Psyllid ID: psy5269


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MKAIECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRALDPTSSLKSKL
cccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccc
cccHEEEEcHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccHHHHcc
MKAIECVIKVIFIMLekkpferlpkyTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQIlkpagqslgwepkaneNHLNTLLRSLIISrlgvygdpdtLTLARAKFEAHvkgtailpadlrspVYRAAIAGGSEATYQQLLKVIHNyghggygvttapgtsrYAVQLVTRaldptsslkskl
MKAIECVIKVIFimlekkpferlpKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKgtailpadlrsPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVtraldptsslkskl
MKAIECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRALDPTSSLKSKL
***IECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTR************
**A*ECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRALDPTSSL*SKL
MKAIECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRAL**********
MKAIECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRALDP********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKAIECVIKVIFIMLEKKPFERLPKYTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQLVTRALDPTSSLKSKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query190 2.2.26 [Sep-21-2011]
Q11011 920 Puromycin-sensitive amino yes N/A 0.710 0.146 0.367 6e-19
P55786 919 Puromycin-sensitive amino yes N/A 0.710 0.146 0.360 2e-18
Q9USX1 882 Aminopeptidase 1 OS=Schiz yes N/A 0.605 0.130 0.283 1e-08
Q95334 942 Glutamyl aminopeptidase O no N/A 0.536 0.108 0.304 3e-06
Q32LQ0 956 Glutamyl aminopeptidase O no N/A 0.536 0.106 0.285 2e-05
Q07075 957 Glutamyl aminopeptidase O no N/A 0.536 0.106 0.285 3e-05
P16406 945 Glutamyl aminopeptidase O no N/A 0.426 0.085 0.333 0.0002
P50123 945 Glutamyl aminopeptidase O no N/A 0.663 0.133 0.268 0.0003
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 Back     alignment and function desciption
 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 12/147 (8%)

Query: 7   VIKVIFIMLEKKPFERLPKYTSW--LTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFG 64
           +I  + ++   + F   P YT W  L+  L   G+       +  LLS+T+++    +F 
Sbjct: 631 IISTVEVLKVMEAFVNEPNYTVWSDLSCNL---GI-------LSTLLSHTDFYEEIQEFV 680

Query: 65  VQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTAIL 124
             +  P G+ LGW+PK  E HL+ LLR L++ +LG  G   TL  AR +F+ HV+G  IL
Sbjct: 681 KDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKEHVEGKQIL 740

Query: 125 PADLRSPVYRAAIAGGSEATYQQLLKV 151
            ADLRSPVY   +  G  AT   +LK+
Sbjct: 741 SADLRSPVYLTVLKHGDGATLDIMLKL 767




Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 Back     alignment and function description
>sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 Back     alignment and function description
>sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1 Back     alignment and function description
>sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1 Back     alignment and function description
>sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3 Back     alignment and function description
>sp|P16406|AMPE_MOUSE Glutamyl aminopeptidase OS=Mus musculus GN=Enpep PE=1 SV=1 Back     alignment and function description
>sp|P50123|AMPE_RAT Glutamyl aminopeptidase OS=Rattus norvegicus GN=Enpep PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
195167729 1001 GL22605 [Drosophila persimilis] gi|19410 0.531 0.100 0.435 9e-21
198467113 1001 GA10064 [Drosophila pseudoobscura pseudo 0.531 0.100 0.435 9e-21
195014794 1007 GH16241 [Drosophila grimshawi] gi|193897 0.605 0.114 0.417 1e-20
170044717 865 puromycin-sensitive aminopeptidase [Cule 0.542 0.119 0.456 2e-20
66499419 867 PREDICTED: puromycin-sensitive aminopept 0.552 0.121 0.428 2e-20
195375410 1008 GJ12921 [Drosophila virilis] gi|19415365 0.605 0.114 0.401 2e-20
383852999 866 PREDICTED: puromycin-sensitive aminopept 0.652 0.143 0.367 2e-20
332027952 930 Puromycin-sensitive aminopeptidase [Acro 0.552 0.112 0.447 3e-20
194747295 1079 GF24769 [Drosophila ananassae] gi|190623 0.542 0.095 0.417 3e-20
405977525 1032 Puromycin-sensitive aminopeptidase [Cras 0.642 0.118 0.402 4e-20
>gi|195167729|ref|XP_002024685.1| GL22605 [Drosophila persimilis] gi|194108090|gb|EDW30133.1| GL22605 [Drosophila persimilis] Back     alignment and taxonomy information
 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 71/101 (70%)

