Psyllid ID: psy5372
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 586 | 2.2.26 [Sep-21-2011] | |||||||
| P28840 | 752 | Neuroendocrine convertase | yes | N/A | 0.930 | 0.724 | 0.438 | 1e-142 | |
| P29120 | 753 | Neuroendocrine convertase | yes | N/A | 0.921 | 0.717 | 0.435 | 1e-141 | |
| Q9GLR1 | 753 | Neuroendocrine convertase | yes | N/A | 0.931 | 0.725 | 0.430 | 1e-140 | |
| P63240 | 753 | Neuroendocrine convertase | N/A | N/A | 0.931 | 0.725 | 0.430 | 1e-140 | |
| P63239 | 753 | Neuroendocrine convertase | yes | N/A | 0.931 | 0.725 | 0.430 | 1e-140 | |
| P26016 | 1269 | Furin-like protease 1, is | yes | N/A | 0.912 | 0.421 | 0.405 | 1e-116 | |
| P30430 | 1101 | Furin-like protease 1, is | no | N/A | 0.912 | 0.485 | 0.405 | 1e-116 | |
| P23377 | 793 | Furin OS=Rattus norvegicu | no | N/A | 0.880 | 0.650 | 0.398 | 1e-113 | |
| P23188 | 793 | Furin OS=Mus musculus GN= | no | N/A | 0.885 | 0.654 | 0.398 | 1e-113 | |
| Q63415 | 937 | Proprotein convertase sub | no | N/A | 0.906 | 0.566 | 0.402 | 1e-112 |
| >sp|P28840|NEC1_RAT Neuroendocrine convertase 1 OS=Rattus norvegicus GN=Pcsk1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/570 (43%), Positives = 354/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIHGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAL 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K RKR+ ++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERRKRSVPRDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ S KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTASLPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W NVP + +C I +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRNVPEKKECIIKDNNFEPRALKANG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + + LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIVEIPTRACEGQENAINSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+PVG W ++ D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPVGTWTLKVTD 573
|
Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin and insulin. Rattus norvegicus (taxid: 10116) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 9EC: 3 |
| >sp|P29120|NEC1_HUMAN Neuroendocrine convertase 1 OS=Homo sapiens GN=PCSK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/565 (43%), Positives = 352/565 (62%), Gaps = 25/565 (4%)
Query: 10 HFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG 69
F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++ T
Sbjct: 30 QFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAFHITKR 89
Query: 70 LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQW 129
L +D RVIW +QQ+ K KR+ +++ L F D W QW
Sbjct: 90 LSDDDRVIWAEQQYEKERSKRSALRDSALNL-------------------FNDPMWNQQW 130
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNF 189
Y QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE SY+F
Sbjct: 131 YLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDF 189
Query: 190 NAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL 247
N D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD
Sbjct: 190 NDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDA 248
Query: 248 IESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307
IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+G
Sbjct: 249 IEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASG 308
Query: 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT 367
NG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I +
Sbjct: 309 NGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSA 368
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++ GW++
Sbjct: 369 DLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKK 428
Query: 428 NARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 429 NGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIE 488
Query: 486 FNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGF 545
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF
Sbjct: 489 IPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGF 548
Query: 546 VDWSILTLKHWGEDPVGEWKFEIFD 570
+W +++ WGE+P+G W I D
Sbjct: 549 KNWDFMSVHTWGENPIGTWTLRITD 573
|
Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin and insulin. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 9 EC: 3 |
| >sp|Q9GLR1|NEC1_BOVIN Neuroendocrine convertase 1 OS=Bos taurus GN=PCSK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/569 (43%), Positives = 351/569 (61%), Gaps = 23/569 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ + F+N+W I G P+ A+ +AQ+LG+ G I L+NHYLF + H ++
Sbjct: 25 VKAKKQFVNEWAAEIPGGPEAASAIAQELGYDLLGQIGSLENHYLFKHRNHPRRSRRSAL 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K KR+ +++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERSKRSVLRDSALDL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTATLPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE 243
SY+FN D PRY+ NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRYDLINENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGI 244
Query: 244 TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFV 303
TD IE+ + F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV
Sbjct: 245 VTDAIEASLIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFV 304
Query: 304 FAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVK 363
+A+GNG GDNC DGY +SIYTI+I SA + G SP+Y+E+C+ +AT+YS G +
Sbjct: 305 WASGNGGRQGDNCDCDGYTDSIYTISINSASQQGLSPWYAEKCSSTLATSYSSGDYTDQR 364
Query: 364 IITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVS 423
I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 365 ITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNP 424
Query: 424 GWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASS 481
GW++N L +S +GFGL+N LV LA W +VP + +C + +
Sbjct: 425 GWKKNGAGLMVNSRFGFGLLNAKALVDLADPSTWSSVPEKKECVVKDNDFEPRALKANGE 484
Query: 482 WQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDC 541
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 485 VIIEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTS 544
Query: 542 KTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+P+G W I D
Sbjct: 545 PNGFKNWDFMSVHTWGENPIGTWTLRIAD 573
|
Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin and insulin. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 9 EC: 3 |
| >sp|P63240|NEC1_MUSCO Neuroendocrine convertase 1 OS=Mus cookii GN=Pcsk1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/569 (43%), Positives = 351/569 (61%), Gaps = 23/569 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSAL 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RV W +QQ+ K KR+ +K++ + +F D
Sbjct: 85 HITKRLSDDDRVTWAEQQYEKERSKRS---------------VQKDSALD----LFNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+ E I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTAALPKLDLHVIPVW-EKGITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE 243
SY+FN D PRY+ NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRYDLTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGI 244
Query: 244 TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFV 303
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV
Sbjct: 245 VTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFV 304
Query: 304 FAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVK 363
+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +
Sbjct: 305 WASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQR 364
Query: 364 IITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVS 423
I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL+
Sbjct: 365 ITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLASNP 424
Query: 424 GWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASS 481
GW++N L +S +GFGL+N LV LA + W NVP + +C + +
Sbjct: 425 GWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRNVPEKKECVVKDNNFEPRALKANGE 484
Query: 482 WQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDC 541
C + +K LEHV IE+ RRGD+ + LT+ G +VL+ R +D
Sbjct: 485 VIVEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAVGTSTVLLAERERDTS 544
Query: 542 KTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+PVG W +I D
Sbjct: 545 PNGFKNWDFMSVHTWGENPVGTWTLKITD 573
|
Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin and insulin. Mus cookii (taxid: 10098) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 9 EC: 3 |
| >sp|P63239|NEC1_MOUSE Neuroendocrine convertase 1 OS=Mus musculus GN=Pcsk1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/569 (43%), Positives = 351/569 (61%), Gaps = 23/569 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSAL 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RV W +QQ+ K KR+ +K++ + +F D
Sbjct: 85 HITKRLSDDDRVTWAEQQYEKERSKRS---------------VQKDSALD----LFNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+ E I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTAALPKLDLHVIPVW-EKGITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE 243
SY+FN D PRY+ NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRYDLTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGI 244
Query: 244 TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFV 303
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV
Sbjct: 245 VTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFV 304
Query: 304 FAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVK 363
+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +
Sbjct: 305 WASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQR 364
Query: 364 IITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVS 423
I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL+
Sbjct: 365 ITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLASNP 424
Query: 424 GWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASS 481
GW++N L +S +GFGL+N LV LA + W NVP + +C + +
Sbjct: 425 GWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRNVPEKKECVVKDNNFEPRALKANGE 484
Query: 482 WQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDC 541
C + +K LEHV IE+ RRGD+ + LT+ G +VL+ R +D
Sbjct: 485 VIVEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAVGTSTVLLAERERDTS 544
Query: 542 KTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+PVG W +I D
Sbjct: 545 PNGFKNWDFMSVHTWGENPVGTWTLKITD 573
|
Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin and insulin. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 9 EC: 3 |
| >sp|P26016|FUR11_DROME Furin-like protease 1, isoforms 1/1-X/2 OS=Drosophila melanogaster GN=Fur1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/567 (40%), Positives = 337/567 (59%), Gaps = 32/567 (5%)
Query: 10 HFLNQWVVHI-SGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETV 68
H+ + W VHI +GD +A+ VA+D GF G I D+HY F+ + + ++ T
Sbjct: 230 HYTHTWAVHIPNGDNGMADAVAKDHGFVNLGKI--FDDHYHFAHHKVSKRSLSPATHHQT 287
Query: 69 GLLNDARVIWTQQQFAKHLRKR--AEIQELRRQLRAMSQIYRKETEVSKYEGM-FTDEWW 125
L +D RV W +QQ AK KR ++ R RAMS + + M F D W
Sbjct: 288 RLDDDDRVHWAKQQRAKSRSKRDFIRMRPSRTSSRAMSMV----------DAMSFNDSKW 337
Query: 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPEL 185
P WY N LD+N++P ++ + I G GV + I+DDG+E H DI+D++ P+
Sbjct: 338 PQMWYL------NRGGGLDMNVIPAWK-MGITGKGVVVTILDDGLESDHPDIQDNYDPKA 390
Query: 186 SYNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGET 244
SY+ N+ D P Y+ N+HGTRCAGE+ NNS C VG+ YGA VGGV++LDG+
Sbjct: 391 SYDVNSHDDDPMPHYDMTDSNRHGTRCAGEVAATANNSFCAVGIAYGASVGGVRMLDGDV 450
Query: 245 TDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304
TD +E+++L +DIYS SWGP DDGK++DGPG+L+ A G +GR GKG +F++
Sbjct: 451 TDAVEARSLSLNPQHIDIYSASWGPDDDGKTVDGPGELASRAFIEGTTKGRGGKGSIFIW 510
Query: 305 AAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKI 364
A+GNG DNC DGY NSI+T++I+SA E+G P+YSE+C+ +AT YS G ++
Sbjct: 511 ASGNGGREQDNCNCDGYTNSIWTLSISSATEEGHVPWYSEKCSSTLATTYSSGGQGEKQV 570
Query: 365 ITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSG 424
+TTD+H++CT H+GTSA+AP+AAG+ AL L++N N+TWRD QHI+ T++ L S
Sbjct: 571 VTTDLHHSCTVSHTGTSASAPLAAGIAALVLQSNQNLTWRDLQHIVVRTAKPANLKDPS- 629
Query: 425 WERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEI-ALDVGSSTGFSYASSWQ 483
W RN ++G+GL++ ++V +A+NW VP Q +CEI A V + Q
Sbjct: 630 WSRNGVGRRVSHSFGYGLMDAAEMVRVARNWKAVPEQQRCEINAPHVDKVIPPRTHITLQ 689
Query: 484 RSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKT 543
+ N V YLEHV A + + RRGD+++ L +P+ L+ PR D+ ++
Sbjct: 690 LTVN------HCRSVNYLEHVQAKITLTSQRRGDIQLFLRSPANTSVTLLTPRIHDNSRS 743
Query: 544 GFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF W +++ WGE P G W+ EI +
Sbjct: 744 GFNQWPFMSVHTWGESPQGNWQLEIHN 770
|
Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 7 EC: 5 |
| >sp|P30430|FUR1C_DROME Furin-like protease 1, isoform 1-CRR OS=Drosophila melanogaster GN=Fur1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/567 (40%), Positives = 337/567 (59%), Gaps = 32/567 (5%)
Query: 10 HFLNQWVVHI-SGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETV 68
H+ + W VHI +GD +A+ VA+D GF G I D+HY F+ + + ++ T
Sbjct: 230 HYTHTWAVHIPNGDNGMADAVAKDHGFVNLGKI--FDDHYHFAHHKVSKRSLSPATHHQT 287
Query: 69 GLLNDARVIWTQQQFAKHLRKR--AEIQELRRQLRAMSQIYRKETEVSKYEGM-FTDEWW 125
L +D RV W +QQ AK KR ++ R RAMS + + M F D W
Sbjct: 288 RLDDDDRVHWAKQQRAKSRSKRDFIRMRPSRTSSRAMSMV----------DAMSFNDSKW 337
Query: 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPEL 185
P WY N LD+N++P ++ + I G GV + I+DDG+E H DI+D++ P+
Sbjct: 338 PQMWYL------NRGGGLDMNVIPAWK-MGITGKGVVVTILDDGLESDHPDIQDNYDPKA 390
Query: 186 SYNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGET 244
SY+ N+ D P Y+ N+HGTRCAGE+ NNS C VG+ YGA VGGV++LDG+
Sbjct: 391 SYDVNSHDDDPMPHYDMTDSNRHGTRCAGEVAATANNSFCAVGIAYGASVGGVRMLDGDV 450
Query: 245 TDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304
TD +E+++L +DIYS SWGP DDGK++DGPG+L+ A G +GR GKG +F++
Sbjct: 451 TDAVEARSLSLNPQHIDIYSASWGPDDDGKTVDGPGELASRAFIEGTTKGRGGKGSIFIW 510
Query: 305 AAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKI 364
A+GNG DNC DGY NSI+T++I+SA E+G P+YSE+C+ +AT YS G ++
Sbjct: 511 ASGNGGREQDNCNCDGYTNSIWTLSISSATEEGHVPWYSEKCSSTLATTYSSGGQGEKQV 570
Query: 365 ITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSG 424
+TTD+H++CT H+GTSA+AP+AAG+ AL L++N N+TWRD QHI+ T++ L S
Sbjct: 571 VTTDLHHSCTVSHTGTSASAPLAAGIAALVLQSNQNLTWRDLQHIVVRTAKPANLKDPS- 629
Query: 425 WERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEI-ALDVGSSTGFSYASSWQ 483
W RN ++G+GL++ ++V +A+NW VP Q +CEI A V + Q
Sbjct: 630 WSRNGVGRRVSHSFGYGLMDAAEMVRVARNWKAVPEQQRCEINAPHVDKVIPPRTHITLQ 689
Query: 484 RSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKT 543
+ N V YLEHV A + + RRGD+++ L +P+ L+ PR D+ ++
Sbjct: 690 LTVN------HCRSVNYLEHVQAKITLTSQRRGDIQLFLRSPANTSVTLLTPRIHDNSRS 743
Query: 544 GFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF W +++ WGE P G W+ EI +
Sbjct: 744 GFNQWPFMSVHTWGESPQGNWQLEIHN 770
|
Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 7 EC: 5 |
| >sp|P23377|FURIN_RAT Furin OS=Rattus norvegicus GN=Furin PE=1 SV=1 | Back alignment and function description |
|---|
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 321/570 (56%), Gaps = 54/570 (9%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHY---LFSKKQHNHKTPEETTFET 67
F N W VHISG P +A+ VA+ GFH G I G H+ +K+ + P + +
Sbjct: 30 FTNTWAVHISGGPAVADSVARKHGFHNLGQIFGDYYHFWHRAVTKRSLSPHRPRHSRLQR 89
Query: 68 VGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPM 127
V +V W +QQ AK KR QE TD +P
Sbjct: 90 V-----PQVKWLEQQVAKQRAKRDVYQEP------------------------TDPKFPQ 120
Query: 128 QWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSY 187
QWY LS +++ DLN+ + + G G+ + I+DDG+E H D+ ++ P S+
Sbjct: 121 QWY-----LSGVTQR-DLNVKEAWAQ-GFTGRGIVVSILDDGIEKNHPDLAGNYDPGASF 173
Query: 188 NFNAEKWDITPRYEDPR-NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTD 246
+ N + D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV++LDGE TD
Sbjct: 174 DVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTD 233
Query: 247 LIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAA 306
+E+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G G +FV+A+
Sbjct: 234 AVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWAS 293
Query: 307 GNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIIT 366
GNG D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G + +I+T
Sbjct: 294 GNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVT 353
Query: 367 TDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWE 426
TD+ CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+ L + + W
Sbjct: 354 TDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NANDWA 412
Query: 427 RNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIAL-----DVGSSTGFSYASS 481
N +YG+GL++ +V+LA+NW V Q KC I + D+G
Sbjct: 413 TNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIEILAEPKDIGKRL------- 465
Query: 482 WQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDC 541
+ +T C + + LEHV A L + + RRGD+ I L +P G +S L+ RP D
Sbjct: 466 -EVRKTVTACLGEPNHISRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYS 524
Query: 542 KTGFVDWSILTLKHWGEDPVGEWKFEIFDT 571
GF DW+ +T W EDP GEW EI +T
Sbjct: 525 ADGFNDWAFMTTHSWDEDPSGEWVLEIENT 554
|
Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 7 EC: 5 |
| >sp|P23188|FURIN_MOUSE Furin OS=Mus musculus GN=Furin PE=1 SV=2 | Back alignment and function description |
|---|
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/567 (39%), Positives = 319/567 (56%), Gaps = 48/567 (8%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGL 70
F N W VHI G P +A++VAQ GFH G I G ++Y F + ++ L
Sbjct: 30 FTNTWAVHIPGGPAVADRVAQKHGFHNLGQIFG--DYYHFWHRAVTKRSLSPHRPRHSRL 87
Query: 71 LNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWY 130
+ +V W +QQ AK KR QE TD +P QWY
Sbjct: 88 QREPQVKWLEQQVAKRRAKRDVYQEP------------------------TDPKFPQQWY 123
Query: 131 EQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFN 190
LS +++ DLN+ + + G G+ + I+DDG+E H D+ ++ P S++ N
Sbjct: 124 -----LSGVTQR-DLNVKEAWAQ-GFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVN 176
Query: 191 AEKWDITPRYEDPR-NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIE 249
+ D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV++LDGE TD +E
Sbjct: 177 DQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVE 236
Query: 250 SKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG 309
+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G G +FV+A+GNG
Sbjct: 237 ARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNG 296
Query: 310 KYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDV 369
D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G + +I+TTD+
Sbjct: 297 GREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDL 356
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNA 429
CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+ L+ W N
Sbjct: 357 RQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLN-ADDWATNG 415
Query: 430 RDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIAL-----DVGSSTGFSYASSWQR 484
+YG+GL++ +V+LA+NW V Q KC + + D+G A
Sbjct: 416 VGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKRLEVRKA----- 470
Query: 485 SFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTG 544
+T C + + LEHV A L + + RRGD+ I L +P G +S L+ RP D G
Sbjct: 471 ---VTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADG 527
Query: 545 FVDWSILTLKHWGEDPVGEWKFEIFDT 571
F DW+ +T W EDP GEW EI +T
Sbjct: 528 FNDWAFMTTHSWDEDPAGEWVLEIENT 554
|
Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 7 EC: 5 |
| >sp|Q63415|PCSK6_RAT Proprotein convertase subtilisin/kexin type 6 OS=Rattus norvegicus GN=Pcsk6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 323/566 (57%), Gaps = 35/566 (6%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG- 69
+ N W V + G P A++VA G+ G I LD++Y F ++ KT + +T + G
Sbjct: 53 YTNHWAVQVLGGPGAADRVAAAHGYLNLGQIGNLDDYYHF----YHSKTFKRSTLSSRGP 108
Query: 70 ---LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWP 126
L D +V W QQQ K + ++RQ R+ S +Y F D W
Sbjct: 109 HTFLRMDPQVKWLQQQEVK--------RRVKRQARSDS-LY------------FNDPIWS 147
Query: 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELS 186
WY NS + ++N+ ++ G V + I+DDG+E H D+ ++ S
Sbjct: 148 NMWYMHCAD-KNSRCRSEMNVQAAWKR-GYTGKNVVVTILDDGIERNHPDLAPNYDSYAS 205
Query: 187 YNFNAEKWDITPRYE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETT 245
Y+ N +D +PRY+ NKHGTRCAGE+ NNS C VG+ Y A++GG+++LDG+ T
Sbjct: 206 YDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVT 265
Query: 246 DLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFA 305
D++E+K+L + +DIYS SWGP DDGK++DGPG+L+K A + GI++GRQG G +FV+A
Sbjct: 266 DVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAKQAFEYGIKKGRQGLGSIFVWA 325
Query: 306 AGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKII 365
+GNG GD+C+ DGY NSIYTI+++S E+G P+Y EEC +AT YS G KI+
Sbjct: 326 SGNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGAFYERKIV 385
Query: 366 TTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGW 425
TTD+ CT H+GTS +AP+ AG++ALALEAN +TWRD QH+L TS L S W
Sbjct: 386 TTDLRQRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLK-ASDW 444
Query: 426 ERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
+ N YGFGL++ LV A+ W VP+Q C +A + +
Sbjct: 445 KVNGAGHKVSHLYGFGLVDAEALVLEARKWTAVPSQHMC-VATADKRPRSIPVVQVLRTT 503
Query: 486 FNITPCSDTVDE-VKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTG 544
C+D D+ V YLEHV ++I HPRRGD++I L +PSG KS L+ R D G
Sbjct: 504 ALTNACADHSDQRVVYLEHVVVRISISHPRRGDLQIHLISPSGTKSQLLAKRLLDFSNEG 563
Query: 545 FVDWSILTLKHWGEDPVGEWKFEIFD 570
F +W +T+ WGE GEW E+ D
Sbjct: 564 FTNWEFMTVHCWGEKAEGEWTLEVQD 589
|
Likely to represent an endoprotease activity within the constitutive secretory pathway, with unique restricted distribution in both neuroendocrine and non-neuroendocrine tissues and capable of cleavage at the RX(K/R)R consensus motif. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 586 | ||||||
