+.+.+. +++..+++++++.|++|..+++++++.
T Consensus 380 ~~~~i~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 443 (490)
T PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGEP 443 (490)
T ss_pred HHHHHHHHHHhcCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999987654 677889999999999999999999865
|
|
| >PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-55 Score=548.65 Aligned_cols=366 Identities=25% Similarity=0.361 Sum_probs=323.8
Q ss_pred ccchhccccc-----chhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy5224 221 KKKIWIDYFN-----IYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLF 292 (1178)
Q Consensus 221 ~~~~w~~~~~-----i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~ 292 (1178)
+..+|.|++| +++.+++|++|.+|.+++++++.++.+|+.++ +++.++||.+++++..++++++.|+|++++
T Consensus 56 ~~~~W~p~lg~~~~~i~~~l~~D~LS~~f~lli~~ig~lv~lys~~y~~~~~~~~~f~~llllf~~~mlglvlS~dl~~l 135 (962)
T PRK12650 56 WSVTWIPDLLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVL 135 (962)
T ss_pred EEeecccccCCCcceEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3367999888 88999999999999999999999999999433 334567999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHH
Q psy5224 293 YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFIT 369 (1178)
Q Consensus 293 ~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~ 369 (1178)
|++||++++++|.|+++++ +++.++++||++++.+||.++|+|+.++|..+| |+|+.++.+... +........++
T Consensus 136 fVfwEl~si~SylLI~~~~-~~~~~aA~kyliit~~Gsl~lL~Gi~lly~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~L 213 (962)
T PRK12650 136 FVAWELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG-TTSLSGILHSDVWAEKPGLTTVVAVL 213 (962)
T ss_pred HHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHhhhcccchHHHHHHHHH
Confidence 9999999999999999874 456799999999999999999999999998888 999987754321 11112234456
Q ss_pred HHHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 370 FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448 (1178)
Q Consensus 370 ~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~a 448 (1178)
+++|+.+|+++||||+|+||+|+ +|+|+++++ +++++|+|+|++.|+. +.++. ...+.+++.++|++|+++|++.|
T Consensus 214 il~g~~~Ksa~fPfH~WLPdA~~-aPtpvSA~L~sa~mvKaGiy~L~R~~-~~~~~-~~~~~~~l~~lg~lT~l~Gal~A 290 (962)
T PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMA-AITPVSAFLHAAAVVKAGIYLLLRFS-PVFHD-VAVWNWLLIIVGMITALMGAVFA 290 (962)
T ss_pred HHHHHHHHhcccchhhhHhHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHH-HHhcc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888899999999999999996 899999876 5789999999999975 45544 34567788899999999999999
Q ss_pred HhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHH
Q psy5224 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528 (1178)
Q Consensus 449 l~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~ 528 (1178)
++|+|+||++|||||+|+||++++++.++..+..++++|+++|+++|+.+|+++|.+++++|+|++++++|+.+++|.++
T Consensus 291 l~Q~DlKrlLAYSSIsqlG~i~l~ig~g~~~~~~aal~~li~Hal~Ka~LFl~aG~i~~~~gtrdi~~lgGL~r~mP~t~ 370 (962)
T PRK12650 291 VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTF 370 (962)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHhhChhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh------hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN------FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 529 ~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~------~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.++.+|++|+||++||++|+++++++.+.+ ++...++.++++++.+|++|++++.++++.
T Consensus 371 ~~~~i~~lSmaGiPP~~GF~sK~~il~a~~~~~~~~~~~~ll~~i~~l~S~ls~~y~lr~~~~~f~~~~ 439 (962)
T PRK12650 371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVLGAFVDGP 439 (962)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999998763 234556788999999999999999998643
|
|
| >PRK12646 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-55 Score=543.86 Aligned_cols=366 Identities=25% Similarity=0.464 Sum_probs=320.7
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
..+|.|++|+++.+++|++|.++.+++++++.++.+|+.++ +++.++||.+++++..++++++.|+|++++|++||
T Consensus 61 ~~~W~p~~gi~~~l~~D~ls~~f~lli~~v~~lv~lys~~y~~~~~~~~~~fy~~lllf~~~m~glv~s~dl~~lfvf~E 140 (800)
T PRK12646 61 SIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWE 140 (800)
T ss_pred EEeeccccCccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 46899999999999999999999999999999999999543 12345789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIA 373 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g 373 (1178)
++++++|.|+++|++ +++.++++||++++.+||.++|+|+.++|..+| ++|+.++.+... +.........++++|
T Consensus 141 l~sl~sy~LI~~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~lil~g 219 (800)
T PRK12646 141 LTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG-TNNITEILGQADHIKNHGLFIPMIFMFLLG 219 (800)
T ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHhhhcccchHHHHHHHHHHHH
Confidence 999999999998774 567899999999999999999999999998888 888877643211 111223455678899
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
+++|+|+||||+|+||+| ++|+|+++++ +++++|+|+|++.|+. +.++. ...+.+++.++|++|+++|++.|++|+
T Consensus 220 ~~~K~a~fPfH~WLPda~-~APtpvSa~L~sat~~K~Gvy~l~R~~-~l~~~-~~~~~~~l~~lg~lTml~gal~Al~Q~ 296 (800)
T PRK12646 220 AFTKSAQFPFHIWLPRAM-AAPTPVSAYLHSATMVKAGIFLLFRFT-PLLGL-SNMYIYIVTFVGLITMLFGSITALKQW 296 (800)
T ss_pred HHHHHhhhhchhhcCccc-CCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhh-hHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999998 5999999976 7799999999999985 55543 234567788999999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcch--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhccc
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTK--------------ISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~--------------~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~ 518 (1178)
|+||++|||||+|+||++++++.++. .+..++++|+++|++.|+.+|+++|.+++++|+|++++++
T Consensus 297 DlKrlLAYSSIsq~G~il~~lgig~~~~~~~~~~~~~~~~~~~~~al~~li~Hal~Ka~LFl~aG~i~~~~gtr~i~~l~ 376 (800)
T PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILS 376 (800)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccHHHhc
Confidence 99999999999999999987766432 3578899999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh----------HHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy5224 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF----------CIGVLTSTALIFSAAYSLCLSKNIIF 588 (1178)
Q Consensus 519 gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~----------~~~~~~~~~~~ls~~y~l~~~~~~~~ 588 (1178)
|+.+++|.++.++.++.+|++|+||++||++|+++++++.+.+. +..++.+++++++.+|++|+.+++++
T Consensus 377 GL~~~~P~~~~~~~i~~lSlaGlPP~~GF~sK~~i~~a~~~~~~~~~~~~~~~~~l~~i~~l~svls~~Y~lr~~~~~f~ 456 (800)
T PRK12646 377 GMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFW 456 (800)
T ss_pred CHHHHCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999988642 34566788999999999999999999
Q ss_pred hhh
Q psy5224 589 VLG 591 (1178)
Q Consensus 589 g~~ 591 (1178)
|+.
T Consensus 457 g~~ 459 (800)
T PRK12646 457 GKY 459 (800)
T ss_pred CCC
Confidence 864
|
|
| >PRK12647 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-55 Score=538.88 Aligned_cols=367 Identities=22% Similarity=0.349 Sum_probs=327.0
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
+..+|.|++++++++++|++|.+|.+++++++.++.+|+.++ +++.++||.+++++..++++++.|+|++++|+|||
T Consensus 46 ~~~~W~p~lgi~~~~~~D~ls~~f~lli~~i~~lv~lys~~Y~~~~~~~~~f~~llllf~~~m~glvls~dl~~lfvfwE 125 (761)
T PRK12647 46 GGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125 (761)
T ss_pred EEeecccccCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 346899999999999999999999999999999999999543 23456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIA 373 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g 373 (1178)
++++++|.|+++++++ ++.++++||++++.+|+.++|.|+.++|..+| |+|+.++.+... +.........++++|
T Consensus 126 l~si~sy~LI~~~~~~~~~~~Aa~kyli~t~~Gsl~lL~gi~lly~~tG-t~~~~~l~~~~~~~~~~~~~~~~~~lil~g 204 (761)
T PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG-TYSLSELLASGDVIREHPLYLAILLLVLGG 204 (761)
T ss_pred HHHHHHHHhheeeCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcHHHHHhhhcccccchHHHHHHHHHHHH
Confidence 9999999999998864 56899999999999999999999999998888 999988754321 112223456678899
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
+++|+|++|||+|+||+| ++|+|+++++ +++++|+|+|++.|+... +.. ...+.+++..+|++|+++|++.|++|+
T Consensus 205 ~~~K~a~fPfH~WLP~a~-~aptpvSa~L~sat~vK~Gvy~l~R~~~~-~~~-~~~~~~~l~~lg~lT~l~ga~~al~Q~ 281 (761)
T PRK12647 205 AFTKSAQFPFHFWLPNAM-EAPTPVSAYLHSATMVKAGIYLLARLNPV-LGG-TPLWQTILPLFGGLTMLTGALLAVRQT 281 (761)
T ss_pred HHHHHhhcccchhcchhc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-hHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999998 6999999976 779999999999997533 322 234567888999999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+||++++++.++..+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..+.
T Consensus 282 dlKrlLAYSSIsqlG~i~~~lg~~~~~~~~~~l~~li~Hal~K~~LFl~~G~i~~~~gt~~i~~l~Gl~~~~P~~~~~~~ 361 (761)
T PRK12647 282 DLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAAL 361 (761)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHhcCchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNFC---IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~---~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||+.||++|+++++++.+.+.+ ..++..+++++++.|++|.+++.++|+.
T Consensus 362 i~~lSlaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~~~~l~s~lt~~y~l~~~~~~f~g~~ 423 (761)
T PRK12647 362 LAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGKL 423 (761)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987643 3456678999999999999999999865
|
|
| >PRK08668 NADH dehydrogenase subunit M; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-54 Score=533.31 Aligned_cols=365 Identities=25% Similarity=0.427 Sum_probs=321.9
Q ss_pred hcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy5224 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303 (1178)
Q Consensus 225 w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~ 303 (1178)
|.+..++++.+++|++|.+|.+++++++.++.+|+.++ +++.++|+.+++++..++++++.|+|++++|++||++++++
T Consensus 55 ~~~~~~~~~~l~~D~ls~~~~ll~~~v~~l~~ly~~~y~~~~~~~f~~~~l~~~~~~l~~~~s~dl~~l~v~~El~~l~s 134 (610)
T PRK08668 55 TLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSS 134 (610)
T ss_pred EEecCCeeEEEEEchHHHHHHHHHHHHHHHHHHHHccccccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 76666788888999999999999999999999998443 44556788888899999999999999999999999999999
Q ss_pred HHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh--hhhHHHHHHHHHHHHHHh-hcCC
Q psy5224 304 FIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI--TKIEQIWLFITFFIAFAI-KIPI 380 (1178)
Q Consensus 304 ~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~-K~~~ 380 (1178)
|.++.. +++++.+++.||++++.+||.++++|+.++|..+| ++|+.++.+... .+....+...++++|+++ |+|+
T Consensus 135 ~~Li~~-~~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~g-t~~~~~l~~~~~~~~~~~~~~~~~lll~~~~~~K~g~ 212 (610)
T PRK08668 135 FMMVPM-GKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG-TFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGI 212 (610)
T ss_pred HHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHhhhcccCchHHHHHHHHHHHHHHHHHhcc
Confidence 999975 55677899999999999999999999999988777 888877654311 122334455677789999 9999
Q ss_pred CcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhh-----hchh-----hHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLP-----IFPD-----ASYYFSNLIITLSLISIIYISLIAMV 450 (1178)
Q Consensus 381 ~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~-----~~~~-----~~~~~~~~l~~~~~~s~~~g~~~al~ 450 (1178)
+|||.|+||+|+++|+|++++++++++|+|+|+++|+... .+++ ....+..++.++|++|+++|++.|++
T Consensus 213 fPfH~WLP~a~~~apt~vSalls~~~~K~g~y~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg~~t~l~g~~~al~ 292 (610)
T PRK08668 213 FPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMAIL 292 (610)
T ss_pred CchhhhhhhhhCcCChHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994321 1111 11235677889999999999999999
Q ss_pred ccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHH
Q psy5224 451 QIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVF 530 (1178)
Q Consensus 451 q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~ 530 (1178)
|+|+||++|||||+|+||++++++.+++.+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.+++|.++..
T Consensus 293 Q~dlKrlLAYSSIsq~G~i~~~l~~~~~~~~~~al~~~i~Ha~~k~~LFl~~G~i~~~~gt~~i~~l~Gl~~~~P~~~~~ 372 (610)
T PRK08668 293 QEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAM 372 (610)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHhcChhhhCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 531 FIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 531 ~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.++.+|++|+||+.||++||++++++.+.+ ++..++++++++++..|++|..++.++|+.
T Consensus 373 ~~i~~lslaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~~~~s~ls~~y~lr~~~~~f~g~~ 434 (610)
T PRK08668 373 YLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQL 434 (610)
T ss_pred HHHHHHHHcCCCccccHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999876 445667788999999999999999998863
|
|
| >COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-54 Score=515.77 Aligned_cols=365 Identities=31% Similarity=0.565 Sum_probs=326.7
Q ss_pred cchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhh---hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKK---KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 222 ~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
...|.+++++. +..|.+|..|.+.++++++++.+|+.++.+ +.+.|+.+.+++.+|+.+.+.++|++++|+|||+
T Consensus 60 ~~~~~~~~gi~--~~~D~ls~~f~l~~~lv~~~~~iys~~~~~~~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei 137 (504)
T COG0651 60 LGGWLAPFGIV--LAADPLSAIFLLIIALVGLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEI 137 (504)
T ss_pred cccCCCCcceE--EEechhhHHHHHHHHHHHHHHHHHhHHHHhcccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34577777755 568999999999999999999999944433 3456888888999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIAF 374 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g~ 374 (1178)
+++++|.|+..++++ ++.+++.||++.+.+|+.+++.|+.++|..+| |+|+.++.+.. .++........++++||
T Consensus 138 ~~isS~~Li~~~g~~~~~~~a~~~Y~i~~~~~~~l~L~gv~lly~~tG-tln~~~i~~~~~~~~~~~~~~~~~~L~ligf 216 (504)
T COG0651 138 MTLSSYFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATG-TLNFADIALKLSSELDPGLGIAAFLLLLIGF 216 (504)
T ss_pred HHHHHHHHHHHcCCchHhhhhhhHhhhhhhHHHHHHHHHHHHHHHHhC-cccHHHHHHHhhcccCchHHHHHHHHHHHHH
Confidence 999999999996654 44589999999999999999999999999999 99999887653 23445566788899999
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhH--HHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS--YYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~--~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
++|+|+||+|.|+||+|.++|+|+++++|++++|+|+|+++|+....++... ..+.+++..+|.+|+++|.+.|+.|+
T Consensus 217 ~~KaglfPlh~WLP~A~~~ap~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~ 296 (504)
T COG0651 217 GVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQK 296 (504)
T ss_pred HHhcccCchhhhhhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999877776654 46788999999999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+|+++++++.+++.+..++++|.++|++.|+.+|+.+|.+.+++|+|++++++|+.|++|+++..+.
T Consensus 297 d~KRlLAYsti~q~G~illg~~ig~~~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~g~~~i~~~gGl~~~~P~~~~~~~ 376 (504)
T COG0651 297 DIKRLLAYSTVSQMGYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTGTRDLEKLGGLAKRMPLTAVAFL 376 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhCCCcHHHhcChHhhChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhh------hHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFN------FCIGVLTSTALIFSAAYSLCLSKNIIFV 589 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~------~~~~~~~~~~~~ls~~y~l~~~~~~~~g 589 (1178)
++.+|++|+||++||++||+++++..+.+ ++...++..++.....++.|...+.+++
T Consensus 377 i~~lsl~GlPp~~GF~sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 439 (504)
T COG0651 377 IGALSLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIFMLLFFG 439 (504)
T ss_pred HHHHHHcCCCCcccHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999966543 2344556777777778888888777776
|
|
| >PRK06525 hydrogenase 4 subunit D; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-54 Score=516.88 Aligned_cols=356 Identities=25% Similarity=0.392 Sum_probs=313.4
Q ss_pred chhhhccchhHhHHHHHHHHHHHHHHHhhhhh-h---------hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy5224 231 IYYFLGIDGLSLWFIPLTAFITLIIILISLDI-K---------KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATL 300 (1178)
Q Consensus 231 i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~---------~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~ 300 (1178)
+++.+++|++|.++..++.++++++.+++.++ + ++.++||.+++++..++++++.|+|++++|++||+++
T Consensus 67 ~~~~~~~D~ls~~~~~l~~~~~~~~~l~s~~y~~~~~~~~~~~~~~~~f~~l~ll~~~~~~~~~~s~dl~~~~v~~El~~ 146 (479)
T PRK06525 67 ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITG 146 (479)
T ss_pred ceEEEEEcHHHHHHHHHHHHHHHHHHHHhHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45678899999999999999999999998432 1 1346899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCC
Q psy5224 301 IPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPI 380 (1178)
Q Consensus 301 i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~ 380 (1178)
+++|.++..++++++.||++||++++.+||.+++.++.++|..+| ++|+.++.+.+ +..+.....++++|+.+|+|+
T Consensus 147 l~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~ll~~i~~ly~~~g-~~~~~~~~~~~--~~~~~~~~~~l~~~~~~K~~~ 223 (479)
T PRK06525 147 LCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG-TFALSALSGLH--GSLKYLVFLGILFAAWGKSAQ 223 (479)
T ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHhcC--chHHHHHHHHHHHHHHHHHhh
Confidence 999999999888888999999999999999999999998888777 88887664321 222334455677899999999
Q ss_pred CcccccccCccCCCChHHHHHHH-HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q psy5224 381 WPMHTWLPDAHVEAPTEGSVILA-AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459 (1178)
Q Consensus 381 ~PfH~Wlp~~~~~ap~~~s~~ls-~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllA 459 (1178)
+|||.|+||+| |+|+|++++++ +++.|+|+|+++|+.....+. ...+..++.+++++|+++|++.|++|+|+||++|
T Consensus 224 ~PfH~WlPda~-~ap~~vsa~l~~~~~~K~g~~~l~r~~~~~~~~-~~~~~~~l~~l~~~s~i~g~l~al~Q~dlKrllA 301 (479)
T PRK06525 224 LPFYSWLPDAM-EAPTPASAYLHAASMVKVGVYIFARAIQSMGPI-PHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301 (479)
T ss_pred ccchhhccccc-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 69999999886 479999999999986544432 2344567888999999999999999999999999
Q ss_pred HhchhHHHHHHHHHHh---cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHH
Q psy5224 460 YSSIAHMGFVTLGIFM---LTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSL 536 (1178)
Q Consensus 460 ySsi~~~G~i~~~~~~---~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~l 536 (1178)
||||+|+||++++++. +++.+..++++|+++|+++|..+|+++|.+++++|+|++++++|+.+++|.++..+.++.+
T Consensus 302 YSSI~~~G~il~~l~~~~~~~~~~~~~~l~~~~~h~~~k~~lF~~~g~l~~~~~~~~i~~l~Gl~~~~P~~~~~~~i~~l 381 (479)
T PRK06525 302 YSTITQLGYMFFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeHHHhcChhhhChHHHHHHHHHHH
Confidence 9999999999999986 5778899999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCcccchHHHHHHHHHHhhh---HHH---HHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 537 ANCSLPGTSGFIGEFMIILSAVKFNF---CIG---VLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 537 s~~GlPp~~gF~~k~~i~~~~~~~~~---~~~---~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|++|+||+.||++|++++.++.+.+. +.. ++.+++++++..|++|.++++++++.
T Consensus 382 sl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~l~~~~i~~~~s~ls~~y~lr~~~~~~~g~~ 442 (479)
T PRK06525 382 AITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLRWFGRVVFGEP 442 (479)
T ss_pred HHhcccccchHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999998763 222 45677899999999999999999875
|
|
| >COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-55 Score=518.65 Aligned_cols=368 Identities=29% Similarity=0.472 Sum_probs=334.0
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
....|.|..+.++.+.+|++|..|.++++.+++++.+|+.+| +++.+|||+.+.++..+|.+++.|+|++.+|++||
T Consensus 56 ~~~~W~~~~~~~~~~~iD~Ls~lm~~lVt~vg~LI~iYsi~YM~~d~~~~RFfa~l~lF~~sMl~lVlSdNll~l~~~WE 135 (606)
T COG1009 56 TLYTWLPSGGLNFGLRIDGLSLLMALLVTGVGFLIHLYSIGYMSHDPGLGRFFAYLLLFTGSMLGLVLSDNLLLLFVFWE 135 (606)
T ss_pred EEEEeeeeCCceeEEEEchHHHHHHHHHHHHHHHHHHHHHHHhccCCCcChHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 466899999889999999999999999999999999999433 34578999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh----hhhhhHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL----SITKIEQIWLFITFFI 372 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~~~~~~~ 372 (1178)
.+++++|.||++|.++ +..++|.|-++.+.+|+..+++|++.++..+|.+.+..++.+. +..........+++++
T Consensus 136 ~~gl~SyLLIGfw~~~~~a~~aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~~~~~~~~~~~~~~~~~~lll~~ 215 (606)
T COG1009 136 LTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLL 215 (606)
T ss_pred HHHHHHHHhcccccCCcchhHHHHHHhhhhcchHHHHHHHHHHHHHHhCccccHHHHhhhcchhhhcchHHHHHHHHHHH
Confidence 9999999999999965 6689999999999999999999999999998866666666543 1122234566778899
Q ss_pred HHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQ 451 (1178)
Q Consensus 373 g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q 451 (1178)
|-..|.++||||.||||+ .|+|||+|+++ +++|+|+|+|.+.|+. |.+.. .+.+.+++..+|.+|+++|+..|++|
T Consensus 216 Ga~~KSAQfPfH~WLpdA-MegPTPVSAliHaATMV~AGvyLvaR~~-pif~~-sp~~~~~v~~vG~iTal~~a~~al~Q 292 (606)
T COG1009 216 GAFGKSAQFPFHTWLPDA-MEGPTPVSALLHAATMVKAGVYLLARLS-PLFAL-SPEALWLVILVGAVTALLAALIALVQ 292 (606)
T ss_pred HhhhhhcccchHhhhhhh-hcCCChHHHHHHHHHHHHcchhHHhHHH-HHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 66999999998 9999999999999974 66654 34456888999999999999999999
Q ss_pred cchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHH
Q psy5224 452 IDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFF 531 (1178)
Q Consensus 452 ~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~ 531 (1178)
+|+||++||||++|+|||.++++.++ .+..++++|+++|++.|+.||+++|.+.+++|+||+++++|+.|++|.+...+
T Consensus 293 ~DiKriLAYSTiSQLG~m~~a~Glg~-~a~~aAifHL~tHA~FKA~LFL~aG~vih~~~trdi~kmggL~k~mPit~~~~ 371 (606)
T COG1009 293 NDIKRILAYSTISQLGYMFVALGLGS-LAYEAAIFHLVTHAFFKALLFLSAGSVIHATGTRDIRKLGGLRKKMPITFVAF 371 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHhhchhHHHcccccHHHhhcHHHhchHHHHHH
Confidence 99999999999999999999999987 78899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCcccchHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 532 IIFSLANCSLPGTSGFIGEFMIILSAVKFN----FCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 532 ~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~----~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
.++.++++|+||++||++|..++.++.+.+ .+...+..++.++++.|.+|+....|+|+..
T Consensus 372 ~ig~lalaGvpPf~GF~SK~~i~~~~~~~~~~~~~~~~~~~~i~~~~T~~ys~r~~~~~F~g~~~ 436 (606)
T COG1009 372 LIGALALAGVPPFAGFFSKDMILEAALAASHLSGGLLLLLALIGALLTAFYSFRLIFLVFFGKPR 436 (606)
T ss_pred HHHHHHHhCCCcccHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 999999999999999999999999999887 5677788999999999999999999999854
|
|
| >TIGR01960 ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-54 Score=523.25 Aligned_cols=361 Identities=20% Similarity=0.301 Sum_probs=317.3
Q ss_pred hhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 224 IWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 224 ~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
+|.+. +++++.+.+|++|..+.++++.+++++.+|+..+ +++.++|+.+++++..++++++.|+|++++|++||+
T Consensus 72 ~w~~~~~~~~~~~~~~D~ls~~~~~~~~~v~~lv~lys~~ym~~~~~~~rf~~~l~lf~~~m~glv~s~nl~~l~v~wE~ 151 (606)
T TIGR01960 72 HWLQAAGLDLTFALEISSVSTGALVLITGLNLLAQIFALGYMEKDWGLARFFALLGLFEAGLGGLVLSDSLFFSYVLLEI 151 (606)
T ss_pred eccccCCcceEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 46553 4455678899999999999999999999999433 223568999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh----hhhhhHHHHHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL----SITKIEQIWLFITFFIA 373 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~~~~~~~g 373 (1178)
+++++|.|+.+|++ +++.+|+.||++++.+||.++++|+.++|..+| |+|+.++.+. ..++....+...++++|
T Consensus 152 ~~l~sy~LI~~~~~~~~~~~Aa~kyfi~~~iGs~~lLlgi~~l~~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~lll~ig 230 (606)
T TIGR01960 152 LTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPLAG-SWNYDDLAQWAATANVNPTTATLLGLALIAG 230 (606)
T ss_pred HHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHhhcccCCchHHHHHHHHHHHH
Confidence 99999999998864 557799999999999999999999999998888 8988876432 11222334455667889
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
++.|+|++|||.|+||+| |+|+|++++++++++|+|+|++.|+. +.++.. ....+++.++|.+|+++|++.|++|+|
T Consensus 231 ~~~Ksa~fPfH~WLPdAm-e~PtpvSaLlaa~mv~aGvy~l~R~~-~~~~~~-~~~~~~l~~lg~~T~l~ga~~al~Q~D 307 (606)
T TIGR01960 231 PTGKCAQFPLHLWLDEAM-EGPNPASILRNSVVVATGAWVLIKLQ-PVLTLS-PVALTALIAIGSVTAIGGSLIAIAQID 307 (606)
T ss_pred HHHHhccccccccchhhc-cCCcHHHHHHHHHHHHHHHHHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999996 68999999999999999999999974 444322 234567888999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
+||++|||||+|+||++++++.++. .++++|+++|++.|+.+|+++|.++++.|++|+++++|+.+++|.++.++.+
T Consensus 308 lKriLAYSTIsqlG~m~l~lg~~~~---~~al~hl~~Ha~~Ka~LFl~aG~i~~~~~~~di~~~gGl~~~~P~~~~~~~i 384 (606)
T TIGR01960 308 IKRALSYSVSAYMGLVFIAVGLGQG---DLALLLLLTHAIAKALLFMSIGSIIWNTVTQDLTELGGLWSRRPISGLSFVV 384 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHhCChHhhhHHHHHHHHH
Confidence 9999999999999999999988754 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.++++|+||++||++|+.+++++.+.+++...+..+++++++.|++|++++.++|+.
T Consensus 385 ~~lal~GlPp~~GF~sK~~Il~~~~~~~~~~~~i~ll~s~lt~~y~~r~~~~~f~g~~ 442 (606)
T TIGR01960 385 GSAGLIAVPPLGSFWAWLKLADGLWATSPWLVGVLLVVNLLTAFNLTRVFRLVFGGEA 442 (606)
T ss_pred HHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998877766677888999999999999999999865
|
This family represents a subfamily of NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighboring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby. |
| >TIGR01770 NDH_I_N proton-translocating NADH-quinone oxidoreductase, chain N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-54 Score=511.55 Aligned_cols=357 Identities=22% Similarity=0.338 Sum_probs=314.9
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
.+.+|++|..+..++.+++..+.+++.++ +++.++|+.++++...|+++++.|+|++++|++||++++++|.|++.
T Consensus 65 ~~~~D~~s~~~~~~i~~~~~~~~~~~~~y~~~~~~~~~~f~~l~l~~~~g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~ 144 (468)
T TIGR01770 65 FFIVDNFSLIIKLILLLSTLLLFFFALSYFSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAAL 144 (468)
T ss_pred ceeEchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999999998433 12345899999999999999999999999999999999999999998
Q ss_pred c-CCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh----hhhHHHHHHHHHHHHHHhhcCCCccc
Q psy5224 310 W-GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI----TKIEQIWLFITFFIAFAIKIPIWPMH 384 (1178)
Q Consensus 310 ~-~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~K~~~~PfH 384 (1178)
+ +++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+... ++........++++|+++|+|++|||
T Consensus 145 ~~~~~~s~eaa~kYfi~~~~~s~~lL~g~~lly~~~G-s~~~~~i~~~~~~~~~~~~~~~~~~~lil~g~~~K~g~~PfH 223 (468)
T TIGR01770 145 KRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG-SLNFEDLLLFLSNLGNDISLLLLGIVFILVGLLFKLSAVPFH 223 (468)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhccccc
Confidence 7 46667899999999999999999999999998887 888877653211 11123345667889999999999999
Q ss_pred ccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 385 TWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 385 ~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
.|+||+|+++|+|+++++++++|..+.+.++|+....+++....+.+++.++|++|+++|++.|++|+|+||++|||||+
T Consensus 224 ~WlPd~y~~apt~vsalls~~~K~~~~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrlLAYSSI~ 303 (468)
T TIGR01770 224 MWVPDVYEGAPTPVTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLLICAVLSMLIGNFGALAQKKVKRLLAYSSIS 303 (468)
T ss_pred ccchhhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999998766556677899876666654456678888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-ccchhcccchhhhhHHHHHHHHHHHHhhcCCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN-QMK-TRLISNFGGIINVIPHFSVFFIIFSLANCSLP 542 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~-~~~-~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlP 542 (1178)
|+||+++++..+++.+..++++|+++|++++.++|.+.+.+++ +.+ ++++++++|+.+++|.++..+.++.+|++|+|
T Consensus 304 ~~G~il~~l~~~~~~g~~~~~~~~~~y~~~~~~lF~~~~~~~~~~~~~~~~l~~l~Gl~~~~P~~a~~~~i~~lsl~GiP 383 (468)
T TIGR01770 304 HVGYILIGLLAGTLEGIKAVLFYIFIYALMSIGAFGVLALLRSRKDEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIP 383 (468)
T ss_pred HHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccHHHhhChhhhChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999875 545 89999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 543 GTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 543 p~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|++||++|+.++.++.+.+. +...+.++++++++.||+|+.+++++++.
T Consensus 384 P~~GF~~K~~i~~~~~~~~~~~l~~i~~l~s~ls~~yylr~~~~~f~~~~ 433 (468)
T TIGR01770 384 PLAGFFGKFYVFFALLKSGLYLLAVIAILTSVISAFYYLRVVKVMYFDKP 433 (468)
T ss_pred ccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998774 56677788999999999999999999865
|
NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. |
| >PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-54 Score=513.70 Aligned_cols=358 Identities=20% Similarity=0.317 Sum_probs=312.8
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh-hh---hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI-KK---KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
.+.+|+++.++..++.+++.++.+++.++ ++ +.++||.++++...|+++++.|+|++++|++||++++++|.|++.
T Consensus 73 ~~~~D~ls~~~~~l~~~~~~~~~l~s~~y~~~~~~~~~~f~~lll~~~~g~~~l~~s~dl~~l~v~~El~sl~~y~Li~~ 152 (513)
T PRK02504 73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGY 152 (513)
T ss_pred ceeEchHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999533 21 345799999888999999999999999999999999999999998
Q ss_pred cCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh--hhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 310 WGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI--TKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 310 ~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
+++ +++.||++||++++.+||.++++|+.++|..+++++|+.++.+... +.........++++|+++|+|++|||.|
T Consensus 153 ~~~~~~s~eA~~KYfi~~~~gs~~lL~gi~lly~~~~Gs~~~~~l~~~~~~~~~~~~~~~~~l~l~g~~~K~~l~PfH~W 232 (513)
T PRK02504 153 MKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIAFKISAVPFHQW 232 (513)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 764 4568999999999999999999999999887723888877754211 1111223445677899999999999999
Q ss_pred ccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHH
Q psy5224 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHM 466 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~ 466 (1178)
+||+|+++|+|+++++++++|+.+.+.++|+....++.....+.+++.+++++|+++|++.|++|+|+||++|||||+|+
T Consensus 233 lPday~~ap~~vsalls~~~K~a~~~~l~R~~~~~~~~~~~~~~~~l~~l~~lS~i~G~l~Al~Q~dlKRlLAYSSIsh~ 312 (513)
T PRK02504 233 TPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312 (513)
T ss_pred chhhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999875555555679987666665444566788899999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcc
Q psy5224 467 GFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSG 546 (1178)
Q Consensus 467 G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~g 546 (1178)
||+++++..++..+..++++|+++|.+++.++|.+++.++++.|++++++++|+.+++|.++..+.++.+|++|+||+.|
T Consensus 313 G~illgl~~~~~~g~~~~~~yl~~y~~~~~~lF~~~~~~~~~~~~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPP~~G 392 (513)
T PRK02504 313 GFVMIGLVAGTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392 (513)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccHHHhcChhhcCcHHHHHHHHHHHHHcCCCccch
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 547 FIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 547 F~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|++|+.++.++.+.+ ++..++.+++++++++||+|+.+++++++.
T Consensus 393 F~~K~~i~~~~~~~~~~~l~~i~ll~s~is~~yylri~~~~~~~~~ 438 (513)
T PRK02504 393 FFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVIKMMVVKEP 438 (513)
T ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999877 456677788999999999999999998864
|
|
| >PRK08667 hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-54 Score=524.29 Aligned_cols=361 Identities=24% Similarity=0.433 Sum_probs=314.1
Q ss_pred hhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhhh------hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIK------KKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 224 ~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.|.++++ +.+++|++|.++.+++++++..+.+|+.++. ++.+.|+.++.++..++++++.|+|++++|++||
T Consensus 64 ~~~~~~~--~~l~vD~ls~~f~lli~~v~~~~~lys~~y~~~~~~~~~~~~~~~~~~l~~~~m~~vv~s~dl~~f~v~~E 141 (644)
T PRK08667 64 GIAPGLD--ITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWE 141 (644)
T ss_pred ccCCCce--EEEeecHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4666555 4567999999999999999999999984331 1234567788889999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHh
Q psy5224 298 ATLIPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI 376 (1178)
Q Consensus 298 ~~~i~~~~Li~~~-~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (1178)
++++++|.|+..+ +++++.+|++||++++.+|+.++++|+.++|..+| ++|+.++.. +.......+.++++||++
T Consensus 142 lmsl~sy~Li~~~~~~~~~~~Aa~kY~i~~~~gs~~lL~g~~lly~~tG-s~~~~~l~~---~~~~~~~~~~l~ligf~~ 217 (644)
T PRK08667 142 IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG-SFELSPLGA---SAGILSLVFLLLFLGFGI 217 (644)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcHHHHhc---cchHHHHHHHHHHHHHHH
Confidence 9999999999875 45677899999999999999999999999998888 888877542 122234456778899999
Q ss_pred hcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q psy5224 377 KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKK 456 (1178)
Q Consensus 377 K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~kr 456 (1178)
|+|++|||.|+||+|+++|+|+++++|+++.|+|+|+++|+....++.. .++..++.++|++|+++|++.|++|+|+||
T Consensus 218 Kagl~PfH~WLP~a~~~APs~vSallsgvm~K~giy~llR~~~~~~~~~-~~~~~~l~~lg~~S~i~G~l~Al~Q~dlKr 296 (644)
T PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPE-LWWGVLILLAGSISALLGVIYALKEHDLKG 296 (644)
T ss_pred HHhhcccHhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 9999999999999999999999999999999999999999865554332 345677889999999999999999999999
Q ss_pred HHHHhchhHHHHHHHHHHhc-----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhH
Q psy5224 457 LIAYSSIAHMGFVTLGIFML-----------TKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525 (1178)
Q Consensus 457 llAySsi~~~G~i~~~~~~~-----------~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p 525 (1178)
++|||||+|+|+++++++.. ...+..++++|+++|++.|+.+|+++|.+++++|+|++++++|+.|++|
T Consensus 297 lLAYSSI~~~G~il~glg~~~~~~~~g~~~l~~~~l~gal~h~l~Hal~K~~LFl~aG~v~~~~gt~~i~~lgGL~~~mP 376 (644)
T PRK08667 297 LLAYSSIENIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMP 376 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHhcChHhhCH
Confidence 99999999999999998863 2357889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh----hH-------HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN----FC-------IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 526 ~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~----~~-------~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.++.++.+|++|+||++||++||++++++++.+ +. ...+..+++.+++.|+.|.+...++|++
T Consensus 377 ~~a~~~li~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~l~~~l~~~~~~k~~~~~f~g~p 453 (644)
T PRK08667 377 YTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILLFSVLAIFALTSALAAACFVKAFGITFLAMP 453 (644)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999998763 11 2234577899999999999999999864
|
|
| >PRK07390 NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-54 Score=521.95 Aligned_cols=361 Identities=19% Similarity=0.321 Sum_probs=318.4
Q ss_pred hhcc--cccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 224 IWID--YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 224 ~w~~--~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
+|.+ .+++++.+.+|++|..++.+++++++++.+|+.++ +++.++|+.++.++..++++++.|+|++++|++||+
T Consensus 72 ~w~~~~~~~~~~~~~~D~ls~~~l~lv~~v~~lv~~ys~~ym~~~~~~~rf~~~l~lf~~~m~glv~s~nl~~l~v~wE~ 151 (613)
T PRK07390 72 PWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEI 151 (613)
T ss_pred eeeecCCcCeeEEEEehhhhHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 4554 24566778899999999999999999999999433 223568999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh----hhhhHHHHHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS----ITKIEQIWLFITFFIA 373 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~----~~~~~~~~~~~~~~~g 373 (1178)
+++++|.|+++|++ +++.+|+.||++++.+|+.++++|+.++|..+| |+|+.++.+.. .++....+...++++|
T Consensus 152 ~~l~sy~LI~~~~~~~~~~~Aa~k~fi~~~vGs~~lLlgi~~l~~~~g-tl~~~~l~~~~~~~~~~~~~~~~~~~lllig 230 (613)
T PRK07390 152 LTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAG-TLNFSDLAAWAATANLDPLTATLLGLALIAG 230 (613)
T ss_pred HHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcHHHHHHHhhcccCChhHHHHHHHHHHHH
Confidence 99999999998764 457799999999999999999999999998888 88888765321 1222334445567789
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
+..|+|++|||.|+||+| |+|+|++++++++++|+|+|++.|+. +.++.. .....++.++|++|+++|++.|++|+|
T Consensus 231 ~~~Ksa~fPfH~WLPdA~-e~PtpvSaLl~a~mv~aGvy~l~R~~-pl~~~~-~~~~~~l~~lg~~T~l~ga~~al~Q~D 307 (613)
T PRK07390 231 PTGKCAQFPLHLWLDEAM-EGPNPASILRNSVVVATGAWVLIKLQ-PVLALS-PVALTVLIVIGTVTAIGASLVAIAQID 307 (613)
T ss_pred HHHHhhhcccchhhhhhc-cCCcHHHHHHHHHHHHHHHHHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999997 68999999999999999999999974 555432 234567888999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
+||++||||++|+||++++++.++ ..++++|+++|++.|+.+|+++|.++++.|++|+++++|+.+++|.++.++.+
T Consensus 308 iKrlLAYSTisqlG~m~l~lg~~~---~~~al~hl~~Ha~~Ka~LFl~aG~v~~~~~~~di~~mgGl~~~~P~~~~~fli 384 (613)
T PRK07390 308 IKRALSYSTSAYLGLVFIAVGLQQ---PDIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLV 384 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCceeHHHhcChHhhhHHHHHHHHH
Confidence 999999999999999999998864 36799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.++++|+||++||++|+.++.++.+.+++...+..+++++++.|++|++++.++|+.
T Consensus 385 ~~lal~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~l~s~lt~~y~~r~~~~~f~g~~ 442 (613)
T PRK07390 385 GSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKP 442 (613)
T ss_pred HHHHHHHhhHhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999887777777888999999999999999999865
|
|
| >MTH00062 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-52 Score=485.86 Aligned_cols=343 Identities=25% Similarity=0.434 Sum_probs=296.4
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcC-C
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWG-G 312 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~-~ 312 (1178)
.+++|++|..+..++.+++..+.+...+..+ ++++.++++...++++++.++|++.+|++||++++|+|.++..++ +
T Consensus 40 ~~~~D~~s~~l~~L~~~~~~~~~l~~~~~~~--~~~~~~~ll~~~g~~~~f~s~dl~~fyv~~El~~ip~~~Li~~~~~~ 117 (417)
T MTH00062 40 LFIFDSLSFYLILLVLFLGLYSQVMFYNLLS--GVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPY 117 (417)
T ss_pred ceeeCHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999998887765532222 234445556777899999999999999999999999999998755 4
Q ss_pred CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccC
Q psy5224 313 SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHV 392 (1178)
Q Consensus 313 ~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~ 392 (1178)
+||.+|++||+.|+.+||..+++|+.++|..+| ++|+.++.+.+ ..+.+...++++||++|+|++|||.|+||+|+
T Consensus 118 ~er~~a~~~~~~Y~l~gsl~lL~gi~~ly~~~G-s~~~~~l~~~~---~~~~~~~~~~l~gf~~K~pl~PfH~WLPday~ 193 (417)
T MTH00062 118 SERYLASWYFLGYLLLTSLPLLLCLLYLSLVNG-SFNFSDWGSDD---SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHA 193 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cchHHHHHhhc---chHHHHHHHHHHHHHHHhhhhccccccchhhc
Confidence 578899999999999999999999999998887 99988875431 22334456688999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHH
Q psy5224 393 EAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472 (1178)
Q Consensus 393 ~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~ 472 (1178)
|||+|+++++||++.|+|.|+++|+..+.+++. +.+.+...+++|+++ ++.|++|+|+||++|||||+|+|++++|
T Consensus 194 eApt~vS~~Lsgvl~KlG~ygl~R~~~~~~~~~---~~~~l~~~~~~sii~-~l~Al~Q~DlKRlLAYSSIsHmG~illg 269 (417)
T MTH00062 194 EASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS---FLGYLFLCCLFSVFF-LITACSELDGKRWLAFLSLSHILVPVLG 269 (417)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999887766653 235667788889998 9999999999999999999999999999
Q ss_pred HHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHH
Q psy5224 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFM 552 (1178)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~ 552 (1178)
+..+++.+..++++|+++|+++++++|.++|.+++|+|+|++++++|+.+++|.++..+.++.+|++|+||+.||++|++
T Consensus 270 i~~~~~~g~~g~~~~~l~Hgl~~~~lF~~~~~l~~~~gtr~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~gF~~e~~ 349 (417)
T MTH00062 270 LFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVF 349 (417)
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHhcChhhhCHHHHHHHHHHHHHHHhcchhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy5224 553 IILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNII 587 (1178)
Q Consensus 553 i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~ 587 (1178)
++.++.+. +...+...+...++..|.+..+....
T Consensus 350 i~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~ 383 (417)
T MTH00062 350 LVSSSFGV-LVYLLFWCFYLFFGGLVPLILLGHLL 383 (417)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 55555555666677777665544443
|
|
| >PRK07376 NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-53 Score=522.94 Aligned_cols=361 Identities=22% Similarity=0.340 Sum_probs=312.3
Q ss_pred hhcccc--cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 224 IWIDYF--NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 224 ~w~~~~--~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
+|.+.. ++++.+.+|.+|..+.+++++++.++.+|+..+ +++.++||.+++++..++++++.|+|++++|++||+
T Consensus 74 ~w~~~~~~~~~~~~~iD~ls~~~~~lv~~v~~lv~lys~~ym~~~~~~~~f~~~l~lf~~~ml~lv~s~nl~~lfv~wEl 153 (673)
T PRK07376 74 EWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWEL 153 (673)
T ss_pred EeeccCCcceeEEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 466543 344556799999999999999999999999533 223457899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh--------hhhHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI--------TKIEQIWLFIT 369 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~--------~~~~~~~~~~~ 369 (1178)
+++++|.|+++|++ +++.+|+.||++++.+||.++++|+.++|..+| ++|+.++.+... +........++
T Consensus 154 ~~l~sy~LI~~~~~~~~~~~Aa~kyfi~~~vGs~~lLlgi~~ly~~~G-sl~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 232 (673)
T PRK07376 154 VGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATG-SFDFDGIADRLSELVSSGAVSGWLALLLCIL 232 (673)
T ss_pred HHHHHHHHheeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 99999999999874 456899999999999999999999999998888 888877643210 11122334567
Q ss_pred HHHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 370 FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448 (1178)
Q Consensus 370 ~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~a 448 (1178)
+++|+++|+|++|||.|+||+| |+|+|+++++ +++++|+|+|++.|+. +.+... ..+..++.++|++|+++|++.|
T Consensus 233 l~~G~~~Ksa~fPfH~WLPdA~-~~PtpvSAll~a~~mv~aGvy~l~R~~-~l~~~~-~~~~~~l~~lg~lT~l~ga~~A 309 (673)
T PRK07376 233 VFLGPMAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMY-PVFEQF-PAVMTVIAWTGAITAFLGASIA 309 (673)
T ss_pred HHHHHHHHHhhccchhhchhhh-cCCChHHHHHHHHHHHHHHHHHHHHHH-HHHHhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999 6799999987 5679999999999973 444322 2456788899999999999999
Q ss_pred HhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccchhcccc
Q psy5224 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK---------TRLISNFGG 519 (1178)
Q Consensus 449 l~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~---------~~~l~~~~g 519 (1178)
++|+|+||++|||||+|+||++++++.++ ..++++|+++|++.|+.+|+++|.+.++.+ ++++++++|
T Consensus 310 l~Q~diKrlLAYSSIsqlGym~l~lg~~~---~~~al~hl~~Ha~~Ka~LFl~aG~vi~~~~~~~~~~~~~~~di~~mgG 386 (673)
T PRK07376 310 LTQNDIKKGLAYSTISQLGYMVMAMGCGA---YSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGG 386 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcccHHHHHHccccCCCccccccHHHhcC
Confidence 99999999999999999999999998764 468999999999999999999999988876 599999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 520 l~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+++|.++.++.++.++++|+||++||++|+.+++++.+.+++...+.++++++++.|++|++...++|+.
T Consensus 387 L~~~~P~~~~~~~i~~lslaGiPP~~GF~sK~~Il~~~~~~~~~~~~i~ll~s~lt~~Y~~r~~~~~f~g~~ 458 (673)
T PRK07376 387 LRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEF 458 (673)
T ss_pred CcccCHHHHHHHHHHHHHHhhccchhhHHHhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999888666667889999999999999999999874
|
|
| >CHL00049 ndhB NADH dehydrogenase subunit 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-53 Score=505.66 Aligned_cols=357 Identities=19% Similarity=0.258 Sum_probs=310.9
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh-hh---hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI-KK---KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
.+++|+++.++..++.+++.++.++++++ ++ +..+|+.+++....++++++.|+|++++|++||++++++|.+++.
T Consensus 74 ~~~~D~ls~~~~~l~~~~~~~~~l~s~~~~~~~~~~~~~~~~lll~~~~g~~~~~~s~dl~~l~v~~El~si~~y~Li~~ 153 (494)
T CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGY 153 (494)
T ss_pred ceEEcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 35689999999999999999999998543 21 334788888888888888999999999999999999999999987
Q ss_pred cCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh----h-hhHHHHHHHHHHHHHHhhcCCCcc
Q psy5224 310 WGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI----T-KIEQIWLFITFFIAFAIKIPIWPM 383 (1178)
Q Consensus 310 ~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~----~-~~~~~~~~~~~~~g~~~K~~~~Pf 383 (1178)
++++ ++.||++||++++.+||.++++|+.++|..+++++|+.++.+... + +........++++|+++|+|++||
T Consensus 154 ~~~~~~~~~aa~KY~i~~~~gs~~lL~gi~~ly~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~gl~Pf 233 (494)
T CHL00049 154 TKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPF 233 (494)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHhhccc
Confidence 6644 568999999999999999999999998876644888877654211 1 112234566788899999999999
Q ss_pred cccccCccCCCChHHHHHHHHHHHHHHHHHH-HHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhc
Q psy5224 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGL-LRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462 (1178)
Q Consensus 384 H~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l-~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySs 462 (1178)
|.|+||+|+++|+|+++++++ ..|++.|++ +|+..+.++.....+.+++.+++++|+++|++.|++|+|+||++||||
T Consensus 234 H~WlPdvy~~ap~~vsalls~-~~K~~~~~~l~r~~~~~~~~~~~~~~~~l~~l~~ls~~~G~l~al~Q~dlKrlLAYSS 312 (494)
T CHL00049 234 HQWTPDVYEGSPTPVVAFLSV-TSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 312 (494)
T ss_pred cccChhhhCCCChHHHHHHHH-HHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999985 566666665 898766666544456678889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCC
Q psy5224 463 IAHMGFVTLGIFMLTKI-SIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSL 541 (1178)
Q Consensus 463 i~~~G~i~~~~~~~~~~-~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~Gl 541 (1178)
|+|+||+++++..+++. +..++++|+++|++++.++|.+++.+++++|++++++++|+.+++|..+.++.++.+|++|+
T Consensus 313 Is~~G~illgi~~~~~~~g~~~~l~y~~~y~~~~~~lF~~~~~~~~~~~~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~Gi 392 (494)
T CHL00049 313 IGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392 (494)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHhcChhhcChHHHHHHHHHHHHHhcc
Confidence 99999999999988765 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 542 PGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 542 Pp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
||+.||++|+.++.++.+.+. +..++.++++++++.||+|+.+++++++.
T Consensus 393 PP~~GF~~K~~i~~~~~~~~~~~l~~i~ll~S~ls~~yylri~~~~f~~~~ 443 (494)
T CHL00049 393 PPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRN 443 (494)
T ss_pred chhchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999998774 56777888999999999999999999864
|
|
| >PRK08042 formate hydrogenlyase subunit 3; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-53 Score=507.83 Aligned_cols=351 Identities=20% Similarity=0.344 Sum_probs=302.4
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhhhh--hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDIKK--KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~ 310 (1178)
+.+.+|.+|.+|.+++++++..+.+|+..+.+ +.++++.++.++..++.+++.++|+++||++||++++++|.|+..+
T Consensus 54 ~~~~~D~Ls~~fll~i~~v~~~v~lYs~~y~~~~~~~~~~~~~~l~~~~m~gvv~s~dl~~f~v~wElmsL~sy~Li~~~ 133 (593)
T PRK08042 54 YDVQISPLNAIWLITLGLCGLFVSLFNIDWHRHAQVKANGLLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTGNS 133 (593)
T ss_pred eEEEECHHHHHHHHHHHHHHHHHHHHhhHHhcccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45679999999999999999999999944322 3346777888889999999999999999999999999999998763
Q ss_pred CCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCc
Q psy5224 311 GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDA 390 (1178)
Q Consensus 311 ~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~ 390 (1178)
+++.||++++.+|+.++++++.++|..+| ++|+.++.....+.......+.+.++||++|+|++|||.|+||+
T Consensus 134 ------~a~~~y~~~~~~gs~~ll~g~~lly~~~G-s~~f~~l~~~~~~~~~~~~~~~l~liGf~~K~gl~PfH~WLP~a 206 (593)
T PRK08042 134 ------KEGKLWFALGRLGTLLLAIACWLLWQRYG-TLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQA 206 (593)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHhhhcccccchHHHHHHHHHHHHHHHHhHHHhHHHHH
Confidence 23679999999999999999999998888 99988775432111112223455678999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHH
Q psy5224 391 HVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVT 470 (1178)
Q Consensus 391 ~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~ 470 (1178)
|+++|+++++++++++.|+|+|+++|+.. ..+....++..++.++|++|+++|++.|++|+|+||++|||||+|+|+++
T Consensus 207 ~~~AP~~vsalls~v~~Kig~y~lir~~~-~~~~~~~~~~~~l~~lg~iS~i~G~l~Al~Q~dlKRLLAYSSIs~~G~il 285 (593)
T PRK08042 207 HANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIL 285 (593)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999742 22223345667888999999999999999999999999999999999999
Q ss_pred HHHHhcc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhc
Q psy5224 471 LGIFMLT-----------KISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANC 539 (1178)
Q Consensus 471 ~~~~~~~-----------~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~ 539 (1178)
++++.+. ..+..++++|+++|++.|+.+|+.+|.+++++|+|++++++|+.|++|+++.++.++.++++
T Consensus 286 ~glg~~~~~~~~~~~~l~~l~~~gal~hll~Hal~K~lLFl~aG~v~~~~gt~~l~~lgGL~~~~P~~a~~~li~~lsla 365 (593)
T PRK08042 286 LGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMA 365 (593)
T ss_pred HHHHHccchhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCcccHHHhhChHHHHHHHHHHHHHHHHHHH
Confidence 9997642 34778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccchHHHHHHHHHHhhh-----------HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 540 SLPGTSGFIGEFMIILSAVKFNF-----------CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 540 GlPp~~gF~~k~~i~~~~~~~~~-----------~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|+||++||++||+++++.++.+. +.++.+.+++.++..|+.|.+...++|++
T Consensus 366 GlPP~~GF~sK~~I~~~~~~~~~~~~~~~~~~~~l~~~~l~l~s~la~~~~~k~~~~~F~g~p 428 (593)
T PRK08042 366 ALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAP 428 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999987641 22344566778999999999999998865
|
|
| >PRK06591 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=494.93 Aligned_cols=353 Identities=20% Similarity=0.293 Sum_probs=301.8
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh----------hhhhhHHHHHHHHHHHHHHHHHHhhhHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI----------KKKLAEYMSAFLILSGLIIGAFCALDGM 290 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~~l~l~~~~~~~~~~~s~dl~ 290 (1178)
+..+|.+++|+++. +|++|.++.++++++++.+.+++.++ +++.++||.+++++..++++++.|+|++
T Consensus 61 ~~~~w~~~~gi~~~--~D~ls~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ll~~~~~~~~~~s~dl~ 138 (432)
T PRK06591 61 TMGGWTSKIGIEYR--LNSLNQAIIVYLNLVLLFFLVFCHKITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFF 138 (432)
T ss_pred EecCCCCCcceEEE--echHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccchHHHHHHHHHHHHHHHHHHhHHH
Confidence 33578888887765 79999999999999999999998431 2344579999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh--hhhh-hHHHHHH
Q psy5224 291 LFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL--SITK-IEQIWLF 367 (1178)
Q Consensus 291 ~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~--~~~~-~~~~~~~ 367 (1178)
++|++||++++++|.++..++++++.+|++||+++|.+||.++++|+.++|..+| ++|+.++.+. +..+ ....+..
T Consensus 139 ~~~v~~E~~~i~~~~Li~~~~~~~~~~aa~kY~i~~~~gs~~~L~gi~~l~~~~g-t~~~~~l~~~~~~~~~~~~~~~~~ 217 (432)
T PRK06591 139 NLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITG-SLNMTDIAAYLQEHTNSRIITIAI 217 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHhhcccchHHHHHH
Confidence 9999999999999999999988888999999999999999999999998888777 8888776542 1111 1222345
Q ss_pred HHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchh--hHHHHHHHHHHHHHHHHHHHH
Q psy5224 368 ITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD--ASYYFSNLIITLSLISIIYIS 445 (1178)
Q Consensus 368 ~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~--~~~~~~~~l~~~~~~s~~~g~ 445 (1178)
.++++|+++|+|++|||.|+||+|+++|++++++++++++|+|.|+++|+..+.++. ......+++..+|++|+++|+
T Consensus 218 ~l~~~g~~iK~gl~PfH~Wlp~a~~~ap~~~s~~l~~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~~l~~l~~~s~l~ga 297 (432)
T PRK06591 218 GFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIAP 297 (432)
T ss_pred HHHHHHHHHHHHHcccccccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999999999999999999999999998777652 223445778899999999999
Q ss_pred HHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhH
Q psy5224 446 LIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525 (1178)
Q Consensus 446 ~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p 525 (1178)
+.|++|+|+||++|||||+|+||++++. ++..+..++.+|+++|++.|+++|++.|. +++.+++ |
T Consensus 298 ~~al~Q~dlKrllAYSSIs~~G~i~l~~--~~~~~~~~a~~~~~~h~~~k~~LF~~~~~-~~~~~~~------------~ 362 (432)
T PRK06591 298 YFAYQAKNFKNIIIYSCFTQIGYVFLLY--VTENGIIILPSLLLADSINKIALFLIDAY-NESYKRE------------P 362 (432)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccC------------c
Confidence 9999999999999999999999999885 45668889999999999999999999985 4443332 2
Q ss_pred HHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-IGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 526 ~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
.. ..+.++.++++|+||++||++||.+++++.+.+.+ ...++++++++++.|++|+.++.++++..
T Consensus 363 ~~-~~f~i~~lsl~GlPp~~gF~~K~~il~~~~~~~~~~~~~illl~S~l~~~yylri~~~~f~~~~~ 429 (432)
T PRK06591 363 NK-VLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLLFPTKQE 429 (432)
T ss_pred HH-HHHHHHHHHHcCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 22 67889999999999999999999999999988754 45677889999999999999999998753
|
|
| >MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-52 Score=504.76 Aligned_cols=362 Identities=22% Similarity=0.343 Sum_probs=310.6
Q ss_pred chhcccc--cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDYF--NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~~--~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.++. +++..+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++++++.|+|++.+|++||
T Consensus 89 ~~w~~~~~~~~~~~~~~D~ls~~f~~~v~~v~~~v~~ys~~Ym~~~~~~~~F~~llllf~~~ml~lv~s~nl~~l~v~wE 168 (628)
T MTH00208 89 SNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWE 168 (628)
T ss_pred hhhcccCCcceEEEEehHhhHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4688764 355677899999999999999999999999433 23456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh-hhhhhHHHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL-SITKIEQIWLFITFFIAFA 375 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 375 (1178)
.+++++|.|+.+|+++ ++.+|+.||++++.+|+..+++++.+.+..+| ++|+.++... +.++....+...++++|+.
T Consensus 169 ~~~l~sy~LI~~~~~~~~s~~Aa~k~~i~~~iG~~~lLl~i~~~~~~~G-s~~~~~l~~~~~~~~~~~~~~~~~lll~~~ 247 (628)
T MTH00208 169 GVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFN-SWNLNEILSLNNSNSFLINILLFGILLAAA 247 (628)
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 9999999999998754 56799999999999999999999988887777 8888776432 1111222234444567899
Q ss_pred hhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccch
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~ 454 (1178)
.|.|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++. ...+..++.++|++|+++|++.|++|+|+
T Consensus 248 ~Ksa~fPfH~WLPdAm-~aPtpvSallhsst~v~aGvylliR~~-~l~~~-~~~~~~~l~~lg~lT~l~g~l~Al~Q~Dl 324 (628)
T MTH00208 248 GKSAQFGLHPWLPAAM-EGPTPVSALLHSSTMVVAGVFLLIRTS-PLISN-SPWFLSLCLILGSLTALFAASTAISQHDI 324 (628)
T ss_pred HHHHHcccchhHHHHH-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhHhhH
Confidence 9999999999999998 6799999998 5789999999999974 44432 22445678889999999999999999999
Q ss_pred hHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHH
Q psy5224 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 455 krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
||++||||++|+|+++++++.+++ .++++|+++|++.|+.+|+++|.+.++. ++||+++++|+.+++|.++.++.+
T Consensus 325 KriLAYSTIsqlG~ml~~l~~~~~---~~alfhl~~Ha~~KalLFl~aG~ii~~~~~~~di~~~gGL~~~~P~~~~~~~i 401 (628)
T MTH00208 325 KKIIAYSTTSQLGLMVVAIGLNQP---NLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIIL 401 (628)
T ss_pred HHHHHHHHHHHHhHHHHHHHHccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHhcChHhhCHHHHHHHHH
Confidence 999999999999999999998765 3799999999999999999999988876 489999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++|+.+++++.+.+ ++..++..++++++++|++|+.+..++++.
T Consensus 402 ~~lsL~GiPp~sGF~sK~~Il~~~~~~~~~~~~~~l~ll~s~lt~~Y~lRi~~~~f~~~~ 461 (628)
T MTH00208 402 GSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNP 461 (628)
T ss_pred HHHHHHhchhhchHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999988753 345566788999999999999999988764
|
|
| >MTH00020 ND5 NADH dehydrogenase subunit 5; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-52 Score=513.50 Aligned_cols=362 Identities=23% Similarity=0.403 Sum_probs=311.4
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. +++++.+.+|++|..+..++++++.++.+|+.++ +++.++|+.++.++..++++++.++|++++|++||
T Consensus 62 ~~w~~~~~~~~~~~~~~D~ls~~~~~lv~~v~~~v~lys~~ym~~~~~~~~f~~~~~l~~~~m~~lv~s~nl~~~~v~~E 141 (610)
T MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141 (610)
T ss_pred eeeecccccceeEEEeehHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 467764 5567778899999999999999999999999543 22345788899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hhhhHHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAF 374 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 374 (1178)
++++++|.|+..|++ +++.+|+.||++++.+||.++++|+.++|..+| |+|+.++.+.. .+.....+...++++|+
T Consensus 142 ~~~l~sy~LI~~~~~~~~~~~aa~ky~i~~~igs~~lL~gi~~l~~~~G-t~~~~~l~~~~~~~~~~~~~~~~~l~l~g~ 220 (610)
T MTH00020 142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVVSAPSSDITLICLFLFIGA 220 (610)
T ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHHhcccCccHHHHHHHHHHHHH
Confidence 999999999999875 467899999999999999999999999888888 88887764321 11223344455678999
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
++|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. .....++.++|++|+++|++.|++|+|
T Consensus 221 ~~K~a~~PfH~WLP~a~-~aPtpvSall~a~~~v~aGvy~l~R~~-~~~~~~-~~~~~~l~~lg~~t~l~g~~~al~q~D 297 (610)
T MTH00020 221 VGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLLIRSS-PLFEQA-PLALIIVTIVGSLTVFFAATVGLVQND 297 (610)
T ss_pred HHHHhhccChhhHHHHh-CCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999998 6899999965 6779999999999974 444432 233457788999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
+||++||||++|+||++++++.++ ..++++|+++|++.|+.+|+++|.+.++. |++|+++++|+.+++|.++.++.
T Consensus 298 lKrllAySSisqlG~m~~~~~~~~---~~~a~~hl~~Ha~~ka~LFl~~G~vi~~~~~~~~i~~lggl~~~~P~~~~~~~ 374 (610)
T MTH00020 298 LKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFL 374 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCCCccHHHHcChhhhcHHHHHHHH
Confidence 999999999999999999987764 46899999999999999999999888775 78999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNF--CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~--~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||++||++|+.+++++.+.+. ....+..+++++++.|++|++++.++++.
T Consensus 375 i~~lsl~GiPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~lr~~~~~f~~~~ 435 (610)
T MTH00020 375 IGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNT 435 (610)
T ss_pred HHHHHHhCCccccchHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999987653 22345678899999999999999998764
|
|
| >PRK12668 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-52 Score=504.50 Aligned_cols=340 Identities=24% Similarity=0.394 Sum_probs=306.2
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGS 313 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~ 313 (1178)
.+.+|++|.++.++++++++++.+|+.+++++ ++++. .++...++++++.|+|++++|++||++++++|.|+..++++
T Consensus 62 ~~~vD~ls~~f~ll~~~v~~~~~lys~~~~~~-~~~~~-~ll~~~~~lG~~~s~dl~~lfvf~El~sl~s~~LI~~~~~~ 139 (581)
T PRK12668 62 LGRVDKLSRVFGLIFGIMAFIGVIYALHVKDP-GQHVA-ALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTK 139 (581)
T ss_pred eeEEcHHHHHHHHHHHHHHHHHHHHHhHhccc-chHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 36799999999999999999999999654433 23333 67778899999999999999999999999999999888777
Q ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCC
Q psy5224 314 NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVE 393 (1178)
Q Consensus 314 ~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ 393 (1178)
++.++++||++++.+||.++++|+.++|..+| ++|+.++.+.. .....++++|+++|+|++|||.|+||+|++
T Consensus 140 ~s~~aa~kY~i~~~~gs~~lL~gi~lly~~tG-sl~~~~l~~~~------~~~~~lil~G~~~K~g~fPfH~WLPday~~ 212 (581)
T PRK12668 140 AAVRAGFRYLLVHVLGGVLLLAGILLHYAETG-SFAFGAIAGLG------GTAAWLILIGFGVNAAFPPLHAWLPDAYPE 212 (581)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcHHHHHhhH------HHHHHHHHHHHHHHhhhcccHhHhhhhhcc
Confidence 78899999999999999999999999998887 88887764321 125567788999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHH
Q psy5224 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGI 473 (1178)
Q Consensus 394 ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~ 473 (1178)
+|++++++++++++|+|+|+++|+. ++ .+++..+|++|+++|++.|++|+|+||++|||||+|+||+++++
T Consensus 213 a~~~~s~lLs~~~~K~gvy~l~R~~----~~-----~~~l~~lg~~s~i~G~~~Al~q~dlKrlLAYSSIsq~G~il~~i 283 (581)
T PRK12668 213 ATVTGSVFLSAFTTKTAVYALARAF----PG-----TELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGI 283 (581)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHH----cc-----hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999974 21 35677899999999999999999999999999999999999999
Q ss_pred HhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHH
Q psy5224 474 FMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553 (1178)
Q Consensus 474 ~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i 553 (1178)
+.+++.+..++.+|+++|++.|+.+|+++|.+.+++|++++++++|+.|++|.++.++.++.+|++|+||++||++|+++
T Consensus 284 ~~~~~~~~~ga~~h~~~h~l~K~~LFl~aG~i~~~~g~~~l~~l~GL~~~~P~~~~~~~i~~lSl~GiPp~~GF~sK~~i 363 (581)
T PRK12668 284 GIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMI 363 (581)
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHhcChHhhCHHHHHHHHHHHHHHhhccccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-hHHHHHHHHHHHHHHHHH-hhhhhhhhhhhh
Q psy5224 554 ILSAVKFN-FCIGVLTSTALIFSAAYS-LCLSKNIIFVLG 591 (1178)
Q Consensus 554 ~~~~~~~~-~~~~~~~~~~~~ls~~y~-l~~~~~~~~g~~ 591 (1178)
++++.+.+ ++...+..++++.+..|+ +|..+.+++++.
T Consensus 364 ~~~~~~~~~~~~~~~l~l~s~~~~~~~~lki~~~~f~~~~ 403 (581)
T PRK12668 364 ISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFGGD 403 (581)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999876 455667778889999999 999988888764
|
|
| >CHL00025 ndhF NADH dehydrogenase subunit 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-52 Score=512.16 Aligned_cols=362 Identities=21% Similarity=0.380 Sum_probs=311.8
Q ss_pred hhcccc--cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 224 IWIDYF--NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 224 ~w~~~~--~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
+|.+.. .+++.+.+|.+|..+.++++++++++.+|+.++ +++.++|+.++.++..++++++.|+|++++|++||+
T Consensus 74 ~W~~~~~~~~~i~l~~D~ls~~m~~lv~~v~~lv~lys~~ym~~~~~~~rf~~~l~lf~~~ml~lv~S~nl~~l~v~wEl 153 (741)
T CHL00025 74 SWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWEL 153 (741)
T ss_pred eeccCCCcceeEEEeehHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 465442 234456699999999999999999999999433 223457999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--------hhhhHHHHHHHH
Q psy5224 299 TLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--------ITKIEQIWLFIT 369 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--------~~~~~~~~~~~~ 369 (1178)
+++++|.|+++|+++ ++.+|++||++++.+||.++++|+.++|..+| ++|+.++.+.. .+.........+
T Consensus 154 ~~l~sylLI~~~~~~~~a~~Aa~Kyfi~~~vGs~~lLlgi~lly~~~G-t~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll 232 (741)
T CHL00025 154 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITG-SFEFRDLFEIFNNLIYNNEVNLLFATLCAFL 232 (741)
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence 999999999998755 56799999999999999999999999988888 88887664321 011123345667
Q ss_pred HHHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 370 FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448 (1178)
Q Consensus 370 ~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~a 448 (1178)
+++|+++|+|++|||.|+||+| |+|+|+++++ +++++|+|+|++.|+. +++.. ......++.++|++|+++|++.|
T Consensus 233 lliG~~~Ksa~fPfH~WLPdA~-egPtpvSAll~aa~mv~aGvy~l~R~~-pl~~~-~~~~~~~l~~lg~lT~l~gal~A 309 (741)
T CHL00025 233 LFLGPVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLL-PLFIV-IPYIMNLISLIGIITALLGATLA 309 (741)
T ss_pred HHHHHHHHhhhccccccchhhc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998 5799999976 5678899999999974 33322 22345678889999999999999
Q ss_pred HhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------cccchhcccc
Q psy5224 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM---------KTRLISNFGG 519 (1178)
Q Consensus 449 l~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~---------~~~~l~~~~g 519 (1178)
++|+|+||++|||||+|+||++++++.++ ..++++|+++|++.|+.+|+++|.+.+.. +++++++++|
T Consensus 310 l~Q~DiKrlLAYSSIsqlG~mll~lg~~~---~~~alfhli~Ha~~KalLFl~aG~vi~~~~~~~~~~~~~~~~i~~mgG 386 (741)
T CHL00025 310 LAQKDIKRGLAYSTMSQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGG 386 (741)
T ss_pred HHHhhHHHHHHHHHHHhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHhhhHHHHHhccccCCCCcccccHHHhcc
Confidence 99999999999999999999999998764 46899999999999999999999986654 5789999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 520 l~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
+.+++|.++.++.++.+|++|+||++||++|+.+++++.+.+.+...+++++++++++|++|++++.++|+..
T Consensus 387 L~~~~P~~~~~~~i~~LsLaGiPP~~GF~sK~~Il~~~~~~~~~l~~i~ll~s~lt~~Y~lRl~~~~f~g~~r 459 (741)
T CHL00025 387 LRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLR 459 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999999988877777888999999999999999999999764
|
|
| >PRK06590 NADH:ubiquinone oxidoreductase subunit L; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-52 Score=509.99 Aligned_cols=361 Identities=23% Similarity=0.384 Sum_probs=311.9
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. +++++.+.+|++|..+..++++++.++.+|+.++ +++.++|+.+++++..++++++.|+|++++|++||
T Consensus 66 ~~w~~~~~~~~~~~~~~D~ls~~~~~lv~~i~~~v~lys~~ym~~~~~~~~f~~~l~lf~~~m~~lv~s~nl~~l~v~~E 145 (624)
T PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145 (624)
T ss_pred EeeeecCCcceeEEEEecHhHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456553 4566778899999999999999999999999433 33456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh-----hhhhhHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL-----SITKIEQIWLFITFF 371 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~-----~~~~~~~~~~~~~~~ 371 (1178)
++++++|.++..|++ +++.+|++||++++.+||.++++|+.++|..+| ++|+.++.+. ..+.....+...+++
T Consensus 146 ~~~l~sy~LI~~~~~~~~~~~aa~ky~i~~~vGs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~ll~ 224 (624)
T PRK06590 146 GVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFG-SLNYDEVFAAAPQFFGLGWSALTLICLLLF 224 (624)
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHhhhhhccccCchHHHHHHHHHH
Confidence 999999999998774 457899999999999999999999999888777 8888766432 111222334455678
Q ss_pred HHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 372 IAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMV 450 (1178)
Q Consensus 372 ~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~ 450 (1178)
+|+.+|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++. ......++.++|++|+++|++.|++
T Consensus 225 ~g~~~K~a~~PfH~WLP~a~-~aPtpvSall~s~~~v~aGvy~l~R~~-~l~~~-~~~~~~~l~~lg~~t~l~g~~~al~ 301 (624)
T PRK06590 225 IGAMGKSAQFPLHTWLPDAM-EGPTPVSALIHAATMVTAGVYLVARMS-PLFEL-SPEALLFVAIVGAVTALFAAFIGLV 301 (624)
T ss_pred HHHHHHHhhccchhhccccc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999998 6899999966 5679999999999974 44432 2235677888999999999999999
Q ss_pred ccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhcccchhhhhHHHHH
Q psy5224 451 QIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK-TRLISNFGGIINVIPHFSV 529 (1178)
Q Consensus 451 q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~-~~~l~~~~gl~~~~p~~~~ 529 (1178)
|+|+||++||||++|+|++++++.. .+..++++|+++|++.|+.+|+++|.+.++.+ +|++++++|+.+++|.++.
T Consensus 302 q~dlKrilAySSisqlG~m~~~l~~---~~~~~a~~hl~~Ha~~Ka~LFl~aG~ii~~~~~~~~i~~~ggl~~~~P~~~~ 378 (624)
T PRK06590 302 QTDIKRVLAYSTMSQLGYMFLALGV---GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYA 378 (624)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHhcCchhhcHHHHH
Confidence 9999999999999999999999944 36678999999999999999999998888776 9999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy5224 530 FFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVL 590 (1178)
Q Consensus 530 ~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~ 590 (1178)
++.++.+|++|+||++||++|+.+++++.+.+. +...+..+++++++.|++|+.++.++++
T Consensus 379 ~~~i~~lsl~G~Pp~~GF~sK~~il~~~~~~~~~~~~~~~~~~s~lt~~y~~r~~~~~f~g~ 440 (624)
T PRK06590 379 TFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGK 440 (624)
T ss_pred HHHHHHHHHhhCcchhhHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999988764 3466778899999999999999999876
|
|
| >PRK05777 NADH:ubiquinone oxidoreductase subunit N; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-51 Score=494.07 Aligned_cols=357 Identities=24% Similarity=0.383 Sum_probs=312.4
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhh-hhh-hhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDI-KKK-LAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~ 310 (1178)
..+.+|+++..+..++.+++.++.+++.++ +++ .++||.++++...|+++++.|+|++++|++||++++++|.+++.+
T Consensus 67 ~~~~~D~~s~~~~~~~~~~~~~~~l~s~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~~ 146 (476)
T PRK05777 67 GMLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146 (476)
T ss_pred ceeEechHHHHHHHHHHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346789999999999999999999998543 222 458999999999999999999999999999999999999999988
Q ss_pred CCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh--h--hhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 311 GGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL--S--ITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 311 ~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~--~--~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
+++ ++.|+++||++++.+||.++++|+.++|..+| ++|+.++.+. + .++........+++.|+++|+|++|||.
T Consensus 147 ~~~~~s~ea~~kYfi~~~~~s~~lL~g~~~ly~~tG-s~~~~~~~~~~~~~~~~~~~~~~~~~li~~gl~~K~g~~PfH~ 225 (476)
T PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATG-SLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHM 225 (476)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcCHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 765 67899999999999999999999999998888 8888776532 1 1111122345677889999999999999
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHHH-HHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 386 WLPDAHVEAPTEGSVILAAIMLKLGCYG-LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~ls~~~~k~g~~~-l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
|+||+|+++|+|++++++++ .|++.+. +.|+....+++....+...+.+++++|+++|++.|++|+|+||++|||||+
T Consensus 226 Wlpdvy~~ap~~v~a~ls~~-~K~~~~~~l~r~~~~~~~~~~~~~~~~l~~~~~ls~~~g~~~al~Q~~~KrlLAySSI~ 304 (476)
T PRK05777 226 WTPDVYEGAPTPVTAFLATA-PKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304 (476)
T ss_pred cCcccccCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999987 5555555 589865545443345677888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHHHHHhhcCCCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp 543 (1178)
|+||+++++..++..+..++++|+++|+++|.++|.+++.++++. +++++++++|+.+++|..+..+.++.+|++|+||
T Consensus 305 ~~G~il~~l~~~~~~~~~~~~~y~~~y~~~~~~lF~~~~~~~~~~~~~~~l~~l~gl~~~~p~~~~~~~i~~lsl~GiPP 384 (476)
T PRK05777 305 HAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384 (476)
T ss_pred HHHHHHHHHHhccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCHHHHhChhhhChHHHHHHHHHHHHHhccCc
Confidence 999999999999888999999999999999999999999988764 5889999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 544 TSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 544 ~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.||++|++++.++.+.+ ++..+++.+++++++.||+|..+++++++.
T Consensus 385 ~~GF~~K~~i~~~~~~~~~~~l~~~~~l~s~is~~yylri~~~~f~~~~ 433 (476)
T PRK05777 385 TAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEP 433 (476)
T ss_pred hhhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999876 456677888999999999999999999865
|
|
| >TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase, chain L | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-52 Score=508.74 Aligned_cols=362 Identities=25% Similarity=0.402 Sum_probs=313.0
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. +++++.+.+|++|..+..++++++.++.+|+.++ +++.++|+.+++++..++++++.|+|++++|++||
T Consensus 65 ~~w~~~~~~~~~~~~~~D~ls~~~~~lv~~i~~~v~lys~~ym~~~~~~~rf~~~~~lf~~~m~~lv~s~nl~~l~v~~E 144 (617)
T TIGR01974 65 FPWISVGGFQVDFGLRLDQLSLTMLIVVTGVSLLVHIYSIGYMAHDEGYSRFFAYLSLFTFSMLMLVLADNFLQLFFGWE 144 (617)
T ss_pred eeeeecCCcceeEEEeehHHHHHHHHHHHHHHHHHHHHHHHHhHhCcCccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 356543 4566778899999999999999999999999433 23455788899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh--hhhhHHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS--ITKIEQIWLFITFFIAF 374 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 374 (1178)
++++++|.++.+|++ +++.+|++||++++.+||.++++|+..+|..+| ++|+.++.+.. .+.....+...++++|+
T Consensus 145 ~~~l~sy~Li~~~~~~~~~~~a~~ky~i~~~vgs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~~~~~~~~~~~~ll~~g~ 223 (617)
T TIGR01974 145 GVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFG-TLNFQEVFALAPGADFSALTLICLLLFIGA 223 (617)
T ss_pred HHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 999999999998775 457899999999999999999999999888777 88887664321 11112334456678899
Q ss_pred HhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5224 375 AIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453 (1178)
Q Consensus 375 ~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d 453 (1178)
.+|+|++|||.|+||+| |+|+|+++++ +++++|+|+|++.|+. +.+.. ......++.++|++|+++|++.|++|+|
T Consensus 224 ~~K~a~fPfH~WLP~a~-~aPtpvsall~a~t~v~aGvy~l~R~~-~l~~~-~~~~~~~l~~lg~lt~l~g~~~al~q~d 300 (617)
T TIGR01974 224 MGKSAQLPLHTWLPDAM-EGPTPVSALIHAATMVTAGVYLVARTS-PLFEL-SPTALYLVTIIGAITALFAATVALVQND 300 (617)
T ss_pred HHHhhhccchhhhhhhc-cCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998 6899999965 6789999999999984 44422 2234567888999999999999999999
Q ss_pred hhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhcccchhhhhHHHHHHHH
Q psy5224 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK-TRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 454 ~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~-~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
+||++||||++|+|+++++++.+ +..++++|+++|++.|+.+|+++|.+.++.+ ++++++++|+.+++|.++.++.
T Consensus 301 lKrllAySsisqlG~m~~~l~~~---~~~~a~~hl~~Ha~~ka~LFl~aG~ii~~~~~~~~i~~~ggl~~~~P~~~~~~~ 377 (617)
T TIGR01974 301 IKRILAYSTCSQLGYMFLALGVG---AYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFL 377 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHhcCchhhhHHHHHHHH
Confidence 99999999999999999999876 6678999999999999999999998888765 9999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||++||++|+.+++++.+.+ .+...+..+++++++.|++|+.++.++++.
T Consensus 378 i~~lsl~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~lr~~~~~f~g~~ 438 (617)
T TIGR01974 378 IGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMTFHGKK 438 (617)
T ss_pred HHHHHHhhchhhchHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999874 556667788999999999999999998864
|
This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. |
| >MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=502.37 Aligned_cols=360 Identities=25% Similarity=0.400 Sum_probs=312.5
Q ss_pred cchhcc--cccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 222 KKIWID--YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 222 ~~~w~~--~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
..+|.+ .+++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++++++.|+|++++|++|
T Consensus 60 ~~~~~~~~~~~~~~~~~~D~ls~~f~~~~~~v~~~v~~ys~~ym~~~~~~~~f~~ll~lf~~~m~~lv~s~nl~~l~v~w 139 (597)
T MTH00211 60 NWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGW 139 (597)
T ss_pred EEeeeecCCcCeEEEEeehhhHHHHHHHHHHHHHHHHHHhHHHhcCCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 346764 35677888999999999999999999999998432 3345689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (1178)
|.+++++|.|+.+|+++ ++.+|++||++++.+|+.++++|+.+++..+| ++|+.++.+...+ ......++++|+.
T Consensus 140 E~~~l~sy~LI~~~~~~~~~~~A~~k~~i~~~iG~~~ll~gi~~l~~~~g-s~~~~~~~~~~~~---~~~~~~lll~~~~ 215 (597)
T MTH00211 140 EGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLN-SWEISQLFILNLD---LTLFLLGLLLAAM 215 (597)
T ss_pred HHHHHHheeeeeEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcHHHHHHhccc---HHHHHHHHHHHHH
Confidence 99999999999987754 56799999999999999999999998887777 8888766432111 1334556788999
Q ss_pred hhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccch
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~ 454 (1178)
+|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++. ...+..++.++|++|+++|++.|++|+|+
T Consensus 216 ~Ksa~~PfH~WLP~A~-~aPtpvSallhs~t~v~aGvylliR~~-~~~~~-~~~~~~~l~~lg~lt~l~g~l~al~q~Dl 292 (597)
T MTH00211 216 GKSAQFGFHPWLPSAM-EGPTPVSALLHSSTMVVAGVFLLIRLS-PLFQN-NQLILGAVLLLGALTMLFGALCALTQNDI 292 (597)
T ss_pred HhhhhccCCCCCchhc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999998 7899999998 6789999999999975 44432 23456778899999999999999999999
Q ss_pred hHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccchhcccchhhhhHHHHHHHHH
Q psy5224 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 455 krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~-~~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
||++||||++|+|+++++++.+++ .++++|+++|++.|+.+|+++|.+.++ .|+||+++++|+.+++|.++.++.+
T Consensus 293 KrllAySSisqlG~m~~~l~~~~~---~~a~~hl~~Ha~~Ka~LFl~~G~ii~~~~~~~~i~~~gGl~~~~P~~~~~~~i 369 (597)
T MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQP---QLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFL 369 (597)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHhCCccccchHHHHHHHH
Confidence 999999999999999999988765 579999999999999999999977554 5899999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++|+.+++++.+.+ .+...+..+++++++.|++|+.++.+++++
T Consensus 370 ~~lsl~GiPp~~GF~sK~~il~~~~~~~~~~~~~~~~~l~s~lt~~Y~lrl~~~~~~~~~ 429 (597)
T MTH00211 370 GSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYP 429 (597)
T ss_pred HHHHHhcCccccchhHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998764 455567788999999999999999998875
|
|
| >MTH00004 ND5 NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=500.26 Aligned_cols=360 Identities=26% Similarity=0.391 Sum_probs=308.8
Q ss_pred cchhc--ccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 222 KKIWI--DYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 222 ~~~w~--~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
..+|. +.+++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++++++.|+|++++|++|
T Consensus 65 ~~~~~~~~~~~~~~~l~~D~lS~~f~~~v~~v~~~v~~ys~~Ym~~~~~~~~f~~ll~lf~~sm~~lv~s~nl~~l~v~w 144 (602)
T MTH00004 65 NWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGW 144 (602)
T ss_pred EEeeeecCCCCeEEEeeehHhHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHHchHHHHHHHH
Confidence 34574 456677788999999999999999999999998433 2345689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (1178)
|.+++++|+|+.+|++ +++.+|++||++++.+|+.++++|+..+|..+| ++|+.++.+... .+.+....++++..
T Consensus 145 E~~~l~sy~LI~~~~~~~~s~~Aa~ky~i~~~igs~~lL~gi~~l~~~~g-t~~~~~l~~~~~---~~~~~~~~lll~~~ 220 (602)
T MTH00004 145 EGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLN-TWEIQQLFSPTQ---TPTLPLLGLILAAT 220 (602)
T ss_pred HHHHHHheeeeeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchHHHHHHhcc---hHHHHHHHHHHHHH
Confidence 9999999999998765 467899999999999999999999998888777 888877643211 12223333455666
Q ss_pred hhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccch
Q psy5224 376 IKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454 (1178)
Q Consensus 376 ~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~ 454 (1178)
.|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. ..+..++.++|++|+++|++.|++|+|+
T Consensus 221 ~Ksa~fPfH~WLP~A~-~aPtpvSallhs~~~v~aGvylliR~~-~~~~~~-~~~~~~l~~lg~lT~l~g~l~Al~q~di 297 (602)
T MTH00004 221 GKSAQFGLHPWLPAAM-EGPTPVSALLHSSTMVVAGIFLLIRTH-PLLQNN-QTALTICLCLGALTTLFAATCALTQNDI 297 (602)
T ss_pred HhcCCCCCCCCCCCee-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHhHhhH
Confidence 6999999999999997 6899999998 7789999999999974 333322 2345677889999999999999999999
Q ss_pred hHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHH
Q psy5224 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFII 533 (1178)
Q Consensus 455 krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i 533 (1178)
||++||||++|+||++++++.+++ .++++|+++|++.|+.+|+++|.+.++. |++|+++++|+.+++|.++.++.+
T Consensus 298 KrlLAySSisqlG~m~~~i~~~~~---~~al~hll~Ha~~KalLFl~aG~ii~~~~~~~di~~~ggl~~~~P~~~~~~~i 374 (602)
T MTH00004 298 KKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTI 374 (602)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHhHHHHHcCCCeeHHHhCCchhhcHHHHHHHHH
Confidence 999999999999999999988755 4799999999999999999999887775 789999999999999999999999
Q ss_pred HHHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 534 FSLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 534 ~~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+.+|++|+||++||++|+.+++++.+.+ .+...+..+++++++.|++|+.++.++|+.
T Consensus 375 ~~lsl~GiPp~~GF~sK~~Il~~~~~~~~~~~~~~l~ll~s~lt~~Y~lr~~~~~f~g~~ 434 (602)
T MTH00004 375 GNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFP 434 (602)
T ss_pred HHHHHhCCCccCCchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998764 445556788999999999999999998874
|
|
| >MTH00165 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=500.59 Aligned_cols=354 Identities=21% Similarity=0.333 Sum_probs=307.2
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
.++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.++++...++++++.|+|++++|++||.+++++|.
T Consensus 44 ~~~~~~l~~D~ls~~f~~~v~~i~~~v~~ys~~ym~~~~~~~~f~~l~~lf~~sm~~lv~s~nl~~l~v~wE~~~l~sy~ 123 (573)
T MTH00165 44 SSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYC 123 (573)
T ss_pred CCeEEEeehHHhHHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3556677899999999999999999999999533 3345689999999999999999999999999999999999999
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 306 IIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 306 Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
++.+++++++.+|+.||++++.+||.++++|+..+ ..+| ++|+.++.+...++....+...++++|+++|+|++|||.
T Consensus 124 LI~~~~~~~s~~aa~ky~i~~~vgs~~lL~gi~~l-~~~g-s~~~~~~~~~~~~~~~~~~~~~ll~~~~~~K~a~~PfH~ 201 (573)
T MTH00165 124 LVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWM-MNFG-SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSS 201 (573)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhC-CchHHHHHHHhccccHHHHHHHHHHHHHHHHHhhccchH
Confidence 99998888888999999999999999999999887 5556 777765432111112233445567789999999999999
Q ss_pred cccCccCCCChHHHHH-HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 386 WLPDAHVEAPTEGSVI-LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~-ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
|+||+| ++|+|++++ ++++++|+|+|+++|+. +..+. .....++.++|++|+++|++.|++|+|+||++||||++
T Consensus 202 WLP~a~-~aPtpvSall~ss~~v~agvy~liR~~-~~~~~--~~~~~~l~~lg~lT~l~g~~~al~q~dlKrllAySSis 277 (573)
T MTH00165 202 WLPAAM-AAPTPVSALVHSSTLVTAGVYLLIRFN-NLLFS--SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLS 277 (573)
T ss_pred hhcccc-CCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhH--HHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 999999 799999997 58899999999999985 33332 23466788899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccchhcccchhhhhHHHHHHHHHHHHhhcCCCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~-~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp 543 (1178)
|+||++++++.++. .++++|+++|++.|+++|+++|.+.++ .|++|+++++|+.+++|.++.++.++.+|++|+||
T Consensus 278 qlG~m~~~i~~~~~---~~a~~~l~~Ha~~ka~LFl~~G~ii~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsL~GlPp 354 (573)
T MTH00165 278 QLGLMMSILSLGFP---KLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPF 354 (573)
T ss_pred HHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHhhChhhhhHHHHHHHHHHHHHHhhChh
Confidence 99999999988754 579999999999999999999998776 79999999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 544 TSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 544 ~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++||++|+.+++++.+.+ .+..++..+++++++.|++|+.++.++|+.
T Consensus 355 ~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~lr~~~~~f~g~~ 404 (573)
T MTH00165 355 LSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDF 404 (573)
T ss_pred hhhhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999988654 345566788999999999999999988774
|
|
| >MTH00210 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-51 Score=501.93 Aligned_cols=362 Identities=23% Similarity=0.382 Sum_probs=308.7
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. +++++.+.+|++|..+..++++++.++.+|+.++ +++.++|+.++.++..++.+++.++|++++|++||
T Consensus 62 ~~w~~~~~~~~~~~~~~D~ls~~~~~lv~~i~~~v~lys~~ym~~~~~~~~f~~~l~lf~~~m~~lv~s~nl~~l~v~wE 141 (616)
T MTH00210 62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141 (616)
T ss_pred eeecccCCcCeeEEEehhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 456654 4556677899999999999999999999999543 23446888899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh---hhhhHHHHHHHHHHHH
Q psy5224 298 ATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS---ITKIEQIWLFITFFIA 373 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~~~~~g 373 (1178)
.+++++|.|+.+|++ +++.+|++||++++.+||.++++|+.++|..+| ++|+.++.+.. .++....+...++++|
T Consensus 142 ~~~l~sy~LI~~~~~~~~~~~aa~k~~i~~~vGs~~lLlgi~~l~~~~g-t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 220 (616)
T MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFG-TLEFSTISSLLVTNINKESLTIICLLLFIG 220 (616)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHHhhccccccHHHHHHHHHHHH
Confidence 999999999999875 467899999999999999999999998887777 88887654321 1122233445567889
Q ss_pred HHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 374 FAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 374 ~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
++.|+|++|||.|+||+| ++|+|+++++ +++++|+|+|+++|+. +.++... ....++..+|++|+++|++.|++|+
T Consensus 221 ~~~Ksa~fPfH~WLP~a~-~aPtpvSall~s~~~v~aGvyll~R~~-~l~~~~~-~~~~~l~~lg~lT~l~g~~~al~q~ 297 (616)
T MTH00210 221 AVGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLIIRSG-PLFEGSP-LALTIVTILGALTAFFAATVGVVQN 297 (616)
T ss_pred HHHHHhhccchhhcchhc-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhccH-HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999998 6899999965 7789999999999974 4443322 2346778899999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFF 531 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~ 531 (1178)
|+||++||||++|+||++++++.++ ..++++|+++|++.|+.+|+++|.+.++. +++|+++++|+.+++|.++.++
T Consensus 298 DlKrilAySSisqlG~m~~~l~~~~---~~~al~hli~Ha~~kalLFl~aG~~i~~~~~~~~i~~lgGl~~~~P~~~~~~ 374 (616)
T MTH00210 298 DLKKVIAYSTCSQLGYMVMVCGISN---YSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMI 374 (616)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHhcCcccccHHHHHHH
Confidence 9999999999999999999998764 46899999999999999999999888776 5899999999999999999999
Q ss_pred HHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HH-HHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 532 IIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CI-GVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 532 ~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~-~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.++.+|++|+||++||++|+.+++++.+.+. .. ..+..+++++++.|++|+.++.++++.
T Consensus 375 ~i~~lsl~GlPp~sGF~sK~~Il~~~~~~~~~~~~~~l~~~~s~lt~~Y~~r~~~~~f~g~~ 436 (616)
T MTH00210 375 LIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNT 436 (616)
T ss_pred HHHHHHHhCCCccccHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999887653 22 235678899999999999999998764
|
|
| >COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=462.34 Aligned_cols=309 Identities=42% Similarity=0.775 Sum_probs=286.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+++.+.+++|+...|+++|+.++++|.+++..|+++++.|+++||++++.++|.+++.|+.++|+.+||+++.++.+..+
T Consensus 112 G~~~~~sa~~l~~lfiglEl~Sl~~Y~L~a~~r~~~~s~EaalKYfvlGalsS~~~l~G~al~Y~~tGsl~l~~i~~~~~ 191 (475)
T COG1007 112 GMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYGIALVYGATGSLSLSGIAAYLN 191 (475)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHhhhc
Confidence 66778899999999999999999999999999999988899999999999999999999999999999999999887655
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.+.......++.++++.|+++|++.+|||+|.||+|+++|++++.++++++|++++..+.|++....++....|+.++.
T Consensus 192 -~~~~~~~l~~g~vfii~gl~FKlsavPFH~W~PDVYeGApt~v~afls~a~Kia~f~vl~Ri~~~~~~~~~~~~~~i~~ 270 (475)
T COG1007 192 -GGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFA 270 (475)
T ss_pred -cCccchHHHHHHHHHHHHHHHHHccCcccccCcccccCCCccHHHHHHhhHHHHHHHHHHHHHHHhcCccchhHHHHHH
Confidence 3333334667889999999999999999999999999999999999999999999999999998887777788999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
+++++|+++|++.|+.|+|+||+||||||+|+||+++++...+.. +..+.++|.+.|.+++.+.|.++...+
T Consensus 271 iiAv~SM~~GN~~Al~Q~nvKRlLAYSSIah~Gy~L~gl~a~~~~--------g~~a~~~y~l~Y~~~~lgaf~~v~~~~ 342 (475)
T COG1007 271 IIAVASMLVGNFAALSQTNVKRLLAYSSIAHMGYLLVGLAAVTVG--------GYAAVLFYLLAYAFMSLGAFGVVALLS 342 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcHHHHHHHhHHHHHHHHHHHHHHcccc--------chhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999876542 448899999999999999998888888
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++..+ ..++++++|+.+++|..+..+.+.++|++|+||+.|||+|++++.+.++.+.||+..+.+++|.++++ |.|++
T Consensus 343 ~~~~~-~~~~~~~~GL~~~~P~~A~~~~i~m~SLaGIPP~~GF~gK~~vf~~av~~~~~~Laii~vl~S~isa~YYlRvv 421 (475)
T COG1007 343 SKEGG-AESISDLAGLSKRHPLLAALLTILMLSLAGIPPLAGFWGKFYVFLAAVQAGLWWLAVIAVLNSAISAYYYLRVV 421 (475)
T ss_pred cCCCC-ccchhhhccccccCcHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 77643 67789999999999999999999999999999999999999999999999999999999999999999 89998
|
|
| >MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-51 Score=479.61 Aligned_cols=342 Identities=24% Similarity=0.353 Sum_probs=298.4
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~ 310 (1178)
.+..|..+..+..+..+.+....+.+.++ +++.++|+.++++...|+++++.|+|++.+|++||++++++|.+++.+
T Consensus 61 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~l~~~~g~l~l~~s~dl~~l~v~~El~sl~~y~Li~~~ 140 (460)
T MTH00199 61 LLLTNSWIIISKIIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALK 140 (460)
T ss_pred ceeecHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35679999988888877777777666322 234568999999999999999999999999999999999999999988
Q ss_pred CC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccC
Q psy5224 311 GG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389 (1178)
Q Consensus 311 ~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~ 389 (1178)
++ +++.||++||+++|.+||.++++|+.++|..+| ++|+.++.+. .+ ......++++|+++|+|++|||.|+||
T Consensus 141 ~~~~~s~eAa~KYfl~~~~~S~~lL~gi~lly~~tG-s~~~~~l~~~-~~---~~~~~~lil~g~~~Kl~~~PfH~WlPd 215 (460)
T MTH00199 141 RDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG-ETSIQGINSI-LT---GDVGKILITISLLFKLSAAPFHMWAPD 215 (460)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHH-HH---HHHHHHHHHHHHHHHHhhccccccHHH
Confidence 75 466899999999999999999999999998877 7787766432 11 123445678899999999999999999
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHH
Q psy5224 390 AHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV 469 (1178)
Q Consensus 390 ~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i 469 (1178)
+|+++|+++++++++ ..|+|.|++++-. .| ..+.+.+++++|+++|++.|++|+|+||++|||||+|+||+
T Consensus 216 vy~~apt~~sa~Ls~-~~Ki~~~~il~~l---~~-----~~~~l~~l~~lS~i~G~l~al~Q~diKRlLAYSSIsh~G~i 286 (460)
T MTH00199 216 VYEGAPTITTALLAT-VPKIGVFSILVQI---GP-----VTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFI 286 (460)
T ss_pred HHccCCHHHHHHHHH-HHHHHHHHHHHHH---hh-----HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhHHHHHHH
Confidence 999999999999985 6999999887532 22 13567889999999999999999999999999999999999
Q ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccch
Q psy5224 470 TLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIG 549 (1178)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~ 549 (1178)
++++..++..+..++++|+++|++++.++|.+++.++++ ++++++++|+.+++|..+..+.++.+|++|+||+.||++
T Consensus 287 llgl~~~~~~g~~~~l~y~i~y~l~~~~~F~~i~~l~~~--~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~ 364 (460)
T MTH00199 287 LFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLT--KGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLS 364 (460)
T ss_pred HHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--hhhHHHHhChhhhCHHHHHHHHHHHHHHhCcCccccHHH
Confidence 999999988899999999999999999999999877554 567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 550 EFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 550 k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
|++++.++.+.+ ++.++++++++++++.||+|+.+++++++.
T Consensus 365 K~~il~~~~~~~~~~l~~i~~l~Svis~~Yylri~~~~~~~~~ 407 (460)
T MTH00199 365 KWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIYFQAD 407 (460)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999876 456778889999999999999999999863
|
|
| >MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-51 Score=498.40 Aligned_cols=363 Identities=22% Similarity=0.343 Sum_probs=306.9
Q ss_pred chhccccc--chhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDYFN--IYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~~~--i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.++.+ .++.+.+|.+|..+..++++++.++.+|+.++ +++.++|+.++.++..++.+++.++|++++|++||
T Consensus 62 ~~w~~~~~~~~~i~l~iD~ls~~~~~lv~~v~~~v~lyS~~Ym~~~~~~~rf~~~l~lf~~~m~~lv~s~nl~~l~v~wE 141 (669)
T MTH00032 62 YKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWE 141 (669)
T ss_pred eeccccCCcceEEEEehhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45766433 34456799999999999999999999999433 23446888888999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh-----h----------hh
Q psy5224 298 ATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI-----T----------KI 361 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~-----~----------~~ 361 (1178)
++++++|.|+..|+++ ++.+|++||++++.+||.++++|+.++|..+| ++|+.++.+... + +.
T Consensus 142 ~~~l~sy~LI~~~~~~~~s~~Aa~Kyfi~~~vGs~~lL~gi~lly~~~G-sl~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 220 (669)
T MTH00032 142 GVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIG-SLDFLTFNGGSVGSGIMDRGYYGGGAYESP 220 (669)
T ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHHhhcchhhccccccccccccc
Confidence 9999999999998765 56799999999999999999999999998888 888876643110 0 01
Q ss_pred --HHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHH
Q psy5224 362 --EQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL 438 (1178)
Q Consensus 362 --~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~ 438 (1178)
.......++++|+++|++++|||.|+||+| ++|+|+++++ +++++|+|+|+++|+. +.++.. ..+..++.++|+
T Consensus 221 ~~~~~~~~~lllig~~~Ksa~fPfH~WLPdA~-~aPtpvSAllha~~~v~aGvyll~R~~-~~~~~~-~~~~~~l~~lg~ 297 (669)
T MTH00032 221 LAPFAIIGILLLIGCIGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMIRSF-PLFEKA-PLTLLIITIFGA 297 (669)
T ss_pred hhHHHHHHHHHHHHHHHHHhHccchhHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhcc-HHHHHHHHHHHH
Confidence 112233456789999999999999999999 5899999976 6678999999999974 444332 233467888999
Q ss_pred HHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccchhc
Q psy5224 439 ISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM--KTRLISN 516 (1178)
Q Consensus 439 ~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~--~~~~l~~ 516 (1178)
+|+++|++.|++|+|+||++||||++|+||++++++.. .+..++++|+++|++.|+.+|+++|.+.++. +++++++
T Consensus 298 lT~l~gal~Al~Q~DlKriLAYSSISqlG~mll~lgl~--~~~~~al~hll~Ha~~Ka~LFl~aG~ii~~~~~~~~di~~ 375 (669)
T MTH00032 298 LTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIE--GSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRK 375 (669)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhHHH
Confidence 99999999999999999999999999999999999773 2457899999999999999999999998886 5899999
Q ss_pred ccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh-----------------------------------
Q psy5224 517 FGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN----------------------------------- 561 (1178)
Q Consensus 517 ~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~----------------------------------- 561 (1178)
++|+.+++|.++.++.++.+|++|+||++||++|+++++++.+.+
T Consensus 376 lgGL~~~~P~~~~~f~i~~LSL~GlPp~sGF~sK~~Ile~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (669)
T MTH00032 376 MGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGIPFGSSLLKIQGDIGIKKDDRGSIGGPEGYPS 455 (669)
T ss_pred hcChHhHhHHHHHHHHHHHHHHHhCcccccHHHHHHHHHHHHhccccccccchhhhhhcccccccccccccccccccccC
Confidence 999999999999999999999999999999999999999987543
Q ss_pred ---hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 562 ---FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 562 ---~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+...+..++..+++.|+.|+....+++++
T Consensus 456 ~~~~~~~~~~~~~~~lT~~Ys~Rl~~~~f~~~~ 488 (669)
T MTH00032 456 RGSAFAFWLGTVAALLTAFYSIRLVYITFIISP 488 (669)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 234456678899999999999999888764
|
|
| >MTH00108 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=492.68 Aligned_cols=360 Identities=24% Similarity=0.403 Sum_probs=307.1
Q ss_pred chhcc--cccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWID--YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~--~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+ ..++++.+.+|++|..+..++.+++..+.+|+.++ +++.++|+.+++++..++++++.|+|++.+|++||
T Consensus 66 ~~~~~~~~~~~~~~~~~D~lS~~f~~~v~~i~~~v~~ys~~ym~~~~~~~~f~~l~llf~~~m~~lv~s~nl~~l~v~wE 145 (602)
T MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145 (602)
T ss_pred ehhhccCCCCeeEEEeehHhHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 35653 35566778899999999999999999999998432 34567899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHh
Q psy5224 298 ATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI 376 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (1178)
.+++++|.|+..|+ ++++.+|++||++++.+|+..+++|+..++..+| ++|+.++.....+ ........+++++..
T Consensus 146 ~~~l~sy~Li~~~~~~~~~~~aa~ky~l~~~igs~~ll~~i~~l~~~~g-s~~~~~l~~~~~~--~~~~~~~~lll~~~~ 222 (602)
T MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLN-SWDLQQIFMLNPN--NSNLPLMGLLLAATG 222 (602)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cccHHHHHHhccc--chHHHHHHHHHHHHH
Confidence 99999999999865 5567899999999999999999999998887777 8888665422111 122233334566677
Q ss_pred hcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 377 KIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 377 K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. ..+..++.++|++|+++|++.|++|+|+|
T Consensus 223 Ksa~fPfH~WLP~a~-~aPtpvSallhs~~~v~agvylliR~~-~~~~~~-~~~~~~l~~lg~lT~l~g~l~Al~Q~dlK 299 (602)
T MTH00108 223 KSAQFGLHPWLPSAM-EGPTPVSALLHSSTMVVAGVFLLIRFH-PLMENN-KTIQTLTLCLGAITTLFTAICALTQNDIK 299 (602)
T ss_pred HhhcccCCCCchhHH-cCCcHHHHHHHHHHHHHHHHHHHHHHH-HHhccc-HHHHHHHHHHHHHHHHHHHHHHHhHhhHH
Confidence 999999999999998 6799999998 7789999999999974 333322 24556788899999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIF 534 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i~ 534 (1178)
|++||||++|+|+++++++.+++ .++++|+++|++.|+.+|+++|.+.++. +++|+++++|+.+++|.++.++.++
T Consensus 300 rilAySSisqlG~ml~~l~~g~~---~~a~~hl~~Ha~~ka~LFl~~G~ii~~~~~~~di~~lgGl~~~~P~~~~~~~i~ 376 (602)
T MTH00108 300 KIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIG 376 (602)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHhcChHhhhHHHHHHHHHH
Confidence 99999999999999999988765 3799999999999999999999887775 5799999999999999999999999
Q ss_pred HHhhcCCCCCcccchHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 535 SLANCSLPGTSGFIGEFMIILSAVKF--NFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 535 ~ls~~GlPp~~gF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+|++|+||++||++|+.+++++.+. +.+...+.++++.+++.|++|+.++.+++++
T Consensus 377 ~lsL~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~ll~s~lt~~Y~lrl~~~~~~~~~ 435 (602)
T MTH00108 377 SLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQP 435 (602)
T ss_pred HHHHhcCccccchHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999998764 3445566778899999999999999998764
|
|
| >PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-51 Score=463.19 Aligned_cols=328 Identities=18% Similarity=0.168 Sum_probs=276.7
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
|.+..+.+|.++.+|+++..+++.++.+|+.++.++.+.-.. .++..++++++.++|++++|++||++++++|+++..
T Consensus 13 ~~~l~~~~~~ls~lfali~~lv~~~~slysi~~~~~~~~~~~--~lf~~g~~~vv~a~Dlf~ffVf~ElmsL~syiLV~~ 90 (506)
T PRK06588 13 NFELMFDFHPQNQLIALAFLIVTAILNLYTISQNRKLECLIG--SLYCLSSIICVFAADFISMIISLEFMTIFACIIIFC 90 (506)
T ss_pred CEEEEEEEchHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 345566899999999999999999999999554443332222 333567788889999999999999999999999865
Q ss_pred cCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccC
Q psy5224 310 WGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389 (1178)
Q Consensus 310 ~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~ 389 (1178)
+ +++.||++||++++.+||.++|+|+.++|..+| ++|+.++.+...+. .....++++||++|+|++|||.|+||
T Consensus 91 ~--~~~~eAa~KYlI~~~lGS~llLlGi~lLY~~tG-sl~f~~l~~~~~~~---~l~~vlilvGf~iKaglfPfH~WLPd 164 (506)
T PRK06588 91 D--QLKIKPARQYFLTHLFSSGLILIGMTLLIQTTS-NTAFTSLTESVNNF---ELPAIFILAGCLINASAIFVNGWVVN 164 (506)
T ss_pred C--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcCHHHHHHhhcch---HHHHHHHHHHHHHHHHHhhccccchh
Confidence 3 467899999999999999999999999998887 89988775432111 12334578899999999999999999
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHH
Q psy5224 390 AHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV 469 (1178)
Q Consensus 390 ~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i 469 (1178)
+|++||++++++++++++|+|+|+++|+.. . .+.+.++|++|+++|++.|++|+|+||++|||||+|+|++
T Consensus 165 AY~~APs~vSalLsgv~~KvgiygLiRlf~----~-----~~lL~~LGiiSiI~G~l~AL~Q~DlKRLLAYSSIsq~GyI 235 (506)
T PRK06588 165 CYPIASSSGIVYLISFTTKVTLIIILKLFS----G-----LEILKFFGISMIIYGLVFSLIEKNLKRLICYLTVSQLGFI 235 (506)
T ss_pred hhCcCCHHHHHHHHHHHHHHHHHHHHHHHh----c-----hHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999742 1 1467889999999999999999999999999999999999
Q ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhh--hhHHHHHHHHHHHHhhcCCCCCccc
Q psy5224 470 TLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN--VIPHFSVFFIIFSLANCSLPGTSGF 547 (1178)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~--~~p~~~~~~~i~~ls~~GlPp~~gF 547 (1178)
++|++.+++.+..+++.|+++|++.++++|+.++.++++. ++++++|+.+ ++|.++..+.++++|++|+||++||
T Consensus 236 LlGIg~gt~~~~~~al~y~l~Hil~~alffl~~~~l~~~~---~l~~l~GL~~~~~~Pila~~f~I~~LSlaGIPPl~GF 312 (506)
T PRK06588 236 LAAISINSPNIAYLITSFIFIHILYNGLFALYFAYIEDEY---DIKNYQDLQNTQINFILLIGFVISILIYTSILPISSS 312 (506)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc---ChHHHHhhhccCcChHHHHHHHHHHHHHhcCCchhhH
Confidence 9999999999999999999999999998888888776654 4566667764 5999999999999999999999999
Q ss_pred chHHHHHHHHHHhhhH-HHHHHHHHHHHHHH
Q psy5224 548 IGEFMIILSAVKFNFC-IGVLTSTALIFSAA 577 (1178)
Q Consensus 548 ~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~ 577 (1178)
++||++++++.+.+.. ...++.++++++..