Query: 49  LLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLT 108
           +L+S+T+    F++FG  + +P  Q LGWEP+  ENHL+TLLRSL+++RL  +   D + 
Sbjct: 754 VLISHTDLMEDFHRFGRNLYEPVAQRLGWEPREGENHLDTLLRSLVLTRLVSFRSNDVIE 813

Query: 109 LARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLL 149
           +AR +F +H+ GT  LPADLR+  Y+AA+  G+E  ++++L
Sbjct: 814 VARQRFRSHINGTQPLPADLRTTCYKAALQDGNEQIFEEML 854




Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198467113|ref|XP_001354254.2| GA10064 [Drosophila pseudoobscura pseudoobscura] gi|198149515|gb|EAL31307.2| GA10064 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195014794|ref|XP_001984082.1| GH16241 [Drosophila grimshawi] gi|193897564|gb|EDV96430.1| GH16241 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|170044717|ref|XP_001849983.1| puromycin-sensitive aminopeptidase [Culex quinquefasciatus] gi|167867758|gb|EDS31141.1| puromycin-sensitive aminopeptidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|66499419|ref|XP_394245.2| PREDICTED: puromycin-sensitive aminopeptidase isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|195375410|ref|XP_002046494.1| GJ12921 [Drosophila virilis] gi|194153652|gb|EDW68836.1| GJ12921 [Drosophila virilis] Back     alignment and taxonomy information
>gi|383852999|ref|XP_003702012.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332027952|gb|EGI68003.1| Puromycin-sensitive aminopeptidase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|194747295|ref|XP_001956088.1| GF24769 [Drosophila ananassae] gi|190623370|gb|EDV38894.1| GF24769 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|405977525|gb|EKC41968.1| Puromycin-sensitive aminopeptidase [Crassostrea gigas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
FB|FBgn0261243 1075 Psa "Puromycin sensitive amino 0.531 0.093 0.425 1.1e-19
MGI|MGI:1101358 920 Npepps "aminopeptidase puromyc 0.715 0.147 0.369 1e-18
UNIPROTKB|F1M9V7 920 Npepps "Protein Npepps" [Rattu 0.715 0.147 0.363 2.7e-18
UNIPROTKB|B7Z463 839 NPEPPS "cDNA FLJ53354, highly 0.715 0.162 0.363 3e-18
UNIPROTKB|F1P7M0 860 NPEPPS "Uncharacterized protei 0.715 0.158 0.363 3.1e-18
UNIPROTKB|E9PLK3 915 NPEPPS "Puromycin-sensitive am 0.715 0.148 0.363 3.5e-18
UNIPROTKB|P55786 919 NPEPPS "Puromycin-sensitive am 0.715 0.147 0.363 3.5e-18
UNIPROTKB|E1BP91 921 NPEPPS "Uncharacterized protei 0.715 0.147 0.363 3.5e-18
UNIPROTKB|F1RWJ6 923 LOC414413 "Uncharacterized pro 0.715 0.147 0.363 3.5e-18
UNIPROTKB|F1P456 837 NPEPPS "Uncharacterized protei 0.721 0.163 0.365 1.7e-17
FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 238 (88.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 43/101 (42%), Positives = 67/101 (66%)