| 242011084 | 678 | Furin-1 precursor, putative [Pediculus h | 0.950 | 0.821 | 0.451 | 1e-143 | |
| 149726484 | 754 | PREDICTED: neuroendocrine convertase 1 [ | 0.930 | 0.722 | 0.435 | 1e-141 | |
| 8393919 | 752 | neuroendocrine convertase 1 precursor [R | 0.930 | 0.724 | 0.438 | 1e-140 | |
| 410948990 | 753 | PREDICTED: neuroendocrine convertase 1 i | 0.930 | 0.723 | 0.435 | 1e-140 | |
| 355750077 | 753 | Neuroendocrine convertase 1 [Macaca fasc | 0.921 | 0.717 | 0.437 | 1e-140 | |
| 344265939 | 753 | PREDICTED: neuroendocrine convertase 1 i | 0.930 | 0.723 | 0.436 | 1e-140 | |
| 380813408 | 749 | neuroendocrine convertase 1 isoform 1 pr | 0.921 | 0.720 | 0.437 | 1e-140 | |
| 301782109 | 753 | PREDICTED: neuroendocrine convertase 1-l | 0.930 | 0.723 | 0.433 | 1e-140 | |
| 355691492 | 753 | Neuroendocrine convertase 1 [Macaca mula | 0.921 | 0.717 | 0.437 | 1e-140 | |
| 35318 | 753 | PC1/PC3 [Homo sapiens] | 0.921 | 0.717 | 0.437 | 1e-140 |
| >gi|242011084|ref|XP_002426287.1| Furin-1 precursor, putative [Pediculus humanus corporis] gi|212510350|gb|EEB13549.1| Furin-1 precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/603 (45%), Positives = 372/603 (61%), Gaps = 46/603 (7%)
Query: 2 HVGVERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHY------LFSKKQH 55
H G E +++ N+WV+ + G D+A ++ LG+ G + G ++ Y +F +K+
Sbjct: 22 HNGEEHTKYYSNEWVIRLEGGQDVAELISAKLGYKLLGKVTGFNDTYRIIKEDIFIQKKR 81
Query: 56 NHKTPEETTFETVGLLNDARVIWTQQQFAKHLRKRAEI-------------QELRRQ--- 99
NH ET L D+RVIW +QQF K KR + ++L RQ
Sbjct: 82 NHALLTET------LEKDSRVIWAEQQFTKERVKRGFLYDNSLSTVYNENNEKLTRQSIL 135
Query: 100 --LRAMSQIYRKE------TEVS-KYEGM--FTDEWWPMQWYEQDYRLSNSSKKLDLNIV 148
L+ + Y +E ++VS +Y F DE W QWY QD R ++ KLDL+++
Sbjct: 136 NLLKEKNISYNQEKILFRPSDVSMRYASYDRFNDELWNQQWYLQDTRTQSNLPKLDLHVL 195
Query: 149 PVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRY-EDPRNKH 207
PVY +L I G GV ++I+DDG+EYTHED+ +++ PE+SY+ N E D PR E+ N H
Sbjct: 196 PVY-DLGITGKGVRVLILDDGIEYTHEDLWENYDPEISYDANDEDDDPFPRLDEEGSNAH 254
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSW 267
GTRCAGE+ MK NN KCGVGV + ARVG ++LLDGE D IE AL + DKVDIYS SW
Sbjct: 255 GTRCAGEVAMKANNLKCGVGVAFNARVGALRLLDGEVNDRIEGIALGYAYDKVDIYSASW 314
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYT 327
GP DDGK+++GPG+L+K AI+RG+ EGR GKGV++V+A GNG DNC DGYI SIYT
Sbjct: 315 GPTDDGKTVEGPGRLAKEAIERGVTEGRNGKGVIYVWAGGNGGSKDDNCDCDGYIGSIYT 374
Query: 328 IAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIA 387
++I SA + GQ P+Y E+C +A YS G I TTDV NTCT +H+GTSA+AP+A
Sbjct: 375 LSIGSASQHGQFPWYGEKCAATMAATYSSGAYADQMIATTDVGNTCTIKHTGTSASAPLA 434
Query: 388 AGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFK 447
AG++ALALEAN ++TWRD QH++AWTSE PLS GW NA W ++ +GFGL+N +
Sbjct: 435 AGIIALALEANSDLTWRDIQHLVAWTSEYSPLSENEGWVMNAAGFWVNTRFGFGLMNAYS 494
Query: 448 LVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHAT 507
LV+ A NW NVP + C I + G + Y W + N+ + D V YLEHV
Sbjct: 495 LVAAAINWTNVPEKYSCSI--EAGKKSEEIY---WGKDVNLEINATVCDYVYYLEHVELE 549
Query: 508 LNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFE 567
+NIE+P RG++ I L +PSG L+ R D K GF +W ++++ W E+P G WK
Sbjct: 550 INIEYPVRGNLEIFLESPSGTNIQLLGRRKNDSSKRGFKNWKLMSVLTWNENPRGIWKVT 609
Query: 568 IFD 570
+ D
Sbjct: 610 VTD 612
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|149726484|ref|XP_001504658.1| PREDICTED: neuroendocrine convertase 1 [Equus caballus] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/570 (43%), Positives = 356/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAF 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K KR+ +++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERSKRSILRDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI D++ PE
Sbjct: 126 WNQQWYLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYDNYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W +VP + +C + + +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWSSVPEKKECVVKDNDFEPRALTANG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIIEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+P+G W I D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPIGTWTLRITD 573
|
Source: Equus caballus Species: Equus caballus Genus: Equus Family: Equidae Order: Perissodactyla Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|8393919|ref|NP_058787.1| neuroendocrine convertase 1 precursor [Rattus norvegicus] gi|392345507|ref|XP_003749285.1| PREDICTED: neuroendocrine convertase 1-like isoform 1 [Rattus norvegicus] gi|128001|sp|P28840.1|NEC1_RAT RecName: Full=Neuroendocrine convertase 1; Short=NEC 1; AltName: Full=Prohormone convertase 1; AltName: Full=Proprotein convertase 1; Short=PC1; Flags: Precursor gi|203509|gb|AAA40945.1| hormone convertase [Rattus norvegicus] gi|149058898|gb|EDM09905.1| proprotein convertase subtilisin/kexin type 1 [Rattus norvegicus] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/570 (43%), Positives = 354/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIHGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAL 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K RKR+ ++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERRKRSVPRDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ S KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTASLPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W NVP + +C I +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRNVPEKKECIIKDNNFEPRALKANG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + + LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIVEIPTRACEGQENAINSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+PVG W ++ D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPVGTWTLKVTD 573
|
Source: Rattus norvegicus Species: Rattus norvegicus Genus: Rattus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|410948990|ref|XP_003981208.1| PREDICTED: neuroendocrine convertase 1 isoform 1 [Felis catus] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/570 (43%), Positives = 355/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKRQFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAF 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K KR+ +++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERSKRSVLRDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ S KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTASLPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEFGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWTSVPEKKECVVKDNEFEPRALKGNG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIIEIPTRACEEQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+P+G W I D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPIGTWTLRITD 573
|
Source: Felis catus Species: Felis catus Genus: Felis Family: Felidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|355750077|gb|EHH54415.1| Neuroendocrine convertase 1 [Macaca fascicularis] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/565 (43%), Positives = 353/565 (62%), Gaps = 25/565 (4%)
Query: 10 HFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG 69
F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++ T
Sbjct: 30 QFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAFHITKR 89
Query: 70 LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQW 129
L +D RVIW +QQ+ K KR+ I++ + +F D W QW
Sbjct: 90 LSDDDRVIWAEQQYEKERTKRSAIKD-------------------SAQNLFNDPMWNQQW 130
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNF 189
Y QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE SY+F
Sbjct: 131 YLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDF 189
Query: 190 NAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL 247
N D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD
Sbjct: 190 NDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDA 248
Query: 248 IESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307
IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+G
Sbjct: 249 IEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASG 308
Query: 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT 367
NG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I +
Sbjct: 309 NGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSA 368
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++ GW++
Sbjct: 369 DLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKK 428
Query: 428 NARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 429 NGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIE 488
Query: 486 FNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGF 545
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF
Sbjct: 489 IPTKACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGF 548
Query: 546 VDWSILTLKHWGEDPVGEWKFEIFD 570
+W +++ WGE+PVG W I D
Sbjct: 549 KNWDFMSVHTWGENPVGTWTLRITD 573
|
Source: Macaca fascicularis Species: Macaca fascicularis Genus: Macaca Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|344265939|ref|XP_003405038.1| PREDICTED: neuroendocrine convertase 1 isoform 1 [Loxodonta africana] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/570 (43%), Positives = 354/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
VE F+N+W ISG P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VEAKRQFVNEWAAEISGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAF 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K KR +++ L F D
Sbjct: 85 HITKRLSDDERVIWAEQQYEKERSKRTALKDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE
Sbjct: 126 WNQQWYLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN+KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNNKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W +V + +C + +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWSSVSEKKECVVKDNDFEPRALKANG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIIEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+PVG W I D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPVGTWTLRITD 573
|
Source: Loxodonta africana Species: Loxodonta africana Genus: Loxodonta Family: Elephantidae Order: Proboscidea Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|380813408|gb|AFE78578.1| neuroendocrine convertase 1 isoform 1 preproprotein [Macaca mulatta] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/565 (43%), Positives = 353/565 (62%), Gaps = 25/565 (4%)
Query: 10 HFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG 69
F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++ T
Sbjct: 30 QFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAFHITKR 89
Query: 70 LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQW 129
L +D RVIW +QQ+ K KR+ I++ + +F D W QW
Sbjct: 90 LSDDDRVIWAEQQYEKERTKRSAIKD-------------------SAQNLFNDPMWNQQW 130
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNF 189
Y QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE SY+F
Sbjct: 131 YLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDF 189
Query: 190 NAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL 247
N D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD
Sbjct: 190 NDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDA 248
Query: 248 IESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307
IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+G
Sbjct: 249 IEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASG 308
Query: 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT 367
NG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I +
Sbjct: 309 NGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSA 368
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++ GW++
Sbjct: 369 DLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKK 428
Query: 428 NARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 429 NGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIE 488
Query: 486 FNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGF 545
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF
Sbjct: 489 IPTKACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGF 548
Query: 546 VDWSILTLKHWGEDPVGEWKFEIFD 570
+W +++ WGE+PVG W I D
Sbjct: 549 KNWDFMSVHTWGENPVGTWTLRITD 573
|
Source: Macaca mulatta Species: Macaca mulatta Genus: Macaca Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|301782109|ref|XP_002926469.1| PREDICTED: neuroendocrine convertase 1-like [Ailuropoda melanoleuca] gi|281342115|gb|EFB17699.1| hypothetical protein PANDA_016118 [Ailuropoda melanoleuca] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/570 (43%), Positives = 355/570 (62%), Gaps = 25/570 (4%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETT 64
V+ + F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 25 VKAKKQFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAF 84
Query: 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEW 124
T L +D RVIW +QQ+ K KR+ +++ L F D
Sbjct: 85 HITKRLSDDDRVIWAEQQYEKERSKRSVLRDSALNL-------------------FNDPM 125
Query: 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
W QWY QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI +++ PE
Sbjct: 126 WNQQWYLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYENYDPE 184
Query: 185 LSYNFNAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242
SY+FN D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG
Sbjct: 185 ASYDFNDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDG 243
Query: 243 ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302
TD IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +F
Sbjct: 244 IVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIF 303
Query: 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362
V+A+GNG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G
Sbjct: 304 VWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQ 363
Query: 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
+I + D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL +
Sbjct: 364 RITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLDNN 423
Query: 423 SGWERNARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYAS 480
GW++N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 424 PGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWTSVPEKKECVVKDNDFEPRALKGNG 483
Query: 481 SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDD 540
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D
Sbjct: 484 EVIIEIPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDT 543
Query: 541 CKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570
GF +W +++ WGE+P+G W I D
Sbjct: 544 SPNGFKNWDFMSVHTWGENPIGTWTLRITD 573
|
Source: Ailuropoda melanoleuca Species: Ailuropoda melanoleuca Genus: Ailuropoda Family: Ursidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|355691492|gb|EHH26677.1| Neuroendocrine convertase 1 [Macaca mulatta] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/565 (43%), Positives = 353/565 (62%), Gaps = 25/565 (4%)
Query: 10 HFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG 69
F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++ T
Sbjct: 30 QFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAFHITKR 89
Query: 70 LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQW 129
L +D RVIW +QQ+ K KR+ I++ + +F D W QW
Sbjct: 90 LSDDDRVIWAEQQYEKERTKRSAIKD-------------------SAQNLFNDPMWNQQW 130
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNF 189
Y QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE SY+F
Sbjct: 131 YLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDF 189
Query: 190 NAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL 247
N D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD
Sbjct: 190 NDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDA 248
Query: 248 IESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307
IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+G
Sbjct: 249 IEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASG 308
Query: 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT 367
NG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I +
Sbjct: 309 NGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSA 368
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++ GW++
Sbjct: 369 DLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKK 428
Query: 428 NARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 429 NGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIE 488
Query: 486 FNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGF 545
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF
Sbjct: 489 IPTKACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGF 548
Query: 546 VDWSILTLKHWGEDPVGEWKFEIFD 570
+W +++ WGE+PVG W I D
Sbjct: 549 KNWDFMSVHTWGENPVGTWTLRITD 573
|
Source: Macaca mulatta Species: Macaca mulatta Genus: Macaca Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|35318|emb|CAA46031.1| PC1/PC3 [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/565 (43%), Positives = 353/565 (62%), Gaps = 25/565 (4%)
Query: 10 HFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVG 69
F+N+W I G P+ A+ +A++LG+ G I L+NHYLF K H ++ T
Sbjct: 30 QFVNEWAAEIPGGPEAASAIAEELGYDLLGQIGSLENHYLFKHKNHPRRSRRSAFHITKR 89
Query: 70 LLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQW 129
L +D RVIW +QQ+ K KR+ +++ L F D W QW
Sbjct: 90 LSDDDRVIWAEQQYEKERSKRSALRDSALNL-------------------FNDPMWNQQW 130
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNF 189
Y QD R++ + KLDL+++PV+Q+ I G GV I ++DDG+E+ H DI ++ PE SY+F
Sbjct: 131 YLQDTRMTAALPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDF 189
Query: 190 NAEKWDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL 247
N D PRY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD
Sbjct: 190 NDNDHDPFPRY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDA 248
Query: 248 IESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307
IE+ ++ F VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+G
Sbjct: 249 IEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASG 308
Query: 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT 367
NG GDNC DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YSGG +I +
Sbjct: 309 NGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSGGDYTDQRITSA 368
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
D+HN CT H+GTSA+AP+AAG+ ALALEANPN+TWRD QH++ WTSE +PL++ GW++
Sbjct: 369 DLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKK 428
Query: 428 NARDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS 485
N L +S +GFGL+N LV LA + W +VP + +C + +
Sbjct: 429 NGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIE 488
Query: 486 FNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGF 545
C + +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF
Sbjct: 489 IPTRACEGQENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGF 548
Query: 546 VDWSILTLKHWGEDPVGEWKFEIFD 570
+W +++ WGE+P+G W I D
Sbjct: 549 KNWDFMSVHTWGENPIGTWTLRITD 573
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 586 | ||||||
| RGD|3272 | 752 | Pcsk1 "proprotein convertase s | 0.822 | 0.640 | 0.417 | 1.2e-123 | |
| UNIPROTKB|E2QX69 | 753 | PCSK1 "Uncharacterized protein | 0.824 | 0.641 | 0.408 | 8.2e-123 | |
| UNIPROTKB|F1RNV5 | 753 | PCSK1 "Uncharacterized protein | 0.824 | 0.641 | 0.410 | 1.1e-122 | |
| UNIPROTKB|F1MFR6 | 753 | PCSK1 "Neuroendocrine converta | 0.824 | 0.641 | 0.410 | 1.1e-122 | |
| UNIPROTKB|P29120 | 753 | PCSK1 "Neuroendocrine converta | 0.824 | 0.641 | 0.410 | 1.3e-122 | |
| UNIPROTKB|Q9GLR1 | 753 | PCSK1 "Neuroendocrine converta | 0.825 | 0.642 | 0.406 | 9.4e-122 | |
| MGI|MGI:97511 | 753 | Pcsk1 "proprotein convertase s | 0.829 | 0.645 | 0.408 | 5.1e-121 | |
| UNIPROTKB|F1NB95 | 745 | PCSK1 "Uncharacterized protein | 0.815 | 0.641 | 0.422 | 1.1e-120 | |
| ZFIN|ZDB-GENE-071009-1 | 755 | pcsk1 "proprotein convertase s | 0.931 | 0.723 | 0.407 | 3.7e-119 | |
| ZFIN|ZDB-GENE-060531-130 | 1821 | pcsk5a "proprotein convertase | 0.803 | 0.258 | 0.393 | 1.2e-102 |
| RGD|3272 Pcsk1 "proprotein convertase subtilisin/kexin type 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1053 (375.7 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 207/496 (41%), Positives = 292/496 (58%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYE-----GMFTDEWWPMQWYEQDYRLSN 138
A H+ KR + R + A Q Y KE +F D W QWY QD R++
Sbjct: 83 ALHITKRLSDDD--RVIWAEQQ-YEKERRKRSVPRDSALNLFNDPMWNQQWYLQDTRMTA 139
Query: 139 SSKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITP 198
S KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D P
Sbjct: 140 SLPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFP 198
Query: 199 RYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFG 256
RY DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 199 RY-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFN 257
Query: 257 LDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC 316
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC
Sbjct: 258 PGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNC 317
Query: 317 AADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCE 376
DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT
Sbjct: 318 DCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTET 377
Query: 377 HSGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS 436
H+GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S
Sbjct: 378 HTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNS 437
Query: 437 AYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDT 494
+GFGL+N LV LA + W NVP + +C I + C