T Consensus 313 f~K~~l~~~~~~~~~~~~~~i~~~t~~~~~~ 343 (506)
T PRK06588 313 YIKDEIANILNENNVMLFSKIATCTVLFGLL 343 (506)
T ss_pred HHHHHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 9999999999999853 33445555555544
|
|
| >MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-51 Score=490.55 Aligned_cols=352 Identities=22% Similarity=0.335 Sum_probs=303.0
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
+++++.+.+|++|..+..++.+++.++.+|+.++ +++.++|+.+++++..++++++.|+|++++|++||.+++++|.
T Consensus 42 ~~~~~~~~~D~ls~~f~~~v~~i~~~v~~ys~~ym~~~~~~~~f~~l~llf~~~m~~lv~s~nl~~l~v~wE~~~l~sy~ 121 (564)
T MTH00209 42 MSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYL 121 (564)
T ss_pred cCeEEEeeehHhHHHHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4556778899999999999999999999999433 3345689999999999999999999999999999999999999
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 306 IIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 306 Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
++.+++++++.+|+.||++++.+||.++++|+..++ ..| ++|+.+.. .+.........++++|+.+|+|++|||.
T Consensus 122 Li~~~~~~~s~~a~~ky~l~~~vgs~~lLlgi~~l~-~~g-s~~~~~~~---~~~~~~~~~~~ll~~g~~~Ksa~fPfH~ 196 (564)
T MTH00209 122 LVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWML-MHG-NWNIFYLN---FNSNLGSVISVLIVLAAMTKSAQIPFSA 196 (564)
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhC-CchHHHHh---ccchHHHHHHHHHHHHHHHHHHHccchh
Confidence 999988888889999999999999999999988765 445 66664432 1112233344556789999999999999
Q ss_pred cccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 386 WLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
|+||+| ++|+|+++++ +++++|+|+|+++|+.....+ ...+.+++..+|++|+++|++.|++|+|+||++||||++
T Consensus 197 WLP~a~-~aPtpvSallhss~~v~agvylliR~~~~~~~--~~~~~~~l~~lg~lT~l~g~l~Al~q~dlKriLAySSIs 273 (564)
T MTH00209 197 WLPAAM-AAPTPVSALVHSSTLVTAGVYLLIRFFPSLFS--SPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLS 273 (564)
T ss_pred hhhhhc-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 999998 7999999995 889999999999998643332 223456788899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccchhcccchhhhhHHHHHHHHHHHHhhcCCCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~-~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp 543 (1178)
|+||++++++.++. .++++|+++|++.|+.+|+++|.+.++ .|++|+++++|+.+++|.++.++.++.+|++|+||
T Consensus 274 qlG~m~~~l~~~~~---~~alfhll~ha~~k~~LFl~~G~ii~~~~~~~di~~lgGl~~~~P~~~~~~~i~~lsL~GlPp 350 (564)
T MTH00209 274 QLGLMMCSLGLNQP---ELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPF 350 (564)
T ss_pred HHHHHHHHHHHccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHhcChhhhhHHHHHHHHHHHHHHhcchh
Confidence 99999999988754 579999999999999999999976555 56899999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhhh-H-HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 544 TSGFIGEFMIILSAVKFNF-C-IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 544 ~~gF~~k~~i~~~~~~~~~-~-~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++||++|+.+++++.+.+. + ..++..+++++++.|++|+.++.++++.
T Consensus 351 ~~GF~sK~~Il~~~~~~~~~~~~~~l~~l~s~lt~~Y~lrl~~~~f~g~~ 400 (564)
T MTH00209 351 LAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPN 400 (564)
T ss_pred hchhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999987753 3 2345677999999999999999998864
|
|
| >MTH00151 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=489.96 Aligned_cols=350 Identities=23% Similarity=0.306 Sum_probs=302.5
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~L 306 (1178)
++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++.+++.|+|++++|++||.+++++|.|
T Consensus 45 ~~~~~~~~D~lS~~f~~~v~~i~~~v~~ys~~ym~~~~~~~~f~~l~~lf~~sm~~lv~s~nl~~l~v~wE~~~l~sy~L 124 (565)
T MTH00151 45 SFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFAL 124 (565)
T ss_pred CeEEEeehhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 455667899999999999999999999999433 23356899999999999999999999999999999999999999
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 307 IGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 307 i~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
+.+++++++.+|++||++++.+|+.++++|+.+++ .+| ++|+.++... ....+...++++|+.+|+|++|||.|
T Consensus 125 i~~~~~~~s~~a~~kyfi~~~vgs~~lL~gi~~l~-~~g-s~~~~~~~~~----~~~~~~~~ll~~g~~~Ksa~~PfH~W 198 (565)
T MTH00151 125 VIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLV-LLG-HWSILSMWDF----KLSGWLGLLLVLAAMTKSAQIPFSSW 198 (565)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-CccHHHHhhh----hhHHHHHHHHHHHHHHHhhhccchhh
Confidence 99988888889999999999999999999998876 455 7777554321 11222334456799999999999999
Q ss_pred ccCccCCCChHHHHH-HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhH
Q psy5224 387 LPDAHVEAPTEGSVI-LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~-ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~ 465 (1178)
+||+| ++|+|++++ ++++++|+|+|+++|+... .+. ...+..++..+|++|+++|++.|++|+|+||++||||++|
T Consensus 199 LP~a~-~aPtpvSall~ss~~v~agvylLiR~~~~-~~~-~~~~~~~l~~lg~lT~l~g~l~Al~Q~dlKrlLAySSisq 275 (565)
T MTH00151 199 LPAAM-AAPTPVSALVHSSTLVTAGVFLLIRFFPF-LSS-SSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQ 275 (565)
T ss_pred hhhhc-CCCcHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-hHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 99999 799999997 5889999999999998532 222 2234567888999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCC
Q psy5224 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN-QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544 (1178)
Q Consensus 466 ~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~-~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~ 544 (1178)
+||++++++.++. .++++|+++|++.|+.+|+++|.+.+ +.|++|+++++|+.+++|.++.++.++.+|++|+||+
T Consensus 276 lG~m~~~l~~g~~---~~al~hl~~Ha~~k~lLFl~~G~ii~~~~~~~di~~lggl~~~~P~~~~~~~i~~lsL~GlPp~ 352 (565)
T MTH00151 276 LGVMMFSLGLGMP---SLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFL 352 (565)
T ss_pred HHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHhcChhhhhHHHHHHHHHHHHHHhccccc
Confidence 9999999988754 47899999999999999999998765 4689999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 545 SGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 545 ~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+||++|+.+++++.+.+ ....++..+++++++.|++|+.++.++++.
T Consensus 353 ~GF~sK~~Il~~~~~~~~~~~~~~l~~l~s~lt~~Y~lr~~~~~~~~~~ 401 (565)
T MTH00151 353 SGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401 (565)
T ss_pred chhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999998654 344456678999999999999999988764
|
|
| >PRK06589 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=484.32 Aligned_cols=360 Identities=26% Similarity=0.378 Sum_probs=302.1
Q ss_pred hhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh-----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q psy5224 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEA 298 (1178)
Q Consensus 224 ~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~ 298 (1178)
.|. ++++. +.+|++|..+.+++++++.++.+|+.++ +++.++||.++.+...+..+...|+|++++|++||+
T Consensus 71 ~~~-~~gi~--l~~D~ls~~~~~~~~~v~~~~~lys~~y~~~~~~~~~~~~~~~~~l~l~~~~~~~~s~dl~~l~v~~El 147 (489)
T PRK06589 71 DFG-NYSIG--LHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYEL 147 (489)
T ss_pred eec-ceeEE--EEecHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 455 45654 5699999999999999999999999433 122245666655555555555689999999999999
Q ss_pred HHHHHHHHHHhcCCCcchHHHHHHH-HHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhh
Q psy5224 299 TLIPIFIIIGTWGGSNRSYAAIKFF-LYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377 (1178)
Q Consensus 299 ~~i~~~~Li~~~~~~~~~~aa~ky~-i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K 377 (1178)
+++++|.|+..++++++.|+++||+ +.+..|+.+++.|+..+|..+| ++|+.+......+ ......++++++..|
T Consensus 148 ~~l~~~~Li~~~~~~~~~~aa~kY~~i~~~~s~~~lL~gi~~~y~~~g-t~~~~~~~~~~~~---~~~~~~ll~~~~~~K 223 (489)
T PRK06589 148 LTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTG-NLDFVSGGLFSKN---QSIILLLMFIYGIAK 223 (489)
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHhhhhhhccc---HHHHHHHHHHHHHHH
Confidence 9999999999988888899999999 4555666778899988888777 8888664322111 122334566788889
Q ss_pred cCCCcccccccCccCCCChHHHHHHHH-HHHHHHHHHHHHHHhhhchhhH--H--HHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5224 378 IPIWPMHTWLPDAHVEAPTEGSVILAA-IMLKLGCYGLLRFSLPIFPDAS--Y--YFSNLIITLSLISIIYISLIAMVQI 452 (1178)
Q Consensus 378 ~~~~PfH~Wlp~~~~~ap~~~s~~ls~-~~~k~g~~~l~r~~~~~~~~~~--~--~~~~~l~~~~~~s~~~g~~~al~q~ 452 (1178)
+|++|||.|+|+ |.++|+|+++++++ +++|+|+|++.|+....++... . ...+++..+|++|+++|++.|++|+
T Consensus 224 ~glfPfH~WlP~-~~~ap~~vsall~~~~~~k~g~y~l~Ri~~~~~~~~~~~~~~~~~~~l~~l~~ls~~~g~~~al~q~ 302 (489)
T PRK06589 224 TAIFPVHSWLPA-AMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTD 302 (489)
T ss_pred Hhhccchhhccc-cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999995 56799999999999 7999999999998765554211 1 1235677899999999999999999
Q ss_pred chhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHH
Q psy5224 453 DIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532 (1178)
Q Consensus 453 d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~ 532 (1178)
|+||++|||||+|+||+++++...++.+..++++|+++|++.|+.+|+++|.+++++|++++++++|+.+++|.++..+.
T Consensus 303 dlKrlLAYSSIsq~G~i~l~l~~~~~~~~~~al~~~~~h~l~k~~LFl~~G~i~~~~g~~~i~~l~gl~~~~p~~~~~f~ 382 (489)
T PRK06589 303 NIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIIS 382 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHccChHhhHHHHHHHHH
Confidence 99999999999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccchHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNF-----CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 533 i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-----~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++.+|++|+||+.||++||++++++.+.+. +...+.++++++++.|++|+.++.+++++
T Consensus 383 i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~~~~~~ll~s~ls~~y~~ri~~~~f~~~~ 446 (489)
T PRK06589 383 ISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPSL 446 (489)
T ss_pred HHHHHHcCCCccccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998764 23345678999999999999999998765
|
|
| >MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-50 Score=492.09 Aligned_cols=361 Identities=24% Similarity=0.360 Sum_probs=306.5
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. +++++.+.+|++|..+..++.+++..+.+++.++ +++.++|+.+++++..++.+++.|+|++++|++||
T Consensus 70 ~~w~~~~~~~~~~~~~~D~lS~~~~~lv~~vs~~v~~ys~~ym~~~~~~~~f~~llllf~~~m~~lv~s~nl~~~~v~wE 149 (611)
T MTH00137 70 WNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWE 149 (611)
T ss_pred eeeeeccCcceEEEEeehhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 467653 4567778899999999999999999988888432 33456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHh
Q psy5224 298 ATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI 376 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (1178)
.+++++|.|++.|+ ++++.+|+.||++++.+|+..+++|+.++|..+| ++|+.++.+...... .......+++++..
T Consensus 150 ~~~l~sy~LI~~~~~~~~~~~Aa~k~~i~~~igs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~~~-~~~~~~~l~l~~~~ 227 (611)
T MTH00137 150 GVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLN-SWEIQQIFALSKDFD-LTLPLLGLILAATG 227 (611)
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHHhhcccc-hHHHHHHHHHHHHH
Confidence 99999999999876 4567899999999999999999999998887777 888866543211111 11233345667888
Q ss_pred hcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 377 KIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 377 K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. ..+..++.++|++|+++|++.|++|+|+|
T Consensus 228 K~a~fPfH~WLP~a~-eaPtpvSall~s~~~v~aGvylliR~~-~~~~~~-~~~~~~l~~lg~lt~l~g~l~al~q~dlK 304 (611)
T MTH00137 228 KSAQFGLHPWLPSAM-EGPTPVSALLHSSTMVVAGIFLLIRLS-PLMENN-QTALTTCLCLGALTTLFTATCALTQNDIK 304 (611)
T ss_pred HHhhccCcccchhhc-cCCchHHHHHHHHHHHHHHHHhhhhhH-Hhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999998 6799999998 7889999999999974 333322 22345677899999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIF 534 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i~ 534 (1178)
|++||||++|+||++++++.++. .++++|+++|++.|+.+|+++|.+.++. +++|+++++|+.+++|.++.++.++
T Consensus 305 rllAySSisqlG~m~~~l~~~~~---~~a~~hll~Ha~~ka~lFl~~g~ii~~~~~~~~i~~l~Gl~~~~P~~~~~~~i~ 381 (611)
T MTH00137 305 KIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIG 381 (611)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHhCCcccccHHHHHHHHHH
Confidence 99999999999999999988754 4699999999999999999999987765 5789999999999999999999999
Q ss_pred HHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 535 SLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 535 ~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+|++|+||++||++|+.++++..+.+ .+...+.++++++++.|++|+.++.++++.
T Consensus 382 ~lsl~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~lR~~~~~~~g~~ 440 (611)
T MTH00137 382 SLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHP 440 (611)
T ss_pred HHHHhcccccccchHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999987653 344556678899999999999999998874
|
|
| >MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=494.04 Aligned_cols=359 Identities=25% Similarity=0.399 Sum_probs=306.4
Q ss_pred chhccc--ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy5224 223 KIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE 297 (1178)
Q Consensus 223 ~~w~~~--~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E 297 (1178)
.+|.+. .++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++++++.|+|++++|++||
T Consensus 64 ~~~~~~~~~~~~~~~~~D~ls~~~~~~v~~i~~~v~~ys~~ym~~~~~~~~f~~l~ll~~~~m~~l~~s~nl~~l~v~~E 143 (598)
T MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143 (598)
T ss_pred eeeeeccCcCeEEEEEechhHHHHHHHHHHHHHHHHHHhHHhhccCCchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 456652 4556778899999999999999999999998432 34456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHh
Q psy5224 298 ATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI 376 (1178)
Q Consensus 298 ~~~i~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (1178)
.+++++|.|+..++ ++++.+|+.||++++.+|+.++++|+.++|..+| ++|+.++.+...+ .......+++|+..
T Consensus 144 ~~~l~sy~Li~~~~~~~~~~~aa~ky~l~~~vgs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~---~~~~~~~l~l~~~~ 219 (598)
T MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTN-SWELQQIFLLNDN---STLPLLGLILAAAG 219 (598)
T ss_pred HHHHHheeeeeeeCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CccHHHHHHhccc---hHHHHHHHHHHHHH
Confidence 99999999999866 4467899999999999999999999999988777 8888765432111 12223334568888
Q ss_pred hcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q psy5224 377 KIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455 (1178)
Q Consensus 377 K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~k 455 (1178)
|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. ..+..++.++|++|+++|++.|++|+|+|
T Consensus 220 K~a~~PfH~WLP~a~-~aPtpvSallhs~~~v~agvy~liR~~-~~~~~~-~~~~~~l~~lg~lt~l~g~l~Al~q~dlK 296 (598)
T MTH00066 220 KSAQFGLHPWLPAAM-EGPTPVSALLHSSTMVVAGIFLLIRFH-PLLENN-QTALTICLCLGALTTLFTAACALTQNDIK 296 (598)
T ss_pred HhhhccCCcchHhHh-cCCcHHHHHHHHHHHHHHHHHHHHhhH-HhHhhh-HHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 999999999999998 6799999998 7789999999999974 333322 22345677899999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhcccchhhhhHHHHHHHHHH
Q psy5224 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIF 534 (1178)
Q Consensus 456 rllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-~~~~l~~~~gl~~~~p~~~~~~~i~ 534 (1178)
|++|||||+|+||++++++.+++ .++++|+++|++.|+.+|+++|.+.++. +++|+++++|+.+++|.++.++.++
T Consensus 297 rlLAySSIsqlG~m~~~l~~~~~---~~a~~hl~~Ha~~k~~lFl~~G~i~~~~~~~~di~~~gGl~~~~P~~~~~~~i~ 373 (598)
T MTH00066 297 KIVAFSTSSQLGLMMVTIGLNQP---QLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIG 373 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHhcCChhhhChHHHHHHHHH
Confidence 99999999999999999988755 4799999999999999999999997766 4799999999999999999999999
Q ss_pred HHhhcCCCCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 535 SLANCSLPGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 535 ~ls~~GlPp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+|++|+||++||++|+.+++++.+.+ .+..++..+++++++.|++|+.+..++++.
T Consensus 374 ~lsl~GiPp~~GF~sK~~il~~~~~~~~~~~~~~i~ll~s~lt~~Y~~ri~~~~~~~~~ 432 (598)
T MTH00066 374 SLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFP 432 (598)
T ss_pred HHHHhCCCccccchHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999988765 344556688999999999999988887764
|
|
| >MTH00207 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-50 Score=482.77 Aligned_cols=350 Identities=22% Similarity=0.379 Sum_probs=300.0
Q ss_pred cchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5224 230 NIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306 (1178)
Q Consensus 230 ~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~L 306 (1178)
++++.+.+|.+|..+..++.+++..+.+|+.++ +++.++|+.+++++..++.+++.|+|++++|++||.+++++|.|
T Consensus 48 ~~~~~~~~D~~s~~f~~~v~~is~~v~~ys~~Ym~~~~~~~~f~~l~llf~~~m~~lv~s~nl~~l~l~wE~~~l~sy~L 127 (572)
T MTH00207 48 PINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFIL 127 (572)
T ss_pred CeEEEeehHHhHHHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 344556789999999999999999999999433 33456899999999999999999999999999999999999999
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 307 IGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 307 i~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
+..++++++.+|++||++++.+||.++++|+.+.+. .+ ++++.+..+... ......++++|+.+|+|++|||.|
T Consensus 128 i~~~~~~~s~~A~~ky~l~~~iGs~~lL~gi~~~~~-~~-~~~~~~~~~~~~----~~~~~lll~i~~~~Ksa~fPfH~W 201 (572)
T MTH00207 128 VIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLN-QG-HWSITNMWQTDM----NNYIALSIMIAAMTKSAQMPFSSW 201 (572)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc-chhHHHHHHhhh----HHHHHHHHHHHHHHHhccccCccc
Confidence 999888888999999999999999999999987643 34 565544322111 113344567888999999999999
Q ss_pred ccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhH
Q psy5224 387 LPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~ 465 (1178)
+||+| ++|+|+++++ +++++|+|+|+++|+. +.+.. .....+++.++|++|+++|++.|++|+|+||++||||++|
T Consensus 202 LPda~-~aPtpvSall~s~tlv~aGvylliR~~-~~~~~-~~~~~~~l~~lg~lT~l~g~l~Al~q~dlKrilAySSisq 278 (572)
T MTH00207 202 LPAAM-AAPTPVSALVHSSTLVTAGVFLLIRFY-PFLSS-TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQ 278 (572)
T ss_pred cchhc-CCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99998 7999999985 7789999999999984 33221 2234567888999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCC
Q psy5224 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN-QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544 (1178)
Q Consensus 466 ~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~-~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~ 544 (1178)
+|+++++++.+++ .++++|+++|++.|+++|+++|.+.+ +.|++|+++++|+.+++|.++.++.++.+|++|+||+
T Consensus 279 lG~m~~~l~~g~~---~~al~hll~Ha~~KalLFl~aG~ii~~~~~~~di~~~ggl~~~~P~~~~~~~i~~lsL~GiPp~ 355 (572)
T MTH00207 279 LGVMMASLGLGMP---KLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFL 355 (572)
T ss_pred HHHHHHHHHHccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHhcChHhhhHHHHHHHHHHHHHHHhCcch
Confidence 9999999998765 57999999999999999999998765 5789999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 545 SGFIGEFMIILSAVKF--NFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 545 ~gF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+||++|+.+++++... +....++..+++++++.|++|+.++.++++.
T Consensus 356 sGF~sK~~Il~~~~~~~~~~~~~~i~ll~s~lt~~Y~lRl~~~~f~~~~ 404 (572)
T MTH00207 356 SGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN 404 (572)
T ss_pred hhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999998643 3445567788999999999999999998864
|
|
| >MTH00094 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=459.57 Aligned_cols=339 Identities=27% Similarity=0.442 Sum_probs=291.8
Q ss_pred cchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCC-Ccc
Q psy5224 237 IDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNR 315 (1178)
Q Consensus 237 ~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~-~~~ 315 (1178)
.|..+.++..++.++.......+.+. +. ...+...+...+.+.+.++|++.+|+++|++++|.+.++..||+ +||
T Consensus 36 ~d~~~~~~~~l~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~f~s~dl~~fyv~~E~~lip~~~LI~~~g~~~er 111 (403)
T MTH00094 36 FDSFVFVLLIFMMVFILGLVLLSEKN--FN--LLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEK 111 (403)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhh--hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 59999888888887776656555321 11 22233445677889999999999999999999999999998885 688
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCC
Q psy5224 316 SYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395 (1178)
Q Consensus 316 ~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap 395 (1178)
.+|+.|+++++.+||.++++++...+.. . +++..++.. ..+ ...++++|+++|+|++|||.|+||+|+|+|
T Consensus 112 ~~A~~y~~iyt~~~Sl~lL~~i~~~~~~-~-~~~~~~~~~-----~~~--~~~~~~~~f~vK~~l~PfH~WlP~a~~eap 182 (403)
T MTH00094 112 INSSYYLLFYAAFFSFPFLFVYLKNFFF-F-SLCYFDFFL-----SWE--MFFILSLSFMMKFPVYFLHLWLPKAHVEAP 182 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHH-----HHH--HHHHHHHHHHHHHhHHHHHhcchHhhccCC
Confidence 8999999999999999999987755432 2 344333321 111 245677899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHh
Q psy5224 396 TEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFM 475 (1178)
Q Consensus 396 ~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~ 475 (1178)
++++++++|+++|+|.|+++|+..... ....+.+..++++|+++|++.|++|+|+||++|||||+|+|++++++..
T Consensus 183 ~~~s~lLa~vl~Klg~~gl~r~~~~~~----~~~~~~~~~l~~~s~i~g~~~~l~Q~dlKrllAySSvshmg~i~~~l~~ 258 (403)
T MTH00094 183 TTASMLLAGLLLKLGTAGFLRILGSLN----FVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVY 258 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999764331 1223456788999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHH
Q psy5224 476 LTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555 (1178)
Q Consensus 476 ~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~ 555 (1178)
++..+..++++|+++|++.|+++|+.+|.++++.|+|++++++|+.+++|.++..+.++.++++|+||+.||++|+.++.
T Consensus 259 ~~~~~~~ga~~~~i~Hgl~s~~lF~~~g~~~~~~~sr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~~e~~i~~ 338 (403)
T MTH00094 259 MSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIIS 338 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHhcChhhhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 556 SAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
++.+.+++..++..+++++++.|++|+++++++|+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~s~~Y~l~~~~~~~~g~~~ 375 (403)
T MTH00094 339 NSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKF 375 (403)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999988888889999999999999999999998754
|
|
| >PRK06459 hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=477.10 Aligned_cols=309 Identities=21% Similarity=0.326 Sum_probs=272.9
Q ss_pred cchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcch
Q psy5224 237 IDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS 316 (1178)
Q Consensus 237 ~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~ 316 (1178)
.|.+|.+|.+++.+++..+.+|+.+++++.++|+.+++++..|+++++.++|++.+|++||++++++|+|+..+ +++.
T Consensus 42 ~~~ls~~f~~l~~~v~~~~~lys~~y~~~~~~~~~l~~l~~~gm~~v~~s~dl~~f~v~wEl~~l~sy~LI~~~--~~~~ 119 (585)
T PRK06459 42 YNGVLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNK 119 (585)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcC--CccH
Confidence 58899999999999999999999655445567888999999999999999999999999999999999999876 3456
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc--cccCccCCC
Q psy5224 317 YAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT--WLPDAHVEA 394 (1178)
Q Consensus 317 ~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~--Wlp~~~~~a 394 (1178)
+|+.||++++.+|+.+++.|+..+|..+| ++|+.++.. ...+.++++||++|+|++|||. |+||+|+++
T Consensus 120 ~Aa~~yli~~~~gs~~lL~gi~~ly~~tG-s~~f~~l~~--------~~~~~l~liGf~~K~g~fPfH~~~WLP~a~~~A 190 (585)
T PRK06459 120 RPAFVFMAFGELSTVLILAGFAWAFIISG-TTNFSYLPS--------PVPLILASFGFIIKMGMMPFLVSEWLPIAHGNA 190 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHh--------HHHHHHHHHHHHHHHhhccccccCccchhhccC
Confidence 89999999999999999999999998887 888876532 1234567799999999999999 999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHH
Q psy5224 395 PTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIF 474 (1178)
Q Consensus 395 p~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~ 474 (1178)
|+++++++|++++|+|+|+++|+.....+....++..++.++|++|+++|++.|++|+|+||++|||||+|+|+++++++
T Consensus 191 Ps~vSallSgv~~k~gvy~liR~~~~~~~~~~~~~~~~l~~lg~lS~i~G~l~Al~Q~dlKrlLAYSSIs~~G~illglg 270 (585)
T PRK06459 191 PSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALG 270 (585)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654443222256788899999999999999999999999999999999999999876
Q ss_pred hcc--h--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCC
Q psy5224 475 MLT--K--------ISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544 (1178)
Q Consensus 475 ~~~--~--------~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~ 544 (1178)
.+. . .+..++++|+++|++.|+++|+++|.+++++|+|+.++ ++|..+.++.++.+|++|+||+
T Consensus 271 ~~~~~~~~~~~l~~~~l~gal~~~l~Hal~K~~LFl~aG~i~~~~~t~~~~~------~~p~~~~~~~i~~lsl~GlPP~ 344 (585)
T PRK06459 271 LYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKI------RNRWIELGLTLLASSLSGLLPN 344 (585)
T ss_pred HhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhh------hCcHHHHHHHHHHHHHHhhhhh
Confidence 531 1 26779999999999999999999999999999987654 3488899999999999999999
Q ss_pred cccchHHHHHHHHHHhhh
Q psy5224 545 SGFIGEFMIILSAVKFNF 562 (1178)
Q Consensus 545 ~gF~~k~~i~~~~~~~~~ 562 (1178)
+||++||++++++++.+.
T Consensus 345 ~GF~sk~li~~~~~~~~~ 362 (585)
T PRK06459 345 IGGVASWLLLESLFMFAY 362 (585)
T ss_pred hhHHHHHHHHHHHHHhCc
Confidence 999999999999998763
|
|
| >MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=469.34 Aligned_cols=342 Identities=19% Similarity=0.312 Sum_probs=290.8
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGT 309 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~ 309 (1178)
+.+.+|.+|..+..++.+++..+.+++.++ +++.++|+.++++...++.+++.|+|++++|++||.+++++|.|+..
T Consensus 39 ~~~~~d~ls~~f~~iv~~vs~~v~lys~~Ym~~~~~~~~f~~llllf~~sm~~lv~s~nl~~l~v~wE~~~l~sy~LI~~ 118 (527)
T MTH00095 39 LKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLF 118 (527)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 445689999999999999999999999433 23345899999999999999999999999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHhHHHHHHHHHHH-HHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccccccc
Q psy5224 310 WGGSNRSYAAIKFFLYTLMGSLLMLISMIYL-YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLP 388 (1178)
Q Consensus 310 ~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp 388 (1178)
++++++.+||.||++++.+|+.+++.++... +...+ +++.... ......++++|...|+|++|||.|+|
T Consensus 119 ~~~~~s~~aa~k~~l~~~vGd~~lL~~~~~~~~~~~~-~~~~~~~---------~~~~~~llll~~~~Ksa~~PFH~WLP 188 (527)
T MTH00095 119 YNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYY-FFSFSFF---------SSSMILMLLLTSFTKSAQFPFSSWLP 188 (527)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHH---------HHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9988888999999999999999999865432 22233 3332211 12234456677789999999999999
Q ss_pred CccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHH
Q psy5224 389 DAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467 (1178)
Q Consensus 389 ~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G 467 (1178)
|+| |+|||+++++ +++++|+|+|++.|+..+..+ ..+..++.++|++|+++|++.|++|+|+||++||||++|+|
T Consensus 189 dA~-~aPTpVSALlhs~tlv~aGvyll~R~~~~~~~---~~~~~ll~~lg~lT~l~g~l~Al~Q~DlKrlLAYSTIsqlG 264 (527)
T MTH00095 189 KAM-SAPTPVSSLVHSSTLVTAGLILLMNFSYLILN---MNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMG 264 (527)
T ss_pred HHh-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 999 6999999975 778999999999998644332 23567888999999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhcccchhhhhHH-HHHHHHHHHHhhcCCCCCc
Q psy5224 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN-QMKTRLISNFGGIINVIPH-FSVFFIIFSLANCSLPGTS 545 (1178)
Q Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~-~~~~~~l~~~~gl~~~~p~-~~~~~~i~~ls~~GlPp~~ 545 (1178)
+++++++.+.. .++++|+++|++.|+++|+++|.+.+ +.|++|+++++|+. ++|. .+..+.++.+|++|+||++
T Consensus 265 ~m~l~l~~g~~---~~al~hli~Hal~Ka~LFl~aG~ii~~~~~~~di~~~~gl~-~~p~~~~~~~~i~~lsL~GiPp~s 340 (527)
T MTH00095 265 FSMLTFGSGLS---FVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNG-NLPMFIQLQLLVTLFCLCGLMFTS 340 (527)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcCHHHHcChh-cchHHHHHHHHHHHHHHHhhhhhh
Confidence 99999987533 36999999999999999999998755 56889999999999 5555 5788899999999999999
Q ss_pred ccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 546 GFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 546 gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
||++|+.+++++.+.+ .+..++..+++++++.|++|+.+.+++++..
T Consensus 341 GF~SK~~Il~~~~~~~~~~~l~~i~~~s~~lT~~Y~~Rl~~~~f~~~~~ 389 (527)
T MTH00095 341 GMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSK 389 (527)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999865 4556677889999999999999999988764
|
|
| >PRK07234 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-49 Score=470.28 Aligned_cols=326 Identities=23% Similarity=0.398 Sum_probs=284.1
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCC
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG 312 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~ 312 (1178)
+.+++|++|..+.+++++++.++.+|+.+ +++.+.|+.+++++.+++.+++.|+|++++|++||++++++|.++..+++
T Consensus 61 ~~l~vD~ls~~~~ll~~~v~~~~~l~s~~-~~~~~~~~~~ll~l~~~~~~~~~s~dl~~~~v~~El~~i~~~~Li~~~~~ 139 (470)
T PRK07234 61 VTLRADALSGYFILTNALVTLAVIFYCWE-SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRT 139 (470)
T ss_pred EEEEechhhHHHHHHHHHHHHHHHHHHcc-cCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999999863 22334455555666677777888999999999999999999999998877
Q ss_pred CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccC
Q psy5224 313 SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHV 392 (1178)
Q Consensus 313 ~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~ 392 (1178)
+++.++++||++++.+||.++++|+..+|..+| ++|+.++.+.+ .....++++|+++|+|++|||.|+||+|+
T Consensus 140 ~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~g-s~~~~~l~~~~------~~~~~l~~~g~~~K~glfPfH~WlP~a~~ 212 (470)
T PRK07234 140 DRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANG-TFAFSGLATAD------PEAFALIALGLLVKGGIFVSGLWLPLTHS 212 (470)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccHHHHHhhh------HHHHHHHHHHHHHHHhhcchHHHHHHHhc
Confidence 778899999999999999999999999988777 88887765421 14556788899999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHH
Q psy5224 393 EAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472 (1178)
Q Consensus 393 ~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~ 472 (1178)
++|++++++++++++|+|+|+++|+.... ++ ..+++..+|++|+++|++.|++|+|+||++||||++|+||++++
T Consensus 213 ~a~~~~s~lls~~~~K~g~y~l~R~~~~~-~~----~~~~l~~lg~~t~~~g~~~al~q~dlKrlLAySSIsq~G~il~~ 287 (470)
T PRK07234 213 EAEPPVSALLSGVVVKAGVFPLVRCALDV-PG----LDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA 287 (470)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hh----HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999975432 22 24678889999999999999999999999999999999999998
Q ss_pred HHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHH
Q psy5224 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFM 552 (1178)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~ 552 (1178)
+..++++|+ +|++.|+.+|+++|.++++++++++++++|+.+++|++ ++.++++|+||++||++|++
T Consensus 288 -------~~~~~~~~l-~H~l~k~~LFl~~g~i~~~~~~~~~~~~~gl~~~~pl~-----~~~lsl~GlPp~~GF~sK~l 354 (470)
T PRK07234 288 -------PLVGGLYAL-AHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVL 354 (470)
T ss_pred -------HHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeHHHhcCHHHHHHHH-----HHHHHHHhhhhhchHHHHHH
Confidence 346788888 99999999999999999999999999999999999975 56788899999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy5224 553 IILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNII 587 (1178)
Q Consensus 553 i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~ 587 (1178)
+++++.+ +...+..+++++++.|++|+.+..+
T Consensus 355 il~~~~~---~~~~~~~l~s~lt~~y~~ri~~~~~ 386 (470)
T PRK07234 355 TLKNLLP---WQAIALNLAAVGTAASFWKFIFLPF 386 (470)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999875 4456677899999999999987776
|
|
| >MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-49 Score=455.37 Aligned_cols=302 Identities=25% Similarity=0.430 Sum_probs=266.8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhh
Q psy5224 277 SGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQ 355 (1178)
Q Consensus 277 ~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~ 355 (1178)
..|++..+.|+|++.+|++||++++++|.+++.|++ +++.||++||+++|.+||.++|+|+..+|..+| +++++....
T Consensus 3 ~lg~~~~~~s~dl~~~~v~~El~~i~~~~Li~~~~~~~~~~~aa~kyfi~~~~gS~~~L~g~~~l~~~~g-~~~~~~~~~ 81 (365)
T MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTG-GLHLSYINL 81 (365)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHH
Confidence 347788889999999999999999999999999874 467899999999999999999999999888777 655543321
Q ss_pred h-----hhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHH-HHHhhhchhhHHHH
Q psy5224 356 L-----SITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLL-RFSLPIFPDASYYF 429 (1178)
Q Consensus 356 ~-----~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~-r~~~~~~~~~~~~~ 429 (1178)
. +.++..+.+...++++|+++|+|++|||.|+||+|+++|+++++++++ +.|+|.|+++ |+.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~K~~~~PfH~Wlpd~~~~ap~~~s~lls~-~~K~g~~~ll~~~~~---------~ 151 (365)
T MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAI-VPKLGIFSILVSIGL---------N 151 (365)
T ss_pred HHhccccccchHHHHHHHHHHHHHHHHHHHccccccchhhhCcCCHHHHHHHHH-HHHHHHHHHHHHHHh---------H
Confidence 1 112233556677888999999999999999999999999999999985 7999999998 4421 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 430 SNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM 509 (1178)
Q Consensus 430 ~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~ 509 (1178)
.+++.+++++|+++|++.|++|+|+||++|||||+|+||+++++..+++.+..++++|+++|++.+..+|.+++.. +.
T Consensus 152 ~~~l~~l~~~s~i~g~~~al~Q~dlKrllAYSSIsh~G~ill~~~~~~~~~~~~~~~~~~~~~l~~~~lf~~~~~~--~~ 229 (365)
T MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL--NV 229 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hc
Confidence 3567889999999999999999999999999999999999999999999999999999999999999999988765 34
Q ss_pred cccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy5224 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIF 588 (1178)
Q Consensus 510 ~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~ 588 (1178)
+++++++++|+.+++|..+..+.++.+|++|+||++||++|++++.++.+.+ ++.+.++.+++++++.|++|++++.++
T Consensus 230 ~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~i~~~~svls~~yyl~~~~~~~~ 309 (365)
T MTH00196 230 YKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFF 309 (365)
T ss_pred CcccHHHHhChHhhChHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999999999999999999876 566777888999999999999999999
Q ss_pred hhh
Q psy5224 589 VLG 591 (1178)
Q Consensus 589 g~~ 591 (1178)
++.
T Consensus 310 ~~~ 312 (365)
T MTH00196 310 QAN 312 (365)
T ss_pred CCC
Confidence 865
|
|
| >KOG2951|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-51 Score=419.89 Aligned_cols=260 Identities=32% Similarity=0.565 Sum_probs=227.5
Q ss_pred CCccccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc---CC
Q psy5224 916 GSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL---TN 991 (1178)
Q Consensus 916 ~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~---~~ 991 (1178)
++.+++.+.+.+++++||+++++.+++........|+ +-|+||+.|+++|+++.+.|+++||+|+++|||+... ..
T Consensus 3 ~~le~~~~~a~~lv~kaG~i~~e~~~~~~~~~~~k~~~~~DlVT~~Dk~vE~~l~e~i~~~~P~hkfIGEE~~a~~~~~~ 82 (279)
T KOG2951|consen 3 SDLEECEDFAIELVKKAGPIIREGFQKAFRKYDDKKSSFVDLVTATDKQVEELLIEGIKARYPSHKFIGEESTAKGETKE 82 (279)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcccceeeeccCCccceeehhHHHHHHHHHHHHHHhCCCceeeeehhhhcCCcce
Confidence 4467788999999999999999988764333334444 5799999999999999999999999999999998542 23
Q ss_pred CCCccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEE
Q psy5224 992 FENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIG 1071 (1178)
Q Consensus 992 ~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~ 1071 (1178)
.+++++|||||||||+||+++.|.+||||||..+++|++||||+|..+|+|.|.+|+|+++||+|++++.++.+.++++.
T Consensus 83 lTd~PTWIIDPIDGTtNFVh~~P~~ciSiGLaink~~v~GvVyNP~~nel~ta~~G~GAf~NG~~I~vs~~~~L~kAlv~ 162 (279)
T KOG2951|consen 83 LTDAPTWIIDPIDGTTNFVHGFPHVCISIGLAINKEPVVGVVYNPILNELYTARLGKGAFLNGEPIRVSSQTKLSKALVA 162 (279)
T ss_pred ecCCCcEEEcCCCCccccccCCCeeEEeeeehhcCeeEEEEeccchhhhhhhhhcCccceeCCceeeecchhhhhhhhee
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCC--ChHHHHHHH-HHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCC
Q psy5224 1072 TDFSFKNNI--NSEEYAKIF-QIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKG 1148 (1178)
Q Consensus 1072 ~~~~~~~~~--~~~~~~~~~-~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G 1148 (1178)
++.+..+.. .+...++.. +...+...+|+.||+++.+|+||+|++|+|++.++++||+|||.+|++||||+|+|+.|
T Consensus 163 ~e~g~~~~~~~~~~~~~r~~~~~~~~~~g~r~~gs~a~~lc~VAsG~~Day~e~gl~~WD~aAg~~Iv~EAGGvv~d~~g 242 (279)
T KOG2951|consen 163 TEIGLLRDEATLDKAYSRLYSKVGAKAHGLRSIGSAALNLCMVASGAADAYYEFGLHPWDVAAGWLIVTEAGGVVTDPTG 242 (279)
T ss_pred eeccccccHHHHHHHHHHHHHHhccccceeeeecHHHHHHHHHHcCCcceeeecCCCHHHhccceEEEEccCceEECCCC
Confidence 988765432 234445555 44456788999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEE-EeChHHHHHHHHHHhh
Q psy5224 1149 EKNYLYTGDIV-AGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1149 ~~~~~~~~~iv-a~~~~l~~~l~~~l~~ 1175 (1178)
.|+..-+++++ |+++++.+++-+.+++
T Consensus 243 g~fdim~~~~~~A~t~~l~~~i~~~l~~ 270 (279)
T KOG2951|consen 243 GPFDIMSRRVIAAATRELAAEISSELTQ 270 (279)
T ss_pred CcccccccceeeeCcHHHHHHHHHHHHh
Confidence 99888777755 6888888888877765
|
|
| >PRK10757 inositol monophosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-49 Score=437.96 Aligned_cols=257 Identities=37% Similarity=0.700 Sum_probs=225.2
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWI 999 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wv 999 (1178)
++++.+.+++++|++.+++.+++....++++|+++|+||++|+++|+.|++.|++.||++.|+|||.+.....+++++|+
T Consensus 3 ~~l~~a~~~a~~ag~~i~~~~~~~~~~~~~~k~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~~Wi 82 (267)
T PRK10757 3 PMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGEDQDVQWV 82 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchhHHHHHHHHHHHHHHHHHCCCCEEEecccCCccCCCCCCEEE
Confidence 46789999999999999998876556777888999999999999999999999999999999999987643345668999
Q ss_pred EeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCC
Q psy5224 1000 IDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNN 1079 (1178)
Q Consensus 1000 IDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1178)
|||||||+||++|.|.||++||+.++|+|++||||+|.++|+|+|.+|+|+|+||+|++++..++++++.+.++.+....
T Consensus 83 IDPIDGT~nf~~g~p~~~vsial~~~g~pv~GvV~~P~~~~~~~A~~G~Ga~~ng~~i~~s~~~~l~~~~v~~~~~~~~~ 162 (267)
T PRK10757 83 IDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAK 162 (267)
T ss_pred EeCccCchHHHhCCCcEEEEEEEEECCEEEEEEEEcCCCCCEEEEECCccccCCCEEeccCCCCChHHcEEEecCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888776553322
Q ss_pred CCh-HHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCcE
Q psy5224 1080 INS-EEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158 (1178)
Q Consensus 1080 ~~~-~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~i 1158 (1178)
... .......+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|+|||||.++|.+|+|....++.+
T Consensus 163 ~~~~~~~~~~~~l~~~~~~~r~~Gs~al~l~~vA~G~~d~~~~~~~~~wD~aAg~~iv~eAGG~v~~~~G~~~~~~~~~~ 242 (267)
T PRK10757 163 QHATTYINIVGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNI 242 (267)
T ss_pred cchHHHHHHHHHHHHhhccEecccHHHHHHHHHHhCCccEEEECCCCHHHHHHHHHHHHhCCCeEeCCCCCcccccCCeE
Confidence 222 2222233444566789999999999999999999999999999999999999999999999999999976667789
Q ss_pred EEeChHHHHHHHHHHhhh
Q psy5224 1159 VAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1159 va~~~~l~~~l~~~l~~~ 1176 (1178)
+|+|+++|+++++.++++
T Consensus 243 iaa~~~~~~~l~~~l~~~ 260 (267)
T PRK10757 243 VAGNPRVVKAMLANMRDE 260 (267)
T ss_pred EEECHHHHHHHHHHHHhh
Confidence 999999999999999764
|
|
| >MTH00063 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=449.93 Aligned_cols=337 Identities=15% Similarity=0.208 Sum_probs=279.6
Q ss_pred ccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5224 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFI 305 (1178)
Q Consensus 229 ~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~ 305 (1178)
++++ +.+|.++..+..++.+++..+.+++.++ +++.++|+.++++...++.+++.|+|++++|++||++++++|.
T Consensus 37 ~~i~--~~~D~lS~~~~ll~~~~~~l~l~ys~~Y~~~~~~~~~f~~llllf~~gm~~lv~S~dl~~~~v~wEl~sl~sy~ 114 (522)
T MTH00063 37 WLIN--FDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFF 114 (522)
T ss_pred EEEE--EeehHHHHHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4444 4689999999999999999999999533 2233478999999999999999999999999999999999999
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 306 IIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 306 Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
|++.++++++.||+.||++.+.+|+..+++++...+. ++ + .+.....+++++++.|++++|||.
T Consensus 115 LI~~~~~~~s~~Aa~kyli~s~~G~~~l~l~ig~~~~-~g-~--------------~~~~~~~~l~l~~~~Ksa~fPfH~ 178 (522)
T MTH00063 115 LILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCW-GG-S--------------GSFLCCLFFFLIVFTKSASFPFIS 178 (522)
T ss_pred HHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC-c--------------HHHHHHHHHHHHHHHHHHhcccHh
Confidence 9999988888999999999999999977766654322 22 1 112333445568899999999999
Q ss_pred cccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchh
Q psy5224 386 WLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~ 464 (1178)
|+||+| +||+|+++++ ++..+|+|+|++.|+.....++ .+..++.++|++|+++|++.|++|+|+||++|||||+
T Consensus 179 WLPda~-~APTpVSall~s~~~v~aGvy~l~R~~~~~~~~---~~~~~l~vlg~lT~i~g~l~Al~Q~DlKRlLAYSSIs 254 (522)
T MTH00063 179 WLLEAM-RAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFS---WLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCN 254 (522)
T ss_pred hhhhhc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999997 7999999977 6667799999999986544322 4567889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-chhcc--cchhhhhHHHHHHHHHHHHhhcCC
Q psy5224 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTR-LISNF--GGIINVIPHFSVFFIIFSLANCSL 541 (1178)
Q Consensus 465 ~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~-~l~~~--~gl~~~~p~~~~~~~i~~ls~~Gl 541 (1178)
|+||+++++..++ ..++++|+++|++.|+.+|+++|.+.++++++ +.+++ ++...+.+ ...+.+..++++|+
T Consensus 255 qiGyill~l~~g~---~~~al~~ll~Hal~K~~LF~~~G~i~~~~~~~~~~~~~~~~~~~g~~~--~~~~~i~~lsL~Gi 329 (522)
T MTH00063 255 NISWCVLYLIYGD---VILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWN--LFYLFLLVLGLSGV 329 (522)
T ss_pred HHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHhhccccchHH--HHHHHHHHHHHHhC
Confidence 9999999998864 46899999999999999999999998776544 33332 33332222 24566778999999
Q ss_pred CCCcccchHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 542 PGTSGFIGEFMIILSAVKFN--FCIGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 542 Pp~~gF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
||+.||++|+.++.++.+.+ ++...+..++++++..|++|+.+.++++++.
T Consensus 330 Pp~~GF~sK~~i~~~~~~~~~~~~l~~i~~l~svlS~~Y~~Rl~~~~f~~~~~ 382 (522)
T MTH00063 330 PFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSS 382 (522)
T ss_pred cccchHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999864 5677788999999999999999999988754
|
|
| >COG0483 SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-49 Score=432.18 Aligned_cols=253 Identities=38% Similarity=0.641 Sum_probs=226.9
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccC-CcCCCCCccEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSN-YLTNFENENIW 998 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~-~~~~~~~~~~w 998 (1178)
.++.+.+++++|++.+.+.+++.+..+++.|+ ++|+||++|+++|+.|++.|++.||+|.|+|||.+ ....+ .+++|
T Consensus 4 ~~~~~~~~a~~a~~~i~~~f~~~~~~~~~~k~~~~d~VT~aD~~aE~~i~~~l~~~~P~~~ilgEE~g~~~~~~-~~~~w 82 (260)
T COG0483 4 MLNIALRAARKAGALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDHGILGEESGGALGGG-DEYVW 82 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeeecCCCCCcccHHHHHHHHHHHHHHHHHCCCCcEEeeccCccccCC-CceEE
Confidence 56778889999999999999887777777777 99999999999999999999999999999999998 33333 33899
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
||||||||+||++|+|.||||||+.++|+|+.|+||+|.++|+|+|.+|+|+++|+++++++.+.++.......+.+...
T Consensus 83 VIDPIDGT~NFv~G~P~favSIa~~~~g~~~~Gvi~~P~~~e~~~A~~G~GA~ln~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
T COG0483 83 VIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYDPATGELYTAAKGKGAYLNGRRIKVSLRTSLNASLLGTGFPGKS 162 (260)
T ss_pred EEcCCCCcHHHHcCCCcceEEEEEEECCeEEEEEEeccccCceEEEecCccccccCCcccccccccchheeEeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888876654
Q ss_pred CCC-hHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCC-C
Q psy5224 1079 NIN-SEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT-G 1156 (1178)
Q Consensus 1079 ~~~-~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~-~ 1156 (1178)
... ............+..++|+.||+++++|+||+|++|+|++.++++||+|||.+|+|||||.++|.+|+|..... +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~R~~Gsaal~la~vA~G~~d~~~~~~l~~WD~aAg~li~~eAGG~v~~~~g~~~~~~~~~ 242 (260)
T COG0483 163 LARFPAYLNILAKLLRKVRRVRRYGSAALDLAYVAAGRLDGFVEFGLRPWDIAAGVLIVREAGGIVTDLDGGPLDPNSGG 242 (260)
T ss_pred cccchhHHHHHHHHHHHhcCEEechHHHHHHHHHhcCceeEEEeCCCCHHHHHHHHHHHHhcCCEEECCCCCCcCCCCCc
Confidence 432 22233445667788999999999999999999999999999999999999999999999999999999988776 7
Q ss_pred cEEEeChHHHHHHHHHHh
Q psy5224 1157 DIVAGNQKIFSQIISLIN 1174 (1178)
Q Consensus 1157 ~iva~~~~l~~~l~~~l~ 1174 (1178)
.++|+|+++|+++++.++
T Consensus 243 ~iva~~~~~~~~~l~~~~ 260 (260)
T COG0483 243 SIVAGNPKLHDELLEALR 260 (260)
T ss_pred eEEEcCHHHHHHHHHHhC
Confidence 899999999999998764
|
|
| >PLN02737 inositol monophosphatase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=439.89 Aligned_cols=270 Identities=22% Similarity=0.434 Sum_probs=229.3
Q ss_pred hhhhcccCCCCCCccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEee
Q psy5224 905 GGRIIKDCPGVGSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984 (1178)
Q Consensus 905 ~~r~~~~~~~~~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigE 984 (1178)
|-|+--.+-.+...+++++.+.+++++|++.+++.+++ ..++++|+++|+||++|+++|+.|++.|++.||+|.|+||
T Consensus 63 ~~~~~~~~~~~~~~~~~l~~A~~aA~~Ag~~i~~~~~~--~~~v~~K~~~d~VT~aD~~aE~~I~~~L~~~fP~~~IlgE 140 (363)
T PLN02737 63 YPRVGAASTGPIPAEELLAVAELAAKTGAEVVMEAVNK--PRNISYKGLTDLVTDTDKASEAAILEVVRKNFPDHLILGE 140 (363)
T ss_pred CcccccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhhc--ccceeecCCCchhhHHHHHHHHHHHHHHHHHCCCCEEEec
Confidence 44443333333445578999999999999999887754 3457789999999999999999999999999999999999
Q ss_pred ccCCcCCCCCccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecC------CCcEEEEecCCceEEcCeecc
Q psy5224 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI------RNDLFTAIKGCGAYLNEKRIR 1058 (1178)
Q Consensus 985 E~~~~~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~------~~~~~~a~~g~ga~~n~~~~~ 1058 (1178)
|.+.....+.+++|+|||||||+||++|.|.|||+||+.++|+|++|+||+|. +||+|+|.+|+|+++||+|++
T Consensus 141 E~g~~~~~~~~~~WiIDPIDGT~NFv~G~P~faVsIAL~~~G~pv~GvV~~P~~~P~~~~~e~f~A~~G~GA~lNg~~l~ 220 (363)
T PLN02737 141 EGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGTPAAATVVEFVGGPMCWNTRTFSASAGGGAFCNGQKIH 220 (363)
T ss_pred CCCCCCCCCCCcEEEEecccCHHHHHhCCCCeEEEEEEEECCEEEEEEEEeccccCcccCCcEEEEECCceeeECCEecc
Confidence 98753333567899999999999999999999999999999999999999976 699999999999999999999
Q ss_pred cCCCCCCCCcEEEeccCCCCCC-ChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHH
Q psy5224 1059 VNKRNKINDALIGTDFSFKNNI-NSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLII 1137 (1178)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~ 1137 (1178)
+++.++++++.+.++.+..... .........+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|+|
T Consensus 221 vs~~~~l~~a~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~R~~GSaaL~l~~VA~G~~D~y~~~~l~~WD~AAg~lIv~ 300 (363)
T PLN02737 221 VSQTDKVERSLLVTGFGYEHDDAWATNIELFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVE 300 (363)
T ss_pred cCCCCChhceEEEEccCcccchhhHHHHHHHHHHHhhcCeEEeccHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHHHH
Confidence 9988888888888776543221 112222233445566789999999999999999999999999999999999999999
Q ss_pred HcCCcccccCCCCCCCCCCcEEEeChHHHHHHHHHHhhh
Q psy5224 1138 ESGGIISNFKGEKNYLYTGDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1138 eaGg~v~d~~G~~~~~~~~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
||||.++|.+|+|....++.++|+|+++|+++++.++++
T Consensus 301 EAGG~vtdl~G~~~~~~~~~vlaa~~~l~~~ll~~l~~~ 339 (363)
T PLN02737 301 EAGGTVTRMDGGKFSVFDRSVLVSNGVLHPKLLDRIGPA 339 (363)
T ss_pred HCCCEEecCCCCcccCCCCeEEEECHHHHHHHHHHHHHh
Confidence 999999999999976667789999999999999999764
|
|
| >PLN02553 inositol-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=432.18 Aligned_cols=257 Identities=32% Similarity=0.569 Sum_probs=223.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC---CCCC
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT---NFEN 994 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~---~~~~ 994 (1178)
..++++.+.+++++|++.+++.+++ ..+++.|+++|+||++|+++|+.|++.|++.+|+|.|+|||.+... ..++
T Consensus 7 ~~~~~~~a~~~a~~ag~~i~~~~~~--~~~~~~k~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~~ 84 (270)
T PLN02553 7 LEQFLEVAVDAAKAAGQIIRKGFYQ--TKHVEHKGQVDLVTETDKACEDLIFNHLKQAFPSHKFIGEETTAASGGTELTD 84 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--ccceeecCCCCcccHHHHHHHHHHHHHHHHHCCCCEEEeccccccCCcccCCC
Confidence 4568899999999999999988754 2356778899999999999999999999999999999999986432 1245
Q ss_pred ccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEecc
Q psy5224 995 ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDF 1074 (1178)
Q Consensus 995 ~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~ 1074 (1178)
+++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+||+|+++++.++++++.+.++.
T Consensus 85 ~~~WiIDPIDGT~NF~~g~p~~avsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~l~~~~~~~l~~~~i~~~~ 164 (270)
T PLN02553 85 EPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPILDELFTAVKGKGAFLNGKPIKASSQSELGKALLATEV 164 (270)
T ss_pred CcEEEEecccchhhHhhcCCceEEEEEEEECCEEEEEEEecCCCCCeEEEEcCccccCCCccccCCCCCCHhHcEEEeCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999998888888887765
Q ss_pred CCCCCC--ChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC-CccchHHHHHHHHHcCCcccccCCCCC
Q psy5224 1075 SFKNNI--NSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNFKGEKN 1151 (1178)
Q Consensus 1075 ~~~~~~--~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~-~~wD~aA~~~i~~eaGg~v~d~~G~~~ 1151 (1178)
+..... .........+...+..++|+.||+++++|+||+|++|+|++.+. ++||+|||.+|++||||.++|.+|+|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~l~~~~~~~R~~Gs~al~l~~VA~G~~D~~~~~~~~~~WD~AAg~li~~EAGG~v~~~~G~~~ 244 (270)
T PLN02553 165 GTKRDKATVDATTNRINALLYKVRSLRMSGSCALNLCGVACGRLDIFYEIGFGGPWDVAAGAVIVKEAGGLVFDPSGGPF 244 (270)
T ss_pred CccccchhHHHHHHHHHHHHHhhceeccccHHHHHHHHHHcCCcCEEEEcCCCCcHHHHHHHHHHHhCCCEEECCCCCcc
Confidence 432221 11222223344456678999999999999999999999999887 699999999999999999999999997
Q ss_pred CCCCCcEEEeChHHHHHHHHHHhhh
Q psy5224 1152 YLYTGDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1152 ~~~~~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
...++.++|+|+++|+++++.+++.
T Consensus 245 ~~~~~~~ia~~~~l~~~l~~~l~~~ 269 (270)
T PLN02553 245 DIMSRRVAASNGHLKDAFVEALRQT 269 (270)
T ss_pred ccCCCcEEEECHHHHHHHHHHhhcC
Confidence 7677789999999999999998764
|
|
| >MTH00198 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-47 Score=449.73 Aligned_cols=333 Identities=21% Similarity=0.326 Sum_probs=279.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCc---------chHH
Q psy5224 248 TAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN---------RSYA 318 (1178)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~---------~~~a 318 (1178)
...++....++-.+ +++.++|+.++++...|.+.++.|+|++++|+++|++++++|.|+..+++++ +.||
T Consensus 170 ~~~~~~~~~~~~~~-~~~~~~f~~LiLl~~lG~llliSS~dl~~lyl~lEl~sL~~yiLi~~~~~~~s~~~~~~~~s~eA 248 (607)
T MTH00198 170 VILLSLMGLLFLTN-ERGPRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGNTPPES 248 (607)
T ss_pred HHHHhhHHHHHhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHH
Confidence 33344444444433 4566789999999999999999999999999999999999999999887655 4799
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHH------hhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccC
Q psy5224 319 AIKFFLYTLMGSLLMLISMIYLYYISNKSFNILS------WHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHV 392 (1178)
Q Consensus 319 a~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~ 392 (1178)
++||+++|.+||.++|+|+.++|..+| +++... +...+.+.....+...++++|+++|+|++|||+|+||+|+
T Consensus 249 glKYFIlqa~gS~~lL~Gi~lly~~tG-s~~~~~~i~~~~l~~~~~~~~~~~~~~llIligllfKlg~fPFH~WlPDVy~ 327 (607)
T MTH00198 249 GLKYWILGAMSSGFYLFGCALYFGFTG-NEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYE 327 (607)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CcchhhhHhhhhhhhcccchhHHHHHHHHHHHHHHHHHhhcchhhhHHHHHh
Confidence 999999999999999999999888777 544311 1111111112234566788999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHH
Q psy5224 393 EAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472 (1178)
Q Consensus 393 ~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~ 472 (1178)
++|++++++++ ++.|+++|+++|... ....++.+++++|+++|++.|++|+|+||++|||||+|+||++++
T Consensus 328 gaPt~vsalLs-tv~Ki~~~~lL~~l~--------~~~~lLlil~ilSmiiGai~AL~QtdIKRLLAYSSIsH~G~ILlg 398 (607)
T MTH00198 328 GAPTPTTALIA-IIPKFTVYILLTSLV--------ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIG 398 (607)
T ss_pred cCCHHHHHHHH-HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 568999999988531 123567789999999999999999999999999999999999999
Q ss_pred HHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------cccchhcccchhhhhHHHHHHHHHHH
Q psy5224 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM-----------------KTRLISNFGGIINVIPHFSVFFIIFS 535 (1178)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~-----------------~~~~l~~~~gl~~~~p~~~~~~~i~~ 535 (1178)
+..++..+.+++++|++.|.+++..+|.+.+.+++.. +.+++.+++|+.+++|..+..+.+++
T Consensus 399 l~~~t~~gi~~~l~Yli~Y~i~~l~lF~ii~~l~~~~~~~~t~~~~~~~~~~~~~i~~I~~L~Gl~~~~P~la~~f~I~l 478 (607)
T MTH00198 399 VSAGTYESLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIVF 478 (607)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccccchHHHHHHHhhchhhhCHHHHHHHHHHH
Confidence 9999999999999999999999999999888776521 12578899999999999999999999
Q ss_pred HhhcCCCCCcccchHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 536 LANCSLPGTSGFIGEFMIILSAVKFN--------FCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 536 ls~~GlPp~~gF~~k~~i~~~~~~~~--------~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
+|++|+||+.||++||+++.++.+.+ ++++++++++++++++||+|+.++++++..
T Consensus 479 LSLAGIPPl~GF~~K~~Il~s~i~~~~~~~~~~~~~Lali~IlsSvIS~~YYLRii~~~ff~~~ 542 (607)
T MTH00198 479 LSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVATIYFNFT 542 (607)
T ss_pred HHHhccchhhhHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999998743 456677889999999999999999999854
|
|
| >PLN02911 inositol-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-48 Score=431.23 Aligned_cols=252 Identities=20% Similarity=0.322 Sum_probs=216.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-CCCCcc
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT-NFENEN 996 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~-~~~~~~ 996 (1178)
..++++.+.+++++|++.+++.+++ ..++++|+++|+||++|+++|+.|++.|++.||++.|+|||.+... ..++++
T Consensus 33 ~~~~l~~a~~~a~~Ag~~i~~~~~~--~~~~~~K~~~d~VT~aD~~~E~~I~~~L~~~~P~~~ilgEE~~~~~~~~~~~~ 110 (296)
T PLN02911 33 LDRFVDVAHKLADAAGEVTRKYFRT--KFEIIDKEDLSPVTIADRAAEEAMRSIILENFPSHAIFGEEHGLRCGEGSSDY 110 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--CCceeecCCCCcccHHHHHHHHHHHHHHHHHCCCCeEEeccCCCCCCCCCCCc
Confidence 4568899999999999999998754 3667889999999999999999999999999999999999987643 234578
Q ss_pred EEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 997 IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 997 ~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
+|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+||+|+++++.++++++.+.++.+.
T Consensus 111 ~WiIDPIDGT~NFv~G~p~favsIal~~~g~pv~GvV~~P~~~e~y~A~~G~Ga~~ng~~i~~s~~~~l~~~~v~~~~~~ 190 (296)
T PLN02911 111 VWVLDPIDGTKSFITGKPLFGTLIALLYKGKPVLGIIDQPVLKERWVGVAGRATTLNGEEISTRSCASLKDAYLYTTSPH 190 (296)
T ss_pred EEEEeCCcChHHHhcCCCceEEEEEEEECCEEEEEEEecCCCCCEEEEECCeeeeECCeeeecCCCCChHHcEEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888887765443
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCC--
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLY-- 1154 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~-- 1154 (1178)
... .+.... .....+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|..++
T Consensus 191 ~~~--~~~~~~-~~~l~~~~~~r~~Gsaal~l~~VA~G~~D~~~~~~~~~WD~AAg~lIv~EAGG~vt~~~G~~~~~~~~ 267 (296)
T PLN02911 191 MFS--GDAEDA-FARVRDKVKVPLYGCDCYAYGLLASGHVDLVVESGLKPYDYLALVPVVEGAGGVITDWKGRKLRWEPS 267 (296)
T ss_pred ccc--chHHHH-HHHHHhhcceeecchHHHHHHHHhCCCccEEEECCCChHHHHHHHHHHHhCCCEEECCCCCccccccc
Confidence 211 111122 222233456999999999999999999999999999999999999999999999999999986553
Q ss_pred -------CCcEEEeChHHHHHHHHHHh
Q psy5224 1155 -------TGDIVAGNQKIFSQIISLIN 1174 (1178)
Q Consensus 1155 -------~~~iva~~~~l~~~l~~~l~ 1174 (1178)
++.++|+|+++|+++++.++
T Consensus 268 ~~~~~~~~~~i~a~~~~l~~~l~~~l~ 294 (296)
T PLN02911 268 PGSLATSFNVVAAGDARLHKQALDILE 294 (296)
T ss_pred cccccCCCCeEEEcCHHHHHHHHHHhc
Confidence 24578999999999998875
|
|
| >TIGR02067 his_9_proposed histidinol-phosphate phosphatase HisN, inositol monophosphatase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=422.79 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=214.5
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWII 1000 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wvI 1000 (1178)
+++.+.+++++|++.+++.+++. ...+++|+++|+||++|+++|+.|++.|++.+|++.|+|||++.....+++++|+|
T Consensus 1 ~~~~a~~~a~~ag~~i~~~~~~~-~~~~~~k~~~d~vT~aD~~~e~~i~~~L~~~~P~~~il~EE~~~~~~~~~~~~Wii 79 (251)
T TIGR02067 1 LLAFAEDLADAAGETILPFFRAS-LLVVDKKSDKTPVTEADRAAEEAMRELIAAFFPDHGILGEEFGHNEEGDAERVWVL 79 (251)
T ss_pred ChHHHHHHHHHHHHHHHHHhccC-CceeeecCCCCcccHHHHHHHHHHHHHHHHHCCCCEEEecccCCCCCCCCceEEEE
Confidence 35789999999999999887652 34567888999999999999999999999999999999999875333456789999
Q ss_pred eccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCC
Q psy5224 1001 DPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNI 1080 (1178)
Q Consensus 1001 DPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1178)
||||||+||++|.|.||++||+.++|+|++||||+|.+|++|+|.+|+|+|+|++|+++++.++++++.+.++.+....
T Consensus 80 DPIDGT~nF~~g~p~~~vsial~~~g~p~~gvv~~P~~~~~~~A~~G~Ga~~ng~~i~~~~~~~~~~~~v~~~~~~~~~- 158 (251)
T TIGR02067 80 DPIDGTKSFIRGVPVWGTLIALVEGGMPVLGVIFQPATGERWWAAGGGAAFLGGRRLRVSSCANLSDAVLFTTSPYLLD- 158 (251)
T ss_pred ecCcChhHHhcCCCceEEEEEEEECCEEEEEEEEEcCCCCEEEEeCCceEEECCEEEEeCCCCChhHcEEEecCchhcc-
Confidence 9999999999999999999999999999999999999999999999999999999999998888888888777543221
Q ss_pred ChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCcEEE
Q psy5224 1081 NSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVA 1160 (1178)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~iva 1160 (1178)
.++. ....+...+..++|+.||+++++|+||+|+.|+|++.+.++||+|||.+|++||||.++|.+|+|....++.++|
T Consensus 159 ~~~~-~~~~~~~~~~~~~r~~Gs~al~l~~vA~G~~d~~~~~~~~~WD~aAg~li~~eaGG~v~~~~G~~~~~~~~~v~a 237 (251)
T TIGR02067 159 DPEN-RPAFQRLRDAARLTRYGGDCYAYLMVAGGAVDIVVEPGLSPWDIAALIPVIEEAGGCFTDWDGKPAPDGGGAVAA 237 (251)
T ss_pred chhH-HHHHHHHHHhcCeeccHHHHHHHHHHhCCceeEEEECCCChHHhhhhHHHHHhcCCEEECCCCCccCCCCCEEEe
Confidence 1112 122222223446999999999999999999999999999999999999999999999999999997544333678
Q ss_pred eChHHHHHHHHHH
Q psy5224 1161 GNQKIFSQIISLI 1173 (1178)
Q Consensus 1161 ~~~~l~~~l~~~l 1173 (1178)
+|+++|+++++.+
T Consensus 238 ~~~~~~~~~~~~l 250 (251)
T TIGR02067 238 GNAMLHDEALAIL 250 (251)
T ss_pred cCHHHHHHHHHHh
Confidence 9999999999876
|
This subfamily belongs to the inositol monophosphatase family (pfam00459). The members of this family consist of no more than one per species and are found only in species in which histidine is synthesized de novo but no histidinol phosphatase can be found in either of the two described families (TIGR01261, TIGR01856). In at least one species, the member of this family is found near known histidine biosynthesis genes. |
| >TIGR01770 NDH_I_N proton-translocating NADH-quinone oxidoreductase, chain N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=439.86 Aligned_cols=311 Identities=42% Similarity=0.778 Sum_probs=269.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+...+..|+|++.+|++||++++++|.++..+++++++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 114 g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~s~eaa~kYfi~~~~~s~~lL~g~~lly~~~Gs~~~~~i~~~~~ 193 (468)
T TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFYVLAALKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS 193 (468)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Confidence 45666789999999999999999999999877677778999999999999999999999999999999999988765433
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
....++.....+..++++|+++|+|++|||.|+||+|+++|+++++++++++|+++++++.|+.....++....++..+.
T Consensus 194 ~~~~~~~~~~~~~~lil~g~~~K~g~~PfH~WlPd~y~~apt~vsalls~~~K~~~~~~l~r~~~~~~~~~~~~~~~~l~ 273 (468)
T TIGR01770 194 NLGNDISLLLLGIVFILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLL 273 (468)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhcccccccchhhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 22222223445667888999999999999999999999999999999999999999998888765544443345677888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|++.|.+++.++|...+.++
T Consensus 274 ~l~~~s~~~g~l~al~Q~dlKrlLAYSSI~~~G~il~~l~~~~~--------~g~~~~~~~~~~y~~~~~~lF~~~~~~~ 345 (468)
T TIGR01770 274 ICAVLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL--------EGIKAVLFYIFIYALMSIGAFGVLALLR 345 (468)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876432 3567889999999999999999888877
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+++.++++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++++.++.+.+++..+.+++|++++. |.|+.
T Consensus 346 ~~~~~~~~~l~~l~Gl~~~~P~~a~~~~i~~lsl~GiPP~~GF~~K~~i~~~~~~~~~~~l~~i~~l~s~ls~~yylr~~ 425 (468)
T TIGR01770 346 SRKDEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYLLAVIAILTSVISAFYYLRVV 425 (468)
T ss_pred hccCCccccHHHhhChhhhChHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 52323478899999999999999999999999999999999999999999999998888788788889999988 89887
|
NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. |
| >cd01641 Bacterial_IMPase_like_1 Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-47 Score=415.19 Aligned_cols=243 Identities=23% Similarity=0.350 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEEEe
Q psy5224 922 IVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIID 1001 (1178)
Q Consensus 922 l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wvID 1001 (1178)
++.+.+++++|++.+++.+++. .+++.|+++|+||++|+++|+.|++.|++.||++.|+|||.+.. ..+++++|+||
T Consensus 2 l~~a~~~a~~ag~~~~~~~~~~--~~~~~k~~~d~vT~aD~~ae~~i~~~L~~~~P~~~il~EE~~~~-~~~~~~~WviD 78 (248)
T cd01641 2 LAFALELADAAGQITLPYFRTR--LQVETKADFSPVTEADRAAEAAMRELIAAAFPDHGILGEEFGNE-GGDAGYVWVLD 78 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhhcc--cceEEcCCCCccCHHHHHHHHHHHHHHHHHCCCCeEEEccccCC-CCCCCcEEEEe
Confidence 4678999999999999877542 66778999999999999999999999999999999999998763 23567899999
Q ss_pred ccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEc---CeecccCCCCCCCCcEEEeccCCCC
Q psy5224 1002 PLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLN---EKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 1002 PIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n---~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
|||||+||++|.|.|||+||+.++|+|++|+||+|.+|++|+|.+|+|+++| ++|+++++.++++++.+.++.+...
T Consensus 79 PIDGT~nf~~g~p~~~vsial~~~g~p~~gvV~~P~~~~~~~A~~G~Ga~~n~~~g~~i~~~~~~~l~~~~v~~~~~~~~ 158 (248)
T cd01641 79 PIDGTKSFIRGLPVWGTLIALLHDGRPVLGVIDQPALGERWIGARGGGTFLNGAGGRPLRVRACADLAEAVLSTTDPHFF 158 (248)
T ss_pred cCcCchhHhcCCCceEEEEEEEECCEEEEEEEccCccCCEEEEeCCceEEEcCCCCeeeeeCCCCChHHeEEEecCchhc
Confidence 9999999999999999999999999999999999999999999999999999 9999999888888888887654321
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCcE
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~i 1158 (1178)
. ........+... ..+.|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|..++++.+
T Consensus 159 ~--~~~~~~~~~l~~-~~~~~~~gs~al~l~~VA~G~~D~~~~~~~~~WD~aAg~li~~eAGg~v~d~~G~~~~~~~~~~ 235 (248)
T cd01641 159 T--PGDRAAFERLAR-AVRLTRYGGDCYAYALVASGRVDLVVEAGLKPYDVAALIPIIEGAGGVITDWDGGPLTGGSGRV 235 (248)
T ss_pred c--hhhHHHHHHHHH-hcCEEechHHHHHHHHHhcCCeEEEEECCCCHHHHhhHHHHHHhCCCEEECCCCCCCCCCCCeE
Confidence 1 112222222323 3456668999999999999999999999999999999999999999999999999987777889
Q ss_pred EEeCh-HHHHHHH
Q psy5224 1159 VAGNQ-KIFSQII 1170 (1178)
Q Consensus 1159 va~~~-~l~~~l~ 1170 (1178)
+|+|+ ++|++++
T Consensus 236 iaa~~~~~~~~~~ 248 (248)
T cd01641 236 VAAGDAELHEALL 248 (248)
T ss_pred EEcCcHHHHHhhC
Confidence 99888 9999864
|
These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates. |
| >PRK12664 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=432.15 Aligned_cols=322 Identities=20% Similarity=0.295 Sum_probs=269.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHH
Q psy5224 243 WFIPLTAFITLIIILISLDIKKK-LAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIK 321 (1178)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~k 321 (1178)
.+.....++.....+|+.+.++. .+++ .++++...++++++.|+|++++|++||+++++++.++..++++++.++++|
T Consensus 39 ~~~~~~~~~~~~~~ly~~~~~~~~~~~~-~~~ll~~~s~l~vv~S~dl~~l~v~~El~sl~s~~LI~~~~~~~~~~Aa~k 117 (527)
T PRK12664 39 VLFIVLSFSLALIFLYILPIKNMRFSEM-LCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIH 117 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Confidence 34444555555666676544442 2343 467777889999999999999999999999999999988777788899999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHH
Q psy5224 322 FFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401 (1178)
Q Consensus 322 y~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ 401 (1178)
|+++|.+||.+++.|+...+. .+ +.+ .....++++|+++|+|++|||.|+||+|+++|++++++
T Consensus 118 Yfliq~~gs~llL~gi~~~~~-~g-~~~--------------~~~~~Lil~gl~iK~glfPfH~WLPday~~ap~~~sal 181 (527)
T PRK12664 118 YACVHFFSGVLLLVGASGQAQ-NG-QYT--------------GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIV 181 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hc-cHH--------------HHHHHHHHHHHHHHHhhcccHhHHHHHHhcCCHHHHHH
Confidence 999999999999998774321 12 110 12335677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhh-
Q psy5224 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKIS- 480 (1178)
Q Consensus 402 ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~- 480 (1178)
++++++|++.|+++|+.. ..+++.++|++|+++|++.|++|+|+||++|||||+|+||++++++.++..+
T Consensus 182 LS~~~~Kva~~~llr~~~---------~~~iLi~lg~lS~i~G~l~AL~Q~dlKRlLAYSSIsq~G~mllgig~~~~~~~ 252 (527)
T PRK12664 182 LSLFTTKVAALVLLLFFS---------GEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGV 252 (527)
T ss_pred HHHHHHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHcchhHH
Confidence 999999999999999631 1356778999999999999999999999999999999999999999876554
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHH
Q psy5224 481 -IQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK 559 (1178)
Q Consensus 481 -~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~ 559 (1178)
..++++|+++|++.|..+|+++|.+.+++|++++++++|+.+ +|.++..+.++.+|++|+||++||++||++++++.+
T Consensus 253 ~~~~~l~hli~h~lyk~lLF~~ag~v~~~~g~~~i~~lgGL~~-mP~~~~~fli~~LSLaGlPPf~GF~sK~lIl~a~~~ 331 (527)
T PRK12664 253 AIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDT 331 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHcChhh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999 999999999999999999999999999999998876
Q ss_pred hhhH----HHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 560 FNFC----IGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 560 ~~~~----~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
.+.. .....+.++++.+.|.+|+....++++.
T Consensus 332 ~~~~~~~~~~~~~l~s~~l~~~~~~k~~~~~F~~~~ 367 (527)
T PRK12664 332 AGLTLVLYKKLFLICSLLLFASVGLKFFWYAFISKS 367 (527)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6532 1245567777888888998888887654
|
|
| >PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=435.88 Aligned_cols=307 Identities=34% Similarity=0.635 Sum_probs=266.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhhHHHHh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT-GTLELQSIFNVI 669 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~-gs~~~~~~~~~~ 669 (1178)
+.+.+..|+|++.+|+++|++++++|.++..+++++++.|+++||+++|.+||.++++|+.++|..+ |++|++++....
T Consensus 122 g~~~l~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~s~eA~~KYfi~~~~gs~~lL~gi~lly~~~~Gs~~~~~l~~~~ 201 (513)
T PRK02504 122 GGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALAL 201 (513)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 4455678899999999999999999999987777777899999999999999999999999999888 999998876532
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.. + +......+..++++|+++|+|++|||.|+||+|+++|+++++++++++|+++++.+.|+.....++....|...+
T Consensus 202 ~~-~-~~~~~~~~~~l~l~g~~~K~~l~PfH~WlPday~~ap~~vsalls~~~K~a~~~~l~R~~~~~~~~~~~~~~~~l 279 (513)
T PRK02504 202 IT-S-PSLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLF 279 (513)
T ss_pred hc-C-CchHHHHHHHHHHHHHHHHHhhccccccchhhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHH
Confidence 21 1 122233455677889999999999999999999999999999999999999999988886544443334566778
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.+++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..+.++|++.|.+++.++|......
T Consensus 280 ~~l~~lS~i~G~l~Al~Q~dlKRlLAYSSIsh~G~illgl~~~~~--------~g~~~~~~yl~~y~~~~~~lF~~~~~~ 351 (513)
T PRK02504 280 TALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTE--------AGYASMVFYLLAYLFMNLGAFACVILF 351 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999865322 355678999999999999999988877
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
+++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|++++.+.++.+.+++..+.+++|+++++ |.|+
T Consensus 352 ~~~~--~~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPP~~GF~~K~~i~~~~~~~~~~~l~~i~ll~s~is~~yylri 429 (513)
T PRK02504 352 SLRT--GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRV 429 (513)
T ss_pred HHcc--CcccHHHhcChhhcCcHHHHHHHHHHHHHcCCCccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 678899999999999999999999999999999999999999999999999888888888889999999 8888
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
+
T Consensus 430 ~ 430 (513)
T PRK02504 430 I 430 (513)
T ss_pred H
Confidence 7
|
|
| >cd01639 IMPase IMPase, inositol monophosphatase and related domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=404.72 Aligned_cols=241 Identities=43% Similarity=0.777 Sum_probs=208.7
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWI 999 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wv 999 (1178)
+++.+.+++++|++.+++.+++. ..+++.|+ ++|+||++|+++|+.|++.|++.+|++.|+|||.+.....+++++|+
T Consensus 1 ~l~~a~~~a~~a~~~i~~~~~~~-~~~~~~K~~~~d~vT~aD~~~e~~i~~~L~~~~p~~~i~~EE~~~~~~~~~~~~Wv 79 (244)
T cd01639 1 LLNIAIEAARKAGEILLEAYEKL-GLNVEEKGSPVDLVTEVDKAVEKLIIEILKKAYPDHGFLGEESGAAGGLTDEPTWI 79 (244)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcc-cceEEecCCCCcchhHHHHHHHHHHHHHHHHHCCCCEEEecccCCCCCCCCCcEEE
Confidence 46889999999999999887653 46677887 88999999999999999999999999999999987643245679999
Q ss_pred EeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCC
Q psy5224 1000 IDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNN 1079 (1178)
Q Consensus 1000 IDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1178)
|||||||+||++|.|.||++||+.++|+|++|+||+|.+||+|+|.+|.|+|+|++|+++++.+++++..+.++.+....
T Consensus 80 IDPIDGT~nf~~g~p~~~vsial~~~g~p~~gvV~~P~~~~~~~a~~G~Ga~~ng~~l~~~~~~~~~~~~i~~~~~~~~~ 159 (244)
T cd01639 80 IDPLDGTTNFVHGFPHFAVSIALAVKGEPVVGVVYDPIRNELFTAVRGQGAFLNGRRIRVSGRKELKDALVATGFPYDRG 159 (244)
T ss_pred EecccChhHHhcCCCcEEEEEEEEECCEEEEEEEEeCCCCcEEEEECCccccCCCEEeecCCCCCHHHcEEEeecCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988888888887776544221
Q ss_pred -CChHHHHHHHHHHhh-cCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCc
Q psy5224 1080 -INSEEYAKIFQIITK-CKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD 1157 (1178)
Q Consensus 1080 -~~~~~~~~~~~~~~~-~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~ 1157 (1178)
..+...+...+...+ ..++|+.||+++++|+||+|++|+|++.+.++||+||+.+|++|+||.++|.+|+|..++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~l~~~~va~G~~d~~~~~~~~~wD~aAg~~il~eaGG~v~d~~G~~~~~~~~~ 239 (244)
T cd01639 160 DNFDRYLNNFAKLLAKAVRGVRRLGSAALDLAYVAAGRLDGYWERGLKPWDVAAGALIVREAGGLVTDFDGGPFDLMSGN 239 (244)
T ss_pred cchHHHHHHHHHHHHhhcCcccchhHHHHHHHHHHhcCeEEEEECCCCHHHHHHHHHHHHhCCCEEECCCCCccccCCCc
Confidence 122222333344444 678999999999999999999999999999999999999999999999999999998777777
Q ss_pred EEEeC
Q psy5224 1158 IVAGN 1162 (1178)
Q Consensus 1158 iva~~ 1162 (1178)
++|+|
T Consensus 240 ~~a~~ 244 (244)
T cd01639 240 ILAGN 244 (244)
T ss_pred EEEeC
Confidence 87765
|
A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria. |
| >PRK12676 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=406.59 Aligned_cols=250 Identities=26% Similarity=0.333 Sum_probs=214.5
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceEEE-eccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccE
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLRFE-EKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENI 997 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~-~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~ 997 (1178)
.++++.+.+++++|++.+++.+++.+...+. +|+++|+||++|+++|+.|++.|++.+|++.|+|||.+...+.+++++
T Consensus 4 ~~~l~~a~~~a~~a~~~l~~~~~~~~~~~~~~~~~~~d~vt~aD~~ae~~i~~~L~~~~P~~~il~EE~~~~~~~~~~~~ 83 (263)
T PRK12676 4 MEWLEICDDMAKEVEKAIMPLFGTPDAGETVGMGADGTPTKLIDKVAEDIILEVLKPLGRCVNIISEELGEIVGNGPEYT 83 (263)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccceeEeecCCCCEeeHHHHHHHHHHHHHHHHhCCCCEEEecccCCcCCCCCCeE
Confidence 4578899999999999999887654433443 456889999999999999999999999999999999876434456789
Q ss_pred EEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCC
Q psy5224 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK 1077 (1178)
Q Consensus 998 wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1178)
|+|||||||+||++|.|.||++||+.++|+|++|+||+|.+||+|+|.+|+|+++|++|+++++.+++++..+......
T Consensus 84 WvIDPiDGT~nfv~g~p~~~vsial~~~g~p~~gvV~~P~~~e~~~A~~g~ga~~ng~~i~~~~~~~~~~~~~~~~~~~- 162 (263)
T PRK12676 84 VVLDPLDGTYNAINGIPFYAISIAVFKGGKPVYGYVYNLATGDFYEAIPGKGAYLNGKPIKVSKTSELNESAVSIYGYR- 162 (263)
T ss_pred EEEeccCCchHHhcCCCceEEEEEEEECCeEEEEEEEecCCCCEEEEECCCcccCCCccccccCCCCccceEEEEEecc-
Confidence 9999999999999999999999999999999999999999999999999999999999999888777777776654321
Q ss_pred CCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC--CCccchHHHHHHHHHcCCcccccCCCCCCCC-
Q psy5224 1078 NNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG--LKPWNIAAGSLLIIESGGIISNFKGEKNYLY- 1154 (1178)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~--~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~- 1154 (1178)
... ....+..++..++|+.||+++++|+||+|++|+|++.+ .++||+|||.+|++|+||.++|.+|+|+.++
T Consensus 163 --~~~---~~~~~~~~~~~~~r~~Gs~~l~~~~vA~G~~d~~v~~~~~~~~wD~aAg~~i~~eaGg~v~d~~G~~~~~~~ 237 (263)
T PRK12676 163 --RGK---ERTVKLGRKVRRVRILGAIALELCYVASGRLDAFVDVRNYLRVTDIAAGKLICEEAGGIVTDEDGNELKLPL 237 (263)
T ss_pred --cch---HHHHHHHhhcCceEecCHHHHHHHHHhcCccceeeeccCCCchHHHHHHHHHHHHcCCEEECCCCCcccCcc
Confidence 111 22334445667899999999999999999999999987 7899999999999999999999999997553
Q ss_pred ----CCcEEEeChH-HHHHHHHHHh
Q psy5224 1155 ----TGDIVAGNQK-IFSQIISLIN 1174 (1178)
Q Consensus 1155 ----~~~iva~~~~-l~~~l~~~l~ 1174 (1178)
++.++|++++ +|+++++.++
T Consensus 238 ~~~~~~~~vaa~~~~l~~~l~~~l~ 262 (263)
T PRK12676 238 NVTERTNLIAANGEELHKKILELLE 262 (263)
T ss_pred cccccceEEEECCHHHHHHHHHHhc
Confidence 5568899888 9999998775
|
|
| >CHL00049 ndhB NADH dehydrogenase subunit 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-44 Score=429.45 Aligned_cols=311 Identities=35% Similarity=0.637 Sum_probs=265.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhhHHHHh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT-GTLELQSIFNVI 669 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~-gs~~~~~~~~~~ 669 (1178)
+.+.+..|+|++.+|+++|++++++|.++..+++++++.|+++||+++|.+||.++++|+.++|..+ |++|++++.+..
T Consensus 123 g~~~~~~s~dl~~l~v~~El~si~~y~Li~~~~~~~~~~~aa~KY~i~~~~gs~~lL~gi~~ly~~~~g~~~~~~l~~~~ 202 (494)
T CHL00049 123 GGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGL 202 (494)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHH
Confidence 3445667899999999999999999999976666666899999999999999999999999999876 699998876533
Q ss_pred hhccCC-hhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNIN-CSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~-~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
...+.. .....++..++++|+++|+|++|||.|+||+|+++|+++++++++++|+++++++.|+.....+.....++.+
T Consensus 203 ~~~~~~~~~~~~~~~~l~~~g~~~K~gl~PfH~WlPdvy~~ap~~vsalls~~~K~~~~~~l~r~~~~~~~~~~~~~~~~ 282 (494)
T CHL00049 203 INTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLL 282 (494)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhhccccccChhhhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHH
Confidence 211111 1223445677889999999999999999999999999999999999999999998887654443333456678
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.+++++|+++|++.|++|+|+||++|||||+|+||+++++...+.. .+..++++|++.|.+++.++|...+.
T Consensus 283 l~~l~~ls~~~G~l~al~Q~dlKrlLAYSSIs~~G~illgi~~~~~~-------~g~~~~l~y~~~y~~~~~~lF~~~~~ 355 (494)
T CHL00049 283 LEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN-------DGYASMITYMLFYIFMNLGTFACIVL 355 (494)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCCch-------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999998753321 15568899999999999999988887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGR 907 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r 907 (1178)
+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++.+.++.+.+++..+.+++|+++++ |.|
T Consensus 356 ~~~~~--~~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~GiPP~~GF~~K~~i~~~~~~~~~~~l~~i~ll~S~ls~~yylr 433 (494)
T CHL00049 356 FGLRT--GTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLK 433 (494)
T ss_pred HHhcc--CcccHHHhcChhhcChHHHHHHHHHHHHHhccchhchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 76654 667899999999999999999999999999999999999999999999998888888888899999988 888
Q ss_pred hcc
Q psy5224 908 IIK 910 (1178)
Q Consensus 908 ~~~ 910 (1178)
+++
T Consensus 434 i~~ 436 (494)
T CHL00049 434 IIK 436 (494)
T ss_pred HHH
Confidence 873
|
|
| >PRK05777 NADH:ubiquinone oxidoreductase subunit N; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=427.85 Aligned_cols=310 Identities=45% Similarity=0.824 Sum_probs=267.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|+++|++++++|.++..+++++++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 115 g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~s~ea~~kYfi~~~~~s~~lL~g~~~ly~~tGs~~~~~~~~~~~ 194 (476)
T PRK05777 115 GMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALA 194 (476)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHh
Confidence 45666789999999999999999999999877777678999999999999999999999999999999999988764322
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
...........+..+++.|+++|+|++|||.|+||+|+++|+++++++++++|+++++++.|+.....++....+...+.
T Consensus 195 ~~~~~~~~~~~~~~li~~gl~~K~g~~PfH~Wlpdvy~~ap~~v~a~ls~~~K~~~~~~l~r~~~~~~~~~~~~~~~~l~ 274 (476)
T PRK05777 195 DGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLA 274 (476)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHhhhhhcCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 22112223344567788899999999999999999999999999999999999999998888765433322234567888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
+++++|+++|++.|++|+|+||++|||||+|+||+++++..... .+..++++|++.|.+++..+|...+.++
T Consensus 275 ~~~~ls~~~g~~~al~Q~~~KrlLAySSI~~~G~il~~l~~~~~--------~~~~~~~~y~~~y~~~~~~lF~~~~~~~ 346 (476)
T PRK05777 275 IIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTA--------EGYSAVLFYLLAYLFMTLGAFGVISLLR 346 (476)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998865432 3566889999999999999999888776
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++. ++++++++++|+.+++|..+..+.++.+|++|+||+.||++|++++++.++.+.+++.++++++|+++++ |.|++
T Consensus 347 ~~~-~~~~~l~~l~gl~~~~p~~~~~~~i~~lsl~GiPP~~GF~~K~~i~~~~~~~~~~~l~~~~~l~s~is~~yylri~ 425 (476)
T PRK05777 347 RKG-GEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVI 425 (476)
T ss_pred cCC-CCcCCHHHHhChhhhChHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 2467889999999999999999999999999999999999999999999998878888888889999998 89987
|
|
| >cd01643 Bacterial_IMPase_like_2 Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=398.55 Aligned_cols=228 Identities=29% Similarity=0.377 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEEEec
Q psy5224 923 VEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDP 1002 (1178)
Q Consensus 923 ~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wvIDP 1002 (1178)
+.+.+++++|++.+++.+++ ..++++|+++|+||++|+++|+.|++.|++.+|++.|+|||++.. ..+++++|+|||
T Consensus 2 ~~a~~~a~~ag~~~~~~~~~--~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~P~~~i~gEE~~~~-~~~~~~~WiIDP 78 (242)
T cd01643 2 SLAEAIAQEAGDRALADFGN--SLSAETKADGSLVTAADRWVEQLIRARLAAQFPDDGVLGEEGGGI-FPSSGWYWVIDP 78 (242)
T ss_pred HHHHHHHHHHHHHHHHHhcc--CcceeecCCCCcccHHHHHHHHHHHHHHHHHCCCCeEEecCCCCC-CCCCCCEEEEeC
Confidence 57889999999999988765 467788999999999999999999999999999999999998763 334678999999
Q ss_pred cCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCCh
Q psy5224 1003 LDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINS 1082 (1178)
Q Consensus 1003 IDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1082 (1178)
||||+||++|.|.||++||+.++|+|++|+|++|.++++|+|.+|.|+++|++|++++...++++..+.++.+....
T Consensus 79 IDGT~nF~~g~p~~~vsial~~~g~pv~GvV~~P~~~~~~~A~~G~ga~~ng~~i~~s~~~~~~~~~v~~~~~~~~~--- 155 (242)
T cd01643 79 IDGTTNFARGIPIWAISIALLYRGEPVFGVIALPALNQTFVAFKGGGAFLNGKPLALHPPLQLPDCNVGFNRSSRAS--- 155 (242)
T ss_pred ccChHHHhcCCCceEEEEEEEECCEEEEEEEecCCCCCEEEEEcCcceeECCeeccCCCCCChhhcEEEecCccccc---
Confidence 99999999999999999999999999999999999999999999999999999999988888888888776543221
Q ss_pred HHHHHHHH-HHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCc
Q psy5224 1083 EEYAKIFQ-IITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD 1157 (1178)
Q Consensus 1083 ~~~~~~~~-~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~ 1157 (1178)
.. ..... ......++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|++|+|..+.+++
T Consensus 156 ~~-~~~~~~~~~~~~~~r~~Gs~al~~~~vA~G~~d~~v~~~~~~wD~aAg~~i~~eaGG~v~d~~G~~~~~~~~~ 230 (242)
T cd01643 156 AR-AVLRVILRRFPGKIRMLGSASLNLASVAAGQTLGYVEATPKIWDIAAAWVILREAGGSWTILDEEPAFLQTKD 230 (242)
T ss_pred hH-HHHHHHHHHhcCeEEeccHHHHHHHHHHhCCceEEEECCCCcHHHHHHHHHHHHCCCeEECCCCCccCccccc
Confidence 11 11111 2234568999999999999999999999999999999999999999999999999999997766544
|
These enzymes may dephosphorylate inositol monophosphate or similar substrates. |
| >COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=391.16 Aligned_cols=298 Identities=27% Similarity=0.435 Sum_probs=268.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccchhhHHHH
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG--TLELQSIFNV 668 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~g--s~~~~~~~~~ 668 (1178)
+.+-...+.|++.+|++||+..++.|.+|+.|+.+ ++..|+.|+|+++.+||.++|++..-.|..+| |+|+.++.+
T Consensus 122 ~~iGvF~a~DllLFyvFwE~~LIPmy~iIgiwGg~-~R~yAa~KFflYT~~gsl~mLla~~~~~~~~g~~TFd~~~l~~- 199 (497)
T COG1008 122 GVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGK-RRIYAATKFFLYTLLGSLFMLLAFLYLYFLTGSPTFDILELLA- 199 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHh-
Confidence 45566788999999999999999999999999886 48999999999999999999999999999999 777766644
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
.+.+...+.+..+.+++||++|++++|+|.|+||+|.++|++++.+++++ .|.+++ .+.|+..+.+|+....+.+
T Consensus 200 ---~~~~~~~q~~L~~~f~iaFaVK~P~~P~HTWLPDAh~eApt~gSViLaGiLlKmG~Y-GllRf~L~lfP~as~~fap 275 (497)
T COG1008 200 ---LNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVILAGILLKMGGY-GLLRFSLPLFPDASAYFAP 275 (497)
T ss_pred ---ccCChHHHHHHHHHHHHHHHhccCCccccccCChhhccCCCcHHHHHHHHHHHhcch-HhhhhccccCCchHHHHHH
Confidence 23566677788888999999999999999999999999999999999988 555555 5569988888887777889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++++++|++.|++|+|+||++||||++|||++.+|+.+.+. .+..++.+++++|.+....+|++++
T Consensus 276 ~l~~L~visIiY~al~A~aQ~diKrliAYSSiSHMGfV~lgifs~~~--------~g~~GAv~QM~sHGlisa~LFl~vG 347 (497)
T COG1008 276 LLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLGIFSFNE--------LGVSGAVFQMLSHGLISAALFLLVG 347 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHhhH--------HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987664 5788999999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHhh
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAKG 905 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~~ 905 (1178)
.+++|. +++++++++|+.+++|+.+..+.++.++..|+|.+.||++|++++.+.++..+ +...+...+.++++.|
T Consensus 348 ~iy~r~--hTr~i~~~GGl~~~mP~~aa~~~~~~mAs~glPG~sgFvgEFlil~G~f~~~~-~~~~la~~g~iltA~Y 422 (497)
T COG1008 348 VLYERT--HTRDIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFP-WVAFLAAFGLILTAVY 422 (497)
T ss_pred HHHHhh--cchhHHHhCCHHhhChHHHHHHHHHHHHhcCCCccchHHHHHHHHhhhhhhhH-HHHHHHHHHHHHHHHH
Confidence 999998 99999999999999999999999999999999999999999999999988875 6666677778888774
|
|
| >MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=416.71 Aligned_cols=291 Identities=37% Similarity=0.691 Sum_probs=255.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+.+..|+|++.+|+++|++++++|.++..+++++++.|+++||+++|.+||.++|+|+.++|..+|+++++++.....
T Consensus 109 g~l~l~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~s~eAa~KYfl~~~~~S~~lL~gi~lly~~tGs~~~~~l~~~~~ 188 (460)
T MTH00199 109 GSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSILT 188 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45667889999999999999999999999887777778999999999999999999999999999999999987643211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
...+..++++|+++|+|++|||.|+||+|+++|+++++++++++|.+++..+.|.. + +.+.+.
T Consensus 189 --------~~~~~~lil~g~~~Kl~~~PfH~WlPdvy~~apt~~sa~Ls~~~Ki~~~~il~~l~----~-----~~~~l~ 251 (460)
T MTH00199 189 --------GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIG----P-----VTNVVL 251 (460)
T ss_pred --------HHHHHHHHHHHHHHHHhhccccccHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHh----h-----HHHHHH
Confidence 12344678889999999999999999999999999999999999999998875542 1 234677
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
+++++|+++|++.|++|+|+||++|||||+|+||+++++.+.+. .+..++++|++.|.+++.++|.++...+
T Consensus 252 ~l~~lS~i~G~l~al~Q~diKRlLAYSSIsh~G~illgl~~~~~--------~g~~~~l~y~i~y~l~~~~~F~~i~~l~ 323 (460)
T MTH00199 252 ICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSF--------ESIQASLIYMIIYVIMSICSFSIILSLK 323 (460)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHHHcch--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999876432 3567889999999999999998877665
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
.+ ++++++++|+.+++|..+..+.++++|++|+||+.||++|++++.+.++.+.+++.++.+++|+++++ |.|++
T Consensus 324 ~~----~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~K~~il~~~~~~~~~~l~~i~~l~Svis~~Yylri~ 399 (460)
T MTH00199 324 LT----KGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVV 399 (460)
T ss_pred hc----hhhHHHHhChhhhCHHHHHHHHHHHHHHhCcCccccHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 35688899999999999999999999999999999999999999999998888888888889999999 89997
Q ss_pred c
Q psy5224 910 K 910 (1178)
Q Consensus 910 ~ 910 (1178)
+
T Consensus 400 ~ 400 (460)
T MTH00199 400 Q 400 (460)
T ss_pred H
Confidence 4
|
|
| >cd01517 PAP_phosphatase PAP-phosphatase_like domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=404.79 Aligned_cols=246 Identities=21% Similarity=0.289 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHHHhcccccc-ceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEEE
Q psy5224 922 IVEAIKAARKSALIINRGSLELE-NLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWII 1000 (1178)
Q Consensus 922 l~~a~~aa~~a~~~~~~~~~~~~-~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wvI 1000 (1178)
++.+.+++++|++.+++.+++.+ ...+++|+++|+||++|+++|+.|++.|++.||++.|+|||.+.. .+++|+|
T Consensus 2 ~~~a~~~a~~ag~~i~~~~~~~~~~~~~~~k~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~----~~~~WiI 77 (274)
T cd01517 2 LEVAILAVRAAASLTLPVFRNLGAGDVVWKKSDKSPVTVADYGAQALITAALARLFPSDPIVGEEDSAA----LGRFWVL 77 (274)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccccceeecCCCCCCcHHHHHHHHHHHHHHHHHCCCCcEEeCCccCC----CCcEEEE
Confidence 46789999999999999876543 355678889999999999999999999999999999999998652 2678999
Q ss_pred eccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecC-------CCcEEEEecCCceEEcCeecccCCCC---CCC---C
Q psy5224 1001 DPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI-------RNDLFTAIKGCGAYLNEKRIRVNKRN---KIN---D 1067 (1178)
Q Consensus 1001 DPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~-------~~~~~~a~~g~ga~~n~~~~~~~~~~---~~~---~ 1067 (1178)
||||||+||++|. .|||+||+.++|+|++||||+|. ++|+|+|.+|+|+++|++++++.++. +.+ .
T Consensus 78 DPIDGT~nfv~g~-~~~vsIal~~~g~pv~GvI~~P~~~~~~~~~~~~~~A~~G~Ga~~n~~~~~~~~~~~~~~~~~~~~ 156 (274)
T cd01517 78 DPIDGTKGFLRGD-QFAVALALIEDGEVVLGVIGCPNLPLDDGGGGDLFSAVRGQGAWLRPLDGSSLQPLSVRQLTNAAR 156 (274)
T ss_pred cCCcCchhhhcCC-ceEEEEEEEECCEEEEEEEeCCCccccCCCCCcEEEEEcCcceEEecCCCCcccccccccCCCccc
Confidence 9999999999999 99999999999999999999999 99999999999999999877644331 111 1
Q ss_pred cEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec------CCCccchHHHHHHHHHcCC
Q psy5224 1068 ALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK------GLKPWNIAAGSLLIIESGG 1141 (1178)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~------~~~~wD~aA~~~i~~eaGg 1141 (1178)
.......... ... .......+...+..++|+.|| ++++|+||+|++|+|++. +.++||+|||.+|++||||
T Consensus 157 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~r~~Gs-al~~~~VA~G~~d~~~~~~~~~~~~~~~WD~aAg~li~~EAGG 233 (274)
T cd01517 157 ASFCESVESA-HSS-HRLQAAIKALGGTPQPVRLDS-QAKYAAVARGAADFYLRLPLSMSYREKIWDHAAGVLIVEEAGG 233 (274)
T ss_pred ceeEeeeccc-cCc-HHHHHHHHHcCCCCCceEecc-HHhHHhhhcCCccEEEEccccccCCCccchhHHHHHHHHHcCC
Confidence 1111111111 111 112222233445677899999 999999999999999998 7999999999999999999
Q ss_pred cccccCCCCCCCC-------CCcEEEeChHHHHHHHHHHhh
Q psy5224 1142 IISNFKGEKNYLY-------TGDIVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1142 ~v~d~~G~~~~~~-------~~~iva~~~~l~~~l~~~l~~ 1175 (1178)
.++|.+|+|+.++ +++++|+|+++|+++++.+++
T Consensus 234 ~vtd~~G~~~~~~~~~~~~~~~~~iaa~~~~~~~~~~~l~~ 274 (274)
T cd01517 234 KVTDADGKPLDFGKGRKLLNNGGLIAAPGEIHEQVLEALRE 274 (274)
T ss_pred EEECCCCCcccCCCCcccccCCcEEEECchhHHHHHHHhhC
Confidence 9999999996554 357999999999999998864
|
PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set. |
| >PF00459 Inositol_P: Inositol monophosphatase family; InterPro: IPR000760 It has been shown that several proteins share two sequence motifs [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=405.89 Aligned_cols=259 Identities=30% Similarity=0.531 Sum_probs=217.3
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEe-ccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC----C
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEE-KKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN----F 992 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~-K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~----~ 992 (1178)
+.++++.+++++++|++.+++.+++....+.+. |+++|+||++|+++|+.+.+.|++.+|++.|+|||++.... .
T Consensus 2 ~~~~~~~a~~~a~~a~~~i~~~~~~~~~~~~k~~~~~~d~vt~aD~~~e~~i~~~L~~~~P~~~ii~EE~~~~~~~~~~~ 81 (270)
T PF00459_consen 2 LQEILKIAIRAAREAGEIIRERFRRQLSVEEKGKKSDGDFVTEADLAAEKLIIEALRKAFPDHPIIGEEDGDSDPNDELP 81 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCHEEEEEESSTTEEEHHHHHHHHHHHHHHHHHHSTTSEEEETTTEEETSGTTTS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCCceeeeccCCCCChHHHHHHHHHHHHHHHHHhhCCcceecccccccccccccCC
Confidence 357889999999999999999886433333332 46899999999999999999999999999999999876554 4
Q ss_pred CCccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEe
Q psy5224 993 ENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGT 1072 (1178)
Q Consensus 993 ~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~ 1072 (1178)
+++++|+|||||||+||++|.|.||+++|++++|+|++|||++|.+|++|+|.+|+|+++|++++++++..+.++.....
T Consensus 82 ~~~~~wviDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvi~~P~~~~~~~a~~g~Ga~~~~~~~~~~~~~~~~~~~~~~ 161 (270)
T PF00459_consen 82 SDEYTWVIDPIDGTRNFVRGLPEFAISIALLVNGEPVAGVIYDPFLGELYYASRGQGAFLNGRRIRVSKAPPLDNASSVA 161 (270)
T ss_dssp SSCEEEEEEEEETHHHHHHTSSG-EEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEEEEESCTSSGGGSEEEE
T ss_pred CCceEEEecccccchhhhhhhhHHHHHHHHHHhhhhhhheeecccccceeeeecCCcceecCeeeeeeeccccccceeee
Confidence 56699999999999999999999999999999999999999999999999999999999999999988877555555544
Q ss_pred ccCCCCCCChHHHHHHHHHHhhcC--CccccchHHHhHHHHHccccCEEEecC-CCccchHHHHHHHHHcCCcccccCCC
Q psy5224 1073 DFSFKNNINSEEYAKIFQIITKCK--NLRNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGIISNFKGE 1149 (1178)
Q Consensus 1073 ~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~Gs~~~~~~~va~G~~d~~~~~~-~~~wD~aA~~~i~~eaGg~v~d~~G~ 1149 (1178)
....+................... ++|+.||+++++|+||+|++|+|++.+ .++||+|||.+|++|+||.++|.+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~~wD~aA~~~i~~eaGg~vtd~~G~ 241 (270)
T PF00459_consen 162 SFSYSSQPDIPDASLIRKLLSLVSSQGVRSMGSSALDLALVAEGRADAYVSLSPLKPWDIAAGMLILEEAGGIVTDLDGK 241 (270)
T ss_dssp EESSSSTCHHHHHHHHHHHHHTSSEEEEEBESCHHHHHHHHHTTSSSEEEEESEEBHHHHHHHHHHHHHTTEEEEETTSS
T ss_pred eecccccccchhhHHHHHHHhhccccccccccccccceeEEecCcceEEEEeCCCchhhhhHHHHHHHHCCCEEECCCCC
Confidence 333333322222222333333333 479999999999999999999999999 99999999999999999999999999
Q ss_pred CCCCCCCcEEEeC-hHHHHHHHHHHhhh
Q psy5224 1150 KNYLYTGDIVAGN-QKIFSQIISLINLN 1176 (1178)
Q Consensus 1150 ~~~~~~~~iva~~-~~l~~~l~~~l~~~ 1176 (1178)
|..++++++++++ |++|+++++.++++
T Consensus 242 ~~~~~~~~~i~a~~~~l~~~ll~~~~~~ 269 (270)
T PF00459_consen 242 PLDYNSGGLIAASPPELHEKLLALLREK 269 (270)
T ss_dssp CSSTTSSEEEEESSHHHHHHHHHHCCHH
T ss_pred cccCCCCeEEEECCHHHHHHHHHHHHhh
Confidence 9988888888766 99999999999875
|
Two of these proteins, vertebrate and plant inositol monophosphatase (3.1.3.25 from EC), and vertebrate inositol polyphosphate 1-phosphatase (3.1.3.57 from EC), are enzymes of the inositol phosphate second messenger signalling pathway, and share similar enzyme activity. Both enzymes exhibit an absolute requirement for metal ions (Mg2+ is preferred), and their amino acid sequences contain a number of conserved motifs, which are also shared by several other proteins related to MPTASE (including products of fungal QaX and qutG, bacterial suhB and cysQ, and yeast hal2) []. The function of the other proteins is not yet clear, but it is suggested that they may act by enhancing the synthesis or degradation of phosphorylated messenger molecules []. Structural analysis of these proteins has revealed a common core of 155 residues, which includes residues essential for metal binding and catalysis. An interesting property of the enzymes of this family is their sensitivity to Li+. The targets and mechanism of action of Li+ are unknown, but overactive inositol phosphate signalling may account for symptoms of manic depression [].; GO: 0004437 inositol or phosphatidylinositol phosphatase activity; PDB: 1IMF_A 1IMA_A 1IMB_A 1IMD_A 1IMC_A 1IME_A 1AWB_A 2HHM_B 2QFL_A 1INP_A .... |
| >PRK08377 NADH dehydrogenase subunit N; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-43 Score=419.68 Aligned_cols=306 Identities=29% Similarity=0.442 Sum_probs=262.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|++||++++++|.++..+++ +++.|+++||+++|.+||.++++|+.++|..+|++|++++.+..