Query:    49 LLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLT 108
             +L+S+T+    F++FG  + +P    LGWEP+  ENHL+TLLRSL+++RL  +   DT+ 
Sbjct:   827 ILISHTDLMEDFHRFGRNLYEPVAYRLGWEPRDGENHLDTLLRSLVLTRLVSFRSSDTIE 886

Query:   109 LARAKFEAHVKGTAILPADLRSPVYRAAIAGGSEATYQQLL 149
              A+ +F  HV GT +LPADLR+  Y+A +  G E  + ++L
Sbjct:   887 EAKIRFRRHVNGTELLPADLRTTCYKAVLQDGDEKIFNEML 927


GO:0004177 "aminopeptidase activity" evidence=IEA;NAS
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z463 NPEPPS "cDNA FLJ53354, highly similar to Puromycin-sensitive aminopeptidase (EC 3.4.11.-)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7M0 NPEPPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
pfam11838323 pfam11838, DUF3358, Domain of unknown function (DU 1e-13
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information
 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 60  FYQFGVQILKPAGQSLGWEPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVK 119
             +F  ++  P  + LGWE     +H   LLR+L++S  G   +   +  A  +F A + 
Sbjct: 101 LKKFVRKLAAPLLEKLGWEFGPGSDHQLQLLRALLLSLAGGDEE--VVAAALDRFRALLD 158

Query: 120 GT---AILPADLRSPVYRAAIAGGSEATYQQLLKVIHN 154
           G    A +  DLR  V+ A  A G    Y Q+L    N
Sbjct: 159 GDKSLAAIDPDLRWSVFAALAANGGAKEYDQILAEYKN 196


This domain is functionally uncharacterized. This domain is found in eukaryotes and bacteria. This domain is found to the C-terminus of an aminopeptidase domain. Length = 323

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 190
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 99.96
KOG1046|consensus 882 99.89
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 99.63
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
Probab=99.96  E-value=1.5e-29  Score=214.20  Aligned_cols=164  Identities=26%  Similarity=0.434  Sum_probs=138.0

Q ss_pred             cccccccHHHHHHhhcCc-CCCCCchHh--hhhhhhccccccccccccccccc-C-chhHHHHHHHHHHHhhhhhhhcCC
Q psy5269           3 AIECVIKVIFIMLEKKPF-ERLPKYTSW--LTSGLAERGLRQFRRIPVDLLLS-N-TEYHHLFYQFGVQILKPAGQSLGW   77 (190)
Q Consensus         3 a~~G~i~~~~~l~l~~yL-~~E~~~~~W--~~~~L~~l~~~~~~~~~~~~~l~-~-~~~~~~~~~f~~~l~~~~~~~lg~   77 (190)
                      +.+|.++++.+|+++.|+ ++|++|.||  +.+.+..+          ...+. . +.....|++|+++++.|+++++||
T Consensus        49 ~~~g~~~~~~~l~l~~~~~~~E~~~~vw~~~~~~l~~l----------~~~l~~~~~~~~~~~~~~~~~l~~~~~~~l~~  118 (324)
T PF11838_consen   49 ARAGRLSYSDFLDLLEYLLPNETDYVVWSTALSNLSSL----------RNRLYAEDEELQEAFRKFVRRLLEPLYERLGW  118 (324)
T ss_dssp             HHTTSS-HHHHHHHHGGG-GT--SHHHHHHHHHHHHHH----------HHHHCSC-HHHHHHHHHHHHHHHHHHHHH--S
T ss_pred             HHcCCCCHHHHHHHHHHhccCCCchHHHHHHHHHHHHH----------HHHHHhccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            457999999999999999 999999999  99999999          54444 3 344455999999999999999999