Sbjct: 438 RFGFGLLNAKALVDLADPRTWRNVPEKKECIIKDNNFEPRALKANGEVIVEIPTRACEGQ 497
Query: 495 VDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLK 554
+ + LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++
Sbjct: 498 ENAINSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVH 557
Query: 555 HWGEDPVGEWKFEIFD 570
WGE+PVG W ++ D
Sbjct: 558 TWGENPVGTWTLKVTD 573
|
|
| UNIPROTKB|E2QX69 PCSK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 202/495 (40%), Positives = 295/495 (59%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYE----GMFTDEWWPMQWYEQDYRLSNS 139
A H+ KR + R + A Q ++ ++ S +F D W QWY QD R++ +
Sbjct: 83 ALHITKRLSDDD--RVIWAEQQYEKERSKRSVLRDSALNLFNDPMWNQQWYLQDTRVTAA 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPR 199
Query: 200 YEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL 257
Y DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 200 Y-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNP 258
Query: 258 DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA 317
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GD+C
Sbjct: 259 GHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDDCD 318
Query: 318 ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH 377
DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H
Sbjct: 319 CDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETH 378
Query: 378 SGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
+GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S
Sbjct: 379 TGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSR 438
Query: 438 YGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTV 495
+GFGL+N LV LA + W +VP + +C + + C +
Sbjct: 439 FGFGLLNAKALVDLADPRTWTSVPEKKECVVKDNNFEPRALKGNGEVIIEIPTRACEEQE 498
Query: 496 DEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKH 555
+ +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++
Sbjct: 499 NAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVHT 558
Query: 556 WGEDPVGEWKFEIFD 570
WGE+P+G W I D
Sbjct: 559 WGENPIGTWTLRITD 573
|
|
| UNIPROTKB|F1RNV5 PCSK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 203/495 (41%), Positives = 294/495 (59%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYE----GMFTDEWWPMQWYEQDYRLSNS 139
A H+ KR + R + A Q ++ ++ S +F D W QWY QD R++ +
Sbjct: 83 ALHITKRLSDDD--RVIWAEQQYEKERSKRSLLRDSALNLFNDPMWNQQWYLQDTRMTAA 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPR 199
Query: 200 YEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL 257
Y DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 200 Y-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNP 258
Query: 258 DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA 317
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC
Sbjct: 259 GHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCD 318
Query: 318 ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH 377
DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H
Sbjct: 319 CDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETH 378
Query: 378 SGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
+GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S
Sbjct: 379 TGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSR 438
Query: 438 YGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTV 495
+GFGL+N LV LA + W +VP + +C + + C
Sbjct: 439 FGFGLLNAKALVDLADPRTWSSVPEKKECVVKDNDFEPRALKANGEVIIEIPTRACEGQE 498
Query: 496 DEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKH 555
+ +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++
Sbjct: 499 NAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTGTVLLAERERDTSPNGFKNWDFMSVHT 558
Query: 556 WGEDPVGEWKFEIFD 570
WGE+P+G W I D
Sbjct: 559 WGENPIGTWTLRITD 573
|
|
| UNIPROTKB|F1MFR6 PCSK1 "Neuroendocrine convertase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 203/495 (41%), Positives = 293/495 (59%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEG----MFTDEWWPMQWYEQDYRLSNS 139
A H+ KR + R + A Q ++ ++ S +F D W QWY QD R++ +
Sbjct: 83 ALHITKRLSDDD--RVIWAEQQYEKERSKRSVLRDSALDLFNDPMWNQQWYLQDTRMTAT 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPR 199
Query: 200 YEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL 257
Y DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 200 Y-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNP 258
Query: 258 DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA 317
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC
Sbjct: 259 GHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCD 318
Query: 318 ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH 377
DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H
Sbjct: 319 CDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETH 378
Query: 378 SGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
+GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S
Sbjct: 379 TGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSR 438
Query: 438 YGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTV 495
+GFGL+N LV LA W +VP + +C + + C
Sbjct: 439 FGFGLLNAKALVDLADPSTWSSVPEKKECVVKDNDFEPRALKANGEVIIEIPTRACEGQE 498
Query: 496 DEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKH 555
+ +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++
Sbjct: 499 NAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVHT 558
Query: 556 WGEDPVGEWKFEIFD 570
WGE+P+G W I D
Sbjct: 559 WGENPIGTWTLRIAD 573
|
|
| UNIPROTKB|P29120 PCSK1 "Neuroendocrine convertase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1049 (374.3 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 203/495 (41%), Positives = 294/495 (59%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYE----GMFTDEWWPMQWYEQDYRLSNS 139
A H+ KR + R + A Q ++ ++ S +F D W QWY QD R++ +
Sbjct: 83 AFHITKRLSDDD--RVIWAEQQYEKERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAA 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPR 199
Query: 200 YEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL 257
Y DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 200 Y-DPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNP 258
Query: 258 DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA 317
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC
Sbjct: 259 GHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCD 318
Query: 318 ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH 377
DGY +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H
Sbjct: 319 CDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETH 378
Query: 378 SGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
+GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S
Sbjct: 379 TGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSR 438
Query: 438 YGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTV 495
+GFGL+N LV LA + W +VP + +C + + C
Sbjct: 439 FGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANGEVIIEIPTRACEGQE 498
Query: 496 DEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKH 555
+ +K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++
Sbjct: 499 NAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVHT 558
Query: 556 WGEDPVGEWKFEIFD 570
WGE+P+G W I D
Sbjct: 559 WGENPIGTWTLRITD 573
|
|
| UNIPROTKB|Q9GLR1 PCSK1 "Neuroendocrine convertase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1037 (370.1 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 201/494 (40%), Positives = 290/494 (58%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEG----MFTDEWWPMQWYEQDYRLSNS 139
A H+ KR + R + A Q ++ ++ S +F D W QWY QD R++ +
Sbjct: 83 ALHITKRLSDDD--RVIWAEQQYEKERSKRSVLRDSALDLFNDPMWNQQWYLQDTRMTAT 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ PE SY+FN D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPR 199
Query: 200 YE-DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLD 258
Y+ NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ + F
Sbjct: 200 YDLINENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASLIGFNPG 259
Query: 259 KVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAA 318
VDIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC
Sbjct: 260 HVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDC 319
Query: 319 DGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHS 378
DGY +SIYTI+I SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H+
Sbjct: 320 DGYTDSIYTISINSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETHT 379
Query: 379 GTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAY 438
GTS EANPN+TWRD QH++ WTSE +PL++ GW++N L +S +
Sbjct: 380 GTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRF 439
Query: 439 GFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVD 496
GFGL+N LV LA W +VP + +C + + C +
Sbjct: 440 GFGLLNAKALVDLADPSTWSSVPEKKECVVKDNDFEPRALKANGEVIIEIPTRACEGQEN 499
Query: 497 EVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHW 556
+K LEHV IE+ RRGD+ + LT+ +G +VL+ R +D GF +W +++ W
Sbjct: 500 AIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVHTW 559
Query: 557 GEDPVGEWKFEIFD 570
GE+P+G W I D
Sbjct: 560 GENPIGTWTLRIAD 573
|
|
| MGI|MGI:97511 Pcsk1 "proprotein convertase subtilisin/kexin type 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 201/492 (40%), Positives = 288/492 (58%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGM--FTDEWWPMQWYEQDYRLSNSSK 141
A H+ KR + + R + V K + F D W QWY QD R++ +
Sbjct: 83 ALHITKRLSDDDRVTWAEQQYEKERSKRSVQKDSALDLFNDPMWNQQWYLQDTRMTAALP 142
Query: 142 KLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPRYE 201
KLDL+++PV+++ +E+ H DI ++ PE SY+FN D PRY+
Sbjct: 143 KLDLHVIPVWEK-GITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYD 201
Query: 202 -DPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKV 260
NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F V
Sbjct: 202 LTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHV 261
Query: 261 DIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADG 320
DIYS SWGP DDGK+++GPG+L++ A + G+++GRQGKG +FV+A+GNG GDNC DG
Sbjct: 262 DIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDG 321
Query: 321 YINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380
Y +SIYTI+I+SA + G SP+Y+E+C+ +AT+YS G +I + D+HN CT H+GT
Sbjct: 322 YTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETHTGT 381
Query: 381 SXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGF 440
S EANPN+TWRD QH++ WTSE +PL+ GW++N L +S +GF
Sbjct: 382 SASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLASNPGWKKNGAGLMVNSRFGF 441
Query: 441 GLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEV 498
GL+N LV LA + W NVP + +C + + C + +
Sbjct: 442 GLLNAKALVDLADPRTWRNVPEKKECVVKDNNFEPRALKANGEVIVEIPTRACEGQENAI 501
Query: 499 KYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGE 558
K LEHV IE+ RRGD+ + LT+ G +VL+ R +D GF +W +++ WGE
Sbjct: 502 KSLEHVQFEATIEYSRRGDLHVTLTSAVGTSTVLLAERERDTSPNGFKNWDFMSVHTWGE 561
Query: 559 DPVGEWKFEIFD 570
+PVG W +I D
Sbjct: 562 NPVGTWTLKITD 573
|
|
| UNIPROTKB|F1NB95 PCSK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 210/497 (42%), Positives = 292/497 (58%)
Query: 84 AKHLRKRAEIQELRRQLRAMSQIYRKETE----VSKYEGMFTDEWWPMQWYEQDYRLSNS 139
A H+ KR E R A Q +K T+ E +F D W QWY QD R++ S
Sbjct: 83 AIHITKRLSDDE--RVSWAEQQYEKKRTKRAAVTDSAENLFNDPMWNQQWYLQDTRITPS 140
Query: 140 SKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199
KLDL+++PV+Q+ +E+ H DI ++ P SY+FN +D PR
Sbjct: 141 LPKLDLHVIPVWQK-GITGRGVVITVLDDGLEWNHTDIYANYDPRASYDFNDNDYDPFPR 199
Query: 200 YEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL 257
Y DP NKHGTRCAGE+ M+ NN KCGVGV Y ++VGG+++LDG TD IE+ ++ F
Sbjct: 200 Y-DPTNENKHGTRCAGEIAMQANNRKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNP 258
Query: 258 DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA 317
+ VDIYS SWGP DDGK+++GPG+L++ A + GI++GR GKG +FV+A+GNG GDNC
Sbjct: 259 EHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGIKQGRNGKGSIFVWASGNGGRQGDNCD 318
Query: 318 ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH 377
DGY +SIYTI+I+SA + G SP+Y+E+C+ +ATAYS G +I + D+HN CT H
Sbjct: 319 CDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATAYSSGDYTDQRITSADLHNECTGTH 378
Query: 378 SGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
+GTS E +PN+TWRD QH++ WTSE +PL+ GW++N L +S
Sbjct: 379 TGTSASAPLGVGLAL---EYSPNLTWRDMQHLVVWTSEYDPLAGNPGWKKNGAGLMVNSR 435
Query: 438 YGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITP--CSD 493
+GFGL+N LV LA K W VP + +C I D A+ + I C
Sbjct: 436 FGFGLLNANALVDLADPKRWKGVPEKREC-IVQDKSFEPRLLRANE-EVIIEIPTKACEG 493
Query: 494 TVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTL 553
+ + LEHV IE+ RRGD+ + L +PSG +VL+ R +D GF +W +++
Sbjct: 494 QENSIASLEHVQLEATIEYSRRGDLHVTLVSPSGTSTVLLAERERDKSPNGFKNWDFMSV 553
Query: 554 KHWGEDPVGEWKFEIFD 570
WGE+P G W I D
Sbjct: 554 HTWGENPTGTWVLRITD 570
|
|
| ZFIN|ZDB-GENE-071009-1 pcsk1 "proprotein convertase subtilisin/kexin type 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1173 (418.0 bits), Expect = 3.7e-119, P = 3.7e-119
Identities = 230/564 (40%), Positives = 329/564 (58%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGL 70
+LN+W V I G A +A + G+ I L+NHYLF + H +T T L
Sbjct: 29 YLNEWAVEIPGGVQNARSIADEFGYQLVRQIGALENHYLFKRHSHPSRTKRSADHITKRL 88
Query: 71 LNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWY 130
D RV W +QQ+ K KRA + + K+ V K +F D W QWY
Sbjct: 89 SEDDRVSWAEQQYEKRRAKRAPLG-----------VECKDCSVDK---LFDDPMWNQQWY 134
Query: 131 EQDYRLSNSSKKLDLNIVPVYQELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFN 190
QD R S+S KLDL+++PV+++ +E+ H DI ++ P SY+FN
Sbjct: 135 LQDTRTSSSLPKLDLHVIPVWKK-GITGKGVVITVLDDGLEWNHTDIYPNYDPAASYDFN 193
Query: 191 AEKWDITPRYEDPR-NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIE 249
D PRY+ NKHGTRCAGE+ M+ +N+KCGVGV Y ++VGG+++LDG TD IE
Sbjct: 194 DNDPDPFPRYDSTNENKHGTRCAGEIAMQADNNKCGVGVAYNSKVGGIRMLDGIVTDAIE 253
Query: 250 SKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG 309
+ ++ + D VDIYS SWGP DDGK+++GPG+L++ A + GI++GR GKG +FV+A+GNG
Sbjct: 254 ASSIGYNPDHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGIQKGRGGKGSIFVWASGNG 313
Query: 310 KYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDV 369
GDNC DGY +S+YTI+I+SA + G SP+Y+E+C+ +ATAYS G +I + D+
Sbjct: 314 GRQGDNCDCDGYTDSLYTISISSASQQGLSPWYAEKCSSTLATAYSSGDYTDQRITSADL 373
Query: 370 HNTCTCEHSGTSXXXXXXXXXXXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNA 429
HN CT H+GTS E NP++TWRD QH++ WTSE +PL++ GW+RN
Sbjct: 374 HNECTETHTGTSASAPLAAGIFALALEQNPDLTWRDLQHLVVWTSEFDPLANNPGWKRNG 433
Query: 430 RDLWFHSAYGFGLINTFKLVSLA--KNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFN 487
L +S +GFGL+N LV LA K W +VP + +C + + A
Sbjct: 434 AGLMVNSRFGFGLLNAKALVDLADPKVWKHVPEKKQCIVRDETFQPRPLKAAGEISIEIP 493
Query: 488 ITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVD 547
C+ + V LEHV ++IE+ RRGD+ I LT+PSG +VL+ R +D GF +
Sbjct: 494 TKACAGQANSVMSLEHVQVEVSIEYTRRGDLHITLTSPSGTTTVLLAERERDTSSNGFRN 553
Query: 548 WSILTLKHWGEDPVGEWKFEIFDT 571
W+ +++ WGE+P G W +I DT
Sbjct: 554 WAFMSVHTWGENPTGTWILKITDT 577
|
|
| ZFIN|ZDB-GENE-060531-130 pcsk5a "proprotein convertase subtilisin/kexin type 5a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 946 (338.1 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 190/483 (39%), Positives = 271/483 (56%)
Query: 92 EIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVY 151
+++ +++Q+ ++ R ET ++G F D W WY + + D+NI +
Sbjct: 68 KVEWIQQQM-VQKRVKRTETMDQTHDGSFNDPKWDSMWYIH----CDHNCLTDMNIQAAW 122
Query: 152 QELXXXXXXXXXXXXXXXMEYTHEDIKDSFAPELSYNFNAEKWDITPRYE-DPRNKHGTR 210
+ +E H D+K ++ SY+ N D TPRY+ NKHGTR
Sbjct: 123 RR-GYTGKGVVVSILDDGIERQHPDLKQNYDARASYDVNGNDPDPTPRYDVTNENKHGTR 181
Query: 211 CAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPP 270
CAG + NNS C VG+ Y A++GGV++LDG+ TD++E+++L +DIYS SWGP
Sbjct: 182 CAGVVAASANNSLCIVGIAYNAKIGGVRMLDGDMTDMVEAQSLNLRQQYIDIYSSSWGPD 241
Query: 271 DDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAI 330
DDG+++DGPG L++ A++ GIR+GR+G+G +FV+A+GNG + D+C+ DGY NSIYTI++
Sbjct: 242 DDGRTVDGPGPLARLALENGIRKGRKGRGSIFVWASGNGGQSQDHCSCDGYTNSIYTISV 301
Query: 331 ASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSXXXXXXXXX 390
S + G+ P+Y EEC+ +AT YS G S ++TTD+ CT EHSGTS
Sbjct: 302 GSTTQSGRKPWYLEECSSTLATTYSSGDSHSPGVVTTDLRQRCTDEHSGTSASAPMAAGI 361
Query: 391 XXXXXEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVS 450
EANP +TWRD QHI+ TS R LS S W+ N YGFGL+N +V
Sbjct: 362 IALTLEANPALTWRDIQHIIVKTSSRGHLS-ASDWQSNGAGYDVSHLYGFGLLNAEAMVK 420
Query: 451 LAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRS-FNITPCS-DTVDEVKYLEHVHATL 508
A+ W VP+Q CE ++G + RS + CS + V YLEHV +
Sbjct: 421 NAETWKQVPSQHICEE--NIGQNARIISPERVLRSVLKSSGCSAQRLQRVVYLEHVIVRV 478
Query: 509 NIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEI 568
I HP RGD+ I LT+PSG S L+ RP D GF+ W +T WGE G+W +I
Sbjct: 479 TITHPHRGDLSITLTSPSGTTSQLLANRPNDHSSEGFIKWEFMTTHCWGERLAGDWILDI 538
Query: 569 FDT 571
DT
Sbjct: 539 RDT 541
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P13134 | KEX2_YEAST | 3, ., 4, ., 2, 1, ., 6, 1 | 0.375 | 0.8839 | 0.6363 | yes | N/A |
| P09231 | KEX1A_KLULA | 3, ., 4, ., 2, 1, ., - | 0.3525 | 0.9112 | 0.7063 | yes | N/A |
| P63239 | NEC1_MOUSE | 3, ., 4, ., 2, 1, ., 9, 3 | 0.4305 | 0.9317 | 0.7250 | yes | N/A |
| Q09175 | KRP1_SCHPO | 3, ., 4, ., 2, 1, ., - | 0.3667 | 0.8054 | 0.6657 | yes | N/A |
| P28840 | NEC1_RAT | 3, ., 4, ., 2, 1, ., 9, 3 | 0.4385 | 0.9300 | 0.7247 | yes | N/A |
| Q9GLR1 | NEC1_BOVIN | 3, ., 4, ., 2, 1, ., 9, 3 | 0.4305 | 0.9317 | 0.7250 | yes | N/A |
| P29120 | NEC1_HUMAN | 3, ., 4, ., 2, 1, ., 9, 3 | 0.4353 | 0.9215 | 0.7171 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 586 | |||
| cd04059 | 297 | cd04059, Peptidases_S8_Protein_convertases_Kexins_ | 1e-138 | |
| pfam00082 | 277 | pfam00082, Peptidase_S8, Subtilase family | 2e-58 | |
| cd00306 | 241 | cd00306, Peptidases_S8_S53, Peptidase domain in th | 1e-31 | |
| pfam01483 | 87 | pfam01483, P_proprotein, Proprotein convertase P-d | 4e-29 | |
| cd07498 | 242 | cd07498, Peptidases_S8_15, Peptidase S8 family dom | 1e-28 | |
| cd07473 | 259 | cd07473, Peptidases_S8_Subtilisin_like, Peptidase | 7e-24 | |
| cd04848 | 267 | cd04848, Peptidases_S8_Autotransporter_serine_prot | 1e-21 | |
| cd07477 | 229 | cd07477, Peptidases_S8_Subtilisin_subset, Peptidas | 4e-17 | |
| cd07484 | 260 | cd07484, Peptidases_S8_Thermitase_like, Peptidase | 2e-16 | |
| COG4935 | 177 | COG4935, COG4935, Regulatory P domain of the subti | 5e-16 | |
| COG1404 | 508 | COG1404, AprE, Subtilisin-like serine proteases [P | 4e-15 | |
| cd07474 | 295 | cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid | 4e-15 | |
| cd07487 | 264 | cd07487, Peptidases_S8_1, Peptidase S8 family doma | 5e-13 | |
| cd07485 | 273 | cd07485, Peptidases_S8_Fervidolysin_like, Peptidas | 7e-13 | |
| cd04077 | 255 | cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep | 2e-12 | |
| cd07489 | 312 | cd07489, Peptidases_S8_5, Peptidase S8 family doma | 3e-11 | |
| cd07481 | 264 | cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep | 8e-11 | |
| cd07480 | 297 | cd07480, Peptidases_S8_12, Peptidase S8 family dom | 1e-09 | |
| cd04842 | 293 | cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 | 2e-09 | |
| cd07490 | 254 | cd07490, Peptidases_S8_6, Peptidase S8 family doma | 5e-09 | |
| cd07494 | 298 | cd07494, Peptidases_S8_10, Peptidase S8 family dom | 2e-08 | |
| cd05562 | 275 | cd05562, Peptidases_S53_like, Peptidase domain in | 2e-08 | |
| cd07496 | 285 | cd07496, Peptidases_S8_13, Peptidase S8 family dom | 3e-08 | |
| cd04843 | 277 | cd04843, Peptidases_S8_11, Peptidase S8 family dom | 9e-08 | |
| cd07492 | 222 | cd07492, Peptidases_S8_8, Peptidase S8 family doma | 1e-07 | |
| cd07491 | 247 | cd07491, Peptidases_S8_7, Peptidase S8 family doma | 2e-06 | |
| PTZ00262 | 639 | PTZ00262, PTZ00262, subtilisin-like protease; Prov | 2e-05 | |
| TIGR03921 | 350 | TIGR03921, T7SS_mycosin, type VII secretion-associ | 2e-05 | |
| cd07475 | 346 | cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 | 3e-05 | |
| cd07482 | 294 | cd07482, Peptidases_S8_Lantibiotic_specific_protea | 1e-04 | |
| cd07483 | 291 | cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti | 1e-04 | |
| cd05561 | 239 | cd05561, Peptidases_S8_4, Peptidase S8 family doma | 7e-04 | |
| cd07488 | 247 | cd07488, Peptidases_S8_2, Peptidase S8 family doma | 0.004 |
| >gnl|CDD|173789 cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases | Back alignment and domain information |
|---|
Score = 402 bits (1036), Expect = e-138
Identities = 154/298 (51%), Positives = 209/298 (70%), Gaps = 5/298 (1%)
Query: 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKD 179
D +P QWY ++ + + LDLN+ P + E I G GV + ++DDG+E TH D+KD
Sbjct: 1 PNDPLFPYQWYLKNTGQAGGTPGLDLNVTPAW-EQGITGKGVTVAVVDDGLEITHPDLKD 59
Query: 180 SFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239
++ PE SY+FN D TPRY+D N HGTRCAGE+ NN CGVGV GA++GG+++
Sbjct: 60 NYDPEASYDFNDNDPDPTPRYDDD-NSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRM 118
Query: 240 LDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299
LDG+ TD++E+++L D +DIYS SWGP DDGK++DGPG L++ A++ G+ GR GKG
Sbjct: 119 LDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGPGPLAQRALENGVTNGRNGKG 178
Query: 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359
+FV+AAGNG GDNC DGY NSIYTI++++ +G YSE + ++A+A SGG
Sbjct: 179 SIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
Query: 360 DPV-KIITTDVHNTCTC--EHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTS 414
+P I+TTD+ C C H+GTSAAAP+AAGV+AL LEANPN+TWRD QHILA T+
Sbjct: 239 NPEASIVTTDLGGNCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTA 296
|
Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation. Length = 297 |
| >gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 2e-58
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 165 IIDDGMEYTHEDIK---DSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNN 221
++D G++ H D+ A Y+F D P +D N HGT AG + NN
Sbjct: 4 VLDTGIDVNHPDLSGRYIGLAYRNGYDFVDNDPD--PTPDDDNNGHGTHVAGIIAAGDNN 61
Query: 222 SKCGVGVCYGARVGGVKLLDGE-TTDLIESKALQFGL---DKVDIYSGSWGPPDDGKSMD 277
GVGV A++ VK+L G TD + A+++ + + + + S GP D
Sbjct: 62 GSGGVGVAPNAKLESVKVLPGSGGTDSELAGAIEWAAERPNDIRVINMSLGPVDG----- 116
Query: 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN--CAADGYINSIYTIAIASARE 335
P +AID G KG LFV AAGNG DN + N+I I + + E
Sbjct: 117 -PPSSWSSAIDELAVNGADNKGSLFVVAAGNGGDYADNNPVSDPASANNI--ITVGAVTE 173
Query: 336 DGQSPFYSEECT---GLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLA 392
+G +S G+ + G + D HSGTS AAP+ AG A
Sbjct: 174 NGTIADFSNYGGPVDGIKPDIVAPGGNILSSGPGGD--LGGYDSHSGTSMAAPLVAGAAA 231
Query: 393 LALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLV 449
L L ANP++T + +L T+ + S +G+GL+N K V
Sbjct: 232 LLLSANPSLTPETLRALLVTTATDLGSMGLD-----------RS-FGYGLLNLGKAV 276
|
Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567. Length = 277 |
| >gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 1e-31
Identities = 75/258 (29%), Positives = 105/258 (40%), Gaps = 22/258 (8%)
Query: 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPN 220
V + +ID G++ H D+ F + + + P D N HGT AG + N
Sbjct: 1 VTVAVIDTGVDPDHPDLDGLFGGGDG-GNDDDDNENGPTDPDDGNGHGTHVAGIIAASAN 59
Query: 221 NSKCGVGVCYGARVGGVKLLDGETTDLIES--KALQF--GLDKVDIYSGSWGPPDDGKSM 276
N GVGV GA++ VK+LDG+ + A+ + D+ + S G
Sbjct: 60 NGG-GVGVAPGAKLIPVKVLDGDGSGSSSDIAAAIDYAAADQGADVINLSLG-------- 110
Query: 277 DGPGKLSKAAIDRGIREGRQGKGVLFVFAAGN-GKYNGDNCAADGYINSIYTIAIASARE 335
GPG +A+ I GVL V AAGN G G N ++ + A R+
Sbjct: 111 -GPGSPPSSALSEAIDYALAKLGVLVVAAAGNDGPDGGTNIGYPAASPNVIAVG-AVDRD 168
Query: 336 DGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALAL 395
+ S G+ A G I + SGTS AAPI AGV AL L
Sbjct: 169 GTPASPSSNGGAGVDIAAPGGDILS-----SPTTGGGGYATLSGTSMAAPIVAGVAALLL 223
Query: 396 EANPNMTWRDCQHILAWT 413
ANP++T + L T
Sbjct: 224 SANPDLTPAQVKAALLST 241
|
Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 241 |
| >gnl|CDD|201820 pfam01483, P_proprotein, Proprotein convertase P-domain | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-29
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 501 LEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDP 560
LEHV ++NI H RRGD+RI LT+PSG +SVL+ RP+DD ++GFV+W+ +++ HWGE+
Sbjct: 1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRPRDDSRSGFVNWTFMSVHHWGENA 60
Query: 561 VGEWKFEIFDTKYDG 575
VG W E+ D G
Sbjct: 61 VGTWTLEVEDKNNPG 75
|
A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain. Length = 87 |
| >gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 1e-28
Identities = 78/261 (29%), Positives = 114/261 (43%), Gaps = 33/261 (12%)
Query: 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPN 220
V + IID G++ H D+ P+L +N + + HGT CAG N
Sbjct: 1 VVVAIIDTGVDLNHPDLSGK--PKLVPGWNFVSNNDPT---SDIDGHGTACAGVAAAVGN 55
Query: 221 NSKCGVGVCYGARVGGVKLLDGE--TTDLIESKALQFGLDK-VDIYSGSWGPPDDGKSMD 277
N GV GA++ V++ D ++A+ + D D+ S SWG D +S+
Sbjct: 56 NGLGVAGVAPGAKLMPVRIADSLGYAYWSDIAQAITWAADNGADVISNSWGGSDSTESI- 114
Query: 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDG 337
+AID GR GKG + +FAAGN + + GY + IA+A+ +
Sbjct: 115 ------SSAIDNAATYGRNGKGGVVLFAAGNSGRSVSS----GYAANPSVIAVAATDSND 164
Query: 338 QSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEH--------SGTSAAAPIAAG 389
YS + A GI TT ++ SGTS A+P+AAG
Sbjct: 165 ARASYSNYGNYVDLVAPGVGIW------TTGTGRGSAGDYPGGGYGSFSGTSFASPVAAG 218
Query: 390 VLALALEANPNMTWRDCQHIL 410
V AL L ANPN+T + + IL
Sbjct: 219 VAALILSANPNLTPAEVEDIL 239
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 242 |
| >gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 7e-24
Identities = 72/269 (26%), Positives = 104/269 (38%), Gaps = 55/269 (20%)
Query: 165 IIDDGMEYTHEDIKDSFAPELSYNFNAEKWD-------------------ITPRYEDPRN 205
+ID G++Y H D+KD+ + N + N
Sbjct: 8 VIDTGVDYNHPDLKDN----MWVNPGEIPGNGIDDDGNGYVDDIYGWNFVNNDNDPMDDN 63
Query: 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDK-V 260
HGT AG + NN GV + ++ +K L G T+D I KA+ + +D
Sbjct: 64 GHGTHVAGIIGAVGNNGIGIAGVAWNVKIMPLKFLGADGSGTTSDAI--KAIDYAVDMGA 121
Query: 261 DIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADG 320
I + SWG GP + + AI R I G+LFV AAGN N D
Sbjct: 122 KIINNSWGGG-------GPSQALRDAIARAI-----DAGILFVAAAGNDGTNNDKTPT-- 167
Query: 321 Y---INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCE 376
Y + I++A+ + +S G + ++ P V I++T
Sbjct: 168 YPASYDLDNIISVAATDSNDALASFS--NYG----KKTVDLAAPGVDILSTSP-GGGYGY 220
Query: 377 HSGTSAAAPIAAGVLALALEANPNMTWRD 405
SGTS A P AG AL L NPN+T
Sbjct: 221 MSGTSMATPHVAGAAALLLSLNPNLTAAQ 249
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 259 |
| >gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 65/273 (23%), Positives = 94/273 (34%), Gaps = 30/273 (10%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSY-NFNAEKWDITPRYEDPRNKHGTRCAGEL 215
GAGV + +ID G++ +H FA +S ++ D + HGT AG +
Sbjct: 1 TGAGVKVGVIDSGIDLSH----PEFAGRVSEASYYVAVNDAGYASNGDGDSHGTHVAGVI 56
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKAL------QFGLDKVDIYSGSWGP 269
+ GV A + + S A V I + SWG
Sbjct: 57 AAARDGGGMH-GVAPDATLYSARASAS--AGSTFSDADIAAAYDFLAASGVRIINNSWGG 113
Query: 270 PDDGKSMDGPGKLSKAAID---RGIREGRQGKGVLFVFAAGNGKY--NGDNCAADGYI-- 322
++ K S A G LFVFAAGN AA Y+
Sbjct: 114 NPAIDTVSTTYKGSAATQGNTLLAALARAANAGGLFVFAAGNDGQANPSLAAAALPYLEP 173
Query: 323 ---NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCEH- 377
IA+ + +G YS +A + ++ P I +TD
Sbjct: 174 ELEGGW--IAVVAVDPNGTIASYSYSNRCGVAANWC--LAAPGENIYSTDPDGGNGYGRV 229
Query: 378 SGTSAAAPIAAGVLALALEANPNMTWRDCQHIL 410
SGTS AAP +G AL + P +T + L
Sbjct: 230 SGTSFAAPHVSGAAALLAQKFPWLTADQVRQTL 262
|
Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface. Length = 267 |
| >gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 4e-17
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 41/260 (15%)
Query: 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKP 219
GV + +ID G++ +H D+K + NF + + Y+D N HGT AG +
Sbjct: 1 GVKVAVIDTGIDSSHPDLKLNIVG--GANFTGDDNND---YQD-GNGHGTHVAGIIAALD 54
Query: 220 NNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSWGPPDDGK 274
N VGV A + VK+L+ G +D+I +++ ++ +DI + S G P D
Sbjct: 55 NGVG-VVGVAPEADLYAVKVLNDDGSGTYSDII--AGIEWAIENGMDIINMSLGGPSDSP 111
Query: 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIY--TIAIAS 332
++ + AI + G+L V AAGN +G+ ++ Y Y IA+ +
Sbjct: 112 AL-------REAIKKAYA-----AGILVVAAAGN---SGNGDSSYDYPAK-YPSVIAVGA 155
Query: 333 AREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHSGTSAAAPIAAGVL 391
+ +S + A P V I++T +N SGTS A P AGV
Sbjct: 156 VDSNNNRASFSSTGPEVELAA-------PGVDILSTYPNNDYA-YLSGTSMATPHVAGVA 207
Query: 392 ALALEANPNMTWRDCQHILA 411
AL P +T + L
Sbjct: 208 ALVWSKRPELTNAQVRQALN 227
|
This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 229 |
| >gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 69/252 (27%), Positives = 101/252 (40%), Gaps = 40/252 (15%)
Query: 155 NINGAGVNIIIIDDGMEYTHED-IKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRC 211
G+GV + ++D G++ TH D +K F L Y+F D N HGT
Sbjct: 24 ITGGSGVTVAVVDTGVDPTHPDLLKVKFV--LGYDF-------VDNDSDAMDDNGHGTHV 74
Query: 212 AGELVMKPNNSKCGVGVCYGARVGGVKLLD--GETTDLIESKALQFGLDK-VDIYSGSWG 268
AG + NN GV A++ VK+LD G + + +++ DK + + S G
Sbjct: 75 AGIIAAATNNGTGVAGVAPKAKIMPVKVLDANGSGSLADIANGIRYAADKGAKVINLSLG 134
Query: 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSI-YT 327
G L A+ I KGV+ V AAGN + ++ Y +
Sbjct: 135 -----------GGLGSTALQEAINYAWN-KGVVVVAAAGN-----EGVSSVSYPAAYPGA 177
Query: 328 IAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIA 387
IA+A+ +D + +S + +A GGI D SGTS A P
Sbjct: 178 IAVAATDQDDKRASFSNYGKWVDVSAPGGGI--LSTTPDGDYAY-----MSGTSMATPHV 230
Query: 388 AGVLALALEANP 399
AGV AL P
Sbjct: 231 AGVAALLYSQGP 242
|
Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 260 |
| >gnl|CDD|227271 COG4935, COG4935, Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-16
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 489 TPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVK--SVLMEPRPQDDCKTGFV 546
S +V + +++ V ++I H RGD+RI L +PSG S L R DD G+
Sbjct: 25 ISSSFSVADANFIKDVTVRVDITHEYRGDLRITLISPSGQGILSNLTLGRRYDDDSQGYN 84
Query: 547 DWSILTLKHWGEDPVGEWKFEIFDT 571
D S + ++ WGE G W+ E+ D
Sbjct: 85 DQSFMLVQLWGERAEGNWRLEVQDL 109
|
Length = 177 |
| >gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 78.1 bits (191), Expect = 4e-15
Identities = 64/258 (24%), Positives = 97/258 (37%), Gaps = 16/258 (6%)
Query: 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGT 209
V + G GV + +ID G++ +H D+ S + D P + D HGT
Sbjct: 133 VANGAGLTGKGVTVAVIDTGVDASHPDLAGSAVA----GGDFVDGDPEPPFLDDNG-HGT 187
Query: 210 RCAGELVMKP-NNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWG 268
AG + +N GV GA++ VK+L S L + ++ + G
Sbjct: 188 HVAGTIAAVIFDNGAGVAGVAPGAKLLLVKVLGSGGG----SGELSDVAEGIEGAANLGG 243
Query: 269 PPDD-GKSMDGPGKLSK-AAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC--AADGYINS 324
P D S+ G S A+ + GV+ V AAGN N A +
Sbjct: 244 PADVINLSLGGSLSDSASPALGDALAAAANAGGVVIVAAAGNDGSNASGGDLAYPASYPA 303
Query: 325 IYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCE--HSGTSA 382
IA+ + +S + + + G++ + SGTS
Sbjct: 304 PNVIAVGALDLSDTVASFSNDGSPTGVDIAAPGVNILSLSAVNTLPGDGADYVTLSGTSM 363
Query: 383 AAPIAAGVLALALEANPN 400
AAP +GV AL L ANPN
Sbjct: 364 AAPHVSGVAALVLSANPN 381
|
Length = 508 |
| >gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 4e-15
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 54/278 (19%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELS----YNFNAEKWDI--TPRYEDP-------- 203
G GV + +ID G++YTH D+ P Y+F + +D T Y P
Sbjct: 1 GKGVKVAVIDTGIDYTHPDLGGPGFPNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAGD 60
Query: 204 RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIES--KALQFGL 257
HGT AG + N GV A + K+L G T +I + +A+ G+
Sbjct: 61 ATGHGTHVAGIIAGNGVNVGTIKGVAPKADLYAYKVLGPGGSGTTDVIIAAIEQAVDDGM 120
Query: 258 DKVDIYSGS-WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC 316
D +++ GS PDD AI+ ++ G V+ V AAGN
Sbjct: 121 DVINLSLGSSVNGPDD---------PDAIAINNAVKAG-----VVVVAAAGNSGPAPYTI 166
Query: 317 AADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-----------VKII 365
+ S T+ ++ + ++ + ++ G + V I+
Sbjct: 167 GSPATAPSAITVGASTVADVAEADT-------VGPSSSRGPPTSDSAIKPDIVAPGVDIM 219
Query: 366 TTDV-HNTCTCEHSGTSAAAPIAAGVLALALEANPNMT 402
+T T SGTS AAP AG AL +A+P+ +
Sbjct: 220 STAPGSGTGYARMSGTSMAAPHVAGAAALLKQAHPDWS 257
|
The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 295 |
| >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 66/293 (22%), Positives = 105/293 (35%), Gaps = 68/293 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKD-SFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGEL- 215
G G+ + ++D G++ H D N + T Y+D N HGT AG +
Sbjct: 1 GKGITVAVLDTGIDAPHPDFDGRIIRFADFVNTVNGR---TTPYDD--NGHGTHVAGIIA 55
Query: 216 --VMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIY------ 263
N GV GA + GVK+LD G +D+I + + ++ + Y
Sbjct: 56 GSGRASNGKYKGV--APGANLVGVKVLDDSGSGSESDII--AGIDWVVENNEKYNIRVVN 111
Query: 264 ---SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADG 320
P + A++R G ++ V AAGN + G
Sbjct: 112 LSLGAPPDPSYGEDPLC-------QAVERLWDAG-----IVVVVAAGNSGPGPGTITSPG 159
Query: 321 YINSIYTIAIASAREDGQSPFYSEECTGLIATAYSG------GISDP------VKII--- 365
NS I + + ++G + +S G P I+
Sbjct: 160 --NSPKVITVGAVDDNGPHDDG--------ISYFSSRGPTGDGRIKPDVVAPGENIVSCR 209
Query: 366 TTDVHNTCT-----CEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWT 413
+ + E SGTS A P +G +AL L+ANP +T + + IL T
Sbjct: 210 SPGGNPGAGVGSGYFEMSGTSMATPHVSGAIALLLQANPILTPDEVKCILRDT 262
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 264 |
| >gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 7e-13
Identities = 69/267 (25%), Positives = 99/267 (37%), Gaps = 40/267 (14%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPE------LSYNFNAEKWDITPRYEDPRNKHGTRC 211
G G+ + ++D G++ TH D++ + + YNF DI HGT
Sbjct: 9 GPGIIVAVVDTGVDGTHPDLQGNGDGDGYDPAVNGYNFVPNVGDI-DNDVSVGGGHGTHV 67
Query: 212 AGELVMKPNNSKCGVGVCYGARVG----GVKLL-------DGETTDLIESKALQFGLDK- 259
AG + NN G GV A G GVK++ D + A+ + D
Sbjct: 68 AGTIAAVNNN---GGGVGGIAGAGGVAPGVKIMSIQIFAGRYYVGDDAVAAAIVYAADNG 124
Query: 260 VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQG--KGVLFVFAAGNGKYNGDNCA 317
I SWG G L K A D I G + VF+AGN +
Sbjct: 125 AVILQNSWG----GTGGGIYSPLLKDAFDYFIENAGGSPLDGGIVVFSAGN------SYT 174
Query: 318 ADGYINSIY--TIAIASAREDGQSPFYSEECTGLIATAYSGG--ISDPVKIITTDVHNTC 373
+ + Y IA+A+ + +S + A G +S K+ N
Sbjct: 175 DEHRFPAAYPGVIAVAALDTNDNKASFSNYGRWVDIAAPGVGTILSTVPKLDGDGGGNYE 234
Query: 374 TCEHSGTSAAAPIAAGVLALALEANPN 400
SGTS AAP +GV AL L P+
Sbjct: 235 Y--LSGTSMAAPHVSGVAALVLSKFPD 259
|
Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 273 |
| >gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
Score = 67.5 bits (166), Expect = 2e-12
Identities = 74/288 (25%), Positives = 109/288 (37%), Gaps = 71/288 (24%)
Query: 135 RLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFA--PELSYNFNAE 192
R+S LD Y + G+GV++ ++D G+ TH + F +F
Sbjct: 5 RISQRDLPLD----GTYYYDSSTGSGVDVYVLDTGIRTTHVE----FGGRAIWGADFVGG 56
Query: 193 KWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLI 248
D D N HGT AG V K GV A + VK+LD G + +I
Sbjct: 57 DPD-----SDC-NGHGTHVAG-TVG----GK-TYGVAKKANLVAVKVLDCNGSGTLSGII 104
Query: 249 ESKALQFGLDKV--DIYSG--------SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298
GL+ V D S G ++D AA+ +
Sbjct: 105 A------GLEWVANDATKRGKPAVANMSLGGGAS-TALD-------AAVAAAVN-----A 145
Query: 299 GVLFVFAAGNGKYNGDNCA---ADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYS 355
GV+ V AAGN N D C A ++ I + + D +S G ++
Sbjct: 146 GVVVVVAAGN--SNQDACNYSPA----SAPEAITVGATDSDDARASFS--NYGSCVDIFA 197
Query: 356 GGISDPVKIITTDV-HNTCTCEHSGTSAAAPIAAGVLALALEANPNMT 402
G V I++ + +T T SGTS AAP AG+ A L P+++
Sbjct: 198 PG----VDILSAWIGSDTATATLSGTSMAAPHVAGLAAYLLSLGPDLS 241
|
The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K. Length = 255 |
| >gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 3e-11
Identities = 85/321 (26%), Positives = 123/321 (38%), Gaps = 56/321 (17%)
Query: 152 QELNINGAGVNIIIIDDGMEYTHEDIKDSFAP----ELSYNFNAEKWDIT----PRYEDP 203
I G GV + ++D G++YTH + F P Y+F + +D T P +DP
Sbjct: 6 HAEGITGKGVKVAVVDTGIDYTHPALGGCFGPGCKVAGGYDFVGDDYDGTNPPVPD-DDP 64
Query: 204 --RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD--GETTDLIESKALQFGL-D 258
HGT AG + PN GV A +G ++ G TT+ A D
Sbjct: 65 MDCQGHGTHVAGIIAANPNAYGF-TGVAPEATLGAYRVFGCSGSTTEDTIIAAFLRAYED 123
Query: 259 KVDIYSGSWGPPDDGKSMDGPGKLSKAA----IDRGIREGRQGKGVLFVFAAGNGKYNGD 314
D+ + S G GP S+ R I + GV+ AAGN G
Sbjct: 124 GADVITASLG---------GPSGWSEDPWAVVASR-IVD----AGVVVTIAAGNDGERGP 169
Query: 315 NCAADGYINSIYTIAIASAREDGQSPFYS----EECTGLIATAYSGGISDPVKIITTDVH 370
A+ + IA+AS S F S E A GG I++T
Sbjct: 170 FYASSP-ASGRGVIAVASV----DSYFSSWGPTNELYLKPDVAAPGG-----NILSTYPL 219
Query: 371 NTCTCE-HSGTSAAAPIAAGVLALALEA-NPNMTWRDCQHILAWTSEREPLSHVSGWERN 428
SGTS A P AG AL ++A + ++ + + +LA T+ +PL G
Sbjct: 220 AGGGYAVLSGTSMATPYVAGAAALLIQARHGKLSPAELRDLLASTA--KPLPWSDG---T 274
Query: 429 ARDLWFHSAY--GFGLINTFK 447
+ G GL+N +K
Sbjct: 275 SALPDLAPVAQQGAGLVNAYK 295
|
gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 312 |
| >gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 8e-11
Identities = 71/271 (26%), Positives = 104/271 (38%), Gaps = 54/271 (19%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAE-----KWDITPRYEDPRNKHGTRCA 212
G G+ + ID G+++TH +K+ + + + + TP D N HGT
Sbjct: 1 GTGIVVANIDTGVDWTHPALKNKYRGWGGGSADHDYNWFDPVGNTPLPYDD-NGHGTHTM 59
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD---GETTDLIESKALQFGL------------ 257
G +V + +GV GAR + LD G D + Q+ L
Sbjct: 60 GTMVGN-DGDGQQIGVAPGARWIACRALDRNGGNDADYLR--CAQWMLAPTDSAGNPADP 116
Query: 258 DKV-DIYSGSWG-PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN 315
D D+ + SWG P D + + +AA G+ VFAAGN +G
Sbjct: 117 DLAPDVINNSWGGPSGDNEWLQPAVAAWRAA------------GIFPVFAAGN---DGPR 161
Query: 316 CAADGYINSIY--TIAIASAREDGQ-SPFYSEECTGLIATAYSGGI----SDPVKIITTD 368
C+ + Y + A+ + + + F S + G I S P I +
Sbjct: 162 CSTLNAPPANYPESFAVGATDRNDVLADFSS------RGPSTYGRIKPDISAPGVNIRSA 215
Query: 369 VHNTCTCEHSGTSAAAPIAAGVLALALEANP 399
V SGTS AAP AGV AL ANP
Sbjct: 216 VPGGGYGSSSGTSMAAPHVAGVAALLWSANP 246
|
Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Length = 264 |
| >gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 69/294 (23%), Positives = 96/294 (32%), Gaps = 82/294 (27%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKD------SFAPELSYNFNAEKWDITPRYEDPRNKHGTR 210
GAGV + ++D G++ TH SF + HGT
Sbjct: 6 TGAGVRVAVLDTGIDLTHPAFAGRDITTKSFVGGED--------------VQDGHGHGTH 51
Query: 211 CAGELVMKPNNSKCG-------VGVCYGAR--VGGVKLLDGETTDLIESKALQFGLDK-V 260
CAG + G GV GA + G L DG D +Q+ +
Sbjct: 52 CAGTI--------FGRDVPGPRYGVARGAEIALIGKVLGDGGGGDGGILAGIQWAVANGA 103
Query: 261 DIYSGSWG-----------PPDDGKSMD-----GPGKLSKAAIDRGIREGRQGKGVLFVF 304
D+ S S G PP S +L A + + +G L V
Sbjct: 104 DVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALMTLVAAQAALARGTLIVA 163
Query: 305 AAGN---------GKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYS 355
AAGN N C + + +A+ G++ +S +S
Sbjct: 164 AAGNESQRPAGIPPVGNPAACPS--------AMGVAAVGALGRTGNFSA------VANFS 209
Query: 356 GG---ISDP-VKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRD 405
G I+ P V I++ SGTS A P AGV AL EA P R
Sbjct: 210 NGEVDIAAPGVDIVSAAP-GGGYRSMSGTSMATPHVAGVAALWAEALPKAGGRA 262
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 297 |
| >gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 64/279 (22%), Positives = 95/279 (34%), Gaps = 48/279 (17%)
Query: 154 LNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEK---WDITPRYEDPRNKHGTR 210
L + G G + + D G++ H D N K +D +D + HGT
Sbjct: 2 LGLTGKGQIVGVADTGLDTNHCFFYDPNFN--KTNLFHRKIVRYDSLSDTKDDVDGHGTH 59
Query: 211 CAGELVMKPNNSKCGV---GVCYGARVGGVKLLDGETT-------DLIESKALQFGLDKV 260
AG + K N+S GV A++ + D + + S G
Sbjct: 60 VAGIIAGKGNDSSSISLYKGVAPKAKLYFQDIGDTSGNLSSPPDLNKLFSPMYDAG---A 116
Query: 261 DIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC---- 316
I S SWG P + A D+ +LFVF+AGN +G N
Sbjct: 117 RISSNSWGSPVNNGYTL-----LARAYDQFAYNNPD---ILFVFSAGNDGNDGSNTIGSP 168
Query: 317 ----------AADGY-INSIYTIAIASAREDGQSPFYSEECT--GLIA---TAYSGGI-- 358
A++ +++ S D + F S T G I A GI
Sbjct: 169 ATAKNVLTVGASNNPSVSNGEGGLGQSDNSDTVASFSSRGPTYDGRIKPDLVAPGTGILS 228
Query: 359 SDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA 397
+ D ++ SGTS A P+ AG AL +
Sbjct: 229 ARSGGGGIGDTSDSAYTSKSGTSMATPLVAGAAALLRQY 267
|
Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases. Length = 293 |
| >gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 5e-09
Identities = 59/272 (21%), Positives = 97/272 (35%), Gaps = 36/272 (13%)
Query: 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKP 219
GV + ++D G++ H D+ +F+ + D HGT +G +
Sbjct: 1 GVTVAVLDTGVDADHPDLAG--RVAQWADFDENRRISATEVFD-AGGHGTHVSGTIGGGG 57
Query: 220 NNSKCGVGVCYGARVGGVKLLDGE---TTDLIESK--ALQFGLDKVDIYSGSWGPPDDGK 274
+GV A + K+LD + +I A++ D V + G +D
Sbjct: 58 AKGV-YIGVAPEADLLHGKVLDDGGGSLSQIIAGMEWAVEKDADVVSMSLGGTYYSED-P 115
Query: 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTI-AIASA 333
+ LS G LFV +AGN + G + ++ A+
Sbjct: 116 LEEAVEALSNQT------------GALFVVSAGNE--GHGTSGSPGSAYAALSVGAVDRD 161
Query: 334 REDGQ--SPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCEH--------SGTSA 382
ED S S + + P V DV++ + SGTS
Sbjct: 162 DEDAWFSSFGSSGASLVSAPDSPPDEYTKPDVAAPGVDVYSARQGANGDGQYTRLSGTSM 221
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTS 414
AAP AGV AL A+P+++ + L T+
Sbjct: 222 AAPHVAGVAALLAAAHPDLSPEQIKDALTETA 253
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 254 |
| >gnl|CDD|173819 cd07494, Peptidases_S8_10, Peptidase S8 family domain, uncharacterized subfamily 10 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 2e-08
Identities = 79/332 (23%), Positives = 122/332 (36%), Gaps = 79/332 (23%)
Query: 145 LNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDP- 203
LN V+Q I G GV + ++D G Y H S + + + P DP
Sbjct: 8 LNATRVHQR-GITGRGVRVAMVDTGF-YAHP-------FFESRGY-QVRVVLAPGATDPA 57
Query: 204 --RNKHGT-RCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKV 260
N HGT A + P GA+ GVKL + + + A + +
Sbjct: 58 CDENGHGTGESANLFAIAP-----------GAQFIGVKLGGPDLVNSVG--AFKKAISLS 104
Query: 261 -DIYSGSWG------PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYN- 312
DI S SWG +S+ K A + + +G++ VF+AGNG ++
Sbjct: 105 PDIISNSWGYDLRSPGTSWSRSLPNALKALAATLQDAVA-----RGIVVVFSAGNGGWSF 159
Query: 313 ----GDNCAADG-YINSIYTIAIASAREDGQSPFYSE----ECTGLIATAYSGG-ISDPV 362
+ AA G +++ +S +S Y + GL+ + PV
Sbjct: 160 PAQHPEVIAAGGVFVDEDGARRASSYASGFRSKIYPGRQVPDVCGLVGMLPHAAYLMLPV 219
Query: 363 KIITTDVHNTCTCEHSGT------------SAAAPIAAGVLALALEANPNMTWRDCQHIL 410
+ + +C GT SAAAP AGV AL L+ANP ++ + +L
Sbjct: 220 P-PGSQLDRSCAAFPDGTPPNDGWGVFSGTSAAAPQVAGVCALMLQANPGLSPERARSLL 278
Query: 411 AWTSEREPLSHVSGWERNARDLWF-HSAYGFG 441
+ ARD+ SA G
Sbjct: 279 ---------------NKTARDVTKGASAQGTS 295
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 298 |
| >gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 299 GVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIA---TAYS 355
GVL+ +AGN +G + + G+ + IA+ + F S+ G
Sbjct: 123 GVLYFSSAGN---DGQSGSIFGHAAAPGAIAVGAVDYGNTPAFGSDPAPGGTPSSFDPVG 179
Query: 356 GGISDPVKIITTD------VHNTCT------CEHSGTSAAAPIAAGVLALALEANPNMTW 403