T Consensus 120 g~~g~~~s~dl~~~~v~~El~~l~~~~Li~~~~~-~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gs~~~~~l~~~~- 197 (494)
T PRK08377 120 GATGMIATGDIFNLFVFMEITAITAYALTAYNKT-GEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLA- 197 (494)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHh-
Confidence 3455678999999999999999999999976554 46899999999999999999999999999999999998775421
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP-LVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~-~~~~~~~~l 749 (1178)
...++....++..++++|+++|+|++|||.|+||+|+++|+++++++++++|+.+.+.+.|+....... .......++
T Consensus 198 -~~~~~~~~~~~~~l~~~g~~~K~g~~PfH~Wlpda~~~ap~~vsalls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~~l 276 (494)
T PRK08377 198 -GTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLV 276 (494)
T ss_pred -cccCchHHHHHHHHHHHHHHHHHhhcccceechhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHHH
Confidence 112222344566778889999999999999999999999999999999999999999998886543321 112234577
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.++|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|...+.+
T Consensus 277 ~~l~~ls~l~g~~~al~Q~dlKrllAYSSIs~~G~ill~i~~~~~--------~~~~~~~~~~~~h~~~k~~lFl~~g~~ 348 (494)
T PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ--------AGVDAGVFHMINHAIVKALLFLAVGYV 348 (494)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH--------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999865432 355788999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++++..+.+.+++.++.+++|++++. |.|+
T Consensus 349 ~~~~--~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~i~~~~~~~~~~~l~~i~ll~s~is~~yylr~ 426 (494)
T PRK08377 349 GITL--GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426 (494)
T ss_pred HHHc--CCccHHHhCChhhhChHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7765 678899999999999999999999999999999999999999999999998877777788889999999 7888
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 427 ~ 427 (494)
T PRK08377 427 I 427 (494)
T ss_pred H
Confidence 6
|
|
| >PRK12667 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=424.84 Aligned_cols=310 Identities=26% Similarity=0.377 Sum_probs=263.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-+......++|++.+|++||+++++++.++..+++++++.|+++||+++|.+||.++++|+.++|..+|++|++++.+..
T Consensus 124 ~g~~g~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gs~~~~~l~~~~ 203 (520)
T PRK12667 124 AGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKI 203 (520)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHh
Confidence 34566788999999999999999999999987777777899999999999999999999999999999999998875432
Q ss_pred hhc---------cCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy5224 670 KLN---------NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP 740 (1178)
Q Consensus 670 ~~~---------~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~ 740 (1178)
... +........+..++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~~~K~glfPfH~Wlpda~~~apt~vsalls~~~~k~g~y~l~r~~~~~~~~ 283 (520)
T PRK12667 204 RGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGI 283 (520)
T ss_pred hhcccccccccccccchHHHHHHHHHHHHHHHHHhhcchHhhhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 100 00011223456678889999999999999999999999999999999876556666667875443332
Q ss_pred ------hhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHH
Q psy5224 741 ------LVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIIT 814 (1178)
Q Consensus 741 ------~~~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 814 (1178)
....+..++.++|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++
T Consensus 284 ~~~~~~~~~~~~~~l~~l~~~s~l~g~l~al~Q~dlKrlLAYSSIs~~G~il~~l~~~~~--------~~~~~~l~~~i~ 355 (520)
T PRK12667 284 SPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQ--------LGLAAALFHIIN 355 (520)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHH
Confidence 123356778889999999999999999999999999999999999999865432 356788999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHH
Q psy5224 815 YIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLL 894 (1178)
Q Consensus 815 ~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l 894 (1178)
|.+.+..+|+..+.+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++||+++++.++.+.+++..+
T Consensus 356 h~~~k~~lFl~~G~i~~~~--g~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPP~~GF~~K~~i~~~~~~~~~~~~~~i 433 (520)
T PRK12667 356 HAIAKSLLFLASGVFIHAA--GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALV 433 (520)
T ss_pred HHHHHHHHHHHHHHHHHHh--CCeeHHHhCChhhhChHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHcCcHHHHHH
Confidence 9999999999999887775 78899999999999999999999999999999999999999999999999887777778
Q ss_pred HHHHHHHHHh-hhhhc
Q psy5224 895 IIMCSLIGAK-GGRII 909 (1178)
Q Consensus 895 ~ll~s~~~~~-~~r~~ 909 (1178)
++++|++++. |.|++
T Consensus 434 ~~~~s~ls~~yylr~~ 449 (520)
T PRK12667 434 LLIASAISLVGYFRAW 449 (520)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8889999988 78886
|
|
| >cd01515 Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-44 Score=395.52 Aligned_cols=246 Identities=28% Similarity=0.377 Sum_probs=209.8
Q ss_pred cHHHHHHHHHHHHHHHHhccccccce-EEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-CCCCccEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENL-RFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT-NFENENIW 998 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~-~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~-~~~~~~~w 998 (1178)
+++.+.+++++|++.+++.+++.... .+++|+++|+||++|+++|+.|++.|++.+ ++.|+|||.+... ..+++++|
T Consensus 1 ~~~~a~~~a~~a~~~~~~~~~~~~~~~~~~~k~~~d~vt~aD~~ae~~i~~~l~~~~-~~~i~~EE~~~~~~~~~~~~~W 79 (257)
T cd01515 1 WLEIARNIAKEIEKAIKPLFGTEDASEVVKIGADGTPTKLIDKVAEDAAIEILKKLG-SVNIVSEEIGVIDNGDEPEYTV 79 (257)
T ss_pred ChHHHHHHHHHHHHHHHHhhCCccccceeeecCCCCcchHHHHHHHHHHHHHHHhCC-CceEEecCCCccccCCCCCeEE
Confidence 36789999999999999887653323 345778999999999999999999999999 9999999987543 22567899
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCe--EEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQ--ITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~--pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
+|||||||+||++|.|.||++||+.++|+ |++|+||+|.+||+|+|.+|+|++.|++|++++..+++++..+......
T Consensus 80 vIDPIDGT~nfv~g~p~~~isial~~~g~~~p~~gvv~~P~~~~~~~a~~g~Ga~~ng~~i~~~~~~~~~~~~v~~~~~~ 159 (257)
T cd01515 80 VLDPLDGTYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAIKGKGAYLNGKRIKVSDFSSLKSISVSYYIYG 159 (257)
T ss_pred EEeCcCChhHHhcCCCceEEEEEEEeCCCCCeEEEEEEecCCCCeEEEEcCCceEECCeecccCCCCcccceEEEEecCC
Confidence 99999999999999999999999999999 9999999999999999999999999999999888777777777654221
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC--CCccchHHHHHHHHHcCCcccccCCCCCCC-
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG--LKPWNIAAGSLLIIESGGIISNFKGEKNYL- 1153 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~--~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~- 1153 (1178)
. ... ...+...+..++|+.||+++++|+||+|++|+|++.+ .++||+|||.+|++|+||.++|.+|+|+.+
T Consensus 160 ~---~~~---~~~~~~~~~~~~r~~Gs~~l~~~~vA~G~~d~~v~~~~~~~~wD~aAg~~i~~eaGG~v~d~~G~~~~~~ 233 (257)
T cd01515 160 K---NHD---RTFKICRKVRRVRIFGSVALELCYVASGALDAFVDVRENLRLVDIAAGYLIAEEAGGIVTDENGKELKLK 233 (257)
T ss_pred c---chH---HHHHHHhhcCceeecCHHHHHHHHHhcCCccEEEEcCCCCcchhHHHHHHHHHHcCCEEECCCCCccccc
Confidence 1 111 1333445567899999999999999999999999964 789999999999999999999999999643
Q ss_pred ----CCCcEEEeChHHHHHHHHHH
Q psy5224 1154 ----YTGDIVAGNQKIFSQIISLI 1173 (1178)
Q Consensus 1154 ----~~~~iva~~~~l~~~l~~~l 1173 (1178)
+++.++|+|+++|+++++.+
T Consensus 234 ~~~~~~~~~va~~~~~~~~~l~~l 257 (257)
T cd01515 234 LNVTERVNIIAANSELHKKLLELL 257 (257)
T ss_pred ccccccceEEEECHHHHHHHHhhC
Confidence 34568999999999998753
|
These are Mg++ dependent phosphatases. Members in this family may have both fructose-1,6-bisphosphatase and inositol-monophosphatase activity. In hyperthermophilic archaea, inositol monophosphatase is thought to play a role in the biosynthesis of di-myo-inositol-1,1'-phosphate, an osmolyte unique to hyperthermophiles. |
| >TIGR00944 2a6301s04 Multicomponent K+:H+antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=414.00 Aligned_cols=307 Identities=22% Similarity=0.400 Sum_probs=259.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||++++++|.++..++ ++++.|+++||++++.+||.++++|+.++|..+|++|+.++.....
T Consensus 117 g~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~g~~~~~~i~~~~~ 195 (463)
T TIGR00944 117 GLNGAFLTGDLFNLFVFFEMMLAASYGLLVHGS-TKIQLKEGLKYIAVNLVSSALFVIGVSLLYGVAGTLNMADLSTKLA 195 (463)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHHh
Confidence 455667899999999999999999999997654 4568999999999999999999999999999999999988754321
Q ss_pred h-ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 671 L-NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 671 ~-~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. +..+.+.......++++|+++|+|++|||.|+||+|+++|+++++++++ .+|.+++. +.|+.....+.....++.+
T Consensus 196 ~~~~~~~~~~~~~~~l~~~g~~~K~~~~PfH~WlP~a~~~ap~~~s~lls~~~~K~g~y~-lir~~~~~~~~~~~~~~~~ 274 (463)
T TIGR00944 196 ALEPRSRGLVEMGSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVFGALLTKVGIYA-IIRLHLLVFGTAAGFGHEW 274 (463)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCChHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHH
Confidence 1 1112223345567888999999999999999999999999999999954 57765555 6677654433322233567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|...+.
T Consensus 275 l~~lg~~s~~~g~~~al~Q~dlKrllAYSSIs~~G~il~~l~~~~~--------~~~~~~~~~~i~h~~~k~~lF~~~g~ 346 (463)
T TIGR00944 275 LVTLAMLTIIFGGIGVLAYQNMGKIAGYNVLVAVGVILAGVALGTD--------GMLAGAIYYLVHDMLTKGALFLLIGL 346 (463)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999865432 35578899999999999999999998
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGR 907 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r 907 (1178)
+.+++ +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.+++++++.+.+.+..+++++++.+.+ |.|
T Consensus 347 i~~~~--~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~l~~s~~~~~~~lr 424 (463)
T TIGR00944 347 VIRGT--GTATLEAYGGLIKRYPVLGWCFFICALSLAGIPPLSGFIGKFAIISGLFDMGDWTYVTLLLLSSLAVLYSVNR 424 (463)
T ss_pred HHhcc--CcccHHHccCchhhhHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 88776 788999999999999999999999999999999999999999999999999888777778888888888 778
Q ss_pred hc
Q psy5224 908 II 909 (1178)
Q Consensus 908 ~~ 909 (1178)
+.
T Consensus 425 ~~ 426 (463)
T TIGR00944 425 IF 426 (463)
T ss_pred HH
Confidence 86
|
|
| >MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=405.01 Aligned_cols=299 Identities=39% Similarity=0.684 Sum_probs=255.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+...+..|+|++.+|++||+++++++.++..+++++++.|+++||+++|.+||.++|+|+..+|..+|+++++......+
T Consensus 5 g~~~~~~s~dl~~~~v~~El~~i~~~~Li~~~~~~~~~~~aa~kyfi~~~~gS~~~L~g~~~l~~~~g~~~~~~~~~~~~ 84 (365)
T MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84 (365)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHh
Confidence 34566789999999999999999999999887766678999999999999999999999999999899988865432211
Q ss_pred h-ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 L-NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~-~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
. .+.+.........++++|+++|+|++|||.|+||+|+++|+++++++++++|.+++..+.|+.. ..+++
T Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~K~~~~PfH~Wlpd~~~~ap~~~s~lls~~~K~g~~~ll~~~~~---------~~~~l 155 (365)
T MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL---------NVNIL 155 (365)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHccccccchhhhCcCCHHHHHHHHHHHHHHHHHHHHHHHh---------HHHHH
Confidence 1 1112223445567888999999999999999999999999999999999999999988755431 12467
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.+++++|+++|++.|++|+|+||++||||++|+||+++++.+.+. .+..++++|++.|.+.+..+|..+...
T Consensus 156 ~~l~~~s~i~g~~~al~Q~dlKrllAYSSIsh~G~ill~~~~~~~--------~~~~~~~~~~~~~~l~~~~lf~~~~~~ 227 (365)
T MTH00196 156 LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSF--------ESIQASLVYLFIYIIMSICVFSIILAL 227 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccH--------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999876543 466788999999999999999877655
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
++ +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++++.++.+.++...+.+++|++++. |.|+
T Consensus 228 ~~----~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~i~~~~svls~~yyl~~ 303 (365)
T MTH00196 228 NV----YKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303 (365)
T ss_pred hc----CcccHHHHhChHhhChHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 22 456889999999999999999999999999999999999999999999988777777778889999998 7888
Q ss_pred cc
Q psy5224 909 IK 910 (1178)
Q Consensus 909 ~~ 910 (1178)
.+
T Consensus 304 ~~ 305 (365)
T MTH00196 304 VK 305 (365)
T ss_pred HH
Confidence 74
|
|
| >PRK08168 NADH dehydrogenase subunit L; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=413.10 Aligned_cols=309 Identities=19% Similarity=0.268 Sum_probs=259.7
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~ 310 (1178)
.+++|++|..|..++++++.++..|+.++ ++++++||.+++++..++++++.|+|++++|++||.+++++|.|+.++
T Consensus 64 ~~~vD~lS~~~~~lv~~v~~~v~~ys~~Ym~~~~~~~~f~~llll~l~g~~~lv~S~dL~~l~v~wEl~sL~sy~Li~~~ 143 (516)
T PRK08168 64 WLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFY 143 (516)
T ss_pred eEEEcHHHHHHHHHHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 46799999999999999999999999543 345668999999999999999999999999999999999999999988
Q ss_pred CCCc-chHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh---hhhHHHHHHHHHHHHHHhhcCCCccccc
Q psy5224 311 GGSN-RSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI---TKIEQIWLFITFFIAFAIKIPIWPMHTW 386 (1178)
Q Consensus 311 ~~~~-~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~K~~~~PfH~W 386 (1178)
++++ +.+|+.||++++.+|+.++++|+.++|..+| |+|+.++.+... .+........++++|+.+|.++||||.|
T Consensus 144 ~~~~~a~~AA~Ky~i~~~vGs~~lL~gi~lLy~~tG-tl~~~~l~~~~~~~~~~~~~~~a~~Llllg~~~KsA~fPfH~W 222 (516)
T PRK08168 144 PDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVG-SLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGW 222 (516)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cccHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 8654 5799999999999999999999999998888 999988754211 1122334556788999999999999999
Q ss_pred ccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHH
Q psy5224 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHM 466 (1178)
Q Consensus 387 lp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~ 466 (1178)
+||+| |+|+|+++++++.+.|+|.|+++|+. +.++.. ..+..++.++|++|+++|++.++.|+|+||++|||||+||
T Consensus 223 LPda~-eAPTPVSALLha~vvk~G~y~LiRf~-~ll~~~-~~~~~ll~~lg~lT~l~G~l~AL~Q~dlKRlLAYSTIsQm 299 (516)
T PRK08168 223 LIQVM-EAPTPVSALLHAGVVNLGGFVLIRFA-PLLEQA-PPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQM 299 (516)
T ss_pred hhhhc-cCCcHHHHHHHHHHHHHHHHHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 99996 59999999998888999999999985 443322 3446778899999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHH-HHHHHHHHHhhcCCCCCc
Q psy5224 467 GFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHF-SVFFIIFSLANCSLPGTS 545 (1178)
Q Consensus 467 G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~-~~~~~i~~ls~~GlPp~~ 545 (1178)
|+++++++.++ ..++++|+++|+++|+.+|+++|.+++++|+|++++.++..++.|+. +....+.+....+ ..
T Consensus 300 G~mllglg~g~---~~~Allhli~Hal~Ka~LFL~aG~ii~~~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 373 (516)
T PRK08168 300 GFMLLECGLGL---YELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQSAAGVVSLLLAPLLSAALVLLLQ---SL 373 (516)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhcccccccccHHHHHHHHHHHHHHHHH---Hh
Confidence 99999998865 36799999999999999999999999999999999988877665655 3333343433333 33
Q ss_pred ccchHHH
Q psy5224 546 GFIGEFM 552 (1178)
Q Consensus 546 gF~~k~~ 552 (1178)
|+-.|+-
T Consensus 374 ~~~~~~p 380 (516)
T PRK08168 374 LPLGAWP 380 (516)
T ss_pred ccccCCc
Confidence 5556653
|
|
| >PRK07691 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=416.93 Aligned_cols=307 Identities=25% Similarity=0.445 Sum_probs=257.8
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|++||+++++++.++..++++ ++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 120 ~~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~~~-~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gs~~~~~l~~~~~ 198 (496)
T PRK07691 120 GVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIA 198 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHh
Confidence 34556789999999999999999999999766554 57899999999999999999999999999999999988754321
Q ss_pred hc-cCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 671 LN-NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 671 ~~-~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. ............++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++ .+.|+.....+.....+..+
T Consensus 199 ~~~~~~~~~~~~~~~l~~~g~~~K~g~fPfH~Wlp~a~~~ap~~vsalls~~~~K~g~~-~l~r~~~~~~~~~~~~~~~~ 277 (496)
T PRK07691 199 ELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVY-AIARTFTLFFSHDTSFTHYL 277 (496)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHHhccccccCccccCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchhHHHHH
Confidence 11 1112233345566788999999999999999999999999999999765 666555 55687654443332234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.
T Consensus 278 l~~l~~ls~i~g~~~al~q~d~KrlLAYSSIsq~G~i~l~l~~~~~--------~~~~g~l~~~~~h~~~k~~LFl~~g~ 349 (496)
T PRK07691 278 ILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE--------SGMIGAIYYLIHDMIVKAALFLLIGI 349 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHccH--------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999875432 35678899999999999999999998
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGR 907 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r 907 (1178)
+.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++||+++++.++.+.+++..+++++|+++++ |.|
T Consensus 350 i~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~i~~l~s~l~~~y~lr 427 (496)
T PRK07691 350 MIKIT--GTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIK 427 (496)
T ss_pred HHHhc--CcccHHHccChhhhchHHHHHHHHHHHHHhCCCccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88776 788999999999999999999999999999999999999999999999998877777777888999888 788
Q ss_pred hc
Q psy5224 908 II 909 (1178)
Q Consensus 908 ~~ 909 (1178)
+.
T Consensus 428 ~~ 429 (496)
T PRK07691 428 IF 429 (496)
T ss_pred HH
Confidence 86
|
|
| >PRK06277 hydrogenase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=414.66 Aligned_cols=306 Identities=25% Similarity=0.395 Sum_probs=260.7
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|++||++++++|.++..+++ +++.||++||+++|.+||.++|+|+.++|..+|++|+.++.+...
T Consensus 112 ~~~g~~~s~dl~~~~vf~E~~~i~~~~Li~~~~~-~~~~~Aa~ky~l~~~~gs~~~L~gi~~ly~~~gs~~~~~l~~~~~ 190 (478)
T PRK06277 112 SVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGT-EEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALL 190 (478)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHhh
Confidence 4555678999999999999999999999977654 568999999999999999999999999999999999988764321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHhhhhhhHhHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVII---YRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l---~~~~~~~~~~~~~~~~~ 747 (1178)
..+ ..........++++|+++|+|++|||.|+||+|+++|+++++++++++|++++..+ .|++... +....++.
T Consensus 191 ~~~-~~~~~~~~~~l~~~g~~~K~~l~PfH~Wlpda~~~ap~~~salls~~~K~~~~~~~~~l~r~~~~~--~~~~~~~~ 267 (478)
T PRK06277 191 VNP-TSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGL--SYFPSAQG 267 (478)
T ss_pred ccC-CchHHHHHHHHHHHHHHHHhCccchhccchhhhCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccchhHHH
Confidence 111 12233345667889999999999999999999999999999999999999888765 2432111 11223456
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|..++
T Consensus 268 ~l~~lg~is~i~g~~~Al~Q~dlKrllAYSSIs~~G~i~lgl~~~~~--------~~~~ga~~~~~~h~l~k~~lFl~~g 339 (478)
T PRK06277 268 VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTP--------LGIVAGIFHAINHVIYKSALFLGAG 339 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999876432 4667899999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
.+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++++.++.+.+++..+.+++|++++. |.
T Consensus 340 ~l~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~~l~s~~~~~~~l 417 (478)
T PRK06277 340 IVSYRT--KTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMM 417 (478)
T ss_pred HHHHhc--CCccHHHhCChhhhCHHHHHHHHHHHHHHhCCCccccHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 988766 788999999999999999999999999999999999999999999999998877777777888999888 78
Q ss_pred hhcc
Q psy5224 907 RIIK 910 (1178)
Q Consensus 907 r~~~ 910 (1178)
|+.+
T Consensus 418 r~~~ 421 (478)
T PRK06277 418 KAFY 421 (478)
T ss_pred HHHH
Confidence 8863
|
|
| >MTH00226 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=409.64 Aligned_cols=306 Identities=19% Similarity=0.286 Sum_probs=259.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
.......++|++.+|++||+.++++|.++..|+.++++.+|++||++++.+||.++++|+..+|..+|++|+.++.+...
T Consensus 143 ~~~g~f~s~dl~~fyif~E~~lip~y~LI~~~g~~~~~~~Aa~k~~iyt~~gS~~lL~gi~~ly~~~gs~~~~~l~~~~~ 222 (505)
T MTH00226 143 LLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSH 222 (505)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhhhh
Confidence 34455778999999999999999999999888877778999999999999999999999999999899999987754211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
..+..........+++|+++|+|++|||.|+||+|+++|++++++++++..+.+.|.+.|+.....+.....+.+++.
T Consensus 223 --~~~~~~~~~~~~~~~igf~vK~~lfPfH~WLPdah~eAPt~~S~lLagvl~K~G~ygllR~~~~~~~~~~~~~~~~l~ 300 (505)
T MTH00226 223 --VVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVI 300 (505)
T ss_pred --cccchhHHHHHHHHHHHHHHHhCccccccccchhhCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 112222334455677899999999999999999999999999999997755555556778866555544445667888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+|++++++...+. .+..++++|+++|++.+..+|+.++.++
T Consensus 301 ~lg~isii~gal~Al~Q~DlKrllAYSSIshmG~illgi~~~~~--------~g~~gal~~mi~Hgl~k~~LFl~~g~i~ 372 (505)
T MTH00226 301 AMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDI--------IGLTGSIFIMLAHGIVSSLLFILVTILY 372 (505)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875432 4678999999999999999999999998
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+.+ ...+..+++++++. +.|+.
T Consensus 373 ~~~--gtr~i~~l~GL~~~~P~~~~~~~i~~la~~GlPp~~GF~~e~~il~~~~~~~~~-~~~~~~~~~ilsa~Y~l~~~ 449 (505)
T MTH00226 373 DRH--HTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPI-IGVFVCSGVILSAVYSFYFA 449 (505)
T ss_pred Hhc--CcchHHHhcChHhHhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 887 789999999999999999999999999999999999999999999999987643 44556677777777 35554
|
|
| >MTH00204 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=411.88 Aligned_cols=303 Identities=24% Similarity=0.386 Sum_probs=257.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+.++++|.++..|++++++.+|++||++++.+||.++|+|+.++|..+|++|+.++...
T Consensus 124 ~~~g~~~s~dl~~fyvf~E~~~i~~~~Li~~~g~~~~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~~Gt~~~~~l~~~-- 201 (485)
T MTH00204 124 LLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI-- 201 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHhh--
Confidence 344567799999999999999999999998888777789999999999999999999999999999999999877531
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
..+.+...+....+++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++. +.|+.....++....+...+
T Consensus 202 --~~~~~~~~~~~~~~~~gf~~K~~~~PfH~WLPda~~~APt~~salLag~l~K~g~y~-l~R~~~~~~~~~~~~~~~~i 278 (485)
T MTH00204 202 --KLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYG-FLRFSWPLFPAASEYFAPLI 278 (485)
T ss_pred --hcchhHHHHHHHHHHHHHHHHcCcccchhhhhhhhccCChHHHHHHHHHHHHHHHHH-HHHHHHHhchhhHHHHHHHH
Confidence 1111122334456788999999999999999999999999999999865 6776665 66876555554444556678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|...+.+
T Consensus 279 ~~l~~~s~~~g~l~al~Q~dlKrllAYSSIsh~G~i~~gl~~~~~--------~g~~ga~~~~i~H~l~k~~lF~~~g~i 350 (485)
T MTH00204 279 VMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTI--------EGLVAAVFLMLAHGFVSSALFIAVTFL 350 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999865432 467889999999999999999999999
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
++++ +++++++++|+.+++|.++..+.++.+|++|+||+.||++|++++.+.++.+.+. ..+.++++++++. +.|+
T Consensus 351 ~~~~--~t~~i~~l~Gl~~~~P~~~~~~~i~~ls~~GiPp~~gF~~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~y~l~~ 427 (485)
T MTH00204 351 YERH--HTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGL-GVLVTSGMVWSAAYSLYL 427 (485)
T ss_pred HHhh--cceeHHhhcChHHHhHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 8776 7889999999999999999999999999999999999999999999999987443 4455667777777 3555
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 428 ~ 428 (485)
T MTH00204 428 Y 428 (485)
T ss_pred H
Confidence 4
|
|
| >PRK06521 hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=425.42 Aligned_cols=313 Identities=19% Similarity=0.350 Sum_probs=261.2
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++..+..++|++.+|++||++++++|.++..+++++++.|+++||++++.+|+.++++|+.++|..+|+++++++...
T Consensus 124 ~gm~~vv~s~dl~~f~v~~El~sl~s~~Lv~~~~~~~~~~~Aa~kY~i~~~~gs~~lL~g~~lly~~tGs~~~~~l~~~- 202 (667)
T PRK06521 124 ASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAA- 202 (667)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh-
Confidence 3556678899999999999999999999998777776677999999999999999999999999999999999877432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
+.++.......+++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++. +.|+.....+.....+...
T Consensus 203 ---~~~~~~~~~~~~l~l~gf~~K~g~~PfH~WLP~a~~~APt~vSallSgv~~K~g~y~-llR~~~~~~~~~~~~~~~~ 278 (667)
T PRK06521 203 ---HLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYG-ILRVVFDLLGAPGWWWGVL 278 (667)
T ss_pred ---ccCchHHHHHHHHHHHHHHHHhcccchhhhHhHHhccCCcHHHHHHHHHHHHHHHHH-HHHHHHHhcccchHHHHHH
Confidence 1222344456677889999999999999999999999999999999976 6666655 6677554443333345677
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhh---cccchhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIK---TSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
+..+|.+|+++|++.|++|+|+||++|||||+|+||+++++.... ..+.+.....+..++++|+++|.+.|..+|+.
T Consensus 279 l~~lg~~S~i~G~l~Al~Q~dlKrlLAYSSI~~~G~illglg~~~~~~~~~~~~l~~l~l~gal~hl~~Hal~K~lLFl~ 358 (667)
T PRK06521 279 VLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLG 358 (667)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999886531 11122234456788999999999999999999
Q ss_pred HHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH----------HHHHHH
Q psy5224 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI----------WLLLLI 895 (1178)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~----------~l~~l~ 895 (1178)
.+.+.++. +++++++++|+.+++|.++..+.++.+|++|+||+.||++||+++++.++.+.. ...+++
T Consensus 359 aG~v~~~~--gt~~i~~lgGL~~~mP~ta~~f~i~~lslaGlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 436 (667)
T PRK06521 359 AGAVLHAT--GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLKLAVPIAAAML 436 (667)
T ss_pred hCHHHHHh--CceeHHHhCCHHHhHHHHHHHHHHHHHHHHhchhhhhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHH
Confidence 99888876 789999999999999999999999999999999999999999999999987531 123456
Q ss_pred HHHHHHHHh-hhhhc
Q psy5224 896 IMCSLIGAK-GGRII 909 (1178)
Q Consensus 896 ll~s~~~~~-~~r~~ 909 (1178)
.+++.+++. |.|+.
T Consensus 437 ~l~s~la~~y~~k~~ 451 (667)
T PRK06521 437 ALTAALAAMCFVKFY 451 (667)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677788877 67875
|
|
| >PRK08376 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=415.56 Aligned_cols=314 Identities=26% Similarity=0.391 Sum_probs=264.3
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-+......|+|++.+|++||+++++++.++..+++++++.|+++||+++|.+||.++++|+.++|..+|++|++++....
T Consensus 132 ~g~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gt~~~~~l~~~~ 211 (521)
T PRK08376 132 LGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKM 211 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 35566788999999999999999999999987776667899999999999999999999999999999999998875432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hHhHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPL--VINWQK 747 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~--~~~~~~ 747 (1178)
.. .+.........++++|+++|+|++|||.|+||+|+++|+++++++ +++|+++.+.+.|+.....++. ...+..
T Consensus 212 ~~--~~~~~~~~~~~l~~~g~~~K~g~~PfH~Wlpda~~~ap~~~sall-~~~k~~g~y~l~r~~~~~~~~~~~~~~~~~ 288 (521)
T PRK08376 212 SE--NPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML-LVIKQAGLYALARVLFSIYGPAINLATVGW 288 (521)
T ss_pred hc--CcchHHHHHHHHHHHHHHHHhccCccceecccccccCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccchhhHHHH
Confidence 21 122234456677888999999999999999999999999999999 8899999999889865444322 134556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhccc----chhHHhhhhhhHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSH----NNLIIFNSCDSGLFYIITYIFAILGAF 823 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~lf 823 (1178)
++.++|++|+++|++.|++|+|+||++|||||+|+||+++++....... .......+..++++|+++|.+.+..+|
T Consensus 289 ~l~~l~~~s~i~g~l~al~Q~dlKrlLAYSSIs~~G~il~~l~~~~~~~~~~~~~~~~~~~~~gal~~~~~h~~~k~~lF 368 (521)
T PRK08376 289 VIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLF 368 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999999886432100 001123467789999999999999999
Q ss_pred HHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q psy5224 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903 (1178)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~ 903 (1178)
...+.+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++||+++++..+.+ +++.++.+++|++++
T Consensus 369 l~~g~i~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~GF~~K~~i~~~~~~~~-~~l~~i~~l~s~ls~ 445 (521)
T PRK08376 369 LTAGAVIYET--GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFN-PILGVIAMIGSVLTL 445 (521)
T ss_pred HHHHHHHHHc--CCccHHHhcChhhhChHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHH
Confidence 9999888765 7789999999999999999999999999999999999999999999998765 455666778899988
Q ss_pred h-hhhhc
Q psy5224 904 K-GGRII 909 (1178)
Q Consensus 904 ~-~~r~~ 909 (1178)
. |.|+.
T Consensus 446 ~yylr~~ 452 (521)
T PRK08376 446 ASFVKVF 452 (521)
T ss_pred HHHHHHH
Confidence 8 88887
|
|
| >MTH00217 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=409.22 Aligned_cols=298 Identities=22% Similarity=0.375 Sum_probs=254.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+.++++|.++..|++++++.||++||++++.+||.++|+|+..+|..+|++|+.++....
T Consensus 121 ~~~g~f~s~dl~~fyv~~E~~~i~~~~Li~~~g~~~~~~~A~~ky~i~~~~gs~~lL~gi~~ly~~~gt~~~~~l~~~~- 199 (482)
T MTH00217 121 LLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK- 199 (482)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhheeeCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHhhh-
Confidence 3445678899999999999999999999988887777899999999999999999999999999999999998775321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.+.........++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+.+. +.|+.....+.....+..++
T Consensus 200 ---~~~~~~~~~~~~~~~gf~~K~~l~PfH~WlPda~~~APt~~S~llagvl~K~g~yg-l~R~~~~~~~~~~~~~~~~l 275 (482)
T MTH00217 200 ---IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYG-FIRFSWPLLPEASEYFSPLI 275 (482)
T ss_pred ---cchhhHHHHHHHHHHHHHHHhcccccceeCccccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHHHH
Confidence 112233344566789999999999999999999999999999999966 6666655 66876555444344456678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++|||||+|+|++++++.+.+ ..+..++++|+++|++.+..+|...+.+
T Consensus 276 ~~l~~~s~i~g~~~al~Q~dlKrllAYSSIshmG~i~lgl~~~~--------~~g~~gal~~~i~H~~~~~~lF~~~g~l 347 (482)
T MTH00217 276 QTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHT--------IQGLVAAIFLMLAHGLVSSALFIAVTFL 347 (482)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999986543 2477899999999999999999999999
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK 904 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~ 904 (1178)
++++ +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+.+ ...+..+++++++.
T Consensus 348 ~~~~--~t~~i~~l~Gl~~~~P~~~~~~~i~~ls~~GlPp~~gF~~k~~il~~~~~~~~~-~~~~~~~~~~ls~~ 419 (482)
T MTH00217 348 YERH--HTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYI-VGVLASLGMVLSAG 419 (482)
T ss_pred HHcc--CcEeHHHhcCHHHHhHHHHHHHHHHHHHHhhhhhcchHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 8876 788999999999999999999999999999999999999999999999997744 34555667777755
|
|
| >PRK12663 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=412.89 Aligned_cols=306 Identities=23% Similarity=0.415 Sum_probs=256.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+....|+|++.+|+++|+++++++.++..++ ++++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 120 g~~~~~~s~dl~~~~v~~El~~i~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~g~~~~~~l~~~~~ 198 (497)
T PRK12663 120 GVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQ-EREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLN 198 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHH
Confidence 345567899999999999999999999997654 4568999999999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
... ..........++++|+++|+|++||| |+||+|+++|++++++++++.++.+.+.+.|+.....+.....+..++.
T Consensus 199 ~~~-~~~~~~~~~~l~~~g~~~K~g~fPfH-Wlp~a~~~ap~~~salls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~ 276 (497)
T PRK12663 199 DMG-DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLA 276 (497)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHHhcccc-cCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHH
Confidence 111 11122233445668999999999999 9999999999999999998644445555667754433332234456788
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|...+.++
T Consensus 277 ~l~~~s~i~g~l~al~q~dlKrllAYSSIs~~G~i~~~~~~~~~--------~~~~~~~~~~~~h~~~k~~LF~~~g~~~ 348 (497)
T PRK12663 277 TMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTP--------AGINGAIFYLVHDMVVKTALFLIAGSLV 348 (497)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999875432 3566789999999999999999998888
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++.+.++.+.+++.++++++|++++. |.|++
T Consensus 349 ~~~--~~~~l~~l~Gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~i~ll~s~ls~~y~lr~~ 426 (497)
T PRK12663 349 RLT--GYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF 426 (497)
T ss_pred Hhc--CcccHHHccChhhhhhHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 775 788999999999999999999999999999999999999999999999998877777778889999888 78886
|
|
| >MTH00150 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=402.08 Aligned_cols=302 Identities=20% Similarity=0.281 Sum_probs=256.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+++++++.++..++.++++.||+.||++.+..|+.+++.|+.+.|..+|++|+.++.....
T Consensus 67 ~~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~~~~~~~~A~~~~~~~~~~~s~~ll~gi~~~y~~~gs~~~~~~~~~~~ 146 (417)
T MTH00150 67 ILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRK 146 (417)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHhhc
Confidence 34455679999999999999999999999877766678999999999999999999999999999999999977644211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.......+..++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+..... +....+..++
T Consensus 147 ----~~~~~~~~~~lil~g~~~K~~l~PfH~WlPda~~~ap~~~s~llsgv~~K~g~y~-liR~~~~~~-~~~~~~~~~l 220 (417)
T MTH00150 147 ----LLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYG-ILRMMMVFS-LSSSSFSIFL 220 (417)
T ss_pred ----chhHHHHHHHHHHHHHHHhCCccccccccchhhccCCchHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHH
Confidence 1112344567788999999999999999999999999999999985 58888776 567654322 2223345678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.+++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.+
T Consensus 221 ~~l~~~s~i~g~l~al~Q~dlKrllAYSSIsh~G~il~gi~~~~~--------~~~~~~l~~~~~h~~~k~~lF~~~g~i 292 (417)
T MTH00150 221 ISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTS--------WGWVGALIMMVSHGFCSSGLFCLANYT 292 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHcch--------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999875432 356789999999999999999999998
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
++++ +++++++++|+.+++|.++..+.++.+|++|+||+.||++|++++.+.++.+. +..++.++++++++. |.|+
T Consensus 293 ~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~Y~l~~ 369 (417)
T MTH00150 293 YEKV--HSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSP-WFFVPLGLMVFLSGLYSLYL 369 (417)
T ss_pred HHHH--CceeHHHhcChHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHH
Confidence 8776 77899999999999999999999999999999999999999999999999875 456667788899988 6777
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 370 ~ 370 (417)
T MTH00150 370 Y 370 (417)
T ss_pred H
Confidence 6
|
|
| >MTH00014 ND4 NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=403.19 Aligned_cols=302 Identities=19% Similarity=0.271 Sum_probs=257.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+...+++|++.+|+++|+++++++.++..|+.++++.||++||++++.+||.+++.|+.++|..+|++|+.++.. .
T Consensus 102 ~l~~~f~s~dl~~fyv~~E~~li~~~~LI~~~g~~~~~~~A~~y~li~t~~gS~~lL~gi~~ly~~~gsl~~~~l~~--~ 179 (452)
T MTH00014 102 ILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSM--E 179 (452)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHhh--h
Confidence 34456789999999999999999999999888888889999999999999999999999999999999999876621 1
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.+ ..........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+... .+.....+...+
T Consensus 180 -~~-~~~~~~~~~~l~llgf~vK~~l~PfH~WLP~a~~~ap~~~s~llagi~~K~g~y~-liR~~~~-~~~~~~~~~~~l 255 (452)
T MTH00014 180 -PP-SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYG-LLRMSSL-FMHINKSLSAPF 255 (452)
T ss_pred -cc-cchHHHHHHHHHHHHHHHhcccccchhcCchhhccCChHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHH
Confidence 11 1112334456678899999999999999999999999999999986 68888877 5576532 222223445677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+.++|...+.+
T Consensus 256 ~~l~~~s~i~g~l~al~Q~dlKrllAYSSIshmG~il~gi~~~~~--------~~~~ga~~~~i~h~l~~~~lF~~~g~~ 327 (452)
T MTH00014 256 SSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTS--------WGWQGALAMMIAHGLCSSALFALANMT 327 (452)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999875432 467899999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
+++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+ ++...++++++++++. |.|+
T Consensus 328 ~~~~--~t~~i~~~~Gl~~~~P~~~~~~~i~~ls~~GiPp~~gF~~e~~i~~~~~~~~-~~~~~~~~~~s~ls~~y~l~~ 404 (452)
T MTH00014 328 YETT--HTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSS-LSTAILLAITSFLAAAYSLFL 404 (452)
T ss_pred HHHh--CcccHHHcCCchhhhHHHHHHHHHHHHHHhhCcccchHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHH
Confidence 8776 7889999999999999999999999999999999999999999999999977 4566667888999988 6787
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 405 ~ 405 (452)
T MTH00014 405 Y 405 (452)
T ss_pred H
Confidence 6
|
|
| >TIGR01331 bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, bacterial | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=387.86 Aligned_cols=226 Identities=23% Similarity=0.296 Sum_probs=186.1
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC---CCCccE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN---FENENI 997 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~---~~~~~~ 997 (1178)
+++.+.+++++|++.+++.+++ ..+++.|+++|+||++|+++|+.|++.|++.+|++.|+|||.+.... ...+++
T Consensus 1 ~l~~a~~~a~~ag~~~~~~~~~--~~~~~~k~~~d~vT~aD~~~e~~i~~~L~~~~P~~~i~gEE~~~~~~~~~~~~~~~ 78 (249)
T TIGR01331 1 MLDDVIKIARAAGEEILPVYQK--ELAVAQKADNSPVTEADRAAHRFILEGLRALTPDIPVLSEEDASIPLTPRQTWQRF 78 (249)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc--CCcEEECCCCCcccHHHHHHHHHHHHHHHHhCCCCcEEeccccccccccccCCCcE
Confidence 3678999999999999998754 45677899999999999999999999999999999999999875321 223578
Q ss_pred EEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEc--C----eecccCCCCCCCCcEEE
Q psy5224 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLN--E----KRIRVNKRNKINDALIG 1071 (1178)
Q Consensus 998 wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n--~----~~~~~~~~~~~~~~~~~ 1071 (1178)
|+|||||||+||++|.|.||++||+.++|+|++||||+|.+||+|+|.+|+|+++| | +++++++.++ .+..+.
T Consensus 79 WvIDPIDGT~nF~~G~p~~~vsIal~~~g~pv~gvI~~P~~~~~~~A~~G~Ga~~n~~g~~~~~~i~~~~~~~-~~~~~~ 157 (249)
T TIGR01331 79 WLVDPLDGTKEFINRNGDFTVNIALVEHGVPVLGVVYAPATGVTYFATAGKAAKREGDGQALKAPIHVRPWPS-GPLLVV 157 (249)
T ss_pred EEEcCCcChHHHhcCCCcEEEEEEEEECCEEEEEEEEecCCCCEEEEECCcceEEecCCCccceeeeccCCCC-CceEEE
Confidence 99999999999999999999999999999999999999999999999999999998 6 4555554333 344444
Q ss_pred eccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC-CccchHHHHHHHHHcCCcccccCCCC
Q psy5224 1072 TDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNFKGEK 1150 (1178)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~-~~wD~aA~~~i~~eaGg~v~d~~G~~ 1150 (1178)
++.+. . .+...+..+. ...++|+.||+++++|+||+|++|+|++.+. ++||+|||.+|+|||||.++|++|+|
T Consensus 158 ~~~~~---~-~~~~~~~~~~--~~~~~r~~gs~al~l~~VA~G~~d~~~~~~~~~~WD~aAg~~i~~eAGG~vtd~~G~~ 231 (249)
T TIGR01331 158 ISRSH---A-EEKTTEYLAN--LGYDLRTSGGSSLKFCLVAEGSADIYPRLGPTGEWDTAAGHAVLAAAGGAIFDLDGSP 231 (249)
T ss_pred EecCC---C-CHHHHHHHHH--cCCcceeeccHHHHhHHHhcCCCCEEEcCCCCccccchHHHHHHHHCCCeEECCCCCe
Confidence 44322 1 1122222221 2457899999999999999999999998774 68999999999999999999999998
Q ss_pred CCCCC
Q psy5224 1151 NYLYT 1155 (1178)
Q Consensus 1151 ~~~~~ 1155 (1178)
..+.+
T Consensus 232 ~~~~~ 236 (249)
T TIGR01331 232 LLYGK 236 (249)
T ss_pred eecCC
Confidence 66554
|
Sulfate is incorporated into 3-phosphoadenylylsulfate, PAPS, for utilization in pathways such as methionine biosynthesis. Transfer of sulfate from PAPS to an acceptor leaves adenosine 3'-5'-bisphosphate, APS. This model describes a form found in bacteria of the enzyme 3'(2'),5'-bisphosphate nucleotidase, which removes the 3'-phosphate from APS to regenerate AMP and help drive the cycle. |
| >PRK06458 hydrogenase 4 subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-42 Score=410.41 Aligned_cols=308 Identities=21% Similarity=0.343 Sum_probs=257.4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhH-----
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSI----- 665 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~----- 665 (1178)
+......++|++.+|++||+++++++.++..+++ +++.|+++||+++|.+||.++++|+.++|..+|++++.+.
T Consensus 120 ~~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~~-~~~~~aa~kY~i~~~~gs~~~L~gi~~ly~~~g~~~~~~~~~~~~ 198 (490)
T PRK06458 120 TMLLALTSNNLGLMWVAIEATTLSSALLVGIYRT-RASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAILW 198 (490)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccchhhhH
Confidence 4556678999999999999999999999977654 5689999999999999999999999999999998887432
Q ss_pred HHHh-hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhH
Q psy5224 666 FNVI-KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP-LVI 743 (1178)
Q Consensus 666 ~~~~-~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~-~~~ 743 (1178)
.+.. .....++........++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....+. ...
T Consensus 199 ~~l~~~~~~~~~~~~~~~~~l~~~g~~~K~g~fPfH~Wlpda~~~ap~~vsalls~~~~k~g~~~llr~~~~~~~~~~~~ 278 (490)
T PRK06458 199 TELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSD 278 (490)
T ss_pred HHHHHhhcccCchHHHHHHHHHHHHHHHHhccCcchhcchhhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 1110 01111223344566788899999999999999999999999999999999875555555666765433322 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHH
Q psy5224 744 NWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF 823 (1178)
Q Consensus 744 ~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf 823 (1178)
.+..++.++|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|
T Consensus 279 ~~~~~l~~l~~ls~i~g~l~al~q~dlKrlLAYSSI~~~G~i~~~~~~~~~--------~~~~~~~~~~~~h~~~k~~lF 350 (490)
T PRK06458 279 FPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP--------LGIFAALLHMLNHSLTKSAIF 350 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 346788899999999999999999999999999999999999999875432 355678999999999999999
Q ss_pred HHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q psy5224 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903 (1178)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~ 903 (1178)
...+.+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++||+++++.++.+.+++..+.++++++++
T Consensus 351 l~~g~i~~~~--~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~ 428 (490)
T PRK06458 351 FASGNVLQKY--GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAF 428 (490)
T ss_pred HHHHHHHHHh--CCeeHHHhCChhhhCcHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999888776 78889999999999999999999999999999999999999999999999988777777888889888
Q ss_pred h-hhhhc
Q psy5224 904 K-GGRII 909 (1178)
Q Consensus 904 ~-~~r~~ 909 (1178)
. |.|.+
T Consensus 429 ~y~~~~~ 435 (490)
T PRK06458 429 AALVRRV 435 (490)
T ss_pred HHHHHHH
Confidence 8 67776
|
|
| >PRK12662 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-42 Score=410.72 Aligned_cols=306 Identities=27% Similarity=0.506 Sum_probs=256.8
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||+++++++.++..++ ++++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 122 g~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~-~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gs~~~~~l~~~~~ 200 (492)
T PRK12662 122 GLLGILVSNDVFNIYVFLEISSISSYVLVAMGR-DKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQ 200 (492)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHh
Confidence 445567899999999999999999999997654 4568999999999999999999999999999999999987754322
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhh----HhH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLV----INW 745 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~----~~~ 745 (1178)
... .+........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++ .+.|+.....+... ..+
T Consensus 201 ~~~-~~~~~~~~~~l~~~g~~~K~g~~PfH~WlP~a~~~apt~vsalls~~~~K~g~~-~l~r~~~~~~~~~~~~~~~~~ 278 (492)
T PRK12662 201 DLP-TNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIY-LIIRIVYDVFKANFVFTTLPF 278 (492)
T ss_pred hcC-CccHHHHHHHHHHHHHHHHhcccchheecccccCCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHccchhhhccccH
Confidence 111 1122334566788899999999999999999999999888888885 5776664 55576543332211 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 746 ~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
..++..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|..
T Consensus 279 ~~~l~~l~~ls~~~g~l~al~q~dlKrlLAySSIsq~G~i~~~i~~~~~--------~~~~~~l~~~~~h~~~k~~lF~~ 350 (492)
T PRK12662 279 NNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTY--------YGLAAAVAYIVNHSIVKSALFMV 350 (492)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999875432 35678899999999999999999
Q ss_pred HHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-
Q psy5224 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK- 904 (1178)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~- 904 (1178)
.+.+.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.++.+.++..++++++|++++.
T Consensus 351 ~g~i~~~~--~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~~~~s~ls~~y 428 (492)
T PRK12662 351 SGSISYHF--GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIY 428 (492)
T ss_pred HHHHHHHc--CcccHHHhcChhhhChHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 99888776 788899999999999999999999999999999999999999999999998877766667788999888
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
|.|++
T Consensus 429 ~lr~~ 433 (492)
T PRK12662 429 VWKIV 433 (492)
T ss_pred HHHHH
Confidence 78886
|
|
| >PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=409.60 Aligned_cols=303 Identities=22% Similarity=0.324 Sum_probs=256.4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHH--HHhhccccchhhHHHH
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISI--LYGITGTLELQSIFNV 668 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~l--l~~~~gs~~~~~~~~~ 668 (1178)
+......++|++.+|++||++++++|.++..++++ ++.||++||++++.+||.++|+|+.. .|..+|++++.++...
T Consensus 127 g~~~~~~s~dl~~~yv~~El~~l~~~~Li~~~~~~-~~~~Aa~ky~i~~~~gs~~lL~gi~~l~~~~~~gs~~~~~l~~~ 205 (525)
T PRK02546 127 GQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAK 205 (525)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHhh
Confidence 45566789999999999999999999999877654 57899999999999999999999764 3556789998877532
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
..+.+...+...++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++ .+.|+.....+.....+..
T Consensus 206 ----~~~~~~~~~~~~~~l~gf~~K~~~fPfH~WLPda~~~ap~~vsa~Lsgv~~K~g~y-~l~R~~~~~~~~~~~~~~~ 280 (525)
T PRK02546 206 ----DFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGY-ALLRMNAGMLPDAHAQFAP 280 (525)
T ss_pred ----ccchhhHHHHHHHHHHHHHHhcCcccchhhhhhhcCCCChHHHHHHHHHHHHHHHH-HHHHHHHHHhHhHHHHHHH
Confidence 1112233344556778999999999999999999999999999999855 666665 5678765555444445667
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++.+.+. .+..++++|+++|++.+..+|...+
T Consensus 281 ~l~~lg~~s~i~g~~~Al~Q~dlKrllAYSSIsh~G~illgl~~~~~--------~g~~gal~~~l~H~l~k~~LFl~~g 352 (525)
T PRK02546 281 LLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTD--------LGTSGAMLQMISHGLIGASLFFLVG 352 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88899999999999999999999999999999999999999875432 4678899999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH------HHHHHHHHHHHH
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI------WLLLLIIMCSLI 901 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~------~l~~l~ll~s~~ 901 (1178)
.+++++ +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+..+.+.+ +...+.++++++
T Consensus 353 ~i~~~~--gt~~l~~l~GL~~~~P~~~~~~~i~~ls~~GiPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~l 430 (525)
T PRK02546 353 ATYDRT--HTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVGVIL 430 (525)
T ss_pred HHHHhc--CcEeHHHhcCHHhhhHHHHHHHHHHHHHHHhchhhchHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHH
Confidence 998876 789999999999999999999999999999999999999999999999987654 345567788899
Q ss_pred HHh-hhhhc
Q psy5224 902 GAK-GGRII 909 (1178)
Q Consensus 902 ~~~-~~r~~ 909 (1178)
++. |.|++
T Consensus 431 s~~Y~lr~~ 439 (525)
T PRK02546 431 TPIYLLSML 439 (525)
T ss_pred HHHHHHHHH
Confidence 888 68876
|
|
| >cd01637 IMPase_like Inositol-monophosphatase-like domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=384.71 Aligned_cols=234 Identities=32% Similarity=0.566 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC-CCCccEEEEe
Q psy5224 923 VEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN-FENENIWIID 1001 (1178)
Q Consensus 923 ~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~-~~~~~~wvID 1001 (1178)
+.+++++++|++.+++.+++... ..++|+++|+||++|+++|+.|++.|++.+|++.|+|||.+.... .+++++|+||
T Consensus 2 ~~a~~~a~~a~~~~~~~~~~~~~-~~~~~~~~d~vt~aD~~~e~~i~~~L~~~~p~~~i~~EE~~~~~~~~~~~~~wviD 80 (238)
T cd01637 2 ELALKAVREAGALILEAFGEELT-VETKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGEEGGGSGNVSDGGRVWVID 80 (238)
T ss_pred hHHHHHHHHHHHHHHHHhccccc-eeeecCCCCcccHHHHHHHHHHHHHHHHHCCCCeEEecCCCCcCCCCCCCcEEEEc
Confidence 57899999999999988755322 235567889999999999999999999999999999999876432 2567999999
Q ss_pred ccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCC
Q psy5224 1002 PLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNIN 1081 (1178)
Q Consensus 1002 PIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1081 (1178)
|||||+||++|.|.||++||+.++|+|++|+||+|.++++|+|.+|.|+++|+++++++++.++++..+.+..+....
T Consensus 81 PIDGT~nf~~g~p~~~vsial~~~g~pv~gvv~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (238)
T cd01637 81 PIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDELYYAGRGKGAFLNGKKLPLSKDTPLNDALLSTNASMLRS-- 158 (238)
T ss_pred ceeChhhhhcCCCCEEEEEEEEECCEEEEEEEecCCCCcEEEEECCccccCCCeEccCCCCCCHHHcEEEecCCcccc--
Confidence 999999999999999999999999999999999999999999999999999999999988888777777766543222
Q ss_pred hHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCC-CCCcEEE
Q psy5224 1082 SEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYL-YTGDIVA 1160 (1178)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~-~~~~iva 1160 (1178)
...+...+...+..++|+.||+++++|+||+|+.|+|++.+.++||+||+.+|++||||.++|.+|+|... .++.++|
T Consensus 159 -~~~~~~~~~~~~~~~~r~~Gs~~l~~~~va~G~~d~~~~~~~~~wD~aAg~~i~~eaGG~v~d~~G~~~~~~~~~~~ia 237 (238)
T cd01637 159 -NRAAVLASLVNRALGIRIYGSAGLDLAYVAAGRLDAYLSSGLNPWDYAAGALIVEEAGGIVTDLDGEPLDTLNRSGIIA 237 (238)
T ss_pred -hHHHHHHHHHHHhCccccccHHHHHHHHHHcCCccEEEECCCCHHHHHHHHHHHHhCCcEEeCCCCCcCcccCCCeEEe
Confidence 11123334445667899999999999999999999999999999999999999999999999999999753 4455665
|
This family of phosphatases is dependent on bivalent metal ions such as Mg++, and many members are inhibited by Li+ (which is thought to displace a bivalent ion in the active site). Substrates include fructose-1,6-bisphosphate, inositol poly- and monophosphates, PAP and PAPS, sedoheptulose-1,7-bisphosphate and probably others. |
| >PRK08601 NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=393.90 Aligned_cols=292 Identities=23% Similarity=0.332 Sum_probs=248.5
Q ss_pred hhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5224 234 FLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310 (1178)
Q Consensus 234 ~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~ 310 (1178)
.+.+|.+|.++..++.++++++.+|+.++ +++.++|+.++++...++.+++.|+|++++|++||++++++|.|+..+
T Consensus 67 ~f~vD~lS~~~~llv~~v~~lv~lys~~Ym~~~~~~~~f~~L~ll~~~g~~~~~~S~DL~l~~vfwEl~sl~sy~LI~~~ 146 (509)
T PRK08601 67 PWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLN 146 (509)
T ss_pred ceEEcHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999433 244568999999999999999999999999999999999999999998
Q ss_pred CCCcch-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhh----hhhhhHHHHHHHHHHHHHHhhcCCCcccc
Q psy5224 311 GGSNRS-YAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQL----SITKIEQIWLFITFFIAFAIKIPIWPMHT 385 (1178)
Q Consensus 311 ~~~~~~-~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~K~~~~PfH~ 385 (1178)
+++++. +|+.|+..+...|+..+++|+.++|..+| ++|+...... +.++........++++|+.+|++++|||.
T Consensus 147 ~~~~~~~~A~~~~~~~~l~gs~~lLlgi~~LY~~tG-s~~~~~~~~~~~l~~~~~~~~~~i~lLll~g~~~KaalfPfH~ 225 (509)
T PRK08601 147 KGWKVAREAAKISGMLFLISWLALALAIVWLFIATG-EWQLTSVLSNENLAQLGTWEKTGINLLLILAVMIPAAQWPFQR 225 (509)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHhhccchh
Confidence 876654 55566666677888999999999998888 8776543221 11111222344567789999999999999
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhH
Q psy5224 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465 (1178)
Q Consensus 386 Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~ 465 (1178)
|+||+| ++|+|+++++++.++|+|.|++.|+. +.+++. .+..++.++|.+|+++|++.|++|+|+||++|||||+|
T Consensus 226 WLPdA~-~APTpVSAlLsa~lvkaG~y~LiR~~-~l~~~~--~~~~ll~ilg~lS~i~G~l~AL~Q~DlKRlLAYSSIsq 301 (509)
T PRK08601 226 WLIESA-VAPTPVSAIMHAGLVNAGGIMLTRFS-PLFHDD--IAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQ 301 (509)
T ss_pred hccccc-CCCcHHHHHHHHHHHHHHHHHHHHHH-HhccHH--HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 999997 79999999999999999999999985 555542 45678889999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHHHHHHHHHH
Q psy5224 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSL 536 (1178)
Q Consensus 466 ~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~~~~~i~~l 536 (1178)
+|+++++++.+ +..++++|+++|++.|+.+|+++|.+++++| +++.+|..+++|+....+.++++
T Consensus 302 mGymllgi~~g---~~~gal~hli~Hal~Ka~LFL~aG~I~~~~g---~~~~~~~~~~~~~~~~~~~l~~~ 366 (509)
T PRK08601 302 MGFMLVQCALG---AYSAAIIHLILHGLFKATLFLQSGSAVPRFN---IVKQANEKKSYLWIVVGRVLGLL 366 (509)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CcccchhhhcCcHHHHHHHHHHH
Confidence 99999999886 4679999999999999999999999999998 66778888999999998888874
|
|
| >PF00361 Oxidored_q1: NADH-Ubiquinone/plastoquinone (complex I), various chains; InterPro: IPR001750 NADH:ubiquinone oxidoreductase (complex I) (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=392.44 Aligned_cols=268 Identities=36% Similarity=0.651 Sum_probs=239.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhHHH
Q psy5224 286 ALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQI 364 (1178)
Q Consensus 286 s~dl~~~~~~~E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 364 (1178)
|+|++.+|++||+++++++.++..++++ ++.++++||++++.+||.++++|+.+++..+| ++|+.+..+...++....
T Consensus 1 S~~~~~~~v~~E~~~l~~~~li~~~~~~~~~~~~~~ky~i~~~~~s~~ll~g~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 79 (270)
T PF00361_consen 1 SSDLFLFWVFLELMSLSSFLLILFSGTSPSSIEAALKYFIIQSLGSVLLLLGIILLYAFTG-SLNFSDLFLSPFSNSTSP 79 (270)
T ss_dssp BSBSHHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---CCCHHHH-TT-TCHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhcccC-Cccccccccccccccccc
Confidence 6899999999999999999999988866 77899999999999999999999999888777 888776655444455667
Q ss_pred HHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHH
Q psy5224 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYI 444 (1178)
Q Consensus 365 ~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g 444 (1178)
....++++|+.+|+|++|||.|+||+|+++|++.+++++++++|+|+|++.|+..... ....+..++..+|++|+++|
T Consensus 80 ~~~~l~~~g~~iKlg~~PfH~Wl~~~~~~~~~~~~~~ls~~~~~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~s~l~g 157 (270)
T PF00361_consen 80 LGLILILLGFLIKLGLFPFHFWLPDVYESAPPPVSALLSGVQKKLGLYGLLRFFSLLF--LSPFWSNILLILGLISILYG 157 (270)
T ss_dssp HHHHHHHHHHHHHHT-TTSTTHHHHHHHHSHHHHHHHHHTTHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhhhhccccccccccccccccccccccceeeeccccc--cccccccccccccchhhhhh
Confidence 7888999999999999999999999999999999999999999999999999876544 34456778999999999999
Q ss_pred HHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhh
Q psy5224 445 SLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524 (1178)
Q Consensus 445 ~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~ 524 (1178)
++.|++|+|+||++|||||+|+|++++++...+..+..++++|++.|++.|+.+|+.+|.++++.|++++++++|+.+++
T Consensus 158 ~~~al~q~d~krllaySSi~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~lF~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (270)
T PF00361_consen 158 SIMALKQKDLKRLLAYSSISQMGWILLGILSLNSYGLTGALFYLISHSLSKALLFLLAGAIYRRYGTRNISKLSGLFRKM 237 (270)
T ss_dssp HHHHTT-SBHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--BGGG-SSGTTTS
T ss_pred HHhhhccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhhhhhhhhHHH
Confidence 99999999999999999999999998898888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCcccchHHHHHHH
Q psy5224 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILS 556 (1178)
Q Consensus 525 p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~ 556 (1178)
|.....+.+..++++|+||+.||++|++++++
T Consensus 238 p~~~~~~~~~~lsl~G~Pp~~gF~~K~~il~~ 269 (270)
T PF00361_consen 238 PFLSLLFLLGLLSLAGLPPFSGFFSKWLILSS 269 (270)
T ss_dssp HHHHHHHHHHHHHHCT-TTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhC
Confidence 99999999999999999999999999999876
|
6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This domain is found in the NADH:ubiquinone oxidoreductase (complex I) and NADH-plastoquinone oxidoreductase [].; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport, 0055114 oxidation-reduction process; PDB: 3RKO_D. |
| >PRK08676 hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=403.98 Aligned_cols=300 Identities=27% Similarity=0.376 Sum_probs=249.7
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------ccccchhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI------TGTLELQS 664 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~------~gs~~~~~ 664 (1178)
+......++|++.+|++||++++++|.++..+++ +++.|+++||+++|++++.+.++|+.++|.. +|++|+++
T Consensus 114 ~~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~~-~~~~~aa~kY~i~~s~~~~~~l~gi~lly~~~~~~~~~gt~~~~~ 192 (485)
T PRK08676 114 VITFAFFSDNLALFWIFAELTTVFSAMLIAILSA-RENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQALGTGTLNWTE 192 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHH
Confidence 4555678999999999999999999999987765 4689999999999999999999999988863 68899887
Q ss_pred HHHHhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhH
Q psy5224 665 IFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP-LVI 743 (1178)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~-~~~ 743 (1178)
+.+.. ...++....+...++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+......+ ...
T Consensus 193 l~~~~--~~~~~~~~~~~~~l~~~g~~~K~~l~PfH~WlPda~~~aP~~~Salls~~~~K~g~y~l~R~~~~~~~~~~~~ 270 (485)
T PRK08676 193 LAAHA--SLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAE 270 (485)
T ss_pred HHHhh--ccCChhHHHHHHHHHHHHHHHHHhhcccceecccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 65421 122333445566788899999999999999999999999999999999886666666677875433322 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHH
Q psy5224 744 NWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF 823 (1178)
Q Consensus 744 ~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf 823 (1178)
.+..++.++|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|
T Consensus 271 ~~~~~l~~l~~ls~~~gal~al~Q~dlKrllAYSSIshmG~ill~i~~~~~--------~~~~~al~~~i~H~~~k~~LF 342 (485)
T PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTP--------LALFWMLFHMLAHSLVKSGLF 342 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 456778889999999999999999999999999999999999999875432 356788999999999999999
Q ss_pred HHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q psy5224 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903 (1178)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~ 903 (1178)
+..+.++++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++.+.++.+.++..+ .++++++++
T Consensus 343 l~~G~i~~~~--~t~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~-~~~~~~l~a 419 (485)
T PRK08676 343 FSAGILHRQY--RSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLA-VLLLLLLAA 419 (485)
T ss_pred HHHHHHHHHh--CCccHHHhcChHhhhHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHhchHHHHH-HHHHHHHHH
Confidence 9999888776 7788999999999999999999999999999999999999999999999877555443 344444443
Q ss_pred h
Q psy5224 904 K 904 (1178)
Q Consensus 904 ~ 904 (1178)
.
T Consensus 420 ~ 420 (485)
T PRK08676 420 S 420 (485)
T ss_pred H
Confidence 3
|
|
| >PRK08375 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=410.54 Aligned_cols=303 Identities=26% Similarity=0.486 Sum_probs=258.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|++||+++++++.++..++ ++++.|+++||+++|.+||.++++|+.++|..+|++|++++.+...
T Consensus 118 ~~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~gs~~~~~l~~~~~ 196 (487)
T PRK08375 118 GLLGALLTADLFNLFVFLEIMSLSSYALVAMGG-DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA 196 (487)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHhhhc
Confidence 445667899999999999999999999997764 4578999999999999999999999999999999999987754221
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh---hhHhHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLP---LVINWQ 746 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~---~~~~~~ 746 (1178)
+.+.......++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++ .+.|+.....+. ....++
T Consensus 197 ----~~~~~~~~~~l~~~g~~~K~~~~PfH~Wlp~a~~~ap~~~s~lls~~~~K~g~~-~l~r~~~~~~~~~~~~~~~~~ 271 (487)
T PRK08375 197 ----ENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY-ALIRIYFTVFGGDFRFALGLG 271 (487)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHhccchhhcccccCCCChHHHHHHHHHHHHHHHH-HHHHHHHHHhCccccccchHH
Confidence 11233455677888999999999999999999999999999999975 665554 556765443332 122345
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5224 747 KILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVI 826 (1178)
Q Consensus 747 ~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~ 826 (1178)
..+.++|++|+++|++.|++|+|+||++||||++|+||+++++...+. .+..++++|+++|.+.+..+|...
T Consensus 272 ~~l~~l~~~s~~~g~~~al~q~dlKrllAySSis~~G~i~~~l~~~~~--------~~~~~~~~~~~~h~~~k~~lFl~~ 343 (487)
T PRK08375 272 WLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTP--------LALAAGLLHLLHHALMKGALFLAA 343 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999999999999999875432 356788999999999999999999
Q ss_pred HHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-h
Q psy5224 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-G 905 (1178)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~ 905 (1178)
+.+.++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++++.++.+.++...++++++++++. |
T Consensus 344 g~i~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~~~~~~~l~s~l~~~y~ 421 (487)
T PRK08375 344 GAIEVTY--GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYF 421 (487)
T ss_pred HHHHHHh--CcccHHHccChhhhchHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 9888776 788999999999999999999999999999999999999999999999998877777777888999888 7
Q ss_pred hhhc
Q psy5224 906 GRII 909 (1178)
Q Consensus 906 ~r~~ 909 (1178)
.|+.
T Consensus 422 lr~~ 425 (487)
T PRK08375 422 LRIW 425 (487)
T ss_pred HHHH
Confidence 7876
|
|
| >MTH00198 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=402.66 Aligned_cols=305 Identities=34% Similarity=0.607 Sum_probs=249.5
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy5224 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNI--------FSSEAAIKYFILGILSSGFMLYGISILYGITGTL 660 (1178)
Q Consensus 589 g~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~--------~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~ 660 (1178)
+-+.+++++|+|++.+|+++|+++++++.++..+++++ ++.|+++||+++|++||.++|+|+.++|..+|++
T Consensus 198 ~lG~llliSS~dl~~lyl~lEl~sL~~yiLi~~~~~~~s~~~~~~~~s~eAglKYFIlqa~gS~~lL~Gi~lly~~tGs~ 277 (607)
T MTH00198 198 GLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGNTPPESGLKYWILGAMSSGFYLFGCALYFGFTGNE 277 (607)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34556677899999999999999999999997665543 2689999999999999999999999999999987
Q ss_pred chhhHHHH--hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 661 ELQSIFNV--IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCL 738 (1178)
Q Consensus 661 ~~~~~~~~--~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~ 738 (1178)
++.+.... ....+.+......+..++++|+++|+|++|||+|+||+|+++|+.+++++++++|++++.++.+..
T Consensus 278 ~~~~~i~~~~l~~~~~~~~~~~~~~llIligllfKlg~fPFH~WlPDVy~gaPt~vsalLstv~Ki~~~~lL~~l~---- 353 (607)
T MTH00198 278 GMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV---- 353 (607)
T ss_pred chhhhHhhhhhhhcccchhHHHHHHHHHHHHHHHHHhhcchhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 65321100 000111111223456778899999999999999999999999999999999999999998875431
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHH
Q psy5224 739 LPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA 818 (1178)
Q Consensus 739 ~~~~~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 818 (1178)
....++.+++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|++.|.++
T Consensus 354 -----~~~~lLlil~ilSmiiGai~AL~QtdIKRLLAYSSIsH~G~ILlgl~~~t~--------~gi~~~l~Yli~Y~i~ 420 (607)
T MTH00198 354 -----ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTY--------ESLQASWTYAVTYLVS 420 (607)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHH
Confidence 113467788999999999999999999999999999999999999865432 4667889999999999
Q ss_pred HHHHHHHHHHHhhccC---------------CCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHH
Q psy5224 819 ILGAFGVIILLKNNTC---------------NKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883 (1178)
Q Consensus 819 ~~~lf~~~~~~~~~~~---------------~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~ 883 (1178)
+..+|.++..++.... +..+++++++|+.+++|..+..+.+.++|++|+||+.||++||+++.++
T Consensus 421 ~l~lF~ii~~l~~~~~~~~t~~~~~~~~~~~~~i~~I~~L~Gl~~~~P~la~~f~I~lLSLAGIPPl~GF~~K~~Il~s~ 500 (607)
T MTH00198 421 ALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGS 500 (607)
T ss_pred HHHHHHHHHHHHhcCcccccccccccccccchHHHHHHHhhchhhhCHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHH
Confidence 9999987776654210 1124678889999999999999999999999999999999999999999
Q ss_pred Hhhc-------hHHHHHHHHHHHHHHHh-hhhhcc
Q psy5224 884 FETQ-------KIWLLLLIIMCSLIGAK-GGRIIK 910 (1178)
Q Consensus 884 ~~~~-------~~~l~~l~ll~s~~~~~-~~r~~~ 910 (1178)
++.+ .+++.++++++|+++++ |.|+++
T Consensus 501 i~~~~~~~~~~~~~Lali~IlsSvIS~~YYLRii~ 535 (607)
T MTH00198 501 IKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVA 535 (607)
T ss_pred HHhccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9843 46777788889999999 899973
|
|
| >TIGR01330 bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, HAL2 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=395.17 Aligned_cols=254 Identities=20% Similarity=0.319 Sum_probs=207.5
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccc---eEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC------
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELEN---LRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT------ 990 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~---~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~------ 990 (1178)
..++.+++++++|++.+++.+++... .++++|+++|+||++|+++|+.|++.|++.||++.|+|||++...
T Consensus 4 ~~l~~a~~~v~~A~~~~~~~~~~~~~~~~~~~~~K~d~d~VT~AD~~ve~~I~~~L~~~fP~~~ilgEE~~~~~~~~~~~ 83 (353)
T TIGR01330 4 RELDVATQAVRLASLLTKKVQSELISHKDSTVITKDDKSPVTVGDYGAQAIVINVLKSNFPDDPIVGEEDSSGLSEADFT 83 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccceeecCCCCCccHhhHHHHHHHHHHHHHHCCCCCEEecccCcccccchHH
Confidence 46889999999999999988765332 457889999999999999999999999999999999999975310
Q ss_pred ------------------------------------------CCCCccEEEEeccCCchHHhccCCCeEEEEEEEECCeE
Q psy5224 991 ------------------------------------------NFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQI 1028 (1178)
Q Consensus 991 ------------------------------------------~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~p 1028 (1178)
..+++++|+|||||||+||++| +.|||+||+.++|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WvIDPIDGT~nFv~G-~~~avsIaL~~~G~p 162 (353)
T TIGR01330 84 LGRVNELVNETLVYAKNYKKDDQFPLKSLEDVLQIIDFGNYEGGRKGRHWVLDPIDGTKGFLRG-DQYAVCLALIENGKV 162 (353)
T ss_pred HHHHHHHHhhhhhcccccccccccccCCHHHHHHhhhccCcCCCCCCCeEEEcCccCchhhhcC-CceEEEEEEEECCEE
Confidence 1135678999999999999999 799999999999999
Q ss_pred EEEEEEecCC----------------CcEEEEecCCceEE--------cCeecccCCCCCCCCcEEEeccCCCCCCChHH
Q psy5224 1029 THSVIYDPIR----------------NDLFTAIKGCGAYL--------NEKRIRVNKRNKINDALIGTDFSFKNNINSEE 1084 (1178)
Q Consensus 1029 v~gvV~~P~~----------------~~~~~a~~g~ga~~--------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1084 (1178)
++||||+|.. |++|+|.+|+|+|+ |++|++++..++++++.+......... ....
T Consensus 163 v~GVV~~P~~~~~~~~~~~~~~~~~~g~~~~A~~G~Ga~~~~~~~~~~~~~~i~vs~~~~~~~a~v~~~~~~~~~-~~~~ 241 (353)
T TIGR01330 163 VLGVIGCPNLPLSSYGAQNLKGSESKGCIFRAVRGSGAFMYSLSSDAESPTKVHVSSVKDTKDAIFCEGVEKGHS-SHDE 241 (353)
T ss_pred EEEEEecCCccccccccccccccccCCcEEEEecCcceEEecccCCCCCceeeecCCCCCcccCEEEEEeccCCC-chhH
Confidence 9999999985 99999999999997 568999988888888877665432221 1222
Q ss_pred HHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC------CccchHHHHHHHHHcCCcccccCCCCCCCCC---
Q psy5224 1085 YAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL------KPWNIAAGSLLIIESGGIISNFKGEKNYLYT--- 1155 (1178)
Q Consensus 1085 ~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~------~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~--- 1155 (1178)
.....+......+.++.|| ++++|+||+|++|+|++.+. ++||+|||.+|++||||.++|++|+|..+++
T Consensus 242 ~~~~~~~~~~~~~~~r~gs-~~~~~~VA~G~~D~~v~~~~~~~~~~~~WD~AAg~lIv~EAGG~vtd~~G~~~~~~~~~~ 320 (353)
T TIGR01330 242 QTAIANKLGISKSPLRLDS-QAKYAALARGDADVYLRLPIKLSYQEKIWDHAAGNVIVEEAGGIVTDAMGKPLDFGKGRT 320 (353)
T ss_pred HHHHHHHcCCCcCceecch-HHHHHHHHcCCccEEEecCccccCCCCccccchHHHHHHhcCCeEECCCCCccCCCCccc
Confidence 2222233333344456676 57999999999999998764 6899999999999999999999999866543
Q ss_pred ----CcEEEeC--hHHHHHHHHHHhhh
Q psy5224 1156 ----GDIVAGN--QKIFSQIISLINLN 1176 (1178)
Q Consensus 1156 ----~~iva~~--~~l~~~l~~~l~~~ 1176 (1178)
.++++++ +.+|++++++++++
T Consensus 321 ~~~~~g~Iaa~~~~~lh~~~~~~~~~~ 347 (353)
T TIGR01330 321 LALDKGVIAASGPRVLHDLVVSTSCDS 347 (353)
T ss_pred cccCceEEEECCHHHHHHHHHHHHHHH
Confidence 5667766 89999999999874
|
Some members of this family are active also as inositol 1-monophosphatase. |
| >PRK12561 NAD(P)H-quinone oxidoreductase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=405.46 Aligned_cols=303 Identities=22% Similarity=0.293 Sum_probs=252.7
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHH--HHhhccccchhhHHHH
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISI--LYGITGTLELQSIFNV 668 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~l--l~~~~gs~~~~~~~~~ 668 (1178)
+......++|++.+|++||++++++|.++..++++ ++.++++||++++.+||.++++|.+. .|..+|++|++++...
T Consensus 99 ~~~~~~~s~dl~~~~v~~El~~l~~~~LI~~~~~~-~~~~aa~ky~i~~~~gs~~lL~~~i~l~~~~~~~t~~~~~l~~~ 177 (504)
T PRK12561 99 AQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAK 177 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHhh
Confidence 44556779999999999999999999999877765 57899999999999999999998543 4566678888766431
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
..+.....+...++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+.....+.....+..
T Consensus 178 ----~~~~~~~~~~~~~ll~gf~~K~~~fPfH~WLPda~~~aPt~vSalLsgvl~K~g~y~-l~R~~~~~~~~~~~~~~~ 252 (504)
T PRK12561 178 ----SYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYA-LIRFNVQMLPDAHVYFAP 252 (504)
T ss_pred ----ccchhHHHHHHHHHHHHHHHhcCCCCceehhcchhccCCchHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHH
Confidence 112222334455678899999999999999999999999999999996 57777665 668765444433334556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++.+.+. .+..++++|+++|.+.+..+|+..+
T Consensus 253 ~l~~lg~~s~l~gal~al~Q~dlKrlLAYSSIshmG~il~gi~~~~~--------~g~~ga~~~~l~H~l~k~~lF~~~g 324 (504)
T PRK12561 253 ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTD--------LGISGAMLQMISHGLIAAALFFLTG 324 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999865432 3667899999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH------HHHHHHHHHHHH
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI------WLLLLIIMCSLI 901 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~------~l~~l~ll~s~~ 901 (1178)
.+.++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+.+ +...+.++++++
T Consensus 325 ~i~~~~--~t~~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~GF~sk~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l 402 (504)
T PRK12561 325 VTYERT--HTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGLIL 402 (504)
T ss_pred HHHHHh--CCeeHHHhCChHHHhHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHH
Confidence 988776 788999999999999999999999999999999999999999999999997643 345566788888
Q ss_pred HHh-hhhhc
Q psy5224 902 GAK-GGRII 909 (1178)
Q Consensus 902 ~~~-~~r~~ 909 (1178)
++. |.|+.
T Consensus 403 s~~Y~lr~~ 411 (504)
T PRK12561 403 TPIYLLSML 411 (504)
T ss_pred HHHHHHHHH
Confidence 888 67776
|
|
| >cd01638 CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-43 Score=382.35 Aligned_cols=228 Identities=23% Similarity=0.326 Sum_probs=195.8
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC-CCCccEEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN-FENENIWI 999 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~-~~~~~~wv 999 (1178)
+++.+.+++++|++.+++.+++. ..+++|+++|+||++|+++|+.+++.|++.+|++.++|||++.... .+++++|+
T Consensus 1 ~~~~a~~~a~~a~~~~~~~~~~~--~~~~~k~~~d~vt~aD~~~e~~i~~~L~~~~P~~~i~gEE~~~~~~~~~~~~~Wv 78 (242)
T cd01638 1 LLELLIRIAREAGDAILEVYRGG--FTVERKEDGSPVTAADLAANAFIVEGLAALRPDIPVLSEESADDPLRLGWDRFWL 78 (242)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC--CcEEECCCcCcccHHHHHHHHHHHHHHHHhCCCCcEEcCCCCCccccccCCEEEE
Confidence 36789999999999999887653 3366788999999999999999999999999999999999876433 25679999
Q ss_pred EeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCC---CCCCCcEEEeccCC
Q psy5224 1000 IDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKR---NKINDALIGTDFSF 1076 (1178)
Q Consensus 1000 IDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~---~~~~~~~~~~~~~~ 1076 (1178)
|||||||+||++|.|.||+++|+.++|+|++||||+|.+||+|+|.+|+|+|+|++|+++++. ++.++..+.++.+.
T Consensus 79 iDPIDGT~Nfv~g~p~~~isial~~~g~pv~gvi~~P~~~~~~~A~~G~Ga~~n~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (242)
T cd01638 79 VDPLDGTREFIKGNGEFAVNIALVEDGRPVLGVVYAPALGELYYALRGGGAYKNGRPGAVSLQARPPPLQPLRVVASRSH 158 (242)
T ss_pred EecccChHHHhcCCCCeEEEEEEEECCEEEEEEEecCCCCCEEEEEcCCceeecCCCCccccccccCCCCceEEEEecCc
Confidence 999999999999999999999999999999999999999999999999999999999988765 56666777665432
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC-CccchHHHHHHHHHcCCcccccCCCCCCCCC
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNFKGEKNYLYT 1155 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~-~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~ 1155 (1178)
. ....... .......++|+.|| ++++|+||+|++|+|++.+. ++||+|||.+|++||||.++|.+|+|..+.+
T Consensus 159 ~----~~~~~~~-~~~~~~~~~r~~Gs-~l~~~~vA~G~~D~~i~~~~~~~wD~aAg~li~~eaGG~vtd~~G~~~~~~~ 232 (242)
T cd01638 159 P----DEELEAL-LAALGVAEVVSIGS-SLKFCLVAEGEADIYPRLGPTMEWDTAAGDAVLRAAGGAVSDLDGSPLTYNR 232 (242)
T ss_pred C----CHHHHHH-HHhcCccceeeCch-HHHHHHHhcCCcCEEeccCCCchhhHHHHHHHHHHCCCcEEcCCCCccccCC
Confidence 1 1222222 33445678999999 99999999999999999887 9999999999999999999999999976554
Q ss_pred C
Q psy5224 1156 G 1156 (1178)
Q Consensus 1156 ~ 1156 (1178)
.
T Consensus 233 ~ 233 (242)
T cd01638 233 E 233 (242)
T ss_pred C
Confidence 3
|
It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation). |
| >PRK12665 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=406.95 Aligned_cols=304 Identities=22% Similarity=0.404 Sum_probs=254.8
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||++++++|.++..+ +++++.++++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 123 g~~~~~~s~dl~~~~vf~El~~l~~~~Li~~~-~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~Gs~~~~~l~~~~~ 201 (521)
T PRK12665 123 GVSNAFLAGDLFNLYVGFEILLVASYVLLTLG-ATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLD 201 (521)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCHHHHHHHHh
Confidence 33455678999999999999999999999765 44568999999999999999999999999999999999987754221
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
+.++........++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....+.. .+..++.
T Consensus 202 --~~~~~~~~~~~~l~~~g~~~K~glfPfH~WlP~a~~~ap~~~salls~~~~K~g~y~l~R~~~~~~~~~--~~~~~l~ 277 (521)
T PRK12665 202 --ELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG--GLDTLLM 277 (521)
T ss_pred --cCChhHHHHHHHHHHHHHHHHcCCcchheehhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHhcCch--hHHHHHH
Confidence 223333445567788899999999999999999999999999998987644444555667654433321 2456788
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.+.
T Consensus 278 ~lg~~s~i~g~~~al~q~dlKrlLAYSSI~~~G~illgl~~~~~--------~~~~gal~~~~~H~~~k~~LFl~~g~i~ 349 (521)
T PRK12665 278 VVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTV--------AGLSGAIYYVAHHITVQTTLFLVVGLIE 349 (521)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999998865432 3567889999999999999999999888
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHH---HHHHHHHHHHHHHh-hh
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW---LLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~---l~~l~ll~s~~~~~-~~ 906 (1178)
++. +++++++++|+.+++|.....+.++.+|++|+||+.||++||.++++.++.+.+. +.+.++++|++++. |.
T Consensus 350 ~~~--g~~~i~~l~Gl~~~~P~~~~~f~i~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~ll~s~~~l~~~~ 427 (521)
T PRK12665 350 RQA--GSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLYAVA 427 (521)
T ss_pred Hhc--CcccHHHhcChhhhhHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 776 7889999999999999999999999999999999999999999999999877543 33455778888888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 428 r~~ 430 (521)
T PRK12665 428 RVW 430 (521)
T ss_pred HHH
Confidence 876
|
|
| >MTH00044 ND4 NADH dehydrogenase subunit 4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=399.74 Aligned_cols=306 Identities=21% Similarity=0.307 Sum_probs=257.4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|+++|+++++++.++..|+.++++.||+.||++++.+||.+++.|+..+|..+|++++++.....+
T Consensus 106 ~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~~~~~~~~A~~~fli~~~~~s~~lL~gi~~ly~~~g~~~~~~~~~~~~ 185 (458)
T MTH00044 106 ALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWL 185 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHhc
Confidence 34555788999999999999999999999877777778999999999999999999999999999999999976643211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
+..+.........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+.....++....+...+
T Consensus 186 -~~~~~~~~~~~~~l~l~gf~~K~~~~PfH~WlPda~~~ap~~~s~lLag~l~K~g~y~-liR~~~~~~~~~~~~~~~~l 263 (458)
T MTH00044 186 -TSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYG-LIRLINLFSLPSANNISFIL 263 (458)
T ss_pred -ccCChHHHHHHHHHHHHHHHHhcchhhhhccCcHHhhhCChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHHHH
Confidence 1112223344456778899999999999999999999999999999986 48888776 55765433222223345677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..++++++++|++.|++|+|+||++|||||+|+||+++++...+ ..+..++++|+++|++.+..+|...+.+
T Consensus 264 ~~l~~~s~l~g~l~al~Q~dlKrllAYSSIshmG~il~g~~~~~--------~~~~~g~~~~~i~H~l~~~~lF~~~g~i 335 (458)
T MTH00044 264 IVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGT--------NWGINGALILMIAHGLVSSALFCLANIL 335 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999986543 2467889999999999999999999998
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
++++ +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+. +...+..+++++++. |.|+
T Consensus 336 ~~~~--~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~ 412 (458)
T MTH00044 336 YERS--GTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSI-LSFPIIGLATVFGAIYSLLI 412 (458)
T ss_pred HHHh--CCEeHHHhCChHhHhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 8876 78899999999999999999999999999999999999999999999998765 455566788888888 6777
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 413 ~ 413 (458)
T MTH00044 413 Y 413 (458)
T ss_pred H
Confidence 5
|
|
| >PRK10931 adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=381.12 Aligned_cols=226 Identities=22% Similarity=0.310 Sum_probs=185.6
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--CCCCccEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--NFENENIW 998 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~~~~~~~w 998 (1178)
+++.+.+++++|++.+++.+++.+..++++|+++|+||++|+++|+.|++.|++.+|++.++|||+++.. ..+.+++|
T Consensus 1 ~l~~a~~~a~~ag~~i~~~~~~~~~~~~~~k~~~d~vT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~~~~W 80 (246)
T PRK10931 1 MLEQICQLARNAGDAIMQVYDGTKPLDVASKADDSPVTAADIAAHTVIKDGLRTLTPDIPVLSEEDPPAWEVRQHWQRYW 80 (246)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCcceEEcCCCCcccHHHHHHHHHHHHHHHHHCCCCCEEeCCCCccccccCCCccEE
Confidence 4678999999999999988765455777889999999999999999999999999999999999987422 23345789
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEE--cCee--cccCCCCCCCCcEEEecc
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYL--NEKR--IRVNKRNKINDALIGTDF 1074 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~--n~~~--~~~~~~~~~~~~~~~~~~ 1074 (1178)
+|||||||+||++|.|.||++||+.++|+|++||||+|.+||+|+|.+|+ +++ ||++ +++++.+ +..+.++.
T Consensus 81 iIDPIDGT~nF~~g~p~~~vsIal~~~g~p~~GvV~~P~~~~~y~A~~g~-a~~~~ng~~~~i~~~~~~---~~~v~~~~ 156 (246)
T PRK10931 81 LVDPLDGTKEFIKRNGEFTVNIALIEQGKPVLGVVYAPVMNVMYSAAEGK-AWKEECGVRKQIQVRDAR---PPLVVISR 156 (246)
T ss_pred EEecCcChHHHHcCCCCEEEEEEEEECCEEEEEEEeecCCCCEEEEECCe-EEEcCCCCeeeeeccCCC---CcEEEEEC
Confidence 99999999999999999999999999999999999999999999999996 664 8864 4444332 33555554
Q ss_pred CCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC-CccchHHHHHHHHHcCCcccccCCCCCCC
Q psy5224 1075 SFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNFKGEKNYL 1153 (1178)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~-~~wD~aA~~~i~~eaGg~v~d~~G~~~~~ 1153 (1178)
+.. ++......+... ..++|+.|| ++++|+||+|++|+|++.+. ++||+|||.+|++||||.++|.+|+|..+
T Consensus 157 ~~~----~~~~~~~~~~~~-~~~~r~~Gs-al~l~~VA~G~~D~~~~~~~~~~WD~aAg~~i~~eaGg~vtd~~G~~~~~ 230 (246)
T PRK10931 157 SHA----DAELKEYLQQLG-EHQTTSIGS-SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAIAAGAHVHDWQGKTLDY 230 (246)
T ss_pred CCC----CHHHHHHHHHcC-CcceeEcch-HHHHHHHHcCCCCEEecCCCCCchhhhHHHHHHHHCCCcEECCCCCcccc
Confidence 321 222333333332 235688898 79999999999999999884 78999999999999999999999999776
Q ss_pred CCC
Q psy5224 1154 YTG 1156 (1178)
Q Consensus 1154 ~~~ 1156 (1178)
++.
T Consensus 231 ~~~ 233 (246)
T PRK10931 231 TPR 233 (246)
T ss_pred CCc
Confidence 654
|
|
| >CHL00011 ndhD NADH dehydrogenase subunit 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=403.76 Aligned_cols=304 Identities=22% Similarity=0.296 Sum_probs=253.8
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-hccccchhhHHH
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISIL--YG-ITGTLELQSIFN 667 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll--~~-~~gs~~~~~~~~ 667 (1178)
+......++|++.+|++||++++++|.++..++++ ++.|+++||++++.+||.++++|+... |. .+|++|++++.+
T Consensus 124 ~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~~~-~~~~aa~ky~i~~~~gs~~lL~gi~~~~~y~~~~gs~~~~~l~~ 202 (498)
T CHL00011 124 GQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLAN 202 (498)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHh
Confidence 34556789999999999999999999999877654 678999999999999999999998753 54 348999877643
Q ss_pred HhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 668 VIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 668 ~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
. ..+.....+...++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....+.....+++
T Consensus 203 ~----~~~~~~~~~~~~~~l~gf~~K~~~fPfH~WLP~a~~~ap~~~s~llsgv~~K~g~y~l~R~~~~~~~~~~~~~~~ 278 (498)
T CHL00011 203 Q----SYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSP 278 (498)
T ss_pred h----ccchhHHHHHHHHHHHHHHHhcCeeccccccchhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Confidence 1 112212223445678899999999999999999999999999999998855555556668765444433334567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+ +.+..++++|+++|.+.+..+|...+
T Consensus 279 ~l~~l~~is~~~g~~~al~Q~d~KrllAYSSIshmG~il~~~~~~~--------~~~~~g~l~~~~~h~l~k~~lFl~~g 350 (498)
T CHL00011 279 WLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSIT--------DTGLNGAILQIISHGFIGAALFFLAG 350 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHhHHHHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999999999999999999999999999999987543 24667899999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHH------HHHHHHHHHHH
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW------LLLLIIMCSLI 901 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~------l~~l~ll~s~~ 901 (1178)
.++++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+.++.+.++ ...+.++++++
T Consensus 351 ~~~~~~--gt~~i~~l~Gl~~~~P~~~~~~~i~~ls~~GiPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 428 (498)
T CHL00011 351 TSYDRI--RLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAIGMIL 428 (498)
T ss_pred HHHHHH--CCeeHHHhCChHHHhHHHHHHHHHHHHHHHhcChhchHHHHHHHHHHHHHhCcchhhhHHHHHHHHHHHHHH
Confidence 888776 7889999999999999999999999999999999999999999999999987653 44566788888
Q ss_pred HHh-hhhhc
Q psy5224 902 GAK-GGRII 909 (1178)
Q Consensus 902 ~~~-~~r~~ 909 (1178)
++. |.|++
T Consensus 429 s~~Y~l~~~ 437 (498)
T CHL00011 429 TPIYLLSML 437 (498)
T ss_pred HHHHHHHHH
Confidence 888 68886
|
|
| >TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase, chain M | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=403.02 Aligned_cols=302 Identities=25% Similarity=0.411 Sum_probs=253.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||+++++++.++..++ ++++.|+++||+++|.+||.++++|+.++|..+|++++.++...
T Consensus 117 ~~~~~~~s~dl~~~~v~~E~~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~g~~~~~~l~~~-- 193 (479)
T TIGR01972 117 GVIGVFAALDLLLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGTFDLLELINL-- 193 (479)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHhc--
Confidence 445567899999999999999999999997765 44678999999999999999999999999999999999876432
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls-~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
..++....+...++++|+++|+|++|||.|+||+|+++|++++++++ +.+|.+++. +.|+.....+.....+...+
T Consensus 194 --~~~~~~~~~~~~l~~~g~~~K~~~~PfH~Wlp~a~~~ap~~~salls~~~~K~g~~~-l~r~~~~~~~~~~~~~~~~l 270 (479)
T TIGR01972 194 --PLPFSVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYG-FLRFNLPLFPDASLYFAPVL 270 (479)
T ss_pred --cCChhHHHHHHHHHHHHHHHhcCcccceecChhhhhhCChhHHHHHHHHHHHHHHHH-HHHHHHHhhhHHHHHHHHHH
Confidence 12222334455678889999999999999999999999999999995 567887776 45765443333233455678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++|||||+|+||+++++..... .+..++++|+++|.+.+..+|...+.+
T Consensus 271 ~~l~~~s~~~g~~~al~q~d~KrllAySSIs~~G~i~~~l~~~~~--------~~~~~~l~~~~~h~~~k~~lF~~~g~i 342 (479)
T TIGR01972 271 AALAVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE--------LGISGAVFQMISHGLITAALFLLVGVL 342 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999998865322 356788999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
+++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.++.+ ++...+.+++++++.. |.|+
T Consensus 343 ~~~~--~~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~GiPP~~GF~sK~~i~~~~~~~~-~~~~~~~~~~s~ls~~y~l~~ 419 (479)
T TIGR01972 343 YDRA--HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGAFKVN-PVVAFLAALGIVLTAAYMLWL 419 (479)
T ss_pred HHHh--CceeHHHhCCHHHHhhHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHH
Confidence 8775 7889999999999999999999999999999999999999999999999866 4445556667777776 5665
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 420 ~ 420 (479)
T TIGR01972 420 Y 420 (479)
T ss_pred H
Confidence 4
|
This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. |
| >COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=397.12 Aligned_cols=334 Identities=26% Similarity=0.425 Sum_probs=279.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhh----hhhh-------hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHH
Q psy5224 565 GVLTSTALIFSAAYSLCLSKN----IIFV-------LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633 (1178)
Q Consensus 565 ~~~~~~~~~ls~~y~l~~~~~----~~~g-------~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~ 633 (1178)
.+...+..+++.+|..+..++ ..+. -+....+.++|++++|+++|+++++++.++...++++++.++++
T Consensus 81 ~l~~~lv~~~~~iys~~~~~~~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei~~isS~~Li~~~g~~~~~~~a~~ 160 (504)
T COG0651 81 LLIIALVGLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVAHYGGRRRQASAGF 160 (504)
T ss_pred HHHHHHHHHHHHHHhHHHHhcccccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCchHhhhhhh
Confidence 344444555667777766663 1111 23445577899999999999999999999987677777789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHH
Q psy5224 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASII 713 (1178)
Q Consensus 634 kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~ 713 (1178)
||++++.+|+.+++.|+.++|..+||+|++++...... +.++........++++|+++|.|++|+|.|+||+|.++|++
T Consensus 161 ~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~-~~~~~~~~~~~~L~ligf~~KaglfPlh~WLP~A~~~ap~p 239 (504)
T COG0651 161 KYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSS-ELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSP 239 (504)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHhCcccHHHHHHHhhc-ccCchHHHHHHHHHHHHHHHhcccCchhhhhhhhhccCCcH
Confidence 99999999999999999999999999999998875432 33445666778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhh--HhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHh
Q psy5224 714 ITLLLSTTPKLSLFVIIYRLLIKCLLPLV--INWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791 (1178)
Q Consensus 714 ~~~lls~~~k~~~~~~l~~~~~~~~~~~~--~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~ 791 (1178)
+++++|++..+.+.|.+.|+....++... ..+..++...|.+|+++|+++++.|+|+||++||||++|+||+++++..
T Consensus 240 vSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlLAYsti~q~G~illg~~i 319 (504)
T COG0651 240 VSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYILLGLGI 319 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988666557778888766655443 3567889999999999999999999999999999999999999999976
Q ss_pred hhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCcc
Q psy5224 792 IKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTI 871 (1178)
Q Consensus 792 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~ 871 (1178)
.+. .+..++++|.++|.+.|..+|+..+.+..++ +++++++++|+.+++|.+...+.++.+|++|+||+.
T Consensus 320 g~~--------~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~--g~~~i~~~gGl~~~~P~~~~~~~i~~lsl~GlPp~~ 389 (504)
T COG0651 320 GTP--------LGLAGAIFHLLNHALVKALLFLGAGAVLYRT--GTRDLEKLGGLAKRMPLTAVAFLIGALSLAGLPPFN 389 (504)
T ss_pred cCh--------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh--CCCcHHHhcChHhhChHHHHHHHHHHHHHcCCCCcc
Confidence 544 2468899999999999999999999888777 789999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHH-----hhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 872 GFYAKFFIFEKIF-----ETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 872 gF~~K~~i~~~~~-----~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
||++||+++++.. +...+++..++++.+..... +.|..
T Consensus 390 GF~sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 433 (504)
T COG0651 390 GFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIF 433 (504)
T ss_pred cHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999955 44445666666777776666 44444
|
|
| >PRK05846 NADH:ubiquinone oxidoreductase subunit M; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=401.19 Aligned_cols=302 Identities=24% Similarity=0.382 Sum_probs=251.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----hccccchhhHH
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYG----ITGTLELQSIF 666 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~----~~gs~~~~~~~ 666 (1178)
+......|+|++.+|++||+++++++.++..+++ +++.|+++||+++|.+||.++++|+.++|. .+|++|+.++.
T Consensus 123 ~~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~~-~~~~~aa~ky~i~~~vgs~~lL~g~~~l~~~~~~~~gs~~~~~~~ 201 (497)
T PRK05846 123 GVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLL 201 (497)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 4566678999999999999999999999977664 568999999999999999999999999988 78999998764
Q ss_pred HHhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhH
Q psy5224 667 NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINW 745 (1178)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~ 745 (1178)
. .+.+.........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+.....+.....+
T Consensus 202 ~----~~~~~~~~~~~~~l~~~g~~~K~~~~PfH~Wlp~a~~~ap~~~s~lls~~~~K~g~~~-l~r~~~~~~~~~~~~~ 276 (497)
T PRK05846 202 N----LPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYG-LLRFSLPLFPDASHEF 276 (497)
T ss_pred h----ccCChHHHHHHHHHHHHHHHHhCCCcCceecchhhhccCChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3 1122222334445678899999999999999999999999999999996 57877775 5576544433323345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 746 ~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
..++..+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|..
T Consensus 277 ~~~l~~l~~~s~~~g~~~al~q~dlKrlLAySSIsq~G~i~~~l~~~~~--------~~~~~~l~~~~~h~l~k~~lF~~ 348 (497)
T PRK05846 277 APIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQ--------LGIQGAIFQMISHGLSSAALFLL 348 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999998865432 35678899999999999999999
Q ss_pred HHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-
Q psy5224 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK- 904 (1178)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~- 904 (1178)
.+.+.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.++.+. +...+.+++++++..
T Consensus 349 ~g~i~~~~--g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~GiPP~~GF~~K~~i~~~~~~~~~-~~~~~~~~~~~ls~~y 425 (497)
T PRK05846 349 VGVLYDRL--HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP-VIAFIATTGLILAAVY 425 (497)
T ss_pred HHHHHHHh--CCccHHHhCCHHHhhHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHH
Confidence 99998876 78889999999999999999999999999999999999999999999998764 444444556666655
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
+.|+.
T Consensus 426 ~l~~~ 430 (497)
T PRK05846 426 SLWLY 430 (497)
T ss_pred HHHHH
Confidence 34443
|
|
| >MTH00205 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=392.03 Aligned_cols=302 Identities=18% Similarity=0.298 Sum_probs=253.4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+++++++.++..|+.++++.||++||++++.+||.++++|+..+|..+|++|+.++.+. .
T Consensus 100 ~~~~~~~s~dl~~~yv~~El~~i~~~~Li~~~g~~~~~~~Aa~~~li~~~~~s~~lL~gi~~ly~~~gsl~~~~l~~~-~ 178 (448)
T MTH00205 100 ILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPL-N 178 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHh-c
Confidence 345557899999999999999999999997777777899999999999999999999999999999999999877541 1
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.+.........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++. +.|+..... +....+...+
T Consensus 179 ---~~~~~~~~~~~l~l~gf~vK~~l~PfH~WLP~a~~~AP~~~s~iLagvl~K~g~y~-liR~~~~~~-~~~~~~~~~l 253 (448)
T MTH00205 179 ---FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG-LIRITSMLY-KLNSNFSELF 253 (448)
T ss_pred ---cchhHHHHHHHHHHHHHHHHhchhhhhhcChhhhccCChHHHHHHHHHHHHHHHHH-HHHHHHHHh-hhHHHHHHHH
Confidence 11122334456678899999999999999999999999999999986 58888776 567754432 2223345677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+..
T Consensus 254 ~~l~~~s~~~g~l~al~Q~dlKrllAYSSIshmG~il~gi~~~~~--------~g~~gal~~~~~H~~~k~~lF~~~g~i 325 (448)
T MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTS--------WGMNGAIIMMVAHGLCSSGMFALANVN 325 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999875432 467889999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
++++ +++++++++|+.+++|..+..+.+..++++|+||+.||++|++++.+.++.+.++. .++.+++++++. +.|+
T Consensus 326 ~~~~--~tr~i~~l~Gl~~~~P~~~~~~~l~~~~~~g~PP~~gF~se~~i~~~~~~~~~~~~-~~~~~~~~l~~~y~l~~ 402 (448)
T MTH00205 326 YERT--NSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISG-IPLSLISFLSGAYSLYL 402 (448)
T ss_pred HHHh--CceeHHHcCCCcccchHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHH
Confidence 7765 77899999999999999999999999999999999999999999999999876554 444555666666 3555
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 403 ~ 403 (448)
T MTH00205 403 Y 403 (448)
T ss_pred H
Confidence 3
|
|
| >MTH00124 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=393.47 Aligned_cols=305 Identities=21% Similarity=0.251 Sum_probs=255.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+++++++.++..|++++++.+|+.||++++..||.+++.|+..+|..+|++|+.++.....
T Consensus 105 ~~~~~~~s~dl~~~yv~~E~~~i~~~~Li~~~~~~~~~~~A~~y~~~~t~~gs~~lL~~i~~ly~~~gs~~~~~~~~~~~ 184 (457)
T MTH00124 105 FLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHP 184 (457)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHhhh
Confidence 44556789999999999999999999999888887778899998888899999999999999999999999987754211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
. ..++........++++|+++|+|++|||.|+||+|+++|+++++++++ .+|.+++. +.|+.....+. ...+...+
T Consensus 185 ~-~~~~~~~~~~~~~~l~gf~~K~~~~PfH~WlP~a~~~aP~~~s~llag~~~K~g~yg-liR~~~~~~~~-~~~~~~~l 261 (457)
T MTH00124 185 T-LTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYG-IIRITLLLPPL-SNTLHYPF 261 (457)
T ss_pred c-cCCchHHHHHHHHHHHHHHHhcccchhhhcCchhhhcCChHHHHHHHHHHHHhhHHH-HHHHHHHhhhh-HHHHHHHH
Confidence 0 011112223345577899999999999999999999999999999998 57777776 66875543322 22334456
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+.++|...+..
T Consensus 262 ~~l~~~s~l~g~l~al~Q~dlKrllAYSSIshmG~i~~g~~~~~~--------~g~~gal~~~i~H~l~~~~lF~~~g~~ 333 (457)
T MTH00124 262 LTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTP--------WSLSGAMILMIAHGLTSSMLFCLANTN 333 (457)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHhhHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999875432 467889999999999999999988888
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.++. +++++++++|+.+++|..+..+.++.++++|+||+.||++|+.++.+.++.+.++. .+..+++++++. |.|+
T Consensus 334 ~~~~--~tr~i~~~~Gl~~~~P~~~~~~~i~~l~~~G~Pp~~gF~~k~~i~~~~~~~~~~~~-~~~~l~s~ls~~y~l~~ 410 (457)
T MTH00124 334 YERT--HSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTI-ILTGLATLITASYTLYM 410 (457)
T ss_pred HHHh--CCchHHHhCChHHHhHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHH
Confidence 7776 77889999999999999999999999999999999999999999999999775544 567788899888 6787
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 411 ~ 411 (457)
T MTH00124 411 F 411 (457)
T ss_pred H
Confidence 5
|
|
| >MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=393.47 Aligned_cols=302 Identities=21% Similarity=0.282 Sum_probs=255.8
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+++++++.++..|++++++.+|+.||++++.+|+.+++.|+..+|..+|++|+.++....
T Consensus 104 ~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~~~~~~~~A~~~~li~~~~~s~~ll~~i~~ly~~~gs~~~~~~~~~~- 182 (450)
T MTH00206 104 FLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSK- 182 (450)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHhcc-
Confidence 3445578999999999999999999999988888778999999999999999999999999999999999987764321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.++........++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++.+ .|+.....+. ...+...+
T Consensus 183 ---~~~~~~~~~~~~~~~gf~~K~~~~PfH~WLP~a~~~ap~~~s~llagvl~K~g~ygl-~R~~~~~~~~-~~~~~~~l 257 (450)
T MTH00206 183 ---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGM-MRIILILGPS-TKLSSYFF 257 (450)
T ss_pred ---cchhhHHHHHHHHHHHHHHHcccchhheeCchhhhcCCchHHHHHHHHHHHhhHHHH-HHHHHHHhHH-HHHHHHHH
Confidence 112233445677889999999999999999999999999999999865 77777665 5775443332 22344567
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.++|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.+
T Consensus 258 ~~l~~~s~~~g~l~al~Q~dlKrllAYSSIshmG~i~~gl~~~~~--------~g~~ga~~~~i~H~l~k~~lF~~~g~i 329 (450)
T MTH00206 258 IILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSP--------WGFKGALLLMIAHGLVSSALFCLANLL 329 (450)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 789999999999999999999999999999999999999876432 466889999999999999999999999
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
+++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|++++.+..+.+.+ ...++.+++++++. +.|+
T Consensus 330 ~~~~--~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~y~l~~ 406 (450)
T MTH00206 330 YERS--HTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNF-TLPLLGLGFLFTAIYSLYM 406 (450)
T ss_pred HHhc--cchhHHHhCChHHhhHHHHHHHHHHHHHHcCCCCcCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 8876 788999999999999999999999999999999999999999999999997654 44456667788877 4666
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 407 ~ 407 (450)
T MTH00206 407 F 407 (450)
T ss_pred H
Confidence 4
|
|
| >PRK12666 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=399.63 Aligned_cols=309 Identities=21% Similarity=0.365 Sum_probs=249.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||++++++|.++..+ +++++.|+++||+++|.+||.++++|+.++|..+|+++++++.....
T Consensus 121 g~~g~~~s~dl~~~~v~~El~~l~~~~Li~~~-~~~~~~~aa~kY~i~~~vgs~~lL~gi~~ly~~~gs~~~~~l~~~~~ 199 (528)
T PRK12666 121 GLNGAFLTGDLFNLFVFFEVLLAASYGLLLHG-SGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIA 199 (528)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 34455778999999999999999999998655 45678999999999999999999999999999999999987754321
Q ss_pred h-ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----hhHhH
Q psy5224 671 L-NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP----LVINW 745 (1178)
Q Consensus 671 ~-~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~----~~~~~ 745 (1178)
. .+........+..++++|+++|+|++|||.|+||+|+++|+++++++++.+|.+++.+ .|+.....++ ....+
T Consensus 200 ~~~~~~~~~~~~~~~l~l~gf~~K~g~fPfH~WlPda~~~ap~~vsalls~~~K~g~y~l-~r~~~~~~~~~~~~~~~~~ 278 (528)
T PRK12666 200 QLPAADRALLEAGAALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFAIMTKVGIYAI-LRLSTLLFGPEAGASAGFG 278 (528)
T ss_pred ccCccchhHHHHHHHHHHHHHHHHhhhccchhccccccccCChHHHHHHHHHHHHHHHHH-HHHHHHHcccchhhhhhHH
Confidence 1 1111122234456788999999999999999999999999999999998888877765 5765544332 11234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 746 ~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
..++.++|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+.
T Consensus 279 ~~~l~~lg~ls~i~g~l~al~Q~dlKrlLAYSSIsq~G~illg~~~~~~--------~~~~gal~~~i~h~~~k~~LFl~ 350 (528)
T PRK12666 279 QDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNP--------AATAAALYYLVHSTLAAAALFLL 350 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999875432 35678899999999999999999
Q ss_pred HHHHhhccCCCC-----------chhhhhhhhcccCh----HHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch--
Q psy5224 826 IILLKNNTCNKT-----------DELDIFIGLHQRNP----WCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-- 888 (1178)
Q Consensus 826 ~~~~~~~~~~~~-----------~~~~~~~gl~~~~p----~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-- 888 (1178)
.+.+.+++.+.. .+.++++|+.+++| .....+.++.+|++|+||+.||++|++++++.++.+.