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhcC-CC---CCCCCchHHHHHHHhhcCCHHHHHHHHHHHH
Q psy5269          78 EPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKG-TA---ILPADLRSPVYRAAIAGGSEATYQQLLKVIH  153 (190)
Q Consensus        78 ~~~~~e~~~~~~lR~~il~~ac~~g~~~c~~~a~~~f~~~~~~-~~---~ip~d~r~~vy~~~~~~g~~~~~~~l~~~~~  153 (190)
                      +..+++++....+|..++.++|  |+++|+++|.++|++|+.+ .+   +||||+|.+|||.++++|++++|+++++.|+
T Consensus       119 ~~~~~~~~~~~~lr~~~~~~a~--~~~~~~~~a~~~~~~~~~~~~~~~~~i~~dlr~~v~~~~~~~g~~~~~~~l~~~~~  196 (324)
T PF11838_consen  119 DPRPGEDHNDRLLRALLLSLAC--GDPECVAEARELFKAWLDGNDSPESSIPPDLRWAVYCAGVRNGDEEEWDFLWELYK  196 (324)
T ss_dssp             SSS--SCHHHHHHHHHHHHHHH--T-HHHHHHHHHHHHHHHHTTT-TTSTS-HHHHHHHHHHHTTS--HHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHhcCCcccccccchHHHHHHHHHHHHHhhHhhHHHHHHHHh
Confidence            9988899999999999999999  9999999999999999987 33   7999999999999999999999999999999


Q ss_pred             hcCC--------ceeeccCCHHHHHHHHHHHHH
Q psy5269         154 NYGH--------GGYGVTTAPGTSRYAVQLVTR  178 (190)
Q Consensus       154 ~s~~--------~aLg~t~d~~~l~~~L~~~l~  178 (190)
                      ++++        .||||++||++++++|+++++
T Consensus       197 ~~~~~~~k~~~l~aLa~~~d~~~~~~~l~~~l~  229 (324)
T PF11838_consen  197 NSTSPEEKRRLLSALACSPDPELLKRLLDLLLS  229 (324)
T ss_dssp             TTSTHHHHHHHHHHHTT-S-HHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHhhhccCCHHHHHHHHHHHcC
Confidence            9887        999999999999999999877



The rest of the members of this family are identified as aminopeptidase N of the actinomycete-type. The spectrum of activity may differ somewhat from the aminopeptidase N clade of Escherichia coli and most other proteobacteria, which are well separated phylogenetically within the M1 family. ; PDB: 3MDJ_A 2YD0_A 3QNF_C 3RJO_A 1Z5H_A 3Q7J_A 1Z1W_A 3SE6_B.

>KOG1046|consensus Back     alignment and domain information
>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
3se6_A 967 Endoplasmic reticulum aminopeptidase 2; thermolysi 6e-20
2xdt_A 897 Endoplasmic reticulum aminopeptidase 1; glycoprote 8e-19
3rjo_A 419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 3e-18
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 3e-12
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 4e-10
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 7e-09
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
 Score = 85.6 bits (212), Expect = 6e-20
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 11/131 (8%)

Query: 26  YTSWLTSGLAERGLRQFRRIPVDLLLSNTEYHHLFYQFGVQILKPAGQSLGWEPKANENH 85
             + L        L  F  +      + ++      ++ +Q  KP      W  K   + 
Sbjct: 693 SPALLE---GLSYLESFYHMMDRR--NISDISENLKRYLLQYFKPVIDRQSWSDK--GSV 745

Query: 86  LNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVK--GTAILPADLRSPVYRAAIAGGSEA 143
            + +LRS ++           +  A   F   ++  G   +P D+   VY       +  
Sbjct: 746 WDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVYSVGAQTTAG- 804

Query: 144 TYQQLLKVIHN 154
            +  LL+    
Sbjct: 805 -WNYLLEQYEL 814


>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Length = 351 Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Length = 363 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
3rjo_A 419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 100.0
2xdt_A 897 Endoplasmic reticulum aminopeptidase 1; glycoprote 99.97
3se6_A 967 Endoplasmic reticulum aminopeptidase 2; thermolysi 99.97
4fke_A 909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 99.96
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 99.91
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 98.82
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.1e-33  Score=247.59  Aligned_cols=162  Identities=12%  Similarity=0.066  Sum_probs=151.4