+ P D V+ T GTSAAAP AAGV AL L ANP +T
Sbjct: 180 IRLPTPEVRQKPDVTAPDGVNGTVDGDGDGPPNFFGTSAAAPHAAGVAALVLSANPGLTP 239
Query: 404 RDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLV 449
D + L T+ G++ A G GL++ + V
Sbjct: 240 ADIRDALRSTALD---MGEPGYDN---------ASGSGLVDADRAV 273
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase. Length = 275 |
| >gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 64/215 (29%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 207 HGTRCAGELVMKPNNSKCGV-GVCYGARVGGVKLL---DGETTDLIESKALQFGLDKVDI 262
HGT AG + NN GV GV +GAR+ V++L G +D+++ GL +
Sbjct: 73 HGTHVAGTIAAVTNNGV-GVAGVAWGARILPVRVLGKCGGTLSDIVDGMRWAAGLPVPGV 131
Query: 263 YSGSWGPPDDGK----SMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDN 315
P+ K S+ G G S AI+ +GVL V AAGN G +
Sbjct: 132 PV----NPNPAKVINLSLGGDGACSATMQNAINDVR-----ARGVLVVVAAGN---EGSS 179
Query: 316 CAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGI-------SDPVKIITTD 368
+ D N IA+ + GQ YS + +A G P T
Sbjct: 180 ASVDAPANCRGVIAVGATDLRGQRASYSNYGPAVDVSAPGGDCASDVNGDGYPDSNTGTT 239
Query: 369 VHNTCTCEH-SGTSAAAPIAAGVLALALEANPNMT 402
T GTS AAP AGV AL NP++T
Sbjct: 240 SPGGSTYGFLQGTSMAAPHVAGVAALMKSVNPSLT 274
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 285 |
| >gnl|CDD|173792 cd04843, Peptidases_S8_11, Peptidase S8 family domain, uncharacterized subfamily 11 | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 60/258 (23%), Positives = 94/258 (36%), Gaps = 40/258 (15%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216
+G GV + I+ G HED+ + +S + + HGT G +V
Sbjct: 14 SGQGVTFVDIEQGWNLNHEDLVGNGITLISG----------LTDQADSD-HGTAVLGIIV 62
Query: 217 MKPNNSKCGVGVCYGARVGGVKLLDGETT-DLIESKALQFGLDKVDIYSGSWGPPDDGKS 275
K +N G+ +GA+ V T D I A V + G P++G
Sbjct: 63 AK-DNGIGVTGIAHGAQAAVVSSTRVSNTADAILDAADYLSPGDVILLEMQTGGPNNGYP 121
Query: 276 MDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYINSIYT------- 327
P + +A D IR G++ V AAGNG + D + G I + ++
Sbjct: 122 PL-PVEYEQANFDA-IRTATD-LGIIVVEAAGNGGQDLDAPVYNRGPILNRFSPDFRDSG 178
Query: 328 --IAIASAREDGQSPFYSE------ECTGL---IATAYSGGISDPVKIITTDVHNTCTCE 376
+ A + G + + G + T G + D + T
Sbjct: 179 AIMVGAGSSTTGHTRLAFSNYGSRVDVYGWGENVTTTGYGDLQDL-----GGENQDYTDS 233
Query: 377 HSGTSAAAPIAAGVLALA 394
SGTS+A+PI AG A
Sbjct: 234 FSGTSSASPIVAGAAASI 251
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 277 |
| >gnl|CDD|173817 cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 46/257 (17%)
Query: 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMK- 218
GV + +ID G++ H D+ + A + + E ++ D ++ HGT CAG ++K
Sbjct: 1 GVRVAVIDSGVDTDHPDLGNL-ALDGEVTIDLEIIVVSAEGGD-KDGHGTACAG--IIKK 56
Query: 219 --PNNSKCGVGVCYGARVGGVKLL--DGETTDLIESKALQFGLDK-VDIYSGSWGPPDDG 273
P A +G +K+L DG + KAL+ ++ + I + S G P D
Sbjct: 57 YAPE-----------AEIGSIKILGEDGRCNSFVLEKALRACVENDIRIVNLSLGGPGD- 104
Query: 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASA 333
+ + + E G + V AA N G A ++ I + S
Sbjct: 105 ---------RDFPLLKELLEYAYKAGGIIVAAAPNNNDIG-TPPAS--FPNV--IGVKSD 150
Query: 334 REDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLAL 393
D F+ S I + SG S AAP G++AL
Sbjct: 151 TADDPKSFWY----------IYVEFSADGVDIIAPAPHGRYLTVSGNSFAAPHVTGMVAL 200
Query: 394 ALEANPNMTWRDCQHIL 410
L P++ D + +L
Sbjct: 201 LLSEKPDIDANDLKRLL 217
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 222 |
| >gnl|CDD|173816 cd07491, Peptidases_S8_7, Peptidase S8 family domain, uncharacterized subfamily 7 | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 65/292 (22%), Positives = 104/292 (35%), Gaps = 89/292 (30%)
Query: 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK----------HGTR 210
+ + +IDDG++ D++ S+ YE NK HGT
Sbjct: 5 IKVALIDDGVDILDSDLQGKIIGGKSF----------SPYEGDGNKVSPYYVSADGHGTA 54
Query: 211 CAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTD-LIES-------KALQFGLDK-VD 261
A ++ + +C A++ +KL D + D S KA++ ++K VD
Sbjct: 55 MA-RMICR---------ICPSAKLYVIKLEDRPSPDSNKRSITPQSAAKAIEAAVEKKVD 104
Query: 262 IYSGSWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDN--- 315
I S SW + + +L A A+DRGI +LF A+ G + GD
Sbjct: 105 IISMSWTIKKPEDNDNDINELENAIKEALDRGI--------LLFCSASDQGAFTGDTYPP 156
Query: 316 CAADGYINSIYTIAIASAREDGQSPFYSEECTGL--------IATAYSGGISDPVKIITT 367
AA I I +A EDG + + + + +S+
Sbjct: 157 PAARDRI-----FRIGAADEDGGADAPVGDEDRVDYILPGENVEARDRPPLSNSFV---- 207
Query: 368 DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQ--HILAWTSERE 417
H+G+S A +AAG+ AL L C + E E
Sbjct: 208 --------THTGSSVATALAAGLAALILY---------CVRLRAIGAEEENE 242
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 247 |
| >gnl|CDD|240338 PTZ00262, PTZ00262, subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 71/318 (22%), Positives = 125/318 (39%), Gaps = 53/318 (16%)
Query: 130 YEQDYRLSNSSKKLDLNIVPVYQELNING--AGVNIIIIDDGMEYTHEDIKDS------- 180
Y+ + N LDL + QEL NI +ID G++Y H D+ D+
Sbjct: 285 YQFNDEGRNLQWGLDLTRLDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVNVKE 344
Query: 181 ------FAPELSYNFNAEK-WDITPRYEDP--RNKHGTRCAGELVMKPNNSKCGVGVCYG 231
+ + N + E + P N HGT +G + NN+ VGV
Sbjct: 345 LHGRKGIDDDNNGNVDDEYGANFVNNDGGPMDDNYHGTHVSGIISAIGNNNIGIVGVDKR 404
Query: 232 ARVGGVKLLD----GETTDLIESKALQFGLDK-VDIYSGSWGPPDDGKSMDGPGKLSKAA 286
+++ K LD G D+ K + + + + +GS+ S D + +
Sbjct: 405 SKLIICKALDSHKLGRLGDMF--KCFDYCISREAHMINGSF-------SFDEYSGIFNES 455
Query: 287 IDRGIREGRQGKGVLFVFAAGNGKYNGDNCAA----DGYINSIY----------TIAIAS 332
+ + KG+LFV +A N + ++ D +N +Y I +++
Sbjct: 456 VKY-----LEEKGILFVVSASNCSHTKESKPDIPKCDLDVNKVYPPILSKKLRNVITVSN 510
Query: 333 AREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLA 392
+D + YS + Y + I +T N+ + +GTS AAP A + +
Sbjct: 511 LIKDKNNQ-YSLSPNSFYSAKYCQLAAPGTNIYSTFPKNSYR-KLNGTSMAAPHVAAIAS 568
Query: 393 LALEANPNMTWRDCQHIL 410
L L NP++++ + IL
Sbjct: 569 LILSINPSLSYEEVIRIL 586
|
Length = 639 |
| >gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 67/304 (22%), Positives = 108/304 (35%), Gaps = 55/304 (18%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
GAGV + +ID G++ H + P + + + D + HGT AG +
Sbjct: 12 GAGVTVAVIDTGVD-DHPRLPGLVLPGGDFVGSGDG-------TDDCDGHGTLVAGIIAG 63
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD------------GETTDLIES--KALQFGLDKVDIY 263
+P GV AR+ ++ G+ L ++ +A G D ++I
Sbjct: 64 RPGEGDGFSGVAPDARILPIRQTSAAFEPDEGTSGVGDLGTLAKAIRRAADLGADVINIS 123
Query: 264 SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY-I 322
+ P G G AA+ + KGV+ V AAGN +G Y
Sbjct: 124 LVACLPAGSGADDPELG----AAVRYAL-----DKGVVVVAAAGNTGGDG-QKTTVVYPA 173
Query: 323 NSIYTIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380
+A+ S DG +S L A I++ SGT
Sbjct: 174 WYPGVLAVGSIDRDGTPSSFSLPGPWVDLAAPG--------ENIVSLSPGGDGLATTSGT 225
Query: 381 SAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGF 440
S AAP +G AL P++T + + T++ R RD G+
Sbjct: 226 SFAAPFVSGTAALVRSRFPDLTAAQVRRRIEATADHPA--------RGGRD----DYVGY 273
Query: 441 GLIN 444
G+++
Sbjct: 274 GVVD 277
|
Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]. Length = 350 |
| >gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 69/324 (21%), Positives = 106/324 (32%), Gaps = 94/324 (29%)
Query: 149 PVYQELNINGAGVNIIIIDDGMEYTHED--IKDSFAPELSYNFNAEKWDITPRYEDPRNK 206
P++ + G G+ + +ID G++ TH+ + D + S F A+K Y N+
Sbjct: 1 PLWDKGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAGIGYGKYYNE 60
Query: 207 -----------------------HGTRCAGELV--MKPNNSKCGV-GVCYGA-----RVG 235
HG AG + ++ G+ GV A +V
Sbjct: 61 KVPFAYNYADNNDDILDEDDGSSHGMHVAGIVAGNGDEEDNGEGIKGVAPEAQLLAMKVF 120
Query: 236 GVKLLDGETTDLIESKALQFGLDKV----DIYSGSWGPPDDGKSMDGPGKLSKAAIDRGI 291
D +KA++ D V D+ + S G + AI R
Sbjct: 121 SNPEGGSTYDDAY-AKAIE---DAVKLGADVINMSLGSTAG---FVDLDDPEQQAIKRA- 172
Query: 292 REGRQGKGVLFVFAAGN----GKYNGDNCAADGYINSIY--------TIAIASARE---- 335
+ GV+ V AAGN G A + + +ASA +
Sbjct: 173 ----REAGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDVLTVASANKKVPN 228
Query: 336 --DGQSPFYSEECTGLIATAYSGG----------ISDP-VKIITTDVHNTCTCEHSGTSA 382
GQ +S S G I+ P I +T NT SGTS
Sbjct: 229 PNGGQMSGFS-----------SWGPTPDLDLKPDITAPGGNIYSTVNDNTYGYM-SGTSM 276
Query: 383 AAPIAAGVLALALEA----NPNMT 402
A+P AG AL + P ++
Sbjct: 277 ASPHVAGASALVKQRLKEKYPKLS 300
|
Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 346 |
| >gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 57/289 (19%), Positives = 103/289 (35%), Gaps = 59/289 (20%)
Query: 161 VNIIIIDDGMEYTHEDIKDSFAP-----ELSYNFNAEKWDIT--PRYEDPRNKHGTRCAG 213
V + +ID G++ H D+K+S + ++ ++ T + HGT AG
Sbjct: 2 VTVAVIDSGIDPDHPDLKNSISSYSKNLVPKGGYDGKEAGETGDINDIVDKLGHGTAVAG 61
Query: 214 ELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIES--KALQFGLDKVDIYSGSW 267
++ N GV G + ++ E++ +I++ A G+D +++ G +
Sbjct: 62 QIAANGNIK----GVAPGIGIVSYRVFGSCGSAESSWIIKAIIDAADDGVDVINLSLGGY 117
Query: 268 GPPDDGKSMDGPG-KLSKAAIDRGIREGRQGKGVLFVFAAGN------------------ 308
D K AI+ + KG + V AAGN
Sbjct: 118 LIIGGEYEDDDVEYNAYKKAINYA-----KSKGSIVVAAAGNDGLDVSNKQELLDFLSSG 172
Query: 309 --GKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIIT 366
NG+ + ++ T++ A+ S F + + + A G +
Sbjct: 173 DDFSVNGEVYDVPASLPNVITVS-ATDNNGNLSSFSNYGNSRIDLAAPGGDFLLLDQYGK 231
Query: 367 TD-VHNTCTCEHS--------------GTSAAAPIAAGVLALALEANPN 400
V+N + GTS AAP +G LAL ++ NP
Sbjct: 232 EKWVNNGLMTKEQILTTAPEGGYAYMYGTSLAAPKVSGALALIIDKNPL 280
|
Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 294 |
| >gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 22/126 (17%)
Query: 298 KGVLFVFAAGNGKYNGDNCA--------ADGYINSIYTIAIASAREDGQ---SPF--YSE 344
KGVL V AAGN + D G + + AS+++ + F Y +
Sbjct: 170 KGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSKKYENNLVANFSNYGK 229
Query: 345 ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWR 404
+ + A +I +T N SGTS AAP+ +GV AL PN+T +
Sbjct: 230 KNVDVFAPG--------ERIYSTTPDNEYE-TDSGTSMAAPVVSGVAALIWSYYPNLTAK 280
Query: 405 DCQHIL 410
+ + I+
Sbjct: 281 EVKQII 286
|
Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin.. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 291 |
| >gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 63/261 (24%), Positives = 83/261 (31%), Gaps = 71/261 (27%)
Query: 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPN 220
V + +ID G++ H P LS A + P P HGT A L
Sbjct: 1 VRVGMIDTGIDTAH--------PALSAVVIARLFFAGPGAPAPSA-HGTAVASLLA---- 47
Query: 221 NSKCGVGVCYGARVGGVKLL------DGETTDLIESKALQFGLD-----KVDIYSGSWGP 269
G G + G L + + AL LD V + + S
Sbjct: 48 ----GAGAQRPGLLPGADLYGADVFGRAGGGEGASALALARALDWLAEQGVRVVNISLAG 103
Query: 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIA 329
P + L AA+ +G++ V AAGN D AA + Y
Sbjct: 104 PPN--------ALLAAAVAAAAA-----RGMVLVAAAGN-----DGPAAPPLYPAAYPGV 145
Query: 330 IASAREDGQSPFYSEECTGL----------IATAYSGGISDPVKIITTDVHNTCTCEHSG 379
IA D + Y E G + A GG V SG
Sbjct: 146 IAVTAVDARGRLYREANRGAHVDFAAPGVDVWVAAPGGGYRYV---------------SG 190
Query: 380 TSAAAPIAAGVLALALEANPN 400
TS AAP LAL L+A+P
Sbjct: 191 TSFAAPFVTAALALLLQASPL 211
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 239 |
| >gnl|CDD|173813 cd07488, Peptidases_S8_2, Peptidase S8 family domain, uncharacterized subfamily 2 | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 298 KGVLFVFAAGN-GKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSG 356
V+ VF+AGN GK + +I + S +G F S+ G
Sbjct: 122 YEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVGSTDRNGDRFFASDVSNAGSEINSYG 181
Query: 357 G----ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNM 401
I P + SGTS +AP+ G++AL LE
Sbjct: 182 RRKVLIVAPGSNYNLP--DGKDDFVSGTSFSAPLVTGIIALLLEFYDRQ 228
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 247 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 586 | |||
| KOG3526|consensus | 629 | 100.0 | ||
| cd04059 | 297 | Peptidases_S8_Protein_convertases_Kexins_Furin-lik | 100.0 | |
| PTZ00262 | 639 | subtilisin-like protease; Provisional | 100.0 | |
| KOG3525|consensus | 431 | 100.0 | ||
| cd07484 | 260 | Peptidases_S8_Thermitase_like Peptidase S8 family | 100.0 | |
| cd07489 | 312 | Peptidases_S8_5 Peptidase S8 family domain, unchar | 100.0 | |
| cd05562 | 275 | Peptidases_S53_like Peptidase domain in the S53 fa | 100.0 | |
| cd07479 | 255 | Peptidases_S8_SKI-1_like Peptidase S8 family domai | 100.0 | |
| cd07475 | 346 | Peptidases_S8_C5a_Peptidase Peptidase S8 family do | 100.0 | |
| cd05561 | 239 | Peptidases_S8_4 Peptidase S8 family domain, unchar | 100.0 | |
| cd07497 | 311 | Peptidases_S8_14 Peptidase S8 family domain, uncha | 100.0 | |
| cd07483 | 291 | Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa | 100.0 | |
| cd04843 | 277 | Peptidases_S8_11 Peptidase S8 family domain, uncha | 100.0 | |
| cd04077 | 255 | Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 | 100.0 | |
| cd07476 | 267 | Peptidases_S8_thiazoline_oxidase_subtilisin-like_p | 100.0 | |
| cd07474 | 295 | Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam | 100.0 | |
| cd07481 | 264 | Peptidases_S8_BacillopeptidaseF-like Peptidase S8 | 100.0 | |
| cd07493 | 261 | Peptidases_S8_9 Peptidase S8 family domain, unchar | 100.0 | |
| cd07485 | 273 | Peptidases_S8_Fervidolysin_like Peptidase S8 famil | 100.0 | |
| cd07498 | 242 | Peptidases_S8_15 Peptidase S8 family domain, uncha | 100.0 | |
| cd07496 | 285 | Peptidases_S8_13 Peptidase S8 family domain, uncha | 100.0 | |
| cd07487 | 264 | Peptidases_S8_1 Peptidase S8 family domain, unchar | 100.0 | |
| KOG1153|consensus | 501 | 100.0 | ||
| cd07490 | 254 | Peptidases_S8_6 Peptidase S8 family domain, unchar | 100.0 | |
| cd07473 | 259 | Peptidases_S8_Subtilisin_like Peptidase S8 family | 100.0 | |
| cd07494 | 298 | Peptidases_S8_10 Peptidase S8 family domain, uncha | 100.0 | |
| cd07477 | 229 | Peptidases_S8_Subtilisin_subset Peptidase S8 famil | 100.0 | |
| cd04852 | 307 | Peptidases_S8_3 Peptidase S8 family domain, unchar | 100.0 | |
| cd04847 | 291 | Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil | 100.0 | |
| cd04842 | 293 | Peptidases_S8_Kp43_protease Peptidase S8 family do | 100.0 | |
| cd07491 | 247 | Peptidases_S8_7 Peptidase S8 family domain, unchar | 100.0 | |
| cd07480 | 297 | Peptidases_S8_12 Peptidase S8 family domain, uncha | 100.0 | |
| cd07478 | 455 | Peptidases_S8_CspA-like Peptidase S8 family domain | 100.0 | |
| cd04857 | 412 | Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid | 100.0 | |
| cd04848 | 267 | Peptidases_S8_Autotransporter_serine_protease_like | 100.0 | |
| cd07482 | 294 | Peptidases_S8_Lantibiotic_specific_protease Peptid | 100.0 | |
| PF00082 | 282 | Peptidase_S8: Subtilase family This is family S8 i | 100.0 | |
| cd07492 | 222 | Peptidases_S8_8 Peptidase S8 family domain, unchar | 100.0 | |
| KOG4266|consensus | 1033 | 100.0 | ||
| cd00306 | 241 | Peptidases_S8_S53 Peptidase domain in the S8 and S | 99.98 | |
| cd07488 | 247 | Peptidases_S8_2 Peptidase S8 family domain, unchar | 99.97 | |
| KOG1114|consensus | 1304 | 99.94 | ||
| COG1404 | 508 | AprE Subtilisin-like serine proteases [Posttransla | 99.91 | |
| cd04056 | 361 | Peptidases_S53 Peptidase domain in the S53 family. | 99.77 | |
| PF01483 | 87 | P_proprotein: Proprotein convertase P-domain; Inte | 99.73 | |
| COG4935 | 177 | Regulatory P domain of the subtilisin-like proprot | 99.59 | |
| COG4934 | 1174 | Predicted protease [Posttranslational modification | 98.93 | |
| PF05922 | 82 | Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP | 97.07 | |
| PF09315 | 179 | DUF1973: Domain of unknown function (DUF1973); Int | 85.79 |
| >KOG3526|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-91 Score=681.25 Aligned_cols=552 Identities=39% Similarity=0.689 Sum_probs=512.1
Q ss_pred cccceeeeeEEEEEcCC--cchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecc
Q psy5372 6 ERAEHFLNQWVVHISGD--PDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQF 83 (586)
Q Consensus 6 ~~~~~~~~~~iV~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~ 83 (586)
+..+++++.|+|+|+.| .+.+.++|+++|+.+.+++...++.|+|.++.+.+...+.+....++|.++|.|.-++++.
T Consensus 25 ~~~~vftnhflv~l~~g~g~~~ah~va~~hgf~nrg~~~a~d~eyhf~h~~l~har~rrsl~h~~~l~~dp~v~~a~qq~ 104 (629)
T KOG3526|consen 25 EAVDVFTNHFLVHLKEGGGLEDAHRVAKRHGFINRGQVAASDNEYHFVHPALVHARTRRSLGHHAKLHNDPEVKMALQQE 104 (629)
T ss_pred cCcceeeeeEEEEEeccCChHHHHHHHHHhCccccccccccCceeeeeccccchhhhhcccchhhhhccChhHhhhhhcc
Confidence 45789999999999965 4778999999999999998888899999999888777777788889999999999999999
Q ss_pred hhhccccchhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEE
Q psy5372 84 AKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNI 163 (586)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~V 163 (586)
-+.+.++.+.+.... ....+||+|.+||||.|++|.+|.++.|+|+.++|. +|++|++|++
T Consensus 105 gf~r~krgyrp~~~f------------------d~~~~dplf~~qwylkntgqaggk~rldlnv~~awa-~g~tgknvtt 165 (629)
T KOG3526|consen 105 GFDRKKRGYRPINEF------------------DINMNDPLFTKQWYLKNTGQAGGKPRLDLNVAEAWA-LGYTGKNVTT 165 (629)
T ss_pred ccchhhccCCchhhh------------------ccccCCcccceeeeeecccccCCcccccccHHHHHh-hcccCCCceE
Confidence 999988876544322 223689999999999999999999999999999999 9999999999
Q ss_pred EEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCC-CCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC
Q psy5372 164 IIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDP-RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242 (586)
Q Consensus 164 aViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~ 242 (586)
+|+|+|||+-||||+.|+....+|+|..+++-|+|+|.+| .+.|||.|||.+++..+|++|.+|||++.++..+|++|.
T Consensus 166 aimddgvdymhpdlk~nynaeasydfssndpfpyprytddwfnshgtrcagev~aardngicgvgvaydskvagirmldq 245 (629)
T KOG3526|consen 166 AIMDDGVDYMHPDLKSNYNAEASYDFSSNDPFPYPRYTDDWFNSHGTRCAGEVVAARDNGICGVGVAYDSKVAGIRMLDQ 245 (629)
T ss_pred EeecCCchhcCcchhcccCceeecccccCCCCCCCcccchhhhccCccccceeeeeccCCceeeeeeeccccceeeecCC
Confidence 9999999999999999999999999999999999999863 689999999999999999999999999999999999997
Q ss_pred C-chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCC
Q psy5372 243 E-TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY 321 (586)
Q Consensus 243 ~-~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~ 321 (586)
. .+++++|..+...++.++|++.|||+.+++.++++|.+...+|+.+.+.++|+++|.|+|+|+|..|.. ++|++++|
T Consensus 246 pymtdlieansmghep~kihiysaswgptddgktvdgprnatmraiv~gvnegrnglgsiyvwasgdgge~-ddcncdgy 324 (629)
T KOG3526|consen 246 PYMTDLIEANSMGHEPSKIHIYSASWGPTDDGKTVDGPRNATMRAIVRGVNEGRNGLGSIYVWASGDGGED-DDCNCDGY 324 (629)
T ss_pred chhhhhhhhcccCCCCceEEEEecccCcCCCCcccCCchhHHHHHHHHhhhcccCCcccEEEEecCCCCCc-cccCCccc
Confidence 6 899999999999989999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CCCceEEEEeeecCCCCCCCCCCCCCcceeccccCC-CCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCC
Q psy5372 322 INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG-ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPN 400 (586)
Q Consensus 322 ~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~-~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~ 400 (586)
+++.+.|++-+.-++|+.+-|...|++.+.+.|+.+ -.|...+.+++..+.|+...+|||.|||-+||+.||.+++||.
T Consensus 325 aasmwtisinsaindg~nahydescsstlastfsng~rnpetgvattdlyg~ct~~hsgtsaaapeaagvfalaleanp~ 404 (629)
T KOG3526|consen 325 AASMWTISINSAINDGENAHYDESCSSTLASTFSNGGRNPETGVATTDLYGRCTRSHSGTSAAAPEAAGVFALALEANPS 404 (629)
T ss_pred hhheEEEEeehhhcCCccccccchhhHHHHHHhhcCCcCCCcceeeeccccceecccCCccccCccccceeeeeeccCCC
Confidence 999999999999999999999999999999999887 3577889999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCcCCCCCC---CCccccCCCcccCCcccccccCHHHHHHHHhccCCCCCcceeeeeeecCcceecC
Q psy5372 401 MTWRDCQHILAWTSEREPLSHV---SGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFS 477 (586)
Q Consensus 401 lt~~~v~~~L~~tA~~~~~~~~---~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~~~~~~~~~~~~~~~~~~i~ 477 (586)
|||++++.+-..|++.+..-+. -.|.-|+.|..|++.||||.+|+.+.|.+|+.|.++|+.+.|+... +..+..|+
T Consensus 405 ltwrd~qhltvltskrnslfd~~~rf~w~mngvglefnhlfgfgvldagamv~lak~wktvppryhc~ag~-i~~p~~ip 483 (629)
T KOG3526|consen 405 LTWRDLQHLTVLTSKRNSLFDGRCRFEWQMNGVGLEFNHLFGFGVLDAGAMVMLAKAWKTVPPRYHCTAGL-IDTPHEIP 483 (629)
T ss_pred cchhhhhheeeeecccchhhcccceEEEeccccceeeecccccccccHHHHHHHHHHhccCCCceeecccc-cCCccccc
Confidence 9999999999999988765442 2477799999999999999999999999999999999999999877 88899999
Q ss_pred CCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCCCCC-CCCCCcccceEeeeeec
Q psy5372 478 YASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQD-DCKTGFVDWSILTLKHW 556 (586)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~~~d-~~~~g~~~~~~~s~~f~ 556 (586)
..+.+-++++.+.|.|...++.++||||..+++..++||||.|.|+||.||++.|+++|+.| ++.+||.+|.||+.+-|
T Consensus 484 ~~g~l~lei~tdac~g~~~evrylehvqavis~natrrgdl~l~ltspmgtksmilsrrp~dddskdgftkwpfmtthtw 563 (629)
T KOG3526|consen 484 ADGNLILEINTDACAGSQFEVRYLEHVQAVISFNATRRGDLTLYLTSPMGTKSMILSRRPKDDDSKDGFTKWPFMTTHTW 563 (629)
T ss_pred CCCcEEEEEecccccCchhhHHHHHhhheeeEeccccccceeEEEecCCCceeeEeecCCCCcccccccccCceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999986 79999999999999999
Q ss_pred CCCCCceEEEEEEECCC---CCeee
Q psy5372 557 GEDPVGEWKFEIFDTKY---DGLLD 578 (586)
Q Consensus 557 GE~~~G~Wtl~v~d~~~---~g~l~ 578 (586)
||.++|+|+|+..-.+. .|.|+
T Consensus 564 ge~p~gtw~learf~gp~~~~g~lk 588 (629)
T KOG3526|consen 564 GENPTGTWRLEARFQGPGAHAGTLK 588 (629)
T ss_pred CcCCCceEEEEEeccCCcccccchh
Confidence 99999999999998753 55554
|
|
| >cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-54 Score=440.47 Aligned_cols=294 Identities=51% Similarity=0.932 Sum_probs=255.4
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCC
Q psy5372 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~ 199 (586)
||||++.+||+|++.+++.+.++.+|++.++|+ .+++|+||+|+|||+||+..||+|.+++....+|++.....++.|.