T Consensus 351 ~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~mp~~~p~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~ 430 (528)
T PRK12666 351 ADLVERQRGAAADRLAVTPELYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAG 430 (528)
T ss_pred HHHHHHhcCcchhhhhhcccccccchhhhccccccccchhHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcCCcc
Confidence 988877652211 02345567777555 6788999999999999999999999999999999875
Q ss_pred --HHHHHHHHHHHHHHHh-hhhhc
Q psy5224 889 --IWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 889 --~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+++..+++++|++++. |.|++
T Consensus 431 ~~~~~~~~~~~~s~~~~~y~lr~~ 454 (528)
T PRK12666 431 AAWWLWALVLLSGLAALIALTRAG 454 (528)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677888888888 67775
|
|
| >PRK06473 NAD(P)H-quinone oxidoreductase subunit D4; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=402.17 Aligned_cols=305 Identities=25% Similarity=0.309 Sum_probs=254.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||++++++|.++..++++ ++.+|++||++++.+||.++++|+..+|..+|+.+++.....
T Consensus 119 ~~~g~~~s~dl~~~~v~~E~~~l~~~~Li~~~~~~-~~~~Aa~ky~i~~~~gs~~lL~gi~~l~~~~g~~~~~~~~l~-- 195 (500)
T PRK06473 119 GVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLR-- 195 (500)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccHHHHH--
Confidence 44556788999999999999999999999877665 577999999999999999999999988888887776432111
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
....+.....+...++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....++....+..++.
T Consensus 196 ~~~~~~~~~~~~~~l~l~gf~~K~~~fPfH~WlP~a~~~ap~~~salLsgv~~k~g~y~l~R~~~~~~~~~~~~~~~~l~ 275 (500)
T PRK06473 196 SHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLA 275 (500)
T ss_pred hccCCchhHHHHHHHHHHHHHHhcCccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 11112222233446678899999999999999999999999999999998877677777778765544433333456788
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.++
T Consensus 276 ~l~~~s~~~g~l~al~Q~dlKrllAYSSIsh~G~il~gl~~~~~--------~~~~gal~~~~~H~l~k~~LFl~~g~i~ 347 (500)
T PRK06473 276 TWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP--------LSILAAVFQMISHGLISALLFLLVGVVY 347 (500)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999875432 4667899999999999999999999998
Q ss_pred hccCCCCchhhhhhhhc---ccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 831 NNTCNKTDELDIFIGLH---QRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~---~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
++. +++++++++|+. +++|.+...+.++.+|++|+||+.||++|++++.+.++.+ ++...++++++++++. |.
T Consensus 348 ~~~--gt~~i~~l~Gl~~~~~~~P~~~~~~~i~~lsl~GiPp~~GF~sk~~i~~~~~~~~-~~~~~~~~~~s~ls~~y~l 424 (500)
T PRK06473 348 KKT--GSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF-PVQTLLCMIGTGLTAVYFL 424 (500)
T ss_pred HHh--CCeeHHHhCCcccccccchHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHH
Confidence 876 788999999996 5799999999999999999999999999999999999864 4555667788888888 67
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 425 ~~~ 427 (500)
T PRK06473 425 LLV 427 (500)
T ss_pred HHH
Confidence 776
|
|
| >PRK12668 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=402.36 Aligned_cols=289 Identities=21% Similarity=0.336 Sum_probs=248.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+....|+|++.+|++||+++++++.++..+ +++++.|+++||+++|.+|+.++++|+.+.|..+|+++++++....
T Consensus 105 ~~lG~~~s~dl~~lfvf~El~sl~s~~LI~~~-~~~~s~~aa~kY~i~~~~gs~~lL~gi~lly~~tGsl~~~~l~~~~- 182 (581)
T PRK12668 105 SALGAVFAGDLLTLFVFWELMAFTSTFLVWAR-GTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLG- 182 (581)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHhhH-
Confidence 34455789999999999999999999999654 4456899999999999999999999999999999999998764311
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.....++++|+++|+|++|||.|+||+|+++|+++++++++++++.+.+.+.|++. . ..++.
T Consensus 183 ---------~~~~~lil~G~~~K~g~fPfH~WLPday~~a~~~~s~lLs~~~~K~gvy~l~R~~~----~-----~~~l~ 244 (581)
T PRK12668 183 ---------GTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP----G-----TELLI 244 (581)
T ss_pred ---------HHHHHHHHHHHHHHhhhcccHhHhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHc----c-----hHHHH
Confidence 11456778899999999999999999999999999999999844444455557641 1 35677
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++.+|+++|.+.+..+|+..+.+.
T Consensus 245 ~lg~~s~i~G~~~Al~q~dlKrlLAYSSIsq~G~il~~i~~~~~--------~~~~ga~~h~~~h~l~K~~LFl~aG~i~ 316 (581)
T PRK12668 245 YIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTA--------LAINGAVAHAFNHILYKGLLFMSAGAVL 316 (581)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999865432 3567889999999999999999988887
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-h-hhh
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-G-GRI 908 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~-~r~ 908 (1178)
++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|++++++..+.+.+++..+++++|+.++. | .|+
T Consensus 317 ~~~--g~~~l~~l~GL~~~~P~~~~~~~i~~lSl~GiPp~~GF~sK~~i~~~~~~~~~~~~~~~l~l~s~~~~~~~~lki 394 (581)
T PRK12668 317 YRT--GTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKL 394 (581)
T ss_pred HHc--CcccHHHhcChHhhCHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 765 788999999999999999999999999999999999999999999999998888877778888888877 6 675
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 395 ~ 395 (581)
T PRK12668 395 P 395 (581)
T ss_pred H
Confidence 4
|
|
| >MTH00068 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=395.27 Aligned_cols=305 Identities=20% Similarity=0.281 Sum_probs=253.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|+++|+++++++.++..|++++++.||+.||++++.+||.+++.|+..+|..+|++++.++....+
T Consensus 105 ~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~~~~~~~~A~~~~li~~~~~s~~lL~gi~~ly~~~gs~~~~~~~~~~~ 184 (458)
T MTH00068 105 TLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSP 184 (458)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHhhc
Confidence 34455678999999999999999999999888877778999999999999999999999999999999999977643211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls-~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
. ............++++|+++|+|++|||.|+||+|+++|++++++++ +++|.+++.+ .|+..... +....+...+
T Consensus 185 ~-~~~~~~~~~~~~~~l~gf~~K~~~~PfH~WlPda~~~aP~~~s~~lagvl~K~g~y~l-~R~~~~~~-~~~~~~~~~l 261 (458)
T MTH00068 185 M-QLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGI-LRISILLT-PLSKELSYPF 261 (458)
T ss_pred c-ccchhHHHHHHHHHHHHHHHhcchhhhHhcCcHhhccCChHHHHHHHHHHHHhhHHHH-HHHHHHhh-HHHHHHHHHH
Confidence 1 01111222334457789999999999999999999999999999997 5578777765 67754432 2222345677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.+
T Consensus 262 ~~l~~~s~~~g~l~al~Q~dlKrllAYSSIshmG~~l~~~~~~~~--------~g~~~a~~~~~~H~l~~~~lF~~~g~~ 333 (458)
T MTH00068 262 IILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTP--------WSFSGAIILMISHGLTSSALFCLANTN 333 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhChhHHHHHhhHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 789999999999999999999999999999999999999875432 466789999999999999999999888
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
+++. +++++++++|+.+++|..+..+.++.++++|+||+.||++|++++.+.++.+.++. .+..+++++++. +.|+
T Consensus 334 ~~~~--~tr~l~~l~Gl~~~~P~~~~~~~i~~ls~~GiPp~~gF~sk~~i~~~~~~~~~~~~-~~~~l~~~ls~~Y~l~~ 410 (458)
T MTH00068 334 YERT--HSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTI-LITGLGTLITAAYTLYM 410 (458)
T ss_pred HHHh--CCeeHHHhCChHhhhHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHH
Confidence 7765 77899999999999999999999999999999999999999999999999876554 456777888887 4665
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 411 ~ 411 (458)
T MTH00068 411 F 411 (458)
T ss_pred H
Confidence 4
|
|
| >PRK08667 hydrogenase membrane subunit; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=408.98 Aligned_cols=308 Identities=24% Similarity=0.417 Sum_probs=255.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
++..+..++|++.+|++||++++++|.++..+++++++.++++||++++.+|+.++++|+.++|..+|++|++++..
T Consensus 123 ~m~~vv~s~dl~~f~v~~Elmsl~sy~Li~~~~~~~~~~~Aa~kY~i~~~~gs~~lL~g~~lly~~tGs~~~~~l~~--- 199 (644)
T PRK08667 123 SMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGA--- 199 (644)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhc---
Confidence 55667889999999999999999999998766566678999999999999999999999999999999999987532
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
++........++++|+++|+|++|||.|+||+|+++|++++++++++ +|+++ +.+.|+......+. ..++..+
T Consensus 200 ----~~~~~~~~~~l~ligf~~Kagl~PfH~WLP~a~~~APs~vSallsgvm~K~gi-y~llR~~~~~~~~~-~~~~~~l 273 (644)
T PRK08667 200 ----SAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAV-YGLVRFLMDVLSPE-LWWGVLI 273 (644)
T ss_pred ----cchHHHHHHHHHHHHHHHHHhhcccHhHHHHHHhhCChHHHHHHHHHHHHHHH-HHHHHHHHHHhCcH-HHHHHHH
Confidence 11223345667888999999999999999999999999999999976 66666 45668754433222 2356678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhh---cccchhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIK---TSHNNLIIFNSCDSGLFYIITYIFAILGAFGVI 826 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~ 826 (1178)
.++|++|+++|++.|++|+|+||++|||||+|+||+++++.... ..+.+.....+..++++|+++|.+.+..+|+..
T Consensus 274 ~~lg~~S~i~G~l~Al~Q~dlKrlLAYSSI~~~G~il~glg~~~~~~~~g~~~l~~~~l~gal~h~l~Hal~K~~LFl~a 353 (644)
T PRK08667 274 LLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTA 353 (644)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999886421 111222233466789999999999999999999
Q ss_pred HHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch----H------HHHHHHH
Q psy5224 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK----I------WLLLLII 896 (1178)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~----~------~l~~l~l 896 (1178)
+.+.++. +++++++++|+.+++|.++..+.++.+|++|+||+.||++||+++++.++.+. . ....++.
T Consensus 354 G~v~~~~--gt~~i~~lgGL~~~mP~~a~~~li~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~ 431 (644)
T PRK08667 354 GSVVHAT--GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILLFSVLAIFA 431 (644)
T ss_pred HHHHHHc--CcccHHHhcChHhhCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 9988876 77899999999999999999999999999999999999999999999998642 1 2233456
Q ss_pred HHHHHHHh-hhhhc
Q psy5224 897 MCSLIGAK-GGRII 909 (1178)
Q Consensus 897 l~s~~~~~-~~r~~ 909 (1178)
+++.+++. +.|+.
T Consensus 432 l~~~l~~~~~~k~~ 445 (644)
T PRK08667 432 LTSALAAACFVKAF 445 (644)
T ss_pred HHHHHHHHHHHHHH
Confidence 77888877 67765
|
|
| >MTH00110 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=393.43 Aligned_cols=305 Identities=19% Similarity=0.244 Sum_probs=253.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+...+..++|++.+|+++|+.+++++.++..|++++++.+|+.||++++.+||.++++|+..+|..+|++|+.++....+
T Consensus 105 ~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~~~~~~~~A~~~~l~~~~~gs~~lL~gi~~ly~~~gs~~~~~~~~~~~ 184 (459)
T MTH00110 105 FLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQ 184 (459)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHhhhh
Confidence 44455778999999999999999999999888877788999999999999999999999999999999999977643211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
... +.........++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+++.+ .|+.....+ ....+...+
T Consensus 185 ~~~-~~~~~~~~~~~~l~gf~~K~~~~PfH~WlP~ah~~AP~~~s~~lagvl~K~g~ygl-~R~~~~~~~-~~~~~~~~~ 261 (459)
T MTH00110 185 PLP-NSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGM-MRITIILNP-LTEFMAYPF 261 (459)
T ss_pred ccc-cchHHHHHHHHHHHHHHHhcchhhhhhcCcHHhccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHhh-hHHHHHHHH
Confidence 110 1111112334567899999999999999999999999999999986 577777665 577543322 223344556
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.+
T Consensus 262 ~~l~~~s~~~g~l~al~Q~DlKrllAYSSIshmG~il~g~~~~~~--------~g~~ga~~~~i~H~l~~~~lF~~~g~~ 333 (459)
T MTH00110 262 LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTP--------WSFMGATALMIAHGLTSSMLFCLANSN 333 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999875432 366789999999999999999999888
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|+.++.+.++.+.++.. ++.+++++++. |.|+
T Consensus 334 ~~~~--~tr~i~~l~Gl~~~~P~~~~~~~i~~l~~~G~Pp~~gF~sk~~i~~~~~~~~~~~~~-~~~~~~~ls~~Y~l~~ 410 (459)
T MTH00110 334 YERI--HSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITII-LMGLNMLITALYSLYM 410 (459)
T ss_pred HHHh--CceeHHHhCChHhhhHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 7766 778999999999999999999999999999999999999999999999998766655 45667888888 6777
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 411 ~ 411 (459)
T MTH00110 411 L 411 (459)
T ss_pred H
Confidence 5
|
|
| >PRK12649 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=411.25 Aligned_cols=310 Identities=21% Similarity=0.300 Sum_probs=254.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..+..++|++.+|++||++++++|.++..+++++++.+++.||++++.+|+.++|+|+.++|..+|+++++++....
T Consensus 122 ~~mlglv~s~dl~~lfvfwEl~sl~sy~LI~~~~~~~~~~~aa~kyli~t~~Gs~~lL~gi~~ly~~~Gt~~~~~l~~~~ 201 (789)
T PRK12649 122 GSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDS 201 (789)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHhhh
Confidence 35566788999999999999999999999988887778899999999999999999999999999999999998875421
Q ss_pred hhc-c-CChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHH-HHHHHHHHHHHHHHHhhhhhhHhH
Q psy5224 670 KLN-N-INCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STT-PKLSLFVIIYRLLIKCLLPLVINW 745 (1178)
Q Consensus 670 ~~~-~-~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~-~k~~~~~~l~~~~~~~~~~~~~~~ 745 (1178)
... . .+.+.......++++|+++|.|+||||+|+||+|+ +|+++++++ ++. +|. +.|++.|+.. ..+ ....+
T Consensus 202 ~~~~~~~~~~~~~~~~~lil~g~~~K~a~fPfH~WLPdA~~-APtpvSalL~sa~mvK~-Gvy~l~R~~~-~~~-~~~~~ 277 (789)
T PRK12649 202 ELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLHSATMVKA-GVYLVARIHP-IFS-GTEAW 277 (789)
T ss_pred hhhcccccccHHHHHHHHHHHHHHHHhCcccCceeCccccc-CCcHHHHHHHHHHHHHH-HHHHHHHHHH-HHh-hhHHH
Confidence 110 0 11223345567888999999999999999999995 788888865 554 555 5566778742 222 22345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 746 ~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
...+..+|++|+++|++.|++|+|+||++|||||+|+||+++++....... ...+..++++|+++|.+.|..+|+.
T Consensus 278 ~~~l~~lg~~T~l~gal~Al~Q~DlKrlLAYSSIsq~G~i~~~lgl~~~~~----~~~g~~aal~~li~Hal~Ka~LFl~ 353 (789)
T PRK12649 278 FILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHE----PGLGVAAATFHLLNHATFKACLFLV 353 (789)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHccccc----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777899999999999999999999999999999999998664332110 0135678999999999999999999
Q ss_pred HHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-------HHHHHHHHHH
Q psy5224 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-------IWLLLLIIMC 898 (1178)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-------~~l~~l~ll~ 898 (1178)
.+.+.++. +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++.++.+. +.+..+.+++
T Consensus 354 aG~i~~~~--gtrdi~~lgGL~~~mP~~a~~~~i~~lslaGlPp~~GF~sK~~i~~a~~~~~~~~~~~~~~~l~~~~~l~ 431 (789)
T PRK12649 354 AGIVAHEA--ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFTIIIPAVAVLG 431 (789)
T ss_pred HHHHHHHh--CCccHHhcCChhhccHHHHHHHHHHHHHHhhChhhchHHHHHHHHHHHHHhcccccccHHHHHHHHHHHH
Confidence 99998887 78999999999999999999999999999999999999999999999998653 2344566788
Q ss_pred HHHHHh-hhhhc
Q psy5224 899 SLIGAK-GGRII 909 (1178)
Q Consensus 899 s~~~~~-~~r~~ 909 (1178)
|++++. |.|++
T Consensus 432 svlt~~Y~lr~~ 443 (789)
T PRK12649 432 GVFTFAYSIKLI 443 (789)
T ss_pred HHHHHHHHHHHH
Confidence 888887 57776
|
|
| >PRK12644 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=419.09 Aligned_cols=302 Identities=24% Similarity=0.379 Sum_probs=259.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+++.+..|+|++.+|++||++++++|.++..+++++++.++++||++++.+||.++|+|+.++|..+|+++++++...
T Consensus 118 ~mlglvlS~dl~~~fVfwEl~si~sylLI~~~~~~~~~~~Aa~kyli~t~~Gsl~lL~gi~ll~~~~Gt~~l~~l~~~-- 195 (965)
T PRK12644 118 AMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLAD-- 195 (965)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhheecCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHhh--
Confidence 455668899999999999999999999998888777789999999999999999999999999999999999877542
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
. .+........+++++|+++|.|++|||+|+||+|+ +|+++++ ++++.+++.+.|++.|+.. .++ ....|..++
T Consensus 196 -~-~~~~~~~~~~~liliG~~~Ksa~fPFH~WLPdA~~-APtpvSa~L~sa~mvKaGvyll~R~~p-~~~-~~~~~~~~l 270 (965)
T PRK12644 196 -P-PTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIYLVARLAP-GFA-DVPVWRPTV 270 (965)
T ss_pred -c-ccchHHHHHHHHHHHHHHHHhhhcchHhHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHHHHH-hhh-hhHHHHHHH
Confidence 1 12234455667889999999999999999999996 6666666 5577787788888888752 222 234566788
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.+
T Consensus 271 ~~lg~iT~l~Gal~Al~Q~DlKrlLAYSSIsqlG~i~l~lg~gt~--------~~~~~al~~ll~Hal~ka~LFl~aG~i 342 (965)
T PRK12644 271 LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTR--------DAALAGLAMLLAHALFKAALFLVVGII 342 (965)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999998865432 456788999999999999999999998
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-----HHHHHHHHHHHHHHHh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-----IWLLLLIIMCSLIGAK 904 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-----~~l~~l~ll~s~~~~~ 904 (1178)
.++. +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++.+.++.+. +++.++.+++|++++.
T Consensus 343 ~~~t--gtr~i~~lgGL~~~mP~~a~~~~ia~lSlaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~l~~~~~l~svlt~~ 420 (965)
T PRK12644 343 DHST--GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGIVLGSILTVA 420 (965)
T ss_pred HHHc--CcchHHHHcChHhhCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHH
Confidence 8876 78999999999999999999999999999999999999999999999998765 4566677788999888
Q ss_pred -hhhhc
Q psy5224 905 -GGRII 909 (1178)
Q Consensus 905 -~~r~~ 909 (1178)
|.|++
T Consensus 421 Y~lr~~ 426 (965)
T PRK12644 421 YSLRFL 426 (965)
T ss_pred HHHHHH
Confidence 67776
|
|
| >TIGR00940 2a6301s01 Tmonovalent cation:proton antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=412.38 Aligned_cols=312 Identities=22% Similarity=0.321 Sum_probs=255.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
++..+..|+|++.+|++||++++++|.++..+++++++.++++||++++.+||.++|+|+.++|..+|+++++++.....
T Consensus 118 ~mlglv~s~dl~~l~vf~El~sl~s~~LI~~~~~~~~~~~aa~ky~i~t~~gs~~lL~gi~~l~~~~Gt~~~~~i~~~~~ 197 (793)
T TIGR00940 118 AMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASAD 197 (793)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHhhh
Confidence 34556789999999999999999999999888877778999999999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HH-HHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-ST-TPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. .+.........++++|+++|+|++|||+|+||+|+ +|+++++++ ++ .+| .+.|++.|+. +.+. ....+...
T Consensus 198 ~~-~~~~~~~~~~~lil~g~~~K~a~fPfH~WLPda~~-APtpvSa~L~sa~~~K-~Gvy~l~R~~-~~~~-~~~~~~~~ 272 (793)
T TIGR00940 198 AI-RNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAME-APTPVSAYLHSATMVK-AGLYLLARFT-PVFA-GTEAWFWI 272 (793)
T ss_pred cc-ccchHHHHHHHHHHHHHHHhcCcCcCccccccccc-CCcHHHHHHHHHHHHH-HHHHHHHHHH-HHhc-chHHHHHH
Confidence 11 11223345567788999999999999999999995 788888866 54 466 5566677874 3222 22345567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhccc-----chhHHhhhhhhHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSH-----NNLIIFNSCDSGLFYIITYIFAILGAF 823 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~lf 823 (1178)
+..+|++|+++|++.|++|+|+||++|||||+|+||+++++....... ....-..+..++++|+++|.+.|..+|
T Consensus 273 l~~lg~~t~l~ga~~Al~Q~dlKrlLAYSSIsq~G~i~~~lgig~~~~~~~~~~~~iy~~~~~gal~~li~Hal~Ka~LF 352 (793)
T TIGR00940 273 VGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLF 352 (793)
T ss_pred HHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999987775432200 000011356789999999999999999
Q ss_pred HHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch----------HHHHH
Q psy5224 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK----------IWLLL 893 (1178)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~----------~~l~~ 893 (1178)
+..+.+.+++ +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++.++.+. +++..
T Consensus 353 l~aG~i~~~t--gtrdi~~lgGL~~~mP~~~~~~~i~~lSlaGlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~l~~ 430 (793)
T TIGR00940 353 MAAGIIDHET--GTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLGYLFPY 430 (793)
T ss_pred HHHHHHHHhh--hhccHHHhcChHhhhHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHccccccchhhhHHHHHHH
Confidence 9999998887 88999999999999999999999999999999999999999999999998653 34556
Q ss_pred HHHHHHHHHHh-hhhhc
Q psy5224 894 LIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 894 l~ll~s~~~~~-~~r~~ 909 (1178)
+.+++|++++. |.|++
T Consensus 431 i~~l~svlt~~Y~lr~~ 447 (793)
T TIGR00940 431 VATVASVFTFVYSLRFI 447 (793)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67888888888 67776
|
This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. |
| >TIGR01960 ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=400.79 Aligned_cols=303 Identities=22% Similarity=0.286 Sum_probs=254.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++.....|+|++.+|++||++++++|.|+..|++++++.+|++||+++|.+|+.++++|+.++|..+|++|++++....
T Consensus 131 ~~m~glv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~~~~Aa~kyfi~~~iGs~~lLlgi~~l~~~~Gt~~~~~l~~~~ 210 (606)
T TIGR01960 131 AGLGGLVLSDSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPLAGSWNYDDLAQWA 210 (606)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 45566788999999999999999999999988877778899999999999999999999999999999999998875432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.....++........++++|++.|.|++|||.|+||+|++ |+++++++++...+++.+++.|+... ... ......++
T Consensus 211 ~~~~~~~~~~~~~~lll~ig~~~Ksa~fPfH~WLPdAme~-PtpvSaLlaa~mv~aGvy~l~R~~~~-~~~-~~~~~~~l 287 (606)
T TIGR01960 211 ATANVNPTTATLLGLALIAGPTGKCAQFPLHLWLDEAMEG-PNPASILRNSVVVATGAWVLIKLQPV-LTL-SPVALTAL 287 (606)
T ss_pred hcccCCchHHHHHHHHHHHHHHHHhccccccccchhhccC-CcHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-hHHHHHHH
Confidence 2112222333444566778999999999999999999865 67788888888777777788887532 211 12234677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|.+|+++|+..|++|+|+||++||||++|+||+++++.... ..++++|+++|++.+..+|+..+.+
T Consensus 288 ~~lg~~T~l~ga~~al~Q~DlKriLAYSTIsqlG~m~l~lg~~~-----------~~~al~hl~~Ha~~Ka~LFl~aG~i 356 (606)
T TIGR01960 288 IAIGSVTAIGGSLIAIAQIDIKRALSYSVSAYMGLVFIAVGLGQ-----------GDLALLLLLTHAIAKALLFMSIGSI 356 (606)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999886422 2468999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.+++ +++++++++|+.+++|.+...+.++.+|++|+||+.||++|+.++++..+.+. +...++++++++++. |.|+
T Consensus 357 ~~~~--~~~di~~~gGl~~~~P~~~~~~~i~~lal~GlPp~~GF~sK~~Il~~~~~~~~-~~~~i~ll~s~lt~~y~~r~ 433 (606)
T TIGR01960 357 IWNT--VTQDLTELGGLWSRRPISGLSFVVGSAGLIAVPPLGSFWAWLKLADGLWATSP-WLVGVLLVVNLLTAFNLTRV 433 (606)
T ss_pred HHHc--CcccHHHhCChHhhhHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 8775 78899999999999999999999999999999999999999999999987654 445566778888888 6887
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
+
T Consensus 434 ~ 434 (606)
T TIGR01960 434 F 434 (606)
T ss_pred H
Confidence 6
|
This family represents a subfamily of NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighboring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby. |
| >MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=383.38 Aligned_cols=290 Identities=21% Similarity=0.301 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhh
Q psy5224 275 ILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354 (1178)
Q Consensus 275 ~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~ 354 (1178)
....|.+..+.|+|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++++...+..+| ++|+.++.
T Consensus 12 ~~~~~~~~~~~s~~~~~~wv~~El~~l~~~~Li~~~~~~~~~~a~~kYfl~~~~~s~~lLl~~~~~~~~~g-~~~~~~l~ 90 (346)
T MTH00112 12 SLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTG-QWDITQLT 90 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccHHHHh
Confidence 34557788889999999999999999999999988777888899999999999999999999988877777 77775553
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q psy5224 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434 (1178)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~ 434 (1178)
+ .....+++.|+++|+|++|||.|+||+|+++|+..+.++++ ..|++.++++|...+. ....++.
T Consensus 91 ~--------~~~~~ll~~~l~~K~gl~PfH~Wlp~v~~~~~~~~~~ll~~-~~K~~~~~ll~~~~~~------~~~~~l~ 155 (346)
T MTH00112 91 N--------PTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILST-WQKLAPLTLLLMTSNS------LNPTLLL 155 (346)
T ss_pred h--------HHHHHHHHHHHHHHHHhchhhccHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHH------hhHHHHH
Confidence 2 12345677899999999999999999999999888888876 5788888888754221 1234677
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q psy5224 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514 (1178)
Q Consensus 435 ~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l 514 (1178)
++|++|+++|++.|++|+|+||++|||||+|+||+++++..++.. +..|.+.|.+.+..+|+.. ++.+++++
T Consensus 156 ~l~~ls~i~g~~~al~q~~lKrlLAySSI~~~G~il~~~~~~~~~----~~~~~~~y~~~~~~lf~~~----~~~~~~~i 227 (346)
T MTH00112 156 TLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKL----TLLTFYIYILMTTPMFLTL----NTTSTKTL 227 (346)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH----HHhCcccH
Confidence 889999999999999999999999999999999999999765443 4667778888899999865 67789999
Q ss_pred hcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy5224 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIF 588 (1178)
Q Consensus 515 ~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~ 588 (1178)
++++|+.+++|..+..+.++.++++|+||+.||++||.+++++.+.+. +...+..++++++..||+|+....+.
T Consensus 228 ~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~gF~~K~~il~~~~~~~~~~l~~il~l~S~~sl~~ylri~~~~~~ 302 (346)
T MTH00112 228 KDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTI 302 (346)
T ss_pred HHHHhHHhhhHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764 45667788999999999999877654
|
|
| >PRK07363 NAD(P)H-quinone oxidoreductase subunit M; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=398.63 Aligned_cols=305 Identities=25% Similarity=0.321 Sum_probs=251.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||+++++++.++..+++ +++.++++||++++.+||.++++++..++..+|+.+++.....
T Consensus 119 ~~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~~-~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~g~~~~~~~~~~-- 195 (501)
T PRK07363 119 GIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG-EKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAIS-- 195 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHheeecCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccHHHHH--
Confidence 4555678999999999999999999999987774 4577999999999999999999998777766787665422110
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
....+.....+...++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.....+.....+...+.
T Consensus 196 ~~~~~~~~~~~~~~l~l~gf~~K~~lfPfH~WLPda~~~ap~~~s~lls~v~~k~G~y~l~R~~~~~~~~~~~~~~~~l~ 275 (501)
T PRK07363 196 TQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLA 275 (501)
T ss_pred hccCChhHHHHHHHHHHHHHHHHcCCCCccchhhhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 11122223334556788899999999999999999999999999999998866666667778754433332223356778
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.++
T Consensus 276 ~lg~~s~l~g~~~al~Q~dlKrllAYSSIshmG~il~gl~~~~~--------~~~~gal~~~~~H~l~k~~LFl~~g~i~ 347 (501)
T PRK07363 276 IIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ--------LSLLGAVAQMISHGLILALLFHLVGIVE 347 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999875432 3567899999999999999999999998
Q ss_pred hccCCCCchhhhhhhhc---ccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 831 NNTCNKTDELDIFIGLH---QRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~---~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
++. +++++++++|+. +++|.....+.++.+|++|+||+.||++|++++.+.++.+ ++...++++++++++. |.
T Consensus 348 ~~~--g~~~l~~l~Gl~~~~~~~P~~~~~~~i~~lsl~GiPp~~GF~sk~~il~~~~~~~-~~~~~~~~i~s~lt~~Y~l 424 (501)
T PRK07363 348 RKV--GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTF-PIPTLLCIVASGLTAVYFV 424 (501)
T ss_pred HHh--CcccHHHhCCcchhhhhhhHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHH
Confidence 876 788999999997 6799999999999999999999999999999999999874 4555667778888888 57
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 425 ~~~ 427 (501)
T PRK07363 425 ILL 427 (501)
T ss_pred HHH
Confidence 765
|
|
| >MTH00127 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=390.29 Aligned_cols=304 Identities=19% Similarity=0.260 Sum_probs=252.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|+++|+++++++.++..|++++++.+|+.||++++..|+.+++.|+..+|..+|++++.++......
T Consensus 107 l~~~f~s~dl~~~yv~~E~~~i~~~~Li~~~g~~~~~~~A~~y~~~~~~~gsl~lL~gi~~~y~~~gs~~~~~~~~~~~~ 186 (459)
T MTH00127 107 LILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPL 186 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHhhcc
Confidence 44557799999999999999999999998888877888999888889999999999999999999999998766432111
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
..++........++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++.+ .|+.....+ ....+...+.
T Consensus 187 -~~~~~~~~~~~~~~l~gf~~K~~~~PfH~WLP~a~~~AP~~~s~lLagvl~K~g~ygl-~R~~~~~~~-~~~~~~~~~~ 263 (459)
T MTH00127 187 -QLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM-MRMMVMLDP-LTKELSYPFI 263 (459)
T ss_pred -cccchHHHHHHHHHHHHHHHHhhhccccccCchhhccCChHHHHHHHHHHHHHHHHHH-HHHHHHHhh-hHHHHHHHHH
Confidence 0111112234456788999999999999999999999999999999865 67777665 677544322 2233445567
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.++++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.++
T Consensus 264 ~l~~~s~i~ga~~al~Q~dlKrllAYSSIshmG~il~gl~~~~~--------~g~~ga~~~~i~H~l~k~~lF~~~g~~~ 335 (459)
T MTH00127 264 ILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTP--------WGFTGALILMIAHGLTSSALFCLANTNY 335 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 79999999999999999999999999999999999999865432 4678899999999999999999998888
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++. +++++++++|+.+++|..+..+.++.++++|+||+.||++|+.++.+.++.+.++.. ++.+++++++. +.|+.
T Consensus 336 ~~~--~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~sk~~i~~~~~~~~~~~~~-~~~~~~~ls~~y~l~~~ 412 (459)
T MTH00127 336 ERT--HSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA-LTGLGTLITAGYSLYMF 412 (459)
T ss_pred Hhc--CceeHHHhCCcHhhhHHHHHHHHHHHHHHcCCCCcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 765 788999999999999999999999999999999999999999999999998765544 44567888888 46664
|
|
| >PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=375.84 Aligned_cols=282 Identities=21% Similarity=0.295 Sum_probs=233.6
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......++|++.+|++||+++++++.++... +++.||++||++++.+||.++|+|+.++|..+|++|++++.....
T Consensus 60 g~~~vv~a~Dlf~ffVf~ElmsL~syiLV~~~---~~~~eAa~KYlI~~~lGS~llLlGi~lLY~~tGsl~f~~l~~~~~ 136 (506)
T PRK06588 60 SSIICVFAADFISMIISLEFMTIFACIIIFCD---QLKIKPARQYFLTHLFSSGLILIGMTLLIQTTSNTAFTSLTESVN 136 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHhhc
Confidence 44556678999999999999999999998543 247899999999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
+. ....+++++|+++|+|++|||.|+||+|+++|++++++++++..+.+.+.+.|++.. .+.+.
T Consensus 137 ----~~---~l~~vlilvGf~iKaglfPfH~WLPdAY~~APs~vSalLsgv~~KvgiygLiRlf~~---------~~lL~ 200 (506)
T PRK06588 137 ----NF---ELPAIFILAGCLINASAIFVNGWVVNCYPIASSSGIVYLISFTTKVTLIIILKLFSG---------LEILK 200 (506)
T ss_pred ----ch---HHHHHHHHHHHHHHHHHhhccccchhhhCcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------hHHHH
Confidence 11 123356788999999999999999999999999999998877444456777787421 13577
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|+.|+|+||++|||||+|+|++++|+..++. .+...+++|++.|.+.+..+++.+...+
T Consensus 201 ~LGiiSiI~G~l~AL~Q~DlKRLLAYSSIsq~GyILlGIg~gt~--------~~~~~al~y~l~Hil~~alffl~~~~l~ 272 (506)
T PRK06588 201 FFGISMIIYGLVFSLIEKNLKRLICYLTVSQLGFILAAISINSP--------NIAYLITSFIFIHILYNGLFALYFAYIE 272 (506)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999975432 3567788999999999976665555554
Q ss_pred hccCCCCchhhhhhhhcc--cChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh
Q psy5224 831 NNTCNKTDELDIFIGLHQ--RNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK 904 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~--~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~ 904 (1178)
++ +..++++|+.+ ++|..+..+.++++|++|+||+.||++||++++++.+++......+..-++++++.
T Consensus 273 ~~-----~~l~~l~GL~~~~~~Pila~~f~I~~LSlaGIPPl~GFf~K~~l~~~~~~~~~~~~~~i~~~t~~~~~~ 343 (506)
T PRK06588 273 DE-----YDIKNYQDLQNTQINFILLIGFVISILIYTSILPISSSYIKDEIANILNENNVMLFSKIATCTVLFGLL 343 (506)
T ss_pred Cc-----cChHHHHhhhccCcChHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 32 33466778875 49999999999999999999999999999999999999988777777777777765
|
|
| >MTH00041 ND2 NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=379.07 Aligned_cols=292 Identities=21% Similarity=0.298 Sum_probs=248.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhH
Q psy5224 272 AFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351 (1178)
Q Consensus 272 l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~ 351 (1178)
++.....|+++.+.|+|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.+++.++.+.+..+| +++..
T Consensus 9 ~~~~~~~~~~~~~~s~~~~~~wv~lEl~tl~~~~li~~~~~~~~~~a~~kYfliq~~gs~~lL~~~~~~~~~~g-s~~~~ 87 (349)
T MTH00041 9 LITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSG-SWSIN 87 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Ccccc
Confidence 44456778899999999999999999999999999988888888999999999999999999999988877666 66543
Q ss_pred HhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Q psy5224 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431 (1178)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~ 431 (1178)
+. .+.....++.+|+++|+|++|||.|+||+|+++|+....++++.+|..+.+.+.|... .....
T Consensus 88 ~~--------~~~~~~~li~~~l~~Klgl~PfH~Wlp~v~~~~~~~~~~~l~~~~Ki~pl~ll~~~~~-------~~~~~ 152 (349)
T MTH00041 88 GP--------LNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISN-------LLNSN 152 (349)
T ss_pred ch--------HHHHHHHHHHHHHHHhcCCCcchhhHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHH
Confidence 21 2234456778899999999999999999999999999999987766666666655321 12346
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy5224 432 LIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511 (1178)
Q Consensus 432 ~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~ 511 (1178)
++.++|++|+++|++.|++|+|+||++|||||+|+||+++++..+. .++..|.+.|.+.+..+|+.. ++.++
T Consensus 153 ~l~~l~~ls~i~g~~~~l~q~~~KrlLAySSI~h~G~il~~l~~~~----~~~~~~~~~y~i~~~~lFl~~----~~~~~ 224 (349)
T MTH00041 153 ILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSP----NASIIMFLIYIIINTSIFLIG----NNFSL 224 (349)
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH----HHcCc
Confidence 6778999999999999999999999999999999999999986543 367889999999999999866 56789
Q ss_pred cchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhh
Q psy5224 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNII 587 (1178)
Q Consensus 512 ~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~ 587 (1178)
+++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++.++.+.+. ....+.+++++++..||+|......
T Consensus 225 ~~l~~l~gl~~~~p~~~~~~~l~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~lli~S~~sl~~ylri~~~~~ 301 (349)
T MTH00041 225 STLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTS 301 (349)
T ss_pred CCHHHHHhHHhhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764 3455667789999999999876653
|
|
| >PRK07390 NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=399.65 Aligned_cols=303 Identities=20% Similarity=0.274 Sum_probs=254.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++.....|+|++.+|++||++++++|.++..|++++++.+++.||+++|.+|+.++++|+.++|..+|++|++++....
T Consensus 131 ~~m~glv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~~~~Aa~k~fi~~~vGs~~lLlgi~~l~~~~gtl~~~~l~~~~ 210 (613)
T PRK07390 131 AAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWA 210 (613)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHh
Confidence 45667788999999999999999999999988877777899999999999999999999999999999999998876432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.....++........++++|+..|.|++|||.|+||+|++ |+++++++++..++++.|++.|+.. .... .......+
T Consensus 211 ~~~~~~~~~~~~~~~lllig~~~Ksa~fPfH~WLPdA~e~-PtpvSaLl~a~mv~aGvy~l~R~~p-l~~~-~~~~~~~l 287 (613)
T PRK07390 211 ATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEG-PNPASILRNSVVVATGAWVLIKLQP-VLAL-SPVALTVL 287 (613)
T ss_pred hcccCChhHHHHHHHHHHHHHHHHhhhcccchhhhhhccC-CcHHHHHHHHHHHHHHHHHHHHHHH-HHhh-hHHHHHHH
Confidence 2111222233344556678999999999999999999864 7778888887777777788888742 2221 22344677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.|++|+|+||++||||++|+||+++++... ...++++|+++|.+.+..+|+..+.+
T Consensus 288 ~~lg~~T~l~ga~~al~Q~DiKrlLAYSTisqlG~m~l~lg~~-----------~~~~al~hl~~Ha~~Ka~LFl~aG~v 356 (613)
T PRK07390 288 IVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ-----------QPDIALLLLLTHAIAKALLFMSVGSI 356 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999988642 13578999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.++. +++++++++|+.+++|.+...+.++.++++|+||+.||++|+.++++..+.+ ++...+.++++++++. |.|+
T Consensus 357 ~~~~--~~~di~~mgGl~~~~P~~~~~fli~~lal~GlPp~~GF~sK~~Il~~~~~~~-~~~~~~~~l~s~lt~~y~~r~ 433 (613)
T PRK07390 357 ILTT--ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVS-PWLVGVLLLVNALTAFNLTRV 433 (613)
T ss_pred HHHc--CceeHHHhcChHhhhHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHH
Confidence 8765 7889999999999999999999999999999999999999999999999876 4555567778888888 6787
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
.
T Consensus 434 ~ 434 (613)
T PRK07390 434 F 434 (613)
T ss_pred H
Confidence 6
|
|
| >MTH00144 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=373.74 Aligned_cols=302 Identities=17% Similarity=0.267 Sum_probs=249.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhH
Q psy5224 272 AFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351 (1178)
Q Consensus 272 l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~ 351 (1178)
+++....++++.+.|+|++.+|+++|+++++.+.++..++++++.|++.||+++|.+||.++++|+...+..+| ++++.
T Consensus 9 f~~~~~~~~l~~~~s~~~~~lwv~~El~~i~~~~Li~~~~~~~~~~a~~kYfii~~~gs~~ll~gi~~~~~~~g-~~~~~ 87 (328)
T MTH00144 9 FLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSF-SWFSM 87 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cHHHH
Confidence 44456678899999999999999999999999999988777788899999999999999999999998887766 54431
Q ss_pred HhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Q psy5224 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431 (1178)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~ 431 (1178)
.++++|+.+|+|++|||.|+||+|+++|++.+.++++ ..|++.+.++|..... .....
T Consensus 88 ----------------~l~~~gl~~Klg~fPfH~Wlp~~~~~~~~~~~~l~~~-~~K~~~~~~l~~~~~~-----~~~~~ 145 (328)
T MTH00144 88 ----------------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLT-WQKVAPLFLLSNFLDL-----YWLAY 145 (328)
T ss_pred ----------------HHHHHHHHHHHhccHHhccHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHh-----hhHHH
Confidence 4567899999999999999999999998777777766 5677777776643211 12356
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy5224 432 LIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511 (1178)
Q Consensus 432 ~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~ 511 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++..+++ ..++|.+.|.+.+..+|... .+.++
T Consensus 146 ~l~~~~~ls~i~g~~~al~q~~lKrlLAySSI~~~G~ill~~~~~~~----~~~~~~l~y~l~~~~lf~~~----~~~~~ 217 (328)
T MTH00144 146 LLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSW----LMWMYFLIYIVSSGFLFFSL----WSGDS 217 (328)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHhhHHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH----HHhhh
Confidence 77889999999999999999999999999999999999999976543 46789999999999999876 34578
Q ss_pred cchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy5224 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCI-GVLTSTALIFSAAYSLCLSKNIIFVL 590 (1178)
Q Consensus 512 ~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~y~l~~~~~~~~g~ 590 (1178)
+++++++|+.+++|.....+.+ .++++|+||+.||++|+.+++++.+.+.+. ..+..++++++..||+|+.+..++++
T Consensus 218 ~~~~~l~g~~~~~~~~~~~~~~-~lsl~GlPP~~GF~~K~~il~~l~~~~~~~~~~~lll~S~ls~~yylr~~~~~~~~~ 296 (328)
T MTH00144 218 GSMKDLGSLKPSYKTGLSIISL-LLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS 296 (328)
T ss_pred hhHHHHHhhhhccHHHHHHHHH-HHHHcCcccHhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999888765554444 999999999999999999999999887654 34458899999999999999998877
Q ss_pred hhhhhhhhhhHHHHH
Q psy5224 591 GQMIMISGNNLLSIY 605 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~ 605 (1178)
..-..-.++|+.+-.
T Consensus 297 ~~~~~~~~~~~~~~~ 311 (328)
T MTH00144 297 SKSKKSNSSKVLNSS 311 (328)
T ss_pred cccccchhhhHHHHH
Confidence 654444445655543
|
|
| >MTH00163 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=385.65 Aligned_cols=298 Identities=21% Similarity=0.280 Sum_probs=251.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|+++|+++++++.++..++.++++.+|+.||++++.+||.+++.|+...|..+|++++.+...
T Consensus 100 ~~~~~~s~dl~~~~v~~El~~i~~~~Li~~~g~~~~~~~A~~y~li~~~~~s~~lL~~i~~l~~~~g~~~~~~~~~---- 175 (445)
T MTH00163 100 LLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNF---- 175 (445)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHhh----
Confidence 3444678999999999999999999999878877778999999999999999999999999999899999876532
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.+........++++|+++|+|++|||.|+||+|+++|++++++++++ +|.+++. +.|+.....+ ....+..++.
T Consensus 176 ---~~~~~~~~~~l~~~~f~vK~~lfPfH~WLP~a~~~ap~~~s~iLagvl~Klg~yg-l~R~~~~~~~-~~~~~~~~l~ 250 (445)
T MTH00163 176 ---FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG-LLRVMSFFSK-LGLKFNYIWI 250 (445)
T ss_pred ---chhhHHHHHHHHHHHHHHHcccccchhcCchhhccCCchhHHHHHHHHHHHHHhH-hHHHHHHHhh-hHHHHHHHHH
Confidence 11122334567788999999999999999999999999999999975 8887776 5577543222 2223456778
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|++.+..+|...+.++
T Consensus 251 ~l~~~s~~~g~l~al~Q~dlKrllAYSSIshmG~i~~~i~~~~~--------~g~~ga~~~~i~H~l~~~~lF~~~g~i~ 322 (445)
T MTH00163 251 SISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSY--------WGLMGSLLMMIGHGLCSSGLFCLANIIY 322 (445)
T ss_pred HHHHHHHHHHHHHHHhhccHhHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 89999999999999999999999999999999999999876432 4678999999999999999999999998
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++. +++++++++|+.+++|.++..+.++.++++|+||+.||++|+.++.+..+.+. +..+++.+.+++++. +.|+.
T Consensus 323 ~~~--~tr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~~e~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~ 399 (445)
T MTH00163 323 ERL--GSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSK-LSMIFLMLLSFFSAAYSLYLY 399 (445)
T ss_pred HHh--CCEeHHHhCCCcccChHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 887 78999999999999999999999999999999999999999999999998764 444455566677666 34443
|
|
| >PRK07376 NAD(P)H-quinone oxidoreductase subunit F; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=402.73 Aligned_cols=305 Identities=21% Similarity=0.310 Sum_probs=250.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..+..++|++.+|++||++++++|.|+..|++++++.+|++||++++.+|+.++|+|+.++|..+|++|++++....
T Consensus 133 ~~ml~lv~s~nl~~lfv~wEl~~l~sy~LI~~~~~~~~~~~Aa~kyfi~~~vGs~~lLlgi~~ly~~~Gsl~~~~l~~~~ 212 (673)
T PRK07376 133 SSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRL 212 (673)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHheeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 34566678999999999999999999999988877777899999999999999999999999999999999998875432
Q ss_pred hh----ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHh
Q psy5224 670 KL----NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVIN 744 (1178)
Q Consensus 670 ~~----~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~ 744 (1178)
.. ...+.....+..+++++|++.|+|++|||.|+||+|++ |+++++++ ++.+++++.+++.|+.. .... ...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ll~~G~~~Ksa~fPfH~WLPdA~~~-PtpvSAll~a~~mv~aGvy~l~R~~~-l~~~-~~~ 289 (673)
T PRK07376 213 SELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVFLVARMYP-VFEQ-FPA 289 (673)
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHhhccchhhchhhhcC-CChHHHHHHHHHHHHHHHHHHHHHHH-HHHh-hHH
Confidence 11 11111223344567888999999999999999999965 66666655 55566777778888742 2221 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy5224 745 WQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFG 824 (1178)
Q Consensus 745 ~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~ 824 (1178)
+..++.++|++|+++|++.|++|+|+||++||||++|+||+++++... +..++++|+++|.+.+..+|+
T Consensus 290 ~~~~l~~lg~lT~l~ga~~Al~Q~diKrlLAYSSIsqlGym~l~lg~~-----------~~~~al~hl~~Ha~~Ka~LFl 358 (673)
T PRK07376 290 VMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG-----------AYSAGLFHLMTHAYFKAMLFL 358 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 556788899999999999999999999999999999999999988642 235789999999999999999
Q ss_pred HHHHHhhccCC-------CCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHH
Q psy5224 825 VIILLKNNTCN-------KTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIM 897 (1178)
Q Consensus 825 ~~~~~~~~~~~-------~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll 897 (1178)
..+.+.+...+ +++++++++|+.+++|.+...+.++.+|++|+||+.||++|+.++++.++.+. +...+.++
T Consensus 359 ~aG~vi~~~~~~~~~~~~~~~di~~mgGL~~~~P~~~~~~~i~~lslaGiPP~~GF~sK~~Il~~~~~~~~-~~~~i~ll 437 (673)
T PRK07376 359 GSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP-ALWFVGFL 437 (673)
T ss_pred cccHHHHHHccccCCCccccccHHHhcCCcccCHHHHHHHHHHHHHHhhccchhhHHHhHHHHHHHHHhCH-HHHHHHHH
Confidence 87776543321 16889999999999999999999999999999999999999999999998774 34455778
Q ss_pred HHHHHHh-hhhhc
Q psy5224 898 CSLIGAK-GGRII 909 (1178)
Q Consensus 898 ~s~~~~~-~~r~~ 909 (1178)
++++++. |.|++
T Consensus 438 ~s~lt~~Y~~r~~ 450 (673)
T PRK07376 438 TAGMTAFYMFRMY 450 (673)
T ss_pred HHHHHHHHHHHHH
Confidence 8899888 78887
|
|
| >PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=408.89 Aligned_cols=252 Identities=24% Similarity=0.316 Sum_probs=212.0
Q ss_pred ccHHHHHHHHHHHHHHHHhcccccc-ceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCC--CCcc
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELE-NLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNF--ENEN 996 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~-~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~--~~~~ 996 (1178)
++++.+.++|++|++.+++.+++.+ ...++.|+|+|+||++|+++|+.|++.|++ +|++.++|||.+..... ++++
T Consensus 4 ~~l~~a~~~a~~ag~~i~~~~~~~~~~~~~~~k~~~d~vt~aD~~aE~~i~~~L~~-~p~~~ilgEE~g~~~~~~~~~~~ 82 (569)
T PRK14076 4 DMLKIALKVAKEIEKKIKPLIGWEKAGEVVKIGADGTPTKRIDLIAENIAINSLEK-FCSGILISEEIGFKKIGKNKPEY 82 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCChhhceEEEecCCCCEeeHHHHHHHHHHHHHHHh-CCCcEEEecccCccccCCCCCCE
Confidence 5788999999999999999876432 233556788999999999999999999997 68999999998764322 2578
Q ss_pred EEEEeccCCchHHhccCCCeEEEEEEEEC-C----------------eEEEEEEEecCCCcEEEEecCCceEE----cCe
Q psy5224 997 IWIIDPLDNITNFSHNFPQYCISIALKQK-K----------------QITHSVIYDPIRNDLFTAIKGCGAYL----NEK 1055 (1178)
Q Consensus 997 ~wvIDPIDGT~nf~~g~p~~~i~ial~~~-g----------------~pv~gvV~~P~~~~~~~a~~g~ga~~----n~~ 1055 (1178)
+|+|||||||+||++|.|.||++||+.++ + +|++|+||+|.+||+|+|.+|+|+|+ |++
T Consensus 83 ~WvIDPIDGT~NFv~g~p~favsIAl~~~~~~~~~~~~~~~~~~~~~~~~~GvV~~P~~~e~y~A~~G~GA~~~~~gng~ 162 (569)
T PRK14076 83 IFVLDPIDGTYNALKDIPIYSASIAIAKIDGFDKKIKEFIGKNLTINDLEVGVVKNIATGDTYYAEKGEGAYLLKKGEKK 162 (569)
T ss_pred EEEEcCCCCchhHhcCCCceEEEEEEEecCCccccccccccccccccCcEEEEEEEcCCCCEEEEEcCCceEEecCCCCc
Confidence 99999999999999999999999999984 4 79999999999999999999999999 999
Q ss_pred ecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC--CCccchHHHH
Q psy5224 1056 RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG--LKPWNIAAGS 1133 (1178)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~--~~~wD~aA~~ 1133 (1178)
|+++++..+++++.+...... ..+ ...+..+ ..+..++|+.||+++++|+||+|++|+|++.+ .++||+|||.
T Consensus 163 ~i~~s~~~~l~~~~v~~~~~~---~~~-~~~~~~~-~~~~~~~R~~Gsaal~~~~VA~G~~D~~v~~~~~~~~wD~AAg~ 237 (569)
T PRK14076 163 KIEISNISNLKDASIGLFAYG---LSL-DTLKFIK-DRKVRRIRLFGSIALEMCYVASGALDAFINVNETTRLCDIAAGY 237 (569)
T ss_pred ccccCCCCChhhcEEEEeccC---CcH-HHHHHhh-hcCcCceEEeCcHHHhHHHhhcCCccEEEECCCCCCchhhhHHH
Confidence 999988888877777643111 111 1122221 12456899999999999999999999999988 8899999999
Q ss_pred HHHHHcCCcccccCCCCCCC-----CCCcEEEeChHHHHHHHHHHhhhc
Q psy5224 1134 LLIIESGGIISNFKGEKNYL-----YTGDIVAGNQKIFSQIISLINLNK 1177 (1178)
Q Consensus 1134 ~i~~eaGg~v~d~~G~~~~~-----~~~~iva~~~~l~~~l~~~l~~~~ 1177 (1178)
+|++||||.++|.+|+|..+ .++.++|+|+++|+++++.+++++
T Consensus 238 liv~EAGG~v~~~~G~~~~~~~~~~~~~~liaa~~~l~~~l~~~l~~~w 286 (569)
T PRK14076 238 VICKEAGGIITNKNGKPLNMKLDINEKTSVICSNEILHKKLVGIFGNKW 286 (569)
T ss_pred HHHHhCCCEEECCCCCccccccCccccceEEEECHHHHHHHHHhhhhhc
Confidence 99999999999999999654 345688999999999999998765
|
|
| >PRK08668 NADH dehydrogenase subunit M; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=400.62 Aligned_cols=305 Identities=26% Similarity=0.372 Sum_probs=254.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+++....|+|++.+|++||+++++++.++.. + ++++.|+++||+++|.+||.++++|+.++|..+|++|++++.....
T Consensus 110 ~~l~~~~s~dl~~l~v~~El~~l~s~~Li~~-~-~~~~~~aa~ky~i~~~~gs~~lL~gi~~l~~~~gt~~~~~l~~~~~ 187 (610)
T PRK08668 110 GVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-G-KKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLI 187 (610)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHhhhc
Confidence 4455678999999999999999999999964 3 4568899999999999999999999999999999999987754321
Q ss_pred hccCChhHHHHHHHHHHHHHHH-hhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hh----
Q psy5224 671 LNNINCSVLALSLLLIIVGLSF-KLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCL-----LP---- 740 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~-Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~-----~~---- 740 (1178)
. ...........++++|+++ |+|++|||.|+||+|+++|++++++++++..+.+.+++.|+..... ++
T Consensus 188 ~--~~~~~~~~~~~lll~~~~~~K~g~fPfH~WLP~a~~~apt~vSalls~~~~K~g~y~l~r~~~~~~~~~~~~~~~~~ 265 (610)
T PRK08668 188 N--DTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTY 265 (610)
T ss_pred c--cCchHHHHHHHHHHHHHHHHHhccCchhhhhhhhhCcCChHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhcccc
Confidence 1 1122334455677789999 9999999999999999999999999998755555556657432211 10
Q ss_pred -hhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHH
Q psy5224 741 -LVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAI 819 (1178)
Q Consensus 741 -~~~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 819 (1178)
....+..++..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+
T Consensus 266 ~~~~~~~~~l~~lg~~t~l~g~~~al~Q~dlKrlLAYSSIsq~G~i~~~l~~~~~--------~~~~~al~~~i~Ha~~k 337 (610)
T PRK08668 266 RGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTS--------LGFAGGLFHVFNHALFK 337 (610)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHH
Confidence 112345678889999999999999999999999999999999999998865432 35678999999999999
Q ss_pred HHHHHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHH
Q psy5224 820 LGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCS 899 (1178)
Q Consensus 820 ~~lf~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s 899 (1178)
..+|+..+.+.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++||.++++.++.+.+++..+++++|
T Consensus 338 ~~LFl~~G~i~~~~--gt~~i~~l~Gl~~~~P~~~~~~~i~~lslaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~~~~s 415 (610)
T PRK08668 338 GLFFLIFAAVIYRT--GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGS 415 (610)
T ss_pred HHHHHHHHHHHHHh--CCccHHHhcChhhhCHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 99999999888776 7889999999999999999999999999999999999999999999999887666777788889
Q ss_pred HHHHh-hhhhc
Q psy5224 900 LIGAK-GGRII 909 (1178)
Q Consensus 900 ~~~~~-~~r~~ 909 (1178)
++++. |.|+.
T Consensus 416 ~ls~~y~lr~~ 426 (610)
T PRK08668 416 IGSFLYVFRPL 426 (610)
T ss_pred HHHHHHHHHHH
Confidence 99888 67875
|
|
| >PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=411.34 Aligned_cols=305 Identities=19% Similarity=0.324 Sum_probs=253.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.+++....|+|++.+|++||++++++|.++..++ +++.++++||++++.+|+.++|+|+.++|..+|++|++++....
T Consensus 121 ~~mlglvlS~dl~~lfVfwEl~si~SylLI~~~~--~~~~~aA~kyliit~~Gsl~lL~Gi~lly~~~Gt~~~~~l~~~~ 198 (962)
T PRK12650 121 AAMLLLVLADDVVVLFVAWELVSLASFFLIARSG--SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSD 198 (962)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHhh
Confidence 4566678899999999999999999999998653 35789999999999999999999999999999999998875432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
... .+........+++.+|+++|+|++|||+|+||+|+.++|..+.++++.+++.+.|++.|+.. .+. ....|..++
T Consensus 199 ~~~-~~~~~~~~~~~Lil~g~~~Ksa~fPfH~WLPdA~~aPtpvSA~L~sa~mvKaGiy~L~R~~~-~~~-~~~~~~~~l 275 (962)
T PRK12650 199 VWA-EKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFH-DVAVWNWLL 275 (962)
T ss_pred hcc-cchHHHHHHHHHHHHHHHHHhcccchhhhHhHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-chHHHHHHH
Confidence 111 11222334456777899999999999999999998444444445566677778888888752 222 234566788
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
..+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+..+|+..+.+
T Consensus 276 ~~lg~lT~l~Gal~Al~Q~DlKrlLAYSSIsqlG~i~l~ig~g~~--------~~~~aal~~li~Hal~Ka~LFl~aG~i 347 (962)
T PRK12650 276 IIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTP--------FALTAAVVHTLAHALFKSSLFMLIGVV 347 (962)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999998875432 366789999999999999999999998
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-----HHHHHHHHHHHHHHHh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-----IWLLLLIIMCSLIGAK 904 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-----~~l~~l~ll~s~~~~~ 904 (1178)
.++. +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++..+.+. +++.++.+++|++++.
T Consensus 348 ~~~~--gtrdi~~lgGL~r~mP~t~~~~~i~~lSmaGiPP~~GF~sK~~il~a~~~~~~~~~~~~ll~~i~~l~S~ls~~ 425 (962)
T PRK12650 348 DHQA--GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVFTFA 425 (962)
T ss_pred HHhc--CcccHHHhhChhhhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 8876 88999999999999999999999999999999999999999999999998642 4455567788899888
Q ss_pred -hhhhc
Q psy5224 905 -GGRII 909 (1178)
Q Consensus 905 -~~r~~ 909 (1178)
|.|++
T Consensus 426 y~lr~~ 431 (962)
T PRK12650 426 YSARLV 431 (962)
T ss_pred HHHHHH
Confidence 67776
|
|
| >PRK06525 hydrogenase 4 subunit D; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=390.16 Aligned_cols=301 Identities=24% Similarity=0.296 Sum_probs=246.3
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|++||+++++++.++..++ ++++.|+++||++++.+||.+++.|+.++|..+|++++.++...
T Consensus 126 ~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~ll~~i~~ly~~~g~~~~~~~~~~--- 201 (479)
T PRK06525 126 MAGLVYSSTLLGLLLFFEITGLCSWALISYYQ-SPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGL--- 201 (479)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHhc---
Confidence 44456899999999999999999999997765 45789999999999999999999999999999999998766431
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS--TTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls--~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
++........++++|+++|+|++|||.|+||+|+ +|++++++++ +.+|.+++ ++.|+.....+ ....+..++
T Consensus 202 ---~~~~~~~~~~~l~~~~~~K~~~~PfH~WlPda~~-ap~~vsa~l~~~~~~K~g~~-~l~r~~~~~~~-~~~~~~~~l 275 (479)
T PRK06525 202 ---HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAME-APTPASAYLHAASMVKVGVY-IFARAIQSMGP-IPHVIGYVG 275 (479)
T ss_pred ---CchHHHHHHHHHHHHHHHHHhhccchhhcccccc-CCcHHHHHHHHHHHHHHHHH-HHHHHHHHhcc-chHHHHHHH
Confidence 1112223345577899999999999999999995 7777877775 46887765 55576543322 222345677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.+++++|+++|++.+++|+|+||++|||||+|+||+++++..... ....+..++++|+++|.+.+..+|...+.+
T Consensus 276 ~~l~~~s~i~g~l~al~Q~dlKrllAYSSI~~~G~il~~l~~~~~-----~~~~~~~~~l~~~~~h~~~k~~lF~~~g~l 350 (479)
T PRK06525 276 AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIL-----GSRLALEGSIAYIFNHAFAKSLFFLVAGAL 350 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999998864210 012356788999999999999999999988
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch--HHHH---HHHHHHHHHHHh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK--IWLL---LLIIMCSLIGAK 904 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~--~~l~---~l~ll~s~~~~~ 904 (1178)
.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|++++++.++.+. ++.. .+.++++++++.
T Consensus 351 ~~~~--~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPP~~GF~sK~~i~~~~~~~~~~~~~~l~~~~i~~~~s~ls~~ 428 (479)
T PRK06525 351 SYSC--GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASFA 428 (479)
T ss_pred HHHh--CCeeHHHhcChhhhChHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHH
Confidence 8775 78899999999999999999999999999999999999999999999999875 3322 456677888888
Q ss_pred -hhhhc
Q psy5224 905 -GGRII 909 (1178)
Q Consensus 905 -~~r~~ 909 (1178)
|.|++
T Consensus 429 y~lr~~ 434 (479)
T PRK06525 429 WFLRWF 434 (479)
T ss_pred HHHHHH
Confidence 78876
|
|
| >MTH00062 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=379.53 Aligned_cols=297 Identities=20% Similarity=0.264 Sum_probs=249.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+...+..++|++.+|+++|+++++.+.++..++.++|+.++++||+.+..+||..+++|+..+|..+|++|++++...
T Consensus 83 g~~~~f~s~dl~~fyv~~El~~ip~~~Li~~~~~~~er~~a~~~~~~Y~l~gsl~lL~gi~~ly~~~Gs~~~~~l~~~-- 160 (417)
T MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD-- 160 (417)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHhh--
Confidence 456667899999999999999999999997666666789999999999999999999999999999999999887542
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
+ . .......++++|+++|+|++|||.|+||+|+++|+++++++++ ++|.+.+. +.|+.....++ .+...+
T Consensus 161 -~---~-~~~~~~~~~l~gf~~K~pl~PfH~WLPday~eApt~vS~~Lsgvl~KlG~yg-l~R~~~~~~~~---~~~~~l 231 (417)
T MTH00062 161 -D---S-VSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLG-VYRFCGFIFSG---SFLGYL 231 (417)
T ss_pred -c---c-hHHHHHHHHHHHHHHHhhhhccccccchhhccCChHHHHHHHHHHHHHHHHH-HHHHHHHHhHH---HHHHHH
Confidence 1 1 1223345678899999999999999999999999999999998 57755554 67876544333 233566
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
...+++|+++ ++.|++|+|+||++|||||+|+|++++++.+.+. .+..++++|+++|++++.++|...+..
T Consensus 232 ~~~~~~sii~-~l~Al~Q~DlKRlLAYSSIsHmG~illgi~~~~~--------~g~~g~~~~~l~Hgl~~~~lF~~~~~l 302 (417)
T MTH00062 232 FLCCLFSVFF-LITACSELDGKRWLAFLSLSHILVPVLGLFVGDW--------SSINLSFFYCLGHGLSAGLVFLLLWCF 302 (417)
T ss_pred HHHHHHHHHH-HHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788889988 9999999999999999999999999999976432 366789999999999999999999999
Q ss_pred hhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHH--HHHHHHHHHHh-hh
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL--LIIMCSLIGAK-GG 906 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~--l~ll~s~~~~~-~~ 906 (1178)
+++. +++++++++|+.+++|..+..+.++.+|++|+||+.||++|+.++.+.++...+.... .++++++.... |.
T Consensus 303 ~~~~--gtr~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~gF~~e~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 380 (417)
T MTH00062 303 YEVS--GSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLG 380 (417)
T ss_pred HHhc--CCccHHHhcChhhhCHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776 7889999999999999999999999999999999999999999999999984333333 45666666666 54
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
.++
T Consensus 381 ~~~ 383 (417)
T MTH00062 381 HLL 383 (417)
T ss_pred HHH
Confidence 443
|
|
| >CHL00025 ndhF NADH dehydrogenase subunit 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=400.69 Aligned_cols=306 Identities=23% Similarity=0.338 Sum_probs=251.9
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHH
Q psy5224 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNV 668 (1178)
Q Consensus 589 g~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~ 668 (1178)
.-+++.++.|+|++.+|++||++++++|.|+..+++++++.||++||+++|.+|+.++|+|+.++|..+|+++++++...
T Consensus 132 ~~~ml~lv~S~nl~~l~v~wEl~~l~sylLI~~~~~~~~a~~Aa~Kyfi~~~vGs~~lLlgi~lly~~~Gt~~~~~l~~~ 211 (741)
T CHL00025 132 NTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEI 211 (741)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 34667778999999999999999999999998888877789999999999999999999999999999999999887542
Q ss_pred hhh----ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhH
Q psy5224 669 IKL----NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVI 743 (1178)
Q Consensus 669 ~~~----~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~ 743 (1178)
... ...+........+++++|++.|+|++|||.|+||+|++ |+++++++ ++.+.+++.+++.|+..... . ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~lllliG~~~Ksa~fPfH~WLPdA~eg-PtpvSAll~aa~mv~aGvy~l~R~~pl~~-~-~~ 288 (741)
T CHL00025 212 FNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFI-V-IP 288 (741)
T ss_pred HHhhhcccccchHHHHHHHHHHHHHHHHHhhhccccccchhhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HH
Confidence 211 11122233445677889999999999999999999976 66666655 55565667777778753221 1 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHH
Q psy5224 744 NWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF 823 (1178)
Q Consensus 744 ~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf 823 (1178)
.+..++.++|++|+++|++.|++|+|+||++|||||+|+||+++++... +..++++|+++|++.+..+|
T Consensus 289 ~~~~~l~~lg~lT~l~gal~Al~Q~DiKrlLAYSSIsqlG~mll~lg~~-----------~~~~alfhli~Ha~~KalLF 357 (741)
T CHL00025 289 YIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIG-----------SYRAALFHLITHAYSKALLF 357 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHH
Confidence 3346778899999999999999999999999999999999999988642 23578899999999999999
Q ss_pred HHHHHHhhcc-------CCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHH
Q psy5224 824 GVIILLKNNT-------CNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896 (1178)
Q Consensus 824 ~~~~~~~~~~-------~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~l 896 (1178)
+..+.+.+.. .++++++++++|+.+++|.+...+.++.+|++|+||+.||++|+.++++..+.+ +++..+++
T Consensus 358 l~aG~vi~~~~~~~~~~~~~~~~i~~mgGL~~~~P~~~~~~~i~~LsLaGiPP~~GF~sK~~Il~~~~~~~-~~l~~i~l 436 (741)
T CHL00025 358 LGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIAW 436 (741)
T ss_pred HhhhHHHHHhccccCCCCcccccHHHhcchHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhh-hHHHHHHH
Confidence 8887764432 125678889999999999999999999999999999999999999999998765 55666778
Q ss_pred HHHHHHHh-hhhhc
Q psy5224 897 MCSLIGAK-GGRII 909 (1178)
Q Consensus 897 l~s~~~~~-~~r~~ 909 (1178)
++++++++ |.|++
T Consensus 437 l~s~lt~~Y~lRl~ 450 (741)
T CHL00025 437 STAGLTAFYMFRIY 450 (741)
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999 78887
|
|
| >PRK12645 monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=407.03 Aligned_cols=313 Identities=22% Similarity=0.332 Sum_probs=254.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+++.+..++|++.+|++||++++++|.++..+++++++.++++||++++.+||.++++|+.++|..+|+++++++.+...
T Consensus 122 ~mlg~v~s~dl~~~~vf~El~si~s~~LI~~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~ll~~~~Gs~~~~~i~~~~~ 201 (800)
T PRK12645 122 AMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANAD 201 (800)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhh
Confidence 44556789999999999999999999999888777778999999999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.. .+........+++++|+++|+|++|||+|+||+|+ +|+++++++ ++..++.+.|++.|+. .... ....|..++
T Consensus 202 ~~-~~~~~~~~~~~lil~g~~~K~a~fPfH~WLP~a~~-aPtpvSa~L~sa~~~K~Gvy~l~R~~-~~~~-~~~~~~~~l 277 (800)
T PRK12645 202 EI-QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAME-APTPVSAYLHSATMVKAGIYLVARFT-PIFA-GSQVWFWTV 277 (800)
T ss_pred cc-ccchHHHHHHHHHHHHHHHHhccccchhhcccccC-CCcHHHHHHHHHHHHHHHHHHHHHHH-HHhh-hhHHHHHHH
Confidence 11 11223344567788999999999999999999995 677777754 6554446667777864 3222 223455678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhccc----c-hhHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSH----N-NLIIFNSCDSGLFYIITYIFAILGAFG 824 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~----~-~~~~~~~~~~~l~~~~~~~~~~~~lf~ 824 (1178)
..+|++|+++|++.+++|+|+||++|||||+|+||+++++....... . ......+..++++|+++|.+.|..+|+
T Consensus 278 ~~lg~lT~l~gal~Al~Q~dlKrlLAYSSIsq~G~i~~~lgig~~~~~~~~~~~~~y~~~~~gal~~ll~Hal~Ka~LFl 357 (800)
T PRK12645 278 TLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFM 357 (800)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999997654332100 0 001123567899999999999999999
Q ss_pred HHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch----------HHHHHH
Q psy5224 825 VIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK----------IWLLLL 894 (1178)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~----------~~l~~l 894 (1178)
..+.+.+++ +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++.++.+. ++...+
T Consensus 358 ~aG~i~~~t--gtr~i~~lgGL~~~mP~~~~~~~i~~lSlaGiPP~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (800)
T PRK12645 358 IVGIVDHET--GTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNATEANLFSLDTWGVLFPVI 435 (800)
T ss_pred HHHHHHHHh--CCeeHHHhCChhhhcHHHHHHHHHHHHHHhhchhhhHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 999999887 88999999999999999999999999999999999999999999999998652 244456
Q ss_pred HHHHHHHHHh-hhhhc
Q psy5224 895 IIMCSLIGAK-GGRII 909 (1178)
Q Consensus 895 ~ll~s~~~~~-~~r~~ 909 (1178)
.+++|++++. |.|++
T Consensus 436 ~ll~svls~~y~lr~~ 451 (800)
T PRK12645 436 AWVASVFTFVYSIIFI 451 (800)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7788888888 67776
|
|
| >PRK12648 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=408.84 Aligned_cols=304 Identities=23% Similarity=0.302 Sum_probs=254.6
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
++..+..|+|++.+|++||++++++|.++..++.++++.+++.||++++.+|+.+++.|+.++|..+|+++++++.....
T Consensus 119 ~mlglv~s~dl~~lyvfwEl~si~sylLI~~~~~~~~~~~aa~~~li~t~~Gsl~lL~gi~ll~~~~Gt~~l~~l~~~~~ 198 (948)
T PRK12648 119 AMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGD 198 (948)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHhhhh
Confidence 44556789999999999999999999999888887778999999999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-H-HHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-S-TTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s-~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. .+.........++++|+++|+|++|||+|+||+| ++|+++++++ + +.+|. +.|++.|+.. .. .....|..+
T Consensus 199 ~~-~~~~~~~~~~~lilig~~~Ksa~fPfH~WLP~A~-~APtpvSA~L~sa~mvKa-Gvy~L~R~~~-~~-~~~~~~~~~ 273 (948)
T PRK12648 199 LI-RAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAM-AAPTPVSAYLHSATMVKA-GVFLLARLWP-VL-AGTEEWFWI 273 (948)
T ss_pred cc-ccchHHHHHHHHHHHHHHHHHhhccchhhhhhhc-cCCcHHHHHHHHHHHHHH-HHHHHHHHHH-HH-hhhHHHHHH
Confidence 11 1122334566778899999999999999999999 5777777755 6 45666 5556667642 22 223345567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.|..+|+..+.
T Consensus 274 l~~lg~lT~l~Gal~Al~Q~DlKrlLAYSSIsqmG~i~l~ig~g~~--------~~~~~al~~li~Hal~Ka~LFl~aG~ 345 (948)
T PRK12648 274 VGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP--------LAAVAAIFHIINHATFKASLFMAAGI 345 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999998865432 35677899999999999999999999
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-----HHHHHHHHHHHHHHH
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-----IWLLLLIIMCSLIGA 903 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-----~~l~~l~ll~s~~~~ 903 (1178)
+.++. +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++.++.+. +++..+.+++|++++
T Consensus 346 i~~~t--gtr~i~~lgGL~~~mP~~~~~~~i~~lSlaGlPP~~GF~sK~lil~~~~~~~~~~~~~~~l~~~~~l~s~ls~ 423 (948)
T PRK12648 346 IDHET--GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSLDWLLPVAATLAGAFSV 423 (948)
T ss_pred HHHHc--CceeHHHhCChhhhhHHHHHHHHHHHHHHhhchhhchHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 98876 88999999999999999999999999999999999999999999999998764 455566777888888
Q ss_pred h-hhhhc
Q psy5224 904 K-GGRII 909 (1178)
Q Consensus 904 ~-~~r~~ 909 (1178)
. |.|++
T Consensus 424 ~y~lr~~ 430 (948)
T PRK12648 424 AYSLRFI 430 (948)
T ss_pred HHHHHHH
Confidence 7 67776
|
|
| >cd01640 IPPase IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=379.06 Aligned_cols=240 Identities=18% Similarity=0.271 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHHhccccccceEE-----EeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCC----
Q psy5224 922 IVEAIKAARKSALIINRGSLELENLRF-----EEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNF---- 992 (1178)
Q Consensus 922 l~~a~~aa~~a~~~~~~~~~~~~~~~~-----~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~---- 992 (1178)
++.+.+++++|++.+++.+++.....+ ++|+++|+||++|+++|+.|++.|++.+|++.|+|||.++....
T Consensus 2 ~~~~~~~a~~A~~~~~~~~~~~~~~~~~~~~~~kk~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~ 81 (293)
T cd01640 2 LRSLLAVAEKAGGIARDVVKKGRLLILLVEGKTKEGANDFKTLADRLSQRVIKHSLQKQFPKLKIIGEEDNEFENQEDES 81 (293)
T ss_pred HHHHHHHHHHHhhHHHHHHhccchhhhhhcccccCCCCCCccHHHHHHHHHHHHHHHHHCCCCcEEecccCcccCCcccc
Confidence 577899999999999987754322222 35678899999999999999999999999999999998653221
Q ss_pred ----------------------CCccEEEEeccCCchHHhccCC-CeEEEEEEEECCeEEEEEEEecCCCc---------
Q psy5224 993 ----------------------ENENIWIIDPLDNITNFSHNFP-QYCISIALKQKKQITHSVIYDPIRND--------- 1040 (1178)
Q Consensus 993 ----------------------~~~~~wvIDPIDGT~nf~~g~p-~~~i~ial~~~g~pv~gvV~~P~~~~--------- 1040 (1178)
.++++|+|||||||+||++|.| .||++||+.++|+|++||||+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDPIDGT~nFv~G~p~~~~vsIal~~~g~pv~GvV~~P~~~~~~~~~~~~g 161 (293)
T cd01640 82 RDVDLDEEILEESCPSPSKDLPEEDLGVWVDPLDATQEYTEGLLEYVTVLIGVAVKGKPIAGVIHQPFYEKTAGAGAWLG 161 (293)
T ss_pred ccccccHHHhhcccccccccCChHHeEEEECCccchHHHHcCCcCeeEEEEEEEeCCeEEEEEEeCCCcCccccccccCC
Confidence 1234688999999999999998 57999999999999999999999999
Q ss_pred -EEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEE
Q psy5224 1041 -LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGF 1119 (1178)
Q Consensus 1041 -~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~ 1119 (1178)
+|+|.+|.|++.|+++++ ++..+.++....... ..+ .. ........++|+.||+++++|+||+|++|+|
T Consensus 162 ~~~~a~~g~Ga~~~~~~~~----~~~~~~~~~~~~~~~---~~~-~~--~~~~~~~~~~r~~gsa~l~~~~VA~G~~D~~ 231 (293)
T cd01640 162 RTIWGLSGLGAHSSDFKER----EDAGKIIVSTSHSHS---VKE-VQ--LITAGNKDEVLRAGGAGYKVLQVLEGLADAY 231 (293)
T ss_pred eEEEEeccCccccCccccC----CCCCceEEEecCCCc---hHH-HH--HHHhcCCcceEEccchHHhhHHhhcCcccEE
Confidence 999999999999998776 234455565543321 111 11 2233345678999999999999999999999
Q ss_pred Eec--CCCccchHHHHHHHHHcCCcccccCCCCCCCC-------CCcEEEeChHHHHHHHH
Q psy5224 1120 FEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYLY-------TGDIVAGNQKIFSQIIS 1171 (1178)
Q Consensus 1120 ~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~-------~~~iva~~~~l~~~l~~ 1171 (1178)
++. +.++||+|||.+|++||||.++|.+|+|..++ .++++|++++.|+.+++
T Consensus 232 i~~~~~~~~WD~aAg~lil~eAGG~vtd~~G~~~~~~~~~~~~~~~glia~~~~~~~~~~~ 292 (293)
T cd01640 232 VHSTGGIKKWDICAPEAILRALGGDMTDLHGEPLSYSKAVKPVNKGGLLATIRSNHEAYLD 292 (293)
T ss_pred EEcCCCCccccccHHHHHHHHcCCeEEcCCCCeeecCCCCcccCCCCEEEECchhHHHHhh
Confidence 986 58899999999999999999999999986543 56799999998887764
|
Members in this group may also exhibit 3'-phosphoadenosine 5'-phosphate phosphatase activity, and they all appear to be inhibited by lithium. IPPase is one of the proposed targets of Li+ therapy in manic-depressive illness. |
| >PRK12646 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=403.77 Aligned_cols=312 Identities=22% Similarity=0.355 Sum_probs=253.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
++..+..|+|++.+|++||++++++|.++..+++++++.|+++||++++.+||.++|+|+.++|..+|++|+.++.....
T Consensus 122 ~m~glv~s~dl~~lfvf~El~sl~sy~LI~~~~~~~~~~~aa~ky~i~~~~gs~~lL~gi~~ly~~~Gt~~~~~l~~~~~ 201 (800)
T PRK12646 122 SMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQAD 201 (800)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhh
Confidence 45566889999999999999999999999887777788999999999999999999999999999999999987754211
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-H-HHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-S-TTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s-~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
... ..........++++|+++|+|++|||+|+||+|+ +|+++++++ + +.+|. +.|++.|+. +..+ ....+..+
T Consensus 202 ~~~-~~~~~~~~~~lil~g~~~K~a~fPfH~WLPda~~-APtpvSa~L~sat~~K~-Gvy~l~R~~-~l~~-~~~~~~~~ 276 (800)
T PRK12646 202 HIK-NHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLHSATMVKA-GIFLLFRFT-PLLG-LSNMYIYI 276 (800)
T ss_pred hcc-cchHHHHHHHHHHHHHHHHHhhhhchhhcCcccC-CCcHHHHHHHHHHHHHH-HHHHHHHHH-HHHh-hhHHHHHH
Confidence 111 1122334566788999999999999999999996 777777755 5 45675 555667874 2222 22345667
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccc--h----hHHhhhhhhHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHN--N----LIIFNSCDSGLFYIITYIFAILGA 822 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~--~----~~~~~~~~~~l~~~~~~~~~~~~l 822 (1178)
+.++|++|+++|++.|++|+|+||++|||||+|+||+++++........ + ..-..+..++++|+++|.+.+..+
T Consensus 277 l~~lg~lTml~gal~Al~Q~DlKrlLAYSSIsq~G~il~~lgig~~~~~~~~~~~~~~~~~~~~~al~~li~Hal~Ka~L 356 (800)
T PRK12646 277 VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCAL 356 (800)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999976654221100 0 000124567899999999999999
Q ss_pred HHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch---------HHHHH
Q psy5224 823 FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK---------IWLLL 893 (1178)
Q Consensus 823 f~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~---------~~l~~ 893 (1178)
|+..+.+.++. +++++++++|+.+++|.+...+.++.+|++|+||+.||++|++++++.++.+. +++..
T Consensus 357 Fl~aG~i~~~~--gtr~i~~l~GL~~~~P~~~~~~~i~~lSlaGlPP~~GF~sK~~i~~a~~~~~~~~~~~~~~~~~l~~ 434 (800)
T PRK12646 357 FMGVGIIDHEA--GTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVF 434 (800)
T ss_pred HHHhhHHHHhc--ccccHHHhcCHHHHCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHhccccccccchHHHHHHH
Confidence 99999998876 88999999999999999999999999999999999999999999999998653 24556
Q ss_pred HHHHHHHHHHh-hhhhc
Q psy5224 894 LIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 894 l~ll~s~~~~~-~~r~~ 909 (1178)
+.+++|++++. |.|++
T Consensus 435 i~~l~svls~~Y~lr~~ 451 (800)
T PRK12646 435 IGVIASIFTFTYALYMV 451 (800)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67888999988 68876
|
|
| >PRK12647 putative monovalent cation/H+ antiporter subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=399.68 Aligned_cols=305 Identities=22% Similarity=0.330 Sum_probs=252.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++..+..|+|++.+|++||+.++++|.++..++.++++.++++||++++.+|+.++|.|+.++|..+|++|++++....
T Consensus 106 ~~m~glvls~dl~~lfvfwEl~si~sy~LI~~~~~~~~~~~Aa~kyli~t~~Gsl~lL~gi~lly~~tGt~~~~~l~~~~ 185 (761)
T PRK12647 106 ASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASG 185 (761)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhheeeCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHhhh
Confidence 34555678999999999999999999999988887777899999999999999999999999999999999999875432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-H-HHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-S-TTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s-~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
.... +.........++++|+++|+|++|||+|+||+|+ +|+++++++ + +.+| .+.+++.|+.... .....+..
T Consensus 186 ~~~~-~~~~~~~~~~lil~g~~~K~a~fPfH~WLP~a~~-aptpvSa~L~sat~vK-~Gvy~l~R~~~~~--~~~~~~~~ 260 (761)
T PRK12647 186 DVIR-EHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLHSATMVK-AGIYLLARLNPVL--GGTPLWQT 260 (761)
T ss_pred cccc-cchHHHHHHHHHHHHHHHHHhhcccchhcchhcc-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHh--cchHHHHH
Confidence 1111 1122334567788999999999999999999996 666666644 6 4566 5566677875322 12234567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
.+..+|++|+++|++.+++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.|..+|+..+
T Consensus 261 ~l~~lg~lT~l~ga~~al~Q~dlKrlLAYSSIsqlG~i~~~lg~~~~--------~~~~~~l~~li~Hal~K~~LFl~~G 332 (761)
T PRK12647 261 ILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSE--------LAIKAAVLFLVAHSLYKGALFMVAG 332 (761)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999998865432 3567899999999999999999999
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH--HHHHHHHHHHHHHHh-
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI--WLLLLIIMCSLIGAK- 904 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~--~l~~l~ll~s~~~~~- 904 (1178)
.+.++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|++++++.++.+.+ ++..+.++++++++.
T Consensus 333 ~i~~~~--gt~~i~~l~Gl~~~~P~~~~~~~i~~lSlaGlPP~~GF~sK~~il~~~~~~~~~~~~~~~~~~l~s~lt~~y 410 (761)
T PRK12647 333 IIDHET--GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAV 410 (761)
T ss_pred HHHHHc--CcccHHHhcCchhhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 998876 788999999999999999999999999999999999999999999999997754 234456778888876
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
+.|.+
T Consensus 411 ~l~~~ 415 (761)
T PRK12647 411 AFLVG 415 (761)
T ss_pred HHHHH
Confidence 34554
|
|
| >PRK06591 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=379.02 Aligned_cols=292 Identities=22% Similarity=0.367 Sum_probs=239.6
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.+......++|++.+|+++|+++++++.++..++ ++++.|+++||+++|.+||.++|+|+.++|..+|++|++++.+..
T Consensus 126 ~~~~~~~~s~dl~~~~v~~E~~~i~~~~Li~~~~-~~~~~~aa~kY~i~~~~gs~~~L~gi~~l~~~~gt~~~~~l~~~~ 204 (432)
T PRK06591 126 TGYLGMIATNDFFNLYVFIEISALSSYVLIASGN-NPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL 204 (432)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3556678899999999999999999999997664 456899999999999999999999999999989999998775432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hhHhHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP--LVINWQK 747 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~--~~~~~~~ 747 (1178)
... .++........++++|+++|+|++|||.|+||+|+++|++.++++++++++.+.+.+.|+.....+. ....++.
T Consensus 205 ~~~-~~~~~~~~~~~l~~~g~~iK~gl~PfH~Wlp~a~~~ap~~~s~~l~~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~ 283 (432)
T PRK06591 205 QEH-TNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITN 283 (432)
T ss_pred hhc-ccchHHHHHHHHHHHHHHHHHHHcccccccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 111 1122223345567789999999999999999999999999999999998888888888987655431 1223456
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.+++|+|+||++|||||+|+||++++... ..+..++.+|+++|.+.+..+|...+
T Consensus 284 ~l~~l~~~s~l~ga~~al~Q~dlKrllAYSSIs~~G~i~l~~~~----------~~~~~~a~~~~~~h~~~k~~LF~~~~ 353 (432)
T PRK06591 284 FIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVT----------ENGIIILPSLLLADSINKIALFLIDA 353 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999987532 12456778899999999999998776
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
... +. +++|.. ..+.++.++++|+||+.||++||.++++..+.+.+++..+++++|++++. |.
T Consensus 354 ~~~-~~--------------~~~~~~-~~f~i~~lsl~GlPp~~gF~~K~~il~~~~~~~~~~~~~illl~S~l~~~yyl 417 (432)
T PRK06591 354 YNE-SY--------------KREPNK-VLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHY 417 (432)
T ss_pred HHH-Hh--------------ccCcHH-HHHHHHHHHHcCCCccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 422 11 122322 67888999999999999999999999999999888777788889999988 89
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 418 ri~ 420 (432)
T PRK06591 418 KMV 420 (432)
T ss_pred HHH
Confidence 987
|
|
| >MTH00200 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=375.29 Aligned_cols=288 Identities=22% Similarity=0.325 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhh
Q psy5224 275 ILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354 (1178)
Q Consensus 275 ~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~ 354 (1178)
....++++.+.|+|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++|+...|..+| ++|+.++.
T Consensus 12 ~~~~~~~~~~~s~~~~~~wv~lEl~~l~~~~li~~~~~~~~~~a~~kYfl~~~~~s~~lL~~~~~~~~~~g-~~~~~~~~ 90 (347)
T MTH00200 12 SLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSG-QWGISEML 90 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHh
Confidence 34568888999999999999999999999999998888888999999999999999999999988887766 77765543
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q psy5224 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434 (1178)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~ 434 (1178)
+ .....++++|+++|+|++|||.|+||+|+++|+..+.+++++ .|++.+.++|...+.. ....+.
T Consensus 91 ~--------~~~~~li~~~l~~K~g~~PfH~Wlp~v~~~~~~~~~~ll~~~-~K~~~~~ll~~~~~~~------~~~~l~ 155 (347)
T MTH00200 91 G--------PLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTW-QKLAPFALLIQLAPAL------NSNILL 155 (347)
T ss_pred h--------HHHHHHHHHHHHHHHhhCcHHhhHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHhh------hHHHHH
Confidence 2 123457788999999999999999999999999999999865 7777777777432211 125677
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q psy5224 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514 (1178)
Q Consensus 435 ~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l 514 (1178)
++|++|+++|++.+++|+|+||++|||||+|+||+++++..++.. +..+.+.|.+.+..+|.. .++.+++++
T Consensus 156 ~~~~ls~~~g~~~~l~q~~lK~llAySSi~~~G~~l~~l~~~~~~----~~~~~~~y~~~~~~lf~~----~~~~~~~~~ 227 (347)
T MTH00200 156 LLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNL----ALLYLLLYVIITLTVFLL----LNLLNSTKI 227 (347)
T ss_pred HHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH----HHHhccCcH
Confidence 899999999999999999999999999999999999999776543 456667777788888864 477889999
Q ss_pred hcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhh
Q psy5224 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNI 586 (1178)
Q Consensus 515 ~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~ 586 (1178)
++++|+.+++|..+..+.++.++++|+||+.||++||.+++++.+.+ ++..+++.++++++..||+|+....
T Consensus 228 ~~l~g~~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~l~~~~~~~~~~~~~l~s~~sl~~ylr~~~~~ 300 (347)
T MTH00200 228 NSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLT 300 (347)
T ss_pred HHHHhHHHhhHHHHHHHHHHHHHHhCCCccccHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876 4566678889999999999975544
|
|
| >MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=390.87 Aligned_cols=302 Identities=24% Similarity=0.302 Sum_probs=249.9
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..+..++|++.+|++||...+++|.|+..|++++++.+|+.||++++.+|+..+++++.+.|..+|++|++++...
T Consensus 149 ~~ml~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~s~~Aa~k~~i~~~iG~~~lLl~i~~~~~~~Gs~~~~~l~~~- 227 (628)
T MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSL- 227 (628)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHh-
Confidence 3566678899999999999999999999998877777789999999999999999999999998889999999876432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.+.+..........+++|+..|.|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+... .+ ....+..+
T Consensus 228 --~~~~~~~~~~~~~~lll~~~~Ksa~fPfH~WLPdAm~a-PtpvSallhsst~v~aGvylliR~~~l-~~-~~~~~~~~ 302 (628)
T MTH00208 228 --NNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEG-PTPVSALLHSSTMVVAGVFLLIRTSPL-IS-NSPWFLSL 302 (628)
T ss_pred --hcccchHHHHHHHHHHHHHHHHHHHcccchhHHHHHcC-CcHHHHHHHHHHHHHHHHHHHHHHHHH-HH-hhHHHHHH
Confidence 11111122233334567999999999999999999965 77777766 677899999998897422 22 12234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|+.|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 303 l~~lg~lT~l~g~l~Al~Q~DlKriLAYSTIsqlG~ml~~l~~~~-----------~~~alfhl~~Ha~~KalLFl~aG~ 371 (628)
T MTH00208 303 CLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQ-----------PNLALFHICTHAFFKAMLFLCSGS 371 (628)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHhHHHHHHHHcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999886432 236899999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++.+++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+ .++...+.++++++++. |.
T Consensus 372 ii~~~-~~~~di~~~gGL~~~~P~~~~~~~i~~lsL~GiPp~sGF~sK~~Il~~~~~~~~~~~~~~l~ll~s~lt~~Y~l 450 (628)
T MTH00208 372 IIHSL-NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSF 450 (628)
T ss_pred HHHHh-CCCccHHHhcChHhhCHHHHHHHHHHHHHHHhchhhchHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 76543 25678999999999999999999999999999999999999999999998864 44555667788999988 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 451 Ri~ 453 (628)
T MTH00208 451 RII 453 (628)
T ss_pred HHH
Confidence 887
|
|
| >MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=392.04 Aligned_cols=307 Identities=21% Similarity=0.324 Sum_probs=249.5
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..++.++|++.+|++||++++++|.++..+++++++.||++||++++.+|+.++++|+.++|..+|++|++++....
T Consensus 122 ~~m~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~s~~Aa~Kyfi~~~vGs~~lL~gi~lly~~~Gsl~~~~l~~~~ 201 (669)
T MTH00032 122 FLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGS 201 (669)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHh
Confidence 34566788999999999999999999999988877777899999999999999999999999999999999998765321
Q ss_pred hh----cc--------CCh-hHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy5224 670 KL----NN--------INC-SVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLI 735 (1178)
Q Consensus 670 ~~----~~--------~~~-~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~ 735 (1178)
.. .. .++ ........++++|++.|.|++|||.|+||+|++ |+++++++ ++.+++++.+++.|+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lllig~~~Ksa~fPfH~WLPdA~~a-PtpvSAllha~~~v~aGvyll~R~~~ 280 (669)
T MTH00032 202 VGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLMIRSFP 280 (669)
T ss_pred hcchhhccccccccccccchhHHHHHHHHHHHHHHHHHhHccchhHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 00 001 112233445778999999999999999999965 77766655 56677888888888742
Q ss_pred HhhhhhhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHH
Q psy5224 736 KCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITY 815 (1178)
Q Consensus 736 ~~~~~~~~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1178)
.... ...+..++.++|++|+++|++.|++|+|+||++||||++|+||+++++... .+..++++|+++|
T Consensus 281 -~~~~-~~~~~~~l~~lg~lT~l~gal~Al~Q~DlKriLAYSSISqlG~mll~lgl~----------~~~~~al~hll~H 348 (669)
T MTH00032 281 -LFEK-APLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIE----------GSHNVGLFHLVNH 348 (669)
T ss_pred -HHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHH
Confidence 2221 122345778899999999999999999999999999999999999987541 1346789999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc--------
Q psy5224 816 IFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-------- 887 (1178)
Q Consensus 816 ~~~~~~lf~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-------- 887 (1178)
++.+..+|+..+.+.++...+++++++++|+.+++|.+...+.++.+|++|+||+.||++|+.++++..+.+
T Consensus 349 a~~Ka~LFl~aG~ii~~~~~~~~di~~lgGL~~~~P~~~~~f~i~~LSL~GlPp~sGF~sK~~Ile~~~~~~~~~~~~~~ 428 (669)
T MTH00032 349 AFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGIPFGS 428 (669)
T ss_pred HHHHHHHHHHHHHHHHHcCCchhhHHHhcChHhHhHHHHHHHHHHHHHHHhCcccccHHHHHHHHHHHHhccccccccch
Confidence 999999999998887665335678999999999999999999999999999999999999999999998654
Q ss_pred -----------------------------hHHHHHHHHHHHHHHHhh-hhhc
Q psy5224 888 -----------------------------KIWLLLLIIMCSLIGAKG-GRII 909 (1178)
Q Consensus 888 -----------------------------~~~l~~l~ll~s~~~~~~-~r~~ 909 (1178)
..+...+.+++.++++.| .|++
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lT~~Ys~Rl~ 480 (669)
T MTH00032 429 SLLKIQGDIGIKKDDRGSIGGPEGYPSRGSAFAFWLGTVAALLTAFYSIRLV 480 (669)
T ss_pred hhhhhcccccccccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 234555667788888886 7775
|
|
| >COG1218 CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=353.51 Aligned_cols=232 Identities=23% Similarity=0.325 Sum_probs=193.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCC---cCCCCC
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNY---LTNFEN 994 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~---~~~~~~ 994 (1178)
...+++.+.+++.++++.+.+.++. ....+.+|+|++|||++|+++|++|.+.|++.+|+++|++||+.. .++...
T Consensus 5 ~~~~~~~~~~~a~~ag~~i~~~~~~-~~~~v~~K~D~SpVT~AD~~a~~iI~~~L~a~~P~ipvv~EE~~~~~~~~~~~~ 83 (276)
T COG1218 5 LDDMLEAVEKAALEAGQAILEVYKE-KGLAVWTKADNSPVTAADLAAQQIILEGLRALFPDIPVVSEEEEAIDWEERLHW 83 (276)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-cCcceeecCCCCcccHHHHHHHHHHHHHHHHhCCCCCEEEeccccCCCCCcccC
Confidence 4567889999999999999998876 678899999999999999999999999999999999999999753 244557
Q ss_pred ccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcC-------eecccCCCCCCCC
Q psy5224 995 ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNE-------KRIRVNKRNKIND 1067 (1178)
Q Consensus 995 ~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~-------~~~~~~~~~~~~~ 1067 (1178)
+++|+|||||||++|++|.++|+|+|||.++|+||+|+||+|.++.+|+|.+|.|+++.. ++.+...++..+.
T Consensus 84 ~rfWLiDPLDGTkeFi~~~~~faV~IaLie~g~Pvlgvv~~P~~~~~y~A~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T COG1218 84 DRFWLVDPLDGTKEFIKRNGDFAVNIALIENGVPVLGVVYAPETGKLYYAAAGGGAKREQSDNEGLRKKIPIRVRTPPKS 163 (276)
T ss_pred ceEEEECCCcCcHHHhcCCCceEEEEEEEECCeeEEEEEecCCcccEEEEecCCceEEeccCccccceeeeccccCCCCc
Confidence 899999999999999999999999999999999999999999999999999999999853 1222222233333
Q ss_pred cEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC-CCccchHHHHHHHHHcCCccccc
Q psy5224 1068 ALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGIISNF 1146 (1178)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~-~~~wD~aA~~~i~~eaGg~v~d~ 1146 (1178)
.......++. .+..+.+.+.. ...+..+.||+++|+|+||+|.+|+|.+.+ .+.||+|||+.+++||||.++|.
T Consensus 164 ~~~v~sr~h~----~~~~~~~l~~~-~~~~~~~iGSS~lK~clvAeG~aDiY~R~g~t~eWDtAAg~~vl~aAGG~~~d~ 238 (276)
T COG1218 164 LLVVASRSHR----SPETEELLAQL-GFIQTVSIGSSGLKFCLVAEGAADIYPRFGPTMEWDTAAGHAVLEAAGGHVTDL 238 (276)
T ss_pred eEEEEeccCC----CHHHHHHHHhc-cCCCcccccchhhhhhhhhccccCEEeecCCCccccccHHHHHHHHCCCcEecc
Confidence 3444443332 22333333322 334567789989999999999999999977 77999999999999999999999
Q ss_pred CCCCCCCCC
Q psy5224 1147 KGEKNYLYT 1155 (1178)
Q Consensus 1147 ~G~~~~~~~ 1155 (1178)
+|+|+.|++
T Consensus 239 ~G~pL~Y~~ 247 (276)
T COG1218 239 DGKPLTYNK 247 (276)
T ss_pred CCCccccCc
Confidence 999998888
|
|
| >MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=371.68 Aligned_cols=290 Identities=23% Similarity=0.339 Sum_probs=243.4
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhh
Q psy5224 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQ 355 (1178)
Q Consensus 276 ~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~ 355 (1178)
+..|.+..+.|+|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++|+...+..+| ++|+.++..
T Consensus 13 l~~~~~~~~~s~~~~~~wv~lEl~~l~~~~l~~~~~~~~~~~a~~kYfi~q~~~S~~~L~g~~~~~~~~g-~~~~~~l~~ 91 (346)
T MTH00070 13 LALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTG-EWTIMNMQT 91 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHH
Confidence 4467788899999999999999999999999988777888899999999999999999999988887766 777765532
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHH
Q psy5224 356 LSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIIT 435 (1178)
Q Consensus 356 ~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~ 435 (1178)
.....++.+|+++|+|++|||.|+||+|+++|+++++++++. .|++.+++++...+ . ....++..
T Consensus 92 --------~~~~~l~~~~l~~K~g~~PfH~Wlp~~~~~~~~~~~~ll~~~-~K~~~~~ll~~~~~---~---~~~~~l~~ 156 (346)
T MTH00070 92 --------PLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTW-QKLAPMALLIQISH---L---LNSNLLII 156 (346)
T ss_pred --------HHHHHHHHHHHHHHHccCcccccHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHH---h---hhHHHHHH
Confidence 122356788999999999999999999999999999999865 67666665432111 1 11346778
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q psy5224 436 LSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515 (1178)
Q Consensus 436 ~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~ 515 (1178)
+|++|+++|++.|++|+|+||++|||||+|+||+++++..++.. ...|.+.|.+.+..+|...+ +.++++++
T Consensus 157 l~~ls~i~g~~~al~q~~lK~llaySSI~~~G~~l~~~~~~~~~----~~~~~~~y~~~~~~lf~~~~----~~~~~~i~ 228 (346)
T MTH00070 157 MGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHL----TLLNLLIYLIMTSSMFLMLM----NLNSTNIN 228 (346)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHHHH----HhcccCHH
Confidence 89999999999999999999999999999999999998765433 45666677788888988763 56788999
Q ss_pred cccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy5224 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFV 589 (1178)
Q Consensus 516 ~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g 589 (1178)
+++|+.+++|..+..+.++.++++|+||+.||++|+.++.++.+.+. ....++.++++++..|++|+.+..++.
T Consensus 229 ~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~l~l~s~~s~~~ylr~~~~~~~~ 303 (346)
T MTH00070 229 KLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLT 303 (346)
T ss_pred HHHhHHHhhHHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999988663 455667789999999999998776553
|
|
| >PRK08042 formate hydrogenlyase subunit 3; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=388.12 Aligned_cols=304 Identities=21% Similarity=0.339 Sum_probs=244.9
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
++.....++|++.+|++||++++++|.++..+ +++.||++++.+|+.++++|+.++|..+|+++++++.....
T Consensus 102 ~m~gvv~s~dl~~f~v~wElmsL~sy~Li~~~-------~a~~~y~~~~~~gs~~ll~g~~lly~~~Gs~~f~~l~~~~~ 174 (593)
T PRK08042 102 AAVCAVIASNLGMFVVMAEIMALCAVFLTGNS-------KEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQ 174 (593)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHhhhc
Confidence 45666789999999999999999999998532 24679999999999999999999999999999988754321
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
+.+... ....+.++||++|+|++|||.|+||+|+++|++++++++++ +|++++.++ |+.. ........++.++
T Consensus 175 --~~~~~~--~~~~l~liGf~~K~gl~PfH~WLP~a~~~AP~~vsalls~v~~Kig~y~li-r~~~-~~~~~~~~~~~~l 248 (593)
T PRK08042 175 --QLPLGS--DIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-TLSL-LGGNAPLWWGVAL 248 (593)
T ss_pred --ccccch--HHHHHHHHHHHHHHHHhHHHhHHHHHhccCChHHHHHHHHHHHHHHHHHHH-HHHH-hhccchHHHHHHH
Confidence 111111 22345678999999999999999999999999999999985 787777655 5532 1112223455678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcc---cchhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTS---HNNLIIFNSCDSGLFYIITYIFAILGAFGVI 826 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~ 826 (1178)
.++|++|+++|++.+++|+|+||++|||||+|+||+++++...... +.+.....+..++++|+++|.+.+..+|+..
T Consensus 249 ~~lg~iS~i~G~l~Al~Q~dlKRLLAYSSIs~~G~il~glg~~~~~~~~~~~~l~~l~~~gal~hll~Hal~K~lLFl~a 328 (593)
T PRK08042 249 LVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGA 328 (593)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHccchhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999988653210 1111223456678999999999999999999
Q ss_pred HHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH----------HHHHHHH
Q psy5224 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI----------WLLLLII 896 (1178)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~----------~l~~l~l 896 (1178)
+.+.+++ +++++++++|+.+++|.++..+.++.+|++|+||+.||++||+++++.++.+.. +...++.
T Consensus 329 G~v~~~~--gt~~l~~lgGL~~~~P~~a~~~li~~lslaGlPP~~GF~sK~~I~~~~~~~~~~~~~~~~~~~~l~~~~l~ 406 (593)
T PRK08042 329 GSVWFRT--GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLA 406 (593)
T ss_pred hHHHHHc--CcccHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHH
Confidence 9888776 788999999999999999999999999999999999999999999999986431 2333456
Q ss_pred HHHHHHHh-hhhhc
Q psy5224 897 MCSLIGAK-GGRII 909 (1178)
Q Consensus 897 l~s~~~~~-~~r~~ 909 (1178)
+++.+++. |.|+.
T Consensus 407 l~s~la~~~~~k~~ 420 (593)
T PRK08042 407 ITGALAVMCMAKVY 420 (593)
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777 67776
|
|
| >MTH00105 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=370.00 Aligned_cols=291 Identities=22% Similarity=0.316 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhh
Q psy5224 275 ILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354 (1178)
Q Consensus 275 ~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~ 354 (1178)
....|.++.+.|+|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++|+...+..+| ++|+.+..
T Consensus 12 ~~~~~~~~~~~s~n~~~~wv~~El~~l~~~~li~~~~~~~~~~a~~kYfi~q~~~S~~lL~~i~~~~~~~g-~~~~~~~~ 90 (347)
T MTH00105 12 TLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSG-QWTITKLT 90 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CccHHhhh
Confidence 34556777889999999999999999999999877777888899999999999999999999988777666 66654432
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q psy5224 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434 (1178)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~ 434 (1178)
+ .....++++|+++|+|++|||.|+||+|+++|+....++++++ |++.+.+.+... +. .....+.
T Consensus 91 ~--------~~~~~l~~~~l~~K~g~~PfH~Wlp~v~~~~~~~~~~~l~t~~-Ki~p~~i~~~~~---~~---~~~~~l~ 155 (347)
T MTH00105 91 N--------PTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQ-KLAPLSILYQIS---PS---INPNLLL 155 (347)
T ss_pred h--------HHHHHHHHHHHHHHhCCChhhcCHHHHHcCCcHHHHHHHHHHH-HHHHHHHHHHHH---hh---hhHHHHH
Confidence 1 2334567789999999999999999999999998888887754 566555433111 11 1234677
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q psy5224 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514 (1178)
Q Consensus 435 ~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l 514 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++..++ ..+..|.+.|.+.+..+|... ++.+++++
T Consensus 156 ~l~~~s~~~g~l~~l~q~~lK~llAySSI~~~G~~l~~~~~~~----~~~~~~~~~y~~~~~~lf~~~----~~~~~~~~ 227 (347)
T MTH00105 156 TLAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNP----TLTLLNLLIYIIMTLTMFMLL----MLNSSTTT 227 (347)
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHH----HHHhhccH
Confidence 8899999999999999999999999999999999999886543 346778889999999999876 45678899
Q ss_pred hcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy5224 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFV 589 (1178)
Q Consensus 515 ~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g 589 (1178)
++++|+.+++|..+..+.++.++++|+||+.||++||.++.+..+.+. ....+..++++++..||+|.....+++
T Consensus 228 ~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~l~~~l~l~S~isl~~Ylr~~~~~~~~ 303 (347)
T MTH00105 228 LSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLT 303 (347)
T ss_pred HHHHhHhhccHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988774 455666778999999999998776543
|
|
| >MTH00020 ND5 NADH dehydrogenase subunit 5; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=390.08 Aligned_cols=303 Identities=22% Similarity=0.310 Sum_probs=248.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..++.++|++.+|++||++++++|.++..|++++++.+|+.||++++.+|+.++++|+.++|..+|++|++++....
T Consensus 122 ~~m~~lv~s~nl~~~~v~~E~~~l~sy~LI~~~~~~~~~~~aa~ky~i~~~igs~~lL~gi~~l~~~~Gt~~~~~l~~~~ 201 (610)
T MTH00020 122 FLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMV 201 (610)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHh
Confidence 34566788999999999999999999999988877778999999999999999999999999999999999998765321
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. ..+.+.......++++|+++|.|++|||.|+||+|++ |+++++ ++++.+++++.+++.|+.. ..+. ...+...
T Consensus 202 ~--~~~~~~~~~~~~l~l~g~~~K~a~~PfH~WLP~a~~a-PtpvSall~a~~~v~aGvy~l~R~~~-~~~~-~~~~~~~ 276 (610)
T MTH00020 202 V--SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLLIRSSP-LFEQ-APLALII 276 (610)
T ss_pred c--ccCccHHHHHHHHHHHHHHHHHhhccChhhHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH-HHHh-hHHHHHH
Confidence 1 1112233344556788999999999999999999964 666666 5567788888888888642 2221 1223347
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++||||++|+||+++++... ...++++|+++|++.+..+|+..+.
T Consensus 277 l~~lg~~t~l~g~~~al~q~DlKrllAySSisqlG~m~~~~~~~-----------~~~~a~~hl~~Ha~~ka~LFl~~G~ 345 (610)
T MTH00020 277 VTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS-----------HYSISLFHLMNHAFFKALLFLSAGS 345 (610)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 77899999999999999999999999999999999999987532 2357889999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHH-HHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW-LLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~-l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+... ...+.++++++++. |.
T Consensus 346 vi~~~-~~~~~i~~lggl~~~~P~~~~~~~i~~lsl~GiPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~l 424 (610)
T MTH00020 346 VIHAL-SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSI 424 (610)
T ss_pred HHHHh-CCCccHHHHcChhhhcHHHHHHHHHHHHHHhCCccccchHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 65543 25678999999999999999999999999999999999999999999999876432 33455678888888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 425 r~~ 427 (610)
T MTH00020 425 RLI 427 (610)
T ss_pred HHH
Confidence 876
|
|
| >MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=368.09 Aligned_cols=286 Identities=18% Similarity=0.251 Sum_probs=238.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhH
Q psy5224 272 AFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351 (1178)
Q Consensus 272 l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~ 351 (1178)
.+.....++.+.+.|+|++++|+++|+++++++.++..++++++.+++.||+++|.+||.++++++...+..+| +.