Q ss_pred             cccccccHHHHHHhhcCcCCCCCchHh--hhhhhhcccccccccccccccccC---chhHHHHHHHHHHHhhhhhhhcCC
Q psy5269           3 AIECVIKVIFIMLEKKPFERLPKYTSW--LTSGLAERGLRQFRRIPVDLLLSN---TEYHHLFYQFGVQILKPAGQSLGW   77 (190)
Q Consensus         3 a~~G~i~~~~~l~l~~yL~~E~~~~~W--~~~~L~~l~~~~~~~~~~~~~l~~---~~~~~~~~~f~~~l~~~~~~~lg~   77 (190)
                      |.+|.++|+.+|++++||++|++|+||  +.+.|+++          ..++..   ++.++.|++|+++++.|+++++||
T Consensus       119 a~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~~~l~~l----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw  188 (419)
T 3rjo_A          119 VSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPM----------YKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTW  188 (419)
T ss_dssp             HHHTSSCHHHHHHHHGGGGGCCSHHHHHHHHHHHHHH----------HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             HHcCCCCHHHHHHHHHHhcccchHHHHHHHHHHHHHH----------HHHHhccCchhHHHHHHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999  99999999          677753   567899999999999999999999


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhcCCC--CCCCCchHHHHHHHhhcCCHHHHHHHHHHHHhc
Q psy5269          78 EPKANENHLNTLLRSLIISRLGVYGDPDTLTLARAKFEAHVKGTA--ILPADLRSPVYRAAIAGGSEATYQQLLKVIHNY  155 (190)
Q Consensus        78 ~~~~~e~~~~~~lR~~il~~ac~~g~~~c~~~a~~~f~~~~~~~~--~ip~d~r~~vy~~~~~~g~~~~~~~l~~~~~~s  155 (190)
                      ++  ++++.+.++|..++++||.+|+++|++.|+++|++|+.++.  +||||+|.+|||+++++  +++|++++++|+++
T Consensus       189 ~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~Vy~~~~~~--~~~~~~l~~~y~~s  264 (419)
T 3rjo_A          189 TD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVFAVGAQS--TEGWDFLYSKYQFS  264 (419)
T ss_dssp             SC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSCCCGGGHHHHHHHHTTS--HHHHHHHHHHHHHC
T ss_pred             CC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCCCCCcceeEEeeeeCC--HHHHHHHHHHHhcC
Confidence            85  68999999999999999999999999999999999998754  59999999999999987  89999999999999


Q ss_pred             CC--------ceeeccCCHHHHHHHHHHHHH
Q psy5269         156 GH--------GGYGVTTAPGTSRYAVQLVTR  178 (190)
Q Consensus       156 ~~--------~aLg~t~d~~~l~~~L~~~l~  178 (190)
                      ++        .||||++||++++++|+++++
T Consensus       265 ~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~  295 (419)
T 3rjo_A          265 LSSTEKSQIEFALCRTQNKEKLQWLLDESFK  295 (419)
T ss_dssp             CCHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCCCHHHHHHHHHHHhC
Confidence            87        999999999999999999875



>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 190
d1kifa1246 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N 6e-09
d1c0pa1268 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida 2e-07
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 246 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]
 Score = 51.8 bits (123), Expect = 6e-09
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 116 AHVKGTAILPADLRSPVYRAAIAGGSEATYQQLLKVIHNYGHGGYGVTTAPGTSRYAVQL 175
             V    + P  L+  + R  +  GS        +VIHNYGHGGYG+T   G +    +L
Sbjct: 182 TGVWAGVLQPDPLQVRLEREQLRFGSSN-----TEVIHNYGHGGYGLTIHWGCALEVAKL 236

Query: 176 VTRALD 181
             + L+
Sbjct: 237 FGKVLE 242


>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00