T Consensus 1 ~~dp~~~~qw~l~~~~~~~~~~~~~~~~~~~w~-~g~~G~gv~VaViDtGv~~~h~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
T cd04059 1 PNDPLFPYQWYLKNTGQAGGTPGLDLNVTPAWE-QGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPR 79 (297)
T ss_pred CCCcccccccccccCCCCCCCCCCCcccHHHHh-CCCCCcceEEEEEeCCcccCCHhHhhcccccccccccCCCCCCCCc
Confidence 699999999999999999999999999999999 9999999999999999999999999988766788888877666654
Q ss_pred CCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCc
Q psy5372 200 YEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGP 279 (586)
Q Consensus 200 ~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~ 279 (586)
.. +..+|||||||+|++..++..+..||||+|+|+++++++....+...+..+.+..+.++|||||||..........+
T Consensus 80 ~~-~~~gHGT~vAgiiag~~~~~~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~ 158 (297)
T cd04059 80 YD-DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158 (297)
T ss_pred cc-cccccCcceeeEEEeecCCCcccccccccceEeEEEecCCccccHHHHHHHhcccCCceEEECCCCCCCCCCccCCC
Confidence 32 67899999999999998777789999999999999999876555555555555556789999999987655444566
Q ss_pred hHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCC
Q psy5372 280 GKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 280 ~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
...+.+++++++.++++++|++||+||||++...+.+.+..++.++++|+|||++.++.++.||++|+.+++.+++.+..
T Consensus 159 ~~~~~~a~~~a~~~~~~~~gilvV~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~g~~~~~s~~g~~~~~~a~g~~~~ 238 (297)
T cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238 (297)
T ss_pred cHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCCCCCCCCCcccCCCceEEEEeeCCCCCCcCCCCCCCcEEEEecCCCCC
Confidence 66888999999998887789999999999999767788888889999999999999999999999999998877654422
Q ss_pred -CCCceEEecCC--CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 360 -DPVKIITTDVH--NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 360 -pg~~i~st~~~--~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
++..|++++.. ..++..++|||||||+|||++|||+|++|+|+++|||++|+.||+
T Consensus 239 ~~~~~i~~~~~~~~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~lt~~~v~~~L~~TA~ 297 (297)
T cd04059 239 NPEASIVTTDLGGNCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297 (297)
T ss_pred CCCCceEeCCCCCCCCcccccCCcchhhhhhHhHHHHhhccCCCCCHHHHHHHHHHhcC
Confidence 24568888766 477889999999999999999999999999999999999999985
|
Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation. |
| >PTZ00262 subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-52 Score=448.89 Aligned_cols=293 Identities=22% Similarity=0.219 Sum_probs=233.0
Q ss_pred ccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHc-CCCCCCCcEEEEEecCccCCCcccccCCCC----------
Q psy5372 115 KYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQE-LNINGAGVNIIIIDDGMEYTHEDIKDSFAP---------- 183 (586)
Q Consensus 115 ~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~-~~~~G~gv~VaViDtGid~~Hpdl~~~~~~---------- 183 (586)
..+..+|||.+..||+| ..++++++|+. .+.+|+||+|||||||||++||||.+++..
T Consensus 282 ~~~~~~ND~~~~~qWgL-----------d~i~~~~aw~~~~~~~g~gV~VAVIDTGID~~HPDL~~ni~~n~~el~Grdg 350 (639)
T PTZ00262 282 LGKYQFNDEGRNLQWGL-----------DLTRLDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVNVKELHGRKG 350 (639)
T ss_pred ccccccCCCCcccCcCc-----------chhCchHHHHHhhccCCCCcEEEEEccCCCCCChhhhhhcccccccccCccc
Confidence 34567999999999999 45678888872 245799999999999999999999987621
Q ss_pred -----------CCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHH
Q psy5372 184 -----------ELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLI 248 (586)
Q Consensus 184 -----------~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~ 248 (586)
..+|+|++++.+|. |.++|||||||||||.++|+.|+.||||+|+|+++|+++. ..++++
T Consensus 351 iDdD~nG~vdd~~G~nfVd~~~~P~-----D~~GHGTHVAGIIAA~gnN~~Gi~GVAP~AkLi~vKVld~~G~G~~sdI~ 425 (639)
T PTZ00262 351 IDDDNNGNVDDEYGANFVNNDGGPM-----DDNYHGTHVSGIISAIGNNNIGIVGVDKRSKLIICKALDSHKLGRLGDMF 425 (639)
T ss_pred cccccCCcccccccccccCCCCCCC-----CCCCcchHHHHHHhccccCCCceeeeecccccceEEEecCCCCccHHHHH
Confidence 23567776655553 7899999999999999889999999999999999999974 478999
Q ss_pred HHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCC------CCCC----
Q psy5372 249 ESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGD------NCAA---- 318 (586)
Q Consensus 249 ~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~------~~~~---- 318 (586)
.|+.|+.. ++++|||||||.... ...+.+|+++|.. +|+++|+||||++.... .|..
T Consensus 426 ~AI~yA~~-~GA~VINmSlG~~~~-------s~~l~~AV~~A~~-----kGILVVAAAGN~g~~~~s~p~~~~~d~~~~~ 492 (639)
T PTZ00262 426 KCFDYCIS-REAHMINGSFSFDEY-------SGIFNESVKYLEE-----KGILFVVSASNCSHTKESKPDIPKCDLDVNK 492 (639)
T ss_pred HHHHHHHH-CCCCEEEeccccCCc-------cHHHHHHHHHHHH-----CCCEEEEeCCCCCCCcccccccccccccccc
Confidence 99999998 899999999997532 2367788888877 79999999999986421 1111
Q ss_pred CCCC----CCceEEEEeeecCCCC----CCCCCCCC-CcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHH
Q psy5372 319 DGYI----NSIYTIAIASAREDGQ----SPFYSEEC-TGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAG 389 (586)
Q Consensus 319 ~~~~----~~~~vi~Vga~~~~~~----~a~~S~~G-~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG 389 (586)
..|+ ..++||+|||++.+.. .+.+|++| ..+++ .|||..|+++. +++.|..++|||||||||||
T Consensus 493 ~YPaa~s~~~~nVIaVGAv~~d~~~~~s~s~~Snyg~~~VDI------aAPG~dI~St~-p~g~Y~~~SGTSmAAP~VAG 565 (639)
T PTZ00262 493 VYPPILSKKLRNVITVSNLIKDKNNQYSLSPNSFYSAKYCQL------AAPGTNIYSTF-PKNSYRKLNGTSMAAPHVAA 565 (639)
T ss_pred cCChhhhccCCCEEEEeeccCCCCCcccccccccCCCCcceE------EeCCCCeeecc-CCCceeecCCCchhHHHHHH
Confidence 1222 2578999999986432 23445665 33444 56999999995 55678999999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccc-cccCHHHHHHHHhccCC
Q psy5372 390 VLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGF-GLINTFKLVSLAKNWVN 457 (586)
Q Consensus 390 ~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~-G~vna~~Av~~a~~~~~ 457 (586)
++|||++++|+|+++||+++|+.||.+.+.. ...+|| |+||+.+||++|.....
T Consensus 566 vAALLlS~~P~LT~~qV~~iL~~TA~~l~~~--------------~n~~~wgG~LDa~kAV~~Ai~~~~ 620 (639)
T PTZ00262 566 IASLILSINPSLSYEEVIRILKESIVQLPSL--------------KNKVKWGGYLDIHHAVNLAIASKH 620 (639)
T ss_pred HHHHHHhhCCCCCHHHHHHHHHHhCccCCCC--------------CCccccCcEEcHHHHHHHHHhccc
Confidence 9999999999999999999999999876432 123344 89999999999886544
|
|
| >KOG3525|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=402.49 Aligned_cols=428 Identities=44% Similarity=0.804 Sum_probs=388.7
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCC
Q psy5372 122 DEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYE 201 (586)
Q Consensus 122 dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~ 201 (586)
||.+..||||.+.. .+..++++..+|. .+++|+++.|+|+|+|++..||++..++....++++.....+|.|...
T Consensus 1 ~~~~~~~w~l~~~~----~~~~d~~v~~~~~-~~~~g~~~~~~i~ddgl~~~h~~~~~~~~~~~s~d~~~~~~~p~~~~~ 75 (431)
T KOG3525|consen 1 DPMSIHMWYLNAQE----FPGSDLNVQNAWC-KGYTGTRVSVTILDDGLECSHPDLRNNYDPLGSYDVNRHDNDPEPRCD 75 (431)
T ss_pred CCCccceEEecCCc----cccccceeeeccc-cCCCCCceEEEEeeccccccCcccccccCcceeEeeecCCCCcccccC
Confidence 67889999996654 4558999999999 999999999999999999999999999999999999999999988875
Q ss_pred C-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCch
Q psy5372 202 D-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPG 280 (586)
Q Consensus 202 ~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~ 280 (586)
. ....|||-|++-.++..+|..+..|++|++++..+++++...++...+....+....++|.+.|||..+++...+++.
T Consensus 76 ~~~~~~~g~~Ca~~~a~~~~~~~C~vg~~~~~~~~g~~~l~~~v~~~~~~~~~~~~~~~~di~scsw~pddd~~t~~~~~ 155 (431)
T KOG3525|consen 76 GTNENKHGTRCAGCVAARANNLTCGVGVAYNATIGGIRMLAGCVSDAVEAPSLGFGPCHIDIYSCSWGPDDDGKTCDGPG 155 (431)
T ss_pred CCCccccCCCCCcccccccCCCcCCCCcccCccccceeeeeeecccceecccccCCCCCceeecCcCCcccCCCcCCCCc
Confidence 4 468999999999999988999999999999999999999988888888888888789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCC
Q psy5372 281 KLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD 360 (586)
Q Consensus 281 ~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~ap 360 (586)
....+++..+...+|.++|.++|+|.||.+..++.+..+.+..+.+.++.+..+..+...+|+..+.....++++.+..+
T Consensus 156 ~l~~~~~~~~~~~g~~~~gs~~v~as~ngg~~~d~c~c~~y~~~i~t~~~~~~~~~~~~p~y~~~C~~~~~s~~s~~~~~ 235 (431)
T KOG3525|consen 156 TLAREALVYGRGCGRHGKGSIFVWASGNGGTCGDSCHCDGYTNSIYTLSISCATQCGKKPQYRERCASCLASTYSSGGPT 235 (431)
T ss_pred chhhhhhhccccccccCCCCeeEEEecCccccccccccccccCcceecccccccccCCCccccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888877654
Q ss_pred CCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccc
Q psy5372 361 PVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGF 440 (586)
Q Consensus 361 g~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~ 440 (586)
-..|.+++....+.....|||.++|+.||.++|.++++|.+++++++.+...++....... ..|..|.+|..+.+.||+
T Consensus 236 ~~~~~~~~~~~~c~e~h~g~s~~~~~~a~~~~~~~~~~~~ls~~d~~~l~~~~~~~~~~~~-~~~~~n~~g~~~~h~~g~ 314 (431)
T KOG3525|consen 236 EECIVCTDPRHSCTEGHTGTSASAPLAAGIIALALEANPCLSWRDSQHLIVLTSRPKVLLK-GKWKSNGAGGLVSHLYGF 314 (431)
T ss_pred ceeeeecCCCccccccCCCCcCccchhcchhhhhhccCccccccchhhhhhhhcchhhccC-CCceEecCCceeeeeecc
Confidence 5567777777788899999999999999999999999999999999999999999988887 499999999999999999
Q ss_pred cccCHHHHHHHHhccCCCCCcceeeeeeecCcceecCCCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEE
Q psy5372 441 GLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRI 520 (586)
Q Consensus 441 G~vna~~Av~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i 520 (586)
|++|+.+.+.+++.|..++.+..+......... .+.+.|. +.++|||+++++|.|+.+|+|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~------------~~~~~c~-----~~~lehv~~~~~i~~~~rg~l~~ 377 (431)
T KOG3525|consen 315 GLLDAKALVSCAKTWTTVPCQHCCPKDSLLRDR------------SDTDECK-----VKYLEHVQVRVTITHPRRGDLQL 377 (431)
T ss_pred cccCcchhhhhhccCccCCcccccCcchhhccc------------cccccee-----eeeeeeEEEEEEeecccccceEE
Confidence 999999999999999999998877544311110 2222232 67899999999999999999999
Q ss_pred EEEcCCCCEEEeecCCCCCCCCCCcccceEeeeeecCCCCCceEEEEEEECCC
Q psy5372 521 ELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTKY 573 (586)
Q Consensus 521 ~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~~ 573 (586)
.|.||+||.|.|+.+|+.|.+.+ |.+|+||++++|||.+.|+|+|.|.|..+
T Consensus 378 ~l~sp~g~~s~l~~~r~~d~~~~-f~dw~f~~v~~w~e~~~g~~~l~~~~~~~ 429 (431)
T KOG3525|consen 378 YLFSPSGTKSRLLAPRPRDHSYE-FTDWNFMTVHCWGENAEGTWKLEVQDVET 429 (431)
T ss_pred eeecCCceeecccccChhhhccc-ccCCcceeeeecccCcceeEEEEEecccC
Confidence 99999999999999999998888 99999999999999999999999998764
|
|
| >cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-46 Score=373.92 Aligned_cols=254 Identities=25% Similarity=0.312 Sum_probs=218.4
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCC
Q psy5372 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPR 199 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~ 199 (586)
|+||.|.+||+| ..+++.++|+ .+ +|+||+|+|||+||+.+||+|... ....++++.+.+.++.
T Consensus 2 ~~~~~~~~~w~~-----------~~~~~~~~~~-~~-~G~gv~I~viDsGi~~~h~~l~~~-~~~~~~~~~~~~~~~~-- 65 (260)
T cd07484 2 PNDPYYSYQWNL-----------DQIGAPKAWD-IT-GGSGVTVAVVDTGVDPTHPDLLKV-KFVLGYDFVDNDSDAM-- 65 (260)
T ss_pred CCCcCcccCCCc-----------cccChHHHHh-hc-CCCCCEEEEEeCCCCCCCcccccC-CcccceeccCCCCCCC--
Confidence 899999999999 5678999999 77 999999999999999999998543 2334566666554432
Q ss_pred CCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCC
Q psy5372 200 YEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKS 275 (586)
Q Consensus 200 ~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~ 275 (586)
+..+|||||||+|++..+++.++.|+||+|+|+.+++++. ...++.++++++.+ ++++|||||||...
T Consensus 66 ---d~~~HGT~vagii~~~~~~~~~~~Giap~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~-~~~~iin~S~g~~~---- 137 (260)
T cd07484 66 ---DDNGHGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDANGSGSLADIANGIRYAAD-KGAKVINLSLGGGL---- 137 (260)
T ss_pred ---CCCCcHHHHHHHHhCccCCCCceEeECCCCEEEEEEEECCCCCcCHHHHHHHHHHHHH-CCCeEEEecCCCCC----
Confidence 7789999999999999888889999999999999999874 36778889999888 78999999999864
Q ss_pred CCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecccc
Q psy5372 276 MDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYS 355 (586)
Q Consensus 276 ~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~ 355 (586)
....+.++++.+.+ +|++||+||||++... ...|+..+++|+||+++..+.++.||++|+.+++.
T Consensus 138 ---~~~~~~~~~~~a~~-----~gilvV~aaGN~g~~~----~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~--- 202 (260)
T cd07484 138 ---GSTALQEAINYAWN-----KGVVVVAAAGNEGVSS----VSYPAAYPGAIAVAATDQDDKRASFSNYGKWVDVS--- 202 (260)
T ss_pred ---CCHHHHHHHHHHHH-----CCCEEEEeCCCCCCCC----CCCCCCCCCeEEEEeeCCCCCcCCcCCCCCCceEE---
Confidence 23467778877776 6999999999998752 35577889999999999999999999999988774
Q ss_pred CCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcC
Q psy5372 356 GGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSERE 417 (586)
Q Consensus 356 ~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~ 417 (586)
+||..++++. ...+|..++|||||||+|||++|||++++| |+++||+++|+.||+++
T Consensus 203 ---apG~~i~~~~-~~~~~~~~~GTS~Aap~vag~~Al~~~~~p-~t~~~i~~~L~~tA~~~ 259 (260)
T cd07484 203 ---APGGGILSTT-PDGDYAYMSGTSMATPHVAGVAALLYSQGP-LSASEVRDALKKTADDI 259 (260)
T ss_pred ---eCCCCcEeec-CCCCEEEeeeHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHhCccC
Confidence 4888888875 446788999999999999999999999999 99999999999999875
|
Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid |
| >cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-46 Score=383.47 Aligned_cols=288 Identities=24% Similarity=0.300 Sum_probs=227.9
Q ss_pred chHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCC----CcccccCCCC----CCCCCCCC-CCCChHHHHHHHHhc
Q psy5372 147 IVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE----LSYNFNAEKW----DITPRYED-PRNKHGTRCAGELVM 217 (586)
Q Consensus 147 ~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~----~~~~~~~~~~----~~~~~~~~-d~~~HGT~vAgiia~ 217 (586)
++++|+ .+++|+||+|||||+||+++||+|.+++... .++++...+. .+.|...+ |..+|||||||+|++
T Consensus 2 v~~~~~-~g~tG~gv~VaViDsGid~~hp~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~ 80 (312)
T cd07489 2 VDKLHA-EGITGKGVKVAVVDTGIDYTHPALGGCFGPGCKVAGGYDFVGDDYDGTNPPVPDDDPMDCQGHGTHVAGIIAA 80 (312)
T ss_pred hhhHHh-CCCCCCCCEEEEEECCCCCCChhhhcCCCCCceeccccccCCcccccccCCCCCCCCCCCCCcHHHHHHHHhc
Confidence 678999 9999999999999999999999999876442 3355554331 11222222 678999999999999
Q ss_pred cCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHh
Q psy5372 218 KPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293 (586)
Q Consensus 218 ~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~ 293 (586)
..+| .++.||||+|+|+++|+++. ....+++++.++.+ ++++|||||||...... ...+.++++++.+
T Consensus 81 ~~~~-~~~~GiAp~a~i~~~~v~~~~~~~~~~~~~~ai~~a~~-~~~~iIn~S~g~~~~~~-----~~~~~~~~~~~~~- 152 (312)
T cd07489 81 NPNA-YGFTGVAPEATLGAYRVFGCSGSTTEDTIIAAFLRAYE-DGADVITASLGGPSGWS-----EDPWAVVASRIVD- 152 (312)
T ss_pred CCCC-CceEEECCCCEEEEEEeecCCCCCCHHHHHHHHHHHHh-cCCCEEEeCCCcCCCCC-----CCHHHHHHHHHHH-
Confidence 9665 78999999999999999863 35667888999887 79999999999754211 1356667777766
Q ss_pred ccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCC-C
Q psy5372 294 GRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHN-T 372 (586)
Q Consensus 294 ~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~-~ 372 (586)
+|+++|+||||++..... ....|+..+++|+||+++ +.||++|+.......+...+||..++++...+ +
T Consensus 153 ----~gv~iv~aaGN~g~~~~~-~~~~p~~~~~vi~Vga~~-----~~~s~~g~~~~~~~kpdv~ApG~~i~~~~~~~~~ 222 (312)
T cd07489 153 ----AGVVVTIAAGNDGERGPF-YASSPASGRGVIAVASVD-----SYFSSWGPTNELYLKPDVAAPGGNILSTYPLAGG 222 (312)
T ss_pred ----CCCEEEEECCCCCCCCCC-cccCCccCCCeEEEEEec-----CCccCCCCCCCCCcCccEEcCCCCEEEeeeCCCC
Confidence 699999999999875322 234567789999999998 77999999887666667788999999876543 3
Q ss_pred eeeccCCCCchHHHHHHHHHHHHhhC-CCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHH
Q psy5372 373 CTCEHSGTSAAAPIAAGVLALALEAN-PNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSL 451 (586)
Q Consensus 373 ~~~~~~GTS~AaP~VAG~aALl~~~~-p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~ 451 (586)
.|..++|||||||+|||++|||++++ |.+++++|+++|+.||......+. .+..+ +..++..+|||+||+.+||+.
T Consensus 223 ~~~~~~GTS~Aap~vaG~~Al~~~~~~~~~~~~~v~~~l~~ta~~~~~~~~-~~~~~--~~~~~~~~G~G~vn~~~a~~~ 299 (312)
T cd07489 223 GYAVLSGTSMATPYVAGAAALLIQARHGKLSPAELRDLLASTAKPLPWSDG-TSALP--DLAPVAQQGAGLVNAYKALYA 299 (312)
T ss_pred ceEeeccHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhCccccccCC-Ccccc--CCCCHhhcCcceeeHHHHhcC
Confidence 48889999999999999999999999 999999999999999998865441 22211 145678999999999999987
Q ss_pred HhccC
Q psy5372 452 AKNWV 456 (586)
Q Consensus 452 a~~~~ 456 (586)
+..+.
T Consensus 300 ~~~~~ 304 (312)
T cd07489 300 TTTLS 304 (312)
T ss_pred Ccccc
Confidence 76654
|
gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd05562 Peptidases_S53_like Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=368.39 Aligned_cols=250 Identities=21% Similarity=0.184 Sum_probs=189.7
Q ss_pred CCCCCCcEEEEEecCccCCCc--------ccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcce
Q psy5372 155 NINGAGVNIIIIDDGMEYTHE--------DIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGV 226 (586)
Q Consensus 155 ~~~G~gv~VaViDtGid~~Hp--------dl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~ 226 (586)
|++|+||+|||||+|||..|| +|.+++. +....... .|..+|||||||+|+
T Consensus 1 g~tG~gv~vaviDtGvd~~~~~~~~~~~~~l~~~~~------~~~~~~~~-----~d~~gHGT~vAgii~---------- 59 (275)
T cd05562 1 GVDGTGIKIGVISDGFDGLGDAADDQASGDLPGNVN------VLGDLDGG-----SGGGDEGRAMLEIIH---------- 59 (275)
T ss_pred CCCCCceEEEEEeCCccccccccccccCCCCCccee------eccccCCC-----CCCCchHHHHHHHHh----------
Confidence 579999999999999999765 4433322 11111111 178899999999994
Q ss_pred eeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEec
Q psy5372 227 GVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAA 306 (586)
Q Consensus 227 GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AA 306 (586)
||||+|+|+.+++.+ ..++++++++|+.+ ++++|||||||...... .....+.++++++.++ +|++||+||
T Consensus 60 GvAP~a~l~~~~~~~-~~~~i~~ai~~a~~-~g~~Vin~S~g~~~~~~---~~~~~~~~ai~~a~~~----~GvlvVaAA 130 (275)
T cd05562 60 DIAPGAELAFHTAGG-GELDFAAAIRALAA-AGADIIVDDIGYLNEPF---FQDGPIAQAVDEVVAS----PGVLYFSSA 130 (275)
T ss_pred ccCCCCEEEEEecCC-CHHHHHHHHHHHHH-cCCCEEEecccccCCCc---ccCCHHHHHHHHHHHc----CCcEEEEeC
Confidence 799999999999865 47889999999998 79999999999753221 1112467788877773 499999999
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCC---------------CCCcceeccccCCCCCCC-ceEEecCC
Q psy5372 307 GNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSE---------------ECTGLIATAYSGGISDPV-KIITTDVH 370 (586)
Q Consensus 307 GN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~---------------~G~~~~~~~~~~~~apg~-~i~st~~~ 370 (586)
||++.. .....|+..+++|+|||++..+.+..||+ +++.......++..+||. .+.++ ..