T Consensus 10 ~~~~l~~~~~~~~~s~~l~~~~v~~El~~l~~~~Li~~~~~~~~~~~~~kY~l~~~~gs~~ll~~i~~~~~~~g-~~--- 85 (335)
T MTH00160 10 FLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM-LF--- 85 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Ch---
Confidence 34445668888999999999999999999999999998888888999999999999999999999998877666 32
Q ss_pred HhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Q psy5224 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431 (1178)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~ 431 (1178)
+.....++++|+.+|+|++|||.|+||+|+++|++.+.++++++|..+.+.+.|+. ...
T Consensus 86 -----------~~~~~~l~~~gl~~K~g~fPfH~Wlp~~~~~~~~~~~~~ls~~~Kv~~~~~~~~~~----------~~~ 144 (335)
T MTH00160 86 -----------NNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI----------NNN 144 (335)
T ss_pred -----------hhHHHHHHHHHHHHHhCCChHhccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH----------HHH
Confidence 11234467789999999999999999999999999999999875554544444432 135
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy5224 432 LIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511 (1178)
Q Consensus 432 ~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~ 511 (1178)
++..++++|+++|++.|++|+|+||++|||||+|+||+++++..++.. ...|.+.|.+.....+. ..++.|+
T Consensus 145 ~l~~l~~ls~i~g~~~al~q~dlKrllAySSI~~~G~il~~l~~~~~~----~~~~~~~y~~~~~~~~~----~~~~~~~ 216 (335)
T MTH00160 145 FIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENL----WLIYFLIYSIISLSIIL----LFNKFNI 216 (335)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH----HHHHhHH
Confidence 677899999999999999999999999999999999999999776543 33455555554444332 3467789
Q ss_pred cchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy5224 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFVL 590 (1178)
Q Consensus 512 ~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g~ 590 (1178)
+++++++|+.+++|..+..+.++.++++|+||+.||++|+.++.++.+.+ ++...+..++++++..|++|..++.+.++
T Consensus 217 ~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPp~~gF~~K~~il~~~~~~~~~~l~~~l~i~S~~s~~~ylri~~~~~~~~ 296 (335)
T MTH00160 217 FFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN 296 (335)
T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998776 34556678899999999999998887654
|
|
| >PRK06590 NADH:ubiquinone oxidoreductase subunit L; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=388.78 Aligned_cols=305 Identities=22% Similarity=0.350 Sum_probs=250.9
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++...+.++|++.+|++||++++++|.++..+++++++.+|++||+++|.+|+.++++|+.++|..+|++|++++....
T Consensus 126 ~~m~~lv~s~nl~~l~v~~E~~~l~sy~LI~~~~~~~~~~~aa~ky~i~~~vGs~~lL~gi~~l~~~~gs~~~~~l~~~~ 205 (624)
T PRK06590 126 FSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAA 205 (624)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHhhh
Confidence 45566788999999999999999999999988877777899999999999999999999999999999999998765421
Q ss_pred h-hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 670 K-LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 670 ~-~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
. ..+.+.........++++|+++|.|++|||.|+||+|+ +|+++++++ ++.+.+++.|++.|+.. ... ....+..
T Consensus 206 ~~~~~~~~~~~~~~~~ll~~g~~~K~a~~PfH~WLP~a~~-aPtpvSall~s~~~v~aGvy~l~R~~~-l~~-~~~~~~~ 282 (624)
T PRK06590 206 PQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAME-GPTPVSALIHAATMVTAGVYLVARMSP-LFE-LSPEALL 282 (624)
T ss_pred hhccccCchHHHHHHHHHHHHHHHHHhhccchhhcccccc-CCcHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhHHHHH
Confidence 1 11122223334445678899999999999999999996 566666644 55555566667778742 222 1223456
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++||||++|+||+++++.. .+..++++|+++|++.+..+|+..+
T Consensus 283 ~l~~lg~~t~l~g~~~al~q~dlKrilAySSisqlG~m~~~l~~-----------~~~~~a~~hl~~Ha~~Ka~LFl~aG 351 (624)
T PRK06590 283 FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGV-----------GAYAAAIFHLMTHAFFKALLFLGAG 351 (624)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999998832 2446789999999999999999988
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
.+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+.++...++++++++++. |.
T Consensus 352 ~ii~~~-~~~~~i~~~ggl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~sK~~il~~~~~~~~~~~~~~~~~~s~lt~~y~~ 430 (624)
T PRK06590 352 SVIHAM-HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLTAFYSF 430 (624)
T ss_pred HHHHHh-cCcccHHHhcCchhhcHHHHHHHHHHHHHHhhCcchhhHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 766554 2478899999999999999999999999999999999999999999999997766666777888899888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 431 r~~ 433 (624)
T PRK06590 431 RLI 433 (624)
T ss_pred HHH
Confidence 876
|
|
| >MTH00004 ND5 NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=386.02 Aligned_cols=298 Identities=23% Similarity=0.316 Sum_probs=245.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++..++.|+|++.+|++||..++++|.++..+++++++.+|++||+++|.+|+.++++|+.++|..+|+++++++...
T Consensus 126 ~sm~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~s~~Aa~ky~i~~~igs~~lL~gi~~l~~~~gt~~~~~l~~~- 204 (602)
T MTH00004 126 IAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSP- 204 (602)
T ss_pred HHHHHHHHHchHHHHHHHHHHHHHHheeeeeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHh-
Confidence 4566678899999999999999999999998777777789999999999999999999999999999999999776431
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. . .......++++...|.|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+.... .. ...+..+
T Consensus 205 --~~--~--~~~~~~~lll~~~~Ksa~fPfH~WLP~A~~a-PtpvSallhs~~~v~aGvylliR~~~~~-~~-~~~~~~~ 275 (602)
T MTH00004 205 --TQ--T--PTLPLLGLILAATGKSAQFGLHPWLPAAMEG-PTPVSALLHSSTMVVAGIFLLIRTHPLL-QN-NQTALTI 275 (602)
T ss_pred --cc--h--HHHHHHHHHHHHHHhcCCCCCCCCCCCeecC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-hHHHHHH
Confidence 10 1 1112222445566699999999999999865 66666666 7889999999998974322 11 1234457
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|+++|++.+..+|+..+.
T Consensus 276 l~~lg~lT~l~g~l~Al~q~diKrlLAySSisqlG~m~~~i~~~~-----------~~~al~hll~Ha~~KalLFl~aG~ 344 (602)
T MTH00004 276 CLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ-----------PQLAFLHISTHAFFKAMLFLCSGS 344 (602)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 778999999999999999999999999999999999999886432 246899999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+ .++...+.++++++++. |.
T Consensus 345 ii~~~-~~~~di~~~ggl~~~~P~~~~~~~i~~lsl~GiPp~~GF~sK~~Il~~~~~~~~~~~~~~l~ll~s~lt~~Y~l 423 (602)
T MTH00004 345 IIHNL-NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSL 423 (602)
T ss_pred HHHHc-CCCeeHHHhCCchhhcHHHHHHHHHHHHHHhCCCccCCchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 65543 35678999999999999999999999999999999999999999999999875 34555566778888888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 424 r~~ 426 (602)
T MTH00004 424 RMI 426 (602)
T ss_pred HHH
Confidence 886
|
|
| >PRK06459 hydrogenase 4 subunit B; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=377.37 Aligned_cols=276 Identities=25% Similarity=0.360 Sum_probs=229.6
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..+..++|++.+|++||+++++++.++..++ ++.++++||++.+.+|+.+++.|+.++|..+|+++++++...
T Consensus 83 ~gm~~v~~s~dl~~f~v~wEl~~l~sy~LI~~~~---~~~~Aa~~yli~~~~gs~~lL~gi~~ly~~tGs~~f~~l~~~- 158 (585)
T PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTK---KNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSP- 158 (585)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHhH-
Confidence 3556678899999999999999999999997653 346899999999999999999999999999999998765320
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCcccc--ccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHM--WVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~--Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
...+++++|+++|+|++|||. |+||+|+++|+++++++++++|+.+.+.+.|+.....+.....++.
T Consensus 159 -----------~~~~l~liGf~~K~g~fPfH~~~WLP~a~~~APs~vSallSgv~~k~gvy~liR~~~~~~~~~~~~~~~ 227 (585)
T PRK06459 159 -----------VPLILASFGFIIKMGMMPFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGL 227 (585)
T ss_pred -----------HHHHHHHHHHHHHHhhccccccCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 123567789999999999999 9999999999999999999999999999989864332211225667
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccc--hhHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHN--NLIIFNSCDSGLFYIITYIFAILGAFGV 825 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~lf~~ 825 (1178)
++..+|++|+++|++.|++|+|+||++|||||+|+||+++++........ ......+..++++|+++|.+.+..+|+.
T Consensus 228 ~l~~lg~lS~i~G~l~Al~Q~dlKrlLAYSSIs~~G~illglg~~~~~~~~~~~l~~~~l~gal~~~l~Hal~K~~LFl~ 307 (585)
T PRK06459 228 TILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLS 307 (585)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999997754321111 1112235568999999999999999999
Q ss_pred HHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch
Q psy5224 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888 (1178)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~ 888 (1178)
.+.+.+++ ++++.+ +++|.....+.++.+|++|+||+.||++||+++++.++.+.
T Consensus 308 aG~i~~~~--~t~~~~------~~~p~~~~~~~i~~lsl~GlPP~~GF~sk~li~~~~~~~~~ 362 (585)
T PRK06459 308 SGLQEKQS--ITYSKK------IRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAY 362 (585)
T ss_pred HHHHHHHh--Ccchhh------hhCcHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhCc
Confidence 99998876 444433 24588889999999999999999999999999999999864
|
|
| >MTH00210 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=386.45 Aligned_cols=304 Identities=22% Similarity=0.320 Sum_probs=248.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..++.++|++.+|++||.+++++|.++..|++++++.++++||+++|.+|+.++++|+.++|..+|++|++++....
T Consensus 122 ~~m~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~~~~aa~k~~i~~~vGs~~lLlgi~~l~~~~gt~~~~~~~~~~ 201 (616)
T MTH00210 122 FLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLL 201 (616)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHh
Confidence 35667788999999999999999999999988877777899999999999999999999999999999999998765321
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. ..++........++++|++.|.|++|||.|+||+|++ |+++++ ++++.+++++.+++.|+.. ..+. ......+
T Consensus 202 ~~-~~~~~~~~~~~~ll~~~~~~Ksa~fPfH~WLP~a~~a-PtpvSall~s~~~v~aGvyll~R~~~-l~~~-~~~~~~~ 277 (616)
T MTH00210 202 VT-NINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLIIRSGP-LFEG-SPLALTI 277 (616)
T ss_pred hc-cccccHHHHHHHHHHHHHHHHHhhccchhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-cHHHHHH
Confidence 11 1112223344556778999999999999999999964 666555 5677788888888888742 2221 1123356
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++||||++|+||+++++... ...++++|+++|++.+..+|+..+.
T Consensus 278 l~~lg~lT~l~g~~~al~q~DlKrilAySSisqlG~m~~~l~~~-----------~~~~al~hli~Ha~~kalLFl~aG~ 346 (616)
T MTH00210 278 VTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS-----------NYSTSLFHLMNHAFFKALLFLSAGS 346 (616)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999987542 2357889999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHH-HHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWL-LLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l-~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+.... ..+.++++++++. |.
T Consensus 347 ~i~~~-~~~~~i~~lgGl~~~~P~~~~~~~i~~lsl~GlPp~sGF~sK~~Il~~~~~~~~~~~~~~l~~~~s~lt~~Y~~ 425 (616)
T MTH00210 347 VIHAV-SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSI 425 (616)
T ss_pred HHHHh-CCCccHHHhcCcccccHHHHHHHHHHHHHHhCCCccccHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 65543 256788999999999999999999999999999999999999999999987754333 3356778888888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 426 r~~ 428 (616)
T MTH00210 426 RLI 428 (616)
T ss_pred HHH
Confidence 886
|
|
| >MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=367.29 Aligned_cols=289 Identities=20% Similarity=0.325 Sum_probs=240.9
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhh
Q psy5224 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQ 355 (1178)
Q Consensus 276 ~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~ 355 (1178)
+..+.+..+.++|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++++...+..+| ++++.++..
T Consensus 13 ~~~~~~~~~~s~~~~~~wv~~El~~l~~~~Li~~~~~~~~~~a~~kYfi~q~~~s~~~L~~~~~~~~~~g-~~~~~~~~~ 91 (347)
T MTH00135 13 LGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTG-QWDIQQMSH 91 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHhh
Confidence 3457788899999999999999999999999988878888899999999999999999999988877766 776654422
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHH
Q psy5224 356 LSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIIT 435 (1178)
Q Consensus 356 ~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~ 435 (1178)
.....++++|+.+|+|++|||.|+||+|+++|+..+.++++. .|++.+.++... .+. ...++..
T Consensus 92 --------~~~~~l~~~~l~~KlG~~PfH~Wlp~~~~~~~~~~~~ll~t~-~K~~p~~ll~~~---~~~----~~~~l~~ 155 (347)
T MTH00135 92 --------PLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTW-QKLAPFALILQI---APT----NPTLLIT 155 (347)
T ss_pred --------HHHHHHHHHHHHHHHhhccccccHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHH---HHh----hHHHHHH
Confidence 123346678999999999999999999999999999998874 566666654311 111 2456778
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q psy5224 436 LSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515 (1178)
Q Consensus 436 ~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~ 515 (1178)
+|++|+++|++.|++|+|+||++|||||+|+||+++++..++.. +..+.+.|.+.+..+|+.. ++.++++++
T Consensus 156 ~~~~s~~~g~~~~l~q~~lK~llAySSI~~~g~~l~~~~~~~~~----~~~~~~~Y~l~~~~lf~~~----~~~~~~~i~ 227 (347)
T MTH00135 156 LGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSL----TLLALLTYIIMTSSAFLTF----KLNSSTKIN 227 (347)
T ss_pred HHHHHHHHHHHHhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH----HHhhhhhHH
Confidence 89999999999999999999999999999999999999776554 4445556666777888753 677899999
Q ss_pred cccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy5224 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIFV 589 (1178)
Q Consensus 516 ~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~y~l~~~~~~~~g 589 (1178)
+++|+.++.|..+..+.+..++++|+||+.||++||.+++++.+.+ ++...+..++++++..||+|+..+.++.
T Consensus 228 ~~~g~~~~~p~~~~~~~~~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~l~~~s~~sl~~Yl~~~~~~~~~ 302 (347)
T MTH00135 228 TLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLT 302 (347)
T ss_pred HHHhHHhhCHHHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998876 3455667789999999999987766543
|
|
| >MTH00108 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=383.89 Aligned_cols=299 Identities=22% Similarity=0.337 Sum_probs=244.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++.....|+|++.+|++||..++++|.++..+++++++.+|++||+++|.+|+.++++|+.++|..+|+++++++...
T Consensus 126 ~~m~~lv~s~nl~~l~v~wE~~~l~sy~Li~~~~~~~~~~~aa~ky~l~~~igs~~ll~~i~~l~~~~gs~~~~~l~~~- 204 (602)
T MTH00108 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFML- 204 (602)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHHHh-
Confidence 4566678899999999999999999999998777777789999999999999999999999999989999998766421
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.. .. .......+++++..|.|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+.... . ....+..+
T Consensus 205 --~~-~~--~~~~~~~lll~~~~Ksa~fPfH~WLP~a~~a-PtpvSallhs~~~v~agvylliR~~~~~-~-~~~~~~~~ 276 (602)
T MTH00108 205 --NP-NN--SNLPLMGLLLAATGKSAQFGLHPWLPSAMEG-PTPVSALLHSSTMVVAGVFLLIRFHPLM-E-NNKTIQTL 276 (602)
T ss_pred --cc-cc--hHHHHHHHHHHHHHHhhcccCCCCchhHHcC-CcHHHHHHHHHHHHHHHHHHHHHHHHHh-c-ccHHHHHH
Confidence 11 11 1112222445667799999999999999965 66666666 7889999999988874221 1 12234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 277 l~~lg~lT~l~g~l~Al~Q~dlKrilAySSisqlG~ml~~l~~g~-----------~~~a~~hl~~Ha~~ka~LFl~~G~ 345 (602)
T MTH00108 277 TLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQ-----------PHLAFLHICTHAFFKAMLFMCSGS 345 (602)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999886432 136789999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.+++++.+.+ .++...+.++++++++. |.
T Consensus 346 ii~~~-~~~~di~~lgGl~~~~P~~~~~~~i~~lsL~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~ll~s~lt~~Y~l 424 (602)
T MTH00108 346 IIHNL-NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYST 424 (602)
T ss_pred HHHHc-CCcccHHHhcChHhhhHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 65543 35678999999999999999999999999999999999999999999998754 34455556778888888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 425 rl~ 427 (602)
T MTH00108 425 RII 427 (602)
T ss_pred HHH
Confidence 886
|
|
| >TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase, chain L | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=387.34 Aligned_cols=303 Identities=22% Similarity=0.363 Sum_probs=250.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++...+.++|++.+|++||++++++|.++..+++++++.++++||+++|.+|+.++++|+.++|..+|++|++++....
T Consensus 125 ~~m~~lv~s~nl~~l~v~~E~~~l~sy~Li~~~~~~~~~~~a~~ky~i~~~vgs~~lL~gi~~l~~~~gs~~~~~l~~~~ 204 (617)
T TIGR01974 125 FSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALA 204 (617)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHhh
Confidence 45667788999999999999999999999988777777899999999999999999999999999999999998775421
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. +.+.........++++|+.+|.|++|||.|+||+|++ |+++++ ++++...+++.|++.|+.. ... ....+...
T Consensus 205 ~--~~~~~~~~~~~~ll~~g~~~K~a~fPfH~WLP~a~~a-Ptpvsall~a~t~v~aGvy~l~R~~~-l~~-~~~~~~~~ 279 (617)
T TIGR01974 205 P--GADFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEG-PTPVSALIHAATMVTAGVYLVARTSP-LFE-LSPTALYL 279 (617)
T ss_pred c--cccchHHHHHHHHHHHHHHHHhhhccchhhhhhhccC-CCHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhHHHHHH
Confidence 1 1111123344566788999999999999999999965 666666 5555554555666778742 221 12234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++||||++|+||+++++... +..++++|+++|++.+..+|+..+.
T Consensus 280 l~~lg~lt~l~g~~~al~q~dlKrllAySsisqlG~m~~~l~~~-----------~~~~a~~hl~~Ha~~ka~LFl~aG~ 348 (617)
T TIGR01974 280 VTIIGAITALFAATVALVQNDIKRILAYSTCSQLGYMFLALGVG-----------AYAAAIFHLMTHAFFKALLFLGAGS 348 (617)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999988642 3467899999999999999999987
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.++.+ .++...+.++++++++. |.
T Consensus 349 ii~~~-~~~~~i~~~ggl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~l 427 (617)
T TIGR01974 349 VIHAM-HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSF 427 (617)
T ss_pred HHHHh-CCCCCHHHhcCchhhhHHHHHHHHHHHHHHhhchhhchHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 76653 24678899999999999999999999999999999999999999999999876 56666777888899888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 428 r~~ 430 (617)
T TIGR01974 428 RLI 430 (617)
T ss_pred HHH
Confidence 876
|
This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. |
| >PF00361 Oxidored_q1: NADH-Ubiquinone/plastoquinone (complex I), various chains; InterPro: IPR001750 NADH:ubiquinone oxidoreductase (complex I) (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=361.61 Aligned_cols=270 Identities=35% Similarity=0.611 Sum_probs=233.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhhccCChh
Q psy5224 598 GNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCS 677 (1178)
Q Consensus 598 s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~~~~~~ 677 (1178)
|+|++.+|+++|+++++.+.++..+++++++.++++||+++|.+|+.++++|+...+..+|++++++... ...++.
T Consensus 1 S~~~~~~~v~~E~~~l~~~~li~~~~~~~~~~~~~~ky~i~~~~~s~~ll~g~~~~~~~~g~~~~~~~~~----~~~~~~ 76 (270)
T PF00361_consen 1 SSDLFLFWVFLELMSLSSFLLILFSGTSPSSIEAALKYFIIQSLGSVLLLLGIILLYAFTGSLNFSDLFL----SPFSNS 76 (270)
T ss_dssp BSBSHHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CCCHHHH-----TT-TC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccc----cccccc
Confidence 6899999999999999999999888877789999999999999999999999999999999999987765 233445
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHHHHHHHH
Q psy5224 678 VLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSL 757 (1178)
Q Consensus 678 ~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ls~ 757 (1178)
.......++++|+.+|+|++|||.|+||+|+++|+..+.++++++|+.+++.+.|+..... ....+..++..++++|+
T Consensus 77 ~~~~~~~l~~~g~~iKlg~~PfH~Wl~~~~~~~~~~~~~~ls~~~~~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~s~ 154 (270)
T PF00361_consen 77 TSPLGLILILLGFLIKLGLFPFHFWLPDVYESAPPPVSALLSGVQKKLGLYGLLRFFSLLF--LSPFWSNILLILGLISI 154 (270)
T ss_dssp HHHHHHHHHHHHHHHHHT-TTSTTHHHHHHHHSHHHHHHHHHTTHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhhhccccccccccccccccccccccceeeeccccc--cccccccccccccchhh
Confidence 6677888999999999999999999999999999999999999999999999999876544 33455678999999999
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy5224 758 IIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKT 837 (1178)
Q Consensus 758 ~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~~~~~~~ 837 (1178)
++|++.++.|+|+||++|||||+|+||+++++...+. .+..++++|++.|.+.+..+|..++.++++. +.
T Consensus 155 l~g~~~al~q~d~krllaySSi~~~g~i~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~lF~~~~~~~~~~--~~ 224 (270)
T PF00361_consen 155 LYGSIMALKQKDLKRLLAYSSISQMGWILLGILSLNS--------YGLTGALFYLISHSLSKALLFLLAGAIYRRY--GT 224 (270)
T ss_dssp HHHHHHHTT-SBHHHHHHHHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--T-
T ss_pred hhhHHhhhccccccccccccccccccccccccccccc--------cccccccccccccccchhhhhhhhccccccc--hh
Confidence 9999999999999999999999999998777655432 3456889999999999999999999888887 68
Q ss_pred chhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHH
Q psy5224 838 DELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883 (1178)
Q Consensus 838 ~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~ 883 (1178)
+++++++|..+++|.....+.++.++++|+||+.||++|+++++++
T Consensus 225 ~~~~~~~g~~~~~p~~~~~~~~~~lsl~G~Pp~~gF~~K~~il~~m 270 (270)
T PF00361_consen 225 RNISKLSGLFRKMPFLSLLFLLGLLSLAGLPPFSGFFSKWLILSSM 270 (270)
T ss_dssp -BGGG-SSGTTTSHHHHHHHHHHHHHHCT-TTSHHHHHHHHHHHH-
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhCC
Confidence 8899999999999999999999999999999999999999999864
|
6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This domain is found in the NADH:ubiquinone oxidoreductase (complex I) and NADH-plastoquinone oxidoreductase [].; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport, 0055114 oxidation-reduction process; PDB: 3RKO_D. |
| >MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=366.35 Aligned_cols=280 Identities=30% Similarity=0.461 Sum_probs=237.8
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
..+...|+|++.+|+++|+++++++.++.. ++++++.|++.||+++|.+||.++++|+.+.|..+|+++++++.+
T Consensus 17 ~~~~~~s~~~~~~wv~~El~~l~~~~Li~~-~~~~~~~~a~~kYfl~~~~~s~~lLl~~~~~~~~~g~~~~~~l~~---- 91 (346)
T MTH00112 17 TIITISSNHWLMAWTGLEINTLAIIPLISK-PHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTN---- 91 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHhh----
Confidence 455678899999999999999999999865 445678999999999999999999999999888889988865532
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.....+++.|+++|+|++|||.|+||+|+++||..+.++++++|++|+.++.+... ......+.+
T Consensus 92 --------~~~~~ll~~~l~~K~gl~PfH~Wlp~v~~~~~~~~~~ll~~~~K~~~~~ll~~~~~-------~~~~~~l~~ 156 (346)
T MTH00112 92 --------PTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN-------SLNPTLLLT 156 (346)
T ss_pred --------HHHHHHHHHHHHHHHHhchhhccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH-------HhhHHHHHH
Confidence 12345677899999999999999999999999999999999999999988744311 011346678
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.+++|+|+||++||||++|+||+++++... ...+.+|.+.|.+.+..+|.... +
T Consensus 157 l~~ls~i~g~~~al~q~~lKrlLAySSI~~~G~il~~~~~~------------~~~~~~~~~~y~~~~~~lf~~~~---~ 221 (346)
T MTH00112 157 LAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS------------PKLTLLTFYIYILMTTPMFLTLN---T 221 (346)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 89999999999999999999999999999999999987531 13446677788888888776432 2
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
. +++++++++|+.+++|.....+.++.++++|+||+.||++||.+++++.+.+.+++.++++++|+++.+ |.|+.
T Consensus 222 -~--~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~gF~~K~~il~~~~~~~~~~l~~il~l~S~~sl~~ylri~ 297 (346)
T MTH00112 222 -T--STKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLT 297 (346)
T ss_pred -h--CcccHHHHHhHHhhhHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 566788888999999999999999999999999999999999999999998888888888889999999 89986
|
|
| >MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=384.82 Aligned_cols=298 Identities=24% Similarity=0.325 Sum_probs=247.2
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++...+.|+|++.+|++||..++++|.++..+++++++.+|+.||++++.+|+.++++|+.++|..+|+++++++....
T Consensus 124 ~~m~~l~~s~nl~~l~v~~E~~~l~sy~Li~~~~~~~~~~~aa~ky~l~~~vgs~~lL~gi~~l~~~~gs~~~~~l~~~~ 203 (598)
T MTH00066 124 IAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN 203 (598)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHheeeeeeeCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCccHHHHHHhc
Confidence 45667788999999999999999999999987777777899999999999999999999999999999999997764311
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. +. ......+++++..|.|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+... ... ...+..+
T Consensus 204 --~--~~---~~~~~~l~l~~~~K~a~~PfH~WLP~a~~a-PtpvSallhs~~~v~agvy~liR~~~~-~~~-~~~~~~~ 273 (598)
T MTH00066 204 --D--NS---TLPLLGLILAAAGKSAQFGLHPWLPAAMEG-PTPVSALLHSSTMVVAGIFLLIRFHPL-LEN-NQTALTI 273 (598)
T ss_pred --c--ch---HHHHHHHHHHHHHHhhhccCCcchHhHhcC-CcHHHHHHHHHHHHHHHHHHHHhhHHh-Hhh-hHHHHHH
Confidence 1 11 112223456888899999999999999965 77777766 778999999999897422 211 1223356
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|+++|++.+..+|...+.
T Consensus 274 l~~lg~lt~l~g~l~Al~q~dlKrlLAySSIsqlG~m~~~l~~~~-----------~~~a~~hl~~Ha~~k~~lFl~~G~ 342 (598)
T MTH00066 274 CLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ-----------PQLAFFHICTHAFFKAMLFLCSGS 342 (598)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777899999999999999999999999999999999999886421 246789999999999999999988
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-HHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-IWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.+...+.++.+|++|+||+.||++|+.++++..+.+. ++...+.++++++++. |.
T Consensus 343 i~~~~-~~~~di~~~gGl~~~~P~~~~~~~i~~lsl~GiPp~~GF~sK~~il~~~~~~~~~~~~~~i~ll~s~lt~~Y~~ 421 (598)
T MTH00066 343 IIHSL-NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSF 421 (598)
T ss_pred HHHHh-CCCcchHhcCChhhhChHHHHHHHHHHHHHhCCCccccchHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHH
Confidence 86543 256789999999999999999999999999999999999999999999988763 5555666778888888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 422 ri~ 424 (598)
T MTH00066 422 RII 424 (598)
T ss_pred HHH
Confidence 886
|
|
| >MTH00041 ND2 NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=363.78 Aligned_cols=280 Identities=29% Similarity=0.513 Sum_probs=238.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......|+|++.+|+++|++++++++++.. +.++++.|+++||+++|.+||.+++.|+.+.|..+|++++.+.
T Consensus 17 ~~~~~~s~~~~~~wv~lEl~tl~~~~li~~-~~~~~~~~a~~kYfliq~~gs~~lL~~~~~~~~~~gs~~~~~~------ 89 (349)
T MTH00041 17 TIIVISSNHWFLIWLGLELNTLSIIPILSS-NFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGP------ 89 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccch------
Confidence 455678899999999999999999999865 4556789999999999999999999999998888888766422
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.......++++|+++|+|++|||.|+||+|+++|+....++++.||++|++.+.+... .....++.+
T Consensus 90 ------~~~~~~~li~~~l~~Klgl~PfH~Wlp~v~~~~~~~~~~~l~~~~Ki~pl~ll~~~~~-------~~~~~~l~~ 156 (349)
T MTH00041 90 ------LNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISN-------LLNSNILIL 156 (349)
T ss_pred ------HHHHHHHHHHHHHHHhcCCCcchhhHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHH
Confidence 1123446788899999999999999999999999999999999999999988755421 112456778
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.+++|+|+||++||||++|+||+++++.. +...+++|++.|.+.+..+|.... +
T Consensus 157 l~~ls~i~g~~~~l~q~~~KrlLAySSI~h~G~il~~l~~------------~~~~~~~~~~~y~i~~~~lFl~~~---~ 221 (349)
T MTH00041 157 CGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAY------------SPNASIIMFLIYIIINTSIFLIGN---N 221 (349)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 9999999999999999999999999999999999998753 123567788999999888886543 1
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
.+++++++++|+.+++|.....+.++.+|++|+||+.||++|+.+++++.+.+.+.+..+++++|+++.. |.|+.
T Consensus 222 ---~~~~~l~~l~gl~~~~p~~~~~~~l~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~lli~S~~sl~~ylri~ 297 (349)
T MTH00041 222 ---FSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRIS 297 (349)
T ss_pred ---cCcCCHHHHHhHHhhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2566788888999999999999999999999999999999999999999998877777778889999999 89986
|
|
| >MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=384.57 Aligned_cols=298 Identities=22% Similarity=0.332 Sum_probs=249.6
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..++.++|++.+|++||...+++|.++..+++++++.+|++||++++.+|+.+++.|+.++|..+|++++++.....
T Consensus 121 ~~m~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~~~~~~A~~k~~i~~~iG~~~ll~gi~~l~~~~gs~~~~~~~~~~ 200 (597)
T MTH00211 121 IFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN 200 (597)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHheeeeeEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhc
Confidence 45566788999999999999999999999988777777899999999999999999999999999889999997764321
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. . . .....++++|++.|.|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+... .+. ...+..+
T Consensus 201 ~-----~-~-~~~~~lll~~~~~Ksa~~PfH~WLP~A~~a-PtpvSallhs~t~v~aGvylliR~~~~-~~~-~~~~~~~ 270 (597)
T MTH00211 201 L-----D-L-TLFLLGLLLAAMGKSAQFGFHPWLPSAMEG-PTPVSALLHSSTMVVAGVFLLIRLSPL-FQN-NQLILGA 270 (597)
T ss_pred c-----c-H-HHHHHHHHHHHHHhhhhccCCCCCchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cHHHHHH
Confidence 1 1 1 233455778999999999999999999965 66666666 777899999998897532 221 2234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|+.|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 271 l~~lg~lt~l~g~l~al~q~DlKrllAySSisqlG~m~~~l~~~~-----------~~~a~~hl~~Ha~~Ka~LFl~~G~ 339 (597)
T MTH00211 271 VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ-----------PQLAFLHICTHAFFKAMLFMCSGS 339 (597)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999886432 246899999999999999999886
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+ ..+...+.++++++++. |.
T Consensus 340 ii~~~-~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~GiPp~~GF~sK~~il~~~~~~~~~~~~~~~~~l~s~lt~~Y~l 418 (597)
T MTH00211 340 IIHGL-NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSF 418 (597)
T ss_pred HHHHh-CCCchHHHhCCccccchHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 64432 36788999999999999999999999999999999999999999999999865 34555667788888888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 419 rl~ 421 (597)
T MTH00211 419 RLI 421 (597)
T ss_pred HHH
Confidence 876
|
|
| >MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=378.40 Aligned_cols=296 Identities=20% Similarity=0.307 Sum_probs=243.2
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++..++.++|++.+|++||..++++|.++..++ ++++.+|+.||+++|.+|+.++++|+.+.+ .+|++++.+..
T Consensus 94 ~~m~~lv~s~nl~~l~v~wE~~~l~sy~Li~~~~-~~~s~~a~~ky~l~~~vgs~~lLlgi~~l~-~~gs~~~~~~~--- 168 (564)
T MTH00209 94 LSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQ-NSKSLSAGMLTALTNRVGDALLILSIAWML-MHGNWNIFYLN--- 168 (564)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCchHHHHh---
Confidence 4566678899999999999999999999997654 456889999999999999999999998876 56888775432
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~l-ls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.+........+++++|+..|.|++|||.|+||+|+ +|++++++ +++++|+++.+++.|+.....+ ...++.+
T Consensus 169 ----~~~~~~~~~~~ll~~g~~~Ksa~fPfH~WLP~a~~-aPtpvSallhss~~v~agvylliR~~~~~~~--~~~~~~~ 241 (564)
T MTH00209 169 ----FNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMA-APTPVSALVHSSTLVTAGVYLLIRFFPSLFS--SPFFSMS 241 (564)
T ss_pred ----ccchHHHHHHHHHHHHHHHHHHHccchhhhhhhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 11112233445567799999999999999999985 66666666 5888999999999887543221 1234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|...+.
T Consensus 242 l~~lg~lT~l~g~l~Al~q~dlKriLAySSIsqlG~m~~~l~~~~-----------~~~alfhll~ha~~k~~LFl~~G~ 310 (564)
T MTH00209 242 LLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQ-----------PELAFFHLITHALFKALLFICAGN 310 (564)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999886431 246889999999999999998886
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHH-HHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL-LLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~-~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++.+++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+..+.. ++.++++++++. |.
T Consensus 311 ii~~~-~~~~di~~lgGl~~~~P~~~~~~~i~~lsL~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~l~~l~s~lt~~Y~l 389 (564)
T MTH00209 311 IIHSH-GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSM 389 (564)
T ss_pred HHHHh-CCCccHHHhcChhhhhHHHHHHHHHHHHHHhcchhhchhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 65433 3578899999999999999999999999999999999999999999999987755433 456678888888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 390 rl~ 392 (564)
T MTH00209 390 RLS 392 (564)
T ss_pred HHH
Confidence 886
|
|
| >MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=357.64 Aligned_cols=284 Identities=20% Similarity=0.286 Sum_probs=239.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhh
Q psy5224 275 ILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354 (1178)
Q Consensus 275 ~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~ 354 (1178)
....++.+.+.++|++.+|+++|+.+++.+.++..++++++.+++.||+++|.+||.++++|....+. +..
T Consensus 6 ~~~~~~~~~~~s~n~~~~wv~~El~~l~~~~li~~~~~~~~~~~~~kYfii~~v~s~~lL~g~~l~~~---------~~~ 76 (323)
T MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS---------NLY 76 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHH
Confidence 45568899999999999999999999999999988777777899999999999999999998443221 110
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q psy5224 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434 (1178)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~ 434 (1178)
.......++++|+.+|+|++|||.|+||+|+++|+....+++ +..|++.+.++|+.. ....++.
T Consensus 77 -------~~~~~~~l~~~gl~~Klg~~PfH~Wlp~~~~~~~~~~~~ll~-~~~K~~~~~ll~~~~--------~~~~~l~ 140 (323)
T MTH00197 77 -------LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFNS--------SSFMGLL 140 (323)
T ss_pred -------HHHHHHHHHHHHHHHHhCCCcccccHHHHHcCCCHHHHHHHH-HHHHHHHHHHHHHHH--------HhHHHHH
Confidence 112345567789999999999999999999998877776665 578999988888421 1246678
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q psy5224 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514 (1178)
Q Consensus 435 ~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l 514 (1178)
.+|++|+++|++.|++|+|+||++||||++|+||+++++..+.. ....|.+.|.+.+..+|. ++++++++++
T Consensus 141 ~lgi~S~~~g~~~al~q~dlKrlLAySSI~~~G~~l~~~~~~~~----~~~~~~~~y~l~~~~l~~----i~~~~~~~~l 212 (323)
T MTH00197 141 ICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPS----IFMLYYLIYFVIMFMLFL----FLSKNNLSSL 212 (323)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHH----HHHHHhHhhH
Confidence 89999999999999999999999999999999999999876443 345677788888877774 4578899999
Q ss_pred hcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 515 ~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++++|+.+++|..+..+.++.++++|+||+.||++|+.+++++.+.+. ....++.++++++..||+|..++.++++.
T Consensus 213 ~~~~gl~~~~~~~~~~~~i~~lsl~GlPpf~gF~~K~~il~~~~~~~~~~l~~~~ll~S~ls~~~ylri~~~~~~~~~ 290 (323)
T MTH00197 213 NQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSN 290 (323)
T ss_pred HHHhCccccchHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987663 45667788999999999999999888764
|
|
| >PRK06589 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=373.88 Aligned_cols=294 Identities=24% Similarity=0.375 Sum_probs=237.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccchhhHHHHhhhccC
Q psy5224 596 ISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGI-LSSGFMLYGISILYGITGTLELQSIFNVIKLNNI 674 (1178)
Q Consensus 596 ~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~-~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~~~ 674 (1178)
..++|++.+|+++|+++++++.++..+ +++++.|+++||++++. .|+.+++.|+.++|..+|++|+++.... . .
T Consensus 133 ~~s~dl~~l~v~~El~~l~~~~Li~~~-~~~~~~~aa~kY~~i~~~~s~~~lL~gi~~~y~~~gt~~~~~~~~~---~-~ 207 (489)
T PRK06589 133 ALSSDLFTMFVCYELLTISTAFLIGHT-RNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLF---S-K 207 (489)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHhhhhhh---c-c
Confidence 368899999999999999999999654 45568999999996655 5557788999999999999999765321 1 1
Q ss_pred ChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHhhhhh-h---HhHHHH
Q psy5224 675 NCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST--TPKLSLFVIIYRLLIKCLLPL-V---INWQKI 748 (1178)
Q Consensus 675 ~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~--~~k~~~~~~l~~~~~~~~~~~-~---~~~~~~ 748 (1178)
+. .....++++++.+|+|++|||.|+|+. .++|+++++++++ ++|.+.+. +.|+.....+.. . .....+
T Consensus 208 ~~---~~~~~ll~~~~~~K~glfPfH~WlP~~-~~ap~~vsall~~~~~~k~g~y~-l~Ri~~~~~~~~~~~~~~~~~~~ 282 (489)
T PRK06589 208 NQ---SIILLLMFIYGIAKTAIFPVHSWLPAA-MVAHYPVSALLHAVIVVKTGLFC-IYKILLYIFGLSYLQRIFAEFNW 282 (489)
T ss_pred cH---HHHHHHHHHHHHHHHhhccchhhcccc-ccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHcChhHHHHHHhHHHH
Confidence 11 123345667888999999999999955 5679999999987 56666554 557654333211 1 112356
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..++++|+++|++.+++|+|+||++|||||+|+||+++++...+ ..+..++++|+++|.+.+..+|+..+.
T Consensus 283 l~~l~~ls~~~g~~~al~q~dlKrlLAYSSIsq~G~i~l~l~~~~--------~~~~~~al~~~~~h~l~k~~LFl~~G~ 354 (489)
T PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILT--------PKALGAAILHLVSHSFAKICLFYSMGS 354 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999875422 235678899999999999999999999
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchH----HHHHHHHHHHHHHHh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI----WLLLLIIMCSLIGAK 904 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~----~l~~l~ll~s~~~~~ 904 (1178)
+.+++ +++++++++|+.+++|.....+.++.+|++|+||+.||++||+++++..+.+.+ +..++++++|++++.
T Consensus 355 i~~~~--g~~~i~~l~gl~~~~p~~~~~f~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~~~~~~ll~s~ls~~ 432 (489)
T PRK06589 355 IYSLK--KEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSAL 432 (489)
T ss_pred HHHHh--CcccHHHccChHhhHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 88776 788899999999999999999999999999999999999999999999998764 234456778999888
Q ss_pred -hhhhc
Q psy5224 905 -GGRII 909 (1178)
Q Consensus 905 -~~r~~ 909 (1178)
|.|++
T Consensus 433 y~~ri~ 438 (489)
T PRK06589 433 YLLKIL 438 (489)
T ss_pred HHHHHH
Confidence 78887
|
|
| >MTH00151 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=377.63 Aligned_cols=295 Identities=21% Similarity=0.297 Sum_probs=243.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++...+.|+|++.+|++||..++++|.++..++ ++++.|+++||+++|.+|+.++++|+.+.| .+|++|+.++.+
T Consensus 96 ~sm~~lv~s~nl~~l~v~wE~~~l~sy~Li~~~~-~~~s~~a~~kyfi~~~vgs~~lL~gi~~l~-~~gs~~~~~~~~-- 171 (565)
T MTH00151 96 LSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQ-NKKSLSAGMLTALTNRIGDVLILLSIALLV-LLGHWSILSMWD-- 171 (565)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCccHHHHhh--
Confidence 3556678899999999999999999999998765 457899999999999999999999998887 578888865431
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.+.......++++|+..|.|++|||.|+||+|+ +|+++++ ++++.+|+++.+++.|+..... . ...+..+
T Consensus 172 ------~~~~~~~~~ll~~g~~~Ksa~~PfH~WLP~a~~-aPtpvSall~ss~~v~agvylLiR~~~~~~-~-~~~~~~~ 242 (565)
T MTH00151 172 ------FKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMA-APTPVSALVHSSTLVTAGVFLLIRFFPFLS-S-SSGFSSF 242 (565)
T ss_pred ------hhhHHHHHHHHHHHHHHHhhhccchhhhhhhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHH
Confidence 011222334466799999999999999999995 6666666 4688889999999988853321 1 2234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 243 l~~lg~lT~l~g~l~Al~Q~dlKrlLAySSisqlG~m~~~l~~g~-----------~~~al~hl~~Ha~~k~lLFl~~G~ 311 (565)
T MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGM-----------PSLALFHLYTHALFKALLFLCAGS 311 (565)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999886432 236789999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-HHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-IWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.+++ ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+. ++...+.++++++++. |.
T Consensus 312 ii~~~-~~~~di~~lggl~~~~P~~~~~~~i~~lsL~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~l~~l~s~lt~~Y~l 390 (565)
T MTH00151 312 IIHSS-SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSA 390 (565)
T ss_pred HHHHh-CCcchHHHhcChhhhhHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 65432 267889999999999999999999999999999999999999999999997654 4555667788899888 68
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 391 r~~ 393 (565)
T MTH00151 391 RLS 393 (565)
T ss_pred HHH
Confidence 886
|
|
| >MTH00011 ND2 NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=357.47 Aligned_cols=290 Identities=20% Similarity=0.294 Sum_probs=240.0
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhh
Q psy5224 276 LSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQ 355 (1178)
Q Consensus 276 ~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~ 355 (1178)
+..+....+.++|++.+|+++|+++++++.++..++++++.|++.||+++|.+||.++++|+...|...+ .
T Consensus 15 ~~~~~~~~~~s~~~~~~wv~lEl~~i~~~~li~~~~~~~~~~aa~kYfl~~~~gS~~lL~gi~~~~~~~~-------~-- 85 (330)
T MTH00011 15 MTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPS-------L-- 85 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------H--
Confidence 4557788889999999999999999999999988888888999999999999999999999876543211 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHH
Q psy5224 356 LSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIIT 435 (1178)
Q Consensus 356 ~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~ 435 (1178)
.+.....++++|+.+|+|++|||.|+||+|+++|++.+.++++ ..|++.+.++|+..+ ....+++..
T Consensus 86 ------~~~~~~~l~~~~l~~KlG~~PfH~Wlp~~~~~~~~~~~~lls~-~~K~~p~~ll~~~~~------~~~~~~l~~ 152 (330)
T MTH00011 86 ------LKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILST-WQKIAPLSILFFFTS------HNILPMMTS 152 (330)
T ss_pred ------HHHHHHHHHHHHHHHHHhcchHHhhHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHh------hhhHHHHHH
Confidence 0112345667899999999999999999999999999998886 578888888875321 122457788
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q psy5224 436 LSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515 (1178)
Q Consensus 436 ~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~ 515 (1178)
++++|+++|++.|++|+|+||++|||||+|+||++++... +..++++|++.|.+.+..+|...+.... ++.+
T Consensus 153 l~~ls~l~g~~~al~q~dlK~llAySSI~h~g~il~~~~~----~~~~~~~~~~~y~~~~~~lf~~~~~~~~----~~~~ 224 (330)
T MTH00011 153 MAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVF----SPSMAILYFMTYIIITTPLMLLFAYLNA----FSTK 224 (330)
T ss_pred HHHHHHHHHHHHHHhHHhHHHHHHHHhHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHHHHHHH----ccHH
Confidence 9999999999999999999999999999999999877533 4567999999999999999999886532 2344
Q ss_pred cccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy5224 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLGQMI 594 (1178)
Q Consensus 516 ~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ll 594 (1178)
+.++..+..|..+..+.+..++++|+||+.||++|+.++.++.+.+. ....+..++++++..||+|+.++.++++....
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~lsl~GlPPf~gF~~K~~il~~~~~~~~~~~~~il~l~S~lsl~~ylri~~~~~~~~~~~~ 304 (330)
T MTH00011 225 FNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFS 304 (330)
T ss_pred HHhhHhhcCHHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 55667778899999999999999999999999999999999987653 45566778999999999999887777655433
Q ss_pred h
Q psy5224 595 M 595 (1178)
Q Consensus 595 ~ 595 (1178)
.
T Consensus 305 ~ 305 (330)
T MTH00011 305 S 305 (330)
T ss_pred c
Confidence 3
|
|
| >MTH00105 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=361.88 Aligned_cols=280 Identities=29% Similarity=0.496 Sum_probs=235.3
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
.+....|+|++.+|+++|++++++++++. +++++++.|+++||+++|++||.++++|+...|..+|++++.+..+
T Consensus 17 ~~~~~~s~n~~~~wv~~El~~l~~~~li~-~~~~~~~~~a~~kYfi~q~~~S~~lL~~i~~~~~~~g~~~~~~~~~---- 91 (347)
T MTH00105 17 TMITMISSHWLLAWIGLEMNMLAIIPILM-KKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTN---- 91 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHhhhh----
Confidence 35557899999999999999999998874 4566678999999999999999999999999888889887754321
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.....+++.|+++|+|++|||+|+||+|+++|+..+.+++++||++|+..+.+.. + ......+..
T Consensus 92 --------~~~~~l~~~~l~~K~g~~PfH~Wlp~v~~~~~~~~~~~l~t~~Ki~p~~i~~~~~----~---~~~~~~l~~ 156 (347)
T MTH00105 92 --------PTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQIS----P---SINPNLLLT 156 (347)
T ss_pred --------HHHHHHHHHHHHHHhCCChhhcCHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHH----h---hhhHHHHHH
Confidence 1234567889999999999999999999999999999999999999998764321 1 111246778
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.+++|+|+||++||||++|+||+++++... ...+.+|.+.|.+.+..+|......
T Consensus 157 l~~~s~~~g~l~~l~q~~lK~llAySSI~~~G~~l~~~~~~------------~~~~~~~~~~y~~~~~~lf~~~~~~-- 222 (347)
T MTH00105 157 LAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYN------------PTLTLLNLLIYIIMTLTMFMLLMLN-- 222 (347)
T ss_pred HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 89999999999999999999999999999999999877431 1234677888888877777654422
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+++++++++|+.+++|.....+.++.++++|+||+.||++||.++++..+.+.+.+..+++++|+++.+ |.|+.
T Consensus 223 ----~~~~~~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~l~~~l~l~S~isl~~Ylr~~ 297 (347)
T MTH00105 223 ----SSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLI 297 (347)
T ss_pred ----hhccHHHHHhHhhccHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355678888999999999999999999999999999999999999999998877777788889999999 89986
|
|
| >MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=362.04 Aligned_cols=280 Identities=25% Similarity=0.471 Sum_probs=234.3
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+...+|+|++.+|+++|+++++++.++.. ++++++.|+++||+++|++||.++++|+...|..+|+++++++..
T Consensus 16 ~~~~~~~s~~~~~~wv~~El~~l~~~~Li~~-~~~~~~~~a~~kYfi~q~~~s~~~L~~~~~~~~~~g~~~~~~~~~--- 91 (347)
T MTH00135 16 GTTLTFASSHWLLAWMGLEINTLAIIPLMAQ-HHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSH--- 91 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHhh---
Confidence 3456678999999999999999999999864 455678999999999999999999999998888889888765432
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.....++++|+++|+|++|||+|+||+|++++|..+.+++++||++|+..+.+.. + ....++.
T Consensus 92 ---------~~~~~l~~~~l~~KlG~~PfH~Wlp~~~~~~~~~~~~ll~t~~K~~p~~ll~~~~----~----~~~~~l~ 154 (347)
T MTH00135 92 ---------PLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIA----P----TNPTLLI 154 (347)
T ss_pred ---------HHHHHHHHHHHHHHHhhccccccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH----H----hhHHHHH
Confidence 1223567789999999999999999999999999999999999999988764321 1 1234667
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.|++|+|+||++|||||+|+||+++++... ...++.|.+.|.+.+..+|....
T Consensus 155 ~~~~~s~~~g~~~~l~q~~lK~llAySSI~~~g~~l~~~~~~------------~~~~~~~~~~Y~l~~~~lf~~~~--- 219 (347)
T MTH00135 155 TLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFS------------PSLTLLALLTYIIMTSSAFLTFK--- 219 (347)
T ss_pred HHHHHHHHHHHHHhHhHHhHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHH---
Confidence 889999999999999999999999999999999999987532 12355666777777777775432
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+ . +.+++++++|+.+++|.....+.++.++++|+||+.||++||.++++..+.+.+++..+++++|+++.+ |.|+.
T Consensus 220 ~-~--~~~~i~~~~g~~~~~p~~~~~~~~~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~l~~~s~~sl~~Yl~~~ 296 (347)
T MTH00135 220 L-N--SSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLS 296 (347)
T ss_pred H-h--hhhhHHHHHhHHhhCHHHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 466788888999999999999999999999999999999999999999988777777778889999999 88885
|
|
| >MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=360.49 Aligned_cols=281 Identities=28% Similarity=0.515 Sum_probs=235.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+...+|+|++.+|+++|+++++++.++.. ++++++.|++.||+++|.+||.++++|+.+.|..+|+++++++..
T Consensus 16 ~~~~~~~s~~~~~~wv~lEl~~l~~~~l~~~-~~~~~~~~a~~kYfi~q~~~S~~~L~g~~~~~~~~g~~~~~~l~~--- 91 (346)
T MTH00070 16 GTMITLSSNHWFLAWMGLEINTLAIIPLMTK-THHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQT--- 91 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH---
Confidence 3456678999999999999999999999864 445568999999999999999999999998888889988866532
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.....++.+|+++|+|++|||.|+||+|+++|+..++++++.||++|+..+.+... . .....+.
T Consensus 92 ---------~~~~~l~~~~l~~K~g~~PfH~Wlp~~~~~~~~~~~~ll~~~~K~~~~~ll~~~~~----~---~~~~~l~ 155 (346)
T MTH00070 92 ---------PLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH----L---LNSNLLI 155 (346)
T ss_pred ---------HHHHHHHHHHHHHHHccCcccccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH----h---hhHHHHH
Confidence 01235678899999999999999999999999999999999999999987644321 0 1124667
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
.+|++|+++|++.+++|+|+||++||||++|+||+++++... ......|.+.|.+.+..+|......
T Consensus 156 ~l~~ls~i~g~~~al~q~~lK~llaySSI~~~G~~l~~~~~~------------~~~~~~~~~~y~~~~~~lf~~~~~~- 222 (346)
T MTH00070 156 IMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS------------PHLTLLNLLIYLIMTSSMFLMLMNL- 222 (346)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 889999999999999999999999999999999999987531 1234566677777777777654321
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+++++++++|+.+++|.....+.++.++++|+||+.||++|+.++++..+.+.+.+.++++++|+++.. |.|+.
T Consensus 223 -----~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~~~~~~~~~~~~~l~l~s~~s~~~ylr~~ 297 (346)
T MTH00070 223 -----NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLS 297 (346)
T ss_pred -----cccCHHHHHhHHHhhHHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888999999999999999999999999999999999999999988777777778889999999 88886
|
|
| >MTH00165 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=377.45 Aligned_cols=298 Identities=22% Similarity=0.314 Sum_probs=245.9
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.+....+.|+|++.+|++||..++++|.++..++ ++++.+++.||+++|.+|+.++++|+.+. ..+|++|+.+..+..
T Consensus 96 ~sm~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~-~~~s~~aa~ky~i~~~vgs~~lL~gi~~l-~~~gs~~~~~~~~~~ 173 (573)
T MTH00165 96 LSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQ-NKKSYNAGMLTALSNRIGDVAILLSIAWM-MNFGSWNFIFYLDFM 173 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCchHHHHHHHh
Confidence 3556678899999999999999999999998654 45789999999999999999999999888 678999887543321
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~l-ls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
. + .........++++|+..|.|++|||.|+||+|+ +|++++++ +++++|+++.+++.|+.... +. ..+..+
T Consensus 174 ~--~--~~~~~~~~~ll~~~~~~K~a~~PfH~WLP~a~~-aPtpvSall~ss~~v~agvy~liR~~~~~-~~--~~~~~~ 245 (573)
T MTH00165 174 K--N--SFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVHSSTLVTAGVYLLIRFNNLL-FS--SFFSKF 245 (573)
T ss_pred c--c--ccHHHHHHHHHHHHHHHHHhhccchHhhccccC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-hH--HHHHHH
Confidence 1 1 112233445677899999999999999999995 67777665 57888999999988875322 11 234567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+..+|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 246 l~~lg~lT~l~g~~~al~q~dlKrllAySSisqlG~m~~~i~~~~-----------~~~a~~~l~~Ha~~ka~LFl~~G~ 314 (573)
T MTH00165 246 LLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGF-----------PKLAFFHLLTHALFKALLFLCAGS 314 (573)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999886422 246789999999999999999987
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-HHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-IWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+. ++...+.++++++++. |.
T Consensus 315 ii~~~-~~~~~i~~l~gl~~~~P~~~~~~~i~~lsL~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~l 393 (573)
T MTH00165 315 IIHNM-SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSF 393 (573)
T ss_pred HHHHc-CCCccHHHhhChhhhhHHHHHHHHHHHHHHhhChhhhhhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 65542 367889999999999999999999999999999999999999999999987653 4555667788888888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|++
T Consensus 394 r~~ 396 (573)
T MTH00165 394 RLI 396 (573)
T ss_pred HHH
Confidence 886
|
|
| >MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=376.82 Aligned_cols=301 Identities=21% Similarity=0.326 Sum_probs=246.3
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHH
Q psy5224 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNV 668 (1178)
Q Consensus 589 g~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~ 668 (1178)
-.++..++.++|++.+|++||..++++|.++..|++++++.+|+.||++++.+|+.++++|+.++|..+|+++++++...
T Consensus 129 ~~~m~~lv~s~nl~~~~v~wE~~~l~sy~LI~~~~~~~~~~~Aa~k~~i~~~igs~~lL~gi~~l~~~~gs~~~~~l~~~ 208 (611)
T MTH00137 129 LIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFAL 208 (611)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHh
Confidence 34566778899999999999999999999998888787899999999999999999999999999999999999766431
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
. .... . ......+++++..|+|++|||.|+||+|++ |+++++++ ++.+|+++.+++.|+... .+. ...+..
T Consensus 209 ~--~~~~--~-~~~~~~l~l~~~~K~a~fPfH~WLP~a~ea-PtpvSall~s~~~v~aGvylliR~~~~-~~~-~~~~~~ 280 (611)
T MTH00137 209 S--KDFD--L-TLPLLGLILAATGKSAQFGLHPWLPSAMEG-PTPVSALLHSSTMVVAGIFLLIRLSPL-MEN-NQTALT 280 (611)
T ss_pred h--cccc--h-HHHHHHHHHHHHHHHhhccCcccchhhccC-CchHHHHHHHHHHHHHHHHhhhhhHHh-hhh-hHHHHH
Confidence 1 1111 1 112233556788899999999999999965 66666666 888999999999887422 211 122335
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
.+.++|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|...+
T Consensus 281 ~l~~lg~lt~l~g~l~al~q~dlKrllAySSisqlG~m~~~l~~~~-----------~~~a~~hll~Ha~~ka~lFl~~g 349 (611)
T MTH00137 281 TCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ-----------PQLAFLHICTHAFFKAMLFLCSG 349 (611)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677999999999999999999999999999999999999886421 24679999999999999999998
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-h
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK-G 905 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~-~ 905 (1178)
.+.++. ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++..+.+ .++...+.++++++++. |
T Consensus 350 ~ii~~~-~~~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~Il~~~~~~~~~~~~~~~~~l~s~lt~~Y~ 428 (611)
T MTH00137 350 SIIHSL-NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYS 428 (611)
T ss_pred HHHHHc-CCcccHHHhCCcccccHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 776543 35678999999999999999999999999999999999999999999988754 34445556778888888 7
Q ss_pred hhhc
Q psy5224 906 GRII 909 (1178)
Q Consensus 906 ~r~~ 909 (1178)
.|+.
T Consensus 429 lR~~ 432 (611)
T MTH00137 429 LRVV 432 (611)
T ss_pred HHHH
Confidence 8886
|
|
| >MTH00200 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=361.00 Aligned_cols=281 Identities=28% Similarity=0.546 Sum_probs=236.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+......|+|++.+|+++|+++++++.++.. ++++++.|++.||+++|.+||.++++|+...|..+|++++.+..+
T Consensus 16 ~~~~~~~s~~~~~~wv~lEl~~l~~~~li~~-~~~~~~~~a~~kYfl~~~~~s~~lL~~~~~~~~~~g~~~~~~~~~--- 91 (347)
T MTH00200 16 GTLLTFSSSHWFLIWLGLEINTLAIIPLLIK-QHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLG--- 91 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHhh---
Confidence 3455678899999999999999999999865 445578999999999999999999999999998889888765422
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
.....++++|+.+|+|++|||.|+||+|+++|+..+++++++||++|+..+.++. . . . ....+.
T Consensus 92 ---------~~~~~li~~~l~~K~g~~PfH~Wlp~v~~~~~~~~~~ll~~~~K~~~~~ll~~~~-~---~-~--~~~~l~ 155 (347)
T MTH00200 92 ---------PLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLA-P---A-L--NSNILL 155 (347)
T ss_pred ---------HHHHHHHHHHHHHHHhhCcHHhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH-H---h-h--hHHHHH
Confidence 1234677889999999999999999999999999999999999999998874431 1 0 0 124677
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
++|++|+++|++.+++|+|+||++|||||+|+||+++++... ...+..|.+.|.+.+..+|....
T Consensus 156 ~~~~ls~~~g~~~~l~q~~lK~llAySSi~~~G~~l~~l~~~------------~~~~~~~~~~y~~~~~~lf~~~~--- 220 (347)
T MTH00200 156 LLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS------------PNLALLYLLLYVIITLTVFLLLN--- 220 (347)
T ss_pred HHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHH---
Confidence 899999999999999999999999999999999999987542 23455677778887777765322
Q ss_pred hccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 831 ~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+. +++++++++|..+++|.....+.++.++++|+||+.||++||.+++++.+.+.+++.++++++|+++++ |.|+.
T Consensus 221 -~~--~~~~~~~l~g~~~~~p~~~~~~~i~~lsl~GlPP~~GF~~K~~il~~l~~~~~~~~~~~~~l~s~~sl~~ylr~~ 297 (347)
T MTH00200 221 -LL--NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLS 297 (347)
T ss_pred -Hh--ccCcHHHHHhHHHhhHHHHHHHHHHHHHHhCCCccccHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 566788889999999999999999999999999999999999999999998877777788889999988 89974
|
|
| >COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=371.16 Aligned_cols=309 Identities=27% Similarity=0.373 Sum_probs=267.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhHH
Q psy5224 588 FVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG-TLELQSIF 666 (1178)
Q Consensus 588 ~g~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~g-s~~~~~~~ 666 (1178)
|...++.+..|+|++.+|++||..++++|.||++|.+++++.++|.|-|+++.+|...+++|++++|..+| +.++.++.
T Consensus 114 F~~sMl~lVlSdNll~l~~~WE~~gl~SyLLIGfw~~~~~a~~aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~ 193 (606)
T COG1009 114 FTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELF 193 (606)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHhhhhcchHHHHHHHHHHHHHHhCccccHHHHh
Confidence 34466777899999999999999999999999999999999999999999999999999999999999999 77777776
Q ss_pred HHhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHH
Q psy5224 667 NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQ 746 (1178)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~ 746 (1178)
...+..+..+.......++++.|-..|.++||||.|+||++++++|..+.+++..+-+++.|++.|+.... . ....+.
T Consensus 194 ~~~~~~~~~~~~~~~~~lll~~Ga~~KSAQfPfH~WLpdAMegPTPVSAliHaATMV~AGvyLvaR~~pif-~-~sp~~~ 271 (606)
T COG1009 194 AAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLF-A-LSPEAL 271 (606)
T ss_pred hhcchhhhcchHHHHHHHHHHHHhhhhhcccchHhhhhhhhcCCChHHHHHHHHHHHHcchhHHhHHHHHh-c-cCHHHH
Confidence 54322333334556677889999999999999999999999998888888878777777777887875332 2 234556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5224 747 KILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVI 826 (1178)
Q Consensus 747 ~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~ 826 (1178)
.++.++|.+|+++|+..|+.|+|+||+||||+++|+|||++++..+. .+..++++|+++|++.|..+|+..
T Consensus 272 ~~v~~vG~iTal~~a~~al~Q~DiKriLAYSTiSQLG~m~~a~Glg~---------~a~~aAifHL~tHA~FKA~LFL~a 342 (606)
T COG1009 272 WLVILVGAVTALLAALIALVQNDIKRILAYSTISQLGYMFVALGLGS---------LAYEAAIFHLVTHAFFKALLFLSA 342 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78889999999999999999999999999999999999998885431 266899999999999999999999
Q ss_pred HHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch---HHHHHHHHHHHHHHH
Q psy5224 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK---IWLLLLIIMCSLIGA 903 (1178)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~---~~l~~l~ll~s~~~~ 903 (1178)
+.+-+.. +++++++++|+.+++|.+...+.++.++++|+||+.||++|-.++++..+.+. .+...+.+++++.++
T Consensus 343 G~vih~~--~trdi~kmggL~k~mPit~~~~~ig~lalaGvpPf~GF~SK~~i~~~~~~~~~~~~~~~~~~~~i~~~~T~ 420 (606)
T COG1009 343 GSVIHAT--GTRDIRKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMILEAALAASHLSGGLLLLLALIGALLTA 420 (606)
T ss_pred chhHHHc--ccccHHHhhcHHHhchHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 9998887 67999999999999999999999999999999999999999999999999873 566666777888888
Q ss_pred hh-hhhc
Q psy5224 904 KG-GRII 909 (1178)
Q Consensus 904 ~~-~r~~ 909 (1178)
.| .|++
T Consensus 421 ~ys~r~~ 427 (606)
T COG1009 421 FYSFRLI 427 (606)
T ss_pred HHHHHHH
Confidence 85 5665
|
|
| >MTH00144 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=353.15 Aligned_cols=272 Identities=26% Similarity=0.475 Sum_probs=228.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
.+....|+|++.+|+++|+++++.+.++..+ +++++.|++.||+++|.+||.+++.|+.+.|..+|++++.
T Consensus 17 ~l~~~~s~~~~~lwv~~El~~i~~~~Li~~~-~~~~~~~a~~kYfii~~~gs~~ll~gi~~~~~~~g~~~~~-------- 87 (328)
T MTH00144 17 TLLSLSSSHWLGVWVGLEINLIGFLPLLVYK-KKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-------- 87 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--------
Confidence 4556788999999999999999999998654 4456899999999999999999999999998887775431
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.++++|+.+|+|++|||.|+||+|+++|+..+.++++++|++|++.+.++.. .......+..
T Consensus 88 ------------~l~~~gl~~Klg~fPfH~Wlp~~~~~~~~~~~~l~~~~~K~~~~~~l~~~~~------~~~~~~~l~~ 149 (328)
T MTH00144 88 ------------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLD------LYWLAYLLCV 149 (328)
T ss_pred ------------HHHHHHHHHHHhccHHhccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH------hhhHHHHHHH
Confidence 4577899999999999999999999999999999999999999988754321 1123467788
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.+++|+|+||++||||++|+||+++++... ....++|.+.|.+.+..+|..+...
T Consensus 150 ~~~ls~i~g~~~al~q~~lKrlLAySSI~~~G~ill~~~~~------------~~~~~~~~l~y~l~~~~lf~~~~~~-- 215 (328)
T MTH00144 150 ISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG------------SWLMWMYFLIYIVSSGFLFFSLWSG-- 215 (328)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhhHhhHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999999999999999999999999999999999988542 2345778899999998888655322
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+.+++++++|..+++|..... .+..++++|+||+.||++|+.++++..+.+.++...+++++|+++.+ |.|+.
T Consensus 216 ----~~~~~~~l~g~~~~~~~~~~~-~~~~lsl~GlPP~~GF~~K~~il~~l~~~~~~~~~~~lll~S~ls~~yylr~~ 289 (328)
T MTH00144 216 ----DSGSMKDLGSLKPSYKTGLSI-ISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVF 289 (328)
T ss_pred ----hhhhHHHHHhhhhccHHHHHH-HHHHHHHcCcccHhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888888887655444 44499999999999999999999999998877777777889999888 89997
|
|
| >cd01642 Arch_FBPase_2 Putative fructose-1,6-bisphosphatase or related enzymes of inositol monophosphatase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=347.31 Aligned_cols=217 Identities=18% Similarity=0.196 Sum_probs=179.1
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEEE
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWII 1000 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wvI 1000 (1178)
+++.+.+++++|++.+++.+++ ...+++.|+++|+||++|+++|+.|++.|++.+|++.|+|||.+.....+++++|+|
T Consensus 1 ~l~~a~~~a~~ag~~i~~~~~~-~~~~i~~k~~~d~vt~aD~~~e~~i~~~L~~~~P~~~ilsEE~g~~~~~~~~~~WiI 79 (244)
T cd01642 1 MLEVLEKITKEIILLLNEKNRQ-GLVKLIRGAGGDVTRVADLKAEEIILKLLREEGVFGQIISEESGEIRKGSGEYIAVL 79 (244)
T ss_pred CHHHHHHHHHHHHHHHHHHhhc-cceeeeecCCCChHHHHHHHHHHHHHHHHHhhCCCCEEEeCCCCCccCCCCCEEEEE
Confidence 4688999999999999987753 346777889999999999999999999999999999999999876433346789999
Q ss_pred eccCCchHHhccCCCeEEEEEEEECCe-EEEEEEEecCCCcEEEE---ecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 1001 DPLDNITNFSHNFPQYCISIALKQKKQ-ITHSVIYDPIRNDLFTA---IKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 1001 DPIDGT~nf~~g~p~~~i~ial~~~g~-pv~gvV~~P~~~~~~~a---~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
||||||+||++|.|.||++||+.++|+ |++|+||+|.+|++|.+ .+++|++.|+++++++.+............ .
T Consensus 80 DPIDGT~NFi~g~P~favsIal~~~g~~~~~gvV~~p~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~ 158 (244)
T cd01642 80 DPLDGSTNYLSGIPFYSVSVALADPRSKVKAATLDNFVSGEGGLKVYSPPTRFSYISVPKLGPPLVPEVPSKIGIYEG-S 158 (244)
T ss_pred eCCcCcHHHHcCCCCeEEEEEEEECCcceEEEEEeccccCccceEEEcccCCeeeecCccccccccccccceEEEEec-C
Confidence 999999999999999999999999998 67999999999999766 567799999999887554443333222221 1
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCccc
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIIS 1144 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~ 1144 (1178)
....+ .......+..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++|||-.+.
T Consensus 159 --~~~~~---~~~~l~~~~~~~R~~GSaaL~l~~vA~G~~D~~~~~~~~~~~WD~AAg~liv~EA~~~~~ 223 (244)
T cd01642 159 --SRNPE---KFLLLSRNGLKFRSLGSAALELAYTCEGSFVLFLDLRGKLRNFDVAAALGACKRLGLHGD 223 (244)
T ss_pred --ccCHH---HHHHHHhccCCeeecCHHHHHHHHHhccceEEEEEcCCCcchHHHhhHHHHHHHhhhcCC
Confidence 11122 222344566789999999999999999999999998 7899999999999999986553
|
These are Mg++ dependent phosphatases. Members in this family may have fructose-1,6-bisphosphatase and/or inositol-monophosphatase activity. Fructose-1,6-bisphosphatase catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. |
| >MTH00094 ND4 NADH dehydrogenase subunit 4; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=355.26 Aligned_cols=289 Identities=19% Similarity=0.325 Sum_probs=239.8
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhhc
Q psy5224 593 MIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLN 672 (1178)
Q Consensus 593 ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~ 672 (1178)
.....++|++.+|+++|+++++++.++..|+.++++.+|++||++++.+||.++++++...+.. .++++.+...
T Consensus 76 ~~~f~s~dl~~fyv~~E~~lip~~~LI~~~g~~~er~~A~~y~~iyt~~~Sl~lL~~i~~~~~~-~~~~~~~~~~----- 149 (403)
T MTH00094 76 LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFF-FSLCYFDFFL----- 149 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-----
Confidence 4447789999999999999999999998899888899999999999999999999988765542 2333332211
Q ss_pred cCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 673 NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 673 ~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
... ...++.+|+++|+|++|||.|+||+|+++|++++++++++ +|.+++.+ .|+..... ......+..
T Consensus 150 ----~~~--~~~~~~~~f~vK~~l~PfH~WlP~a~~eap~~~s~lLa~vl~Klg~~gl-~r~~~~~~----~~~~~~~~~ 218 (403)
T MTH00094 150 ----SWE--MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGF-LRILGSLN----FVYNNFWII 218 (403)
T ss_pred ----HHH--HHHHHHHHHHHHHhHHHHHhcchHhhccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH----HHHHHHHHH
Confidence 011 1356778999999999999999999999999999999985 66666654 47643221 112345667
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
++++|+++|++.|++|+|+||++||||++|+||+++++...+. .+..++++|+++|++.+.++|...+.+++
T Consensus 219 l~~~s~i~g~~~~l~Q~dlKrllAySSvshmg~i~~~l~~~~~--------~~~~ga~~~~i~Hgl~s~~lF~~~g~~~~ 290 (403)
T MTH00094 219 FSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSM--------SGKLSGLMMMLAHGYTSTLMFYLIGEFYH 290 (403)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999876443 46678999999999999999999999888
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+. ++|++++++|+.+++|..+..+.++.++++|+||+.||++|+.++.+.++.+. +...+..+++++++. +.|+.
T Consensus 291 ~~--~sr~i~~l~Gl~~~~P~~~~~~~i~~ls~~G~Pp~~gF~~e~~i~~~~~~~~~-~~~~~~~~~~~~s~~Y~l~~~ 366 (403)
T MTH00094 291 IS--KSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNK-FSFFFIFFYFLVSFYYSLFLI 366 (403)
T ss_pred Hc--CCccHHHhcChhhhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 76 78889999999999999999999999999999999999999999999999875 445556667788887 57765
|
|
| >PRK12664 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=364.10 Aligned_cols=281 Identities=25% Similarity=0.331 Sum_probs=227.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-+.+....|+|++.+|++||+++++++.++..+ +++++.|+++||+++|.+|+.+++.|+...+. .|+.+
T Consensus 74 ~s~l~vv~S~dl~~l~v~~El~sl~s~~LI~~~-~~~~~~~Aa~kYfliq~~gs~llL~gi~~~~~-~g~~~-------- 143 (527)
T PRK12664 74 ISSIAAISSSSLTLVVIGFEFMALSALMIIAAG-CPGGNIGAFIHYACVHFFSGVLLLVGASGQAQ-NGQYT-------- 143 (527)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHH--------
Confidence 345666889999999999999999999998654 45568999999999999999999999876432 12210
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~-~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.....++++|+++|+|++|||.|+||+|+++|++.+++++++ +|++++.++ |++. ...+
T Consensus 144 ----------~~~~~Lil~gl~iK~glfPfH~WLPday~~ap~~~salLS~~~~Kva~~~ll-r~~~---------~~~i 203 (527)
T PRK12664 144 ----------GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLL-LFFS---------GEEI 203 (527)
T ss_pred ----------HHHHHHHHHHHHHHHhhcccHhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHH---------hHHH
Confidence 112356778999999999999999999999999999999997 999888776 5421 1346
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++|||||+|+||+++++....... .+...+++|+++|.+.+..+|...+.
T Consensus 204 Li~lg~lS~i~G~l~AL~Q~dlKRlLAYSSIsq~G~mllgig~~~~~~------~~~~~~l~hli~h~lyk~lLF~~ag~ 277 (527)
T PRK12664 204 LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSG------VAIGILILQIVLSVVYQTLLFMVADS 277 (527)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHcchhH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999999999886532210 12345678999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHH--HH-HHHHHHHHHHHh-
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW--LL-LLIIMCSLIGAK- 904 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~--l~-~l~ll~s~~~~~- 904 (1178)
+.++. +++++++++|+.+ +|.....+.++.+|++|+||+.||++||++++++.+.+... .. ...+.+++..+.
T Consensus 278 v~~~~--g~~~i~~lgGL~~-mP~~~~~fli~~LSLaGlPPf~GF~sK~lIl~a~~~~~~~~~~~~~~~~l~s~~l~~~~ 354 (527)
T PRK12664 278 VINRT--RKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASV 354 (527)
T ss_pred HHHHc--CCcCHHHHcChhh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 77665 7788999999999 99999999999999999999999999999999888765442 12 333444444444
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
+.|+.
T Consensus 355 ~~k~~ 359 (527)
T PRK12664 355 GLKFF 359 (527)
T ss_pred HHHHH
Confidence 46654
|
|
| >PRK07234 putative monovalent cation/H+ antiporter subunit D; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=366.34 Aligned_cols=274 Identities=22% Similarity=0.350 Sum_probs=227.9
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhhc
Q psy5224 593 MIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLN 672 (1178)
Q Consensus 593 ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~ 672 (1178)
.....|+|++.+|++||+++++++.++.. ++++++.++++||+++|.+|+.++++|+.++|..+|+++++++.+.
T Consensus 108 ~~~~~s~dl~~~~v~~El~~i~~~~Li~~-~~~~~~~~aa~kY~i~~~~gs~~lL~gi~~ly~~~gs~~~~~l~~~---- 182 (470)
T PRK07234 108 NAAFVCADLISLYVALEVLSIATFLLVAY-PRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATA---- 182 (470)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHhh----
Confidence 33455899999999999999999999975 4455688999999999999999999999999999999999876431
Q ss_pred cCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHHH
Q psy5224 673 NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLIL 752 (1178)
Q Consensus 673 ~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 752 (1178)
+ .....++++|+++|+|++|||.|+||+|+++|++++++++++.++.+.+.+.|+.... + .....+..+
T Consensus 183 --~----~~~~~l~~~g~~~K~glfPfH~WlP~a~~~a~~~~s~lls~~~~K~g~y~l~R~~~~~-~----~~~~~l~~l 251 (470)
T PRK07234 183 --D----PEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV-P----GLDLIVRIF 251 (470)
T ss_pred --h----HHHHHHHHHHHHHHHhhcchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHh-h----hHHHHHHHH
Confidence 1 1345678889999999999999999999999999999999975444555566764322 1 124577889
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5224 753 AIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNN 832 (1178)
Q Consensus 753 ~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~~ 832 (1178)
|++|+++|++.|++|+|+||++||||++|+||++++- ..++++++ +|.+.+..+|...+.++++
T Consensus 252 g~~t~~~g~~~al~q~dlKrlLAySSIsq~G~il~~~---------------~~~~~~~l-~H~l~k~~LFl~~g~i~~~ 315 (470)
T PRK07234 252 GVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAP---------------LVGGLYAL-AHGLVKSTLFLCAGALPSR 315 (470)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999872 13456676 9999999999999988776
Q ss_pred cCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 833 ~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
+ +++++++++|+.+++|.. ++.++++|+||+.||++|++++++..+ +...++++++++++. |.|++
T Consensus 316 ~--~~~~~~~~~gl~~~~pl~-----~~~lsl~GlPp~~GF~sK~lil~~~~~----~~~~~~~l~s~lt~~y~~ri~ 382 (470)
T PRK07234 316 N--FTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNLLP----WQAIALNLAAVGTAASFWKFI 382 (470)
T ss_pred c--CceeHHHhcCHHHHHHHH-----HHHHHHHhhhhhchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 5 667777888988888853 567899999999999999999998875 345566778888888 78887
|
|
| >MTH00207 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=367.16 Aligned_cols=295 Identities=21% Similarity=0.299 Sum_probs=239.4
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
-++...+.++|++.+|++||..++++|.++..+ +++++.+|++||+++|.+|+.++++|+.+.+. .|++++.+..+
T Consensus 99 ~~m~~lv~s~nl~~l~l~wE~~~l~sy~Li~~~-~~~~s~~A~~ky~l~~~iGs~~lL~gi~~~~~-~~~~~~~~~~~-- 174 (572)
T MTH00207 99 LSMNMLIFFPHLMILLLGWDGLGLVSFILVIYY-QNPKSLGAGMITALTNRIGDVMLLLSIGWTLN-QGHWSITNMWQ-- 174 (572)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcchhHHHHHH--
Confidence 356667889999999999999999999999764 46679999999999999999999999987753 46666543321
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~l-ls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
... .....+++++|+..|.|++|||.|+||+|+ +|++++++ +++.+|+++.+++.|+.. ... .......+
T Consensus 175 --~~~----~~~~~lll~i~~~~Ksa~fPfH~WLPda~~-aPtpvSall~s~tlv~aGvylliR~~~-~~~-~~~~~~~~ 245 (572)
T MTH00207 175 --TDM----NNYIALSIMIAAMTKSAQMPFSSWLPAAMA-APTPVSALVHSSTLVTAGVFLLIRFYP-FLS-STYWFNPA 245 (572)
T ss_pred --hhh----HHHHHHHHHHHHHHHhccccCccccchhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhHHHHHH
Confidence 000 112334467899999999999999999985 66666665 578799999999988742 211 11223467
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|++|+|+||++||||++|+||+++++.... ...+++|++.|++.+..+|+..+.
T Consensus 246 l~~lg~lT~l~g~l~Al~q~dlKrilAySSisqlG~m~~~l~~g~-----------~~~al~hll~Ha~~KalLFl~aG~ 314 (572)
T MTH00207 246 LLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGM-----------PKLALFHLITHALFKALLFVCAGS 314 (572)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHcc-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999886532 247899999999999999999887
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhh-chHHHHHHHHHHHHHHHh-hh
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFET-QKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~-~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
+.+.+ ++++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.... ..++...+.++++++++. |.
T Consensus 315 ii~~~-~~~~di~~~ggl~~~~P~~~~~~~i~~lsL~GiPp~sGF~sK~~Il~~~~~~~~~~~~~~i~ll~s~lt~~Y~l 393 (572)
T MTH00207 315 LIHSH-HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYST 393 (572)
T ss_pred HHHHh-CCCccHHHhcChHhhhHHHHHHHHHHHHHHHhCcchhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 64432 2667899999999999999999999999999999999999999999998743 445566677888889888 78
Q ss_pred hhc
Q psy5224 907 RII 909 (1178)
Q Consensus 907 r~~ 909 (1178)
|+.
T Consensus 394 Rl~ 396 (572)
T MTH00207 394 RFT 396 (572)
T ss_pred HHH
Confidence 886
|
|
| >MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=360.04 Aligned_cols=289 Identities=17% Similarity=0.260 Sum_probs=233.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccchhhHHHH
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISI-LYGITGTLELQSIFNV 668 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~l-l~~~~gs~~~~~~~~~ 668 (1178)
.++..+..|+|++.+|++||..++++|.++..++++ ++.+++.||++++.+|+.+++.++.. .+...++++++..
T Consensus 87 ~sm~~lv~s~nl~~l~v~wE~~~l~sy~LI~~~~~~-~s~~aa~k~~l~~~vGd~~lL~~~~~~~~~~~~~~~~~~~--- 162 (527)
T MTH00095 87 GSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNW-DSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFF--- 162 (527)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH---
Confidence 356677889999999999999999999999876554 58899999999999999999986432 2333344332211
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL-STTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~ll-s~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
......++++|...|.|++|||.|+||+|+ +|+++++++ ++.+++++.+++.|+.....+ ..+..
T Consensus 163 ----------~~~~~~llll~~~~Ksa~~PFH~WLPdA~~-aPTpVSALlhs~tlv~aGvyll~R~~~~~~~---~~~~~ 228 (527)
T MTH00095 163 ----------SSSMILMLLLTSFTKSAQFPFSSWLPKAMS-APTPVSSLVHSSTLVTAGLILLMNFSYLILN---MNVMK 228 (527)
T ss_pred ----------HHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHH
Confidence 112345667788899999999999999995 777777755 777888899998897643221 23556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++.++|++|+++|++.|++|+|+||++||||++|+||+++++..+. ...+++|++.|++.+..+|...+
T Consensus 229 ll~~lg~lT~l~g~l~Al~Q~DlKrlLAYSTIsqlG~m~l~l~~g~-----------~~~al~hli~Hal~Ka~LFl~aG 297 (527)
T MTH00095 229 IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGL-----------SFVSFIHLLSHALFKSCLFMQVG 297 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999999886421 23689999999999999999998
Q ss_pred HHhhccCCCCchhhhhhhhcccChH-HHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhch-HHHHHHHHHHHHHHHh-
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPW-CALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-IWLLLLIIMCSLIGAK- 904 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~-~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~-~~l~~l~ll~s~~~~~- 904 (1178)
.+.+.+ ++++++++++|+. +.|. ....+.++.+|++|+||++||++|+.++++.++.+. +++..+.++++++++.
T Consensus 298 ~ii~~~-~~~~di~~~~gl~-~~p~~~~~~~~i~~lsL~GiPp~sGF~SK~~Il~~~~~~~~~~~l~~i~~~s~~lT~~Y 375 (527)
T MTH00095 298 YLIHSN-FGQQDGRNYSNNG-NLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGY 375 (527)
T ss_pred HHHHhh-CCCcCHHHHcChh-cchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 765432 2567788999998 5555 567888999999999999999999999999998764 5566677888888888
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
|.|++
T Consensus 376 ~~Rl~ 380 (527)
T MTH00095 376 SYRLW 380 (527)
T ss_pred HHHHH
Confidence 78987
|
|
| >MTH00011 ND2 NADH dehydrogenase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=343.70 Aligned_cols=274 Identities=28% Similarity=0.509 Sum_probs=224.9
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|+++|+++++++.++.. ++++++.|+++||+++|.+||.++++|+.+.|...+ .
T Consensus 19 ~~~~~~s~~~~~~wv~lEl~~i~~~~li~~-~~~~~~~~aa~kYfl~~~~gS~~lL~gi~~~~~~~~------~------ 85 (330)
T MTH00011 19 TLMALSSNNWLFLWMGMELNLLSFVPLMTS-SKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPS------L------ 85 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------H------
Confidence 345568899999999999999999999865 445568999999999999999999999877653211 0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.......+++.|+.+|+|++|||.|+||+|+++|+..+.++++.+|++|+.++.+. . . ......+..
T Consensus 86 ------~~~~~~~l~~~~l~~KlG~~PfH~Wlp~~~~~~~~~~~~lls~~~K~~p~~ll~~~-~---~---~~~~~~l~~ 152 (330)
T MTH00011 86 ------LKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFF-T---S---HNILPMMTS 152 (330)
T ss_pred ------HHHHHHHHHHHHHHHHHhcchHHhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH-H---h---hhhHHHHHH
Confidence 01123456788999999999999999999999999999999999999999877322 1 1 112356778
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
++++|+++|++.+++|+|+||++|||||+|+||++++... +...+.+|++.|.+.+..+|...+..+.
T Consensus 153 l~~ls~l~g~~~al~q~dlK~llAySSI~h~g~il~~~~~------------~~~~~~~~~~~y~~~~~~lf~~~~~~~~ 220 (330)
T MTH00011 153 MAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVF------------SPSMAILYFMTYIIITTPLMLLFAYLNA 220 (330)
T ss_pred HHHHHHHHHHHHHHhHHhHHHHHHHHhHHHHHHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876432 2356788999999999998887765543
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++ .++.++..+++|.....+.+..++++|+||+.||++|+.++.++.+.+.+.+.++++++|+++++ |.|++
T Consensus 221 ~~------~~~~~~~~~~~~~~~~~~~l~~lsl~GlPPf~gF~~K~~il~~~~~~~~~~~~~il~l~S~lsl~~ylri~ 293 (330)
T MTH00011 221 FS------TKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI 293 (330)
T ss_pred cc------HHHHhhHhhcCHHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22334566778999999999999999999999999999999999988777777778889999999 89986
|
|
| >MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=347.13 Aligned_cols=271 Identities=30% Similarity=0.540 Sum_probs=225.5
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|+++|+++++++.++..+ +++++.|+++||+++|.+||.++++|+...|..+|+. +
T Consensus 18 ~~~~~~s~~l~~~~v~~El~~l~~~~Li~~~-~~~~~~~~~~kY~l~~~~gs~~ll~~i~~~~~~~g~~--~-------- 86 (335)
T MTH00160 18 TLISISSNSWFGAWMGLEINLLSFIPLISNK-KNLMSSESSLKYFLIQALASIILLFSIILNMLNLMLF--N-------- 86 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--h--------
Confidence 3455688999999999999999999998654 4456899999999999999999999999988777753 0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.....++++|+.+|+|++|||.|+||+|+++|+..+.++++++|++|+..+.+.. ....+..
T Consensus 87 --------~~~~~l~~~gl~~K~g~fPfH~Wlp~~~~~~~~~~~~~ls~~~Kv~~~~~~~~~~----------~~~~l~~ 148 (335)
T MTH00160 87 --------NISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI----------NNNFIII 148 (335)
T ss_pred --------hHHHHHHHHHHHHHhCCChHhccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHH
Confidence 1233567889999999999999999999999999999999999999997765432 0346778
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
++++|+++|++.|++|+|+||++||||++|+||+++++.... .....|...|.+.....+. ..++
T Consensus 149 l~~ls~i~g~~~al~q~dlKrllAySSI~~~G~il~~l~~~~------------~~~~~~~~~y~~~~~~~~~---~~~~ 213 (335)
T MTH00160 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISE------------NLWLIYFLIYSIISLSIIL---LFNK 213 (335)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHHHhH------------HHHHHHHHHHHHHHHHHHH---HHHH
Confidence 899999999999999999999999999999999999885421 1234455566554444332 2222
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
.+++++++++|+.+++|..+..+.++.++++|+||+.||++|+.++.+..+.+.+++..+++++|+++++ |.|+.
T Consensus 214 ---~~~~~i~~l~gl~~~~p~~~~~~~i~~lsl~GlPp~~gF~~K~~il~~~~~~~~~~l~~~l~i~S~~s~~~ylri~ 289 (335)
T MTH00160 214 ---FNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS 289 (335)
T ss_pred ---hHHhHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2567788888999999999999999999999999999999999999999988777777788889999999 89986
|
|
| >MTH00063 ND5 NADH dehydrogenase subunit 5; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=345.93 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=222.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.++..+..|+|++.+|++||+.++++|.++..+++ +++.||+.||++.+.+|+..+++++.+.+. +|+.
T Consensus 87 ~gm~~lv~S~dl~~~~v~wEl~sl~sy~LI~~~~~-~~s~~Aa~kyli~s~~G~~~l~l~ig~~~~-~g~~--------- 155 (522)
T MTH00063 87 LVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCW-GGSG--------- 155 (522)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcH---------
Confidence 34566788999999999999999999999987654 578999999999999999977776655332 2210
Q ss_pred hhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPK-LSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 670 ~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k-~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
......+++++++.|.+++|||.|+||+| ++|+++++++.+.+| +++.+.+.|+.....+ ..+..+
T Consensus 156 ---------~~~~~~~l~l~~~~Ksa~fPfH~WLPda~-~APTpVSall~s~~~v~aGvy~l~R~~~~~~~---~~~~~~ 222 (522)
T MTH00063 156 ---------SFLCCLFFFLIVFTKSASFPFISWLLEAM-RAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGF---SWLSIF 222 (522)
T ss_pred ---------HHHHHHHHHHHHHHHHHhcccHhhhhhhc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHHH
Confidence 11223445568999999999999999997 699999988755544 5577777787643322 245678
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
+.++|++|+++|++.|+.|+|+||++||||++|+||+++++... ...++++|+++|++.|..+|...+.
T Consensus 223 l~vlg~lT~i~g~l~Al~Q~DlKRlLAYSSIsqiGyill~l~~g-----------~~~~al~~ll~Hal~K~~LF~~~G~ 291 (522)
T MTH00063 223 FSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYG-----------DVILSLFQLVSHGVSKCLLFMLVGD 291 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999988642 2357899999999999999999987
Q ss_pred HhhccCCCCchhhh--hhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHh-
Q psy5224 829 LKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIMCSLIGAK- 904 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~--~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~-~~~l~~l~ll~s~~~~~- 904 (1178)
+.++.. ++++.++ ..+...+.+ .+.+.+..++++|+||+.||++|+.++++..+.+ .+++.++.+++++++..
T Consensus 292 i~~~~~-~~~~~~~~~~~~~~g~~~--~~~~~i~~lsL~GiPp~~GF~sK~~i~~~~~~~~~~~~l~~i~~l~svlS~~Y 368 (522)
T MTH00063 292 VMSGSG-GSQSSNCVYSSILYGSWN--LFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLY 368 (522)
T ss_pred HHHHcC-CcchHHHHhhccccchHH--HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 765431 2222222 122232222 3456667899999999999999999999999987 78888888999999999
Q ss_pred hhhhc
Q psy5224 905 GGRII 909 (1178)
Q Consensus 905 ~~r~~ 909 (1178)
|.|++
T Consensus 369 ~~Rl~ 373 (522)
T MTH00063 369 SFRLC 373 (522)
T ss_pred HHHHH
Confidence 78887
|
|
| >MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=334.02 Aligned_cols=271 Identities=26% Similarity=0.478 Sum_probs=221.5
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......|+|++.+|+++|+++++.+.++.. ++++++.++++||+++|++||.++++|..+.+.. ..
T Consensus 11 ~~~~~~s~n~~~~wv~~El~~l~~~~li~~-~~~~~~~~~~~kYfii~~v~s~~lL~g~~l~~~~--------~~----- 76 (323)
T MTH00197 11 VLFSLSSSNWFLVWIGMELNLIGFIPLLSQ-NKSITENEGAMKYFLFQEFGSALLLMGGSLSFSN--------LY----- 76 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HH-----
Confidence 445568899999999999999999998865 4455678999999999999999999985544321 10
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.......+++.|+.+|+|++|||.|+||+|+++|+..+.++++++|++|++.+ ++.. .....+..
T Consensus 77 ------~~~~~~~l~~~gl~~Klg~~PfH~Wlp~~~~~~~~~~~~ll~~~~K~~~~~ll-~~~~--------~~~~~l~~ 141 (323)
T MTH00197 77 ------LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL-AFNS--------SSFMGLLI 141 (323)
T ss_pred ------HHHHHHHHHHHHHHHHhCCCcccccHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHH--------HhHHHHHH
Confidence 01134456788999999999999999999999999999999999999999876 3211 12456778
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.+++|+|+||++||||++|+||+++++... ......|...|.+.+..++.. ..
T Consensus 142 lgi~S~~~g~~~al~q~dlKrlLAySSI~~~G~~l~~~~~~------------~~~~~~~~~~y~l~~~~l~~i----~~ 205 (323)
T MTH00197 142 CSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYS------------PSIFMLYYLIYFVIMFMLFLF----LS 205 (323)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHH----HH
Confidence 99999999999999999999999999999999999987532 123455666777776666532 12
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhhc
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRII 909 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~~ 909 (1178)
++ +++++++++|+.+++|.....+.++.++++|+||+.||++|+.++++..+.+.+.+..+++++|+++.. |.|+.
T Consensus 206 ~~--~~~~l~~~~gl~~~~~~~~~~~~i~~lsl~GlPpf~gF~~K~~il~~~~~~~~~~l~~~~ll~S~ls~~~ylri~ 282 (323)
T MTH00197 206 KN--NLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLA 282 (323)
T ss_pred HH--hHhhHHHHhCccccchHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 567778888999999999999999999999999999999999999999988777777788889999988 89986
|
|
| >KOG4845|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=309.27 Aligned_cols=298 Identities=21% Similarity=0.316 Sum_probs=258.6
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
.+....+.|++.+|+++|...++.++++..|+.++|+..|+.+++.+..+||.++|+|+...-..+|+.|+.....
T Consensus 102 ~I~~F~~~dLlmFYiffE~~lIP~l~lI~~wG~q~erl~aa~yflfYTl~~SlplLi~il~~~~~~gs~~~~~~~l---- 177 (452)
T KOG4845|consen 102 LIITFSSSDLLMFYIFFELSLIPTLVLILGWGSQPERLNAAYYFLFYTLLGSLPLLIGILYINNYGGSLNFLLLNL---- 177 (452)
T ss_pred HHHHhhHHHHHHHHHHHHhhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHhccccchhhHHHHh----
Confidence 3455678899999999999999999999999999999999999999999999999999987766788888876532
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.+.+.....+..+....+|++|.+++|.|.|+||+|.+||+.++.++++++-+.+-+++.|+.. ..++.....++++..
T Consensus 178 t~~~~~~~~lm~i~~~~aF~VK~Pi~~lHlWLPkAHvEAp~sgsMlLAGilLKlG~yG~lR~~~-il~~~t~~~s~~~l~ 256 (452)
T KOG4845|consen 178 TSYPFVISILMYIALLLAFAVKMPIYPLHLWLPKAHVEAPTSGSMLLAGILLKLGTYGFLRINM-ILPSATLVHSPVWLV 256 (452)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCcchhheeecchhhccCcchHhHHHHHHHHHcCCccchhHHH-hhhhHhhhcchHHHH
Confidence 2233334455667788899999999999999999999999999999999955555555668765 556666666788899
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
++.+.+++++..+.+|+|+|++.||||++|||.++.|+.+.+. ++..++...+++|++....+|..++..++
T Consensus 257 is~igiI~~S~~c~rQ~DLK~lIAYSSVsHM~~v~igi~s~T~--------~g~~GsillMiaHGl~ss~LF~lag~~Yd 328 (452)
T KOG4845|consen 257 ISLIGIIYTSSTCLRQTDLKKLIAYSSVSHMGFVLIGILSITM--------WGLIGSILLMIAHGLTSSALFCLAGVSYD 328 (452)
T ss_pred HHHHHHHHHhhcCcccccHHHHHHHhhhHHHHHHHHHhhcccc--------cchhhHHHHHHHccchHhHHHHHhccchh
Confidence 9999999999999999999999999999999999999987655 57788899999999999999999999998
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHhh
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAKG 905 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~~ 905 (1178)
+. +.+.++.++|+...+|.....|.+..+++.+.||+.+|.+|+.++.+.+..+ +....+..++.++++.|
T Consensus 329 R~--~sr~m~~~~Gl~ssmp~m~~~f~~~slANla~Ppt~~flgEf~vl~~~~s~s-~~~~~l~~i~milta~Y 399 (452)
T KOG4845|consen 329 RS--GSRMMYFMGGLFSSMPIMGTWFFLLSLANLALPPTSSFLGEFSVLVGIFSWS-KIMFVLIAIGMILTAAY 399 (452)
T ss_pred hc--cceehhhhccHHHhcHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 88 8899999999999999999999999999999999999999999999999865 44555566677777774
|
|
| >KOG1528|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=305.71 Aligned_cols=257 Identities=20% Similarity=0.292 Sum_probs=206.2
Q ss_pred CccccHHHHHHHHHHHHHHHHhccccccceE--EEeccCcccccHHHHHHHHHHHHHHHhcCCCCe--EEeeccCC----
Q psy5224 917 SPGIYIVEAIKAARKSALIINRGSLELENLR--FEEKKYENFVFNINKASEKIITKILFNTYPSYA--FLIKKSNY---- 988 (1178)
Q Consensus 917 ~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~--~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~--iigEE~~~---- 988 (1178)
.++++++.|.+|++.|++...+.++++-..+ +..|+|++|||.+|..+|+++...|++.||+++ +++||+.+
T Consensus 2 syekEl~~A~~AV~lAsrL~~~Vq~~L~~~~~~v~~K~D~SPVTvaDyG~QAiVs~vL~~~f~~~p~slVaEEds~~Lr~ 81 (351)
T KOG1528|consen 2 SYEKELDAAKKAVRLASRLCVKVQKSLLSSKEKVWSKSDKSPVTVADYGSQAIVSLVLEREFPDDPLSLVAEEDSGFLRK 81 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeccCCCCCcchhhhhHHHHHHHHHHHHcCCCCcceEeeccchhhhh
Confidence 3678899999999999999999887765555 889999999999999999999999999999998 99999831
Q ss_pred -------------------------------------------cCCCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 989 -------------------------------------------LTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 989 -------------------------------------------~~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
.+++.+++.|++||||||+.|+|| .+|+|.+||.+|
T Consensus 82 n~~~~~l~~i~~lvnetl~s~~sy~~~~~ls~~dvl~aID~G~s~GG~kGrhWvLDPIDGTrGFlRG-eqYAV~LALiv~ 160 (351)
T KOG1528|consen 82 NGSEGLLSRITKLVNETLASDESYGDNSPLSSDDVLKAIDRGNSEGGPKGRHWVLDPIDGTRGFLRG-EQYAVGLALIVE 160 (351)
T ss_pred hhhHHHHHHHHHHHHHHhhhhhhccCCCCCCHHHHHHHHhcccccCCCCCceEEeccCCCccccccc-chhhhhhheeec
Confidence 123456789999999999999999 559999999999
Q ss_pred CeEEEEEEEecC----------------CCcEEEEecCCceEEc--------CeecccCCCCCCCCcEEEeccCCCCCCC
Q psy5224 1026 KQITHSVIYDPI----------------RNDLFTAIKGCGAYLN--------EKRIRVNKRNKINDALIGTDFSFKNNIN 1081 (1178)
Q Consensus 1026 g~pv~gvV~~P~----------------~~~~~~a~~g~ga~~n--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1081 (1178)
|++++||+.||. .|.+++|.+|.|+|.. ..+++++..++++++.+..+.....+..
T Consensus 161 GkvvLGvmgCPNlpl~s~~~~~~s~~es~Gclf~a~~G~G~y~qsL~~~s~p~~kv~Vs~v~~~~~a~f~Es~e~~~s~h 240 (351)
T KOG1528|consen 161 GKVVLGVMGCPNLPLASYAAKDKSSPESVGCLFFAVRGSGTYVQSLDNESLPVIKVHVSSVENPKDAKFCESVEKGHSIH 240 (351)
T ss_pred CeEEEEEecCCCCcchhhhhhccCCCCcceEEEEEEecCceEeeeccCCCCCceEEEEecccChhhceeecccccCCccc
Confidence 999999999994 3569999999999962 2357888888888888775532211111
Q ss_pred hHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC-----CCccchHHHHHHHHHcCCcccccCCCCCCCC--
Q psy5224 1082 SEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG-----LKPWNIAAGSLLIIESGGIISNFKGEKNYLY-- 1154 (1178)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~-----~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~-- 1154 (1178)
.....+.....-...-.+.+| ..|++.+|.|++|+|++.. .++||+|||..|++||||+|||..|+|+...
T Consensus 241 -~~~~~IankLgI~~~P~~i~S-qaKYaalarGdaeVyLrf~~k~y~EkIWDHAaG~iiV~EAGGvVtDa~G~pLDFs~G 318 (351)
T KOG1528|consen 241 -GFQSTIANKLGIKKLPTRIDS-QAKYAALARGDAEVYLRFPLKGYREKIWDHAAGSIIVHEAGGVVTDAAGKPLDFSKG 318 (351)
T ss_pred -hhhHHHHHhhCcccCCceech-hHHHHHHhcCCcceeEeecccccchhhhhcccccEEEEecCceeecCCCCcccccCC
Confidence 111222222211111123354 7899999999999999865 4579999999999999999999999996654
Q ss_pred -----CCcEEEeChHHHHHHHHHHhhh
Q psy5224 1155 -----TGDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1155 -----~~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
.++||++++++|+++++++++.
T Consensus 319 r~L~~~~GiIvs~~~L~~~il~av~~s 345 (351)
T KOG1528|consen 319 RYLAHKTGIIVSTKKLHPKILEAVRES 345 (351)
T ss_pred ceeecCCcEEEEchhhHHHHHHHHHHh
Confidence 3679999999999999999874
|
|
| >cd01636 FIG FIG, FBPase/IMPase/glpX-like domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=294.52 Aligned_cols=178 Identities=24% Similarity=0.398 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHhccccccceE-EEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC---CCCccE
Q psy5224 922 IVEAIKAARKSALIINRGSLELENLR-FEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN---FENENI 997 (1178)
Q Consensus 922 l~~a~~aa~~a~~~~~~~~~~~~~~~-~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~---~~~~~~ 997 (1178)
++.+.+++++|++.+++.+++.+..+ +++|+++|+||++|+++|+.|++.|++.+|++.++|||.+.... .+++++
T Consensus 1 ~~~a~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~d~vt~aD~~~e~~i~~~L~~~~P~~~i~~EE~~~~~~~~~~~~~~~ 80 (184)
T cd01636 1 LEELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIVGEESGVAEEVMGRRDEYT 80 (184)
T ss_pred ChHHHHHHHHHHHHHHHHhccccccceeeecCCCCcccHHHHHHHHHHHHHHHHHCCCCeEEecCcCCccccccCCCCeE
Confidence 46789999999999999886654455 56778899999999999999999999999999999999876433 256799
Q ss_pred EEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCC
Q psy5224 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK 1077 (1178)
Q Consensus 998 wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1178)
|+|||||||+||++|.|.||+++|+. . ..+..+.+..
T Consensus 81 WiiDPiDGT~nf~~g~p~~~vsial~----------------~---------------------------~~~~~~~~~~ 117 (184)
T cd01636 81 WVIDPIDGTKNFINGLPFVAVVIAVY----------------V---------------------------ILILAEPSHK 117 (184)
T ss_pred EEEecccChHHHHhCCCCEEEeHHHH----------------H---------------------------HHeeccCCcc
Confidence 99999999999999999999999998 0 0011111100
Q ss_pred CCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCC--CccchHHHHHHHHHcCCccccc
Q psy5224 1078 NNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL--KPWNIAAGSLLIIESGGIISNF 1146 (1178)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~--~~wD~aA~~~i~~eaGg~v~d~ 1146 (1178)
. ... +...+...+..++|+.||+++++|+||+|+.|+|++.+. ++||+|||.+|++||||.++|+
T Consensus 118 ~-~~~---~~~~~~~~~~~~~r~~Gs~~l~~~~vA~G~~D~~~~~~~~~~~wD~aag~~i~~eaGG~vtd~ 184 (184)
T cd01636 118 R-VDE---KKAELQLLAVYRIRIVGSAVAKMCLVALGLADIYYEPGGKRRAWDVAASAAIVREAGGIMTDW 184 (184)
T ss_pred c-ccH---HHHHHHhhhccceeecCHHHHHHHHHHcCCCcEEEECCCCCCcHhHhHHHHHHHHCCCeecCC
Confidence 0 011 233344456678999999999999999999999999987 8999999999999999999984
|
A superfamily of metal-dependent phosphatases with various substrates. Fructose-1,6-bisphospatase (both the major and the glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate to fructose-6-phosphate in gluconeogenesis. Inositol-monophosphatases and inositol polyphosphatases play vital roles in eukaryotic signalling, as they participate in metabolizing the messenger molecule Inositol-1,4,5-triphosphate. Many of these enzymes are inhibited by Li+. |
| >PRK08168 NADH dehydrogenase subunit L; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=311.83 Aligned_cols=245 Identities=20% Similarity=0.256 Sum_probs=198.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+...+..|+|++.+|++||.+++++|.++..+++++++.|++.||++++.+|+.++++|+.++|..+|++|++++.....
T Consensus 112 g~~~lv~S~dL~~l~v~wEl~sL~sy~Li~~~~~~~~a~~AA~Ky~i~~~vGs~~lL~gi~lLy~~tGtl~~~~l~~~~~ 191 (516)
T PRK08168 112 AVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLA 191 (516)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHHHHHh
Confidence 45566889999999999999999999999888777778999999999999999999999999999999999998764332
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHhHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKIL 749 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~~~~~~~~~~l 749 (1178)
.... .........++++|+++|.+++|||.|+||+|+ +|+++++++++ +.|.+++ .+.|+... .. ....+..++
T Consensus 192 ~~~~-~~~~~~a~~Llllg~~~KsA~fPfH~WLPda~e-APTPVSALLha~vvk~G~y-~LiRf~~l-l~-~~~~~~~ll 266 (516)
T PRK08168 192 AQGA-SPSLQAAALLLVLAVILKTAQLPVHGWLIQVME-APTPVSALLHAGVVNLGGF-VLIRFAPL-LE-QAPPARWLL 266 (516)
T ss_pred cccc-chHHHHHHHHHHHHHHHHHhhhhhHhhhhhhcc-CCcHHHHHHHHHHHHHHHH-HHHHHHHH-Hh-hhHHHHHHH
Confidence 2111 223445567788999999999999999999976 88999998864 4677776 55587522 21 123345678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829 (1178)
Q Consensus 750 ~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~ 829 (1178)
.++|.+|+++|++.++.|+|+||++|||||+|+|||++++.... ...+++|+++|.+.|..+|+..+.+
T Consensus 267 ~~lg~lT~l~G~l~AL~Q~dlKRlLAYSTIsQmG~mllglg~g~-----------~~~Allhli~Hal~Ka~LFL~aG~i 335 (516)
T PRK08168 267 VLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGL-----------YELALLHLVAHSLYKAHAFLSASEA 335 (516)
T ss_pred HHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999886432 3578999999999999999999999
Q ss_pred hhccCCCCchhhhhhhhcccChHH
Q psy5224 830 KNNTCNKTDELDIFIGLHQRNPWC 853 (1178)
Q Consensus 830 ~~~~~~~~~~~~~~~gl~~~~p~~ 853 (1178)
.++. +++++++..+...+.|+.
T Consensus 336 i~~~--~t~~l~~~~~~~~~~~~~ 357 (516)
T PRK08168 336 VRDT--RLRRLQGPQSAAGVVSLL 357 (516)
T ss_pred HHHh--CCCchhcccccccccHHH
Confidence 8877 666666555444344433
|
|
| >PRK08601 NADH dehydrogenase subunit 5; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=299.44 Aligned_cols=251 Identities=19% Similarity=0.149 Sum_probs=201.2
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhh
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKL 671 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~ 671 (1178)
......++|++.+|++||+.+++++.|+..+++++++.+++.|+..+..+|+.++++|+.++|..+|+++++........
T Consensus 116 ~~~~~~S~DL~l~~vfwEl~sl~sy~LI~~~~~~~~~~~A~~~~~~~~l~gs~~lLlgi~~LY~~tGs~~~~~~~~~~~l 195 (509)
T PRK08601 116 ASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENL 195 (509)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHhhhhh
Confidence 34456899999999999999999999998776655556677776666778889999999999999999998754322111
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHH
Q psy5224 672 NNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751 (1178)
Q Consensus 672 ~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 751 (1178)
.+.++........++++|+.+|+|++|||.|+||+| ++|+++++++++.+++.+.+++.|+. +..+. ..+..++.+
T Consensus 196 ~~~~~~~~~~i~lLll~g~~~KaalfPfH~WLPdA~-~APTpVSAlLsa~lvkaG~y~LiR~~-~l~~~--~~~~~ll~i 271 (509)
T PRK08601 196 AQLGTWEKTGINLLLILAVMIPAAQWPFQRWLIESA-VAPTPVSAIMHAGLVNAGGIMLTRFS-PLFHD--DIAQILLLI 271 (509)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhhccchhhccccc-CCCcHHHHHHHHHHHHHHHHHHHHHH-HhccH--HHHHHHHHH
Confidence 112221222345567789999999999999999998 69999999988888888888888874 32222 235668889
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5224 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKN 831 (1178)
Q Consensus 752 ~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~ 831 (1178)
+|++|+++|++.|+.|+|+||++|||||+|+||+++++... +..++++|+++|++.|..+|+..+.+.+
T Consensus 272 lg~lS~i~G~l~AL~Q~DlKRlLAYSSIsqmGymllgi~~g-----------~~~gal~hli~Hal~Ka~LFL~aG~I~~ 340 (509)
T PRK08601 272 FASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG-----------AYSAAIIHLILHGLFKATLFLQSGSAVP 340 (509)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998642 3468899999999999999999999988
Q ss_pred ccCCCCchhhhhhhhcccChHHHHHHHHHHH
Q psy5224 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMF 862 (1178)
Q Consensus 832 ~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~l 862 (1178)
+. + .++..|..+++|+...++.+++.
T Consensus 341 ~~--g---~~~~~~~~~~~~~~~~~~~l~~~ 366 (509)
T PRK08601 341 RF--N---IVKQANEKKSYLWIVVGRVLGLL 366 (509)
T ss_pred Hh--C---CcccchhhhcCcHHHHHHHHHHH
Confidence 76 3 33445778888998888888773
|
|
| >KOG4668|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=263.03 Aligned_cols=309 Identities=24% Similarity=0.359 Sum_probs=248.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q psy5224 266 LAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISN 345 (1178)
Q Consensus 266 ~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~ 345 (1178)
.++|+..+++...++.....|+|++.+|++||.+.+++|.++..+.++++.+|+.||++++..|+..++.++..++...+
T Consensus 3 ~~~f~~~~~~~~~~~~~~~~s~~l~~~~~~~e~~~l~s~~l~~~~~~~~s~~a~~k~~l~~~~~~~~ll~~~~~~~~~~~ 82 (355)
T KOG4668|consen 3 INEFIFYILIPTAGMLILVTSNNLITMFVGWEGVGLCSYLLLGFKKNPRSTEAAMKYFLTNRAGSFILLFGISGLYLSSG 82 (355)
T ss_pred chhhHHHHHHHHHhHhhhcchhHHHHHHHHHHHHHHHHHHHHHhhcChhhhHHHHHHHHhcccchHHHHHHHHHHHHhcc
Confidence 35678889999999999999999999999999999999999999667778899999999999999999999999887666
Q ss_pred hhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHH--HHHHHHHHHHHHHhhhch
Q psy5224 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI--MLKLGCYGLLRFSLPIFP 423 (1178)
Q Consensus 346 ~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~--~~k~g~~~l~r~~~~~~~ 423 (1178)
....+.. +..... . ....+..+...|.+++|||.|+||++++ |+|+++..... ....+.....|. ...-
T Consensus 83 -~~~~~~~-~~~~~~--~--~~~~~~~~~~~ks~q~~f~~w~p~~~~g-ptpv~~~~~s~~~~v~a~~~~~v~~--~~~~ 153 (355)
T KOG4668|consen 83 -LFGNEIG-NNEYSS--I--TLIILLIASGGKSAQAPFHFWLPDAMEG-PTPVSATLSSSKTLVIAGLALAVRS--IPLL 153 (355)
T ss_pred -cchhhhh-hcccch--H--HHHHHHHHHHhhhccCcccccChHHhcC-CCchhhhhccchhHHHHHHHHHHHh--cccc
Confidence 2222211 111111 2 2223334444899999999999999998 99999998764 333344444443 2222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG 503 (1178)
Q Consensus 424 ~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g 503 (1178)
..+..+..+....+.+++..+++.|+.|+|+||.+||||++|.|++...+..+.. ..+..+...|.+.++.+|...|
T Consensus 154 ~~~~~i~~~~~~~~~~s~~~~~~~a~~Q~~ikk~~A~Ss~~qlg~~~~~l~~~~~---~~~~~~~~t~~~~~allf~~~g 230 (355)
T KOG4668|consen 154 CSSPLIQQLKLILGILSMLFGALCALTQTDIKKILAFSSIGQLGYMMFSLKVGMS---NNAILHLATHALFKALLFMCYG 230 (355)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccCCceeEEEeeccccc---chhhhhhhHHHHHHHHHHhhhH
Confidence 2344566778889999999999999999999999999999999999888877655 3588999999999999999999
Q ss_pred HHHHhhc-ccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhH-H-HHHHHHHHHHHHHHHh
Q psy5224 504 FLYNQMK-TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-I-GVLTSTALIFSAAYSL 580 (1178)
Q Consensus 504 ~~~~~~~-~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~-~-~~~~~~~~~ls~~y~l 580 (1178)
.+.+... ..++.+++|+.+..|+++..+.++.++++|+||+.||.+|+.+++.+...+.. + ..+....+.+..+|+.
T Consensus 231 sIi~~~~~~~~i~~~~~l~~~~pl~~~sl~i~~lsl~Glpfl~gf~~k~~i~e~~~~~~~~~~~~~i~~~s~~l~~~y~~ 310 (355)
T KOG4668|consen 231 SIIHYLNLEQDIRLMSGLLNLPPLLKLSLFIGLLSLGGLPFLAGFYSKDYIIETAFQNNLYALAPTILLTSVLLTLYYSF 310 (355)
T ss_pred HHhhcccchhhHHHhccccccCcHHHHHHHHhhHhhcCccchhhhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8877655 55889999999999999999999999999999999999999999888777643 2 3455677778888888
Q ss_pred hhhhhh
Q psy5224 581 CLSKNI 586 (1178)
Q Consensus 581 ~~~~~~ 586 (1178)
|..+..
T Consensus 311 ~~~~~~ 316 (355)
T KOG4668|consen 311 RTGRMF 316 (355)
T ss_pred HHHHhc
Confidence 844433
|
|
| >MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=229.50 Aligned_cols=216 Identities=19% Similarity=0.388 Sum_probs=157.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccccchhhHHHHhhhccC
Q psy5224 596 ISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILG-ILSSGFMLYGISILYGITGTLELQSIFNVIKLNNI 674 (1178)
Q Consensus 596 ~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~-~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~~~ 674 (1178)
.....|...|+.+|+. ...+. + ..++.++..|||++| ++||.+++.+..
T Consensus 11 ~n~~~Ww~~~l~mel~---~~~l~--~--~~~s~~s~~~YFliQ~slgS~~lL~~~~----------------------- 60 (273)
T MTH00091 11 LNIFVWWSVFLLMTLL---FVFLN--K--GMGSYSSLFNYFVLQESLGLLFLLFSFG----------------------- 60 (273)
T ss_pred HhHHHHHHHHHHHHHH---HHHHH--H--hhhhHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 3445678888888887 22221 1 234789999999999 799999997741
Q ss_pred ChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHHHHHH
Q psy5224 675 NCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAI 754 (1178)
Q Consensus 675 ~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 754 (1178)
.+...++.+|+|++|||+|+|+++++.+|..+.++++.||.+|+.++.... ...+..+.+
T Consensus 61 ---------~l~~~~L~lKlG~aPFHfW~~~V~~~lsw~~~~illT~QKl~Pl~ll~~~~-----------~~~~~~l~i 120 (273)
T MTH00091 61 ---------YFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-----------SKNFFFLLL 120 (273)
T ss_pred ---------HHHHHHHHHHHcCChHHhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHH
Confidence 245678899999999999999999999999999999999999998773221 112334567
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy5224 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTC 834 (1178)
Q Consensus 755 ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~~~~~ 834 (1178)
.+++.|++.+++|+++||++||||++|+||++++..... .....+|+..|...... +......
T Consensus 121 ls~~~g~~~glnq~slrkll~~SSi~h~gWml~~~~~s~-----------~~~~~~y~~~y~~~~~~----~~~~~~~-- 183 (273)
T MTH00091 121 FGLLICFFQMFLLKSYKNLLILSSTESFNWLILSFFFSF-----------FNVFFLFFYYFLLMLFL----IPKFNNV-- 183 (273)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhH-----------HHHHHHHHHHHHHHHHH----HHHHHHH--
Confidence 899999999999999999999999999999998774311 13456677766543322 1111111
Q ss_pred CCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHH
Q psy5224 835 NKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLL 894 (1178)
Q Consensus 835 ~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l 894 (1178)
+..+. .+ . -..++++|+||+.||..||.+++...+.+......+
T Consensus 184 -~~~~~---~~-~-----------~~lLsL~GlPP~~gF~~Kw~il~~l~~~~~~~~l~l 227 (273)
T MTH00091 184 -NKLNF---VS-W-----------ETLLVFMNLPFSVTFFVKIFSLSEILKVLGFFLLFL 227 (273)
T ss_pred -hHHHH---HH-H-----------HHHHHHhCCCchhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 11111 00 0 026789999999999999999999998776555543
|
|
| >KOG3099|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=229.58 Aligned_cols=221 Identities=16% Similarity=0.240 Sum_probs=166.8
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCC--CCeEEeeccCC----------
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYP--SYAFLIKKSNY---------- 988 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p--~~~iigEE~~~---------- 988 (1178)
......+++|+++..++...++-+.-.++++-..|+.|.||+.+|+.|.+.+.++|| ++.|+|||+..
T Consensus 11 ~vAss~r~c~q~~~L~qlllqek~~~~~nksf~~D~kTlAD~l~Qe~Ikq~l~~kFPgl~~~IiGEE~n~ftn~lge~~t 90 (340)
T KOG3099|consen 11 KVASSARICQQAGGLFQLLLQEKDLGIVNKSFAKDLKTLADRLAQECIKQSLGKKFPGLKDNIIGEESNKFTNSLGETLT 90 (340)
T ss_pred HHhHHHHHHHHhhHHHHHHHhcccccccccccccChHHHHHHHHHHHHHHHHHhhCCCcccceecccCccccccccceee
Confidence 345567889999998887665533333334457899999999999999999999999 89999999610
Q ss_pred ---------------------------------------cC--------CCCCccEEEEeccCCchHHhcc-CCCeEEEE
Q psy5224 989 ---------------------------------------LT--------NFENENIWIIDPLDNITNFSHN-FPQYCISI 1020 (1178)
Q Consensus 989 ---------------------------------------~~--------~~~~~~~wvIDPIDGT~nf~~g-~p~~~i~i 1020 (1178)
++ -.+++...+|||||||.+|+.| ....++.|
T Consensus 91 ~rlc~teedta~ll~~vL~~~~va~e~la~~vh~dvl~~~~~~~~e~~~lp~e~lgIWvDPlDgT~ey~~G~l~~VTvLI 170 (340)
T KOG3099|consen 91 VRLCDTEEDTAVLLCLVLSGNEVAAEILAKEVHEDVLFLDEACPSELKNLPEEDLGIWVDPLDGTAEYITGGLDCVTVLI 170 (340)
T ss_pred eeecccchhHHHHHHHhcCCcchhHHHHHhhhHHHHhcCCccCchhhhcCChHHeEEEecCCcchHHHHhcCcceEEEEE
Confidence 00 0123456789999999999997 58899999
Q ss_pred EEEECCeEEEEEEEecCC-------CcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh
Q psy5224 1021 ALKQKKQITHSVIYDPIR-------NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT 1093 (1178)
Q Consensus 1021 al~~~g~pv~gvV~~P~~-------~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1178)
+++++|+|+.|||++|.. |+++|+..|.|+ ||-+.+.-+. .+.+.+++++.....++...++.+
T Consensus 171 Gi~~kg~av~GVI~QPf~~~~~~~~gr~~WGv~g~G~--~G~~~ht~~~----~~iv~~trs~~~~ss~d~l~A~l~--- 241 (340)
T KOG3099|consen 171 GIAYKGRAVGGVINQPFYEEPDVYLGRTIWGVEGLGV--NGFPAHTGNA----EAIVTTTRSHSNSSSQDALVAFLD--- 241 (340)
T ss_pred EEEecCcccceeeccccccCccchhcceeeeeeccCC--CCCcCccCCc----eeecccchHHHHHhHHHHHHHhcc---
Confidence 999999999999999984 579999999988 5555443222 334444444433333333333322
Q ss_pred hcCCccccchHHHhHHHHHccccCEEEe--cCCCccchHHHHHHHHHcCCcccccCCCCC
Q psy5224 1094 KCKNLRNIGTSSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEKN 1151 (1178)
Q Consensus 1094 ~~~~~r~~Gs~~~~~~~va~G~~d~~~~--~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~ 1151 (1178)
..++-..|++++|...+.+|++|+|+- +++++||.||+++|++++||.++|.+|+-.
T Consensus 242 -~d~v~~v~GAG~K~LkvveG~vdaYvfa~~g~~KWDTCApeaiL~A~GG~ltdi~g~~~ 300 (340)
T KOG3099|consen 242 -GDEVEKVGGAGFKVLKVVEGKVDAYVFASPGCKKWDTCAPEAILRALGGDLTDIAGSVL 300 (340)
T ss_pred -hhHHHHhcCccceeheeeccceeEEEEcCCCccccccccHHHHHHHccCCeecchhhhh
Confidence 334444566899999999999999985 458999999999999999999999999853
|
|
| >KOG3853|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=223.28 Aligned_cols=252 Identities=15% Similarity=0.218 Sum_probs=184.8
Q ss_pred CCCccccHHHHHHHHHHHHHHHHhccccccceEEEecc-----CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc
Q psy5224 915 VGSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKK-----YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL 989 (1178)
Q Consensus 915 ~~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-----~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~ 989 (1178)
....++++..++.|+++.|.++++..++ ..++...|+ ..|+.|++|..++..+.+.|++.||+..|.+||.-+.
T Consensus 46 ~VdLr~ml~~avlAa~rGG~eV~~V~es-~~L~e~sKGkTdEG~ed~~T~aD~~Sn~~m~~~LqraFP~vQI~sEE~ke~ 124 (350)
T KOG3853|consen 46 DVDLRDMLSYAVLAAERGGHEVMKVNES-KNLNEASKGKTDEGKEDLLTRADLISNHLMLDILQRAFPQVQIVSEEKKEF 124 (350)
T ss_pred cccHHHHHHHHHHHHHhccHHHhhhhhh-hhhhhhhcCCcccccccccccchhhhhHHHHHHHHhhCCceEecchhhhhH
Confidence 4446789999999999999999887654 334333332 3599999999999999999999999999999997310
Q ss_pred --------------------------CCCCCccEEEEeccCCchHHhccCCCe-EEEEEEEECCeEEEEEEEecCCCcEE
Q psy5224 990 --------------------------TNFENENIWIIDPLDNITNFSHNFPQY-CISIALKQKKQITHSVIYDPIRNDLF 1042 (1178)
Q Consensus 990 --------------------------~~~~~~~~wvIDPIDGT~nf~~g~p~~-~i~ial~~~g~pv~gvV~~P~~~~~~ 1042 (1178)
.-..++.+++|||+|-|.+|..|..+| ++++|+..+|+|.+||||.|+.+++=
T Consensus 125 ~~qe~~l~~y~v~~~vl~e~~~ip~v~~~a~dVtVwvDPLDATqEfTE~L~eYVTtMvCvav~g~Pi~GvIh~PF~~~Ta 204 (350)
T KOG3853|consen 125 SEQEIELDNYAVWQSVLEELDKIPSVRLQASDVTVWVDPLDATQEFTEGLTEYVTTMVCVAVDGEPIFGVIHRPFFNETA 204 (350)
T ss_pred hhhhhhhccccCCHHHHHHhccCCcccccceeeEEEeccchhHHHHHHHHHHhhheEEEEEecCceeEEEeeccccccch
Confidence 011235577899999999999998554 79999999999999999999999988
Q ss_pred EEecCCceE---EcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHH-HHHhhcCCccccchHHHhHHHHHccccCE
Q psy5224 1043 TAIKGCGAY---LNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIGTSSLNLAYVASGKLDG 1118 (1178)
Q Consensus 1043 ~a~~g~ga~---~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~Gs~~~~~~~va~G~~d~ 1118 (1178)
||.-+.+-. -|=+|-+ ++ .....++..+.++... .+... +...+.-.+-.-|+++|+...+..|.+|+
T Consensus 205 wa~v~~s~~~~~SN~~p~~-s~--Neq~PiivVSRSH~g~-----vK~ia~~vfG~~~~i~pAgGaGYKvL~lv~~~A~l 276 (350)
T KOG3853|consen 205 WANVTISLEKSFSNFRPKN-SE--NEQNPIIVVSRSHAGK-----VKEIAEKVFGDKMNIEPAGGAGYKVLRLVNGTAEL 276 (350)
T ss_pred hhhcccchhhhhhcCCccC-Cc--ccCCCEEEEeccccch-----HHHHHHHHhcCcceeeecCCCceeeeEeecCcceE
Confidence 876655421 1222222 22 2223345555443322 22332 23344445666677899999999999999
Q ss_pred EEecC-CCccchHHHHHHHHHcCCcccccCCCCCCCCCCc------EEEeChHHHHHHHHHHhh
Q psy5224 1119 FFEKG-LKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD------IVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1119 ~~~~~-~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~------iva~~~~l~~~l~~~l~~ 1175 (1178)
|++.. .+.||+|||.+|+++.||..+|++|+|.++.+.. ..|.=+.-|+++..-+.|
T Consensus 277 YlHtt~IKKWDiCAGdAIL~alGG~MttL~gq~i~y~p~~~~n~~glla~i~~~h~~~~~Klpk 340 (350)
T KOG3853|consen 277 YLHTTAIKKWDICAGDAILRALGGAMTTLEGQPIRYSPQKINNFTGLLAEIKNSHEKITLKLPK 340 (350)
T ss_pred EEEehhhhhccccchHHHHHHcccceeccCCcccccCcccCCchhhHHHHHHhHHHHHHHhCch
Confidence 99866 8999999999999999999999999998876643 345444456666554443
|
|
| >KOG4668|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=227.33 Aligned_cols=297 Identities=29% Similarity=0.420 Sum_probs=228.1
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHH
Q psy5224 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNV 668 (1178)
Q Consensus 589 g~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~ 668 (1178)
-.++..+..|+|++..|++||.+.++++.++.. +.+.++.+|+.||++.+..|+..++.++..+|...|....+...
T Consensus 14 ~~~~~~~~~s~~l~~~~~~~e~~~l~s~~l~~~-~~~~~s~~a~~k~~l~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-- 90 (355)
T KOG4668|consen 14 TAGMLILVTSNNLITMFVGWEGVGLCSYLLLGF-KKNPRSTEAAMKYFLTNRAGSFILLFGISGLYLSSGLFGNEIGN-- 90 (355)
T ss_pred HHhHhhhcchhHHHHHHHHHHHHHHHHHHHHHh-hcChhhhHHHHHHHHhcccchHHHHHHHHHHHHhcccchhhhhh--
Confidence 345677788999999999999999999999987 88889999999999999999999999999999888832222111
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
.... ...........| .|.+.+|||.|+||++++ |.++.......++.+......+....-.......++..
T Consensus 91 ---~~~~--~~~~~~~~~~~~--~ks~q~~f~~w~p~~~~g-ptpv~~~~~s~~~~v~a~~~~~v~~~~~~~~~~~i~~~ 162 (355)
T KOG4668|consen 91 ---NEYS--SITLIILLIASG--GKSAQAPFHFWLPDAMEG-PTPVSATLSSSKTLVIAGLALAVRSIPLLCSSPLIQQL 162 (355)
T ss_pred ---cccc--hHHHHHHHHHHH--hhhccCcccccChHHhcC-CCchhhhhccchhHHHHHHHHHHHhccccccchHHHHH
Confidence 1111 122233334444 999999999999999999 88888888877565554444332222222223345678
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~ 828 (1178)
....+..+...++..+..|+|+||.+||||++|.||+...+.... ...+..+...|.+.+..+|...+.
T Consensus 163 ~~~~~~~s~~~~~~~a~~Q~~ikk~~A~Ss~~qlg~~~~~l~~~~-----------~~~~~~~~~t~~~~~allf~~~gs 231 (355)
T KOG4668|consen 163 KLILGILSMLFGALCALTQTDIKKILAFSSIGQLGYMMFSLKVGM-----------SNNAILHLATHALFKALLFMCYGS 231 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhhccCCceeEEEeecccc-----------cchhhhhhhHHHHHHHHHHhhhHH
Confidence 888999999999999999999999999999999999987664322 234567788888888888887776
Q ss_pred HhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHH-HHHHHHHHHHhh-h
Q psy5224 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL-LIIMCSLIGAKG-G 906 (1178)
Q Consensus 829 ~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~-l~ll~s~~~~~~-~ 906 (1178)
+-++.. ...++...+++.+..|.....+.++.++++|+||+.||++|+.+++.....+.+.+.. +.........+| .
T Consensus 232 Ii~~~~-~~~~i~~~~~l~~~~pl~~~sl~i~~lsl~Glpfl~gf~~k~~i~e~~~~~~~~~~~~~i~~~s~~l~~~y~~ 310 (355)
T KOG4668|consen 232 IIHYLN-LEQDIRLMSGLLNLPPLLKLSLFIGLLSLGGLPFLAGFYSKDYIIETAFQNNLYALAPTILLTSVLLTLYYSF 310 (355)
T ss_pred Hhhccc-chhhHHHhccccccCcHHHHHHHHhhHhhcCccchhhhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 665543 3337788889999999999999999999999999999999999999999988884444 455555555554 4
Q ss_pred hh
Q psy5224 907 RI 908 (1178)
Q Consensus 907 r~ 908 (1178)
|.
T Consensus 311 ~~ 312 (355)
T KOG4668|consen 311 RT 312 (355)
T ss_pred HH
Confidence 43
|
|
| >MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=203.34 Aligned_cols=219 Identities=17% Similarity=0.205 Sum_probs=152.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHH-HHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhhhhhH
Q psy5224 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYT-LMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIE 362 (1178)
Q Consensus 284 ~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~-~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 362 (1178)
+.+.|...-|-.|+.+.+....+ .. ..++.+++.||++.| +.||.+++.+..
T Consensus 8 ~~~~n~~~Ww~~~l~mel~~~~l-~~--~~~s~~s~~~YFliQ~slgS~~lL~~~~------------------------ 60 (273)
T MTH00091 8 FMSLNIFVWWSVFLLMTLLFVFL-NK--GMGSYSSLFNYFVLQESLGLLFLLFSFG------------------------ 60 (273)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHH-HH--hhhhHHHHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 44555555555555555443333 22 345779999999999 799998887641
Q ss_pred HHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHH
Q psy5224 363 QIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISII 442 (1178)
Q Consensus 363 ~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~ 442 (1178)
.+...+...|+|++|||+|+|+++++.++....++.+.+|.++...+.... ...+..+.+.+++
T Consensus 61 -----~l~~~~L~lKlG~aPFHfW~~~V~~~lsw~~~~illT~QKl~Pl~ll~~~~-----------~~~~~~l~ils~~ 124 (273)
T MTH00091 61 -----YFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-----------SKNFFFLLLFGLL 124 (273)
T ss_pred -----HHHHHHHHHHHcCChHHhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHH
Confidence 144568888999999999999999999999999999998888877664321 1122344578999
Q ss_pred HHHHHHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhh
Q psy5224 443 YISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522 (1178)
Q Consensus 443 ~g~~~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~ 522 (1178)
.|++.+++|+++||++||||++|+||++++...... ....+|...|...- ...- ..+..+ ..+..+ ..
T Consensus 125 ~g~~~glnq~slrkll~~SSi~h~gWml~~~~~s~~---~~~~~y~~~y~~~~----~~~~-~~~~~~---~~~~~~-~~ 192 (273)
T MTH00091 125 ICFFQMFLLKSYKNLLILSSTESFNWLILSFFFSFF---NVFFLFFYYFLLML----FLIP-KFNNVN---KLNFVS-WE 192 (273)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHH----HHHH-HHHHHh---HHHHHH-HH
Confidence 999999999999999999999999999998865430 23456666554322 2211 111111 111110 00
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHH
Q psy5224 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLT 568 (1178)
Q Consensus 523 ~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~ 568 (1178)
..++++|+||+.||..||.+++...+.+.....+.
T Consensus 193 -----------~lLsL~GlPP~~gF~~Kw~il~~l~~~~~~~~l~l 227 (273)
T MTH00091 193 -----------TLLVFMNLPFSVTFFVKIFSLSEILKVLGFFLLFL 227 (273)
T ss_pred -----------HHHHHhCCCchhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 26779999999999999999999888775444333
|
|
| >MTH00059 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-18 Score=182.77 Aligned_cols=255 Identities=18% Similarity=0.318 Sum_probs=175.9
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHH
Q psy5224 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSS---EAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNV 668 (1178)
Q Consensus 592 ~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~---~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~ 668 (1178)
..+...|+|++..|+++|+++++..+++.. ++++++. |+..||+++|++||.+++.|+....
T Consensus 19 ~ll~~sS~sw~~~W~~lEln~l~fIpll~~-~~~~~~~~~~es~~~YFiiQslsS~~ll~~~l~~~-------------- 83 (289)
T MTH00059 19 CLLCLVSDSLLGFWVFLELCGLSLIPCFFL-SSNSNVLNFYSSLLSYIVMSGLSSSLLVSGLLFSD-------------- 83 (289)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 456678999999999999999999988754 3343344 9999999999999999998865410
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHH
Q psy5224 669 IKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI 748 (1178)
Q Consensus 669 ~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~ 748 (1178)
...++..|+.+|+|++|||+|+|++.++.+|....++++.||..|+...... .. .....
T Consensus 84 -------------~~~li~~~L~lKlG~fPFHfW~~~V~~~lsW~~~~~l~T~QKi~pL~i~~~~--~~------~~~~l 142 (289)
T MTH00059 84 -------------LYFFIFFGFVVKFGLFPFMFWVYRVFSNSSWVVIWLISVVMKFPVLFFCFFL--QG------GGLSL 142 (289)
T ss_pred -------------HHHHHHHHHHHHHccchHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHH--Hh------cChHH
Confidence 0145677999999999999999999999999999999999999999875311 10 01134
Q ss_pred HHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 749 LLILAIFSLIIGNVSA-ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 749 l~~~~~ls~~~g~~~a-l~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
+...+.+|+++|+... +.|++.|++.++++++|+++++......+ ....++....|.+-..... -
T Consensus 143 ~~~~~~ls~lvg~~~~~~~s~s~~~~w~~~sisS~~~~~~~~~~~s-----------~~~~~~lf~yY~~~~~~~i---~ 208 (289)
T MTH00059 143 VFVDCFLTILFCGFLFWFYSLNWEYVWCHISLSSSATLVVACFCLS-----------IDLCFFLYLYYFFWSSGVI---I 208 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHh-----------HHHHHHHHHHHHHHHHHHH---H
Confidence 5566788888855554 55599999999999999999776554322 2333333344444333321 1
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hh
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GG 906 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~ 906 (1178)
...... +.++. ++. .... ..+-+..+|...+|+-|..........+.+.+..-. +-|..+.. ..
T Consensus 209 ~~~~~~--~~~~~---~~~------~~~~---~~~~~~~~P~S~~~fyKi~~~~~i~~~s~~~l~~w~-~ys~~eq~~l~ 273 (289)
T MTH00059 209 YFSSLS--DSNDL---KGY------YFFG---FCFLLLSTPVSFPLFYKLSVSIGIIYSSIYVLLVWV-IYSFSEQFYLF 273 (289)
T ss_pred HHHHcc--ccccc---ccc------chHH---HHHHHHhccchHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHHH
Confidence 111111 11111 111 0112 233455669999999999999999986655555543 36777777 46
Q ss_pred hhccc
Q psy5224 907 RIIKD 911 (1178)
Q Consensus 907 r~~~~ 911 (1178)
|...+
T Consensus 274 k~~~~ 278 (289)
T MTH00059 274 KLLVS 278 (289)
T ss_pred HHHhc
Confidence 66544
|
|
| >PRK09293 fructose-1,6-bisphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-17 Score=180.22 Aligned_cols=256 Identities=14% Similarity=0.148 Sum_probs=171.7
Q ss_pred ccccHHHHHHHHHHHHHHHHhccc-cccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC--CC-
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSL-ELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN--FE- 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~-~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~--~~- 993 (1178)
..++++...+++++.++.+++.-- .......+.+.++|++|++|+.+|+.+.+.|++.+|.+.+++||.++... .+
T Consensus 23 l~~ll~~Ia~Aak~I~~~i~~~~l~~~~g~~~~~N~~Gd~~~~lD~~ae~~i~~~L~~~~p~~~i~SEE~~~~~~~~~~~ 102 (327)
T PRK09293 23 LTALISAIALAAKIISRAINKGGLADILGAAGTENVQGETQKKLDVFANEILIEALKARGHVAGLASEEEDEIVPIPENE 102 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccccccCCCcHHHHHHHHHHHHHHHHHHHhCCCcEEEccCCCCccccCCCC
Confidence 344555555666666666655321 12233455678999999999999999999999999999999999876432 22
Q ss_pred CccEEEEeccCCchHHhccCCCeEEEEEEEECC--------------eEEEE--EEEecCCCcEEEEecCCceE-Ec---
Q psy5224 994 NENIWIIDPLDNITNFSHNFPQYCISIALKQKK--------------QITHS--VIYDPIRNDLFTAIKGCGAY-LN--- 1053 (1178)
Q Consensus 994 ~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g--------------~pv~g--vV~~P~~~~~~~a~~g~ga~-~n--- 1053 (1178)
.+++|++||||||+||..+.| .++..++++.. +.+++ ++|-|.+.-++...+|...| ++
T Consensus 103 g~y~wviDPLDGSsNfd~n~~-vGTIF~I~~~~~~~~~~~~~lq~G~~~vaAgy~~YG~~t~lv~t~g~gv~~ftld~~~ 181 (327)
T PRK09293 103 GKYLVAYDPLDGSSNIDVNVS-VGTIFSIYRAPVGTPTEEDFLQPGNNQVAAGYVLYGPSTMLVLTTGDGVHGFTLDPSL 181 (327)
T ss_pred CCEEEEEECccChhHhhcCCc-EEEEEEEEecCCCCcchHHhcCCchhheeEEEEEEcCceEEEEEeCCCEEEEEEeCCC
Confidence 568999999999999999998 88888887742 12555 78889988777764442222 22
Q ss_pred Cee-cccCCC-CCCCCcEEEeccCCCCCCChHHHHHHHHHHh-------hcCCccccchHHHhHHHHHccccCEEEecC-
Q psy5224 1054 EKR-IRVNKR-NKINDALIGTDFSFKNNINSEEYAKIFQIIT-------KCKNLRNIGTSSLNLAYVASGKLDGFFEKG- 1123 (1178)
Q Consensus 1054 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~- 1123 (1178)
|+- +...+- -+.+....+.+-+..+.++ +..+++.+... +..+.|..||.+-|+..+..-- .+|..+.
T Consensus 182 g~f~l~~~~i~ip~~~~~ys~n~~n~~~w~-~~~~~yi~~~~~~~~~~~~~y~~Ry~gsmVaD~hr~L~~G-Gif~YP~~ 259 (327)
T PRK09293 182 GEFVLTHENIRIPEDGKEYAINEGNQRHWE-PGVKKYIELLAGKDGPRGRPYNMRYIGSMVADVHRILLKG-GIFLYPAD 259 (327)
T ss_pred CeEEEecCCceeCCCCCEEccCchhhhhcC-HHHHHHHHHhccccccCCCCCCceeeeeehHHHhHHhhcC-eEEEcCCC
Confidence 211 111111 1222333443433333333 44555554332 3456799999999998877633 6666543
Q ss_pred -------CC-ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHHhhh
Q psy5224 1124 -------LK-PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1124 -------~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
++ -++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+++.+..+++
T Consensus 260 ~~~~~GkLRllyEa~P~afi~EqAGG~as~G~~~iLd~~p~~lHqr~p~~~GS~~eV~~~~~~~~~~ 326 (327)
T PRK09293 260 EPYPNGKLRLLYEANPMAFLVEQAGGAASDGKQRILDIEPESLHQRVPLFLGSKEEVERVEEYHAEA 326 (327)
T ss_pred CCCCCCcEEEEeecchHHHHHHHhCCccccCCccccccCCCccccCCCeEEeCHHHHHHHHHHhhcc
Confidence 11 3999999999999999999865432 22222 357789999999999988765
|
|
| >cd00354 FBPase Fructose-1,6-bisphosphatase, an enzyme that catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-16 Score=174.16 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=168.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhcccc-ccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC--C--
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLE-LENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN--F-- 992 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~-~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~--~-- 992 (1178)
...+++....++++.++.+++.-.. ..........++|.++++|+.+|+.+.+.|++..|.+.+.+||.++... .
T Consensus 14 l~~~i~~i~~a~k~Ia~~v~~a~l~~~~g~~~~~N~~GD~q~~lDv~ae~~~~~~L~~~~~~~~i~SEE~~~~~~~~~~~ 93 (315)
T cd00354 14 LTDLLSSLALACKEISRAVRRAGLAGLLGLAGSVNVQGDEQKKLDVLANDIFIEALKSSGVVAVLASEEEEEPVPVEESK 93 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCcEEEeCCCCCCcCcCCCC
Confidence 4456666666777777777664211 1222333446889999999999999999999999999999999876321 1
Q ss_pred CCccEEEEeccCCchHHhccCCCeEEEEEEEECCeEE---------------EE--EEEecCCCcEEEEecCCceEE-c-
Q psy5224 993 ENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQIT---------------HS--VIYDPIRNDLFTAIKGCGAYL-N- 1053 (1178)
Q Consensus 993 ~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv---------------~g--vV~~P~~~~~~~a~~g~ga~~-n- 1053 (1178)
..+++|++||||||+|+..+.| +++..++++...+. ++ ++|-|.+.-++.-.+|...|. +
T Consensus 94 ~g~y~vv~DPLDGSsNid~n~~-vGTIF~I~~~~~~~~~~~~~~lq~G~~~vAAgy~lYGp~T~lv~t~g~gv~~ftld~ 172 (315)
T cd00354 94 DGKYLVAFDPLDGSSNIDANVS-VGTIFSIYPGPSGADATEKDFLQPGRNQVAAGYALYGPSTMLVLTLGQGVHGFTLDP 172 (315)
T ss_pred CCCEEEEEECCcChhHhhcCCc-eEEEEEEEeCCCCcccchhhhcCcchhhheEEEEEEcCceEEEEEeCCceEEEEEcC
Confidence 3568999999999999999999 88889998764322 11 788898887776644433332 2
Q ss_pred --CeecccCC--CCCCCCcEEEeccCCCCCCChHHHHHHHHHHhh------cCCccccchHHHhHHHHHccccCEEEecC
Q psy5224 1054 --EKRIRVNK--RNKINDALIGTDFSFKNNINSEEYAKIFQIITK------CKNLRNIGTSSLNLAYVASGKLDGFFEKG 1123 (1178)
Q Consensus 1054 --~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~Gs~~~~~~~va~G~~d~~~~~~ 1123 (1178)
|+-+...+ +-+.+....+.+....+. .++..+++.+...+ ....|..||.+-|+..+.. +-..|..+.
T Consensus 173 ~~g~f~lt~~~~~ip~~~~~ys~n~~n~~~-w~~~~~~yi~~~~~~~~~~~~y~~Ry~gsmVaD~hr~L~-~GGif~yP~ 250 (315)
T cd00354 173 SLGEFILTHPNVKIPKKGKIYSINEGNYRY-WDEPVKKYIDDCKAGEDGGKPYNLRYIGSMVADVHRILV-RGGIFLYPA 250 (315)
T ss_pred CCCeEEEecCCceeCCCCCEECCCCcchhc-CCHHHHHHHHHHhccccCCCCccceeeeeeehHhHHhhh-cCeEEEccC
Confidence 12111111 122233344444222233 33444555543322 4568999999999998888 567777655
Q ss_pred CC---------ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHH
Q psy5224 1124 LK---------PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISL 1172 (1178)
Q Consensus 1124 ~~---------~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~ 1172 (1178)
-+ -++.++-..|+|.|||..+|-+.+- ...+. ..++.++++-.+++.+.
T Consensus 251 ~~~~~~gkLRllyEa~P~afi~EqAGG~as~G~~~iLdi~p~~~hqR~p~~~GS~~eV~~~~~~ 314 (315)
T cd00354 251 DKKSPKGKLRLLYEANPMAFLVEQAGGKATDGKERILDIVPTSLHQRVPVILGSKEEVERVEEY 314 (315)
T ss_pred CCCCCCCcEeeeeeccHHHHHHHHhCCeecCCCccccccCCCccccCCCeEEeCHHHHHHHHhh
Confidence 22 3999999999999999999866442 22222 34778888888777653
|
The alignment model also includes chloroplastic FBPases and sedoheptulose-1,7-biphosphatases that play a role in pentose phosphate pathway (Calvin cycle). |
| >MTH00059 ND2 NADH dehydrogenase subunit 2; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-14 Score=152.44 Aligned_cols=251 Identities=11% Similarity=0.121 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcch---HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhH
Q psy5224 275 ILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS---YAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351 (1178)
Q Consensus 275 ~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~---~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~ 351 (1178)
+...+....+.++|++.+|+++|+.++....++...++.+.. |+..||++.|.+||.+++.++... +
T Consensus 14 ~~~~~~ll~~sS~sw~~~W~~lEln~l~fIpll~~~~~~~~~~~~es~~~YFiiQslsS~~ll~~~l~~----~------ 83 (289)
T MTH00059 14 LSLFFCLLCLVSDSLLGFWVFLELCGLSLIPCFFLSSNSNVLNFYSSLLSYIVMSGLSSSLLVSGLLFS----D------ 83 (289)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH----h------
Confidence 444555667799999999999999999998888765555445 999999999999999998776531 0
Q ss_pred HhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Q psy5224 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431 (1178)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~ 431 (1178)
...++..|+..|.|++|||.|+|++.++.++....++++.+|..+++.. ... ... ...
T Consensus 84 --------------~~~li~~~L~lKlG~fPFHfW~~~V~~~lsW~~~~~l~T~QKi~pL~i~-~~~-~~~------~~~ 141 (289)
T MTH00059 84 --------------LYFFIFFGFVVKFGLFPFMFWVYRVFSNSSWVVIWLISVVMKFPVLFFC-FFL-QGG------GLS 141 (289)
T ss_pred --------------HHHHHHHHHHHHHccchHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH-HHH-Hhc------ChH
Confidence 0135567999999999999999999999999999999988777666653 211 111 123
Q ss_pred HHHHHHHHHHHHHHH-HHHhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5224 432 LIITLSLISIIYISL-IAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK 510 (1178)
Q Consensus 432 ~l~~~~~~s~~~g~~-~al~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~ 510 (1178)
.+...+++|+++|+. .-+.|++.|++.++++++|+++.+......+. ...++..+-|.+-.... + .+-..
T Consensus 142 l~~~~~~ls~lvg~~~~~~~s~s~~~~w~~~sisS~~~~~~~~~~~s~---~~~~~lf~yY~~~~~~~---i---~~~~~ 212 (289)
T MTH00059 142 LVFVDCFLTILFCGFLFWFYSLNWEYVWCHISLSSSATLVVACFCLSI---DLCFFLYLYYFFWSSGV---I---IYFSS 212 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHH---H---HHHHH
Confidence 455566778888554 45566999999999999999997766655433 22333333333222111 1 11111
Q ss_pred ccchhcccchhhhhHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy5224 511 TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575 (1178)
Q Consensus 511 ~~~l~~~~gl~~~~p~~~~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls 575 (1178)
..+.++.+|.. ..-. .+-+..+|...+|+-|..........+....+.=.+.++.-
T Consensus 213 ~~~~~~~~~~~------~~~~---~~~~~~~P~S~~~fyKi~~~~~i~~~s~~~l~~w~~ys~~e 268 (289)
T MTH00059 213 LSDSNDLKGYY------FFGF---CFLLLSTPVSFPLFYKLSVSIGIIYSSIYVLLVWVIYSFSE 268 (289)
T ss_pred ccccccccccc------hHHH---HHHHHhccchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 12223333321 1112 23345569999999999999888765543333333333333
|
|
| >PLN02262 fructose-1,6-bisphosphatase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=152.54 Aligned_cols=254 Identities=14% Similarity=0.141 Sum_probs=159.5
Q ss_pred ccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--CC--CC
Q psy5224 920 IYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--NF--EN 994 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~~--~~ 994 (1178)
.+++....++++.+..+++.- ............++|.+.+.|..+|+.+.+.|++..|.+.+.+||.++.. +. +.
T Consensus 35 ~l~~~i~~a~~~I~~~v~~~~l~~~~g~~~~~N~~Gd~qk~LDv~Ae~~~~~aL~~~~~v~~i~SEE~~~~~~~~~~~~g 114 (340)
T PLN02262 35 ILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFIKALVSSGRTNVLVSEEDEEAIFVEPSKRG 114 (340)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccccCCCCChhhHHHHHHHHHHHHHHhccCCccEEEeCCCCCcccccCCCCC
Confidence 344444444444444444421 11111222334578999999999999999999999999999999987532 11 24
Q ss_pred ccEEEEeccCCchHHhccCCCeEEEEEEEEC--------------Ce--EEEE-EEEecCCCcEEEEecCCceE-Ec---
Q psy5224 995 ENIWIIDPLDNITNFSHNFPQYCISIALKQK--------------KQ--ITHS-VIYDPIRNDLFTAIKGCGAY-LN--- 1053 (1178)
Q Consensus 995 ~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~--------------g~--pv~g-vV~~P~~~~~~~a~~g~ga~-~n--- 1053 (1178)
++.|++||||||+|+-.+.+ .++..++++. |+ ...| ++|-|.+.-++.-..|.-.| ++
T Consensus 115 ~y~v~fDPLDGSsNid~nvs-vGTIF~I~~~~~~~~~~~~~~lq~G~~qvAAGY~lYG~~T~lV~t~g~gv~~Ftld~~~ 193 (340)
T PLN02262 115 RYCVVFDPLDGSSNIDCGVS-IGTIFGIYMLKDGGEGTVEDVLQPGKEMVAAGYCMYGSSCTLVLSTGGGVNGFTLDPSL 193 (340)
T ss_pred CEEEEEeCCCCchhhhcccc-eeeEEEEEecCCCCCcchhhhcCchHhhhheeeeeecCceEEEEEeCCCeeEEEEcCCC
Confidence 58899999999999988877 7888888762 11 1222 66778777666654432222 22
Q ss_pred CeecccCC--CCCCCCcEEEeccCCCCCCChHHHHHHHHHHh------hcCCccccchHHHhHHHHHccccCEEEecC--
Q psy5224 1054 EKRIRVNK--RNKINDALIGTDFSFKNNINSEEYAKIFQIIT------KCKNLRNIGTSSLNLAYVASGKLDGFFEKG-- 1123 (1178)
Q Consensus 1054 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~-- 1123 (1178)
|+-+-..+ +-+.+....+.+.+..+. .++..+++.+... +....|..||.+-|+..+..- -.+|..+.
T Consensus 194 gef~lt~~~i~ip~~~~~ys~N~~n~~~-w~~~~~~yi~~~~~~~~~~~~~~~Ry~gsmVaD~hriL~~-GGif~YP~d~ 271 (340)
T PLN02262 194 GEFILTHPDIKIPKKGKIYSVNEGNAKN-WDGPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLY-GGIFLYPADK 271 (340)
T ss_pred CEEEEeCCCceeCCCCCEeccCccchhh-cCHHHHHHHHHHhhcccCCCCCCceeeeechHHHHHHHhc-CeEEeccCCC
Confidence 22211111 112233344443232333 3344555554432 335789999999999887663 25555433
Q ss_pred ------CC-ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHHhhh
Q psy5224 1124 ------LK-PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1124 ------~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
++ .++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+++.+..+++
T Consensus 272 ~~~~GkLRllyEa~P~afi~EqAGG~As~G~~~iLdi~p~~lHqR~pl~~GS~~eV~~~~~~~~~~ 337 (340)
T PLN02262 272 KSPNGKLRVLYEVFPMSFLVEQAGGQAFTGKQRALDLVPTKIHERSPIFLGSYDDVEEIKALYAAE 337 (340)
T ss_pred CCCCCcEEEEeecchHHHHHHHhCCccccCCccccccCCCccccCCCeEEeCHHHHHHHHHHHHHh
Confidence 11 4999999999999999999865432 22222 357789999899988877664
|
|
| >PRK12415 fructose 1,6-bisphosphatase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-12 Score=137.97 Aligned_cols=172 Identities=13% Similarity=0.164 Sum_probs=116.2
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEE-------------eeccCCcCCCCCccEEEEeccCCchHHhccCCCeEEEEEEE
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFL-------------IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALK 1023 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~ii-------------gEE~~~~~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~ 1023 (1178)
..+|.++-+.+++.|...- -+.-++ |||.+. ...++..|+|||||||+||++|.|.+++++|+.
T Consensus 30 ~~aD~aAv~AMR~~l~~~~~~G~VVIGEGe~DeAPML~iGEEvG~--g~~~~vdwaVDPIDGTtn~A~G~P~a~avIAla 107 (322)
T PRK12415 30 NEADDAATTAMRDMFDSVNMAGTVVIGEGELDEAPMLYIGEELGT--GNGPEVDIAVDPLEGTNIVAKGLANAMAVIAIA 107 (322)
T ss_pred HHHHHHHHHHHHHHhccCCcceEEEECCCCccCCceeEEEeecCC--CCCCCceEEEECccchhHHhCCCCCeEEEEEEE
Confidence 4689999999999997742 223333 445443 224678899999999999999999999999999
Q ss_pred ECCeEEEEEEEec--CCCcEEEEecCCceEEcCee-------cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh-
Q psy5224 1024 QKKQITHSVIYDP--IRNDLFTAIKGCGAYLNEKR-------IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT- 1093 (1178)
Q Consensus 1024 ~~g~pv~gvV~~P--~~~~~~~a~~g~ga~~n~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1093 (1178)
++| |++++| ..+++|++.+++|++--+.| +.....++.++-.+..- +++++++ +.+..+
T Consensus 108 ~~G----gll~~Pd~Ym~Kl~vgp~~~Gaidl~~~~~~Nl~~~A~a~~k~~~dltV~vL---dRpRH~~----lI~eir~ 176 (322)
T PRK12415 108 DKG----NLLHAPDMYMEKIAVGPKAAGKISLDDPIEKTIEIVAEANNKKIRDLTVIVQ---ERERHQD----IIDRVRA 176 (322)
T ss_pred eCC----CEeeCcHHhhccEEEccCCCceecCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHH----HHHHHHH
Confidence 999 999999 99999999999999853333 22234455555554443 2222222 233222
Q ss_pred hcCCccccch-HHHhHH--HHHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1094 KCKNLRNIGT-SSLNLA--YVASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1094 ~~~~~r~~Gs-~~~~~~--~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
...++|..+- +..... -+-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 177 ~Gari~Li~DGDV~~ai~~~~~~~~vD~~~GiGGaPEGVla-AaAlkclGG~~ 228 (322)
T PRK12415 177 KGARVKLFGDGDVGASIATALPGTGIDLFVGIGGAPEGVIS-AAALKCLGGEM 228 (322)
T ss_pred cCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHH-HHHHHhCCcee
Confidence 2344554321 222222 2445778999998888887776 44568888874
|
|
| >PLN02462 sedoheptulose-1,7-bisphosphatase | Back alignment and domain information |
|---|
Probab=99.36 E-value=4e-11 Score=132.02 Aligned_cols=257 Identities=15% Similarity=0.125 Sum_probs=160.8
Q ss_pred CCCCCCccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC
Q psy5224 912 CPGVGSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN 991 (1178)
Q Consensus 912 ~~~~~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~ 991 (1178)
+........+++...+++++.++.+++.. .........++|.+...|..+|+++.+.|++...-..+.+||.++...
T Consensus 9 ~~~~~~l~~li~~i~~a~k~Ia~~v~~a~---~g~~~~~N~~Gd~qk~LDv~A~~~~~~aL~~~~~v~~vaSEE~~~~v~ 85 (304)
T PLN02462 9 ATPDKKLRRLIMCMGEACRTIAFKVRTAS---CTGTACVNSFGDEQLAVDMLADKLLFEALKYSHVCKYACSEEVPEVQD 85 (304)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcC---CCccccccCCCchhhHHHHHHHHHHHHHHhcCCceEEEeccCCCCccc
Confidence 33344455666777777777777777643 223344456899999999999999999999876667888999876322
Q ss_pred --C--CCccEEEEeccCCchHHhccCCCeEEEEEEEEC-------Ce--EEEE-EEEecCCCcEEEEecCCceE---Ec-
Q psy5224 992 --F--ENENIWIIDPLDNITNFSHNFPQYCISIALKQK-------KQ--ITHS-VIYDPIRNDLFTAIKGCGAY---LN- 1053 (1178)
Q Consensus 992 --~--~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~-------g~--pv~g-vV~~P~~~~~~~a~~g~ga~---~n- 1053 (1178)
. +.++..++||+|||+|--.+.+ .++..+++++ |+ ...| ++|-|.+.-++.-.+|.|+. ++
T Consensus 86 ~~~~~~g~y~V~~DPLDGSSnid~N~s-vGTIF~I~~~~~~~~~~G~~qvAAgy~lYGp~t~lv~t~g~~~gv~~ftld~ 164 (304)
T PLN02462 86 MGGPVEGGFSVAFDPLDGSSIVDTNFA-VGTIFGVWPGDKLTGVTGRDQVAAAMGIYGPRTTYVVALKDGPGTHEFLLLD 164 (304)
T ss_pred cCCCCCCCEEEEECCCCCccccccCcc-cceeEEEEeCCcccCCCChhheeeeEEEEcCceEEEEEeCCCCCeeEEEECC
Confidence 1 3568999999999966554443 4455555543 22 2223 56778877777655533443 22
Q ss_pred -CeecccCCC-CCCCCcEEEeccCCCCCCChHHHHHHHHHH-hhcCCccccchHHHhHHHHHccccCEEEecC-------
Q psy5224 1054 -EKRIRVNKR-NKINDALIGTDFSFKNNINSEEYAKIFQII-TKCKNLRNIGTSSLNLAYVASGKLDGFFEKG------- 1123 (1178)
Q Consensus 1054 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~------- 1123 (1178)
|+-+...++ +-++....+. -+......++.++++.+.. .+..+.|..||.+-|..++..-.-..|..+.
T Consensus 165 ~g~f~lt~~~i~ip~~~~ys~-~n~r~~~w~~~~~~~i~~~~~~~y~~Ry~gsmVaD~hriL~~gGGif~yP~~~~~~Gk 243 (304)
T PLN02462 165 DGKWQHVKETTEIGEGKIFSP-GNLRATFDNPGYEKLINYYVSEKYTLRYTGGMVPDVYQIIVKEKGVFTNVTSPKSKAK 243 (304)
T ss_pred CCcEEEeCCCccCCCCCEeCC-CccccccCCHHHHHHHHHHhhCCCCceeeccchHHHHHhhhhCCeEEECCCCCCCCCc
Confidence 221111111 1111222222 1111113344555555433 4557889999999998777764445555432
Q ss_pred CC-ccchHHHHHHHHHcCCcccccCC--C-----CCCCCC-CcEEEeChHHHHHHHHHH
Q psy5224 1124 LK-PWNIAAGSLLIIESGGIISNFKG--E-----KNYLYT-GDIVAGNQKIFSQIISLI 1173 (1178)
Q Consensus 1124 ~~-~wD~aA~~~i~~eaGg~v~d~~G--~-----~~~~~~-~~iva~~~~l~~~l~~~l 1173 (1178)
++ -++.++-..|+|.|||..+|-.. + |...+. ..++.++++-.+++.+.+
T Consensus 244 LRllyEa~P~Afl~EqAGG~As~G~~g~~iLdi~p~~lHqR~p~~~GS~~eV~~~~~~~ 302 (304)
T PLN02462 244 LRLLFEVAPLGLLVEKAGGKSSDGVQGGSVLDKQINNLDQRTQVAYGSKNEVIRFEETL 302 (304)
T ss_pred EeeeehhhHHHHHHHhcCCeecCCCCCCccccCCCCccccCCCeEEcCHHHHHHHHHHh
Confidence 22 49999999999999999999765 2 222222 357789998888887765
|
|
| >PLN02628 fructose-1,6-bisphosphatase family protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.2e-11 Score=130.81 Aligned_cols=254 Identities=14% Similarity=0.081 Sum_probs=162.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhcccc-c----cceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLE-L----ENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT-- 990 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~-~----~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~-- 990 (1178)
...+++....++++.+..+++..-. . .........++|.+...|..+++++.+.|++...-..+.+||.++..
T Consensus 35 l~~ll~~i~~a~k~Ia~~v~~a~~~~~~~~~~g~~~~~N~~Gd~qkkLDviAn~~~~~aL~~~~~v~~laSEE~~~~v~~ 114 (351)
T PLN02628 35 LVVLMAHIQAACKRIAALLASPFNSELGKTSSGASGASGSGRDAPKPLDIVSNEIILSSLRNSGKVAVMASEEDDAPIWI 114 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccccccccccCCCCCchHHHHHHHHHHHHHHHhcCCCEEEEEEcCCCCCeec
Confidence 3345555555555555555553210 0 01223344678999999999999999999887667789999987632
Q ss_pred CCCCccEEEEeccCCchHHhccCCCeEEEEEEEECC--------------------eE-EE-E-EEEecCCCcEEEEecC
Q psy5224 991 NFENENIWIIDPLDNITNFSHNFPQYCISIALKQKK--------------------QI-TH-S-VIYDPIRNDLFTAIKG 1047 (1178)
Q Consensus 991 ~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g--------------------~p-v~-g-vV~~P~~~~~~~a~~g 1047 (1178)
+.+.+++.++||+|||+|.-.+.| .++..++++.. +- ++ | ++|-|.+.-++.-.+|
T Consensus 115 ~~~g~y~V~fDPLDGSSNid~N~s-vGTIF~I~~~~~~~~~~~~~~~~~~~~lq~G~~qvAAGY~lYGpsT~lV~t~g~g 193 (351)
T PLN02628 115 GDDGPYVVVFDPLDGSRNIDASIP-TGTIFGIYNRLVEADHLPVEEKAQLNVLQRGSRLVAAGYVLYSSATILCISFGSG 193 (351)
T ss_pred CCCCCEEEEEcCCCChhhhccCCc-eeeEEEEEeccCccccCccccccccccCCCccceeEEEEEEEccceEEEEEECCC
Confidence 234568999999999999999988 88899997731 11 22 2 5677777666654333
Q ss_pred Cce-EEc---CeecccCCC--CCCCCcEEEeccCCCCCCChHHHHHHHHHHh-------hcCCccccchHHHhHHHHHc-
Q psy5224 1048 CGA-YLN---EKRIRVNKR--NKINDALIGTDFSFKNNINSEEYAKIFQIIT-------KCKNLRNIGTSSLNLAYVAS- 1113 (1178)
Q Consensus 1048 ~ga-~~n---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~r~~Gs~~~~~~~va~- 1113 (1178)
.-. .++ |+-+...++ -+.+....+.+......+ ++..+++.+... +..+.|..||.+-|+..+..
T Consensus 194 v~~Ftld~~~geF~lt~~~i~ip~~g~iys~n~~n~~~W-~~~~~~yi~~~~~g~~~~~k~y~~Ry~GsmVaD~Hr~L~~ 272 (351)
T PLN02628 194 THGFTLDHSTGEFVLTHPDIKIPERGQIYSVNDARYFDW-PEGLRKYIDTVRQGKGQYPKKYSARYICSLVADLHRTILY 272 (351)
T ss_pred eeEEEEeCCCCEEEEeCCceeeCCCCCEeCCCCcccccC-CHHHHHHHHHHhcccCCCCCCccceeeeechHHHHHHhhc
Confidence 222 222 221111111 122233444443333333 344455554432 33568999999999988766
Q ss_pred cccCEEEecC--CC-ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHHhh
Q psy5224 1114 GKLDGFFEKG--LK-PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1114 G~~d~~~~~~--~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l~~ 1175 (1178)
| ..|..+. ++ -++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+++.+..++
T Consensus 273 G--Gif~YP~~KLRLlYEa~PmAfiiEqAGG~As~G~~~ILdi~p~~lHqR~p~~~GS~~eV~~~~~~~~~ 341 (351)
T PLN02628 273 G--GIAMNPRSHLRLVYEANPLSFLVEQAGGRGSDGKRRILSIQPVKLHQRLPLFLGSSEDVLELESYGDV 341 (351)
T ss_pred C--eEEECcccceeeeeecchHHHHHHhcCCcccCCCccccccCCCcccccCCeEEcCHHHHHHHHHHhch
Confidence 5 6666544 44 6999999999999999999865542 22222 35778999888888777655
|
|
| >PF00316 FBPase: Fructose-1-6-bisphosphatase; InterPro: IPR000146 This entry represents the fructose-1,6-bisphosphatase (FBPase) class 1 family | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.6e-11 Score=131.50 Aligned_cols=258 Identities=16% Similarity=0.160 Sum_probs=165.4
Q ss_pred CCCCCccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-
Q psy5224 913 PGVGSPGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT- 990 (1178)
Q Consensus 913 ~~~~~~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~- 990 (1178)
+.......+++....++++.+..+++.. .............||.+.+.|..+++++.++|++..+-..+.+||.++..
T Consensus 15 ~~~~~l~~ll~~i~~a~k~ia~~v~~a~l~~~~g~~~~~N~~Gd~q~~lDv~an~~~~~al~~~~~v~~~aSEE~~~~~~ 94 (324)
T PF00316_consen 15 PARGDLSQLLNAIALACKEIARLVRRAGLAGLLGYAGSVNVQGDDQKKLDVIANDIFIEALRSSGSVAALASEEEDEPVP 94 (324)
T ss_dssp TSTSHHHHHHHHHHHHHHHHHHHHTTTTHHHHTTTTEEESTTSTEEEHHHHHHHHHHHHHHHTTTTEEEEEETTSSSEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCchhhhHHHHHHHHHHHHhcCCCeEEEeecCCCcEEE
Confidence 3333445566666666666666666543 11122334456789999999999999999999998777888999987642
Q ss_pred ---CCCCccEEEEeccCCchHHhccCCCeEEEEEEEE---CC-----------e--EEEE-EEEecCCCcEEEEecCCce
Q psy5224 991 ---NFENENIWIIDPLDNITNFSHNFPQYCISIALKQ---KK-----------Q--ITHS-VIYDPIRNDLFTAIKGCGA 1050 (1178)
Q Consensus 991 ---~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~---~g-----------~--pv~g-vV~~P~~~~~~~a~~g~ga 1050 (1178)
....++..++||+||++|.--+.+ .++..++++ ++ + ...| ++|-|.+.-++.- |.|+
T Consensus 95 ~~~~~~g~y~V~fDPLDGSSnid~N~~-vGTIF~I~~~~~~~~~~~~~~lq~G~~~vAAGY~lYGpsT~lV~t~--g~gV 171 (324)
T PF00316_consen 95 LEENPNGKYIVAFDPLDGSSNIDVNVS-VGTIFGIYRRPSGGEPSELDFLQPGREQVAAGYVLYGPSTMLVLTT--GSGV 171 (324)
T ss_dssp ETGGCEEEEEEEEEEEETGGGGGGTSS-EEEEEEEEETSSSSSSCGHHHTSTGGGESEEEEEEESSSEEEEEEC--TTEE
T ss_pred ecCCCCceEEEEEecCCCccccccchh-hheeeeeeccccCCCcchhhhcCCChheeEEEEEEEcCceEEEEEE--CCcE
Confidence 234568999999999999999988 999999999 22 2 2223 5677876544443 3333
Q ss_pred E---E---cCeec--ccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh-------hcCCccccchHHHhHHHHHccc
Q psy5224 1051 Y---L---NEKRI--RVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT-------KCKNLRNIGTSSLNLAYVASGK 1115 (1178)
Q Consensus 1051 ~---~---n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~r~~Gs~~~~~~~va~G~ 1115 (1178)
. + .|+-+ +..-+-+.+....+.+-.... ..++..+++.+... +..+.|..||.+-|+.++..--
T Consensus 172 ~~FtLD~~~g~F~lt~~~i~iP~~g~~ys~n~~n~~-~w~~~~~~yi~~~~~g~~~~~~~y~~RY~GsmVaD~HRiL~~G 250 (324)
T PF00316_consen 172 HGFTLDPSTGEFVLTHPNIRIPEKGKIYSINESNAR-HWDPPYRAYIDYCKAGKEGPRKKYSLRYIGSMVADVHRILLKG 250 (324)
T ss_dssp EEEEEETTTTEEEEEEESE---SSSSEEES-GGGGG-GCTHHHHHHHHHHHS-TTSSTCT-EEEB-SSHHHHHHHHHHHT
T ss_pred eEEEEeCCCCEEEEecCceeecCCCcEeccCccccc-cCChHHHHHHHHHhcCCCCCCccccceecCccchhHHHHHhhC
Confidence 2 1 12111 111122233445555433333 33445555554433 3457899999999998877632
Q ss_pred cCEEEecCCC---------ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHHhh
Q psy5224 1116 LDGFFEKGLK---------PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1116 ~d~~~~~~~~---------~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l~~ 1175 (1178)
..|..+.-+ -++.++-..|+|+|||..+|-.++- ...+. ..++.++++-.+++.+..++
T Consensus 251 -Gif~YP~d~~~~~GKLRlLYEa~PmAflvEqAGG~As~G~~riLdi~p~~lHqR~pl~~GS~~eV~~~~~~~~~ 324 (324)
T PF00316_consen 251 -GIFLYPADKKYPNGKLRLLYEANPMAFLVEQAGGKASDGRERILDIVPESLHQRTPLFLGSAEEVEELESYYKE 324 (324)
T ss_dssp -CEEEE-SBSSBTTCSSBTTTTHHHHHHHHHHTTCEEESSSSBGGGS--SSTT-BE-EEEESHHHHHHHHHHHHH
T ss_pred -cEEECCCCCCCCCCceeEEEeccHHHHHHHHcCCEeccCCcccccCCCCcccCCCCeEEcCHHHHHHHHHHhhC
Confidence 666655411 4999999999999999999977542 22222 34778999999998887764
|
FBPase is a critical regulatory enzyme in gluconeogenesis that catalyses the removal of 1-phosphate from fructose 1,6-bis-phosphate to form fructose 6-phosphate [, ]. It is involved in many different metabolic pathways and found in most organisms. FBPase requires metal ions for catalysis (Mg2+ and Mn2+ being preferred) and the enzyme is potently inhibited by Li+. The fold of fructose-1,6-bisphosphatase was noted to be identical to that of inositol-1-phosphatase (IMPase) []. Inositol polyphosphate 1-phosphatase (IPPase), IMPase and FBPase share a sequence motif (Asp-Pro-Ile/Leu-Asp-Gly/Ser-Thr/Ser) which has been shown to bind metal ions and participate in catalysis. This motif is also found in the distantly-related fungal, bacterial and yeast IMPase homologues. It has been suggested that these proteins define an ancient structurally conserved family involved in diverse metabolic pathways, including inositol signalling, gluconeogenesis, sulphate assimilation and possibly quinone metabolism []. This entry also includes sedoheptulose-1,7-bisphosphatase, which is a member of the FBPase class 1 family.; GO: 0042578 phosphoric ester hydrolase activity, 0005975 carbohydrate metabolic process; PDB: 2GQ1_A 2QVR_A 2Q8M_B 2OX3_A 2OWZ_A 3KC0_C 2WBB_A 1FTA_C 2VT5_F 2Y5L_F .... |
| >COG0158 Fbp Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-10 Score=119.61 Aligned_cols=257 Identities=14% Similarity=0.125 Sum_probs=162.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccc-cceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--CC-C
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLEL-ENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--NF-E 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~-~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~~-~ 993 (1178)
.+.+++....++++.++.+++.-..- -...-.+..++|.+.+.|+.+++++.+.+++.-+-..+.+||.++.. +. .
T Consensus 22 l~~vl~~i~~a~k~i~~~i~~a~L~~~~G~~g~~N~qGd~QkKlDv~an~~~~~~l~a~~~Va~~aSEE~d~~v~~~~~~ 101 (326)
T COG0158 22 LSAVLSSIALAGKEIAREINKAGLAGVLGYSGAENVQGDTQKKLDVFANEILIEALKARGNVAGIASEEEDEPVTFPENN 101 (326)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccccccccccCcchhhhhHHHhhHHHHHHHHccchhheeecccccCceecCCCC
Confidence 33444444444444444444322110 01223344578999999999999999999998888999999987532 12 3
Q ss_pred CccEEEEeccCCchHHhccCCCeEEEEEEEECC---------------eEEEE-EEEecCCCcEEEEecCCceE-Ec---
Q psy5224 994 NENIWIIDPLDNITNFSHNFPQYCISIALKQKK---------------QITHS-VIYDPIRNDLFTAIKGCGAY-LN--- 1053 (1178)
Q Consensus 994 ~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g---------------~pv~g-vV~~P~~~~~~~a~~g~ga~-~n--- 1053 (1178)
..+.+..||+||++|--.+.+ .++..+++++. +..+| ++|-|.+.-+|.-..|.-.+ ++
T Consensus 102 g~Y~V~~DPLDGSSNiDvNvs-vGTIFsIy~~~~~~~t~~dflqpG~~qvAAGYv~YG~st~LV~t~g~gV~~ftld~~~ 180 (326)
T COG0158 102 GSYAVAYDPLDGSSNIDVNVS-VGTIFSIYRRPGSPGTEEDFLQPGNKQVAAGYVVYGPSTMLVYTLGEGVHGFTLDPSL 180 (326)
T ss_pred ceEEEEeCCCCCccccccCcc-eeEEEEEEecCCCCcchhhhcCcchhhhheEEEEEcCceEEEEEeCCceEEEEEcCCC
Confidence 568999999999999988877 88999998765 12333 67888887777655543222 22
Q ss_pred CeecccCC--CCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcC-------CccccchHHHhHHHHHc-cccCEEEecC
Q psy5224 1054 EKRIRVNK--RNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK-------NLRNIGTSSLNLAYVAS-GKLDGFFEKG 1123 (1178)
Q Consensus 1054 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~Gs~~~~~~~va~-G~~d~~~~~~ 1123 (1178)
|+-+...+ +-+.+....+.+-+... +.++..+++.+...+.. ..|..||..-|+-.+.. |-.-.|....
T Consensus 181 G~F~lt~~ni~iP~~~~iyain~gn~~-~w~~~v~~yI~~~~~~~~~~~r~y~~RyigSmVADvHRiL~~GGiF~YP~~~ 259 (326)
T COG0158 181 GEFILTHENIRIPEKGKIYAINEGNQR-HWEEGVKKYIKDCFAEDKGTRRPYNMRYIGSMVADVHRILLKGGIFLYPSDK 259 (326)
T ss_pred CEEEEeccccccCCCCceeeeCCcccc-cccHHHHHHHHHHhccCCCcCCCcchhhHHHHHHHHHHHHHcCceEeccccC
Confidence 33222211 12233344455433333 34455556555443322 37888999999877665 4444444222
Q ss_pred CC-------ccchHHHHHHHHHcCCcccccCCC-----CCCCCC-CcEEEeChHHHHHHHHHHhhh
Q psy5224 1124 LK-------PWNIAAGSLLIIESGGIISNFKGE-----KNYLYT-GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1124 ~~-------~wD~aA~~~i~~eaGg~v~d~~G~-----~~~~~~-~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
.+ -+...+-+.|+|.|||..+|-.-+ |..++. ..++-++++-.+++.+.++++
T Consensus 260 ~~P~GKLRllYEanPmAflvEqAGG~Atdg~~rILDi~P~~lHqR~p~~~GS~~eV~~~~~~~~~~ 325 (326)
T COG0158 260 RAPNGKLRLLYEANPMAFLVEQAGGKATDGKQRILDIVPEKLHQRVPLFLGSKEEVEKLERFIKEF 325 (326)
T ss_pred CCCCCceeeeeecchHHHHHHHhcCcccCCCccccccCchhhccccceEeccHHHHHHHHHHhhcC
Confidence 11 388999999999999999965433 222333 346678888888888888775
|
|
| >PLN02542 fructose-1,6-bisphosphatase | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.5e-10 Score=124.59 Aligned_cols=249 Identities=12% Similarity=0.099 Sum_probs=156.6
Q ss_pred ccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC----CCCC
Q psy5224 920 IYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT----NFEN 994 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~----~~~~ 994 (1178)
.+++....++++-+..+++.- ............++|.+...|..+++.+.+.|++..+-..+.+||.++.. ....
T Consensus 98 ~ll~~Ia~A~k~Ia~~v~~a~l~~~~g~ag~~N~~Gd~qkkLDviA~~~~~~aL~~~~~v~~~aSEE~e~~v~~~~~~~g 177 (412)
T PLN02542 98 IVLSSISMACKQIASLVQRAGISNLTGVQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSG 177 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccCcCCCCchhHHHHHHHHHHHHHHHhcCCCEEEEeecCCCCceecCCCCCC
Confidence 344444445555555555432 11122223345678999999999999999999988777899999987532 1235
Q ss_pred ccEEEEeccCCchHHhccCCCeEEEEEEEECC----------------------------e--EEEE-EEEecCCCcEEE
Q psy5224 995 ENIWIIDPLDNITNFSHNFPQYCISIALKQKK----------------------------Q--ITHS-VIYDPIRNDLFT 1043 (1178)
Q Consensus 995 ~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g----------------------------~--pv~g-vV~~P~~~~~~~ 1043 (1178)
++..++||+||++|--.+.+ .++..++++.. + ...| ++|-|.+.-++.
T Consensus 178 ~Y~V~fDPLDGSSNID~N~s-VGTIFsI~~~~~~~~~~~~~~~~~~~~~~~~~~~~lqpG~~qvAAGY~lYGpsT~LVlt 256 (412)
T PLN02542 178 NYIVVFDPLDGSSNIDAAVS-TGSIFGIYSPNDECLADIGDDSTLDSVEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLT 256 (412)
T ss_pred CEEEEEcCCCCccccccCCc-eeeEEEEEecCcccccccccccccccccccchhhccCcchhhhEEEEEEEccceEEEEE
Confidence 68999999999999998877 88889998621 1 1222 567777666555
Q ss_pred EecCCceE---Ec---CeecccCCC--CCCCCcEEEeccCCCCCCChHHHHHHHHHHh------hcCCccccchHHHhHH
Q psy5224 1044 AIKGCGAY---LN---EKRIRVNKR--NKINDALIGTDFSFKNNINSEEYAKIFQIIT------KCKNLRNIGTSSLNLA 1109 (1178)
Q Consensus 1044 a~~g~ga~---~n---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~r~~Gs~~~~~~ 1109 (1178)
- |.|+. ++ |+-+-..++ -+.+....+.+....+. .++..+++.+... +....|..||.+-|+.
T Consensus 257 ~--G~GV~~FtLDp~~geFvLt~~~i~IP~~g~iySiN~~N~~~-W~~~~~~yi~~~~~~~~~gk~ys~RYiGSmVaDvH 333 (412)
T PLN02542 257 I--GTGVFSFTLDPMYGEFVLTQENIQIPKAGKIYSFNEGNYQL-WDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFH 333 (412)
T ss_pred E--CCCEEEEEEcCCCCeEEEeCCCeeeCCCCcEeeeCcccccc-cCHHHHHHHHHHhhCCCCCCCCcceeeeechHHHH
Confidence 4 34432 22 222211111 12233344444333333 3445555555442 2356899999999998
Q ss_pred HHHccccCEEEecC--CC-------ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHH
Q psy5224 1110 YVASGKLDGFFEKG--LK-------PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLI 1173 (1178)
Q Consensus 1110 ~va~G~~d~~~~~~--~~-------~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l 1173 (1178)
.+..- -.+|..+. .+ -++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+++.+.+
T Consensus 334 RiLl~-GGIF~YP~d~~~~~GKLRLLYEa~PmAfivEqAGG~AsdG~~rILDi~P~~lHqR~Pl~~GS~~eV~~~~~~~ 411 (412)
T PLN02542 334 RTLLY-GGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIQPTEIHQRVPLYIGSVEEVEKLEKYL 411 (412)
T ss_pred HHhhc-CeEEecCCCCCCCCCcEeEeeecchHHHHHHHhCCcccCCCccccccCCCccccCCCeEEcCHHHHHHHHHhh
Confidence 77663 25565433 11 3999999999999999999865432 22222 347788888888876653
|
|
| >KOG1458|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.4e-07 Score=95.97 Aligned_cols=223 Identities=11% Similarity=0.115 Sum_probs=136.0
Q ss_pred EeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc----CCCCCccEEEEeccCCchHHhccCCCeEEEEEEEE
Q psy5224 949 EEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL----TNFENENIWIIDPLDNITNFSHNFPQYCISIALKQ 1024 (1178)
Q Consensus 949 ~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~----~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~ 1024 (1178)
.....+|.+...|.-++++..+.|+.-+-..-+++||.++. .+....++++.||+||++|--.+.+ .++..+++.
T Consensus 73 ~vN~~GdeqKkLDvlsn~l~in~L~sS~~~~vlvSEE~~~~i~v~~~~~G~Y~V~fDPLDGSSNID~~vs-vGTIFgIy~ 151 (343)
T KOG1458|consen 73 SVNSTGDEQKKLDVLSNDLFINALRSSGRTKVLVSEENEELIVVEGEKRGKYVVCFDPLDGSSNIDALVS-VGTIFGIYR 151 (343)
T ss_pred ccccCccchhhhhhhhHHHHHHHHHhcCceEEEEecCCCcceeccCCcccceEEEeCCCCCcccccccce-eeeEEEEEe
Confidence 34567899999999999999999999888888899998653 2223568999999999999888876 788888887
Q ss_pred ---CCeEEEEEEEecCCCc------------EEEEecCCce--EE----cCeecccCCCC--CCCCcEEEeccCCCCCCC
Q psy5224 1025 ---KKQITHSVIYDPIRND------------LFTAIKGCGA--YL----NEKRIRVNKRN--KINDALIGTDFSFKNNIN 1081 (1178)
Q Consensus 1025 ---~g~pv~gvV~~P~~~~------------~~~a~~g~ga--~~----n~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 1081 (1178)
+++|..--+-.|-.+. ++.-.-|.|+ |. -|+-+.+.+.. +....+.+.+-.....+
T Consensus 152 ~~~~~~~~~~d~lq~G~~~VAAgY~lYgsat~~vLt~g~Gv~~FtLD~~~GEFiLt~~n~kIp~~g~IYS~Neg~~~~w- 230 (343)
T KOG1458|consen 152 LLSDDEPTIKDVLQPGKELVAAGYALYGSATMLVLTLGSGVHGFTLDPSIGEFILTHPNIKIPEKGKIYSINEGYAADW- 230 (343)
T ss_pred cCCCCCcchhhhhccchhhhhhhheeeccceEEEEEecCCccceeecCcccceEEecCccccCCCCceeeccchhhhcc-
Confidence 3344433333333211 1222223333 21 13333332222 22233333332233333
Q ss_pred hHHHHHHHHHHhh------cCCccccchHHHhHHHHHc-cccCEEEecCCC-------ccchHHHHHHHHHcCCcccccC
Q psy5224 1082 SEEYAKIFQIITK------CKNLRNIGTSSLNLAYVAS-GKLDGFFEKGLK-------PWNIAAGSLLIIESGGIISNFK 1147 (1178)
Q Consensus 1082 ~~~~~~~~~~~~~------~~~~r~~Gs~~~~~~~va~-G~~d~~~~~~~~-------~wD~aA~~~i~~eaGg~v~d~~ 1147 (1178)
++...++.+.... ...-|..||.+.|+-+..- |..-.|-....+ -+++.+-..++|.|||..+|-+
T Consensus 231 d~~~~~Yi~~~k~p~~~~~pysaRYvGSMVaDvHRTllyGGif~yP~~~~spngKLRLLYE~~PmafliEqAGG~asdgk 310 (343)
T KOG1458|consen 231 DEGLTEYIDKKKYPKKGKKPYSARYVGSMVADVHRTLLYGGIFLYPADKKSPNGKLRLLYECNPMAFLIEQAGGKASDGK 310 (343)
T ss_pred chHHHHHHHhhhccCCCCCCcceeeeccchhhhhhhheeCcEEeccCCCCCCCccEEEEEeeccHHHHHHhccCcccCCc
Confidence 3334444443322 2356888998888765443 655555543222 3999999999999999999976
Q ss_pred CC-----CCCCCCC-cEEEeChHHHHHHHHHH
Q psy5224 1148 GE-----KNYLYTG-DIVAGNQKIFSQIISLI 1173 (1178)
Q Consensus 1148 G~-----~~~~~~~-~iva~~~~l~~~l~~~l 1173 (1178)
-+ |...+.+ .+.-++++=.+++++.+
T Consensus 311 ~~iLDi~P~~iHqR~pi~lGS~~dV~e~~~~~ 342 (343)
T KOG1458|consen 311 KRILDIVPTKIHQRSPIFLGSKEDVEEFEEYL 342 (343)
T ss_pred cceeeccchhhccccceeecCHHHHHHHHHhh
Confidence 33 2223333 34457776666666544
|
|
| >PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.017 Score=63.35 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=100.5
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEEeeccCCc-----------CCCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFLIKKSNYL-----------TNFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~iigEE~~~~-----------~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
..+|.++-+..++.|...- -+.-++||-+-++ ....++.-.-|||||||+.-++|.|.--..+|..++
T Consensus 32 ~~aD~aAv~AMR~~ln~v~~~G~VVIGEGE~DeAPMLyiGE~VG~g~gp~vDIAVDPlEGT~l~A~g~~nAisViA~a~~ 111 (319)
T PRK09479 32 NAADGAAVDAMRKMLNTVPIDGTVVIGEGERDEAPMLYIGEKVGTGGGPEVDIAVDPLEGTTLTAKGQPNALAVLAVAER 111 (319)
T ss_pred HHHHHHHHHHHHHHhccCCcceEEEeCCCCccCCCccccCccccCCCCCceeEEECCccchhhhhCCCCCcEEEEEEcCC
Confidence 4689999999999998753 3455667643211 111234568899999999999999999888999888
Q ss_pred CeEEEEEEEecC--CCcEEEEecCCceEEcCe-------ecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh-hc
Q psy5224 1026 KQITHSVIYDPI--RNDLFTAIKGCGAYLNEK-------RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT-KC 1095 (1178)
Q Consensus 1026 g~pv~gvV~~P~--~~~~~~a~~g~ga~~n~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1095 (1178)
|. ..+.|. .+.+..+-+.+|..--+. .+.....++.++..+..- +++++++ +.+..+ ..
T Consensus 112 G~----ll~aPd~YM~KiavGp~~~g~vdl~~p~~eNl~~~A~algk~v~dltV~vL---dRpRH~~----lI~eiR~~G 180 (319)
T PRK09479 112 GS----LLHAPDMYMEKLAVGPEAKGVVDLDAPVAENLRAVAKALGKDVSDLTVVVL---DRPRHEE----LIAEIREAG 180 (319)
T ss_pred CC----cCCCcccceeeeeeCcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHH----HHHHHHHcC
Confidence 73 333343 222333333344432222 222334445555444443 2222222 233222 23
Q ss_pred CCccccch-HHHhHHH--HHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1096 KNLRNIGT-SSLNLAY--VASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1096 ~~~r~~Gs-~~~~~~~--va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
.++|...- +...... .-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 181 ari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVla-AaAlkclGG~m 230 (319)
T PRK09479 181 ARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLA-AAALKCLGGEM 230 (319)
T ss_pred CeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHH-HHHHHhcCcee
Confidence 44544321 2322222 333578999998888877776 44568888875
|
|
| >PF10125 NADHdeh_related: NADH dehydrogenase I, subunit N related protein; InterPro: IPR017059 This group contains membrane proteins that are predicted to be transmembrane subunits (EhaH) of multisubunit membrane-bound [NiFe]-hydrogenase Eha complexes | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0054 Score=61.51 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=92.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q psy5224 265 KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYIS 344 (1178)
Q Consensus 265 ~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~ 344 (1178)
|.+||.+...- ....+.+.++|+++|-+|.-+..++=.-++.--+++.-.+||+.|=+...++|.+++-|..++...+
T Consensus 69 k~rRfmAI~CG--lAtagam~TGDlFnftLF~aliGI~NIGIVsaVk~~~VLnaAf~YGliamiaslPLFGgAAiiLa~t 146 (219)
T PF10125_consen 69 KIRRFMAIVCG--LATAGAMLTGDLFNFTLFLALIGISNIGIVSAVKQEWVLNAAFQYGLIAMIASLPLFGGAAIILAKT 146 (219)
T ss_pred HHHHHHHHHHH--HHhhccceecchHHHHHHHHHHcccceeeeeehhhHHHHHHHHHhhHHHHHHccccchhHHHHHHcc
Confidence 44555444333 2457889999999999999999988777775545555679999999999999999999999888888
Q ss_pred hhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCccccccc
Q psy5224 345 NKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLP 388 (1178)
Q Consensus 345 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp 388 (1178)
| |+++.++.+...+ .....-.++.+|..-..|+.||+.==.
T Consensus 147 G-TLSi~EL~~~~~~--~~~~~k~ll~~Gv~GEtGvAPFYaaKA 187 (219)
T PF10125_consen 147 G-TLSIFELAKMAGD--MPLYAKILLAIGVIGETGVAPFYAAKA 187 (219)
T ss_pred C-cccHHHHhccCCc--chHHHHHHHHhHhccccCcchhhhhHH
Confidence 8 9998888765332 334455678889999999999986433
|
The energy-converting hydrogenase A (eha) operon encodes a putative multisubunit membrane-bound [NiFe]-hydrogenase Eha in Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133). Sequence analysis of the eha operon indicates that it encodes at least 20 proteins, including the [NiFe]-hydrogenase large subunit (IPR014363 from INTERPRO), the [NiFe]-hydrogenase small subunit (PIRSF002913 from PIRSF), and two broadly conserved integral membrane proteins (this entry and PIRSF000215 from PIRSF). These four proteins show high sequence similarity to subunits of the Ech hydrogenase from Methanosarcina barkeri, Escherichia coli hydrogenases 3 and 4 (Hyc and Hyf), and CO-induced hydrogenase from Rhodospirillum rubrum (Coo), all of which form a distinct group of multisubunit membrane-bound [NiFe]-hydrogenases (together called hydrogenase-3-type hydrogenases). In addition to these four subunits, the eha operon encodes a 6[4Fe-4S] polyferredoxin, a 10[4Fe-4S] polyferredoxin, ten other predicted integral membrane proteins (PIRSF005019 from PIRSF, PIRSF019706 from PIRSF, PIRSF036534 from PIRSF, PIRSF006581 from PIRSF, PIRSF036535 from PIRSF, PIRSF019373 from PIRSF, PIRSF019136 from PIRSF, PIRSF036537 from PIRSF, PIRSF036538 from PIRSF, PIRSF004953 from PIRSF), and four hydrophilic subunits (PIRSF005292 from PIRSF, PIRSF019370 from PIRSF, PIRSF006414 from PIRSF, PIRSF000536 from PIRSF) (the latter two hydrophilic subunits are members of well-characterised enzyme families but lack the essential amino acids assumed to form the active site []). All of these proteins are expressed and therefore thought to be functional subunits of the Eha hydrogenase complex []. Note, however, that the ten additional predicted integral membrane proteins are absent from Ech, Coo, Hyc, and Hyf complexes (and therefore from corresponding organisms), indicating that those complexes have a simpler membrane component than Eha []. Members of this group are homologous to the N-terminal domain of PIRSF006542 from PIRSF members (e.g., EhbF, HyfF of E. coli hydrogenase 4, amongst others). Therefore, this type of membrane subunit of Eha complex is conserved across the various hydrogenase-3-type hydrogenases (that is, they are not limited to the Eha subgroup). A protein with sequence similarity to the C-terminal part of EhbF (PIRSF006542 from PIRSF) is not present in the Eha complex (not encoded by the eha operon). Based on sequence similarity and genome context analysis, other organisms such as Methanopyrus kandleri,Methanocaldococcus jannaschii, and M. thermoautotrophicum also encode Eha-like [NiFe]-hydrogenase-3-type complexes and have very similar eha operon structure. |
| >cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.021 Score=62.34 Aligned_cols=174 Identities=13% Similarity=0.090 Sum_probs=99.9
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEEeeccCCc---------C--CCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFLIKKSNYL---------T--NFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~iigEE~~~~---------~--~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
.++|.++-+..++.|...- -+.-++||-+-++ - ...++.-.-|||+|||+.-++|.|.--..+|..++
T Consensus 29 ~~aD~aAv~AMR~~ln~v~~~G~VVIGEGE~DeAPMLyiGE~vG~g~gp~vDIAVDPlEGT~l~A~g~~nAisViA~a~r 108 (309)
T cd01516 29 NAADQAAVDAMREALNGLPMRGTVVIGEGERDEAPMLYIGEEVGTGKGPEVDIAVDPLEGTTLLAKGQPNAIAVIAVAEK 108 (309)
T ss_pred HHHHHHHHHHHHHHhccCCcceEEEECCCCccCCCcccCCccccCCCCCceeEEECCccCchhhhCCCCCcEEEEEEcCC
Confidence 4689999999999998753 3455667643211 1 11235668899999999999999999888899888
Q ss_pred CeEEEEEEEecC--CCcEEEEecCCceEEcCee-------cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh-hc
Q psy5224 1026 KQITHSVIYDPI--RNDLFTAIKGCGAYLNEKR-------IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT-KC 1095 (1178)
Q Consensus 1026 g~pv~gvV~~P~--~~~~~~a~~g~ga~~n~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1095 (1178)
|. ..+.|. .+.+..+-+-+|..--+.| +.....++.++..+..- +++++++ +.+..+ ..
T Consensus 109 G~----ll~aPd~YM~KiavGp~~~g~idld~~~~~Nl~~vA~algk~v~dltV~vL---dRpRH~~----lI~eiR~~G 177 (309)
T cd01516 109 GS----LLHAPDMYMEKIAVGPGAKGVIDLDAPVAENLRAVAKALGKPVEDLTVVVL---DRPRHAA----LIEEIREAG 177 (309)
T ss_pred CC----cCCCchhceeeeeECcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHH----HHHHHHHcC
Confidence 73 334443 1222333223343321222 22233444555444433 2222222 233222 23
Q ss_pred CCccccch-HHHhHHH--HHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1096 KNLRNIGT-SSLNLAY--VASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1096 ~~~r~~Gs-~~~~~~~--va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
.+++..+- +...... .-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 178 ari~Li~DGDV~~ai~~~~~~s~vD~~~GiGGaPEGVla-AaAlkclGG~~ 227 (309)
T cd01516 178 ARIKLIPDGDVAAAIATALPGSGVDVLMGIGGAPEGVLA-AAALKCLGGEM 227 (309)
T ss_pred CeEEEeccccHHHHHHHhCCCCCeeEEEECCCChHHHHH-HHHHHhCCcee
Confidence 44544321 2222222 344678999998888877776 44568888874
|
A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source. |
| >TIGR00330 glpX fructose-1,6-bisphosphatase, class II | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.034 Score=60.77 Aligned_cols=174 Identities=10% Similarity=0.042 Sum_probs=99.9
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEEeeccC---------CcC--CCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFLIKKSN---------YLT--NFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~iigEE~~---------~~~--~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
.++|.++-+.+++.|...- -+.-++||-+- +.- +..++.-.-|||||||+.-++|.|.--..+|..++
T Consensus 29 ~~aD~aAv~AMR~~ln~v~~~G~VVIGEGE~DeAPMLyiGE~VG~g~gp~vDIAVDPlEGT~l~A~g~~nAisViA~a~r 108 (321)
T TIGR00330 29 NTADGAAVNAMRIMLNQVNMDGTIVIGEGEIDEAPMLYIGEKVGTGRGPAVDIAVDPIEGTRMTAMGQSNALAVLAVGDK 108 (321)
T ss_pred HHHHHHHHHHHHHHhccCCcceEEEECCCcccCCCccccCccccCCCCCceeEEECCccCchhhhCCCCCCEEEEEEcCC
Confidence 4689999999999998753 34556676321 111 11245568899999999999999999888899888
Q ss_pred CeEEEEEEEecCC--CcEEEEecCCceEEcCee-------cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh-hc
Q psy5224 1026 KQITHSVIYDPIR--NDLFTAIKGCGAYLNEKR-------IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT-KC 1095 (1178)
Q Consensus 1026 g~pv~gvV~~P~~--~~~~~a~~g~ga~~n~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1095 (1178)
|. ..+.|.. +.+..+-+-+|..--+.| +.....++.++-.+..- ++++++ .+.+..+ ..
T Consensus 109 G~----ll~aPd~YM~KiavGp~~~G~vdl~~p~~~Nl~~vA~algk~~~dltV~vL---dRpRH~----~lI~eiR~~G 177 (321)
T TIGR00330 109 GT----FLNAPDMYMEKLVVGPGAKGTIDLNLPLADNLRNVAKALGKPLSDLTVTIL---AKPRHD----AVIAEMQQLG 177 (321)
T ss_pred CC----cCCCchhceeeeeECcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHH----HHHHHHHHcC
Confidence 73 3334431 222333223344321222 22233445555444433 222222 2233222 23
Q ss_pred CCccccch-HHHhHHH--HHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1096 KNLRNIGT-SSLNLAY--VASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1096 ~~~r~~Gs-~~~~~~~--va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
.+++...- +...... .-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 178 ari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGAPEGVla-AaAlkclGG~m 227 (321)
T TIGR00330 178 VRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVS-AAAIRALGGDM 227 (321)
T ss_pred CeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHH-HHHHHhcCcee
Confidence 44544321 2222222 344678999998888887776 45578899874
|
In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase. |
| >PRK12388 fructose-1,6-bisphosphatase II-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.043 Score=60.28 Aligned_cols=175 Identities=10% Similarity=0.030 Sum_probs=100.1
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEEeeccCCc---------C--CCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFLIKKSNYL---------T--NFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~iigEE~~~~---------~--~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
..+|.++-+..++.|.... -+.-++||-+-++ - +..++.-.-|||+|||+.-++|.|.--..+|..++
T Consensus 29 ~~AD~AAv~AMR~~ln~v~~~G~VVIGEGE~DeAPMLyiGE~vG~g~gp~vDIAVDPlEGT~l~A~g~~nAisViA~a~r 108 (321)
T PRK12388 29 NKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPR 108 (321)
T ss_pred hhHHHHHHHHHHHHhccCCcceEEEeCCCCcccCCcccCCccccCCCCCceeEEECCcccchhhhCCCCCcEEEEEEcCC
Confidence 4689999999999998753 3455566643211 1 11244568899999999999999999888999988
Q ss_pred CeEEEEEEEecC--CCcEEEEecCCceEEcCe-------ecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcC
Q psy5224 1026 KQITHSVIYDPI--RNDLFTAIKGCGAYLNEK-------RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK 1096 (1178)
Q Consensus 1026 g~pv~gvV~~P~--~~~~~~a~~g~ga~~n~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1178)
|. ..+.|. .+.+..+-+-+|..--+. .+.....++.++-.+..- +++++++..++. -+...
T Consensus 109 G~----ll~aPd~YM~KiavGp~~~G~idl~~p~~~Nl~~vA~algk~v~dltV~vL---dRpRH~~lI~ei---R~~Ga 178 (321)
T PRK12388 109 DS----LLHAPDMYMKKLVVNRLAAGAIDLSLPLADNLRNVARALGKPLDKLRMVTL---DKPRLSAAIEEA---TQLGV 178 (321)
T ss_pred CC----cCCCchhceeeeeECcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHHHHHHH---HHcCC
Confidence 83 333343 122223222334332122 222233445555444433 222222222222 22234
Q ss_pred Cccccch-HHHhHHH--HHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1097 NLRNIGT-SSLNLAY--VASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1097 ~~r~~Gs-~~~~~~~--va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
+++...- +...... .-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 179 rI~Li~DGDVa~ai~~~~~~s~vD~~~GiGGAPEGVla-AaAlkclGG~m 227 (321)
T PRK12388 179 KVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVIS-ACAVKALGGDM 227 (321)
T ss_pred eEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHH-HHHHHhCCcee
Confidence 4544321 2322222 344678999998888887776 45578899875
|
|
| >PF03320 FBPase_glpX: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; InterPro: IPR004464 Gluconeogenesis is an important metabolic pathway, which produces glucose from noncarbohydrate precursors such as organic acids, fatty acids, amino acids, or glycerol | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.2 Score=55.16 Aligned_cols=175 Identities=14% Similarity=0.075 Sum_probs=91.8
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCeEEeeccCCc-----------CCCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTY-PSYAFLIKKSNYL-----------TNFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~-p~~~iigEE~~~~-----------~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
..+|.++-+.+++.|...- -+.-++||.+-++ ....++.-.-|||+|||+..++|.|.--..+|..++
T Consensus 29 ~~AD~AAv~AMR~~l~~v~~~G~VVIGEGE~DeAPMLyiGE~vG~g~gp~vDIAVDPleGT~l~A~g~~nAisViA~A~r 108 (309)
T PF03320_consen 29 NAADQAAVDAMRRALNTVPIDGTVVIGEGEKDEAPMLYIGEKVGTGDGPEVDIAVDPLEGTTLCAKGQPNAISVIAAAER 108 (309)
T ss_dssp HHHHHHHHHHHHHHHTTSSSEEEEEESSCSTTT-SSSBTT-EESGCGSTCEEEEEEEEETHHHHHCT-SS-EEEEEEEET
T ss_pred HHHHHHHHHHHHHHhCccCeeEEEEeCCCccCCCCcccccccccCCCCccccEEeccccchhhhhCCCCCcEEEEEecCC
Confidence 4789999999999998753 2345567743211 122345678999999999999999999999999998
Q ss_pred CeEEEEEEEecCC--CcEEEEecCCceEEcCee-------cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcC
Q psy5224 1026 KQITHSVIYDPIR--NDLFTAIKGCGAYLNEKR-------IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK 1096 (1178)
Q Consensus 1026 g~pv~gvV~~P~~--~~~~~a~~g~ga~~n~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1178)
|. ..+.|.. +.+..+-+-+|..--+.| +.....++.++-.+..- +++++++..++. -+...
T Consensus 109 G~----ll~aPd~YMeKiavgp~~~g~idld~p~~~Nl~~vA~a~~k~v~dltV~vL---dRpRH~~lI~ei---R~~Ga 178 (309)
T PF03320_consen 109 GS----LLHAPDMYMEKIAVGPEAKGVIDLDAPPEENLRAVAKALGKPVSDLTVVVL---DRPRHEELIEEI---REAGA 178 (309)
T ss_dssp T-----C----SSEEEEEEE-GGGTTTS-TTS-HHHHHHHHHHHCTS-GGG-EEEEE----SGGGHHHHHHH---HHCT-
T ss_pred CC----cccCchhceeeeEECcccCCeECCCCCHHHHHHHHHHHcCCChHHeEEEEE---cCchHHHHHHHH---HHcCC
Confidence 84 3333432 112222222333211222 22233444455444433 222333322222 12233
Q ss_pred Cccccc-hHHHhHHHHHcc--ccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1097 NLRNIG-TSSLNLAYVASG--KLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1097 ~~r~~G-s~~~~~~~va~G--~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
+++..+ .+.......+.. ..|.|+..+-.|--+.+ ..-+|..||..
T Consensus 179 rv~Li~DGDVa~ai~~~~~~sgvD~~~GiGGAPEGVla-AaAlkclGG~m 227 (309)
T PF03320_consen 179 RVKLISDGDVAGAIATALPDSGVDMLMGIGGAPEGVLA-AAALKCLGGQM 227 (309)
T ss_dssp EEEEESS-HHHHHHHTTCCTSS-SEEEEEEEHHHHHHH-HHHHHHCT-EE
T ss_pred eEEEeCcCcHHHHHHHhcCCCCccEEEECCCCcHHHHH-HHHHHhCCceE
Confidence 444332 244444445554 48999987776766665 45568888865
|
Fructose-1,6-bisphosphatase, a key enzyme of gluconeogenesis, is found in all organisms, and five different classes of these enzymes have been identified. This entry represents the class 2 fructose-1,6-bisphosphatases, which include GlpX and YggF of Escherichia coli (strain K12), which show different catalytic properties. The crystal structure of GlpX has been determined in a free state and in the complex with a substrate (fructose 1,6-bisphosphate) or inhibitor (phosphate). The crystal structure of the ligand-free GlpX revealed a compact, globular shape with two alpha/beta-sandwich domains. The core fold of GlpX is structurally similar to that of Li+-sensitive phosphatases suggesting that they have a common evolutionary origin and catalytic mechanism. The structure of the GlpX complex with fructose 1,6-bisphosphate revealed that the active site is located between two domains and accommodates several conserved residues coordinating two metal ions and the substrate. A third metal ion is bound to phosphate 6 of the substrate. Inorganic phosphate strongly inhibited activity of both GlpX and YggF, and the crystal structure of the GlpX complex with phosphate demonstrated that the inhibitor molecule binds to the active site. Alanine replacement mutagenesis of GlpX identifies 12 conserved residues important for activity and suggested that Thr(90) is the primary catalytic residue []. A number of the proteins in this entry, particularly those from algae are bi functional and can catalyzes the hydrolysis of fructose 1,6-bisphosphate and sedoheptulose 1,7-bisphosphate to fructose 6-phosphate and sedoheptulose 7-phosphate, respectively. ; GO: 0006071 glycerol metabolic process; PDB: 3RPL_C 3ROJ_A 3D1R_A 2R8T_A 3BIH_A 3BIG_A 1NI9_A. |
| >COG4078 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.017 Score=56.76 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=91.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q psy5224 265 KLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYIS 344 (1178)
Q Consensus 265 ~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~~~~~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~ 344 (1178)
+.+++.+... -....|.+.++|+++|-+|..+..++=.-++..-++....+++.+|=+...++|.+++-|..++...+
T Consensus 69 kIrr~lAiVc--glAtaGam~TgDlFnftLFlsL~GI~NiGivsaV~~e~vL~aafqYGLiamiAsLPLFGgAaliLast 146 (221)
T COG4078 69 KIRRALAIVC--GLATAGAMTTGDLFNFTLFLSLLGISNIGIVSAVEDEFVLEAAFQYGLIAMIASLPLFGGAALILAST 146 (221)
T ss_pred HHHHHHHHHH--hhhhccceeecchHHHHHHHHHHcccccceeehhhHHHHHHHHHHHhHHHHHhcccccCceeeEEecC
Confidence 4445543333 23457888999999999999999988777775444555679999999999999999999888887778
Q ss_pred hhhHhhHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCCcccccccCcc
Q psy5224 345 NKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAH 391 (1178)
Q Consensus 345 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~Wlp~~~ 391 (1178)
| |++..++...+.+. .....-.++..|..-..|+.||+.==.|.+
T Consensus 147 G-TLSv~EL~km~~~~-~l~f~k~ll~aGv~GEtGvaPFYA~KaemF 191 (221)
T COG4078 147 G-TLSVHELMKMPKGA-TLTFGKALLTAGVIGETGVAPFYAVKAEMF 191 (221)
T ss_pred C-ceeHHHhhcCCCCC-EehHHHHHHHcccccccccchhHHHHHHHh
Confidence 8 88888876543322 233455677888889999999986444443
|
|
| >COG1494 GlpX Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.15 Score=54.87 Aligned_cols=174 Identities=13% Similarity=0.123 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCeEEeeccCCc-----------CCCCCccEEEEeccCCchHHhccCCCeEEEEEEEECC
Q psy5224 959 NINKASEKIITKILFNTYP-SYAFLIKKSNYL-----------TNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKK 1026 (1178)
Q Consensus 959 ~aD~~~e~~i~~~L~~~~p-~~~iigEE~~~~-----------~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g 1026 (1178)
.+|.++-+..++.+.+..= +--++||-+-++ ....++--.-+||+|||+--.+|.|.--..+|..++|
T Consensus 31 ~aD~aAV~AMR~~lN~v~m~G~VVIGEGE~DeAPMLYIGEeVG~g~g~evDIAVDPlEGT~l~A~G~pnalaVlA~a~kG 110 (332)
T COG1494 31 AADGAAVDAMRQMLNSVAMRGTVVIGEGEIDEAPMLYIGEEVGTGYGPEVDIAVDPIEGTNLTAKGQPNALAVLAVAEKG 110 (332)
T ss_pred cccHHHHHHHHHHhcccCcceeEEecCcccccCceeecchhhcCCCCcceeEEecCcCCceeeecCCCCceEEEEEcCCC
Confidence 5778888888888877533 344455532111 1123456688999999999999999998889998887
Q ss_pred eEEEEEEEecC--CCcEEEEecCCceEEcCee-------cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCC
Q psy5224 1027 QITHSVIYDPI--RNDLFTAIKGCGAYLNEKR-------IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKN 1097 (1178)
Q Consensus 1027 ~pv~gvV~~P~--~~~~~~a~~g~ga~~n~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1178)
.- .+.|- .+.+..+-.-+|..--+.| +.....+++++-++.+- .++++.+. +.+.-+...+
T Consensus 111 ~l----l~APD~YM~Ki~VgP~a~g~IDl~~p~~~Nl~~vAkalgk~~~dl~vvil---drpRH~~l---I~~ir~~Gar 180 (332)
T COG1494 111 TL----LHAPDMYMEKIAVGPEAKGVIDLDAPLADNLRAVAKALGKSLSDLTVVIL---DRPRHAEL---IAEIRAAGAR 180 (332)
T ss_pred cc----ccCchhhhhheeeCccccceeecCCCHHHHHHHHHHHhCCCHHHeEEEEe---cCchHHHH---HHHHHHhCCE
Confidence 53 23342 1112221111222211222 22233445555444443 12222222 2222233445
Q ss_pred ccccch----HHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCccc
Q psy5224 1098 LRNIGT----SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIIS 1144 (1178)
Q Consensus 1098 ~r~~Gs----~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~ 1144 (1178)
+|..+- ++.. |..-....|.++..+-.|--+.+ ++-+|..||..-
T Consensus 181 V~li~DGDVa~~i~-t~~~~tgvd~l~GiGGAPEGVis-AaAir~lGG~mq 229 (332)
T COG1494 181 VRLIPDGDVAAAIL-TCFPDTGVDLLYGIGGAPEGVIS-AAAIRALGGDMQ 229 (332)
T ss_pred EEEecCcchhhhhe-eccCCCCeeEEEEcCCCcHHHHH-HHHHHHccchhh
Confidence 555431 1222 22345668888887777777765 445688888653
|
|
| >PF00662 Oxidored_q1_N: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; InterPro: IPR001516 NADH:ubiquinone oxidoreductase (complex I) (1 | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.13 Score=43.49 Aligned_cols=47 Identities=23% Similarity=0.390 Sum_probs=35.2
Q ss_pred cccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHH
Q psy5224 228 YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFL 274 (1178)
Q Consensus 228 ~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l 274 (1178)
..++++.+.+|.+|..|..++++++.++.+||..+ +++.++|+..+.
T Consensus 12 ~~~i~~~~~~D~ls~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~ 61 (62)
T PF00662_consen 12 SLNISFSFYLDPLSALFLLLVLFISSLVHIYSIGYMSHDPNYNRFFSYLS 61 (62)
T ss_dssp S-EEEEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHTSS-S-HHHHHHHHH
T ss_pred cEeEEEEEEEHHhHHHHHHHHHHhheeeeeccccccccCCCcchhhheeC
Confidence 45677788899999999999999999999999543 445667776554
|
6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This domain represents an N-terminal extension of IPR001750 from INTERPRO. It contains NADH-Ubiquinone chain 5 and eubacterial chain L; these are found in the NADH:ubiquinone oxidoreductase (complex I) which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane [].; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport, 0055114 oxidation-reduction process; PDB: 3RKO_L. |
| >PF10125 NADHdeh_related: NADH dehydrogenase I, subunit N related protein; InterPro: IPR017059 This group contains membrane proteins that are predicted to be transmembrane subunits (EhaH) of multisubunit membrane-bound [NiFe]-hydrogenase Eha complexes | Back alignment and domain information |
|---|
Probab=91.52 E-value=0.27 Score=49.72 Aligned_cols=105 Identities=18% Similarity=0.334 Sum_probs=84.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhhhccCC
Q psy5224 596 ISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNIN 675 (1178)
Q Consensus 596 ~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~~~~~~ 675 (1178)
..+.|++++-++.-+..++-..++.. -+++..++++++|=++..++|.+++-|-.+.-..+|++++-++.+. .
T Consensus 86 m~TGDlFnftLF~aliGI~NIGIVsa-Vk~~~VLnaAf~YGliamiaslPLFGgAAiiLa~tGTLSi~EL~~~------~ 158 (219)
T PF10125_consen 86 MLTGDLFNFTLFLALIGISNIGIVSA-VKQEWVLNAAFQYGLIAMIASLPLFGGAAIILAKTGTLSIFELAKM------A 158 (219)
T ss_pred ceecchHHHHHHHHHHcccceeeeee-hhhHHHHHHHHHhhHHHHHHccccchhHHHHHHccCcccHHHHhcc------C
Confidence 44679999988888888888888754 3455689999999999999999999999998899999999888653 1
Q ss_pred hhHHHHHHHHHHHHHHHhhccCcccccccccc
Q psy5224 676 CSVLALSLLLIIVGLSFKLGISPFHMWVPDVY 707 (1178)
Q Consensus 676 ~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~ 707 (1178)
.+.....-.++.+|-.-+.|+.||+.=-.+..