T Consensus 131 GN~g~~---~~~~~Pa~~~~vitVgA~~~~~~~~~~s~~~~~~~~s~~~~~~~~~p~~~~~~~~di~Apgg~~~~~~-~~ 206 (275)
T cd05562 131 GNDGQS---GSIFGHAAAPGAIAVGAVDYGNTPAFGSDPAPGGTPSSFDPVGIRLPTPEVRQKPDVTAPDGVNGTVD-GD 206 (275)
T ss_pred CCCCCC---CCccCCCCCCCeEEEEeeccCCCcccccccccCCCcccccCCcccCcCCCCCcCCeEEcCCcccccCC-Cc
Confidence 999984 23345788899999999999888775543 222222222333455643 33333 35
Q ss_pred CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHH
Q psy5372 371 NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVS 450 (586)
Q Consensus 371 ~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~ 450 (586)
++.|..++|||||||||||++|||++++|+|++.|||++|++||++..... ++..||||+||+.+||+
T Consensus 207 ~~~~~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~g------------~d~~~G~G~vda~~Av~ 274 (275)
T cd05562 207 GDGPPNFFGTSAAAPHAAGVAALVLSANPGLTPADIRDALRSTALDMGEPG------------YDNASGSGLVDADRAVA 274 (275)
T ss_pred CCceeecccchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccCCCC------------CCCCcCcCcccHHHHhh
Confidence 667889999999999999999999999999999999999999999875322 47789999999999996
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi |
| >cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=361.11 Aligned_cols=240 Identities=21% Similarity=0.243 Sum_probs=191.0
Q ss_pred HHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeec
Q psy5372 151 YQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCY 230 (586)
Q Consensus 151 w~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp 230 (586)
|+ ++++|+||+|||||+||+.+||+|++.. . ..++.... .. .|..+|||||||||++..+ ...||||
T Consensus 1 W~-~g~tG~gv~VaviDsGv~~~hp~l~~~~-~--~~~~~~~~-~~-----~d~~gHGT~VAGiIa~~~~---~~~GvAp 67 (255)
T cd07479 1 WQ-LGYTGAGVKVAVFDTGLAKDHPHFRNVK-E--RTNWTNEK-TL-----DDGLGHGTFVAGVIASSRE---QCLGFAP 67 (255)
T ss_pred CC-CCCCCCCCEEEEEeCCCCCCCcchhccc-c--ccccCCCC-CC-----CCCCCcHHHHHHHHHccCC---CceeECC
Confidence 77 8999999999999999999999998632 2 22333221 11 1678999999999999743 3589999
Q ss_pred CcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEec
Q psy5372 231 GARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAA 306 (586)
Q Consensus 231 ~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AA 306 (586)
+|+|+++|+++.. .+.++++++|++. ++++|||||||..... ...+.+++.++.. +|+++|+||
T Consensus 68 ~a~l~~~~v~~~~~~~~~~~~~~a~~~a~~-~~~~Vin~S~G~~~~~------~~~~~~~~~~~~~-----~gi~vV~aa 135 (255)
T cd07479 68 DAEIYIFRVFTNNQVSYTSWFLDAFNYAIL-TKIDVLNLSIGGPDFM------DKPFVDKVWELTA-----NNIIMVSAI 135 (255)
T ss_pred CCEEEEEEeecCCCCchHHHHHHHHHhhhh-cCCCEEEeeccCCCCC------CcHHHHHHHHHHH-----CCcEEEEEc
Confidence 9999999998653 4567889999887 7899999999975321 1235566666655 699999999
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCccee------ccccCCCCCCCceEEecCCCCeeeccCCC
Q psy5372 307 GNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIA------TAYSGGISDPVKIITTDVHNTCTCEHSGT 380 (586)
Q Consensus 307 GN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~------~~~~~~~apg~~i~st~~~~~~~~~~~GT 380 (586)
||++.... ....|+..+++|+|||++.++.++.||++|+.... ...++..+||..|+++.. .+.|..++||
T Consensus 136 GN~g~~~~--~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~~~~p~~~g~~~~di~apG~~i~~~~~-~~~~~~~sGT 212 (255)
T cd07479 136 GNDGPLYG--TLNNPADQMDVIGVGGIDFDDNIARFSSRGMTTWELPGGYGRVKPDIVTYGSGVYGSKL-KGGCRALSGT 212 (255)
T ss_pred CCCCCCcc--cccCcccCCCceEEeeeccCCccccccCCCCCcccccCCCCCcCccEEecCCCeecccc-CCCeEEeccH
Confidence 99987422 23457788999999999999999999999975422 112344678999988754 4457789999
Q ss_pred CchHHHHHHHHHHHHhhCC----CCCHHHHHHHHHhcCCcCC
Q psy5372 381 SAAAPIAAGVLALALEANP----NMTWRDCQHILAWTSEREP 418 (586)
Q Consensus 381 S~AaP~VAG~aALl~~~~p----~lt~~~v~~~L~~tA~~~~ 418 (586)
|||||+|||++|||++++| .|+|.+||++|++||++++
T Consensus 213 S~AaP~VaG~aAll~s~~p~~~~~~~p~~vk~~L~~sA~~~~ 254 (255)
T cd07479 213 SVASPVVAGAVALLLSTVPEKRDLINPASMKQALIESATRLP 254 (255)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCCHHHHHHHHHhhcccCC
Confidence 9999999999999999998 7999999999999999863
|
SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem |
| >cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=375.78 Aligned_cols=283 Identities=22% Similarity=0.253 Sum_probs=219.9
Q ss_pred HHHHcCCC-CCCCcEEEEEecCccCCCcccccCCCCC---------------------------CcccccCCCCCCCCCC
Q psy5372 149 PVYQELNI-NGAGVNIIIIDDGMEYTHEDIKDSFAPE---------------------------LSYNFNAEKWDITPRY 200 (586)
Q Consensus 149 ~aw~~~~~-~G~gv~VaViDtGid~~Hpdl~~~~~~~---------------------------~~~~~~~~~~~~~~~~ 200 (586)
++|+ .+. +|+||+|+|||+||+++||+|.+..... .+|+|.++..++.+.
T Consensus 1 ~~w~-~~~~~G~gv~VaViDtGv~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (346)
T cd07475 1 PLWD-KGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAGIGYGKYYNEKVPFAYNYADNNDDILDE- 78 (346)
T ss_pred Chhh-hcCCCCCCcEEEEEeCCCCCCChhHccCCCcccccchhhhhhhhcccCCCCcccccCCCeeEcCCCCCCccCCC-
Confidence 3799 655 9999999999999999999998754433 245666665554432
Q ss_pred CCCCCChHHHHHHHHhccCCC---CCcceeeecCcEEEEEEccCC------CchhHHHHHHhhhcCCCCeEEEcCCCCCC
Q psy5372 201 EDPRNKHGTRCAGELVMKPNN---SKCGVGVCYGARVGGVKLLDG------ETTDLIESKALQFGLDKVDIYSGSWGPPD 271 (586)
Q Consensus 201 ~~d~~~HGT~vAgiia~~~~n---~~g~~GVAp~a~l~~~~v~~~------~~~~~~~a~~~~~~~~~~~Vin~S~G~~~ 271 (586)
.+..+|||||||||+|..++ +.++.||||+|+|+++|+++. ....++.+++++.+ ++++|||||||...
T Consensus 79 -~~~~~HGT~vagiiag~~~~~~~~~~~~GiAp~a~l~~~~v~~~~~~~~~~~~~~~~ai~~a~~-~g~~Vin~S~G~~~ 156 (346)
T cd07475 79 -DDGSSHGMHVAGIVAGNGDEEDNGEGIKGVAPEAQLLAMKVFSNPEGGSTYDDAYAKAIEDAVK-LGADVINMSLGSTA 156 (346)
T ss_pred -CCCCCcHHHHHHHHhcCCCccccCCceEEeCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHH-cCCCEEEECCCcCC
Confidence 27789999999999999765 568999999999999999963 25667888888877 79999999999865
Q ss_pred CCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCC------------CCCCCCCceEEEEeeec-----
Q psy5372 272 DGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA------------ADGYINSIYTIAIASAR----- 334 (586)
Q Consensus 272 ~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~------------~~~~~~~~~vi~Vga~~----- 334 (586)
... .....+.++++++.. +|++||+||||++....... ...|...+++|+||+++
T Consensus 157 ~~~---~~~~~~~~~~~~a~~-----~giliv~aAGN~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~Vga~~~~~~~ 228 (346)
T cd07475 157 GFV---DLDDPEQQAIKRARE-----AGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDVLTVASANKKVPN 228 (346)
T ss_pred CCC---CCCCHHHHHHHHHhh-----CCeEEEEeCCCCCccCccccCcccccCCCcceecCCccCCCceEEeecccccCC
Confidence 432 233467788888776 69999999999987533221 22455678999999998
Q ss_pred -CCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhh----CCCCCHHH----
Q psy5372 335 -EDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA----NPNMTWRD---- 405 (586)
Q Consensus 335 -~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~----~p~lt~~~---- 405 (586)
..+.+..||++|+......+++..+||..++++. .+++|..++|||||||+|||++|||+|+ +|.|++.+
T Consensus 229 ~~~~~~~~~S~~G~~~~~~~~pdi~apG~~i~s~~-~~~~~~~~~GTS~AaP~VaG~aALl~~~~~~~~p~l~~~~~~~~ 307 (346)
T cd07475 229 PNGGQMSGFSSWGPTPDLDLKPDITAPGGNIYSTV-NDNTYGYMSGTSMASPHVAGASALVKQRLKEKYPKLSGEELVDL 307 (346)
T ss_pred CCCCccCCCcCCCCCcccCcCCeEEeCCCCeEEec-CCCceEeeCcHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 6677889999999877666677788999999985 4567889999999999999999999998 79999887
Q ss_pred HHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHH
Q psy5372 406 CQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVS 450 (586)
Q Consensus 406 v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~ 450 (586)
||++|+.||.+..... ..........+|||+||+.+||+
T Consensus 308 ik~~l~~ta~~~~~~~------~~~~~~~~~~~G~G~vn~~~Av~ 346 (346)
T cd07475 308 VKNLLMNTATPPLDSE------DTKTYYSPRRQGAGLIDVAKAIA 346 (346)
T ss_pred HHHHHHhcCCcccccC------CCCccCCccccCcchhcHHHhhC
Confidence 6778888888421111 01111234577999999999984
|
Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr |
| >cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-44 Score=354.88 Aligned_cols=232 Identities=22% Similarity=0.220 Sum_probs=193.2
Q ss_pred cEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEcc
Q psy5372 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLL 240 (586)
Q Consensus 161 v~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~ 240 (586)
|+|||||+||+.+||+|++++... +.+... .+ .+..+|||||||||++..++. .||||+|+|+.+|++
T Consensus 1 V~VavIDsGvd~~hp~l~~~~~~~--~~~~~~--~~-----~~~~~HGT~vAgiia~~~~~~---~Gvap~a~i~~~~v~ 68 (239)
T cd05561 1 VRVGMIDTGIDTAHPALSAVVIAR--LFFAGP--GA-----PAPSAHGTAVASLLAGAGAQR---PGLLPGADLYGADVF 68 (239)
T ss_pred CEEEEEeCCCCCCCcccccCcccc--ccCCCC--CC-----CCCCCCHHHHHHHHhCCCCCC---cccCCCCEEEEEEEe
Confidence 799999999999999998875442 222221 11 177899999999999986554 899999999999998
Q ss_pred CC-------CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCC
Q psy5372 241 DG-------ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNG 313 (586)
Q Consensus 241 ~~-------~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~ 313 (586)
+. ....++++++|+.. ++++|||||||... ...+.++++++.+ +|+++|+||||++...
T Consensus 69 ~~~~~~~~~~~~~i~~ai~~a~~-~g~~VIn~S~g~~~--------~~~l~~ai~~a~~-----~gilvv~AaGN~g~~~ 134 (239)
T cd05561 69 GRAGGGEGASALALARALDWLAE-QGVRVVNISLAGPP--------NALLAAAVAAAAA-----RGMVLVAAAGNDGPAA 134 (239)
T ss_pred cCCCCCCCcCHHHHHHHHHHHHH-CCCCEEEeCCCCCC--------CHHHHHHHHHHHH-----CCCEEEEecCCCCCCC
Confidence 63 35678999999988 89999999999642 2357788888877 6999999999998742
Q ss_pred CCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHH
Q psy5372 314 DNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLAL 393 (586)
Q Consensus 314 ~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aAL 393 (586)
....|+..+++|+|++++.++.+..||++|+.+++ .+||..|+++. .++.|..++|||||||+|||++||
T Consensus 135 ---~~~~Pa~~~~vi~V~a~~~~~~~~~~s~~g~~~di------~ApG~~i~~~~-~~~~~~~~sGTS~AaP~vaG~aAl 204 (239)
T cd05561 135 ---PPLYPAAYPGVIAVTAVDARGRLYREANRGAHVDF------AAPGVDVWVAA-PGGGYRYVSGTSFAAPFVTAALAL 204 (239)
T ss_pred ---CccCcccCCCceEEEeecCCCCccccCCCCCcceE------Eccccceeccc-CCCCEEEeCCHHHHHHHHHHHHHH
Confidence 22346677999999999999999999999998877 45899999875 455688999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCccccc
Q psy5372 394 ALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFG 441 (586)
Q Consensus 394 l~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G 441 (586)
|++++| |+++||+++|+.||++.+..+ ++..||||
T Consensus 205 l~~~~p-~~~~~i~~~L~~ta~~~g~~~------------~d~~~G~G 239 (239)
T cd05561 205 LLQASP-LAPDDARARLAATAKDLGPPG------------RDPVFGYG 239 (239)
T ss_pred HHhcCC-CCHHHHHHHHHHHhhccCCCC------------cCCCcCCC
Confidence 999999 999999999999999876544 57899998
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=366.55 Aligned_cols=248 Identities=21% Similarity=0.178 Sum_probs=181.1
Q ss_pred CCCcEEEEEecCccCCCcccccCCCCCC------------cccccCCCCCCCCCCCCCCCChHHHHHHHHhccCC-----
Q psy5372 158 GAGVNIIIIDDGMEYTHEDIKDSFAPEL------------SYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPN----- 220 (586)
Q Consensus 158 G~gv~VaViDtGid~~Hpdl~~~~~~~~------------~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~----- 220 (586)
|+||+|||||||||.+||||.++..... ++++..+.. + ...|.++|||||||||+|..+
T Consensus 1 G~gV~VaViDTGid~~HPdl~~~~~~~~~~~~d~~~~~~~g~d~~~~~~---~-~~~D~~gHGThvAGiiag~~~~~~~~ 76 (311)
T cd07497 1 GEGVVIAIVDTGVDYSHPDLDIYGNFSWKLKFDYKAYLLPGMDKWGGFY---V-IMYDFFSHGTSCASVAAGRGKMEYNL 76 (311)
T ss_pred CCCeEEEEEeCCcCCCChhHhcccCCCcccccCcCCCccCCcCCCCCcc---C-CCCCccccchhHHHHHhccCcccccc
Confidence 7999999999999999999987543211 122222111 0 011889999999999999854
Q ss_pred ----CCCcceeeecCcEEEEEEccCC-C-c---------hhHHHHHHhhhc-CCCCeEEEcCCCCCCCCCCCCCchHHHH
Q psy5372 221 ----NSKCGVGVCYGARVGGVKLLDG-E-T---------TDLIESKALQFG-LDKVDIYSGSWGPPDDGKSMDGPGKLSK 284 (586)
Q Consensus 221 ----n~~g~~GVAp~a~l~~~~v~~~-~-~---------~~~~~a~~~~~~-~~~~~Vin~S~G~~~~~~~~~~~~~~~~ 284 (586)
+..++.||||+|+|+++|+++. . . .....+++|.+. .++++|||||||..........+.....
T Consensus 77 ~~~~~~~g~~GVAP~A~l~~vkvl~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~VIN~S~G~~~~~~~~~~~g~~~~ 156 (311)
T cd07497 77 YGYTGKFLIRGIAPDAKIAAVKALWFGDVIYAWLWTAGFDPVDRKLSWIYTGGPRVDVISNSWGISNFAYTGYAPGLDIS 156 (311)
T ss_pred cccccccceeeeCCCCEEEEEEEEecCCcchhhhhhhccchhhhhhhhhhccCCCceEEEecCCcCCCCccccccCcCHH
Confidence 2457899999999999999852 1 1 111224556554 3689999999997543221111111122
Q ss_pred HHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecC---------------CCCCCCCCCCCCcc
Q psy5372 285 AAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARE---------------DGQSPFYSEECTGL 349 (586)
Q Consensus 285 ~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~---------------~~~~a~~S~~G~~~ 349 (586)
..+.+++.. .+|+++|+||||+|.. .+....|+..+++|+|||++. .+.++.||++||..
T Consensus 157 ~~~~d~~~~---~~Gv~vV~AAGN~g~~--~~~~~~Pa~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~fSs~Gp~~ 231 (311)
T cd07497 157 SLVIDALVT---YTGVPIVSAAGNGGPG--YGTITAPGAASLAISVGAATNFDYRPFYLFGYLPGGSGDVVSWSSRGPSI 231 (311)
T ss_pred HHHHHHHHh---cCCCEEEEeCCCCCCC--CccccCccCCCCeEEEEeccCCcccchhhhccccCCCCCccccccCCCCc
Confidence 223332221 2799999999999874 234456788899999999975 35678899999998
Q ss_pred eeccccCCCCCCCceEEecCCC---------CeeeccCCCCchHHHHHHHHHHHHhhCC------CCCHHHHHHHHHhcC
Q psy5372 350 IATAYSGGISDPVKIITTDVHN---------TCTCEHSGTSAAAPIAAGVLALALEANP------NMTWRDCQHILAWTS 414 (586)
Q Consensus 350 ~~~~~~~~~apg~~i~st~~~~---------~~~~~~~GTS~AaP~VAG~aALl~~~~p------~lt~~~v~~~L~~tA 414 (586)
+...+++..+||..++++.+.. ..|..++|||||||||||++|||++++| .+++.+||++|++||
T Consensus 232 ~g~~kPdv~ApG~~i~s~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~aALll~~~~~~~~~~~~~~~~vk~~L~~tA 311 (311)
T cd07497 232 AGDPKPDLAAIGAFAWAPGRVLDSGGALDGNEAFDLFGGTSMATPMTAGSAALVISALKEKEGVGEYDPFLVRTILMSTA 311 (311)
T ss_pred ccCCCCceeccCcceEeecccCCCCcccCCCcceeeecchhhhhHHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHHHhcC
Confidence 7778888899999998875432 2588899999999999999999999876 689999999999987
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=363.54 Aligned_cols=239 Identities=22% Similarity=0.264 Sum_probs=187.9
Q ss_pred CCcEEEEEecCccCCCcccccCC--------------------CCCCcccccCCC-------CCCCCC----------CC
Q psy5372 159 AGVNIIIIDDGMEYTHEDIKDSF--------------------APELSYNFNAEK-------WDITPR----------YE 201 (586)
Q Consensus 159 ~gv~VaViDtGid~~Hpdl~~~~--------------------~~~~~~~~~~~~-------~~~~~~----------~~ 201 (586)
++|+|||||||||++||||++++ +...+|+|.... .++... ..
T Consensus 1 ~~V~VaviDtGid~~Hpdl~~~~~~n~~e~~~~~~d~d~ng~~dd~~g~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (291)
T cd07483 1 KTVIVAVLDSGVDIDHEDLKGKLWINKKEIPGNGIDDDNNGYIDDVNGWNFLGQYDPRRIVGDDPYDLTEKGYGNNDVNG 80 (291)
T ss_pred CceEEEEEeCCCCCCChhhhhhhhcCCcccCCCCccCCCCCccccccCeeccCCcccccccccCccccccccccccccCC
Confidence 58999999999999999999764 234567776421 011000 00
Q ss_pred C-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC---CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC
Q psy5372 202 D-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG---ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD 277 (586)
Q Consensus 202 ~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~---~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~ 277 (586)
+ +..+|||||||||++..+|+.|+.||||+|+|+++|+++. ...++++|++|+.. ++++|||||||....