T Consensus 159 ~~~~~~~k~ll~~Gv~GEtGvAPFYaaKAEmf 190 (219)
T PF10125_consen 159 GDMPLYAKILLAIGVIGETGVAPFYAAKAEMF 190 (219)
T ss_pred CcchHHHHHHHHhHhccccCcchhhhhHHHHh
Confidence 22345566788899999999999987544444
|
The energy-converting hydrogenase A (eha) operon encodes a putative multisubunit membrane-bound [NiFe]-hydrogenase Eha in Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133). Sequence analysis of the eha operon indicates that it encodes at least 20 proteins, including the [NiFe]-hydrogenase large subunit (IPR014363 from INTERPRO), the [NiFe]-hydrogenase small subunit (PIRSF002913 from PIRSF), and two broadly conserved integral membrane proteins (this entry and PIRSF000215 from PIRSF). These four proteins show high sequence similarity to subunits of the Ech hydrogenase from Methanosarcina barkeri, Escherichia coli hydrogenases 3 and 4 (Hyc and Hyf), and CO-induced hydrogenase from Rhodospirillum rubrum (Coo), all of which form a distinct group of multisubunit membrane-bound [NiFe]-hydrogenases (together called hydrogenase-3-type hydrogenases). In addition to these four subunits, the eha operon encodes a 6[4Fe-4S] polyferredoxin, a 10[4Fe-4S] polyferredoxin, ten other predicted integral membrane proteins (PIRSF005019 from PIRSF, PIRSF019706 from PIRSF, PIRSF036534 from PIRSF, PIRSF006581 from PIRSF, PIRSF036535 from PIRSF, PIRSF019373 from PIRSF, PIRSF019136 from PIRSF, PIRSF036537 from PIRSF, PIRSF036538 from PIRSF, PIRSF004953 from PIRSF), and four hydrophilic subunits (PIRSF005292 from PIRSF, PIRSF019370 from PIRSF, PIRSF006414 from PIRSF, PIRSF000536 from PIRSF) (the latter two hydrophilic subunits are members of well-characterised enzyme families but lack the essential amino acids assumed to form the active site []). All of these proteins are expressed and therefore thought to be functional subunits of the Eha hydrogenase complex []. Note, however, that the ten additional predicted integral membrane proteins are absent from Ech, Coo, Hyc, and Hyf complexes (and therefore from corresponding organisms), indicating that those complexes have a simpler membrane component than Eha []. Members of this group are homologous to the N-terminal domain of PIRSF006542 from PIRSF members (e.g., EhbF, HyfF of E. coli hydrogenase 4, amongst others). Therefore, this type of membrane subunit of Eha complex is conserved across the various hydrogenase-3-type hydrogenases (that is, they are not limited to the Eha subgroup). A protein with sequence similarity to the C-terminal part of EhbF (PIRSF006542 from PIRSF) is not present in the Eha complex (not encoded by the eha operon). Based on sequence similarity and genome context analysis, other organisms such as Methanopyrus kandleri,Methanocaldococcus jannaschii, and M. thermoautotrophicum also encode Eha-like [NiFe]-hydrogenase-3-type complexes and have very similar eha operon structure. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1178 | ||||
| 3rko_L | 613 | Crystal Structure Of The Membrane Domain Of Respira | 4e-57 | ||
| 3rko_L | 613 | Crystal Structure Of The Membrane Domain Of Respira | 2e-04 | ||
| 4he8_L | 606 | Crystal Structure Of The Membrane Domain Of Respira | 2e-51 | ||
| 4he8_L | 606 | Crystal Structure Of The Membrane Domain Of Respira | 7e-05 | ||
| 3rko_M | 509 | Crystal Structure Of The Membrane Domain Of Respira | 3e-50 | ||
| 2qfl_A | 267 | Structure Of Suhb: Inositol Monophosphatase And Ext | 8e-46 | ||
| 3rko_N | 485 | Crystal Structure Of The Membrane Domain Of Respira | 1e-35 | ||
| 3luz_A | 267 | Crystal Structure Of Extragenic Suppressor Protein | 3e-32 | ||
| 4he8_N | 427 | Crystal Structure Of The Membrane Domain Of Respira | 3e-27 | ||
| 1ima_A | 277 | Structural Analysis Of Inositol Monophosphatase Com | 1e-21 | ||
| 2hhm_A | 276 | Structure Of Inositol Monophosphatase, The Putative | 1e-21 | ||
| 4he8_M | 469 | Crystal Structure Of The Membrane Domain Of Respira | 3e-20 | ||
| 2pcr_A | 264 | Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosp | 2e-19 | ||
| 4as5_A | 277 | Structure Of Mouse Inositol Monophosphatase 1 Lengt | 2e-19 | ||
| 2bji_A | 277 | High Resolution Structure Of Myo-Inositol Monophosp | 4e-19 | ||
| 2p3n_A | 256 | Thermotoga Maritima Impase Tm1415 Length = 256 | 4e-19 | ||
| 2czh_A | 299 | Crystal Structure Of Human Myo-Inositol Monophospha | 5e-19 | ||
| 2fvz_A | 273 | Human Inositol Monophosphosphatase 2 Length = 273 | 5e-19 | ||
| 3t0j_A | 283 | Crystal Structure Of Inositol Monophosphatase - Ii | 2e-16 | ||
| 1xi6_A | 262 | Extragenic Suppressor From Pyrococcus Furiosus Pfu- | 2e-14 | ||
| 2q74_A | 299 | Mycobacterium Tuberculosis Suhb Length = 299 | 4e-14 | ||
| 1vdw_A | 254 | A Hypothetical Protein Ph1897 From Pyrococcus Horik | 3e-13 | ||
| 3ryd_A | 273 | Crystal Strucutre Of Ca Bound Impase Family Protein | 3e-11 | ||
| 3qmf_A | 273 | Crystal Strucuture Of An Inositol Monophosphatase F | 3e-11 | ||
| 3b8b_A | 292 | Crystal Structure Of Cysq From Bacteroides Thetaiot | 3e-08 | ||
| 1dk4_A | 252 | Crystal Structure Of Mj0109 Gene Product Inositol M | 2e-07 |
| >pdb|3RKO|L Chain L, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From E. Coli At 3.0 Angstrom Resolution Length = 613 | Back alignment and structure |
|
| >pdb|3RKO|L Chain L, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From E. Coli At 3.0 Angstrom Resolution Length = 613 | Back alignment and structure |
|
| >pdb|4HE8|L Chain L, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From Thermus Thermophilus Length = 606 | Back alignment and structure |
|
| >pdb|4HE8|L Chain L, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From Thermus Thermophilus Length = 606 | Back alignment and structure |
|
| >pdb|3RKO|M Chain M, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From E. Coli At 3.0 Angstrom Resolution Length = 509 | Back alignment and structure |
|
| >pdb|2QFL|A Chain A, Structure Of Suhb: Inositol Monophosphatase And Extragenic Suppressor From E. Coli Length = 267 | Back alignment and structure |
|
| >pdb|3RKO|N Chain N, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From E. Coli At 3.0 Angstrom Resolution Length = 485 | Back alignment and structure |
|
| >pdb|3LUZ|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb From Bartonella Henselae, Via Combined Iodide Sad Molecular Replacement Length = 267 | Back alignment and structure |
|
| >pdb|4HE8|N Chain N, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From Thermus Thermophilus Length = 427 | Back alignment and structure |
|
| >pdb|1IMA|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes With Substrates Length = 277 | Back alignment and structure |
|
| >pdb|2HHM|A Chain A, Structure Of Inositol Monophosphatase, The Putative Target Of Lithium Therapy Length = 276 | Back alignment and structure |
|
| >pdb|4HE8|M Chain M, Crystal Structure Of The Membrane Domain Of Respiratory Complex I From Thermus Thermophilus Length = 469 | Back alignment and structure |
|
| >pdb|2PCR|A Chain A, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase (Aq_1983) From Aquifex Aeolicus Vf5 Length = 264 | Back alignment and structure |
|
| >pdb|4AS5|A Chain A, Structure Of Mouse Inositol Monophosphatase 1 Length = 277 | Back alignment and structure |
|
| >pdb|2BJI|A Chain A, High Resolution Structure Of Myo-Inositol Monophosphatase, The Target Of Lithium Therapy Length = 277 | Back alignment and structure |
|
| >pdb|2P3N|A Chain A, Thermotoga Maritima Impase Tm1415 Length = 256 | Back alignment and structure |
|
| >pdb|2CZH|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2 (Impa2) With Phosphate Ion (Orthorhombic Form) Length = 299 | Back alignment and structure |
|
| >pdb|2FVZ|A Chain A, Human Inositol Monophosphosphatase 2 Length = 273 | Back alignment and structure |
|
| >pdb|3T0J|A Chain A, Crystal Structure Of Inositol Monophosphatase - Ii From Staphylococcus Aureus Mssa476 Length = 283 | Back alignment and structure |
|
| >pdb|1XI6|A Chain A, Extragenic Suppressor From Pyrococcus Furiosus Pfu-1862794- 001 Length = 262 | Back alignment and structure |
|
| >pdb|2Q74|A Chain A, Mycobacterium Tuberculosis Suhb Length = 299 | Back alignment and structure |
|
| >pdb|1VDW|A Chain A, A Hypothetical Protein Ph1897 From Pyrococcus Horikoshii With Similarities For Inositol-1 Monophosphatase Length = 254 | Back alignment and structure |
|
| >pdb|3RYD|A Chain A, Crystal Strucutre Of Ca Bound Impase Family Protein From Staphylococcus Aureus Length = 273 | Back alignment and structure |
|
| >pdb|3QMF|A Chain A, Crystal Strucuture Of An Inositol Monophosphatase Family Protein (Sas2203) From Staphylococcus Aureus Mssa476 Length = 273 | Back alignment and structure |
|
| >pdb|3B8B|A Chain A, Crystal Structure Of Cysq From Bacteroides Thetaiotaomicron, A Bacterial Member Of The Inositol Monophosphatase Family Length = 292 | Back alignment and structure |
|
| >pdb|1DK4|A Chain A, Crystal Structure Of Mj0109 Gene Product Inositol Monophosphatase Length = 252 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rko_M NADH-quinone oxidoreductase subunit M; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 509 | Back alignment and structure |
|---|
Score = 499 bits (1286), Expect = e-165
Identities = 147/375 (39%), Positives = 227/375 (60%), Gaps = 11/375 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLILSGLIIGA 283
WI F I L IDGLSL + LT + ++ +L S +I+K + + + G +IG
Sbjct: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWG-----GSNRSYAAIKFFLYTLMGSLLMLISMI 338
F A+D LF+ F+E L+P++ +I WG G R AA KFF+YT L+MLI+++
Sbjct: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190
Query: 339 YLYYISNK-----SFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVE 393
L ++ +FN ++ + L + FFIAFA+K+P+ P+H WLPDAH +
Sbjct: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT GSV LA I+LK YGLLRFSLP+FP+AS F+ + + L +I I Y + +A Q D
Sbjct: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
IK+LIAY+S++HMGFV + I+ ++++ QGA+IQMI+H L ++ +FI G LY ++ TR
Sbjct: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
+ GG+ + + + F++A +PGT F+GEFMI+ + + I V+++ L+
Sbjct: 371 MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430
Query: 574 FSAAYSLCLSKNIIF 588
F++ YSL + F
Sbjct: 431 FASVYSLAMLHRAYF 445
|
| >3rko_M NADH-quinone oxidoreductase subunit M; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 509 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-21
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 50 KSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILF 106
K PLH WLPD+ + PT S + A ++ + + R S PLF S I ++
Sbjct: 234 KMPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292
Query: 107 IGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLG---VSAYTVSIFHLMTHAFFK 163
+G I F+ + Q DIKR+IAY+++S +G++ + + AY ++ ++ H
Sbjct: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
A LF+ G + H +D+R MGGL+ M SL ++ +G P F
Sbjct: 353 AGLFILCG-QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404
|
| >3rko_M NADH-quinone oxidoreductase subunit M; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 509 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 3e-20
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 14/266 (5%)
Query: 631 AAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGL 690
AA K+FI S ML I L + FN +L N S LL++ +
Sbjct: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI 229
Query: 691 SF--KLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQK 747
+F K+ + P H W+PD + A ++ L+ K + + ++ R + +
Sbjct: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL-RFSLPLFPNASAEFAP 288
Query: 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDS 807
I + L + + G A Q + KR+IAY+S++HMG +L +I + +
Sbjct: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL--------AYQG 340
Query: 808 GLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGF 867
+ +I + + G F + L T ++ + GL + W + + F + G
Sbjct: 341 AVIQMIAHGLSAAGLFILCGQLYERI--HTRDMRMMGGLWSKMKWLPALSLFFAVATLGM 398
Query: 868 PPTIGFYAKFFIFEKIFETQKIWLLL 893
P T F +F I F+ + ++
Sbjct: 399 PGTGNFVGEFMILFGSFQVVPVITVI 424
|
| >3rko_L NADH-quinone oxidoreductase subunit L; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 613 | Back alignment and structure |
|---|
Score = 377 bits (969), Expect = e-117
Identities = 134/403 (33%), Positives = 202/403 (50%), Gaps = 71/403 (17%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+++NL ++LGWE VG+ SYLLIGF+Y P A +KAF++ R+G
Sbjct: 132 LADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNE 191
Query: 47 ----------------------------------AMAKSAQFPLHTWLPDSMEGPTPASA 72
A+ KSAQ PL TWL D+M GPTP SA
Sbjct: 192 LGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSA 251
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
LIHAATMVTAG+++I R LF ++ L ++ +GA+T G ++Q DIKR++AYS
Sbjct: 252 LIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYS 311
Query: 133 TLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKY 192
T+SQ+GYM + LGV A+ +IFHLMTHAFFKALLFL++GS+I+ H Q+I MGGL K
Sbjct: 312 TMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKS 371
Query: 193 MPITCITSLIGLLSLVGAPFFS-GFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFI 251
+P+ + L+G +L P + GF+SKD + + N + L + GL + AF+
Sbjct: 372 IPLVYLCFLVGGAALSALPLVTAGFFSKD-EILAGAMANGHINLMVAGL------VGAFM 424
Query: 252 TLI-----IILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306
T + I ++ ++ A + LI+ + F A ++P
Sbjct: 425 TSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILS-------TFVGALIVPPL-- 475
Query: 307 IGTWGGSNRSYAAIKFFLYTLMGSLLML-ISMIYLYYISNKSF 348
G + L G + ++ I + ++ ++
Sbjct: 476 QGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTL 518
|
| >3rko_L NADH-quinone oxidoreductase subunit L; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 613 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-14
Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 46/411 (11%)
Query: 199 TSLIGLLSLVGAPFFSGFYSKDKKKI------WI--DYFNIYYFLGIDGLSLWFIPLTAF 250
+GL +LV A F++ ++ W+ FNI + L +DGLSL + +
Sbjct: 35 VGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTG 94
Query: 251 ITLIIILISLDIKKKLAEYMSA------FLILSGLIIGAFCAL----DGMLFYIFFEATL 300
+ +I + + YM F + L I + L + +L Y+ +E
Sbjct: 95 VGFLIHMYAS-------WYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVG 147
Query: 301 IPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSIT 359
+ +++IG + AA+K F+ T +G + + ++ LY + N +L+
Sbjct: 148 LCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELG-TLNFREMVELAPA 206
Query: 360 KIEQIWLFITF-----FIAFAIKIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYG 413
+ + K P+ TWL DA + PT S +I AA M+ G Y
Sbjct: 207 HFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYL 265
Query: 414 LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG--FVTL 471
+ R +F + +L+ + ++++ A+VQ DIK+++AYS+++ +G F+ L
Sbjct: 266 IARTH-GLF-LMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLAL 323
Query: 472 GIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL-ISNFGGIINVIPHFSVF 530
G+ + AI +++HA + +F++ G + I GG+ IP +
Sbjct: 324 GV-----QAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLC 378
Query: 531 FIIFSLANCSLPG-TSGFIGEFMIILSA-VKFNFCIGVLTSTALIFSAAYS 579
F++ A +LP T+GF + I+ A + + V ++ Y+
Sbjct: 379 FLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYT 429
|
| >3rko_L NADH-quinone oxidoreductase subunit L; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 613 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 5e-14
Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 50/336 (14%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F+ ++++ +NLL +YLG E + L +LI + + AA+K F++ + F+
Sbjct: 122 LFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFL 181
Query: 647 LYGISILYGITGTLELQSIFNVI-KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+ + ILY GTL + + + ++L + L+++ G K P W+ D
Sbjct: 182 AFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLAD 241
Query: 706 VYQGASIIITLLLSTTPKLSL-----------FVIIYRLLIKCLLPLVINWQKILLILAI 754
G TP +L ++I + + P V ++ I+
Sbjct: 242 AMAGP----------TPVSALIHAATMVTAGVYLIARTHGLFLMTPEV---LHLVGIVGA 288
Query: 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIIT 814
+L++ +A+ Q + KR++AYS+++ +G M ++ + D+ +F+++T
Sbjct: 289 VTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV-----------QAWDAAIFHLMT 337
Query: 815 YIF--AI--LGAFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMIFMFSLAGFP 868
+ F A+ L + VI+ E +IF GL + P L ++ +L+ P
Sbjct: 338 HAFFKALLFLASGSVILACH-------HEQNIFKMGGLRKSIPLVYLCFLVGGAALSALP 390
Query: 869 P-TIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
T GF++K I I L++ ++ + + +
Sbjct: 391 LVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTS 426
|
| >3rko_N NADH-quinone oxidoreductase subunit N; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 485 | Back alignment and structure |
|---|
Score = 338 bits (868), Expect = e-105
Identities = 115/386 (29%), Positives = 203/386 (52%), Gaps = 15/386 (3%)
Query: 527 FSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKN- 585
+ + SL G + A+ + + + + F+ + + N
Sbjct: 43 IGLNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK 102
Query: 586 ------IIF-VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFIL 638
++ LG +++ + N+L S++LG+EL+SL L L+ S EA+IKY IL
Sbjct: 103 DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTIL 162
Query: 639 GILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISP 698
+S F+L+G++++Y +G L ++ + +N +L L+IVGL FKL + P
Sbjct: 163 SAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVP 222
Query: 699 FHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLI 758
FH+W PDVYQGA ++ L+T K+++F ++ RL + + + +L I+A S+I
Sbjct: 223 FHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASII 282
Query: 759 IGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA 818
GN+ A++Q N KR++ YSSI+H+G +L ++I+++T ++ ++ Y+ Y+F+
Sbjct: 283 FGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSM------EAVGVYLAGYLFS 336
Query: 819 ILGAFGVIILLKNNTCNK-TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKF 877
LGAFGV+ L+ + D L + GL P A +M + M SLAG P T+GF KF
Sbjct: 337 SLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKF 396
Query: 878 FIFEKIFETQKIWLLLLIIMCSLIGA 903
++ + WL+ +++ S IG
Sbjct: 397 YVLAVGVQAHLWWLVGAVVVGSAIGL 422
|
| >3rko_N NADH-quinone oxidoreductase subunit N; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 485 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 7e-28
Identities = 71/354 (20%), Positives = 147/354 (41%), Gaps = 17/354 (4%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGL-IIGAF---CALDGMLF 292
+DG ++ + L +L + + + F +L + +G A
Sbjct: 69 VDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASL 128
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351
++ E +P+F ++G RS A+IK+ + + S +L M +Y S + +
Sbjct: 129 FLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSG-DLSFV 187
Query: 352 SWHQLSITKIEQIWLFIT----FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML 407
+ + + L + + K+ + P H W PD + AP S LA
Sbjct: 188 ALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASK 247
Query: 408 KLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467
++R L S ++ ++ SII+ +L+A+ Q +IK+L+ YSSI+H+G
Sbjct: 248 IAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLG 307
Query: 468 FVTLGIFML--TKISIQGAIIQMISHALISSAMFISIGFL---YNQMKTRLISNFGGIIN 522
++ + + L ++S++ + + + S F + + Y + ++ G+
Sbjct: 308 YLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFW 367
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSA 576
P + + L+ +P T GFIG+F ++ V+ + L ++ SA
Sbjct: 368 HRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHL--WWLVGAVVVGSA 419
|
| >3rko_N NADH-quinone oxidoreductase subunit N; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} Length = 485 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 2e-21
Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 56/274 (20%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFL-------------------- 41
+N+L LFLG E++ + + L+G+ + + ++ A++K +
Sbjct: 122 ANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQS 181
Query: 42 ----INRIGAMA-----------------------KSAQFPLHTWLPDSMEG-PTPASAL 73
+G K + P H W PD +G P P S
Sbjct: 182 GDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTF 241
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMG-LLGIIQNDIKRIIAYS 132
+ A+ + ++ + A+ ++L I A + G L+ + Q +IKR++ YS
Sbjct: 242 LATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYS 301
Query: 133 TLSQLGYMTVGL-----GVSAYTVSIFHLMTHAF--FKALLFLSAGSIIINMKHNQDIRN 185
++S LGY+ V L G + +L + F A +S S + +
Sbjct: 302 SISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFS 361
Query: 186 MGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
GL+ + PI + +LSL G P GF K
Sbjct: 362 YRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGK 395
|
| >2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} Length = 267 | Back alignment and structure |
|---|
Score = 324 bits (832), Expect = e-102
Identities = 95/251 (37%), Positives = 159/251 (63%), Gaps = 1/251 (0%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A++AARK+ +I + + + +K +FV N++KA+E +I + +YP + + +
Sbjct: 8 AVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITE 67
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+S L + + W+IDPLD TNF P + +SIA++ K + +V+YDP+RN+LFTA
Sbjct: 68 ESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTA 127
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIGT 1103
+G GA LN R+R + ++ ++ T F FK + Y I ++ +C + R G+
Sbjct: 128 TRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRATGS 187
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQ 1163
++L+LAYVA+G++DGFFE GL+PW+ AAG LL+ E+GGI+S+F G NY+ TG+IVAGN
Sbjct: 188 AALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNP 247
Query: 1164 KIFSQIISLIN 1174
++ +++ +
Sbjct: 248 RVVKAMLANMR 258
|
| >3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} PDB: 3luz_A Length = 267 | Back alignment and structure |
|---|
Score = 322 bits (827), Expect = e-102
Identities = 83/251 (33%), Positives = 149/251 (59%), Gaps = 1/251 (0%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
++AA K+ + R E++NL+ K ++V ++ +EKII L P + FL++
Sbjct: 14 MVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLME 73
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+S + ++++ +I+DPLD TNF H P + +SIAL+ + +I VIY+PI ++LFTA
Sbjct: 74 ESEEIIGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTA 133
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIGT 1103
+G GA+ N++R RV+ R ++ D +I T Y ++ + +R GT
Sbjct: 134 ERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLGRPGHGTYLIELRNVMAEVSGIRRFGT 193
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQ 1163
++L+LAYVA+G+ DGF+E L+ W++AAG L++ E+GG +++ +G + +I+AGN+
Sbjct: 194 AALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIAGNE 253
Query: 1164 KIFSQIISLIN 1174
I ++ +
Sbjct: 254 HIRIKLERALK 264
|
| >2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A* Length = 256 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 8e-95
Identities = 60/250 (24%), Positives = 135/250 (54%), Gaps = 9/250 (3%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
+IK RK ++ ++N+ ++ +++ V I++ ++++I + +P + +
Sbjct: 7 SIKLLRKVGHLLMIHWGRVDNVE-KKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAE 65
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+ + + +WIIDP+D NF H P + IS+A + ++ V++ P N+ A
Sbjct: 66 EG---IFEKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYA 122
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTS 1104
+G GA+ N +RIRV++ + + + T I ++ + + +R +G++
Sbjct: 123 EEGSGAFFNGERIRVSENASLEECVGSTGSYVDFTGK-----FIERMEKRTRRIRILGSA 177
Query: 1105 SLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQK 1164
+LN AYV +G++D F + PW+IAAG +++ E+GG++++F G++ ++ + + N
Sbjct: 178 ALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGL 237
Query: 1165 IFSQIISLIN 1174
I +++ ++N
Sbjct: 238 IHDEVVKVVN 247
|
| >2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus} Length = 264 | Back alignment and structure |
|---|
Score = 301 bits (773), Expect = 3e-94
Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 5/251 (1%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A AA ++ +++ EEK ++FV ++K SE+ I +++ +P + + +
Sbjct: 11 AKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEVVGE 70
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+ +E W IDPLD N+ + FP + +S+ L + ++ +Y P + L+
Sbjct: 71 EMG-AEGSGSEYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFDKLYWG 129
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQ-IITKCKNLRNIGT 1103
KG GAY+N KRI+V + A + F ++ + Y IF+ + + ++R G
Sbjct: 130 AKGLGAYVNGKRIKVKDNESLKHAGVVYGFPSRSRRDISIYLNIFKDVFYEVGSMRRPGA 189
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQ 1163
++++L VA G DG E +KPW+I AG +++ E+GG+ + DI+AGN+
Sbjct: 190 AAVDLCMVAEGIFDGMMEFEMKPWDITAGLVILKEAGGVYTLV---GEPFGVSDIIAGNK 246
Query: 1164 KIFSQIISLIN 1174
+ I+ +
Sbjct: 247 ALHDFILQVAK 257
|
| >2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A Length = 273 | Back alignment and structure |
|---|
Score = 296 bits (761), Expect = 2e-92
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 13/258 (5%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFL-- 982
A++ A ++ II + E + + + + V + E +I L +PS+ F+
Sbjct: 8 AVQLALRAGQIIRKALTEEKRVS-TKTSAADLVTETDHLVEDLIISELRERFPSHRFIAE 66
Query: 983 ----IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIR 1038
LT+ WIIDP+D NF H FP +SI ++++ VIY
Sbjct: 67 EAAASGAKCVLTH---SPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 123
Query: 1039 NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDF-SFKNNINSEEYAKIFQ--IITKC 1095
L+T +G GA+ N +R+RV+ ++ AL+ T+ ++ + + + + K
Sbjct: 124 ERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKA 183
Query: 1096 KNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT 1155
+R IG+S+L L ++ASG D +++ GL W++AA +++I E+GGI+ + G L
Sbjct: 184 HGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMA 243
Query: 1156 GDIVAGNQKIFSQIISLI 1173
+VA + + + +I+
Sbjct: 244 CRVVAASTREMAMLIAQA 261
|
| >2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A Length = 277 | Back alignment and structure |
|---|
Score = 293 bits (753), Expect = 2e-91
Identities = 58/253 (22%), Positives = 127/253 (50%), Gaps = 7/253 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFL-- 982
A+ A ++ ++ N+ + + V ++ EK++ + YPS++F+
Sbjct: 12 AVTLAGQAGEVVREALKNEMNIM-VKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGE 70
Query: 983 -IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDL 1041
+ + + WIIDP+D TNF H FP +SI K++ ++Y + + +
Sbjct: 71 ESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKM 130
Query: 1042 FTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEE--YAKIFQIIT-KCKNL 1098
+T KG GA+ N ++++V+ + I +L+ T+ + + I +++ +
Sbjct: 131 YTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGI 190
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158
R +GT++LN+ VA+G D ++E G+ W++A +++ E+GG++ + G L + +
Sbjct: 191 RGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGGPFDLMSRRV 250
Query: 1159 VAGNQKIFSQIIS 1171
+A + K ++ I+
Sbjct: 251 IASSNKTLAERIA 263
|
| >3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus} Length = 283 | Back alignment and structure |
|---|
Score = 285 bits (732), Expect = 3e-88
Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
A +++ + I + + NL E K N V N++KA+E I + TYP++ L
Sbjct: 15 AQGLIQEAGIRIKQLMEQ--NLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLG 72
Query: 984 KKSNYLT-NFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLF 1042
++ + + +W++DP+D NF H + ISI + + +YD + + L+
Sbjct: 73 EEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLY 132
Query: 1043 TAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQ-IITKCKNLRNI 1101
A G GAY + ++ + + ++IG + ++ +IF+ I+ ++ R
Sbjct: 133 HAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTK---PILGEIFKEIVNDSRSARAY 189
Query: 1102 GTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT-GDIVA 1160
G+++L + VA+G L+ + L+PW+ A G +++ E G SN GE + I+
Sbjct: 190 GSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILV 249
Query: 1161 GNQKIFSQIISLI 1173
GN+ + +I +
Sbjct: 250 GNRGLHQEISNDY 262
|
| >3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A Length = 273 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 3e-86
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 12/257 (4%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
++ +I + +E+ E K++ V N++K ++ + L +P + L
Sbjct: 21 ICSWLKQIDNVIPQLIMEMTT---ETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLA 77
Query: 984 K-KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLF 1042
+ KSN + E ++WI+DP+D N YCI +A + + S +YD L+
Sbjct: 78 EEKSNAMITNEINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLY 137
Query: 1043 TAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIG 1102
AI+G GA+ N ++ K+ DA+I + N + + + R +G
Sbjct: 138 KAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMN------LDTVQDLFDASFSYRLVG 191
Query: 1103 TSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK-NYLYTGDIVAG 1161
L+ VA G+ KPW+IAA L ++ G+ ++L +
Sbjct: 192 ACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFIIS 251
Query: 1162 NQKIFSQIISLINLNKN 1178
N+ ++ ++N N
Sbjct: 252 NKACHETVLKILNANGG 268
|
| >1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 Length = 262 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 2e-84
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 23/258 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI I + + + ++K +E +I + + +
Sbjct: 18 AIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELGVN--VVS 75
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
++ + N E+E I+DPLD NF P + +S+A+ +K + +++IY+P+ F
Sbjct: 76 EEVGVIDN-ESEYTVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFE 134
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
I G GA+LN KRI+V K ++ + I+ K R +G
Sbjct: 135 GIPGEGAFLNGKRIKVRKTPDEKPSISFYSRGKGHE-----------IVKHVKRTRTLGA 183
Query: 1104 SSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTG 1156
+L LAY+A G LDG + K ++P +IAAG+++ E+G +I + G+ N
Sbjct: 184 IALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATDRL 243
Query: 1157 DIVAGN-QKIFSQIISLI 1173
D++A N +++ I+SL+
Sbjct: 244 DVIAVNSEELLKTILSLL 261
|
| >2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis} Length = 299 | Back alignment and structure |
|---|
Score = 274 bits (704), Expect = 4e-84
Identities = 56/264 (21%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 925 AIKAA-----RKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSY 979
A +AA R++ + + + + + + V ++ +E+++ L P
Sbjct: 19 AAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGD 78
Query: 980 AFLI----KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYD 1035
L ++ + W++DP+D NF + P Y +SI + + D
Sbjct: 79 PILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVAD 138
Query: 1036 PIRNDLFTAIKGCGAYLNEKR----IRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-Q 1090
+++A G GA+L ++R +R ++++ AL+GT F + E+ A++
Sbjct: 139 VAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCR-EKQAELLAH 197
Query: 1091 IITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK 1150
++ +++R IG+++L+L VA+G+LD ++E G++ W+ AAG+L+ E+G +
Sbjct: 198 VVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARVLLSTPR- 256
Query: 1151 NYLYTGDIVAGNQKIFSQIISLIN 1174
+VA I ++++ +
Sbjct: 257 AGGAGLVVVAAAPGIADELLAALQ 280
|
| >1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* Length = 252 | Back alignment and structure |
|---|
Score = 264 bits (677), Expect = 5e-81
Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 21/258 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
A++ I + +K SE I K L + +
Sbjct: 7 GKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYL--KSLNVNIVS 64
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
++ + N +E +IDP+D NF + P + + + + + + Y+ + +
Sbjct: 65 EELGVIDN-SSEWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYE 123
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
A KG GAYLN ++I+V N + ++ + + K + ++ K K +R G
Sbjct: 124 AYKGKGAYLNGRKIKVKDFNP--NNIVISYYPSKKI-------DLEKLRNKVKRVRIFGA 174
Query: 1104 SSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTG 1156
L + YVA G LD F+ ++ +IA+ ++ E+G +I++ G++ N
Sbjct: 175 FGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRL 234
Query: 1157 DIVAGN-QKIFSQIISLI 1173
+I+ N +++ I+ L+
Sbjct: 235 NIIVANSKEMLDIILDLL 252
|
| >1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 Length = 254 | Back alignment and structure |
|---|
Score = 262 bits (671), Expect = 4e-80
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI R I + ++K +E II + + +
Sbjct: 10 AIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGVN--VVS 67
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
++ + ++ ++DPLD NF + P + +S+A+ +K ++ IY+PI L+
Sbjct: 68 EEIGRIDQ-GSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIVERLYE 126
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
I G G+YLN ++I+V + + T II K K R +G
Sbjct: 127 GIPGKGSYLNGEKIKVRELAEKPSISFYTKGKGTK------------IIDKVKRTRTLGA 174
Query: 1104 SSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTG 1156
+L LAY+A G LD + L+P +IAAG ++ E+G I+ + G+ +
Sbjct: 175 IALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKV 234
Query: 1157 DIVAGN-QKIFSQIISLIN 1174
+I+A N +++ I+ I
Sbjct: 235 NIIAANNEELLETILRSIE 253
|
| >1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* Length = 252 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 4e-74
Identities = 53/267 (19%), Positives = 104/267 (38%), Gaps = 37/267 (13%)
Query: 924 EAIKAARKSALIINRGSLEL----ENLRFEEKKYENFVFNINKASEKIITKILFNTYPSY 979
+A++ +R+ A + + + K ++ +E +IL
Sbjct: 5 DALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEIL--RKERV 62
Query: 980 AFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHS---VIYDP 1036
+ ++S L + +DPLD N + P Y +S+ ++ + +Y+
Sbjct: 63 TVVTEESGVLGE--GDVFVALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVYNL 120
Query: 1037 IRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK 1096
D + A GAY N +RI V+ ++ I K K
Sbjct: 121 ATGDEYYA-DSSGAYRNGERIEVSDAEELYCNAIIYYPDRKF---------------PFK 164
Query: 1097 NLRNIGTSSLNLAYVASGKLDGFFE----KGLKPWNIAAGSLLIIESGGIISNFKGEK-- 1150
+R G+++ L + A G D F + K L+ ++ AAG + ++GG ++ GE
Sbjct: 165 RMRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLG 224
Query: 1151 ----NYLYTGDIVAGNQKIFSQIISLI 1173
+ +IVA N+K+ +++ LI
Sbjct: 225 NKKFDMQERLNIVAANEKLHPKLLELI 251
|
| >1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* Length = 357 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 1e-27
Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 42/215 (19%)
Query: 997 IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI----------------RND 1040
W +DP+D F Q+ + +AL + I P
Sbjct: 138 FWCLDPIDGTKGFLRG-EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGY 196
Query: 1041 LFTAIKGCGAYLNE-------KRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT 1093
+F A++G GA+ + +I V D + ++ + +E I +
Sbjct: 197 IFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHS-SHDEQTAIKNKL- 254
Query: 1094 KCKNLRNIGTSSLNLAYVASGKLDGFF------EKGLKPWNIAAGSLLIIESGGIISNFK 1147
++ S +A G D + K W+ AAG++++ E+GGI ++
Sbjct: 255 NISKSLHLD-SQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAM 313
Query: 1148 -------GEKNYLYTGDIVA--GNQKIFSQIISLI 1173
G L T ++A G +++ ++S
Sbjct: 314 EDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTS 348
|
| >1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* Length = 308 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 35/257 (13%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFL- 982
A A+K+ I+ R + +L +K ++ + I L +P +
Sbjct: 15 AYSIAQKAGTIV-RCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIG 73
Query: 983 -------------------------IKKSNYLTNFENENIWIIDPLDNITNFSHNF-PQY 1016
S Y E + + +DP+D ++
Sbjct: 74 EEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNV 133
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDF-- 1074
+ I + + + +I P N G + ++ +A G
Sbjct: 134 TVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHIIT 193
Query: 1075 SFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDG--FFEKGLKPWNIAAG 1132
+ +++ N I + N+ +G + + + GK F G K W+ A
Sbjct: 194 TTRSHSNKLVTDCIAAM--NPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAP 251
Query: 1133 SLLIIESGGIISNFKGE 1149
+++ GG +++ G
Sbjct: 252 EVILHAVGGKLTDIHGN 268
|
| >3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Length = 292 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 34/260 (13%)
Query: 921 YIVEAIKAARK-SALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNT-YP- 977
+ AI AA K I++ + E K + + ++ + + I IL T +P
Sbjct: 23 NAMAAIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNETPFPV 82
Query: 978 ----SYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVI 1033
WI+DPLD F ++ ++IAL Q VI
Sbjct: 83 LSEEGKHMDYAVRRGWDTL-----WIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVI 137
Query: 1034 YDPIRNDLFTAIKGCGAYLNE-----------KRIRVNKRNKINDALIGTDFSF---KNN 1079
Y P++ +L+ A++G GAY + + K ++ A F +++
Sbjct: 138 YVPVKKELYFAVEGTGAYKCSGIVGLEDEGVTLQQMIEKSERMPLADARDHFIAVASRSH 197
Query: 1080 INSEEYAKIFQIITKCKN--LRNIGTSSLNLAYVASGKLDGFFEKGLKP---WNIAAGSL 1134
+ E I + K N L + G SS+ + VA GK D + P W+ AAG
Sbjct: 198 LTPETETYIADLKKKHGNVELISSG-SSIKICLVAEGKADVYPRFA--PTMEWDTAAGHA 254
Query: 1135 LIIESGGIISNFKGEKNYLY 1154
+ +G + E+ Y
Sbjct: 255 IARAAGMEVYQAGKEEPLRY 274
|
| >1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 Length = 400 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 43/283 (15%), Positives = 74/283 (26%), Gaps = 44/283 (15%)
Query: 908 IIKDCPGVGSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKI 967
+ PG+G I+ E+ + I + L E + V N NK + +
Sbjct: 65 MENKFPGLG-KKIFGEESNELTNDLGEKI---IMRLGPTEEETVALLSKVLNGNKLASEA 120
Query: 968 ITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLD--------------NITNFSHNF 1013
+ K++ + + IW+ DP+D N F
Sbjct: 121 LAKVVHQDVFFSDPALDSVEINIPQDILGIWV-DPIDSTYQYIKGSADITPNQGIFPSGL 179
Query: 1014 PQY--CISIALKQKKQITHSVIYDPIRNDLFT----------AIKGCGAYLNEKRIRVNK 1061
I + Q VI P + + G ++ V+
Sbjct: 180 QCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVST 239
Query: 1062 RNKINDALIGTDFSFKNNIN----------SEEYAKIFQIITKCKNLRNIGTSSLNLAYV 1111
R+ GT E + + R G + V
Sbjct: 240 RSNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAG-AGYKSLCV 298
Query: 1112 ASGKLDG--FFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNY 1152
G D F E W+ A ++ GG + + K
Sbjct: 299 ILGLADIYIFSEDTTFKWDSCAAHAILRAMGGGMVDLKECLER 341
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 1e-05
Identities = 89/672 (13%), Positives = 190/672 (28%), Gaps = 269/672 (40%)
Query: 437 SLISIIYISLIAMVQIDIKKLIAYS-SIAHMGFVTLGIFMLTKISIQGAIIQMISHALIS 495
S+++ +YI + D + Y+ S + ++ A++++ +
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-----------YLKLRQALLELRPAKNV- 153
Query: 496 SAMFISIGFLYNQM----KTRLIS---NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFI 548
+ + KT + + + F +F++ +L NC+ P
Sbjct: 154 --------LIDG-VLGSGKTWVALDVCLSYKVQCKMD-FKIFWL--NLKNCNSPE----- 196
Query: 549 GEFMIILSA----VKFNFCIGVLTSTA--------------LIFSAAYSLCL-------S 583
+ +L + N+ S+ L+ S Y CL +
Sbjct: 197 -TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 584 KNII--FVLGQMIMISGNNLLSIYLGLELMSLTLC-VLIASQKNNIFS--SEAAIKYFIL 638
F L C +L+ ++ + S A + L
Sbjct: 256 AKAWNAFNLS------------------------CKILLTTRFKQVTDFLSAATTTHISL 291
Query: 639 GILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALS--------LLLIIVGL 690
S E++S+ L ++C L L I+
Sbjct: 292 DHHSMTL------------TPDEVKSLL----LKYLDCRPQDLPREVLTTNPRRLSIIAE 335
Query: 691 SFKLGISPFHMWV-PDVYQGASIIITLLLSTTP--------KLSLF---VIIYRLLIKCL 738
S + G++ + W + + +II + L P +LS+F I
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-------- 387
Query: 739 LP---LVINWQKIL-----LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSII 790
P L + W ++ +++ S + + + I+ SI ++ + +
Sbjct: 388 -PTILLSLIWFDVIKSDVMVVVNKLH----KYSLVEKQPKESTISIPSI-YL-ELKVKLE 440
Query: 791 SIKTSHNNLI-------IFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIF 843
+ H +++ F+S D Y+ Y ++
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS------------------------H 476
Query: 844 IGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
IG H +N I + +F +F L +
Sbjct: 477 IGHHLKN--------------------IEHPERMTLFRMVF-------LDF----RFLEQ 505
Query: 904 KGGRIIKDCPGVGSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKA 963
K I D + G + N + K Y+ ++ + +
Sbjct: 506 K---IRHDSTAWNASG----------------------SILNTLQQLKFYKPYICDNDPK 540
Query: 964 SEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALK 1023
E+++ IL ++L E EN+ I ++ + IAL
Sbjct: 541 YERLVNAIL--------------DFLPKIE-ENL-ICSKYTDL-----------LRIALM 573
Query: 1024 QKKQITHSVIYD 1035
+ I++
Sbjct: 574 AE----DEAIFE 581
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1178 | |||
| 3rko_M | 509 | NADH-quinone oxidoreductase subunit M; complex I, | 100.0 | |
| 3rko_N | 485 | NADH-quinone oxidoreductase subunit N; complex I, | 100.0 | |
| 3rko_L | 613 | NADH-quinone oxidoreductase subunit L; complex I, | 100.0 | |
| 3lv0_A | 267 | Extragenic suppressor protein SUHB; niaid, seattle | 100.0 | |
| 3ryd_A | 273 | Inositol monophosphatase family protein; impase fo | 100.0 | |
| 3t0j_A | 283 | Impase II, inositol monophosphatase family protein | 100.0 | |
| 2pcr_A | 264 | Inositol-1-monophosphatase; bipolar disorder, stru | 100.0 | |
| 2p3n_A | 256 | Inositol-1-monophosphatase; tetramer, hydrolase; 2 | 100.0 | |
| 2qfl_A | 267 | Inositol-1-monophosphatase; impase extragenic supp | 100.0 | |
| 2bji_A | 277 | Inositol-1(OR 4)-monophosphatase; hydrolase, aspar | 100.0 | |
| 2fvz_A | 273 | Inositol monophosphatase 2; inositol metabolism, s | 100.0 | |
| 2q74_A | 299 | Inositol-1-monophosphatase; alpha-beta-alpha-beta- | 100.0 | |
| 1g0h_A | 252 | Inositol monophosphatase; homodimer, complexed wit | 100.0 | |
| 3rko_N | 485 | NADH-quinone oxidoreductase subunit N; complex I, | 100.0 | |
| 1vdw_A | 254 | Hypothetical protein PH1897; homodimer, riken stru | 100.0 | |
| 1lbv_A | 252 | Fbpase/impase, fructose 1,6-bisphosphatase/inosito | 100.0 | |
| 1xi6_A | 262 | Extragenic suppressor; structural genomics, southe | 100.0 | |
| 3b8b_A | 292 | CYSQ, sulfite synthesis pathway protein; 3'-phosph | 100.0 | |
| 1ka1_A | 357 | Halotolerance protein HAL2; nucleotidase, salt tol | 100.0 | |
| 1jp4_A | 308 | 3'(2'),5'-bisphosphate nucleotidase; protein-produ | 100.0 | |
| 3rko_M | 509 | NADH-quinone oxidoreductase subunit M; complex I, | 100.0 | |
| 3rko_L | 613 | NADH-quinone oxidoreductase subunit L; complex I, | 100.0 | |
| 1inp_A | 400 | Inositol polyphosphate 1-phosphatase; hydrolase(ph | 100.0 | |
| 1nuw_A | 337 | Fructose-1,6-bisphosphatase; allosteric enzymes, g | 100.0 | |
| 2gq1_A | 332 | Fructose-1,6-bisphosphatase; allosteric activator | 99.98 | |
| 2fhy_A | 374 | Fructose-1,6-bisphosphatase 1; allosteric inhibito | 99.91 | |
| 1dcu_A | 357 | Fructose-1,6-bisphosphatase; chloroplast, photosyn | 99.82 | |
| 3uks_A | 347 | Sedoheptulose-1,7 bisphosphatase, putative; struct | 99.46 | |
| 3big_A | 338 | Fructose-1,6-bisphosphatase class II GLPX; carbohy | 94.74 | |
| 3roj_A | 379 | D-fructose 1,6-bisphosphatase class 2/sedoheptulo | 92.16 |
| >3rko_M NADH-quinone oxidoreductase subunit M; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-61 Score=577.95 Aligned_cols=370 Identities=39% Similarity=0.721 Sum_probs=337.9
Q ss_pred ccchhcccccchhhhccchhHhHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy5224 221 KKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEAT 299 (1178)
Q Consensus 221 ~~~~w~~~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~ 299 (1178)
+..+|.+++++++.+++|++|.++.++++++++++.+++.+ .+++.++|+.+++++..++++++.|+|++++|++||++
T Consensus 67 ~~~~W~~~~gi~~~l~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~f~~~~l~~~~~~~~~~~s~dl~~~~v~~E~~ 146 (509)
T 3rko_M 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMM 146 (509)
T ss_dssp EEEEEEGGGTEEEEEEECHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHHHHHHHHHHHHHHBCBHHHHHHHHHHH
T ss_pred eeeccccccCceeeeeecHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999954 34556789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC-----cchHHHHHHHHHHHHhHHHHHHHHHHH----HHHhhhhH--hhHHhhhhhhhhhHHHHHHH
Q psy5224 300 LIPIFIIIGTWGGS-----NRSYAAIKFFLYTLMGSLLMLISMIYL----YYISNKSF--NILSWHQLSITKIEQIWLFI 368 (1178)
Q Consensus 300 ~i~~~~Li~~~~~~-----~~~~aa~ky~i~~~~gs~~~L~~~~~~----~~~~~~s~--~~~~~~~~~~~~~~~~~~~~ 368 (1178)
++++|.|++.|+++ +|.||++||++++.+||.++++|+..+ |..+| ++ |+.++.+...+...+.+...
T Consensus 147 ~i~s~~LI~~wg~~~~~~~~~~~Aa~ky~l~~~~gs~~lL~gi~~l~~~~~~~~G-~~~~~~~~l~~~~~~~~~~~~~~~ 225 (509)
T 3rko_M 147 LVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG-VWTFNYEELLNTPMSSGVEYLLML 225 (509)
T ss_dssp HHHHHHHHHHHCCCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCBHHHHHHCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-cchhhHHHHHhhccCchHHHHHHH
Confidence 99999999996643 578999999999999999999999988 44455 44 66666543333444556667
Q ss_pred HHHHHHHhhcCCCcccccccCccCCCChHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 369 TFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448 (1178)
Q Consensus 369 ~~~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~a 448 (1178)
++++|+++|+|++|||.|+||+|+|+|+|+++++++++.|+|.|+++|+..+.+++....+.+++.++|++|+++|++.|
T Consensus 226 ~~~~g~~~K~~~~PfH~WLP~a~~~aPt~vsalla~~l~K~g~y~llR~~~~~~~~~~~~~~~~l~~lg~~t~l~g~~~a 305 (509)
T 3rko_M 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 (509)
T ss_dssp HHHHHHHHHTTCSSTTTHHHHHHHHSCHHHHHHHHHTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999998888887766777889999999999999999
Q ss_pred HhccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhcccchhhhhHHHH
Q psy5224 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528 (1178)
Q Consensus 449 l~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~~~~~~l~~~~gl~~~~p~~~ 528 (1178)
++|+|+||++|||||+|+||++++++.++..+..++++|+++|++.|+++|+++|.+++++|+|++++++|+.+++|.++
T Consensus 306 l~Q~dlKrllAYSSIsh~G~~l~~l~~~~~~~~~~a~~~~i~h~l~k~~LFl~~g~i~~~~~~~~i~~~~Gl~~~~P~~~ 385 (509)
T 3rko_M 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP 385 (509)
T ss_dssp HTCSBHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCBGGGCCSGGGTCSSHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHhCCCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 529 ~~~~i~~ls~~GlPp~~gF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
..+.++.+|++|+||+.||++|++++.++.+.+.+..++..+++++++.|++|+++++++|+.
T Consensus 386 ~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~~~~~~~ls~~y~lr~~~~~f~g~~ 448 (509)
T 3rko_M 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKA 448 (509)
T ss_dssp HHHHHHHHHHSCCTTSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999998888778889999999999999999999874
|
| >3rko_N NADH-quinone oxidoreductase subunit N; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=527.79 Aligned_cols=357 Identities=20% Similarity=0.307 Sum_probs=316.6
Q ss_pred hhhccchhHhHHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 233 YFLGIDGLSLWFIPLTAFITLIIILISLDI----KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIG 308 (1178)
Q Consensus 233 ~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~E~~~i~~~~Li~ 308 (1178)
..+.+|++|..+..++.+++.++.+++.++ +++.++||.++++...|+++++.|+|++++|++||++++++|.|+.
T Consensus 65 ~~~~~D~~s~~~~~l~~~~~~~~~l~s~~y~~~~~~~~~~f~~lll~~~~g~~~~~~s~dl~~~~v~~El~~l~~~~Li~ 144 (485)
T 3rko_N 65 PLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVG 144 (485)
T ss_dssp TTBCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHTBCSSHHHHHHHHHTTHHHHHHHH
T ss_pred ceeEEChHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999999999999443 2235689999999999999999999999999999999999999999
Q ss_pred hcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhh----hhhhHHHHHHHHHHHHHHhhcCCCcc
Q psy5224 309 TWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLS----ITKIEQIWLFITFFIAFAIKIPIWPM 383 (1178)
Q Consensus 309 ~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~K~~~~Pf 383 (1178)
.++ ++++.||++||++++.+||.++++|+.++|..+| ++|+.++.+.. .++........++++|+++|+|++||
T Consensus 145 ~~~~~~~~~eAa~ky~l~~~~gs~~lL~gi~~ly~~~g-s~~~~~i~~~~~~~~~~~~~~~~~~~li~~g~~~K~~~~Pf 223 (485)
T 3rko_N 145 YAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSG-DLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPF 223 (485)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CCSSSCSCCC-------CHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHhcccccchhHHHHHHHHHHHHHHhcCcCcc
Confidence 984 5677899999999999999999999999998888 88887664321 11122234456788999999999999
Q ss_pred cccccCccCCCChHHHHHHHHHHHHHHHHHH-HHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhc
Q psy5224 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGL-LRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462 (1178)
Q Consensus 384 H~Wlp~~~~~ap~~~s~~ls~~~~k~g~~~l-~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al~q~d~krllAySs 462 (1178)
|.|+||+|++||+|++++++++ .|+|.|++ .|+.....+.....+..++.++|++|+++|++.|++|+|+||++||||
T Consensus 224 H~WlPda~~~APtpvsall~~~-~K~~~~~ll~R~~~~~~~~~~~~~~~~l~~l~~~s~~~g~l~al~Q~dlKrlLAYSS 302 (485)
T 3rko_N 224 HLWTPDVYQGAPAPVSTFLATA-SKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSS 302 (485)
T ss_dssp CTHHHHHHHHSCHHHHHHHHTH-HHHHHHHHHHHHHHHCGGGGCSHHHHHHHHHHHHHHHHHHHHHHTCCBHHHHHHHHH
T ss_pred ceecchhhcCCChHHHHHHHHH-HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 9999999999999999999986 89999984 898766555444566788999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhcccchhcccchhhhhHHHHHHHHHHHHh
Q psy5224 463 IAHMGFVTLGIFMLT--KISIQGAIIQMISHALISSAMFISIGFLY---NQMKTRLISNFGGIINVIPHFSVFFIIFSLA 537 (1178)
Q Consensus 463 i~~~G~i~~~~~~~~--~~~~~~~~~~~~~h~l~~~~lF~~~g~~~---~~~~~~~l~~~~gl~~~~p~~~~~~~i~~ls 537 (1178)
|+|+||+++++..++ ..+..++.+|+++|+++|.++|.+++.+. ++.|+|++++++|+.+++|.++..+.++.+|
T Consensus 303 Ish~G~~l~~l~~~~~~~~~~~~~~~y~~~~~~~~~~lF~~~~~~~~~~~~~~~~~i~~~~Gl~~~~P~~~~~~~i~~ls 382 (485)
T 3rko_N 303 ISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLS 382 (485)
T ss_dssp HHHHHHHHHHHHTSSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSCCCBGGGCSSCTTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcCcHHHHhChHhhChHHHHHHHHHHHH
Confidence 999999999999988 88999999999999999999999999884 5678999999999999999999999999999
Q ss_pred hcCCCCCcccchHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy5224 538 NCSLPGTSGFIGEFMIILSAVKFNF-CIGVLTSTALIFSAAYSLCLSKNIIFVLG 591 (1178)
Q Consensus 538 ~~GlPp~~gF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~y~l~~~~~~~~g~~ 591 (1178)
++|+||+.||++|+++++++.+.+. +..++.+++++++++||+|+.++++++++
T Consensus 383 l~GlPp~~GF~~K~~i~~~~~~~~~~~l~~~~~l~s~is~~yylri~~~~f~~~~ 437 (485)
T 3rko_N 383 LAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAP 437 (485)
T ss_dssp TTTCTTSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HhcccccchHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999998874 55677899999999999999999998765
|
| >3rko_L NADH-quinone oxidoreductase subunit L; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-54 Score=526.99 Aligned_cols=364 Identities=22% Similarity=0.357 Sum_probs=317.7
Q ss_pred cchhcc--cccchhhhccchhHhHHHHHHHHHHHHHHHhhhhh---hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy5224 222 KKIWID--YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFF 296 (1178)
Q Consensus 222 ~~~w~~--~~~i~~~l~~D~ls~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~~~~~~s~dl~~~~~~~ 296 (1178)
..+|.+ .+++++.+++|++|..+..++++++.++.+|+.++ +++.++|+.+++++..++++++.|+|++.+|++|
T Consensus 64 ~~~w~~~~~~~~~~~~~~D~lS~~~~~l~~~v~~~v~~ys~~ym~~~~~~~~f~~~l~lf~~~ml~l~~s~nl~~~~i~~ 143 (613)
T 3rko_L 64 LWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGW 143 (613)
T ss_dssp EEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHHHHHTBSBSHHHHHHH
T ss_pred eeehhhcCCcCeeEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 346875 57788889999999999999999999999998433 3345688888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhHhhHHhhhhhh-----hhhHHHHHHHHH
Q psy5224 297 EATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSI-----TKIEQIWLFITF 370 (1178)
Q Consensus 297 E~~~i~~~~Li~~~~-~~~~~~aa~ky~i~~~~gs~~~L~~~~~~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~ 370 (1178)
|.+++++|.|++.|+ ++++.+|++||++++.+||.++++|+..+|..+| ++|+.++.+... +.....+...++
T Consensus 144 E~~~l~sylLI~~~~~~~~~~~Aa~kyfl~~~igs~~lL~gi~~l~~~~g-s~~~~~l~~~~~~~~~~~~~~~~~~~~ll 222 (613)
T 3rko_L 144 EGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELG-TLNFREMVELAPAHFADGNNMLMWATLML 222 (613)
T ss_dssp HHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCBHHHHHHHHHHHCTTCSSSHHHHHHHH
T ss_pred HHHHHHHhhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHHHHHhhhcccccchHHHHHHHHH
Confidence 999999999999886 5578899999999999999999999999998888 888877654311 112345667778
Q ss_pred HHHHHhhcCCCcccccccCccCCCChHHHHHH-HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5224 371 FIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM 449 (1178)
Q Consensus 371 ~~g~~~K~~~~PfH~Wlp~~~~~ap~~~s~~l-s~~~~k~g~~~l~r~~~~~~~~~~~~~~~~l~~~~~~s~~~g~~~al 449 (1178)
++|+++|+|++|||.|+||+| |+|+|+++++ +++++|+|+|+++|+. +.++.. .....++.++|++|+++|++.|+
T Consensus 223 ~~g~~~K~a~~PfH~WLPdA~-e~PtpvSali~a~~~v~aGvy~l~R~~-~~~~~~-~~~~~~l~~lg~~t~l~gal~al 299 (613)
T 3rko_L 223 LGGAVGKSAQLPLQTWLADAM-AGPTPVSALIHAATMVTAGVYLIARTH-GLFLMT-PEVLHLVGIVGAVTLLLAGFAAL 299 (613)
T ss_dssp HHHHHHHHTCTTSTTHHHHHT-TSCHHHHHHHHHTTHHHHHHHHHHHTH-HHHHTS-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcccccHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999 5799999865 7899999999999975 333322 23456788899999999999999
Q ss_pred hccchhHHHHHhchhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccchhcccchhhhhHHHH
Q psy5224 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPHFS 528 (1178)
Q Consensus 450 ~q~d~krllAySsi~~~G~i~~~~~~~~~~~~~~~~~~~~~h~l~~~~lF~~~g~~~~~-~~~~~l~~~~gl~~~~p~~~ 528 (1178)
+|+|+||++|||||+|+||++++++.+ +..++++|+++|++.|+.+|+++|.+.++ .++|++++++|+.+++|.++
T Consensus 300 ~Q~DiKrllAYSSisqmG~m~~~l~~~---~~~~a~~~l~~Ha~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~ 376 (613)
T 3rko_L 300 VQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVY 376 (613)
T ss_dssp TCSBHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCBSTTCCCCTTTCHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcccHHHhCCccccCcHHH
Confidence 999999999999999999999999876 45789999999999999999999987655 57999999999999999999
Q ss_pred HHHHHHHHhhcCCCC-CcccchHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy5224 529 VFFIIFSLANCSLPG-TSGFIGEFMIILSAVKFNFC-IGVLTSTALIFSAAYSLCLSKNIIFVLGQ 592 (1178)
Q Consensus 529 ~~~~i~~ls~~GlPp-~~gF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~y~l~~~~~~~~g~~~ 592 (1178)
.++.++.+|++|+|| ++||++|+.+++++.+.+.+ ..++.++++++++.|++|++++.++|+..
T Consensus 377 ~~~~i~~lsl~GlPp~~~GF~sK~~il~~~~~~~~~~~~~~~~~~s~lt~~Y~lrl~~~~f~g~~~ 442 (613)
T 3rko_L 377 LCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQ 442 (613)
T ss_dssp HHHHHHHHHHHTCSSSBHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHhCCCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHhhhheeeeecCCCC
Confidence 999999999999999 99999999999999988754 56777899999999999999999998753
|
| >3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} SCOP: e.7.1.0 PDB: 3luz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-53 Score=466.74 Aligned_cols=260 Identities=32% Similarity=0.588 Sum_probs=233.6
Q ss_pred CccccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCcc
Q psy5224 917 SPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENEN 996 (1178)
Q Consensus 917 ~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~ 996 (1178)
..+++++.+++++++|++.+++.+++.+..++++|+++|+||++|+++|+.|++.|++.+|++.|+|||++...+.++++
T Consensus 6 ~~~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~v~~K~~~d~VT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~ 85 (267)
T 3lv0_A 6 PQSAVMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEIIGEDSQH 85 (267)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTGGGSCEEEEETTEEEEHHHHHHHHHHHHHHHHHCTTSEEEETTSCCBCCSSTTE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccccceeeecCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCCCCCCCCC
Confidence 35678999999999999999998876667888999999999999999999999999999999999999988754556789
Q ss_pred EEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 997 IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 997 ~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
+|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+||+|++++++++++++++.++.++
T Consensus 86 ~WiIDPIDGT~nF~~g~p~f~vsIAl~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~ng~~i~vs~~~~l~~~~v~~~~~~ 165 (267)
T 3lv0_A 86 RFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPH 165 (267)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCCCCSGGGCEEEECCCC
T ss_pred EEEEecCCChHHHHhCCCceEEEEEEEECCEEEEEEEecCCCccEEEEECCccccCCCeecccCCCCChhhcEEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred CCCCCh-HHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCC
Q psy5224 1077 KNNINS-EEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT 1155 (1178)
Q Consensus 1077 ~~~~~~-~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~ 1155 (1178)
...... ...+.+.+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|....+
T Consensus 166 ~~~~~~~~~~~~~~~l~~~~~~~r~~Gsaal~l~~vA~G~~d~y~~~~~~~WD~AAg~liv~eAGG~vtd~~G~~~~~~~ 245 (267)
T 3lv0_A 166 LGRPGHGTYLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGGNDIFRK 245 (267)
T ss_dssp C--CCHHHHHHHHHHHHTTCSEEEBCSCSHHHHHHHHTTSSSEEEESSCCHHHHHHHHHHHHHTTCEEECTTSSSCHHHH
T ss_pred ccccchHHHHHHHHHHHHhcCeEEEecHHHHHHHHHhCcCccEEEECCCCHHHHHHHHHHHHhCCCEEECCCCCcccCCC
Confidence 443322 3333444566677889999999999999999999999999999999999999999999999999999977667
Q ss_pred CcEEEeChHHHHHHHHHHhhh
Q psy5224 1156 GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1156 ~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
+.++|+|+++|+++++.++++
T Consensus 246 ~~iia~~~~l~~~l~~~l~~~ 266 (267)
T 3lv0_A 246 KNIIAGNEHIRIKLERALKKG 266 (267)
T ss_dssp TCEEEECHHHHHHHHHHHHTT
T ss_pred CEEEEECHHHHHHHHHHHhcc
Confidence 889999999999999999875
|
| >3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=444.54 Aligned_cols=252 Identities=21% Similarity=0.321 Sum_probs=221.7
Q ss_pred CCccccHHHHHHHHHHHHHHHHhccccccceEEEeccC-cccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-CCC
Q psy5224 916 GSPGIYIVEAIKAARKSALIINRGSLELENLRFEEKKY-ENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT-NFE 993 (1178)
Q Consensus 916 ~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~-~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~-~~~ 993 (1178)
.+..++++.+++++++|++.+++.+ ++.+++.|++ +|+||++|+++|+.|++.|++.+|++.|+|||++... +.+
T Consensus 12 ~~~~~~l~~a~~~a~~Ag~~i~~~~---~~~~v~~K~~~~d~VT~aD~~ae~~I~~~L~~~~P~~~ilgEE~~~~~~~~~ 88 (273)
T 3ryd_A 12 KTLQQIDKLICSWLKQIDNVIPQLI---MEMTTETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAMITNE 88 (273)
T ss_dssp CCHHHHHHHHHHHHHHGGGTHHHHH---HTCCC-CTTCSSCCCCHHHHHHHHHHHHHHHHHCTTCEEEETTTCC-CCCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh---hcCceEecCCCCChhHHHHHHHHHHHHHHHHHHCCCCeEEeccCcccccCCC
Confidence 3455789999999999999999887 3467788865 6999999999999999999999999999999987543 334
Q ss_pred CccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEec
Q psy5224 994 NENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTD 1073 (1178)
Q Consensus 994 ~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~ 1073 (1178)
++++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+++||+|++++++++++++++.++
T Consensus 89 ~~~~WiIDPIDGT~nFv~g~p~f~vsIAl~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~ng~~i~~s~~~~l~~a~v~~~ 168 (273)
T 3ryd_A 89 INHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFN 168 (273)
T ss_dssp CSEEEEEEEEECHHHHHHHSCSCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEEECCCCCCCGGGCEEEEC
T ss_pred CCcEEEEecccCHHHHHhCCCCeEEEEEEEECCEEEEEEEEECCCCcEEEEECCceeeECCeEcccCCCCChhhCEEEec
Confidence 68999999999999999999999999999999999999999999999999999999999999999998888888887765
Q ss_pred cCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCC
Q psy5224 1074 FSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYL 1153 (1178)
Q Consensus 1074 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~ 1153 (1178)
+... . ...+.+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|+.+
T Consensus 169 -~~~~--~---~~~~~~l~~~~~~~R~~Gsaal~l~~VA~G~~D~y~~~~~~~WD~AAg~lIv~eAGG~vtd~~G~~~~~ 242 (273)
T 3ryd_A 169 -AQVM--N---LDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDH 242 (273)
T ss_dssp -TTSS--C---HHHHHHHHHHSSEECBCSCHHHHHHHHHTTSCSEEEESSCCHHHHTTHHHHHHHTTCEEEETTSCCCCT
T ss_pred -cccC--C---HHHHHHHHHhcCceEEeCcHHHHHHHHhcceeEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCcccC
Confidence 2221 1 233344556778899999999999999999999999999999999999999999999999999999877
Q ss_pred CC-CcEEEeChHHHHHHHHHHhhh
Q psy5224 1154 YT-GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1154 ~~-~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
++ +.++|+||++|+++++.++++
T Consensus 243 ~~~~~vva~~~~l~~~ll~~l~~~ 266 (273)
T 3ryd_A 243 LKGAPFIISNKACHETVLKILNAN 266 (273)
T ss_dssp TTCCSEEEECTTTHHHHHHHHHST
T ss_pred CCCCEEEEECHHHHHHHHHHHHhc
Confidence 65 459999999999999999874
|
| >3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=446.05 Aligned_cols=252 Identities=23% Similarity=0.425 Sum_probs=216.4
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEeccC-cccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-CCCCccE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKKY-ENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT-NFENENI 997 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~-~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~-~~~~~~~ 997 (1178)
.+.+.+++++++|++.+++.+++ ..++++|++ +|+||++|+++|+.|++.|++.+|++.|+|||++... +.+++++
T Consensus 10 ~~~~~a~~~a~~AG~~i~~~~~~--~~~v~~K~~~~d~VT~aD~~aE~~I~~~L~~~~P~~~ilgEE~~~~~~~~~~~~~ 87 (283)
T 3t0j_A 10 ALYGFAQGLIQEAGIRIKQLMEQ--NLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTV 87 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HCC------CCHHHHHHHHHHHHHHHHHHHHHCTTCEEEETTSTTSSCCTTSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCceEecCCCCChHHHHHHHHHHHHHHHHHHHCCCCEEEeccccccccCCCCCcE
Confidence 47889999999999999987754 467788864 7999999999999999999999999999999987643 3456899
Q ss_pred EEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCC
Q psy5224 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK 1077 (1178)
Q Consensus 998 wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1178)
|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+++||+|+++++.++++++++.++.+..
T Consensus 88 WiIDPIDGT~nFi~g~p~f~VsIAL~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~ng~~i~~s~~~~l~~~~v~~~~~~~ 167 (283)
T 3t0j_A 88 WVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWL 167 (283)
T ss_dssp EEEEEEECHHHHHHHSCSCEEEEEEEETTEEEEEEEEETTTTEEEEEETTSCEEETTEECCCCCCCCSTTCEEECCGGGG
T ss_pred EEEeccCChHHHHcCCCceEEEEEEEECCEEEEEEEeecCCCeEEEEECCceeeECCeecccCCCCChhhcEEEEccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888887764432
Q ss_pred CCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCC-
Q psy5224 1078 NNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTG- 1156 (1178)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~- 1156 (1178)
.. +...+.+.+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|+.++++
T Consensus 168 ~~--~~~~~~~~~l~~~~~~~R~~Gsaal~l~~VA~G~~D~y~~~~l~~WD~AAg~lIv~EAGG~vtd~~G~~~~~~~~~ 245 (283)
T 3t0j_A 168 TK--PILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPN 245 (283)
T ss_dssp GS--TTHHHHHHHHHHHSSEEEBCSCHHHHHHHHHTTSSSEEEEEEECHHHHHHHHHHHHHTTCEEECTTSCCCCTTSCE
T ss_pred cc--hhHHHHHHHHHHhcCceEeeChHHHHHHHHHccceeEEEECCCCHhHHHHHHHHHHHCCCEEECCCCCcccCCCCC
Confidence 22 112233445556778899999999999999999999999988999999999999999999999999999887665
Q ss_pred cEEEeChHHHHHHH-HHHhh
Q psy5224 1157 DIVAGNQKIFSQII-SLINL 1175 (1178)
Q Consensus 1157 ~iva~~~~l~~~l~-~~l~~ 1175 (1178)
.++|+||++|++++ +.+++
T Consensus 246 ~vvA~~~~lh~~ll~~~l~~ 265 (283)
T 3t0j_A 246 SILVGNRGLHQEISNDYLEP 265 (283)
T ss_dssp EEEEECHHHHHHHHHHTTGG
T ss_pred EEEEECHHHHHHHHHHHHhh
Confidence 48899999999999 44554
|
| >2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=445.93 Aligned_cols=254 Identities=27% Similarity=0.466 Sum_probs=207.6
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
+++++.+++++++|++.+++.+++.+..++++|+++|+||++|+++|+.|++.|++.+|++.|+|||++...+ +++++|
T Consensus 5 ~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~v~~K~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~-~~~~~W 83 (264)
T 2pcr_A 5 KKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEVVGEEMGAEGS-GSEYRW 83 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC---------------CHHHHHHHHHHHHHHHHHCTTSEEECC---------CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccceeecCCCCchhHHHHHHHHHHHHHHHHHCCCCEEEecCCCCCCC-CCCcEE
Confidence 3578999999999999999988654457788899999999999999999999999999999999999875333 567999
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCC-
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK- 1077 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~- 1077 (1178)
+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+++||+|+++++.++++++.+.++.++.
T Consensus 84 iIDPIDGT~nF~~g~p~~~vsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~i~~s~~~~l~~~~v~~~~~~~~ 163 (264)
T 2pcr_A 84 FIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFDKLYWGAKGLGAYVNGKRIKVKDNESLKHAGVVYGFPSRS 163 (264)
T ss_dssp EEEEEETHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEEECCCCCSCGGGCEEEEECCSSC
T ss_pred EEecccChHHHhcCCCCeEEEEEEEECCEEEEEEEecCCCCCEEEEECCccccCCCEEecCCCCCChhheEEEEcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998888888888886654
Q ss_pred CCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCc
Q psy5224 1078 NNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD 1157 (1178)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~ 1157 (1178)
....+.....+.+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++ .+|+| ++++.
T Consensus 164 ~~~~~~~~~~~~~l~~~~~~~r~~Gsaal~~~~vA~G~~d~y~~~~~~~WD~AAg~liv~eAGG~v~-~~G~~--~~~~~ 240 (264)
T 2pcr_A 164 RRDISIYLNIFKDVFYEVGSMRRPGAAAVDLCMVAEGIFDGMMEFEMKPWDITAGLVILKEAGGVYT-LVGEP--FGVSD 240 (264)
T ss_dssp SSCHHHHHHHHHHHHHHSSEEEBCSCHHHHHHHHHTTSSSEEEEEEECHHHHHHHHHHHHHTTCEEE-EEECT--TSSEE
T ss_pred ccchhHHHHHHHHHHHHhCceecchHHHHHHHHHHhCCcCEEEECCCCHHHHHHHHHHHHhCCCEEE-ecCCc--CCCCe
Confidence 2211222233344445577899999999999999999999999988999999999999999999999 99999 46678
Q ss_pred EEEeChHHHHHHHHHHhhh
Q psy5224 1158 IVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1158 iva~~~~l~~~l~~~l~~~ 1176 (1178)
++|+|+++|+++++.+++.
T Consensus 241 iia~~~~l~~~l~~~l~~~ 259 (264)
T 2pcr_A 241 IIAGNKALHDFILQVAKKY 259 (264)
T ss_dssp EEEESHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHh
Confidence 9999999999999999874
|
| >2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=438.51 Aligned_cols=247 Identities=25% Similarity=0.469 Sum_probs=220.5
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEeccCc-ccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKKYE-NFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~-d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
++++.+++++++|++.+++.+++ ..+++.|+++ |+||++|+++|+.|++.|++.+|++.|+|||++.. +++++|
T Consensus 2 ~~l~~a~~~a~~Ag~~i~~~~~~--~~~v~~K~~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~---~~~~~W 76 (256)
T 2p3n_A 2 DRLDFSIKLLRKVGHLLMIHWGR--VDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEEGIFE---KGDRLW 76 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC--CCCCEESSSSSSEECHHHHHHHHHHHHHHHHHSTTCEEEESSSCBC---CCSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc--ccceeecCCCCCchhHHHHHHHHHHHHHHHHHCCCCEEEeCCcCCC---CCCCEE
Confidence 36788999999999999998754 2566778776 99999999999999999999999999999998753 567899
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+||+|+++++.++++++.+.++.+.
T Consensus 77 iIDPIDGT~nF~~g~p~~~vsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~i~v~~~~~l~~~~v~~~~~~-- 154 (256)
T 2p3n_A 77 IIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYV-- 154 (256)
T ss_dssp EEEEEETHHHHHHTCSCCEEEEEEEETTEEEEEEEEEGGGTEEEEEETTTEEEETTEECCCCCCCCGGGCEEEECCCS--
T ss_pred EEeCccCHHHHHhCCCCeEEEEEEEECCEEEEEEEEecCCCCEEEEECCeeeeECCEEecCCCCCCHHHcEEEeccCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999888888888877531
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCcE
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~i 1158 (1178)
+...+...+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|+.+.++.+
T Consensus 155 ---~~~~~~~~~l~~~~~~~r~~Gsaal~l~~vA~G~~d~y~~~~~~~WD~aAg~liv~eAGG~v~d~~G~~~~~~~~~~ 231 (256)
T 2p3n_A 155 ---DFTGKFIERMEKRTRRIRILGSAALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNF 231 (256)
T ss_dssp ---SHHHHHHHHHHHHSSEEEBCSCHHHHHHHHHTTSCSEEEEESCCHHHHHHHHHHHHHTTCEEECTTSSBCCTTCSEE
T ss_pred ---hhHHHHHHHHHHhCCceEecChHHHHHHHHHCCCCcEEEECCCCHHHHHHHHHHHHhCCCEEECCCCCcCccCCCeE
Confidence 12233344455567789999999999999999999999999999999999999999999999999999986655588
Q ss_pred EEeChHHHHHHHHHHhhh
Q psy5224 1159 VAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1159 va~~~~l~~~l~~~l~~~ 1176 (1178)
+|+|+++|+++++.+++.
T Consensus 232 ia~~~~l~~~l~~~l~~~ 249 (256)
T 2p3n_A 232 IFSNGLIHDEVVKVVNEV 249 (256)
T ss_dssp EEECSSSHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHh
Confidence 899999999999998763
|
| >2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=439.37 Aligned_cols=256 Identities=36% Similarity=0.697 Sum_probs=226.2
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWI 999 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wv 999 (1178)
++++.+++++++|++.+++.+++....++++|+++|+||++|+++|+.|++.|++.+|++.|+|||++.....+++++|+
T Consensus 3 ~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~k~~~d~vT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~~Wi 82 (267)
T 2qfl_A 3 PMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWV 82 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTTCCCCSSSCCHHHHHHHHHHHHHHHHHHHHHCTTEEEEETTTEEECCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceeeecCCCCchHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCCCCCCCCCEEE
Confidence 46889999999999999998865556777889999999999999999999999999999999999987544445678999
Q ss_pred EeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCC
Q psy5224 1000 IDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNN 1079 (1178)
Q Consensus 1000 IDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1178)
|||||||+||++|.|.|||+||+.++|+|++||||+|.++|+|+|.+|+|+|+||+|+++++.++++++.+.++.+....
T Consensus 83 iDPIDGT~nf~~g~p~f~vsIal~~~g~~v~Gvv~~P~~~~~~~a~~G~Ga~~ng~~i~v~~~~~l~~~~~~~~~~~~~~ 162 (267)
T 2qfl_A 83 IDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAK 162 (267)
T ss_dssp EEEEECHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTSCEEETTEECCCCCCCSSTTEEEEECCCTTCG
T ss_pred EECccCHHHHhcCCCceEEEEEEEECCEEEEEEEEeCCCCCEEEEEcCccccCCCEEecCCCCCCHHHeEEEecCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888887654333
Q ss_pred CCh-HHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCCCCCCcE
Q psy5224 1080 INS-EEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158 (1178)
Q Consensus 1080 ~~~-~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~~~i 1158 (1178)
... ...+...+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|+|||||.++|.+|+|....++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~r~~Gs~al~~~~vA~G~~d~y~~~~~~~WD~aAg~liv~eAGG~vtd~~G~~~~~~~~~v 242 (267)
T 2qfl_A 163 QYATTYINIVGKLFNECADFRATGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNI 242 (267)
T ss_dssp GGHHHHHHHHHHHHTTTEEEEECSCHHHHHHHHHTTSSSEEEESSCCHHHHHHHHHHHHHTTCEEECTTSSSCHHHHCCE
T ss_pred hhhHHHHHHHHHHHHhcCeEEEccHHHHHHHHHhCcCCCEEEECCCCHHHHHHHHHHHHhCCCEEECCCCCcccccCCeE
Confidence 221 2222333444556688999999999999999999999999999999999999999999999999999976566789
Q ss_pred EEeChHHHHHHHHHHhh
Q psy5224 1159 VAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1159 va~~~~l~~~l~~~l~~ 1175 (1178)
+|+|+++|+++++.+++
T Consensus 243 ia~~~~~~~~l~~~l~~ 259 (267)
T 2qfl_A 243 VAGNPRVVKAMLANMRD 259 (267)
T ss_dssp EEECHHHHHHHHHTTTT
T ss_pred EEECHHHHHHHHHHHHH
Confidence 99999999999999876
|
| >2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=438.88 Aligned_cols=257 Identities=23% Similarity=0.444 Sum_probs=220.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeecc---CCcCCCC
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKS---NYLTNFE 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~---~~~~~~~ 993 (1178)
..++++.+++++++|++.+++.+++ ..++++|+ ++|+||++|+++|+.|++.|++.+|++.|+|||+ +.....+
T Consensus 5 ~~~~l~~a~~~a~~Ag~~i~~~~~~--~~~v~~K~~~~d~VT~aD~~~e~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~ 82 (277)
T 2bji_A 5 WQECMDYAVTLAGQAGEVVREALKN--EMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILT 82 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS--CCCEEECSSTTCEEEHHHHHHHHHHHHHHHHHSTTSEEEEHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--ccceeecCCCCCceeHHHHHHHHHHHHHHHHHCCCCeEEecCCCCCCCccCCC
Confidence 3467899999999999999987754 45677887 7899999999999999999999999999999998 4333345
Q ss_pred CccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEE--
Q psy5224 994 NENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIG-- 1071 (1178)
Q Consensus 994 ~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~-- 1071 (1178)
++++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.++|+|+|.+|+|+++||+|+++++.++++++.+.
T Consensus 83 ~~~~WiiDPIDGT~nF~~g~p~~~vsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~i~~~~~~~l~~~~v~~~ 162 (277)
T 2bji_A 83 DNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTE 162 (277)
T ss_dssp SSCEEEEEEEECHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCCCCCGGGCEEECC
T ss_pred CCCEEEEeCCcCHHHHHcCCCCeEEEEEEEECCEEEEEEEEECCCCCEEEEECCCCccCCCEEccCCCCCChhHCEEEEe
Confidence 679999999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred eccCCCCCCChHHHHHHHHHHhhc-CCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCC
Q psy5224 1072 TDFSFKNNINSEEYAKIFQIITKC-KNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK 1150 (1178)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~ 1150 (1178)
++.+......+...+.+.+...+. .++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~Gsaal~~~~vA~G~~d~y~~~~~~~WD~AAg~liv~eAGG~vtd~~G~~ 242 (277)
T 2bji_A 163 LGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGGP 242 (277)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHTTTCSEEECCSCHHHHHHHHHTTSSSEEEEESCCHHHHHHHHHHHHHTTCEEECTTSSB
T ss_pred cCCCCchhhHHHHHHHHHHHHhhccCCeEecCHHHHHHHHHHcCCccEEEECCCChHHHHHHHHHHHhCCCEEECCCCCc
Confidence 443221111111122233344555 6889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCc-EEEeChHHHHHHHHHHhhh
Q psy5224 1151 NYLYTGD-IVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1151 ~~~~~~~-iva~~~~l~~~l~~~l~~~ 1176 (1178)
+.++++. ++|+|+++|+++++.+++.
T Consensus 243 ~~~~~~~~l~a~~~~l~~~l~~~l~~~ 269 (277)
T 2bji_A 243 FDLMSRRVIASSNKTLAERIAKEIQII 269 (277)
T ss_dssp CCTTSSEEEEESSHHHHHHHHHHCCCC
T ss_pred ccCCCCCEEEEECHHHHHHHHHHHHhc
Confidence 8776555 5679999999999998763
|
| >2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=437.98 Aligned_cols=254 Identities=26% Similarity=0.444 Sum_probs=206.7
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeecc---CCcCCCCCc
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKS---NYLTNFENE 995 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~---~~~~~~~~~ 995 (1178)
++++.+++++++|++.+++.+++ ..++++|+ ++|+||++|+++|+.|++.|++.+|++.|+|||+ +.....+++
T Consensus 3 ~~l~~a~~~a~~Ag~~i~~~~~~--~~~v~~K~~~~d~VT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~~~ 80 (273)
T 2fvz_A 3 ECFQAAVQLALRAGQIIRKALTE--EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHS 80 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC--C-------------CHHHHHHHHHHHHHHHTTSTTCEECCCCC-----CCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CcceeecCCCCCceeHHHHHHHHHHHHHHHHHCCCCeEEeCCCCCCCCccCCCCC
Confidence 47889999999999999987754 45677787 7899999999999999999999999999999998 332334567
Q ss_pred cEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEE--ec
Q psy5224 996 NIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIG--TD 1073 (1178)
Q Consensus 996 ~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~--~~ 1073 (1178)
++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.++|+|+|.+|+|+++||+|+++++.++++++.+. ++
T Consensus 81 ~~WiiDPIDGT~nF~~g~p~~~vsIal~~~g~pv~GvV~~P~~~~~~~A~~G~Ga~~ng~~i~~~~~~~l~~~~~~~~~~ 160 (273)
T 2fvz_A 81 PTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIG 160 (273)
T ss_dssp CEEEEEEEECHHHHHTTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTSCEEETTEECCCCCCCCGGGCEEECCCC
T ss_pred CEEEEeCccChHHHhcCCCCeEEEEEEEECCEEEEEEEEECCCCCEEEEEcCccccCCCEECcCCCCCChhHCEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888888887 44
Q ss_pred cCCCCCCChHHHHHHHHHHhh-cCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCCC
Q psy5224 1074 FSFKNNINSEEYAKIFQIITK-CKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNY 1152 (1178)
Q Consensus 1074 ~~~~~~~~~~~~~~~~~~~~~-~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~ 1152 (1178)
.+......+.....+.+...+ ..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~r~~Gsaal~l~~vA~G~~d~y~~~~~~~WD~AAg~liv~eAGG~vtd~~G~~~~ 240 (273)
T 2fvz_A 161 PKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLD 240 (273)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCSEEEBCSCHHHHHHHHHHTSCSEEEEESCCGGGTHHHHHHHHHTTCEEECTTSSCCC
T ss_pred CCcchhhHHHHHHHHHHHhhcccCcEEeccHHHHHHHHHHcCCCCEEEECCCChhhhHHHHHHHHcCCCEEECCCCCccc
Confidence 332111111112223334445 6789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCc-EEEeChHHHHHHHHHHhh
Q psy5224 1153 LYTGD-IVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1153 ~~~~~-iva~~~~l~~~l~~~l~~ 1175 (1178)
++++. ++|+|+++|+++++.+++
T Consensus 241 ~~~~~~l~a~~~~l~~~l~~~l~~ 264 (273)
T 2fvz_A 241 LMACRVVAASTREMAMLIAQALQT 264 (273)
T ss_dssp GGGCEEEEESSHHHHHHHHHCC--
T ss_pred CCCCCEEEEECHHHHHHHHHHHHh
Confidence 76554 667999999999998876
|
| >2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-49 Score=442.25 Aligned_cols=259 Identities=21% Similarity=0.366 Sum_probs=209.3
Q ss_pred CCccccHHHHHHHHHHHHHHHHhccccccce---------EEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeecc
Q psy5224 916 GSPGIYIVEAIKAARKSALIINRGSLELENL---------RFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKS 986 (1178)
Q Consensus 916 ~~~~~~l~~a~~aa~~a~~~~~~~~~~~~~~---------~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~ 986 (1178)
..+.++++.+++++++|++.+++.+.+.... .+++|+++|+||++|+++|+.|++.|++.+|++.|+|||+
T Consensus 6 ~~~~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~d~VT~aD~~ae~~I~~~L~~~~P~~~ilgEE~ 85 (299)
T 2q74_A 6 NEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEG 85 (299)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHSTTCCEECTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccceeeecCCCCchhHHHHHHHHHHHHHHHHHCCCCeEEecCC
Confidence 3456789999999999999999876332222 3456778999999999999999999999999999999998
Q ss_pred CCcCCC----CCccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcC----eecc
Q psy5224 987 NYLTNF----ENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNE----KRIR 1058 (1178)
Q Consensus 987 ~~~~~~----~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~----~~~~ 1058 (1178)
+..... +++++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+|+ +|++
T Consensus 86 ~~~~~~~~~~~~~~~WiIDPIDGT~nFv~g~p~f~vsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~~~~~i~ 165 (299)
T 2q74_A 86 GGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLR 165 (299)
T ss_dssp ------------CCEEEEEEEECHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEEEETTEEEECC
T ss_pred CCCCCCcccCCcceEEEEecccChHHHhcCCCCEEEEEEEEECCEEEEEEEEeCCCCCEEEEECCcceEECCCCCceeee
Confidence 743221 12389999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHH
Q psy5224 1059 VNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIE 1138 (1178)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~e 1138 (1178)
+++.++++++++.+++++.............+...+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++|
T Consensus 166 vs~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~Gsaal~l~~vA~G~~D~y~~~~~~~WD~AAg~lIv~e 245 (299)
T 2q74_A 166 CTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAE 245 (299)
T ss_dssp CCCCCCGGGCEEEEEECSSSTTHHHHHHHHHHHGGGSSEEEBCSCHHHHHHHHHHTSCSEEEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCChhHeEEEEecCCccchhhhHHHHHHHHHhhcCcEEecchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 99988888888888876543322222233334455667899999999999999999999999988999999999999999
Q ss_pred cCCcccccCCCCCCCCCCcEEEeChHHHHHHHHHHhh
Q psy5224 1139 SGGIISNFKGEKNYLYTGDIVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1139 aGg~v~d~~G~~~~~~~~~iva~~~~l~~~l~~~l~~ 1175 (1178)
|||.++|.+|+| .++++.++|+|+++|+++++.+++
T Consensus 246 AGG~vtd~~G~~-~~~~~~ivA~~~~l~~~ll~~l~~ 281 (299)
T 2q74_A 246 AGARVLLSTPRA-GGAGLVVVAAAPGIADELLAALQR 281 (299)
T ss_dssp TTCEEEEC-------CCEEEEEECGGGHHHHHHHHHT
T ss_pred CCCEEECCCCCc-CCCCCEEEEECHHHHHHHHHHHHh
Confidence 999999999999 677778999999999999999876
|
| >1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=419.83 Aligned_cols=241 Identities=23% Similarity=0.303 Sum_probs=207.4
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccc-eEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELEN-LRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~-~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
++++.+.+++++|++.+++.+++... ..+++|+++|+||++|+++|+.|++.|++.+ +.|+|||++... .+++++|
T Consensus 2 ~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~~k~~~d~vT~aD~~~e~~i~~~L~~~~--~~ilgEE~~~~~-~~~~~~W 78 (252)
T 1g0h_A 2 KWDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSLN--VNIVSEELGVID-NSSEWTV 78 (252)
T ss_dssp CHHHHHHHHHHHHHHHHGGGTTCTTTCCEEEEETTTEEEEHHHHHHHHHHHHHHGGGT--SEEEEGGGEEEC-CCCSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccccceEEecCCCCCchhHHHHHHHHHHHHHHHHhC--CEEEECCCCCCC-CCCCeEE
Confidence 46789999999999999998765433 3355677899999999999999999999999 999999987533 4567999
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+++||+|+++++.+++++ .+.+... ..
T Consensus 79 iiDPIDGT~nF~~g~p~~~vsIal~~~g~pv~GvV~~P~~~~~~~a~~G~Ga~~ng~~i~~~~~~~l~~-~v~~~~~-~~ 156 (252)
T 1g0h_A 79 VIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNI-VISYYPS-KK 156 (252)
T ss_dssp EEEEEECHHHHHTTCSCCEEEEEEEESSSEEEEEEEEGGGTEEEEEETTTCCEETTEECCCCCCCTTSC-EEEEECC-TT
T ss_pred EEeCCcChhHHhcCCCCEEEEEEEEECCEEEEEEEEecCCCCEEEEECCcceEECCEEcccCCCCChHH-EEEEccC-ch
Confidence 999999999999999999999999999999999999999999999999999999999999988888777 6665322 11
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCC---
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYL--- 1153 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~--- 1153 (1178)
. ...+...+..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++||||.++|.+|+|+.+
T Consensus 157 --~-----~~~~l~~~~~~~r~~Gsaal~~~~vA~G~~d~y~~~~~~~~~WD~aAg~~iv~eAGG~v~d~~G~~~~~~~~ 229 (252)
T 1g0h_A 157 --I-----DLEKLRNKVKRVRIFGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLN 229 (252)
T ss_dssp --C-----CHHHHHHHCSEECBCSCHHHHHHHHHTTSCSEEEECSSCCCHHHHHHHHHHHHTTTCEEECSSSSBCCCCCC
T ss_pred --H-----HHHHHHHhcCCEEeeCHHHHHHHHHHhcCccEEEECCCCCChHHHHHHHHHHHhCCCEEECCCCCcCccccc
Confidence 1 222334456678999999999999999999999987 5789999999999999999999999999765
Q ss_pred --CCCcEEEeChH-HHHHHHHH
Q psy5224 1154 --YTGDIVAGNQK-IFSQIISL 1172 (1178)
Q Consensus 1154 --~~~~iva~~~~-l~~~l~~~ 1172 (1178)
+++.++|+|++ +|+++++.
T Consensus 230 ~~~~~~iiaa~~~~l~~~l~~~ 251 (252)
T 1g0h_A 230 ATDRLNIIVANSKEMLDIILDL 251 (252)
T ss_dssp SSCCCCCEEESSHHHHHHHHTC
T ss_pred cccCCeEEEECCHHHHHHHHHh
Confidence 34578888885 99998864
|
| >3rko_N NADH-quinone oxidoreductase subunit N; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=447.33 Aligned_cols=313 Identities=35% Similarity=0.612 Sum_probs=271.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHhh
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~~ 670 (1178)
+.+.+..++|++.+|++||++++++|.++..+++++++.||++||+++|.+||.+++.|+.++|..+|++|++++.+...
T Consensus 115 g~~~~~~s~dl~~~~v~~El~~l~~~~Li~~~~~~~~~~eAa~ky~l~~~~gs~~lL~gi~~ly~~~gs~~~~~i~~~~~ 194 (485)
T 3rko_N 115 GGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGDLSFVALGKNLG 194 (485)
T ss_dssp HHHHHHTBCSSHHHHHHHHHTTHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSSCSCCC--
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHh
Confidence 45666789999999999999999999999988788889999999999999999999999999999999999987654221
Q ss_pred hccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhHHHHHH
Q psy5224 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750 (1178)
Q Consensus 671 ~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~~l~ 750 (1178)
..........++..++++|+++|+|++|||.|+||+|+++|+++++++++++|.+++.++.|+.....+.....+..++.
T Consensus 195 ~~~~~~~~~~~~~~li~~g~~~K~~~~PfH~WlPda~~~APtpvsall~~~~K~~~~~ll~R~~~~~~~~~~~~~~~~l~ 274 (485)
T 3rko_N 195 DGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLA 274 (485)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTCTTSCTHHHHHHHHSCHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGCSHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHhcCcCccceecchhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 11112233445667888999999999999999999999999999999999999999988889876554444456778889
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy5224 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830 (1178)
Q Consensus 751 ~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~ 830 (1178)
++|++|+++|++.|++|+|+||++|||||+|+||+++++...+.. ..+..++++|++.|.+.+.++|...+.++
T Consensus 275 ~l~~~s~~~g~l~al~Q~dlKrlLAYSSIsh~G~~l~~l~~~~~~------~~~~~~~~~y~~~~~~~~~~lF~~~~~~~ 348 (485)
T 3rko_N 275 IIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTG------EMSMEAVGVYLAGYLFSSLGAFGVVSLMS 348 (485)
T ss_dssp HHHHHHHHHHHHHHHTCCBHHHHHHHHHHHHHHHHHHHHHTSSSC------SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999764410 13567889999999999999999888875
Q ss_pred hc-cCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-hhhh
Q psy5224 831 NN-TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-GGRI 908 (1178)
Q Consensus 831 ~~-~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~~r~ 908 (1178)
.+ +.++++++++++|+.+++|..+..+.++.+|++|+||+.||++|++++++.++.+.+++..+.+++|+++++ |.|+
T Consensus 349 ~~~~~~~~~~i~~~~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~i~~~~~~~~~~~l~~~~~l~s~is~~yylri 428 (485)
T 3rko_N 349 SPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRV 428 (485)
T ss_dssp CSCCSSCCCBGGGCSSCTTTSHHHHHHHHHHHHHTTTCTTSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCcCcHHHHhChHhhChHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 334788899999999999999999999999999999999999999999999999988888889999999999 7898
Q ss_pred c
Q psy5224 909 I 909 (1178)
Q Consensus 909 ~ 909 (1178)
+
T Consensus 429 ~ 429 (485)
T 3rko_N 429 A 429 (485)
T ss_dssp H
T ss_pred H
Confidence 7
|
| >1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=418.51 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=209.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCcc
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENEN 996 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~ 996 (1178)
..++++.+.+++++|++.+++.+++....+.++|+ ++|+||++|+++|+.|++.|++.+ +.|+|||++.. ..++++
T Consensus 3 ~~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~K~~~~d~vT~aD~~~e~~i~~~L~~~~--~~ilgEE~~~~-~~~~~~ 79 (254)
T 1vdw_A 3 VKTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLG--VNVVSEEIGRI-DQGSDY 79 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTCGGGGCEEEC-----CEEHHHHHHHHHHHHHHHHTT--CEEEETTTEEE-CCSCSE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccccceeeecCCCCCcchHHHHHHHHHHHHHHHHhC--CEEEeCCcCCC-CCCCCE
Confidence 35688999999999999999988654445555688 899999999999999999999998 99999998753 345679
Q ss_pred EEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEecc-C
Q psy5224 997 IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDF-S 1075 (1178)
Q Consensus 997 ~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~-~ 1075 (1178)
+|+|||||||+||++|.|.|||+||+.++|+|++||||+|.++|+|+|.+|+|+++||+|+++++.+ +++ .+.++. +
T Consensus 80 ~WiiDPIDGT~nF~~g~p~f~vsial~~~g~pv~GvV~~P~~~~~~~a~~G~Ga~~ng~~i~~~~~~-l~~-~~~~~~~~ 157 (254)
T 1vdw_A 80 TVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIVERLYEGIPGKGSYLNGEKIKVRELA-EKP-SISFYTKG 157 (254)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEEEEEETTEEEEEEEEEGGGTEEEEEETTTEEEETTEEECCCCCC-SSC-EEEEECSS
T ss_pred EEEEeCCcChHHHhcCCCcEEEEEEEEECCEEEEEEEEecCCCCEEEEECCcEEEECCEEcccCCCC-hhh-EEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998877 777 777765 2
Q ss_pred CCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCC
Q psy5224 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYL 1153 (1178)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~ 1153 (1178)
+ .. + +.. +..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++||||.++|.+|+|+.+
T Consensus 158 ~----~~---~---~l~-~~~~~r~~Gsaal~~~~vA~G~~d~y~~~~~~~~~WD~aAg~~iv~eAGG~v~d~~G~~~~~ 226 (254)
T 1vdw_A 158 K----GT---K---IID-KVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEI 226 (254)
T ss_dssp C----CH---H---HHH-TCSEEEBCSCHHHHHHHHHHTSCSEEEEEEEEECHHHHHHHHHHHHHTTCEEECTTSSBCCC
T ss_pred c----CH---H---HHh-hcCCEeecCHHHHHHHHHHcCCcCEEEEcCCCCChHHHHHHHHHHHhCCCEEECCCCCcccc
Confidence 2 11 1 233 66688999999999999999999999998 7899999999999999999999999999766
Q ss_pred -----CC-CcEEEeChHHHHHHHHHHhh
Q psy5224 1154 -----YT-GDIVAGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1154 -----~~-~~iva~~~~l~~~l~~~l~~ 1175 (1178)
++ +.++|+|+++|+++++.+++
T Consensus 227 ~~~~~~~~~~v~a~~~~l~~~l~~~l~~ 254 (254)
T 1vdw_A 227 TFSATEKVNIIAANNEELLETILRSIEK 254 (254)
T ss_dssp CSCSSCCEEEEEESCHHHHHHHHHTCCC
T ss_pred cccccCCcCEEEEcCHHHHHHHHHHHhC
Confidence 45 56889999999999988753
|
| >1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=412.02 Aligned_cols=236 Identities=22% Similarity=0.306 Sum_probs=207.7
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
.++++.+.+++++|++.+++.+++.....+++|+++|+||++|+++|+.|++.|++. ++.|+|||++.. .+++++|
T Consensus 4 ~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~~~~~~~vT~aD~~~e~~i~~~L~~~--~~~ilgEE~~~~--~~~~~~W 79 (252)
T 1lbv_A 4 RDALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEILRKE--RVTVVTEESGVL--GEGDVFV 79 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCHHHHTCEEEECSSSSEEEHHHHHHHHHHHHHHTTS--SEEEEETTTEEE--ECCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceEEeeCCCCCChHHHHHHHHHHHHHHHHHC--CCEEEeeCCCCC--CCCCeEE
Confidence 457899999999999999998743223334557788999999999999999999998 899999998753 4567899
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCe---EEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQ---ITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFS 1075 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~---pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~ 1075 (1178)
+|||||||+||++|.|.|||+||+.++|+ |++||||+|.+||+|+|.+ +|+++||+|+++++.++++++.+.. .+
T Consensus 80 iIDPIDGT~nF~~g~p~~~vsIal~~~g~~~~~v~GvV~~P~~~~~~~A~~-~Ga~~ng~~i~~~~~~~l~~~~v~~-~~ 157 (252)
T 1lbv_A 80 ALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVYNLATGDEYYADS-SGAYRNGERIEVSDAEELYCNAIIY-YP 157 (252)
T ss_dssp EEEEEECHHHHHTTCSCCEEEEEEESSSBGGGEEEEEEEETTTCCEEEEET-TEEEETTEEECCCCCCSSSSEEEEE-CC
T ss_pred EEECCCChHHHHcCCCceEEEEEEEECCeeCCeEEEEEEEcCCCCEEEEEe-CCeEECCEEcccCCCCCccceEEEE-ec
Confidence 99999999999999999999999999999 9999999999999999999 9999999999999988888877776 33
Q ss_pred CCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC----CCccchHHHHHHHHHcCCcccccCCCCC
Q psy5224 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG----LKPWNIAAGSLLIIESGGIISNFKGEKN 1151 (1178)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~----~~~wD~aA~~~i~~eaGg~v~d~~G~~~ 1151 (1178)
.... . ..++|+.||+++++|+||+|++|+|++.+ .++||+|||.+|++||||.++|.+|+|.
T Consensus 158 ~~~~-~-------------~~~~r~~Gsaal~~~~vA~G~~d~y~~~~~~~~~~~WD~aAg~liv~eAGG~vtd~~G~~~ 223 (252)
T 1lbv_A 158 DRKF-P-------------FKRMRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESL 223 (252)
T ss_dssp CSCC-C-------------CSEEEBCSCHHHHHHHHHTTSSSEEEECCSSCCBCHHHHHHHHHHHHHTTCEEECTTSCCC
T ss_pred CCcc-c-------------cCcEEEeCHHHHHHHHHHcCCccEEEEcCCCCCCChHHHHHHHHHHHHCCCEEECCCCCcc
Confidence 2211 0 55789999999999999999999999988 8999999999999999999999999997
Q ss_pred -C-----CCCCcEEEeChHHHHHHHHHHh
Q psy5224 1152 -Y-----LYTGDIVAGNQKIFSQIISLIN 1174 (1178)
Q Consensus 1152 -~-----~~~~~iva~~~~l~~~l~~~l~ 1174 (1178)
+ .+++.++|+|+++|+++++.++
T Consensus 224 ~~~~~~~~~~~~~va~~~~l~~~l~~~l~ 252 (252)
T 1lbv_A 224 GNKKFDMQERLNIVAANEKLHPKLLELIK 252 (252)
T ss_dssp TTCBSSSCCCBCEEEECTTTHHHHHHHHC
T ss_pred ccccccccCCCEEEEECHHHHHHHHHHhC
Confidence 3 3456789999999999998873
|
| >1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=413.74 Aligned_cols=243 Identities=26% Similarity=0.375 Sum_probs=196.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCcc
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENEN 996 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~ 996 (1178)
..++++.+.+++++|++.+++.+++.+..++++|+ ++|+||++|+++|++|++.|++.+ +.|+|||++... .++++
T Consensus 11 ~~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~~~K~~~~d~VT~aD~~ae~~i~~~L~~~~--~~ilgEE~~~~~-~~~~~ 87 (262)
T 1xi6_A 11 LKFWREVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELG--VNVVSEEVGVID-NESEY 87 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTCGGGGCCCC---------HHHHHHHHHHHHHHGGGT--CEEEETTTEEEC-CCCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccceEeecCCCCchhHHHHHHHHHHHHHHHHhC--CEEEcCCcCCCC-CCCCE
Confidence 45788999999999999999987653333356675 889999999999999999999999 999999987533 45689
Q ss_pred EEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 997 IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 997 ~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
+|+|||||||+||++|.|.|||+||+.++|+|++||||+|.++|+|+|.+|+|+++||+|+++++++++.+ .+.+ .+.
T Consensus 88 ~WiiDPIDGT~nF~~g~p~~~vsIal~~~g~~v~GvV~~P~~~~~~~a~~G~Ga~~ng~~i~v~~~~~l~~-~~~~-~~~ 165 (262)
T 1xi6_A 88 TVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFEGIPGEGAFLNGKRIKVRKTPDEKP-SISF-YSR 165 (262)
T ss_dssp EEEEEEEESHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCC-------CEEE-ECS
T ss_pred EEEEECCcChHHHHcCCCcEEEEEEEEECCEEEEEEEEecCCCCEEEEECCeeEEECCEEeecCCCCCHHH-eEEE-ccC
Confidence 99999999999999999999999999999999999999999999999999999999999999988877777 6665 333
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCC-
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYL- 1153 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~- 1153 (1178)
... .+ +. .+..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++||||.++|.+|+|+.+
T Consensus 166 ~~~-----~~---~l-~~~~~~r~~Gsaal~~~~vA~G~~d~y~~~~g~~~~WD~aAg~liv~eAGG~vtd~~G~~l~~~ 236 (262)
T 1xi6_A 166 GKG-----HE---IV-KHVKRTRTLGAIALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDIS 236 (262)
T ss_dssp SSC-----SS---SG-GGSSCEECCSCHHHHHHHHHHTSCSEEEEEEEEECHHHHHHHHHHHHTTTCEEECSSSSBCCCC
T ss_pred hHH-----HH---HH-hhcCCEEEecHHHHHHHHHHcCCCcEEEECCCCCChHHHHHHHHHHHHCCCEEECCCCCcCccc
Confidence 221 11 12 456789999999999999999999999998 7899999999999999999999999999763
Q ss_pred ----CCCcEEEeChH-HHHHHHHHHh
Q psy5224 1154 ----YTGDIVAGNQK-IFSQIISLIN 1174 (1178)
Q Consensus 1154 ----~~~~iva~~~~-l~~~l~~~l~ 1174 (1178)
+++.++|+|++ +|+++++.++
T Consensus 237 ~~~~~~~~iva~~~~~l~~~l~~~l~ 262 (262)
T 1xi6_A 237 FNATDRLDVIAVNSEELLKTILSLLE 262 (262)
T ss_dssp SCSCCCEEEEEESCHHHHHHHC----
T ss_pred cccCCCCEEEEECcHHHHHHHHHHhC
Confidence 34568899998 9999988764
|
| >3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=407.69 Aligned_cols=231 Identities=23% Similarity=0.312 Sum_probs=190.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcccc-ccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC---CCC
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLE-LENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT---NFE 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~-~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~---~~~ 993 (1178)
..++++.+++++++|++.+++.+++ ....++++|+++|+||++|+++|+.|++.|++ +| +.|+|||++... ..+
T Consensus 20 ~~~~l~~a~~~a~~Ag~~i~~~~~~~~~~~~v~~K~~~d~VT~aD~~aE~~I~~~L~~-~P-~~ilgEE~~~~~~~~~~~ 97 (292)
T 3b8b_A 20 FQSNAMAAIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGKHMDYAVRRG 97 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCTTC---CTTSHHHHHHHHHHHHHHHHHTT-SS-SCEEETTCCC-CHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCceeEECCCCCeeEHHHHHHHHHHHHHHHh-CC-CeEEeecCCCCCccccCC
Confidence 4568899999999999999988753 13466778999999999999999999999999 99 999999987532 234
Q ss_pred CccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEc-----------------Cee
Q psy5224 994 NENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLN-----------------EKR 1056 (1178)
Q Consensus 994 ~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n-----------------~~~ 1056 (1178)
.+++|+|||||||+||++|.|.|||+||+.++|+|++||||+|.+||+|+|.+|+|+|+| ++|
T Consensus 98 ~~~~WiIDPIDGT~nFv~g~p~f~VsIAl~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~n~~~~~~~~~~~~~~~~~~~~ 177 (292)
T 3b8b_A 98 WDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVIYVPVKKELYFAVEGTGAYKCSGIVGLEDEGVTLQQMIEKS 177 (292)
T ss_dssp CSEEEEEEEEECHHHHHTTCCCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEEEESCCSCCSSSCCHHHHHHHS
T ss_pred CccEEEEecCcChhhHhcCCCCEEEEEEEEECCEEEEEEEEecCCCCEEEEECCCceeecccccccccccccccccCCce
Confidence 578999999999999999999999999999999999999999999999999999999997 678
Q ss_pred cccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHH-h--hcCCccccchHHHhHHHHHccccCEEEecC-CCccchHHH
Q psy5224 1057 IRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQII-T--KCKNLRNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAG 1132 (1178)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~-~~~wD~aA~ 1132 (1178)
+++++.+..+..++....++ ..+ ......+.. . +..++|+.|| ++++|+||+|++|+|++.+ .++||+|||
T Consensus 178 i~vs~~~~~~~~~~~~~~~~---~~~-~~~~~~~~l~~~~~~~~~r~~GS-al~l~~VA~G~~D~y~~~~~~~~WD~AAg 252 (292)
T 3b8b_A 178 ERMPLADARDHFIAVASRSH---LTP-ETETYIADLKKKHGNVELISSGS-SIKICLVAEGKADVYPRFAPTMEWDTAAG 252 (292)
T ss_dssp EESSCCCCCSSEEEEECSSC---CCH-HHHHHHHHHHHHCTTEEEEECST-THHHHHHHHTSCSBEEECSCEEHHHHHHH
T ss_pred eeecCCCCCCCeEEEEecCC---CCH-HHHHHHHHHhcccCCCceEEccH-HHHHHHHhCCCCCEEEecCCCCchhhHHH
Confidence 88877665445444443221 122 223333323 2 3557899999 9999999999999999876 689999999
Q ss_pred HHHHHHcCCccccc-CCCCCCCCC
Q psy5224 1133 SLLIIESGGIISNF-KGEKNYLYT 1155 (1178)
Q Consensus 1133 ~~i~~eaGg~v~d~-~G~~~~~~~ 1155 (1178)
.+|++||||.++|. +|+|+.+++
T Consensus 253 ~lIv~eAGG~vtd~~~G~~~~~~~ 276 (292)
T 3b8b_A 253 HAIARAAGMEVYQAGKEEPLRYNK 276 (292)
T ss_dssp HHHHHHTTEEEEETTSSSBCCCSC
T ss_pred HHHHHhCCCEEecCCCCCccccCc
Confidence 99999999999999 999976654
|
| >1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=406.83 Aligned_cols=254 Identities=20% Similarity=0.280 Sum_probs=209.6
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccc---cceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC----
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLEL---ENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT---- 990 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~---~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~---- 990 (1178)
..++++.+++++++|++.+++.+++. .+.++++|+++|+||++|+++|++|++.|++.||++.|+|||++...
T Consensus 3 ~~~~l~~a~~aa~~Ag~~i~~~~~~~l~~~~~~~~~K~~~d~VT~aD~~ae~~I~~~L~~~fP~~~ilgEE~~~~~~~~~ 82 (357)
T 1ka1_A 3 LERELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNFPDDKVVGEESSSGLSDAF 82 (357)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEECTTSCEEEHHHHHHHHHHHHHHHHHCTTCCEEESCCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccceeecCCCCcccHHHHHHHHHHHHHHHhhCCCCcEEcCCCCccccchh
Confidence 34688999999999999999887542 24667889999999999999999999999999999999999986421
Q ss_pred -------------------------------------------------CCCCccEEEEeccCCchHHhccCCCeEEEEE
Q psy5224 991 -------------------------------------------------NFENENIWIIDPLDNITNFSHNFPQYCISIA 1021 (1178)
Q Consensus 991 -------------------------------------------------~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ia 1021 (1178)
+.+++++|+|||||||+||++|. .|||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~g~~~~~~~~~~WiIDPIDGT~nFv~g~-~~~VsIa 161 (357)
T 1ka1_A 83 VSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGE-QFAVCLA 161 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCCSCCSSSCCCSHHHHHHHHHTTBCCCCSSSEEEEEEEEETHHHHHTTS-CCEEEEE
T ss_pred hhhhhhhhcccchhhhhhhcccccccccccccccchHHhhhhhhcccccCCCCCCEEEEccccChHHHhcCC-ccEEEEE
Confidence 12356899999999999999998 6999999
Q ss_pred EEECCeEEEEEEEecCC----------------CcEEEEecCCceEE---c----CeecccCCCCCCCCcEEEeccCCCC
Q psy5224 1022 LKQKKQITHSVIYDPIR----------------NDLFTAIKGCGAYL---N----EKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 1022 l~~~g~pv~gvV~~P~~----------------~~~~~a~~g~ga~~---n----~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+.++|+|++||||+|.+ |++|+|.+|+|+|+ | ++|+++++.++++++.+..+.+...
T Consensus 162 l~~~g~pv~GVV~~P~~~~~~~~~~~~~~~~~~~~~~~A~~G~Ga~~~~~n~g~~~~~i~v~~~~~~~~~~v~~~~~~~~ 241 (357)
T 1ka1_A 162 LIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGH 241 (357)
T ss_dssp EEETTEEEEEEEEETTCCGGGGTCCCCTTHHHHCEEEEEETTSCEEEEETTTCSSCEECCCCCCSCGGGCEEEECSCTTT
T ss_pred EEECCEEEEEEEECCCccccccccccccccCCCCeEEEEECCcceEeecccCCCCCceeecCCCCCccccEEEEecCccc
Confidence 99999999999999999 99999999999999 4 4899998888888887776643221
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecCCC------ccchHHHHHHHHHcCCcccccCCC-CC
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLK------PWNIAAGSLLIIESGGIISNFKGE-KN 1151 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~------~wD~aA~~~i~~eaGg~v~d~~G~-~~ 1151 (1178)
. .........+.......+|. | +++++|+||+|++|+|++.+.+ +||+|||.+|++||||.++|.+|+ |+
T Consensus 242 ~-~~~~~~~~~~~l~~~~~~r~-~-aal~~~~VA~G~~D~y~~~~~~~~~~~~~WD~AAg~lIv~eAGG~vtd~~G~~~l 318 (357)
T 1ka1_A 242 S-SHDEQTAIKNKLNISKSLHL-D-SQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPL 318 (357)
T ss_dssp S-CHHHHHHHHHHTTCCEEEEC-S-STHHHHHHHHTSCSEEEECCSSTTCCCBGGGTHHHHHHHHHTTCEEECSSSCCBC
T ss_pred c-cHHHHHHHHHhcCCCCcEeH-h-HHHhHHHhhcCCCCEEEEccCcccccCccccccHHHHHHHHcCCEEECCCCCccc
Confidence 1 22221222222222334565 4 5899999999999999987664 999999999999999999999999 87
Q ss_pred CCC------CCcEEEe--ChHHHHHHHHHHhh
Q psy5224 1152 YLY------TGDIVAG--NQKIFSQIISLINL 1175 (1178)
Q Consensus 1152 ~~~------~~~iva~--~~~l~~~l~~~l~~ 1175 (1178)
.++ .++++|+ |+++|+++++.+++
T Consensus 319 ~~~~~~~~~~~g~iaa~~~~~lh~~ll~~l~~ 350 (357)
T 1ka1_A 319 DFGNGRTLATKGVIASSGPRELHDLVVSTSCD 350 (357)
T ss_dssp CTTSSSBCSSSCEEEESCCHHHHHHHHHHHHH
T ss_pred ccCCCcccccCcEEEEeCCHHHHHHHHHHHHH
Confidence 654 3467876 99999999999876
|
| >1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=404.68 Aligned_cols=247 Identities=15% Similarity=0.254 Sum_probs=200.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhccccccceEEEeccCc-ccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCC----
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLELENLRFEEKKYE-NFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNF---- 992 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~-d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~---- 992 (1178)
..++++.+++++++|++.+++.+++ ...++++|+++ |+||++|+++|++|++.|++.||++.|+|||++.....
T Consensus 8 ~~~~l~~a~~~a~~Ag~~i~~~~~~-~~~~~~~K~~~~d~VT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~~~~~~~ 86 (308)
T 1jp4_A 8 LMRLVASAYSIAQKAGTIVRCVIAE-GDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIGEEDLPPGEVDQEL 86 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEEETTEEECHHHHHHHHHHHHHHHHHCTTSEEEESSCCC--CCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCcceeecCCCCCCccHHHHHHHHHHHHHHHHHCCCCcEEccCCCcccccchhh
Confidence 4578999999999999999987753 34556678766 99999999999999999999999999999998742111
Q ss_pred ----------------------CCccEEEEeccCCchHHhccC-CCeEEEEEEEECCeEEEEEEEecC----------CC
Q psy5224 993 ----------------------ENENIWIIDPLDNITNFSHNF-PQYCISIALKQKKQITHSVIYDPI----------RN 1039 (1178)
Q Consensus 993 ----------------------~~~~~wvIDPIDGT~nf~~g~-p~~~i~ial~~~g~pv~gvV~~P~----------~~ 1039 (1178)
+++++|+|||||||+||++|. |.|||+||+.++|+|++||||+|. +|
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~wIDPIDGT~nFv~g~~p~~~vsIal~~~g~pv~GvV~~P~~~~~~~~~~~~~ 166 (308)
T 1jp4_A 87 IEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLG 166 (308)
T ss_dssp CCCCCCHHHHTSCCCGGGTTCCGGGEEEEEEEEECHHHHHTTCGGGCEEEEEEEETTEEEEEEEEETTTTTTSCTTSCCC
T ss_pred hhhhhhHHHhhhccchhhhhcCCCcceEEEcCCcchhHHhcCCCCceEEEEEEEECCEEEEEEEECCCCCCccCccCCCC
Confidence 134344499999999999999 999999999999999999999999 99
Q ss_pred cEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEE
Q psy5224 1040 DLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGF 1119 (1178)
Q Consensus 1040 ~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~ 1119 (1178)
++|+|.+|+|++ + ++++..+. .+..+.++.++. . +......+...+ .++|+.||+++++|+||+|++|+|
T Consensus 167 ~~~~A~~G~Ga~-~-~~~~~~~~---~~~~v~~~~~~~---~-~~~~~~~~~l~~-~~~r~~Gsaal~~~~vA~G~~d~y 236 (308)
T 1jp4_A 167 RTIWGVLGLGAF-G-FQLKEAPA---GKHIITTTRSHS---N-KLVTDCIAAMNP-DNVLRVGGAGNKIIQLIEGKASAY 236 (308)
T ss_dssp EEEEEETTTEEE-S-SCCCCCCT---TCCEEEEESSSC---C-HHHHHHHHTTCC-SEEEEESCHHHHHHHHHTTSCSEE
T ss_pred eEEEEecCCCcc-c-ccCCCCCC---CCeEEEEeCCCC---h-HHHHHHHHhcCC-CceEEeccHHHHHHHhhcCCccEE
Confidence 999999999998 3 34433221 445665554332 1 222222222222 578999999999999999999999
Q ss_pred Eec--CCCccchHHHHHHHHHcCCcccccCCCCCCC-------CCCcEEEeChHHHHHHHHHHhhh
Q psy5224 1120 FEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYL-------YTGDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1120 ~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~-------~~~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
++. +.++||+|||.+|++||||.++|.+|+|+.+ ++++++|+| ++|+++++.++++
T Consensus 237 ~~~~~~~~~WD~AAg~liv~eAGG~vtd~~G~~~~~~~~~~~~~~~~vvaa~-~lh~~ll~~l~~~ 301 (308)
T 1jp4_A 237 VFASPGCKKWDTCAPEVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAAL-RNYEYYASRVPES 301 (308)
T ss_dssp EECSSCCBHHHHHHHHHHHHHTTCEEECTTSCCCCCSTTSCSBCTTCEEEES-SCHHHHHHHSCHH
T ss_pred EeCCCCCccccccHHHHHHHHcCCEEECCCCCccccCCCccccCCceEEEEh-HHHHHHHHHHHHH
Confidence 964 6899999999999999999999999999766 346799999 9999999988763
|
| >3rko_M NADH-quinone oxidoreductase subunit M; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=416.01 Aligned_cols=303 Identities=21% Similarity=0.356 Sum_probs=256.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhccccch
Q psy5224 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNN----IFSSEAAIKYFILGILSSGFMLYGISIL----YGITGTLEL 662 (1178)
Q Consensus 591 ~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~----~~~~~aa~kY~~~~~~gs~~lL~gi~ll----~~~~gs~~~ 662 (1178)
++..+..++|++.+|++||++++++|.++..|+.+ +++.||++||++++.+||.++++|+.++ |..+|++++
T Consensus 126 ~~~~~~~s~dl~~~~v~~E~~~i~s~~LI~~wg~~~~~~~~~~~Aa~ky~l~~~~gs~~lL~gi~~l~~~~~~~~G~~~~ 205 (509)
T 3rko_M 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTF 205 (509)
T ss_dssp HHHHHHHBCBHHHHHHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchh
Confidence 45566789999999999999999999999886544 3689999999999999999999999988 677898755
Q ss_pred --hhHHHHhhhccCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q psy5224 663 --QSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLL 739 (1178)
Q Consensus 663 --~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~lls~-~~k~~~~~~l~~~~~~~~~ 739 (1178)
+++.+ ...+.....+..+++++|+++|+|++|||.|+||+|+++|+++++++++ .+|.+++. +.|+.....+
T Consensus 206 ~~~~l~~----~~~~~~~~~~~~~~~~~g~~~K~~~~PfH~WLP~a~~~aPt~vsalla~~l~K~g~y~-llR~~~~~~~ 280 (509)
T 3rko_M 206 NYEELLN----TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYG-LLRFSLPLFP 280 (509)
T ss_dssp BHHHHHH----CCCCTTHHHHHHHHHHHHHHHHTTCSSTTTHHHHHHHHSCHHHHHHHHHTHHHHHHHH-HHHHHTTTSH
T ss_pred hHHHHHh----hccCchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 44432 1223334445556678899999999999999999999999999999997 57877766 5587655555
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHH
Q psy5224 740 PLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAI 819 (1178)
Q Consensus 740 ~~~~~~~~~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 819 (1178)
.....+..++..+|++|+++|++.|++|+|+||++|||||+|+||+++++...+. .+..++++|+++|.+.+
T Consensus 281 ~~~~~~~~~l~~lg~~t~l~g~~~al~Q~dlKrllAYSSIsh~G~~l~~l~~~~~--------~~~~~a~~~~i~h~l~k 352 (509)
T 3rko_M 281 NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ--------LAYQGAVIQMIAHGLSA 352 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHTSCCH--------HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccH--------HHHHHHHHHHHHHHHHH
Confidence 5445566788899999999999999999999999999999999999999865432 46778999999999999
Q ss_pred HHHHHHHHHHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHhhchHHHHHHHHHHH
Q psy5224 820 LGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCS 899 (1178)
Q Consensus 820 ~~lf~~~~~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s 899 (1178)
..+|+..+.++++. +++++++++|+.+++|.....+.++.+|++|+||+.||++|+.++++.++.+.+ +..+.++++
T Consensus 353 ~~LFl~~g~i~~~~--~~~~i~~~~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~-~~~~~~~~~ 429 (509)
T 3rko_M 353 AGLFILCGQLYERI--HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV-ITVISTFGL 429 (509)
T ss_dssp HHHHHHHHHHHHHH--CCCBGGGCCSGGGTCSSHHHHHHHHHHHHSCCTTSHHHHHHHHHHHHHHHHCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--ccccHHHhCCCccccHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHhHH-HHHHHHHHH
Confidence 99999999988876 788999999999999999999999999999999999999999999999998754 445556677
Q ss_pred HHHHh-hhhhc
Q psy5224 900 LIGAK-GGRII 909 (1178)
Q Consensus 900 ~~~~~-~~r~~ 909 (1178)
++++. |.|+.
T Consensus 430 ~ls~~y~lr~~ 440 (509)
T 3rko_M 430 VFASVYSLAML 440 (509)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777 56665
|
| >3rko_L NADH-quinone oxidoreductase subunit L; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=405.17 Aligned_cols=305 Identities=21% Similarity=0.313 Sum_probs=258.3
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHh
Q psy5224 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669 (1178)
Q Consensus 590 ~~~ll~~~s~~~~~~~~~~El~~l~~~~Li~~~~~~~~~~~aa~kY~~~~~~gs~~lL~gi~ll~~~~gs~~~~~~~~~~ 669 (1178)
.+++.+..|+|++.+|++||..++++|.++..|++++++.||++||+++|.+||.++++|+.++|..+|++|++++.+..
T Consensus 125 ~~ml~l~~s~nl~~~~i~~E~~~l~sylLI~~~~~~~~~~~Aa~kyfl~~~igs~~lL~gi~~l~~~~gs~~~~~l~~~~ 204 (613)
T 3rko_L 125 ASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELA 204 (613)
T ss_dssp HHHHHHHTBSBSHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCBHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHh
Confidence 45666788999999999999999999999988888888999999999999999999999999999999999998876533
Q ss_pred hhc-cCChhHHHHHHHHHHHHHHHhhccCccccccccccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHhHHH
Q psy5224 670 KLN-NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL-LLSTTPKLSLFVIIYRLLIKCLLPLVINWQK 747 (1178)
Q Consensus 670 ~~~-~~~~~~~~~~~~ll~~g~~~Klgl~Pfh~Wlp~~~~~~~~~~~~-lls~~~k~~~~~~l~~~~~~~~~~~~~~~~~ 747 (1178)
... +.+.....+...++++|++.|+|++|||.|+||+|++ |+++++ ++++.+++++.+++.|+.... . ....+..
T Consensus 205 ~~~~~~~~~~~~~~~~ll~~g~~~K~a~~PfH~WLPdA~e~-PtpvSali~a~~~v~aGvy~l~R~~~~~-~-~~~~~~~ 281 (613)
T 3rko_L 205 PAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAG-PTPVSALIHAATMVTAGVYLIARTHGLF-L-MTPEVLH 281 (613)
T ss_dssp HHHCTTCSSSHHHHHHHHHHHHHHHHTCTTSTTHHHHHTTS-CHHHHHHHHHTTHHHHHHHHHHHTHHHH-H-TSHHHHH
T ss_pred hhcccccchHHHHHHHHHHHHHHHHhcccccHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH-h-hhHHHHH
Confidence 211 1112234456677889999999999999999999975 666665 567888889999988875222 1 1223346
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHHHHHHHHHhhhcccchhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5224 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827 (1178)
Q Consensus 748 ~l~~~~~ls~~~g~~~al~q~~~k~lLAySSi~~~G~i~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~ 827 (1178)
++..+|++|+++|++.|++|+|+||++||||++|+||+++++... +..++++|++.|++.+..+|+..+
T Consensus 282 ~l~~lg~~t~l~gal~al~Q~DiKrllAYSSisqmG~m~~~l~~~-----------~~~~a~~~l~~Ha~~ka~LFl~aG 350 (613)
T 3rko_L 282 LVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ-----------AWDAAIFHLMTHAFFKALLFLASG 350 (613)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSBHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 788899999999999999999999999999999999999988542 346889999999999999999888
Q ss_pred HHhhccCCCCchhhhhhhhcccChHHHHHHHHHHHHhcCCCC-ccchhHHHHHHHHHHhhchHHHHHHHHHHHHHHHh-h
Q psy5224 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPP-TIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGAK-G 905 (1178)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gl~~~~p~~~~~~~~~~lsl~GlPP-~~gF~~K~~i~~~~~~~~~~~l~~l~ll~s~~~~~-~ 905 (1178)
.+.++. ++++++++++|+.+++|.+...+.++.+|++|+|| +.||++|+.++++.++.+.++...+.++++++++. |
T Consensus 351 ~vi~~~-~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~GlPp~~~GF~sK~~il~~~~~~~~~~~~~~~~~~s~lt~~Y~ 429 (613)
T 3rko_L 351 SVILAC-HHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYT 429 (613)
T ss_dssp HHHHHT-TSCCBSTTCCCCTTTCHHHHHHHHHHHHHHHTCSSSBHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhcccHHHhCCccccCcHHHHHHHHHHHHHhCCCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHh
Confidence 664432 25678999999999999999999999999999999 99999999999999998887777778888999988 6
Q ss_pred hhhc
Q psy5224 906 GRII 909 (1178)
Q Consensus 906 ~r~~ 909 (1178)
.|++
T Consensus 430 lrl~ 433 (613)
T 3rko_L 430 FRMI 433 (613)
T ss_dssp HHHH
T ss_pred hhhe
Confidence 8886
|
| >1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=388.81 Aligned_cols=249 Identities=15% Similarity=0.167 Sum_probs=193.9
Q ss_pred ccHHHHHHHHHHHHHHHHhcccccc--ceEEEeccC--------cccccHHHHHHHHHHHHHHHhcCCC--CeEEeeccC
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELE--NLRFEEKKY--------ENFVFNINKASEKIITKILFNTYPS--YAFLIKKSN 987 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~--~~~~~~K~~--------~d~vT~aD~~~e~~i~~~L~~~~p~--~~iigEE~~ 987 (1178)
++++.+++++++|++.+++.+++.+ ..++++|++ +|+||++|+++|++|++.|++.||+ +.|+|||++
T Consensus 3 ~~l~~a~~~a~~Ag~~i~~~~~~~~l~~~~v~~K~~~~~~~~~~~d~VT~aD~~ae~~I~~~L~~~fP~~~~~ilgEE~~ 82 (400)
T 1inp_A 3 DILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEESN 82 (400)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccceEecCCcccccccCCCCccHHHHHHHHHHHHHHHHhCCCcCCcEEeccCC
Confidence 4788999999999999998875421 355677866 8999999999999999999999999 889999986
Q ss_pred C-cC--------------------------C-------------CC-----------------CccEEEEeccCCchHHh
Q psy5224 988 Y-LT--------------------------N-------------FE-----------------NENIWIIDPLDNITNFS 1010 (1178)
Q Consensus 988 ~-~~--------------------------~-------------~~-----------------~~~~wvIDPIDGT~nf~ 1010 (1178)
. .. . .+ ++++|+|||||||+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~a~~~l~~~~~~~~~~~~~~l~~i~~~~~~~~~~WiIDPIDGT~nFi 162 (400)
T 1inp_A 83 ELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQYI 162 (400)
T ss_dssp EEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHHHH
T ss_pred ccccccccccccccccchhhHHHHHHHHhhccchhhhhhhhhccccccCcHHHhhhhcccCCccceEEEEcCCcChHHHh
Confidence 4 10 0 11 46799999999999999
Q ss_pred ccCCCe--------------EEEEEEEE--CCeEEEEEEEecC----------CCcEEEEecCCceEEcCee--cccCCC
Q psy5224 1011 HNFPQY--------------CISIALKQ--KKQITHSVIYDPI----------RNDLFTAIKGCGAYLNEKR--IRVNKR 1062 (1178)
Q Consensus 1011 ~g~p~~--------------~i~ial~~--~g~pv~gvV~~P~----------~~~~~~a~~g~ga~~n~~~--~~~~~~ 1062 (1178)
+|.|+| ||+||+.+ +|+|++||||+|. +|++|+|.+|.|+++|+++ ++++..
T Consensus 163 ~G~~~f~~~~~~~~~~~p~~aVsIal~~~~~G~pv~GVI~~P~~~~~~~~~~~~g~~~~A~~G~Ga~~~~~~~~~~~~~~ 242 (400)
T 1inp_A 163 KGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSN 242 (400)
T ss_dssp HCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSSTTT
T ss_pred cCCcccccccccccccccccEEEEEEEEccCCeEEEEEEecCCccccccccccCceEEEEecCCCccccCCCcccccccc
Confidence 999998 99999997 9999999999998 8999999999999999864 333322
Q ss_pred CCCC------------Cc-EEEeccCCCCCCChHHHHHHHHHHhhcCCcccc--chHHHhHHHHHccccCEEEec--CCC
Q psy5224 1063 NKIN------------DA-LIGTDFSFKNNINSEEYAKIFQIITKCKNLRNI--GTSSLNLAYVASGKLDGFFEK--GLK 1125 (1178)
Q Consensus 1063 ~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--Gs~~~~~~~va~G~~d~~~~~--~~~ 1125 (1178)
+++. +. .......+... . .+...+...+|.. ||+++++|+||+|++|+|++. +.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~----~~~l~~~~~~r~~~~gsaalk~~~VA~G~~D~y~~~~~~~~ 314 (400)
T 1inp_A 243 SEAQSQGTQNPSSEGSCRFSVVISTSEKET----I----KGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTF 314 (400)
T ss_dssp SSCSSCCCCBTTBTTSSSSCCEEEECTTCC----S----CCCCTTTTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCB
T ss_pred cccccccccccccccccceEEEEeCCCCcH----H----HHHHHHHCCCcEEecCcHHHHHHHHhCCCCCEEEecCCCCc
Confidence 2221 11 11111111110 0 0111112246655 889999999999999999985 378
Q ss_pred ccchHHHHHHHHHcCCcccccCCC------------CCC--------------CCCCcEEE-eChHHHHHHHHHHhhh
Q psy5224 1126 PWNIAAGSLLIIESGGIISNFKGE------------KNY--------------LYTGDIVA-GNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1126 ~wD~aA~~~i~~eaGg~v~d~~G~------------~~~--------------~~~~~iva-~~~~l~~~l~~~l~~~ 1176 (1178)
+||+|||++|++||||.++|.+|+ |+. .++++++| +|+++|+++++.+++.
T Consensus 315 ~WD~AAg~lIv~eAGG~vtd~~G~~~~~~~~~~~~~~l~y~~~~~~~~g~~~~~~~~gviaa~~~~~~~~ll~~l~~~ 392 (400)
T 1inp_A 315 KWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQH 392 (400)
T ss_dssp HHHHHHHHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTT
T ss_pred hHhhHHHHHHHHHcCCeEEccCCcccccccccccccccccCCcccccccchhhcccCCEEEEeCHHHHHHHHHHHHHH
Confidence 999999999999999999999886 433 33466887 9999999999988764
|
| >1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes, gluconeogenesis, hydrola; HET: F6P; 1.30A {Sus scrofa} SCOP: e.7.1.1 PDB: 1eyi_A* 1eyj_A* 1cnq_A* 1eyk_A* 1nux_A* 1nuy_A* 1nuz_A* 1nv0_A* 1nv1_A* 1nv2_A* 1nv3_A* 1nv4_A* 1nv5_A* 1nv6_A* 1nv7_A* 1q9d_A* 2qvu_A* 2qvv_A* 1fj6_A* 1fj9_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=351.91 Aligned_cols=257 Identities=11% Similarity=0.174 Sum_probs=206.3
Q ss_pred CCCccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--C
Q psy5224 915 VGSPGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--N 991 (1178)
Q Consensus 915 ~~~~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~ 991 (1178)
.....++++.+.++++++++.+++.. .........+|.++|+||++|+++|++|++.|++.+|++.++|||.+... +
T Consensus 27 ~~~l~~ll~~~~~aa~~i~~~i~~~~l~~~~g~~~~~~~~gd~vt~~D~~ae~~i~~~L~~~~p~~~ilsEE~~~~~~~~ 106 (337)
T 1nuw_A 27 TGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVE 106 (337)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHTTTTTTCCSEEEEECTTSCEEEHHHHHHHHHHHHHHHHTTCEEEEEETTCSSCEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCCCChhhHHHHHHHHHHHHHHHhhCCCCEEEeCCCCCccccC
Confidence 34456788899999999999998864 22222344567889999999999999999999999999999999987532 1
Q ss_pred CC--CccEEEEeccCCchHHhccCCC---eEEEE------E----EEECCe--EEEEEE-EecCCCcEEEE---------
Q psy5224 992 FE--NENIWIIDPLDNITNFSHNFPQ---YCISI------A----LKQKKQ--ITHSVI-YDPIRNDLFTA--------- 1044 (1178)
Q Consensus 992 ~~--~~~~wvIDPIDGT~nf~~g~p~---~~i~i------a----l~~~g~--pv~gvV-~~P~~~~~~~a--------- 1044 (1178)
.+ ++++|+|||||||+||++|.|. |||++ + +.++|+ |++|+| |+|.++++|++
T Consensus 107 ~~~~~~~~wiiDPLDGTsNf~~g~p~gtIf~V~i~~~~~~a~~~~l~~~G~~~~~aG~v~y~P~~~~~~~ag~g~~~f~l 186 (337)
T 1nuw_A 107 PEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFML 186 (337)
T ss_dssp GGGEEEEEEEEEEEECGGGTTTTCCEEEEEEEEECCCSSCCCGGGGCCCGGGCSEEEEEEESSSEEEEEEETTEEEEEEE
T ss_pred cCCCCCEEEEEECCcChHHHhCCCCCccEEEEEecccCCCcchhhhccCCCceEEEEEEEecccceEEEEecCCcceeEe
Confidence 22 5689999999999999999999 99999 5 888886 999999 99999999999
Q ss_pred ecCCce-EEcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh------hcCCccccchHHHhHH-HHHcccc
Q psy5224 1045 IKGCGA-YLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT------KCKNLRNIGTSSLNLA-YVASGKL 1116 (1178)
Q Consensus 1045 ~~g~ga-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~r~~Gs~~~~~~-~va~G~~ 1116 (1178)
.+|.|+ ++|++++++++++.+.. .+........ +..+++.+... +..++|+.||+++++| +||+|++
T Consensus 187 ~~g~Gaf~ln~~~i~v~~~~~l~~----~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~R~~GS~ald~~r~va~G~~ 261 (337)
T 1nuw_A 187 DPAIGEFILVDRDVKIKKKGSIYS----INEGYAKEFD-PAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGI 261 (337)
T ss_dssp ETTTTEEEEEECSCCCCSSCSEEE----CCGGGGGGCC-HHHHHHHHHHHSCTTCCCCCEECCCSCHHHHHHHHHHHCCE
T ss_pred cCCCCeEEecCCceeeCCCCceEE----eecccccccC-HHHHHHHHHHhhccccCCCCCEEEehhHHHHHHHHHHcCce
Confidence 899999 68999999877655422 2211111222 23334443332 3457899999999999 9999999
Q ss_pred CEEEec------CCCccchHHHH-HHHHHcCCcccccCCCCCCC------CCCcEEEeChHHHHHHHHHHhhh
Q psy5224 1117 DGFFEK------GLKPWNIAAGS-LLIIESGGIISNFKGEKNYL------YTGDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1117 d~~~~~------~~~~wD~aA~~-~i~~eaGg~v~d~~G~~~~~------~~~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
|+|... ++++||.||+. +|+|||||.++|.+|+++.. .+..+++++++.|+++.+.++++
T Consensus 262 d~yp~~~~~~~g~lr~wd~AA~~a~IveeAGG~~td~~g~~l~~~~~~~~~r~~l~~gs~~~v~~~~~~~~~~ 334 (337)
T 1nuw_A 262 FMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKH 334 (337)
T ss_dssp EEECCBTTBTTCSSBTTTTHHHHHHHHHHTTCEEECSSSBGGGCCCSSTTCBCCEEEECHHHHHHHHHHHHHC
T ss_pred EEEeecccCCCCCccchhhHHHHHHHHHhCCCEEECCCCCccccCcccCCCcceEEEECHHHHHHHHHHHHHh
Confidence 999753 57899999999 99999999999999988653 23468899999999999999875
|
| >2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site, quaternary conformation, hydrolas; 1.45A {Escherichia coli} PDB: 2owz_A* 2ox3_A* 2q8m_A* 2qvr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=312.14 Aligned_cols=257 Identities=13% Similarity=0.122 Sum_probs=177.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--CCC-
Q psy5224 918 PGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--NFE- 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~~~- 993 (1178)
.+++++.+.++++++++.+++.. ..........+.++|+||++|+++|+.+++.|++.+|++.++|||.++.. +.+
T Consensus 22 l~~ll~~~~~a~k~i~~~v~~~~l~~~~g~~~~~n~~gd~vt~~D~~ae~~i~~~L~~~~p~~~i~sEE~~~~~~~~~~~ 101 (332)
T 2gq1_A 22 LTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCE 101 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC----------------------HHHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCccHHHHHHHHHHHHHHHHHHhhCCCCEEEeCCCCCCcCCCCCC
Confidence 44577888888888888887755 21112223344578999999999999999999999999999999987532 234
Q ss_pred -CccEEEEeccCCchHHhccCCC---eEEEEE------------EEECCeEEEEE---EEecCCCcEEEEecCCce--EE
Q psy5224 994 -NENIWIIDPLDNITNFSHNFPQ---YCISIA------------LKQKKQITHSV---IYDPIRNDLFTAIKGCGA--YL 1052 (1178)
Q Consensus 994 -~~~~wvIDPIDGT~nf~~g~p~---~~i~ia------------l~~~g~pv~gv---V~~P~~~~~~~a~~g~ga--~~ 1052 (1178)
++++|++||||||+||.+|.|. |||+++ +.++|++++|+ +|.|.++++|++ |+|+ |.
T Consensus 102 ~~~~~wiiDPLDGTsNf~~g~p~Gtif~I~ia~~~~~~~~~~~~l~~~G~~~vaagy~vy~p~~~~~~~~--G~Ga~~f~ 179 (332)
T 2gq1_A 102 HAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTT--GCGVHAFT 179 (332)
T ss_dssp TCCEEEEEEEEETGGGGGGTCCEEEEEEEEECCSCTTSCCCHHHHCCCGGGCSEEEEEEESSSEEEEEES--SSCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHhcCCCCccEEEEEEeeccCCcccchHHhhcCCeeEEEEEEEEEcccccEEEEE--CCceeEEE
Confidence 6799999999999999999999 999996 56778888764 899999977775 7777 85
Q ss_pred -c---CeecccCCC--CCCCCcEEEeccCCCCCCChHHHHHHHHHHhh-------cCCccccchHHHhHHHHHc-cccCE
Q psy5224 1053 -N---EKRIRVNKR--NKINDALIGTDFSFKNNINSEEYAKIFQIITK-------CKNLRNIGTSSLNLAYVAS-GKLDG 1118 (1178)
Q Consensus 1053 -n---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~r~~Gs~~~~~~~va~-G~~d~ 1118 (1178)
| |+.+.+.++ .+.+...++++.+....+. +...+..+.... ..++|+.||+++++++++. |..+.
T Consensus 180 ld~~~g~~~l~~~~i~i~~~~~~~a~~~~~~~~~~-~~~~~~i~~l~~~~~~~~~~~~~R~~GS~a~dl~~v~~~gG~~~ 258 (332)
T 2gq1_A 180 YDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFP-NGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYL 258 (332)
T ss_dssp EETTTTEEEEEEEEECCCSSCCEEECCGGGGGGSC-HHHHHHHHHHTSCBGGGTBSCEECCCSCHHHHHHHHHHHCCEEE
T ss_pred ecCCCCeeeeccCccccCCCCcEEEecCchhcccc-HHHHHHHHHHHhhccccCCcCCEEEeHhHHHHHHHHHHhCCEEE
Confidence 4 533322211 1224556776654333233 233344433322 4578999999999998884 54444
Q ss_pred EEec------CCC-ccchHHHHHHHHHcCCcccccCCCC-----CCC-CCCcEEEeChHHHHHHHHHHhhhc
Q psy5224 1119 FFEK------GLK-PWNIAAGSLLIIESGGIISNFKGEK-----NYL-YTGDIVAGNQKIFSQIISLINLNK 1177 (1178)
Q Consensus 1119 ~~~~------~~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~-~~~~iva~~~~l~~~l~~~l~~~~ 1177 (1178)
|... +++ +||++|+.+|+|||||.++|.+|+. ... .+..+++++++.|+++++.++++.
T Consensus 259 ~~~d~~~~~GkLrl~~d~aa~~lIveeAGG~~td~~g~~ldi~p~~~~~r~~i~~gs~~~v~~~~~~~~~~~ 330 (332)
T 2gq1_A 259 YPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFP 330 (332)
T ss_dssp ECCCSSSTTCSSBTTTTHHHHHHHHHHTTCEEESSSSBGGGCCCCSTTCBCCEEEESHHHHHHHHHHHHHSC
T ss_pred EEeeccCcCCCcChHHHHHHHHHHHHhCCCEEECCCCCccccCCcccccCceEEEECHHHHHHHHHHHHhcC
Confidence 4432 266 7999999999999999999999973 323 234688999999999999998764
|
| >2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human fbpase, benzoxazole, intersubunit allosteric inhibition of human fpbase, hydrolase; HET: A37; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=236.43 Aligned_cols=252 Identities=10% Similarity=0.176 Sum_probs=170.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC--CCC-
Q psy5224 918 PGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT--NFE- 993 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~--~~~- 993 (1178)
...+++...+++++.++.+++.. ..........+.++|.+++.|+.+|+++.+.|++.+|.+.+++||.++.. +.+
T Consensus 67 l~~ll~~i~~a~k~I~~~v~~a~l~~~~g~~~~~N~~Gd~qkklDv~an~~~i~~L~~~~~~~~i~SEE~~~~~~~~~~~ 146 (374)
T 2fhy_A 67 LTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEK 146 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTHHHHTTSSCC---------CHHHHHHHHHHHHHHTTTCEEEEEETTCSSCEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCchhhHHHHHHHHHHHHHHHhcCCceEEEeCCCCcccccCCCC
Confidence 34455555555555555555431 00111223345678999999999999999999999999999999987642 223
Q ss_pred -CccEEEEeccCCchHHhccCCCeEEEEEEEE--------------CCe--EEEE-EEEecCCCcEEEEecC--------
Q psy5224 994 -NENIWIIDPLDNITNFSHNFPQYCISIALKQ--------------KKQ--ITHS-VIYDPIRNDLFTAIKG-------- 1047 (1178)
Q Consensus 994 -~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~--------------~g~--pv~g-vV~~P~~~~~~~a~~g-------- 1047 (1178)
.+++|++||||||+|+..|.|. ++..++.+ +|+ +.+| ++|.|.+..+|+..+|
T Consensus 147 ~g~y~v~~DPLDGSSNid~n~sv-GtIFsI~~~~~~~~~~~~d~lq~G~~qvaAGYviYgp~t~lv~t~G~Gv~~Ftld~ 225 (374)
T 2fhy_A 147 RGKYVVCFDPLDGSSNIDCLVSV-GTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDP 225 (374)
T ss_dssp EEEEEEEEEEEESGGGGGGTCCE-EEEEEEEECCCSSCCCGGGGCCCGGGEEEEEEEEESSSEEEEEEETTEEEEEEEET
T ss_pred CCCeEEEEeCCCCchhhcCCCcc-ceEEEEEEecCCCccchhhhccCCccceEEEEEEEcccceEEEEeCCceeEEEEcC
Confidence 5789999999999999999985 35566664 455 5556 9999998888777544
Q ss_pred -CceE-EcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh------hcCCccccchHHHhHHHHHccccCEE
Q psy5224 1048 -CGAY-LNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT------KCKNLRNIGTSSLNLAYVASGKLDGF 1119 (1178)
Q Consensus 1048 -~ga~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~r~~Gs~~~~~~~va~G~~d~~ 1119 (1178)
.|.| +++++++++++. ...+.+.+....+. +..+++.+... +..++|..||.+.|+++++.+. +.|
T Consensus 226 ~~G~f~L~~~~i~ip~~~----~i~sin~~n~~~w~-~~~~~yi~~~~~~~~~~k~~~~Ry~GSmV~D~hrvL~~G-Gif 299 (374)
T 2fhy_A 226 AIGEFILVDKDVKIKKKG----KIYSLNEGYAKDFD-PAVTEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYG-GIF 299 (374)
T ss_dssp TTTEEEEEEEEECCCSSC----SEEECCGGGGGGCC-HHHHHHHHHHHSCTTSCCCCEECBCSCHHHHHHHHHHHC-CEE
T ss_pred CCCeEEecCCccccCCCC----cEEEeChhhhhccC-HHHHHHHHHhhhccccccccceeEechhHHHHHHHHhcC-cEE
Confidence 5555 467778776533 45555433333333 33444444332 3567999999999999997644 555
Q ss_pred EecC--------CC-ccchHHHHHHHHHcCCcccccCCC-----CCCCCCC-cEEEeChHHHHHHHHHHhhh
Q psy5224 1120 FEKG--------LK-PWNIAAGSLLIIESGGIISNFKGE-----KNYLYTG-DIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1120 ~~~~--------~~-~wD~aA~~~i~~eaGg~v~d~~G~-----~~~~~~~-~iva~~~~l~~~l~~~l~~~ 1176 (1178)
..+. ++ .||++|+..|+|+|||.++|.+|+ |...+.+ .++.++++.++++.+.++++
T Consensus 300 ~yP~D~~~~~GKLRllyE~aP~a~IvEqAGG~atdg~~~iLdi~p~~lhqR~pv~~GS~~eV~~~~~~~~~~ 371 (374)
T 2fhy_A 300 LYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKH 371 (374)
T ss_dssp EECCCSSCTTCSEETTTTHHHHHHHHHHTTCEEECSSSBTTTCCCSSTTCEECEEEESHHHHHHHHHHHHTC
T ss_pred EccccccCcCCcchhHhHHhHHHHHHHHcCCEEecCCCcccccCCCcccccceEEEECHHHHHHHHHHHHhc
Confidence 5432 22 599999999999999999999994 4444333 57799999999999988764
|
| >1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis, redox regulation, thioredoxin, allostery, hydrolase; 2.20A {Pisum sativum} SCOP: e.7.1.1 PDB: 1d9q_A 1dbz_A 1spi_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-20 Score=203.90 Aligned_cols=249 Identities=13% Similarity=0.117 Sum_probs=169.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC----C
Q psy5224 918 PGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN----F 992 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~----~ 992 (1178)
...+++....++++.+..+++.. ..........+..+|.+++.|..+|+++.+.|++.+|.+.+.+||.++... .
T Consensus 38 l~~ll~~i~~A~k~Ia~~v~~a~l~~~~g~~g~~N~~Gd~qkkLDv~an~i~~~~L~~~~~~~~iaSEE~~~~~~~~~~~ 117 (357)
T 1dcu_A 38 LTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY 117 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--------CHHHHHHHHHHHHHHHHTTTTEEEEEECCCSSCCCEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCChhHHHHHHHHHHHHHHHHhcCCceEEEcCCCCcccccccCC
Confidence 33455555555555555555531 111122233455789999999999999999999999999999999876431 2
Q ss_pred CCccEEEEeccCCchHHhccCCCeEEEEEEE-------------------------------ECCeEEEE---EEEecCC
Q psy5224 993 ENENIWIIDPLDNITNFSHNFPQYCISIALK-------------------------------QKKQITHS---VIYDPIR 1038 (1178)
Q Consensus 993 ~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~-------------------------------~~g~pv~g---vV~~P~~ 1038 (1178)
..+++|++||||||+|+..+.|..++ .+++ +.|+..+| ++|.|.+
T Consensus 118 ~g~y~v~fDPLDGSSNid~n~svGTI-F~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lq~G~~~vaAGY~lYgp~t 196 (357)
T 1dcu_A 118 SGNYIVVFDPLDGSSNLDAAVSTGSI-FGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSV 196 (357)
T ss_dssp TSSCEEEEESSSCSCSGGGSSCEEEE-EEEECCSSCSCC--------CBCCHHHHHHHHHHCCTTTTEEEEEEEEESSSE
T ss_pred CCCeEEEEeCCCChHHhhcCCcceEE-EEEEecCCCccccccccccccccchhhcchhhhhccCCceeEEEEEEEEccce
Confidence 46799999999999999999995555 6666 24455544 9999999
Q ss_pred CcEEEEecCCceEE-c---------CeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHH------hhcCCccccc
Q psy5224 1039 NDLFTAIKGCGAYL-N---------EKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQII------TKCKNLRNIG 1102 (1178)
Q Consensus 1039 ~~~~~a~~g~ga~~-n---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~r~~G 1102 (1178)
..+|+..+|...|. | +++++.++ +....+.+.+....++ +..+++.+.. .+....|..|
T Consensus 197 ~lv~t~g~Gv~~Ftld~~~Gef~lt~~~i~ip~----~~~iysin~~n~~~w~-~~~~~yi~~~~~~~~~~~~y~~RyiG 271 (357)
T 1dcu_A 197 IFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPK----SGKIYSFNEGNYKLWD-ENLKKYIDDLKEPGPSGKPYSARYIG 271 (357)
T ss_dssp EEEEESSSCEEEEEEETTTTEEEEEESSCCCCS----CCSEEECCGGGGGGSC-HHHHHHHHHHHSCCTTSCCCEECBCS
T ss_pred EEEEEeCCCEEEEEEcCCCCeEEEeCCceeECC----CCcEEEECCcchhhcC-HHHHHHHHHHhhcCCCCCCCcceEec
Confidence 99999877754444 2 23344433 3345665544333333 4455555444 2346789999
Q ss_pred hHHHhHHHHHccccCEEEecC--------CC-ccchHHHHHHHHHcCCcccccCCC-----CCCCCC-CcEEEeChHHHH
Q psy5224 1103 TSSLNLAYVASGKLDGFFEKG--------LK-PWNIAAGSLLIIESGGIISNFKGE-----KNYLYT-GDIVAGNQKIFS 1167 (1178)
Q Consensus 1103 s~~~~~~~va~G~~d~~~~~~--------~~-~wD~aA~~~i~~eaGg~v~d~~G~-----~~~~~~-~~iva~~~~l~~ 1167 (1178)
|.+.|+++++.+. +.|.++. ++ .||.+|...|+|+|||.++|-..+ |...+. ..++.++++-.+
T Consensus 272 SmV~DvhriL~~G-Gif~yP~d~~~p~GKLRllyE~aPma~ivEqAGG~asdG~~~iLdi~p~~lHqR~p~~~GS~~eV~ 350 (357)
T 1dcu_A 272 SLVGDFHRTLLYG-GIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVE 350 (357)
T ss_dssp CHHHHHHHHHHHC-CEEEECCCSSSTTCSSBTTTTHHHHHHHHHHTTCEEESSSSBGGGSCCCSTTCBCCEEEECHHHHH
T ss_pred ccHHHHHHHHhcC-eEEEccccccCCCcchhhHhhhhhHHHHHHHcCCEEecCCccccccCCCcccccCCeEEeCHHHHH
Confidence 9999999999877 8887654 22 599999999999999999986543 222232 357789988888
Q ss_pred HHHHHH
Q psy5224 1168 QIISLI 1173 (1178)
Q Consensus 1168 ~l~~~l 1173 (1178)
++.+.+
T Consensus 351 ~~~~~~ 356 (357)
T 1dcu_A 351 KVEKYL 356 (357)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 887654
|
| >3big_A Fructose-1,6-bisphosphatase class II GLPX; carbohydrate metabolism, hydrolase manganese; 1.85A {Escherichia coli} PDB: 2r8t_A 3bih_A 1ni9_A 3d1r_A* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.063 Score=57.64 Aligned_cols=174 Identities=9% Similarity=0.034 Sum_probs=98.4
Q ss_pred cHHHHHHHHHHHHHHHhcCC-CCeEEeeccCCcC-----------CCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTYP-SYAFLIKKSNYLT-----------NFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~p-~~~iigEE~~~~~-----------~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
.++|.++-+..++.|.+..= +.-++||.+-++. +..++.-.-|||+|||+--++|.|.--..+|..++
T Consensus 32 ~~AD~AAV~AMR~~ln~v~~~G~VVIGEGE~DeAPMLyiGE~VG~G~gp~vDIAVDPlEGT~l~A~g~~nAiaVlA~a~r 111 (338)
T 3big_A 32 NTADGAAVNAMRIMLNQVNIDGTIVIGEGEIAEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDK 111 (338)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEEEESSBCTTTCSSSBTTCEESCSCSCEEEEEEEEEETHHHHHTTCSCCEEEEEEEET
T ss_pred HHHHHHHHHHHHHHhccCCcceEEEeCCCCCCCCcccccCccccCCCCCceeEEEcCccchhhhhCCCCCCEEEEEecCC
Confidence 47899999999999987532 3455676442211 11235668899999999999999999999999998
Q ss_pred CeEEEEEEEecCC--CcEEEEecCCceEEcCe-------ecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcC
Q psy5224 1026 KQITHSVIYDPIR--NDLFTAIKGCGAYLNEK-------RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK 1096 (1178)
Q Consensus 1026 g~pv~gvV~~P~~--~~~~~a~~g~ga~~n~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1178)
|.- .+.|.. +.+..+-.-+|..--+. .+.....+++++-.+..- +++++++..++.. +...
T Consensus 112 G~l----l~aPd~YMeKiaVGp~a~g~Idl~~p~~~Nl~~vA~a~gk~v~dltV~vL---dRpRH~~lI~eiR---~~GA 181 (338)
T 3big_A 112 GCF----LNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVTIL---AKPRHDAVIAEMQ---QLGV 181 (338)
T ss_dssp TCB----CCCCSSEEEEEEECGGGTTCCCTTSCHHHHHHHHHHHHTSCGGGCEEEEE---CSGGGHHHHHHHH---HHTC
T ss_pred CCC----CCCcccceecccCCcccCCeeCCCCCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHHHHHHHH---HcCC
Confidence 842 233421 11222112223221111 222223444555554443 2233333333332 2233
Q ss_pred Cccc--cchHHHhHHH--HHccccCEEEecCCCccchHHHHHHHHHcCCcc
Q psy5224 1097 NLRN--IGTSSLNLAY--VASGKLDGFFEKGLKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1097 ~~r~--~Gs~~~~~~~--va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v 1143 (1178)
++|. -|- ...... .-....|.|+..+-.|--+.+ +.-+|..||..
T Consensus 182 rI~li~DGD-Va~ai~~~~~~sgvD~~~GiGGAPEGVla-AaAlkclGG~m 230 (338)
T 3big_A 182 RVFAIPDGD-VAASILTCMPDSEVDVLYGIGGAPEGVVS-AAVIRALDGDM 230 (338)
T ss_dssp EEEEESSCS-HHHHHHTTCTTSSCCEEEEEEEHHHHHHH-HHHHHHHTCEE
T ss_pred eEEEeCCcc-HHHHHHHhcCCCCeeEEEECCCChHHHHH-HHHHHhCCceE
Confidence 4443 332 222222 245789999987777777765 44568888876
|
| >3roj_A D-fructose 1,6-bisphosphatase class 2/sedoheptulo bisphosphatase; fructose-1,6-/sedoheptulose-1,7-bisphosphatase, hydrolase; HET: AMP GOL; 2.30A {Synechocystis} PDB: 3rpl_A* | Back alignment and structure |
|---|
Probab=92.16 E-value=0.46 Score=51.70 Aligned_cols=199 Identities=11% Similarity=0.027 Sum_probs=108.2
Q ss_pred cHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCC-CCeEEeeccCCc---------C
Q psy5224 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYP-SYAFLIKKSNYL---------T 990 (1178)
Q Consensus 921 ~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p-~~~iigEE~~~~---------~ 990 (1178)
+.-+..+..++|+...-+...+ .| ...+|.++-+..++.|.+..= +.-++||.+-++ -
T Consensus 39 LalelvRVTEaAAlAa~rw~Gr---------GD---K~~AD~AAVdAMR~~ln~v~m~G~VVIGEGE~DeAPMLYiGE~V 106 (379)
T 3roj_A 39 LGLEIIEVVEQAAIASAKWMGK---------GE---KNTADQVAVEAMRERMNKIHMRGRIVIGEGERDDAPMLYIGEEV 106 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTS---------SC---HHHHHHHHHHHHHHHHTTSSCEEEEEESSCCTTTCSSSCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC---------Cc---hhHHHHHHHHHHHHHhccCCcceEEEeCCCccCCCCccccCcee
Confidence 3334455555555555443322 22 247899999999999987532 334556643211 1
Q ss_pred --CC--------CC----ccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCC--CcEEEEecCCceEEcC
Q psy5224 991 --NF--------EN----ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIR--NDLFTAIKGCGAYLNE 1054 (1178)
Q Consensus 991 --~~--------~~----~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~--~~~~~a~~g~ga~~n~ 1054 (1178)
.. .+ +.-.-|||+|||+.-++|.|.--..+|..++|.- .+.|.. +.+..+-.-+|..--+
T Consensus 107 G~G~~~~~~~~~gp~~~~~vDIAVDPlEGT~l~A~G~pnAiaVlA~A~rG~l----l~aPd~YMeKiaVGP~a~g~IdLd 182 (379)
T 3roj_A 107 GICTREDAKSFCNPDELVEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGL----FAAPDFYMKKLAAPPAAKGHVDID 182 (379)
T ss_dssp SGGGSTTHHHHSCTGGGSEEEEEEEEEETHHHHHHTCSCCEEEEEEEETTCS----CCCCSCEEEEEEECGGGTTTSCTT
T ss_pred cCCcccccccccCCCcCcceeEEEccccCcccccCCCCCcEEEEEEcCCCCc----ccCchhhceeeeECcccCCeecCC
Confidence 11 23 4567899999999999999999999999998842 233421 1111111112222111
Q ss_pred e-------ecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccc--cchHHHhHHHHHc--cccCEEEecC
Q psy5224 1055 K-------RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRN--IGTSSLNLAYVAS--GKLDGFFEKG 1123 (1178)
Q Consensus 1055 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~--~Gs~~~~~~~va~--G~~d~~~~~~ 1123 (1178)
. .+.....+++++-++..- +++++++..++.. +...++|. -| +.......+. ...|.|+..+
T Consensus 183 ~p~~eNl~~vA~Al~k~v~dltV~vL---DRPRH~~lI~eiR---~~GARV~LI~DG-DVa~ai~~~~~~sgvD~~mGiG 255 (379)
T 3roj_A 183 KSATENLKILSDCLNRSIEELVVVVM---DRPRHKELIQEIR---NAGARVRLISDG-DVSAAISCAFSGTNIHALMGIG 255 (379)
T ss_dssp SCHHHHHHHHHHHTTSCGGGCEEEEE---CCGGGHHHHHHHH---HHTCEEEEESSC-HHHHHHHTTSBTSSCCEEEEEE
T ss_pred CCHHHHHHHHHHHcCCChhHeEEEEE---cCchHHHHHHHHH---HcCCeEEEeCcC-cHHHHHHHhcCCCCeeEEEECC
Confidence 1 122233445555555443 2233333333332 22334443 34 3333333333 5589999877
Q ss_pred CCccchHHHHHHHHHcCCcc
Q psy5224 1124 LKPWNIAAGSLLIIESGGII 1143 (1178)
Q Consensus 1124 ~~~wD~aA~~~i~~eaGg~v 1143 (1178)
-.|--+.+ ++-+|..||..
T Consensus 256 GAPEGVla-AaAlkclGG~m 274 (379)
T 3roj_A 256 AAPEGVIS-AAAMRCLGGHF 274 (379)
T ss_dssp EHHHHHHH-HHHHHHHTCEE
T ss_pred CChHHHHH-HHHHHhcCCce
Confidence 66766665 45578888877
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1178 | ||||
| d2hhma_ | 272 | e.7.1.1 (A:) Inositol monophosphatase {Human (Homo | 1e-33 | |
| d1inpa_ | 400 | e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase | 1e-27 | |
| d1jp4a_ | 304 | e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxI | 9e-26 | |
| d1ka1a_ | 354 | e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP p | 1e-21 | |
| d1vdwa_ | 253 | e.7.1.1 (A:) Archaeal inositol monophosphatase/fru | 2e-21 | |
| d1lbva_ | 252 | e.7.1.1 (A:) Archaeal inositol monophosphatase/fru | 1e-19 | |
| d1xi6a_ | 249 | e.7.1.1 (A:) Archaeal inositol monophosphatase/fru | 5e-18 | |
| d1g0ha_ | 252 | e.7.1.1 (A:) Archaeal inositol monophosphatase/fru | 1e-14 |
| >d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol monophosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 1e-33
Identities = 57/252 (22%), Positives = 121/252 (48%), Gaps = 7/252 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKIL---FNTYPSYAF 981
A+ AR++ ++ N+ + + V ++ EK++ + + ++
Sbjct: 8 AVTLARQAGEVVCEAIKNEMNVM-LKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGE 66
Query: 982 LIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDL 1041
+ + + WIIDP+D TNF H FP +SI K+I V+Y + +
Sbjct: 67 ESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKM 126
Query: 1042 FTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF---KNNINSEEYAKIFQIITKCKNL 1098
+TA KG GA+ N ++++V+++ I +L+ T+ + +
Sbjct: 127 YTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGI 186
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDI 1158
R++GT+++N+ VA+G D ++E G+ W++A +++ E+GG++ + G L + +
Sbjct: 187 RSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRV 246
Query: 1159 VAGNQKIFSQII 1170
+A N +I ++ I
Sbjct: 247 IAANNRILAERI 258
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} Length = 400 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Score = 114 bits (286), Expect = 1e-27
Identities = 25/198 (12%), Positives = 47/198 (23%), Gaps = 39/198 (19%)
Query: 993 ENENIWIIDPLDNITNFSHNFPQYC----------------ISIALKQKKQITHSVIYDP 1036
++ +DP+D+ + I + Q VI P
Sbjct: 145 QDILGIWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQP 204
Query: 1037 IRNDLFT----------AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNIN----- 1081
+ + G ++ V+ R+ GT
Sbjct: 205 FVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRFSVV 264
Query: 1082 -----SEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGF--FEKGLKPWNIAAGSL 1134
E + + R G + V G D + E W+ A
Sbjct: 265 ISTSEKETIKGALSHVCGERIFRAAG-AGYKSLCVILGLADIYIFSEDTTFKWDSCAAHA 323
Query: 1135 LIIESGGIISNFKGEKNY 1152
++ GG + + K
Sbjct: 324 ILRAMGGGMVDLKECLER 341
|
| >d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 304 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: PIPase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 107 bits (266), Expect = 9e-26
Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 39/289 (13%)
Query: 924 EAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFL- 982
A A+K+ I+ E + ++ + ++ + I L +P +
Sbjct: 10 SAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIG 69
Query: 983 -------------------------IKKSNYLTNFENENIWIIDPLDNITNFSHNF-PQY 1016
S Y E + + +DP+D ++
Sbjct: 70 EEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNV 129
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076
+ I + + + +I P N G + ++ +A G
Sbjct: 130 TVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHIIT 189
Query: 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDG--FFEKGLKPWNIAAGSL 1134
+S + N+ +G + + + GK F G K W+ A +
Sbjct: 190 TTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAPEV 249
Query: 1135 LIIESGGIISNFKGEK-------NYLYTGDIVAGN---QKIFSQIISLI 1173
++ GG +++ G ++ + ++A + S++ +
Sbjct: 250 ILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNYEYYASRVPESV 298
|
| >d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 354 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: 3';5'-adenosine bisphosphatase, PAP phosphatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 95.6 bits (236), Expect = 1e-21
Identities = 47/299 (15%), Positives = 98/299 (32%), Gaps = 49/299 (16%)
Query: 921 YIVEAIKAARKSALII-----NRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNT 975
I+ AIK+ ++ + S + E K + V+N N + +
Sbjct: 54 IIINAIKSNFPDDKVVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFP 113
Query: 976 YPSYAFLIKKSNY--LTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVI 1033
S + + ++ W +DP+D F + + +AL + I
Sbjct: 114 LKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGEQ-FAVCLALIVDGVVQLGCI 172
Query: 1034 YDPIRND----------------LFTAIKGCGAYLNE-------KRIRVNKRNKINDALI 1070
P +F A++G GA+ + +I V D +
Sbjct: 173 GCPNLVLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMIT 232
Query: 1071 GTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASG------KLDGFFEKGL 1124
++ + E+ A ++ S +A G +L
Sbjct: 233 LEGVEKGHSSHDEQTAIKNKLNISK---SLHLDSQAKYCLLALGLADVYLRLPIKLSYQE 289
Query: 1125 KPWNIAAGSLLIIESGGIISNFKGEKNYLYT--------GDIVA-GNQKIFSQIISLIN 1174
K W+ AAG++++ E+GGI ++ + + G I + G +++ ++S
Sbjct: 290 KIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTSC 348
|
| >d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 253 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 92.8 bits (229), Expect = 2e-21
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 24/259 (9%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI R I + ++K +E II + + ++
Sbjct: 9 AIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGVN---VV 65
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
+ + ++ ++DPLD NF + P + +S+A+ +K ++ IY+PI L+
Sbjct: 66 SEEIGRIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIVERLYE 125
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
I G G+YLN ++I+V + + K +I+ K +II K K R +G
Sbjct: 126 GIPGKGSYLNGEKIKVRELAE------------KPSISFYTKGKGTKIIDKVKRTRTLGA 173
Query: 1104 SSLNLAYVASGKLDGFFEKG--LKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD---- 1157
+L LAY+A G LD + L+P +IAAG ++ E+G I+ + G+ +
Sbjct: 174 IALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKV 233
Query: 1158 --IVAGNQKIFSQIISLIN 1174
I A N+++ I+ I
Sbjct: 234 NIIAANNEELLETILRSIE 252
|
| >d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 87.8 bits (216), Expect = 1e-19
Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 35/266 (13%)
Query: 924 EAIKAARKSALIINRGSLELEN----LRFEEKKYENFVFNINKASEKIITKILFNTYPSY 979
+A++ +R+ A + + + K ++ +E +IL +
Sbjct: 5 DALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEILRKERVTV 64
Query: 980 AFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRN 1039
E + +DPLD N + P Y +S+ ++ +
Sbjct: 65 VT----EESGVLGEGDVFVALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVYNL 120
Query: 1040 DL--FTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKN 1097
GAY N +RI V+ ++ I K K
Sbjct: 121 ATGDEYYADSSGAYRNGERIEVSDAEELYCNAIIYYPDRKFP---------------FKR 165
Query: 1098 LRNIGTSSLNLAYVASGKLDGFF----EKGLKPWNIAAGSLLIIESGGIISNFKGE---- 1149
+R G+++ L + A G D F K L+ ++ AAG + ++GG ++ GE
Sbjct: 166 MRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLGN 225
Query: 1150 --KNYLYTGDIVAGNQKIFSQIISLI 1173
+ +IVA N+K+ +++ LI
Sbjct: 226 KKFDMQERLNIVAANEKLHPKLLELI 251
|
| >d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 249 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Pyrococcus furiosus [TaxId: 2261]
Score = 82.8 bits (203), Expect = 5e-18
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI I + + + ++K +E +I + +
Sbjct: 9 AIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELGVNVVS-- 66
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
+ + + E+E I+DPLD NF P + +S+A+ +K + +++IY+P+ F
Sbjct: 67 -EEVGVIDNESEYTVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFE 125
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
I G GA+LN KRI+V K ++ +I+ K R +G
Sbjct: 126 GIPGEGAFLNGKRIKVRKTPDEKPSISFYSRGKG-----------HEIVKHVKRTRTLGA 174
Query: 1104 SSLNLAYVASGKLDGFFEKG--LKPWNIAAGSLLIIESGGIISNFKGE-----KNYLYTG 1156
+L LAY+A G LDG + ++P +IAAG+++ E+G +I + G+ N
Sbjct: 175 IALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATDRL 234
Query: 1157 DIVA-GNQKIFSQII 1170
D++A ++++ I+
Sbjct: 235 DVIAVNSEELLKTIL 249
|
| >d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 252 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 73.2 bits (178), Expect = 1e-14
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 21/258 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
A++ I + +K SE I K L + + ++
Sbjct: 7 GKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSLNVN---IV 63
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
+ + + +E +IDP+D NF + P + + + + + + Y+ + +
Sbjct: 64 SEELGVIDNSSEWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYE 123
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
A KG GAYLN ++I+V N N + + + ++ K K +R G
Sbjct: 124 AYKGKGAYLNGRKIKVKDFNPNNIV---------ISYYPSKKIDLEKLRNKVKRVRIFGA 174
Query: 1104 SSLNLAYVASGKLDGFFEKGLK--PWNIAAGSLLIIESGGIISNFKGE------KNYLYT 1155
L + YVA G LD F+ K +IA+ ++ E+G +I++ G+
Sbjct: 175 FGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRL 234
Query: 1156 GDIVAGNQKIFSQIISLI 1173
IVA ++++ I+ L+
Sbjct: 235 NIIVANSKEMLDIILDLL 252
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1178 | |||
| d2hhma_ | 272 | Inositol monophosphatase {Human (Homo sapiens) [Ta | 100.0 | |
| d1g0ha_ | 252 | Archaeal inositol monophosphatase/fructose-1,6-bis | 100.0 | |
| d1vdwa_ | 253 | Archaeal inositol monophosphatase/fructose-1,6-bis | 100.0 | |
| d1xi6a_ | 249 | Archaeal inositol monophosphatase/fructose-1,6-bis | 100.0 | |
| d1lbva_ | 252 | Archaeal inositol monophosphatase/fructose-1,6-bis | 100.0 | |
| d1ka1a_ | 354 | 3';5'-adenosine bisphosphatase, PAP phosphatase {B | 100.0 | |
| d1jp4a_ | 304 | PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} | 100.0 | |
| d1inpa_ | 400 | Inositol polyphosphate 1-phosphatase {Cow (Bos tau | 100.0 | |
| d1nuwa_ | 328 | Fructose-1,6-bisphosphatase {Pig (Sus scrofa) [Tax | 99.27 | |
| d1d9qa_ | 340 | Fructose-1,6-bisphosphatase {Garden pea (Pisum sat | 99.2 | |
| d1ni9a_ | 328 | Glycerol metabolism protein GlpX {Escherichia coli | 95.63 |
| >d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol monophosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=401.13 Aligned_cols=255 Identities=24% Similarity=0.473 Sum_probs=217.6
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceEEEecc-CcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc---CCCCC
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLRFEEKK-YENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL---TNFEN 994 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~-~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~---~~~~~ 994 (1178)
.++++.+++++++|++.+++.+++ ..+++.|+ +.|+||++|+++|+.|++.|++.+|++.|+|||.++. ...++
T Consensus 2 qe~l~~a~~~a~~ag~~i~~~~~~--~~~~~~k~~~~d~VT~aD~~~e~~i~~~L~~~~p~~~ii~EE~~~~~~~~~~~~ 79 (272)
T d2hhma_ 2 QECMDYAVTLARQAGEVVCEAIKN--EMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTD 79 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS--CCCEEESSSTTCEEEHHHHHHHHHHHHHHHHHCTTCEEEEHHHHHTTCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEcCCCCChhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhccccCC
Confidence 478999999999999999988765 34455564 5689999999999999999999999999999996532 33456
Q ss_pred ccEEEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEecc
Q psy5224 995 ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDF 1074 (1178)
Q Consensus 995 ~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~ 1074 (1178)
+++|+|||||||+||++|.|.||+++++.++++|+.|+||+|.++++|+|.+|+|+|+|+++.+++.+++.+...+....
T Consensus 80 ~~~WiiDPIDGT~nf~~g~p~~~isial~~~~~~~~gvi~~P~~~~~~~a~~G~Ga~~n~~~~~~~~~~~~~~~~~~~~~ 159 (272)
T d2hhma_ 80 NPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTEL 159 (272)
T ss_dssp SCEEEEEEEETHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTSCEEETTEECCCCCCCCGGGCEEECCC
T ss_pred CCEEEeccccccHHHHHhhhhheeeccccccCcccccceeccccCceEEEcCCcccccCCcccccccccchhhhheeeee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999888888877665
Q ss_pred CCCCCCCh--HHHHHHH-HHHhhcCCccccchHHHhHHHHHccccCEEEecCCCccchHHHHHHHHHcCCcccccCCCCC
Q psy5224 1075 SFKNNINS--EEYAKIF-QIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKN 1151 (1178)
Q Consensus 1075 ~~~~~~~~--~~~~~~~-~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~d~~G~~~ 1151 (1178)
+....... ....... ....+..++|+.||+++++|+||+|++|+|++.+.++||+|||.+|++||||.++|.+|+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~Gs~~l~~~~va~G~~d~~v~~~~~~wD~aAg~li~~eaGg~vtd~~G~~~ 239 (272)
T d2hhma_ 160 GSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPF 239 (272)
T ss_dssp CSCCCHHHHHHHHHHHHHHHTTTCSEEEBCSCHHHHHHHHHHTSSSEEEEESCCHHHHHHHHHHHHHTTCEEECTTSSCC
T ss_pred cccccchhhhhhhhhhhccccccccceeeechHHHHHHHhccCCeeEEeecCCChhhhHHHHHHHHHCCCeEECCCCCcc
Confidence 44322111 1111111 23335667999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEe-ChHHHHHHHHHHhh
Q psy5224 1152 YLYTGDIVAG-NQKIFSQIISLINL 1175 (1178)
Q Consensus 1152 ~~~~~~iva~-~~~l~~~l~~~l~~ 1175 (1178)
.+++++++|+ ++.+|+++++.++.
T Consensus 240 ~~~~~~ii~a~~~~~~~~l~~~l~~ 264 (272)
T d2hhma_ 240 DLMSRRVIAANNRILAERIAKEIQV 264 (272)
T ss_dssp CTTSSEEEEESSHHHHHHHHHHCCC
T ss_pred CCCCCcEEEECCHHHHHHHHHHhhh
Confidence 9999888875 55678999998865
|
| >d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=100.00 E-value=2.2e-43 Score=386.08 Aligned_cols=242 Identities=22% Similarity=0.312 Sum_probs=203.0
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEE-EeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRF-EEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~-~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
++-|.|.++|++|++.+++.+.+.+..++ ..|+++|+||++|+++|+.|++.|++ |++.|+|||.+... .+++++|
T Consensus 2 ~~~e~a~~~a~~a~~~i~~~f~~~~~~~~~~~~~~gd~vt~~D~~~e~~i~~~L~~--~~~~iisEE~~~~~-~~~~~~W 78 (252)
T d1g0ha_ 2 KWDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKS--LNVNIVSEELGVID-NSSEWTV 78 (252)
T ss_dssp CHHHHHHHHHHHHHHHHGGGTTCTTTCCEEEEETTTEEEEHHHHHHHHHHHHHHGG--GTSEEEEGGGEEEC-CCCSEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccccCceEeecCCCCcchHHHHHHHHHHHHHhhc--CCCccccccccccC-CCccceE
Confidence 35678999999999999998877655544 45568999999999999999999976 68999999987643 4678999
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+|||||||+||++|.|.||+++|+.++|+|+.|+|++|.++++|+|.+|+|+++|+++++++...+... .+.. .+...
T Consensus 79 viDPiDGT~nf~~g~~~~~v~ial~~~g~p~~gvv~~P~~~~~~~a~~g~ga~~ng~~i~~~~~~~~~~-~~~~-~~~~~ 156 (252)
T d1g0ha_ 79 VIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNI-VISY-YPSKK 156 (252)
T ss_dssp EEEEEECHHHHHTTCSCCEEEEEEEESSSEEEEEEEEGGGTEEEEEETTTCCEETTEECCCCCCCTTSC-EEEE-ECCTT
T ss_pred EEeeecchhhhhhhhhhhhceeEeeeecccceeeccccccccchhhccccccccccccccccccccccc-hhhc-ccccc
Confidence 999999999999999999999999999999999999999999999999999999999999877655433 2222 22211
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCCCC-
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT- 1155 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~- 1155 (1178)
. . ..+...+..++|..||+++++|+||+|++|+|++. +.++||+||+.+|++|+||.++|.+|+|+.++.
T Consensus 157 ~-~------~~~~~~~~~~~r~~Gs~~~~~~~vA~G~~d~~~~~~~~~~~WD~aA~~~I~~eaGG~vtd~~G~~l~~~~~ 229 (252)
T d1g0ha_ 157 I-D------LEKLRNKVKRVRIFGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLN 229 (252)
T ss_dssp C-C------HHHHHHHCSEECBCSCHHHHHHHHHTTSCSEEEECSSCCCHHHHHHHHHHHHTTTCEEECSSSSBCCCCCC
T ss_pred c-c------cchhhhcccccccccchhhhhccccccccceEEecCCCCCHHHHHHHHHHHHHCCCEEECCCCCcccCCCC
Confidence 1 1 12334466788999999999999999999999874 468999999999999999999999999976543
Q ss_pred -----CcEEEeChHHHHHHHHHH
Q psy5224 1156 -----GDIVAGNQKIFSQIISLI 1173 (1178)
Q Consensus 1156 -----~~iva~~~~l~~~l~~~l 1173 (1178)
+.++|+|+++|+++++.|
T Consensus 230 ~~~~~~~i~a~~~~l~~~ll~lL 252 (252)
T d1g0ha_ 230 ATDRLNIIVANSKEMLDIILDLL 252 (252)
T ss_dssp SSCCCCCEEESSHHHHHHHHTCC
T ss_pred cCcCCCEEEEcCHHHHHHHHhhC
Confidence 236688999999998764
|
| >d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=3.2e-43 Score=384.76 Aligned_cols=242 Identities=25% Similarity=0.368 Sum_probs=201.3
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceE-EEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccE
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLR-FEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENI 997 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~-~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~ 997 (1178)
.++.+.+.++++++++.+++.+++.+..+ ++.|+|+|+||++|+++|+.|++.|++. ++.|+|||.+... .+++++
T Consensus 3 ~~~~~~a~~la~~~~~~~~~~f~~~~~~~~~~~~~~~d~vt~~D~~~e~~i~~~L~~~--~~~ii~EE~~~~~-~~~~~~ 79 (253)
T d1vdwa_ 3 KTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDL--GVNVVSEEIGRID-QGSDYT 79 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTTCGGGGCEEEC-----CEEHHHHHHHHHHHHHHHHT--TCEEEETTTEEEC-CSCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccceeeecCCCCcccHHHHHHHHHHHHhhhhc--CCCcccccccccc-CCCCce
Confidence 45788999999999999999887765543 4567889999999999999999999884 6689999988644 467899
Q ss_pred EEEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCC
Q psy5224 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK 1077 (1178)
Q Consensus 998 wvIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1178)
|+|||||||+||++|.|+||++||++++|+|++|+|++|.++++|+|.+|+|+++|++++++++....+........
T Consensus 80 WiIDPIDGT~nf~~g~~~~~v~Ial~~~g~p~~gvv~~P~~~~~~~a~~g~g~~~n~~~i~~~~~~~~~~~~~~~~~--- 156 (253)
T d1vdwa_ 80 VVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIVERLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTKG--- 156 (253)
T ss_dssp EEEEEEECHHHHHTTCSCCEEEEEEEETTEEEEEEEEEGGGTEEEEEETTTEEEETTEEECCCCCCSSCEEEEECSS---
T ss_pred EEEeeccchhhHhhhhhhhheeeeeeeccceeeccccCcccccccccccCCccccCCCccccccccccchhhhhhcc---
Confidence 99999999999999999999999999999999999999999999999999999999999998876665443332221
Q ss_pred CCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCCCC
Q psy5224 1078 NNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT 1155 (1178)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~ 1155 (1178)
... ....+..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++||||.++|.+|+|+.++.
T Consensus 157 --~~~-------~~~~~~~~~r~~gs~~l~~~~va~G~~d~~~~~~~~~~~WD~aAg~~i~~eaGg~v~d~~G~~l~~~~ 227 (253)
T d1vdwa_ 157 --KGT-------KIIDKVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITF 227 (253)
T ss_dssp --CCH-------HHHHTCSEEEBCSCHHHHHHHHHHTSCSEEEEEEEEECHHHHHHHHHHHHHTTCEEECTTSSBCCCCS
T ss_pred --hhh-------hHHHHHhheeecccHHHhhhhhhhhhhheeeecccCCCHHHHhhHHHHHHHCCCEEECCCCCcccCCC
Confidence 111 122356788999999999999999999999864 468999999999999999999999999976653
Q ss_pred C-----cEE-EeChHHHHHHHHHHhh
Q psy5224 1156 G-----DIV-AGNQKIFSQIISLINL 1175 (1178)
Q Consensus 1156 ~-----~iv-a~~~~l~~~l~~~l~~ 1175 (1178)
. +++ |+|+++|+++++.+++
T Consensus 228 ~~~~~~~~iaa~n~~l~~~il~~i~k 253 (253)
T d1vdwa_ 228 SATEKVNIIAANNEELLETILRSIEK 253 (253)
T ss_dssp CSSCCEEEEEESCHHHHHHHHHTCCC
T ss_pred CcccCCCEEEECCHHHHHHHHHHhCC
Confidence 2 344 6799999999998875
|
| >d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=1.8e-42 Score=377.66 Aligned_cols=237 Identities=24% Similarity=0.366 Sum_probs=190.2
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceE-EEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLR-FEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIW 998 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~-~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~w 998 (1178)
.+.+.+++++++|++.+++.+++.+..+ ++.|+|+|+||++|+++|+.|++.|++.+| .|+|||.+.. ..+++++|
T Consensus 4 ~~~e~a~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~d~vt~aD~~ae~~i~~~L~~~~~--~iisEE~~~~-~~~~~~~w 80 (249)
T d1xi6a_ 4 FWREVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELGV--NVVSEEVGVI-DNESEYTV 80 (249)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTTCGGGGCCCC---------HHHHHHHHHHHHHHGGGTC--EEEETTTEEE-CCCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccCceEEecCCCCcchHHHHHHHHHHHHHHHhhcc--Ceeccccccc-ccCcceeE
Confidence 3567899999999999999887765444 455678999999999999999999999877 5999998764 44678999
Q ss_pred EEeccCCchHHhccCCCeEEEEEEEECCeEEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCC
Q psy5224 999 IIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 999 vIDPIDGT~nf~~g~p~~~i~ial~~~g~pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+|||||||+||++|.|+||+++|+.++|+|++|+|++|.++++|+|.+|.|+++|++++++++.+...............
T Consensus 81 iIDPIDGT~nf~~g~~~~~i~ial~~~g~p~~gvi~~P~~~~~~~a~~g~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T d1xi6a_ 81 IVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFEGIPGEGAFLNGKRIKVRKTPDEKPSISFYSRGKGH 160 (249)
T ss_dssp EEEEEESHHHHHHTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCC------CEEEECSSSCS
T ss_pred EEeecccchhhhhhhhhhcccchhhcccccccceEEecccccEEEeeCCCccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998877776666554433221
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHHHHHHHHHcCCcccccCCCCCCCCC-
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT- 1155 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~~- 1155 (1178)
. ...+..++|+.||+++++|+||+|++|+|++. +.++||+|||.+|++||||.++|.+|+|+.++.
T Consensus 161 ~-----------~~~~~~~~r~~gs~~~~~~~va~G~~d~~~~~~~~~~~wD~aAg~~i~~eaGg~v~d~~G~~l~~~~~ 229 (249)
T d1xi6a_ 161 E-----------IVKHVKRTRTLGAIALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFN 229 (249)
T ss_dssp S-----------SGGGSSCEECCSCHHHHHHHHHHTSCSEEEEEEEEECHHHHHHHHHHHHTTTCEEECSSSSBCCCCSC
T ss_pred c-----------hhcccceeeecCcHHHHhhHhhhhhheeeeeccCCCCHHHHHHHHHHHHHCCCEEECCCCCEecCCCC
Confidence 1 12356789999999999999999999999864 478999999999999999999999999966542
Q ss_pred ----CcEE-EeChHHHHHHH
Q psy5224 1156 ----GDIV-AGNQKIFSQII 1170 (1178)
Q Consensus 1156 ----~~iv-a~~~~l~~~l~ 1170 (1178)
..++ ++|+++|++++
T Consensus 230 ~~~~~~~iaa~~~~l~~~iL 249 (249)
T d1xi6a_ 230 ATDRLDVIAVNSEELLKTIL 249 (249)
T ss_dssp SCCCEEEEEESCHHHHHHHC
T ss_pred CCcCCcEEEECCHHHHHHhC
Confidence 2455 57799999874
|
| >d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=4.3e-42 Score=375.00 Aligned_cols=235 Identities=23% Similarity=0.296 Sum_probs=195.9
Q ss_pred ccHHHHHHHHHHHHHHHHhccccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCCCCCccEEE
Q psy5224 920 IYIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWI 999 (1178)
Q Consensus 920 ~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~~~~~~~wv 999 (1178)
+.++.+.+++.++.+.+.....+.+..++..|.|+|+||++|+++|+.+++.|++ |++.++|||.+.. .+++++|+
T Consensus 5 d~l~~a~~~a~ei~~~~~~~~~~~~~~~~~~~~d~spvT~aD~~~e~~i~~~L~~--~~~~i~~EE~~~~--~~~~~~Wi 80 (252)
T d1lbva_ 5 DALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEILRK--ERVTVVTEESGVL--GEGDVFVA 80 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHTCEEEECSSSSEEEHHHHHHHHHHHHHHTT--SSEEEEETTTEEE--ECCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhcceeeecCCcCcccHHHHHHHHHHHHHHhc--cCCCccccccCcc--cCCCceEE
Confidence 3455566666665555544333333457788999999999999999999999987 4568999998863 35689999
Q ss_pred EeccCCchHHhccCCCeEEEEEEEECCe---EEEEEEEecCCCcEEEEecCCceEEcCeecccCCCCCCCCcEEEeccCC
Q psy5224 1000 IDPLDNITNFSHNFPQYCISIALKQKKQ---ITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSF 1076 (1178)
Q Consensus 1000 IDPIDGT~nf~~g~p~~~i~ial~~~g~---pv~gvV~~P~~~~~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1178)
|||||||+||++|.|.||+++|+.++++ |++|+||+|.+|++|+| +|+|+++|++|+++++.+++....+......
T Consensus 81 iDPIDGT~nf~~g~p~f~v~ial~~~~~~~~pv~Gvi~~P~~~~~~~a-~~~ga~~n~~~i~vs~~~~~~~~~~~~~~~~ 159 (252)
T d1lbva_ 81 LDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVYNLATGDEYYA-DSSGAYRNGERIEVSDAEELYCNAIIYYPDR 159 (252)
T ss_dssp EEEEECHHHHHTTCSCCEEEEEEESSSBGGGEEEEEEEETTTCCEEEE-ETTEEEETTEEECCCCCCSSSSEEEEECCCS
T ss_pred eccccCceeeccccchhcceeeEEecccccCccchhhhhhhhhhhhhc-ccccccccCcccccccccchhhhhccccccc
Confidence 9999999999999999999999999976 99999999999999999 5889999999999999888777666544222
Q ss_pred CCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEecC----CCccchHHHHHHHHHcCCcccccCCCCCC
Q psy5224 1077 KNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG----LKPWNIAAGSLLIIESGGIISNFKGEKNY 1152 (1178)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~~----~~~wD~aA~~~i~~eaGg~v~d~~G~~~~ 1152 (1178)
. .+..++|..||+++++|+||+|++|+|++.+ .++||+|||.+|++||||.++|.+|+|+.
T Consensus 160 ~---------------~~~~~~r~~Gs~~~~~~~vA~G~~d~yi~~~~~~~~~~WD~aAg~~I~~eAGG~vtd~~G~~l~ 224 (252)
T d1lbva_ 160 K---------------FPFKRMRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLG 224 (252)
T ss_dssp C---------------CCCSEEEBCSCHHHHHHHHHTTSSSEEEECCSSCCBCHHHHHHHHHHHHHTTCEEECTTSCCCT
T ss_pred c---------------chhhheeehhhHHHHhhhhhhhhcchhhhccCcccCcHHHHHHHHHHHHHCCCEEECCCCCCCc
Confidence 1 1234689999999999999999999999754 57899999999999999999999999965
Q ss_pred CC------CCcEEEeChHHHHHHHHHHh
Q psy5224 1153 LY------TGDIVAGNQKIFSQIISLIN 1174 (1178)
Q Consensus 1153 ~~------~~~iva~~~~l~~~l~~~l~ 1174 (1178)
++ ++.++|+|+++|+++++.+|
T Consensus 225 ~~~~~~~~~~~iia~n~~l~~~ll~~lr 252 (252)
T d1lbva_ 225 NKKFDMQERLNIVAANEKLHPKLLELIK 252 (252)
T ss_dssp TCBSSSCCCBCEEEECTTTHHHHHHHHC
T ss_pred CCcccccCCCEEEEECHHHHHHHHHHhC
Confidence 43 34588999999999999875
|
| >d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: 3';5'-adenosine bisphosphatase, PAP phosphatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-41 Score=390.20 Aligned_cols=254 Identities=19% Similarity=0.261 Sum_probs=205.3
Q ss_pred ccccHHHHHHHHHHHHHHHHhcccc---ccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc-----
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSLE---LENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL----- 989 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~~---~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~----- 989 (1178)
+++.++.|++++|+|+.++++.+++ .++.++..|+|+||||+||+++|+.|++.|++.||++.|+|||+.+.
T Consensus 2 ~~~el~~a~~a~~~A~~l~~~~~~~~~~~~~~~~~~K~D~spVT~AD~~~e~~I~~~L~~~fP~~~ivGEE~~~~~~~~~ 81 (354)
T d1ka1a_ 2 LERELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNFPDDKVVGEESSSGLSDAF 81 (354)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEECTTSCEEEHHHHHHHHHHHHHHHHHCTTCCEEESCCCTTCCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCceeECCCCCchhHHHHHHHHHHHHHHHHHCCCCEEEeCCCCccccccc
Confidence 4678999999999999999876533 24566778999999999999999999999999999999999997432
Q ss_pred ------------------------------------------------CCCCCccEEEEeccCCchHHhccCCCeEEEEE
Q psy5224 990 ------------------------------------------------TNFENENIWIIDPLDNITNFSHNFPQYCISIA 1021 (1178)
Q Consensus 990 ------------------------------------------------~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ia 1021 (1178)
.+.+++++|+|||||||+||++| |.|||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~WiIDPIDGT~nFi~G-~~~~v~Ia 160 (354)
T d1ka1a_ 82 VSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFLRG-EQFAVCLA 160 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCCSCCSSSCCCSHHHHHHHHHTTBCCCCSSSEEEEEEEEETHHHHHTT-SCCEEEEE
T ss_pred ccchhcccccccccccccccccccccccccccccchhhhhhhcccccccCCCCCcEEEEeCCcChHHhhcc-Cchheeee
Confidence 23346789999999999999999 99999999
Q ss_pred EEECCeEEEEEEEecCC----------------CcEEEEecCCceEEcC-------eecccCCCCCCCCcEEEeccCCCC
Q psy5224 1022 LKQKKQITHSVIYDPIR----------------NDLFTAIKGCGAYLNE-------KRIRVNKRNKINDALIGTDFSFKN 1078 (1178)
Q Consensus 1022 l~~~g~pv~gvV~~P~~----------------~~~~~a~~g~ga~~n~-------~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1178)
+.++|+|++||||+|.+ |++|+|.+|+|+++|+ ++++++..++..+..+....+...
T Consensus 161 l~~~g~pv~GvI~~P~~~~~~~~~~~~~~~~~~g~l~~A~~G~Ga~~n~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~ 240 (354)
T d1ka1a_ 161 LIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGH 240 (354)
T ss_dssp EEETTEEEEEEEEETTCCGGGGTCCCCTTHHHHCEEEEEETTSCEEEEETTTCSSCEECCCCCCSCGGGCEEEECSCTTT
T ss_pred eeeccccceEEEecCccceeeeccccccccccceeeEeeecCCceeecCcccccccceeeeccCCChHHccccccccccc
Confidence 99999999999999986 5799999999999986 578888888888887776654322
Q ss_pred CCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec------CCCccchHHHHHHHHHcCCccccc-CCCCC
Q psy5224 1079 NINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK------GLKPWNIAAGSLLIIESGGIISNF-KGEKN 1151 (1178)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~------~~~~wD~aA~~~i~~eaGg~v~d~-~G~~~ 1151 (1178)
......... ....+..+.++.|| ++++|+||+|+.|+|++. +.++||+||+.+|++||||.++|. +|+|+
T Consensus 241 -~~~~~~~~~-~~~~~~~~~~~~gs-~~~~~~va~G~~d~y~~~~~~~~~~~~~WD~aAg~~Iv~eAGG~vtD~~~g~pl 317 (354)
T d1ka1a_ 241 -SSHDEQTAI-KNKLNISKSLHLDS-QAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPL 317 (354)
T ss_dssp -SCHHHHHHH-HHHTTCCEEEECSS-THHHHHHHHTSCSEEEECCSSTTCCCBGGGTHHHHHHHHHTTCEEECSSSCCBC
T ss_pred -cchhhhhhh-hhhhhcceeeeccc-HhhHHHHhcCcceEEEEeccccccCCChHHHHHHHHHHHhCCCEEEeCCCCccc
Confidence 222322223 22234445666675 789999999999999853 367899999999999999999995 78786
Q ss_pred CCCC------CcEE-Ee-ChHHHHHHHHHHhh
Q psy5224 1152 YLYT------GDIV-AG-NQKIFSQIISLINL 1175 (1178)
Q Consensus 1152 ~~~~------~~iv-a~-~~~l~~~l~~~l~~ 1175 (1178)
.+++ ++++ ++ ++++|+++++++++
T Consensus 318 ~~~~~~~l~~~g~i~a~~~~~lh~~il~~~~~ 349 (354)
T d1ka1a_ 318 DFGNGRTLATKGVIASSGPRELHDLVVSTSCD 349 (354)
T ss_dssp CTTSSSBCSSSCEEEESCCHHHHHHHHHHHHH
T ss_pred cCCCCCccCCCCEEEEcCcHHHHHHHHHHHHH
Confidence 6543 3445 43 46899999999887
|
| >d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: PIPase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-40 Score=372.33 Aligned_cols=245 Identities=15% Similarity=0.224 Sum_probs=183.0
Q ss_pred cccHHHHHHHHHHHHHHHHhccccccceEEEec-cCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcC-------
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLELENLRFEEK-KYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLT------- 990 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~~~~~~~~K-~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~------- 990 (1178)
-.+++.|+++|++||+.+++.+++. +..+.+| +++|+||+||+++|+.|++.|++.||++.|+|||+....
T Consensus 5 ~~~l~~a~~~a~~Ag~~~~~~~~~~-~~~~~~K~~~~D~VT~aD~~~e~~I~~~L~~~~P~~~ivgEE~~~~~~~~~~~~ 83 (304)
T d1jp4a_ 5 MRLVASAYSIAQKAGTIVRCVIAEG-DLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIGEEDLPPGEVDQELI 83 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEETTEEECHHHHHHHHHHHHHHHHHCTTSEEEESSCCC--CCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CccEEecCCCCCcccHHHHHHHHHHHHHHHHHCCCCEEEecccccccccchhhh
Confidence 3578999999999999999877553 3555555 567999999999999999999999999999999975321
Q ss_pred -------------------CCCCccEEEEeccCCchHHhccC-CCeEEEEEEEECCeEEEEEEEecCCCc----------
Q psy5224 991 -------------------NFENENIWIIDPLDNITNFSHNF-PQYCISIALKQKKQITHSVIYDPIRND---------- 1040 (1178)
Q Consensus 991 -------------------~~~~~~~wvIDPIDGT~nf~~g~-p~~~i~ial~~~g~pv~gvV~~P~~~~---------- 1040 (1178)
..+++++|+|||||||+||++|. |+||++||+.++|+|++|+||+|..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~WiIDPIDGT~nF~~g~~~~~~v~IaL~~~g~pv~gvi~~P~~~~~~~~~~~~g~ 163 (304)
T d1jp4a_ 84 EDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGR 163 (304)
T ss_dssp CCCCCHHHHTSCCCGGGTTCCGGGEEEEEEEEECHHHHHTTCGGGCEEEEEEEETTEEEEEEEEETTTTTTSCTTSCCCE
T ss_pred ccccchhhhccccccccccccCCCceEEEcCccCchhhhcCCCCceeeeeeeeecccccceeeecccccceeccccccce
Confidence 12457899999999999999995 899999999999999999999997654
Q ss_pred EEEEecCCceEEcCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEE
Q psy5224 1041 LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFF 1120 (1178)
Q Consensus 1041 ~~~a~~g~ga~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~ 1120 (1178)
.+++.+|.|++.+..+.+ +...........+ ..+........ ....++|+.||+++++|+||+|++|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~gs~~~~~~~vA~G~~d~~i 233 (304)
T d1jp4a_ 164 TIWGVLGLGAFGFQLKEA-----PAGKHIITTTRSH----SNKLVTDCIAA-MNPDNVLRVGGAGNKIIQLIEGKASAYV 233 (304)
T ss_dssp EEEEETTTEEESSCCCCC-----CTTCCEEEEESSS----CCHHHHHHHHT-TCCSEEEEESCHHHHHHHHHTTSCSEEE
T ss_pred eeccccccccceeeeccC-----ccccccccccccc----hhhHHHHHHhh-ccccccccccchHHhhhhhhhccccEEE
Confidence 555555555553322221 1122233333222 12222222221 2345788999999999999999999998
Q ss_pred ec--CCCccchHHHHHHHHHcCCcccccCCCCCCCC-------CCcEEEeChH---HHHHHHHHHh
Q psy5224 1121 EK--GLKPWNIAAGSLLIIESGGIISNFKGEKNYLY-------TGDIVAGNQK---IFSQIISLIN 1174 (1178)
Q Consensus 1121 ~~--~~~~wD~aA~~~i~~eaGg~v~d~~G~~~~~~-------~~~iva~~~~---l~~~l~~~l~ 1174 (1178)
+. +.++||+|||.+|++||||.++|.+|+|+.++ +++++|+++. +++++.+.++
T Consensus 234 ~~~~~~~~WD~aAg~~Iv~eAGG~vtdl~G~~~~~~~~~~~~~~~giiaa~~~~~~~~~~i~~~ik 299 (304)
T d1jp4a_ 234 FASPGCKKWDTCAPEVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNYEYYASRVPESVK 299 (304)
T ss_dssp ECSSCCBHHHHHHHHHHHHHTTCEEECTTSCCCCCSTTSCSBCTTCEEEESSCHHHHHHHSCHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHCCCEEECCCCCCccCCCCCccccCCcEEEECCCHHHHHHHHHHHHH
Confidence 65 46799999999999999999999999997654 3568876544 3344444444
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Probab=100.00 E-value=1.6e-39 Score=377.66 Aligned_cols=257 Identities=17% Similarity=0.158 Sum_probs=189.6
Q ss_pred cccHHHHHHHHHHHHHHHHhccccc--cceEEEec--------cCcccccHHHHHHHHHHHHHHHhcCCC--CeEEeecc
Q psy5224 919 GIYIVEAIKAARKSALIINRGSLEL--ENLRFEEK--------KYENFVFNINKASEKIITKILFNTYPS--YAFLIKKS 986 (1178)
Q Consensus 919 ~~~l~~a~~aa~~a~~~~~~~~~~~--~~~~~~~K--------~~~d~vT~aD~~~e~~i~~~L~~~~p~--~~iigEE~ 986 (1178)
+++++.++++++||+.++|..+++. -.+.+++| .+.|+||+||+++|++|++.|++.||+ +.|+|||+
T Consensus 2 ~~~l~~~l~~aekAa~iar~~~~~~~l~~~~v~ek~~~~~~~k~~~D~VT~AD~~aq~~I~~~L~~~fP~~~~~IvGEE~ 81 (400)
T d1inpa_ 2 SDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEES 81 (400)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchHHHhHhhhcccccccccCCCCCccHHHHHHHHHHHHHHHHHCcCCCCCEEccCC
Confidence 4689999999999999987643321 12223333 357899999999999999999999999 67999997
Q ss_pred CCcCC---------------------------------------------------------CCCccEEEEeccCCchHH
Q psy5224 987 NYLTN---------------------------------------------------------FENENIWIIDPLDNITNF 1009 (1178)
Q Consensus 987 ~~~~~---------------------------------------------------------~~~~~~wvIDPIDGT~nf 1009 (1178)
++..+ ..++++|+|||||||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~IDPIDGT~~F 161 (400)
T d1inpa_ 82 NELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQY 161 (400)
T ss_dssp SEEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHHH
T ss_pred CcccccccchhhhcccchhhhhhhhhhhhcccccchhhhhccccccchhccccccccccccCCCccceEEEecCcCchhh
Confidence 53111 113478999999999999
Q ss_pred hccCCCeE----------------EEEEEEECCeEEEEEEEecCCC----------cEEEEecCCceEEcCeecccCCCC
Q psy5224 1010 SHNFPQYC----------------ISIALKQKKQITHSVIYDPIRN----------DLFTAIKGCGAYLNEKRIRVNKRN 1063 (1178)
Q Consensus 1010 ~~g~p~~~----------------i~ial~~~g~pv~gvV~~P~~~----------~~~~a~~g~ga~~n~~~~~~~~~~ 1063 (1178)
++|.|.|| |++++.++|+|++|||++|..+ ++|+|.+|.|++.|+.+.+++.+.
T Consensus 162 i~G~~~~~v~iaL~~~~~~~v~vlI~lal~~~G~Pv~GvI~~P~~~~~~~~~~~~G~~~~a~~g~Ga~~~~~~~~~~~~~ 241 (400)
T d1inpa_ 162 IKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRS 241 (400)
T ss_dssp HHCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSSTT
T ss_pred ccCCccceeeeehhccccccceeeeeehheECCEEEEeEecccccccccccccCCceEEEEecCcCccccCccccccccc
Confidence 99999997 4455567999999999999864 599999999999998877765554
Q ss_pred CCCCcEEEeccCCCCCC----------ChHHHHHHHHHHhhcCCccccchHHHhHHHHHccccCEEEec--CCCccchHH
Q psy5224 1064 KINDALIGTDFSFKNNI----------NSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEK--GLKPWNIAA 1131 (1178)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~r~~Gs~~~~~~~va~G~~d~~~~~--~~~~wD~aA 1131 (1178)
...........+..... ..+...+.... ....++|+.|++++++|+||+|++|+|+.. +.++||+||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~-~~~~~~~~~g~a~~k~~~VA~G~~D~yl~~~~~~~~WD~aA 320 (400)
T d1inpa_ 242 NSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSH-VCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCA 320 (400)
T ss_dssp TSSCSSCCCCBTTBTTSSSSCCEEEECTTCCSCCCCTT-TTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCBHHHHHH
T ss_pred cccccceecccCcccccccceEEeeccchHHHHHHHHH-hCCceEEEehHHHHHHHHHhCCCCCEEEecCCCCCHHHHHH
Confidence 43333222221111100 00000000000 112345677889999999999999999864 367899999
Q ss_pred HHHHHHHcCCcccccCCCCCCC--------------------------CCCcEEE-eChHHHHHHHHHHhhh
Q psy5224 1132 GSLLIIESGGIISNFKGEKNYL--------------------------YTGDIVA-GNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1132 ~~~i~~eaGg~v~d~~G~~~~~--------------------------~~~~iva-~~~~l~~~l~~~l~~~ 1176 (1178)
|++|++||||.|||++|+|.++ |++++|| +|+++|+++++.|+++
T Consensus 321 g~~Il~eaGG~VtD~~G~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~N~~giIA~~~~~~h~~~l~~l~~~ 392 (400)
T d1inpa_ 321 AHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQH 392 (400)
T ss_dssp HHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTT
T ss_pred HHHHHHHCCCEEECCCCCccccccccccccccccccccccccccccccccCCEEEECCHHHHHHHHHHHHHh
Confidence 9999999999999999875332 4467897 6999999999999885
|
| >d1nuwa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Fructose-1,6-bisphosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.27 E-value=1e-10 Score=126.95 Aligned_cols=254 Identities=10% Similarity=0.152 Sum_probs=167.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhccc-cccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCcCC----C
Q psy5224 918 PGIYIVEAIKAARKSALIINRGSL-ELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTN----F 992 (1178)
Q Consensus 918 ~~~~l~~a~~aa~~a~~~~~~~~~-~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~~~----~ 992 (1178)
...++.....++++.+..+++..- ...........+||.+...|..+++++.+.|++...-..+.+||+++... .
T Consensus 23 l~~ll~~I~~A~k~Ia~~Ir~a~l~~~~G~ag~~N~~Gd~q~~LDv~an~~~~~~l~~~~~v~~~~SEE~e~~~~~~~~~ 102 (328)
T d1nuwa_ 23 MTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEK 102 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTCCSEEEEECTTSCEEEHHHHHHHHHHHHHHHHTTCEEEEEETTCSSCEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCcccCCccHHHHHHHHHHHHHHHHHhhCCceEEEeecccCcceeecCCC
Confidence 445666666777777777776432 21223334456899999999999999999999875556777888765321 2
Q ss_pred CCccEEEEeccCCchHHhccCCCeEEEEEEEECC--------------e--EEEE-EEEecCCCcEEEEecCCceEE---
Q psy5224 993 ENENIWIIDPLDNITNFSHNFPQYCISIALKQKK--------------Q--ITHS-VIYDPIRNDLFTAIKGCGAYL--- 1052 (1178)
Q Consensus 993 ~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~g--------------~--pv~g-vV~~P~~~~~~~a~~g~ga~~--- 1052 (1178)
..++.+..||+||++|.-.+.+ .++..+++++. + ...| ++|-|.+.-++.- |.|+..
T Consensus 103 ~g~y~V~fDPLDGSSnId~N~s-VGTIFsI~~~~~~~~~~~~~~lq~G~~qvAAGY~lYGpsT~lv~t~--g~gv~~Ftl 179 (328)
T d1nuwa_ 103 RGKYVVCFDPLDGSSNIDCLVS-IGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAM--VNGVNCFML 179 (328)
T ss_dssp EEEEEEEEEEEECGGGTTTTCC-EEEEEEEEECCCSSCCCGGGGCCCGGGCSEEEEEEESSSEEEEEEE--TTEEEEEEE
T ss_pred CceEEEEEecCCCccccccCcc-eeEEEEEEccCCcCCcchhhccCCChhheeeeeEEEecceEEEEEE--CCcEeEEEE
Confidence 3469999999999999999988 89999999632 1 3334 5677877665543 445432
Q ss_pred c---Ceec--ccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHh------hcCCccccchHHHhHHHHHccccCEEEe
Q psy5224 1053 N---EKRI--RVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT------KCKNLRNIGTSSLNLAYVASGKLDGFFE 1121 (1178)
Q Consensus 1053 n---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~r~~Gs~~~~~~~va~G~~d~~~~ 1121 (1178)
+ |+-+ +..-+-+.+....+.+......++ +..+++.+... +....|..||.+-|+.++.. +-.+|+.
T Consensus 180 D~~~geF~l~~~~i~ip~~~~~ysin~~n~~~w~-~~~~~yi~~~~~~~~~~~~y~~Ry~gsmVaD~hr~L~-~GGif~y 257 (328)
T d1nuwa_ 180 DPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFD-PAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLV-YGGIFMY 257 (328)
T ss_dssp ETTTTEEEEEECSCCCCSSCSEEECCGGGGGGCC-HHHHHHHHHHHSCTTCCCCCEECCCSCHHHHHHHHHH-HCCEEEE
T ss_pred cCCCceeeecccccccCCCcceeeccccchhhhC-HHHHHHHHHhhccccCCCccceeeecchhhhHHHHHH-hCCeEEc
Confidence 1 2211 112222333444554443333333 44455544332 22457999999999988776 2366665
Q ss_pred cC--------CC-ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHHHHHHHHhhh
Q psy5224 1122 KG--------LK-PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFSQIISLINLN 1176 (1178)
Q Consensus 1122 ~~--------~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~~l~~~l~~~ 1176 (1178)
+. ++ .++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+++.+..++|
T Consensus 258 P~~~~~p~GKLRllyEa~P~Afi~EqAGG~asdG~~~iLdi~p~~~hqrtpl~~GS~~eV~~~~~~~~~~ 327 (328)
T d1nuwa_ 258 PANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKH 327 (328)
T ss_dssp CCBTTBTTCSSBTTTTHHHHHHHHHHTTCEEECSSSBGGGCCCSSTTCBCCEEEECHHHHHHHHHHHHHC
T ss_pred cCCCCCCCcceeeehhhhHHHHHHHhcCCeecCCCccccccCCCccccCCCeEEeCHHHHHHHHHHHHhc
Confidence 33 11 4899999999999999999965442 22222 357889999999999888775
|
| >d1d9qa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Fructose-1,6-bisphosphatase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=99.20 E-value=1.8e-10 Score=126.43 Aligned_cols=253 Identities=12% Similarity=0.105 Sum_probs=156.6
Q ss_pred CCccccHHHHHHHHHHHHHHHHhcc-ccccceEEEeccCcccccHHHHHHHHHHHHHHHhcCCCCeEEeeccCCc----C
Q psy5224 916 GSPGIYIVEAIKAARKSALIINRGS-LELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYL----T 990 (1178)
Q Consensus 916 ~~~~~~l~~a~~aa~~a~~~~~~~~-~~~~~~~~~~K~~~d~vT~aD~~~e~~i~~~L~~~~p~~~iigEE~~~~----~ 990 (1178)
.....++.....++++-++.+++.. ............+||.+...|..+++++.+.|++...-..+.+||+++. .
T Consensus 19 ~dL~~ll~~Ia~A~k~Ia~~Ir~a~l~~~~G~~g~~N~~Gd~qk~LDvian~i~~~aL~~s~~v~~~~SEE~~~~~~~~~ 98 (340)
T d1d9qa_ 19 AELTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEE 98 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHTTTC---------CCSSHHHHHHHHHHHHHTTTTEEEEEECCSSSCCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccccccCcCCCcchHHHHHHHHHHHHHHHHhcCCceEEEEEecCCcccccCC
Confidence 3344556666666666666666532 1111222333457899999999999999999988644455667776542 1
Q ss_pred CCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC-------------------------------C--eEEEE-EEEec
Q psy5224 991 NFENENIWIIDPLDNITNFSHNFPQYCISIALKQK-------------------------------K--QITHS-VIYDP 1036 (1178)
Q Consensus 991 ~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~-------------------------------g--~pv~g-vV~~P 1036 (1178)
..+.++.+..||+||++|.-.+.+ .++..+++++ | ....| ++|-|
T Consensus 99 ~~~g~y~VafDPLDGSSnId~N~s-VGTIFgI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lqpG~~~vaAGY~lYG~ 177 (340)
T d1d9qa_ 99 SYSGNYIVVFDPLDGSSNLDAAVS-TGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSS 177 (340)
T ss_dssp ETTSSCEEEEESSSCSCTTTTSSC-EEEEEEEECCSSCCCC--------CBCCHHHHHHHHHHCCTTTSEEEEEEEEESS
T ss_pred CCCcceEEEEeccCCccccccCCc-eeeEEEEEecCccccccccccccccccccccchhhhhhcCCccceeEEEEEEECC
Confidence 234579999999999999999988 9999999963 1 12333 56778
Q ss_pred CCCcEEEEecCCceE---Ec---Ceec-ccCC-CCCCCCcEEEeccCCCCCCChHHHHHHHHHHhh------cCCccccc
Q psy5224 1037 IRNDLFTAIKGCGAY---LN---EKRI-RVNK-RNKINDALIGTDFSFKNNINSEEYAKIFQIITK------CKNLRNIG 1102 (1178)
Q Consensus 1037 ~~~~~~~a~~g~ga~---~n---~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~G 1102 (1178)
.+.-++.. |+|++ ++ |+-+ ..++ +-+.+....+.+......+ ++..+++.+...+ ....|..|
T Consensus 178 sT~lv~t~--g~gv~~FtlD~~~gef~lt~~~i~ip~~~~~ys~n~~n~~~w-~~~~~~yi~~~~~~~~~~~~y~~Ry~G 254 (340)
T d1d9qa_ 178 SVIFVLTI--GKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLW-DENLKKYIDDLKEPGPSGKPYSARYIG 254 (340)
T ss_dssp SEEEEEES--SSCCEEEEEETTTTEEEEEESSCCCCSCCSEEECCGGGGGGS-CHHHHHHHHHHTSCCSSSCCCEECBCS
T ss_pred ceEEEEEE--CCCEEEEEEcCCCCeEEEeccccccCCCcccccCCccchhhh-hHHHHHHHHHHhccCCcCcceeeeeec
Confidence 76655543 33443 22 2221 1111 1222233444443333333 3445555554432 34589999
Q ss_pred hHHHhHHHHHccccCEEEecC--------CC-ccchHHHHHHHHHcCCcccccCCCC-----CCCCC-CcEEEeChHHHH
Q psy5224 1103 TSSLNLAYVASGKLDGFFEKG--------LK-PWNIAAGSLLIIESGGIISNFKGEK-----NYLYT-GDIVAGNQKIFS 1167 (1178)
Q Consensus 1103 s~~~~~~~va~G~~d~~~~~~--------~~-~wD~aA~~~i~~eaGg~v~d~~G~~-----~~~~~-~~iva~~~~l~~ 1167 (1178)
|.+-|+.++.. +-.+|+.+. ++ .++.++-..|+|.|||..+|-..+- ...+. ..++.++++-.+
T Consensus 255 smVaD~hr~L~-~GGif~yP~~~~~~~gkLRllyEa~P~afivE~AGG~asdG~~~iLdi~p~~~hqr~p~~~GS~~eV~ 333 (340)
T d1d9qa_ 255 SLVGDFHRTLL-YGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVE 333 (340)
T ss_dssp CHHHHHHHHHH-HCCEEEECCBTTBTTCSSBTTTTHHHHHHHHHHTTCEEESSSSBGGGCCCSSTTCBCCEEEECHHHHH
T ss_pred ccchhHHHHHH-hCCeEEecCCCCCCCccEeeecchhHHHHHHHhcCCcccCCCcccccCCCCccccCCCeEEeCHHHHH
Confidence 99999988776 336676543 11 4899999999999999999866542 22222 357889998888
Q ss_pred HHHHHH
Q psy5224 1168 QIISLI 1173 (1178)
Q Consensus 1168 ~l~~~l 1173 (1178)
++.+.+
T Consensus 334 ~~~~~~ 339 (340)
T d1d9qa_ 334 KVEKYL 339 (340)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 887654
|
| >d1ni9a_ e.7.1.2 (A:) Glycerol metabolism protein GlpX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: GlpX-like bacterial fructose-1,6-bisphosphatase domain: Glycerol metabolism protein GlpX species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.0089 Score=62.34 Aligned_cols=175 Identities=11% Similarity=0.057 Sum_probs=93.6
Q ss_pred cHHHHHHHHHHHHHHHhcCC-CCeEEeeccCCc-----------CCCCCccEEEEeccCCchHHhccCCCeEEEEEEEEC
Q psy5224 958 FNINKASEKIITKILFNTYP-SYAFLIKKSNYL-----------TNFENENIWIIDPLDNITNFSHNFPQYCISIALKQK 1025 (1178)
Q Consensus 958 T~aD~~~e~~i~~~L~~~~p-~~~iigEE~~~~-----------~~~~~~~~wvIDPIDGT~nf~~g~p~~~i~ial~~~ 1025 (1178)
.++|.++-+.+++.|...-= +.-++||-+-++ ....++.-.-|||+|||+.-++|.|.--..+|..++
T Consensus 32 ~~aD~aAv~AMR~~ln~i~~~G~VVIGEGe~DeAPMLyiGE~vG~g~gp~vDIAVDPleGT~l~A~g~pnAisViA~a~~ 111 (328)
T d1ni9a_ 32 NTADGAAVNAMRIMLNQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDK 111 (328)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEEEESSCC---CCSSCTTCEESCSCSCEEEEEEEEEECC------CCSCEEEEEEEET
T ss_pred HHHHHHHHHHHHHHhccCCcceeEEeCCCCcccCccCcCCCeecCCccceeEEEcccccchhHHhhcCCCcEEEEEEcCC
Confidence 47899999999999987532 344566532111 111234567899999999999999999999999888
Q ss_pred CeEEEEEEEecCC--CcEEEEecCCceEE-------cCeecccCCCCCCCCcEEEeccCCCCCCChHHHHHHHHHHhhcC
Q psy5224 1026 KQITHSVIYDPIR--NDLFTAIKGCGAYL-------NEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCK 1096 (1178)
Q Consensus 1026 g~pv~gvV~~P~~--~~~~~a~~g~ga~~-------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1178)
|.- .+.|.. +.+..+-.-+|..- |=+.+.....+++++..+..- +++++++..++..+ -..
T Consensus 112 G~l----l~aPd~YM~KiavGp~~~g~idld~~~~eNl~~~A~algk~i~dltV~VL---dRpRH~~lI~eir~---~Ga 181 (328)
T d1ni9a_ 112 GCF----LNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVTIL---AKPRHDAVIAEMQQ---LGV 181 (328)
T ss_dssp TCB----CCCCSCEEEEEEECGGGTTCCCTTSCHHHHHHHHHHHTTCCGGGCEEEEE---CC--CHHHHHHHHH---TTC
T ss_pred CCc----cCChhhcEEEEEecCccCCccCccCCHHHHHHHHHHHhcCCHhHeeeeee---ehHHHHHHHHHHHh---cCC
Confidence 753 233421 11222212223221 111222234455555555443 23344444333322 233
Q ss_pred Cccc--cchHHHhHHHHH--ccccCEEEecCCCccchHHHHHHHHHcCCccc
Q psy5224 1097 NLRN--IGTSSLNLAYVA--SGKLDGFFEKGLKPWNIAAGSLLIIESGGIIS 1144 (1178)
Q Consensus 1097 ~~r~--~Gs~~~~~~~va--~G~~d~~~~~~~~~wD~aA~~~i~~eaGg~v~ 1144 (1178)
++|. -| +.......+ ....|.|+..+-.|--+.+ +.-++..||..-
T Consensus 182 ri~LI~DG-DVagai~~~~~~~~iDi~mGiGGaPEGVla-AaAlkclGG~~q 231 (328)
T d1ni9a_ 182 RVFAIPDG-DVAASILTCMPDSEVDVLYGIGGAPEGVVS-AAVIRALDGDMN 231 (328)
T ss_dssp EEEEESCC-HHHHHHHHHSTTCSCSEEEEEEEHHHHHHH-HHHHHHTTCEEE
T ss_pred ceEEccCC-CeEEEEEEccCCCceeEEEEecCcchhhhh-hhhhhhcCceEE
Confidence 4443 34 344444444 4667999988877777776 445688888653
|