T Consensus 81 ~~~~~gHGT~VAGiIaa~~~n~~g~~GvAp~a~i~~~k~~~~g~~~~~~i~~Ai~~a~~-~g~~IiN~S~G~~~~----- 154 (291)
T cd07483 81 PISDADHGTHVAGIIAAVRDNGIGIDGVADNVKIMPLRIVPNGDERDKDIANAIRYAVD-NGAKVINMSFGKSFS----- 154 (291)
T ss_pred CCCCCCcHHHHHHHHhCcCCCCCceEEECCCCEEEEEEEecCCCcCHHHHHHHHHHHHH-CCCcEEEeCCCCCCC-----
Confidence 1 4789999999999999999999999999999999999752 35778899999987 899999999996421
Q ss_pred CchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCC-CC------CCCCCceEEEEeeecCCCC---CCCCCCCCC
Q psy5372 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCA-AD------GYINSIYTIAIASAREDGQ---SPFYSEECT 347 (586)
Q Consensus 278 ~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~-~~------~~~~~~~vi~Vga~~~~~~---~a~~S~~G~ 347 (586)
.....+.++++++.+ +|+|+|+||||++...+... ++ .+...+++|+|||++..+. ++.||++|+
T Consensus 155 ~~~~~~~~ai~~a~~-----~gilvV~AAGN~g~~~~~~~~~p~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~~Sn~G~ 229 (291)
T cd07483 155 PNKEWVDDAIKYAES-----KGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSKKYENNLVANFSNYGK 229 (291)
T ss_pred CccHHHHHHHHHHHh-----CCeEEEEeCCCCCCCCCcCcCCCCcccccCccccCCeeEEeeccccCCcccccccCCCCC
Confidence 122356777777765 79999999999997543221 11 1223478999999987654 689999997
Q ss_pred -cceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 348 -GLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 348 -~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
.+++ .+||..|+++. .++.|..++|||||||+|||++|||++++|+|+++|||++|+.||+
T Consensus 230 ~~vdi------~APG~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAl~~s~~p~lt~~~v~~~L~~ta~ 291 (291)
T cd07483 230 KNVDV------FAPGERIYSTT-PDNEYETDSGTSMAAPVVSGVAALIWSYYPNLTAKEVKQIILESGV 291 (291)
T ss_pred CceEE------EeCCCCeEecc-CcCCeEeeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCC
Confidence 3444 45899999985 4566889999999999999999999999999999999999999984
|
Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat |
| >cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-44 Score=358.41 Aligned_cols=246 Identities=21% Similarity=0.184 Sum_probs=188.0
Q ss_pred CCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCc
Q psy5372 145 LNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKC 224 (586)
Q Consensus 145 i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g 224 (586)
|++.++|+..+..|+||+|+|||+|||.+||||++++.... +. . .+ .|.++|||||||||+|. +|+.|
T Consensus 2 i~~~~aw~~~~g~G~gV~VaviDtGid~~Hpdl~~~~~~~~--~~---~-~~-----~d~~gHGT~VAGiIaa~-~n~~G 69 (277)
T cd04843 2 INARYAWTKPGGSGQGVTFVDIEQGWNLNHEDLVGNGITLI--SG---L-TD-----QADSDHGTAVLGIIVAK-DNGIG 69 (277)
T ss_pred CChHHHHHhcCCCCCcEEEEEecCCCCCCChhhcccccccc--CC---C-CC-----CCCCCCcchhheeeeee-cCCCc
Confidence 78999999335458999999999999999999998765421 11 0 01 17789999999999997 68889
Q ss_pred ceeeecCcEEEEEEccCCCchhHHHHHHhhhc---CCCCeEEEcCCCCCCCCCCCC--CchHHHHHHHHHHHHhccCCCC
Q psy5372 225 GVGVCYGARVGGVKLLDGETTDLIESKALQFG---LDKVDIYSGSWGPPDDGKSMD--GPGKLSKAAIDRGIREGRQGKG 299 (586)
Q Consensus 225 ~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~---~~~~~Vin~S~G~~~~~~~~~--~~~~~~~~a~~~a~~~~~~~~G 299 (586)
+.||||+|+|+++|+++ .+++++++.+++. ..++.+||||||......... .....+.++++++.. +|
T Consensus 70 ~~GvAp~a~l~~i~v~~--~~~~~~ai~~A~~~~~~~~v~~in~s~g~~~~~~~~~p~~~~~~~~~av~~a~~-----~G 142 (277)
T cd04843 70 VTGIAHGAQAAVVSSTR--VSNTADAILDAADYLSPGDVILLEMQTGGPNNGYPPLPVEYEQANFDAIRTATD-----LG 142 (277)
T ss_pred eeeeccCCEEEEEEecC--CCCHHHHHHHHHhccCCCCEEEEEccccCCCcCcccCcchhhHHHHHHHHHHHh-----CC
Confidence 99999999999999986 3455566666554 246788999999864332211 122234556666654 79
Q ss_pred cEEEEecCCCCCCCCCCCC-------CCCC--CCceEEEEeeecCCC-C-CCCCCCCCCcceeccccCCCCCCCceEEec
Q psy5372 300 VLFVFAAGNGKYNGDNCAA-------DGYI--NSIYTIAIASAREDG-Q-SPFYSEECTGLIATAYSGGISDPVKIITTD 368 (586)
Q Consensus 300 i~~V~AAGN~g~~~~~~~~-------~~~~--~~~~vi~Vga~~~~~-~-~a~~S~~G~~~~~~~~~~~~apg~~i~st~ 368 (586)
+++|+||||++...+.+.+ ..++ ..+++|+|||++.++ . ++.|||+|+.+++. +||..|+++.
T Consensus 143 ~~vV~AAGN~~~~~~~~~~~~g~~~~~~~~~~~~~~vI~VgA~~~~~~~~~~~fSn~G~~vdi~------APG~~i~s~~ 216 (277)
T cd04843 143 IIVVEAAGNGGQDLDAPVYNRGPILNRFSPDFRDSGAIMVGAGSSTTGHTRLAFSNYGSRVDVY------GWGENVTTTG 216 (277)
T ss_pred cEEEEeCCCCCccccCcccccccccccCCcCcCCCCeEEEEeccCCCCCccccccCCCCccceE------cCCCCeEecC
Confidence 9999999999886443332 1222 236799999999764 3 79999999988874 5899999986
Q ss_pred CCCC---------eeeccCCCCchHHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCC
Q psy5372 369 VHNT---------CTCEHSGTSAAAPIAAGVLALALEA-----NPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 369 ~~~~---------~~~~~~GTS~AaP~VAG~aALl~~~-----~p~lt~~~v~~~L~~tA~ 415 (586)
..+. +|..++|||||||+|||++|||++. +|+|+++|||++|+.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~sGTS~AaP~VaG~aALl~s~~~~~~~p~lt~~~v~~~L~~t~~ 277 (277)
T cd04843 217 YGDLQDLGGENQDYTDSFSGTSSASPIVAGAAASIQGIAKQKGGTPLTPIEMRELLTATGT 277 (277)
T ss_pred CCCcccccCCCCcceeeecccchhhHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhcCC
Confidence 5432 4578999999999999999999863 599999999999999874
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=350.63 Aligned_cols=245 Identities=24% Similarity=0.281 Sum_probs=203.1
Q ss_pred CcccccCCCCCCCCCCCCchH-HHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCCh
Q psy5372 129 WYEQDYRLSNSSKKLDLNIVP-VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207 (586)
Q Consensus 129 w~l~~~~~~~~~~~~~i~~~~-aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~H 207 (586)
|+|+.+.+ ....... .|. .+++|+||+|||||+||+.+||+|.++... .+++...... .|..+|
T Consensus 1 w~l~~~~~------~~~~~~~~~~~-~~~~G~gv~VaViDsGi~~~h~~~~~~~~~--~~~~~~~~~~------~d~~~H 65 (255)
T cd04077 1 WGLDRISQ------RDLPLDGTYYY-DSSTGSGVDVYVLDTGIRTTHVEFGGRAIW--GADFVGGDPD------SDCNGH 65 (255)
T ss_pred CCccccCC------CCCCCCCceEe-cCCCCCCcEEEEEcCCCCCCChhhhCCeee--eeecCCCCCC------CCCCcc
Confidence 88877765 2333333 666 789999999999999999999999987544 4555544321 178899
Q ss_pred HHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCC----CCeEEEcCCCCCCCCCCCCCc
Q psy5372 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLD----KVDIYSGSWGPPDDGKSMDGP 279 (586)
Q Consensus 208 GT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~----~~~Vin~S~G~~~~~~~~~~~ 279 (586)
||||||+|++.. .||||+|+|+++|+++.. .+.++.++.|+.... +++|||||||...
T Consensus 66 GT~vAgiia~~~------~GvAp~a~i~~~~i~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~iin~S~g~~~-------- 131 (255)
T cd04077 66 GTHVAGTVGGKT------YGVAKKANLVAVKVLDCNGSGTLSGIIAGLEWVANDATKRGKPAVANMSLGGGA-------- 131 (255)
T ss_pred HHHHHHHHHccc------cCcCCCCeEEEEEEeCCCCCcCHHHHHHHHHHHHhcccccCCCeEEEeCCCCCC--------
Confidence 999999999873 799999999999998743 677888999888753 6999999999753
Q ss_pred hHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCC
Q psy5372 280 GKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 280 ~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
...+.++++++.+ +|+++|+||||++.... ...|+..+++|+||+++.++.++.||++|+.+++. +
T Consensus 132 ~~~~~~~~~~~~~-----~g~liV~aaGN~g~~~~---~~~pa~~~~vi~Vga~~~~~~~~~~S~~g~~~~i~------a 197 (255)
T cd04077 132 STALDAAVAAAVN-----AGVVVVVAAGNSNQDAC---NYSPASAPEAITVGATDSDDARASFSNYGSCVDIF------A 197 (255)
T ss_pred CHHHHHHHHHHHH-----CCCEEEEeCCCCCCCCC---CcCccCCCceEEEeccCCCCCccCcccCCCCCcEE------e
Confidence 2367788888887 69999999999987522 45677889999999999999999999999988774 4
Q ss_pred CCCceEEecCC-CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCc
Q psy5372 360 DPVKIITTDVH-NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSER 416 (586)
Q Consensus 360 pg~~i~st~~~-~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~ 416 (586)
||..|.++... +..|..++|||||||+|||++|||++++|+++++|||++|++||++
T Consensus 198 pG~~i~~~~~~~~~~~~~~~GTS~Aap~vaG~~All~~~~p~~~~~~v~~~L~~tA~~ 255 (255)
T cd04077 198 PGVDILSAWIGSDTATATLSGTSMAAPHVAGLAAYLLSLGPDLSPAEVKARLLNLATK 255 (255)
T ss_pred CCCCeEecccCCCCcEEeeCcHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhccC
Confidence 88888887642 5578899999999999999999999999999999999999999974
|
The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti |
| >cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-43 Score=350.26 Aligned_cols=246 Identities=19% Similarity=0.148 Sum_probs=195.3
Q ss_pred HHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeee
Q psy5372 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVC 229 (586)
Q Consensus 150 aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVA 229 (586)
+|+ .+++|+||+|||||+|+|.+||+|+++.... ++....... ...+..+|||||||+|++...+ ++.|||
T Consensus 2 lw~-~g~~g~gV~VaViDsGid~~hp~l~~~~~~~--~~~~~~~~~----~~~~~~gHGT~VAgii~g~~~~--~~~GvA 72 (267)
T cd07476 2 LFA-FGGGDPRITIAILDGPVDRTHPCFRGANLTP--LFTYAAAAC----QDGGASAHGTHVASLIFGQPCS--SVEGIA 72 (267)
T ss_pred cee-ccCCCCCeEEEEeCCCcCCCChhhCCCcccc--ccCccccCC----CCCCCCCcHHHHHHHHhcCCCC--CceeEC
Confidence 688 9999999999999999999999998843221 111110000 0116789999999999997543 579999
Q ss_pred cCcEEEEEEccCCC-----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEE
Q psy5372 230 YGARVGGVKLLDGE-----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304 (586)
Q Consensus 230 p~a~l~~~~v~~~~-----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~ 304 (586)
|+|+|+.++++... ..++.+++.++.. ++++|||||||..... ......+.++++++.+ +|+++|+
T Consensus 73 p~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~-~g~~VIN~S~G~~~~~---~~~~~~l~~a~~~a~~-----~gvlvv~ 143 (267)
T cd07476 73 PLCRGLNIPIFAEDRRGCSQLDLARAINLALE-QGAHIINISGGRLTQT---GEADPILANAVAMCQQ-----NNVLIVA 143 (267)
T ss_pred cCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHH-CCCCEEEecCCcCCCC---CCCCHHHHHHHHHHHH-----CCCEEEE
Confidence 99999999997532 4678899999987 8899999999975421 1233467788887776 6999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchH
Q psy5372 305 AAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAA 384 (586)
Q Consensus 305 AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~Aa 384 (586)
||||++.. ....|+..+++|+|||++..+.+..||++|+... .+...+||..|+++. +++.|..++||||||
T Consensus 144 AaGN~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~---~~~l~ApG~~i~~~~-~~~~~~~~sGTS~Aa 215 (267)
T cd07476 144 AAGNEGCA----CLHVPAALPSVLAVGAMDDDGLPLKFSNWGADYR---KKGILAPGENILGAA-LGGEVVRRSGTSFAA 215 (267)
T ss_pred ecCCCCCC----CCCCcccCCceEEEEeecCCCCeeeecCCCCCCC---CceEEecCCCceeec-CCCCeEEeccHHHHH
Confidence 99999864 2345677899999999999999999999997542 122356999999885 456688999999999
Q ss_pred HHHHHHHHHHHhhCCC----CCHHHHHHHHHhcCCcCCCCC
Q psy5372 385 PIAAGVLALALEANPN----MTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 385 P~VAG~aALl~~~~p~----lt~~~v~~~L~~tA~~~~~~~ 421 (586)
|+|||++|||++.+|. +++++||++|++||+++....
T Consensus 216 P~vaG~aALl~s~~~~~~~~~~~~~vk~~L~~tA~~~~~~~ 256 (267)
T cd07476 216 AIVAGIAALLLSLQLRRGAPPDPLAVRRALLETATPCDPEA 256 (267)
T ss_pred HHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHHhCccCCCcc
Confidence 9999999999999887 999999999999999986543
|
Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). |
| >cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=356.31 Aligned_cols=270 Identities=25% Similarity=0.270 Sum_probs=210.1
Q ss_pred CCCcEEEEEecCccCCCcccccCC----CCCCcccccCCCCCCCCCC----------CCCCCChHHHHHHHHhccCCCCC
Q psy5372 158 GAGVNIIIIDDGMEYTHEDIKDSF----APELSYNFNAEKWDITPRY----------EDPRNKHGTRCAGELVMKPNNSK 223 (586)
Q Consensus 158 G~gv~VaViDtGid~~Hpdl~~~~----~~~~~~~~~~~~~~~~~~~----------~~d~~~HGT~vAgiia~~~~n~~ 223 (586)
|+||+|+|||+||+++||+|.++. ....++++.....++.+.. ..+..+|||||||+|++..+|+.
T Consensus 1 G~gV~VaViDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HGT~vAgiiag~~~n~~ 80 (295)
T cd07474 1 GKGVKVAVIDTGIDYTHPDLGGPGFPNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAGDATGHGTHVAGIIAGNGVNVG 80 (295)
T ss_pred CCCCEEEEEECCcCCCCcccccCCCCCCceeeeeECccCCCCcccccccccccccCCCCCCCCcHHHHHHHHhcCCCccC
Confidence 899999999999999999998321 1223566665544443211 11578999999999999988999
Q ss_pred cceeeecCcEEEEEEccC----CCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCC
Q psy5372 224 CGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299 (586)
Q Consensus 224 g~~GVAp~a~l~~~~v~~----~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~G 299 (586)
++.||||+|+|+.+|+++ ....++++++++++. ++++|||||||..... +...+.++++++.+ +|
T Consensus 81 ~~~Giap~a~i~~~~~~~~~~~~~~~~~~~ai~~a~~-~~~~Iin~S~g~~~~~-----~~~~~~~~~~~~~~-----~g 149 (295)
T cd07474 81 TIKGVAPKADLYAYKVLGPGGSGTTDVIIAAIEQAVD-DGMDVINLSLGSSVNG-----PDDPDAIAINNAVK-----AG 149 (295)
T ss_pred ceEeECCCCeEEEEEeecCCCCCCHHHHHHHHHHHHH-cCCCEEEeCCCCCCCC-----CCCHHHHHHHHHHh-----cC
Confidence 999999999999999986 247788999999988 7999999999975432 23367788888877 69
Q ss_pred cEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecC-----CCCCCCCCCCC-CcceeccccCCCCCCCceEEecCC-CC
Q psy5372 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARE-----DGQSPFYSEEC-TGLIATAYSGGISDPVKIITTDVH-NT 372 (586)
Q Consensus 300 i~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~-----~~~~a~~S~~G-~~~~~~~~~~~~apg~~i~st~~~-~~ 372 (586)
+++|+||||++.... ....|+..+++|+||+++. ......|++.| +.......++..+||..++++... +.
T Consensus 150 il~V~aAGN~g~~~~--~~~~pa~~~~~i~Vga~~~~~~~~~~~~~~~~s~~~~~~~~~~kpdv~apG~~i~~~~~~~~~ 227 (295)
T cd07474 150 VVVVAAAGNSGPAPY--TIGSPATAPSAITVGASTVADVAEADTVGPSSSRGPPTSDSAIKPDIVAPGVDIMSTAPGSGT 227 (295)
T ss_pred CEEEEECCCCCCCCC--cccCCCcCCCeEEEeeeeccCcCCCCceeccCCCCCCCCCCCcCCCEECCcCceEeeccCCCC
Confidence 999999999987532 2345778899999999862 33344455544 333344455667899999988644 25
Q ss_pred eeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHH
Q psy5372 373 CTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKL 448 (586)
Q Consensus 373 ~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~A 448 (586)
.|..++|||||||+|||++|||++++|+|++++||++|+.||++....+. .+ .++..+|||+||+.+|
T Consensus 228 ~~~~~~GTS~AaP~vaG~aAll~~~~p~l~~~~v~~~L~~tA~~~~~~~~-~~-------~~~~~~G~G~l~~~~A 295 (295)
T cd07474 228 GYARMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALMNTAKPLYDSDG-VV-------YPVSRQGAGRVDALRA 295 (295)
T ss_pred ceEEeccHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCcccccCCC-Cc-------CChhccCcceeccccC
Confidence 68899999999999999999999999999999999999999998865441 11 1467899999999876
|
The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=349.20 Aligned_cols=241 Identities=25% Similarity=0.298 Sum_probs=191.4
Q ss_pred CCCcEEEEEecCccCCCcccccCCCCCCc------ccccCCCC-CCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeec
Q psy5372 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELS------YNFNAEKW-DITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCY 230 (586)
Q Consensus 158 G~gv~VaViDtGid~~Hpdl~~~~~~~~~------~~~~~~~~-~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp 230 (586)
|+||+|||||+||+.+||+|.+++..... +++.+... .+.| .|..+|||||||+|++..+++.+ .||||
T Consensus 1 G~GV~VaViDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~d~~~HGT~vagii~g~~~~~~~-~GvAp 76 (264)
T cd07481 1 GTGIVVANIDTGVDWTHPALKNKYRGWGGGSADHDYNWFDPVGNTPLP---YDDNGHGTHTMGTMVGNDGDGQQ-IGVAP 76 (264)
T ss_pred CCCcEEEEEeCCCCCCChhHhhcccccCCCCcccccccccCCCCCCCC---CCCCCchhhhhhheeecCCCCCc-eEECC
Confidence 89999999999999999999987433211 11111110 0111 16789999999999998665544 99999
Q ss_pred CcEEEEEEccCC---CchhHHHHHHhhhc-----------CCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccC
Q psy5372 231 GARVGGVKLLDG---ETTDLIESKALQFG-----------LDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQ 296 (586)
Q Consensus 231 ~a~l~~~~v~~~---~~~~~~~a~~~~~~-----------~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 296 (586)
+|+|+.+|+++. ...++++++++++. .++++|||||||.... ....+..+++.+..
T Consensus 77 ~a~i~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~Iin~S~G~~~~------~~~~~~~~~~~~~~---- 146 (264)
T cd07481 77 GARWIACRALDRNGGNDADYLRCAQWMLAPTDSAGNPADPDLAPDVINNSWGGPSG------DNEWLQPAVAAWRA---- 146 (264)
T ss_pred CCeEEEEEeecCCCCcHHHHHHHHHHHHhcccccccccccccCCeEEEeCCCcCCC------CchHHHHHHHHHHH----
Confidence 999999999874 35678888888764 2578999999998643 12355666666655
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeec
Q psy5372 297 GKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCE 376 (586)
Q Consensus 297 ~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~ 376 (586)
+|++||+||||++.....+. ..|+.++++|+||+++.++.++.||++|+......+++..+||..|.++. .+++|..
T Consensus 147 -~gvlvV~aaGN~~~~~~~~~-~~pa~~~~vi~Vga~~~~~~~~~~S~~g~~~~~~~~~dv~ApG~~i~s~~-~~~~~~~ 223 (264)
T cd07481 147 -AGIFPVFAAGNDGPRCSTLN-APPANYPESFAVGATDRNDVLADFSSRGPSTYGRIKPDISAPGVNIRSAV-PGGGYGS 223 (264)
T ss_pred -CCCEEEEECCCCCCCCCCCc-CCCCcCCceEEEEecCCCCCCccccCCCCCCCCCcCceEEECCCCeEEec-CCCceEe
Confidence 79999999999987543332 46778899999999999999999999999885555556678999999885 4577889
Q ss_pred cCCCCchHHHHHHHHHHHHhhCCC--CCHHHHHHHHHhcCC
Q psy5372 377 HSGTSAAAPIAAGVLALALEANPN--MTWRDCQHILAWTSE 415 (586)
Q Consensus 377 ~~GTS~AaP~VAG~aALl~~~~p~--lt~~~v~~~L~~tA~ 415 (586)
++|||||||+|||++|||+|++|+ |+++|||++|+.||+
T Consensus 224 ~~GTS~AaP~vaG~aAll~~~~p~~~l~~~~v~~~L~~tA~ 264 (264)
T cd07481 224 SSGTSMAAPHVAGVAALLWSANPSLIGDVDATEAILTETAR 264 (264)
T ss_pred eCcHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHhcC
Confidence 999999999999999999999999 999999999999985
|
Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. |
| >cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=346.33 Aligned_cols=242 Identities=19% Similarity=0.202 Sum_probs=194.7
Q ss_pred CcEEEEEecCccCCCcccc-----cCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEE
Q psy5372 160 GVNIIIIDDGMEYTHEDIK-----DSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARV 234 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l 234 (586)
||+|||||+||+.+||+|. .+.....+++|.++..++ ..+..+|||||||+|++..++ .+.||||+|+|
T Consensus 1 Gv~VaviDsGi~~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~HGT~vagiia~~~~~--~~~GvAp~a~l 74 (261)
T cd07493 1 GITIAVIDAGFPKVHEAFAFKHLFKNLRILGEYDFVDNSNNT----NYTDDDHGTAVLSTMAGYTPG--VMVGTAPNASY 74 (261)
T ss_pred CCEEEEEccCCCccCcchhhhccccCCceeeeecCccCCCCC----CCCCCCchhhhheeeeeCCCC--CEEEeCCCCEE
Confidence 7999999999999999994 333444567887776554 117789999999999998553 47999999999
Q ss_pred EEEEccCCC------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCC--------CCCchHHHHHHHHHHHHhccCCCCc
Q psy5372 235 GGVKLLDGE------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKS--------MDGPGKLSKAAIDRGIREGRQGKGV 300 (586)
Q Consensus 235 ~~~~v~~~~------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~--------~~~~~~~~~~a~~~a~~~~~~~~Gi 300 (586)
+.+|+.+.. ...++.+++++.. ++++|||||||....... ..+....+.++++++.. +|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ai~~a~~-~~v~VIn~S~G~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~-----~gi 148 (261)
T cd07493 75 YLARTEDVASETPVEEDNWVAAAEWADS-LGVDIISSSLGYTTFDNPTYSYTYADMDGKTSFISRAANIAAS-----KGM 148 (261)
T ss_pred EEEEecccCCcccccHHHHHHHHHHHHH-cCCCEEEeCCCcCCCCCcccccccccccccchHHHHHHHHHHh-----CCe
Confidence 999986532 3456788888776 789999999997653321 11222356677777766 699
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCC
Q psy5372 301 LFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380 (586)
Q Consensus 301 ~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GT 380 (586)
++|+||||++... ......|+..+++|+|||++.++.++.||++|+......+++..+||..+++.. ..+.|..++||
T Consensus 149 lvv~AAGN~g~~~-~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~~~~~~pdi~a~G~~~~~~~-~~~~~~~~sGT 226 (261)
T cd07493 149 LVVNSAGNEGSTQ-WKGIGAPADAENVLSVGAVDANGNKASFSSIGPTADGRLKPDVMALGTGIYVIN-GDGNITYANGT 226 (261)
T ss_pred EEEEECCCCCCCC-CCcccCcccCCceEEEEEeccCCCCCccCCcCCCCCCCcCCceEecCCCeEEEc-CCCcEEeeCcH
Confidence 9999999999752 234566788899999999999999999999999876555666678999998864 45668899999
Q ss_pred CchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 381 SAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 381 S~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
|||||+|||++|||++++|+|++.|||++|+.||+
T Consensus 227 S~AaP~vaG~aAll~~~~p~lt~~~i~~~l~~tA~ 261 (261)
T cd07493 227 SFSCPLIAGLIACLWQAHPNWTNLQIKEAILKSAS 261 (261)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=347.47 Aligned_cols=247 Identities=24% Similarity=0.309 Sum_probs=193.2
Q ss_pred HHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC------CCCCCCCCChHHHHHHHHhccCCCC
Q psy5372 149 PVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT------PRYEDPRNKHGTRCAGELVMKPNNS 222 (586)
Q Consensus 149 ~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~HGT~vAgiia~~~~n~ 222 (586)
++|+ .+++|+||+|+|||+|||.+||+|.++... .++....+..++. .....+..+|||||||||++..++.
T Consensus 1 ~aw~-~g~~G~gv~IaviDtGid~~Hp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gHGT~VAgiia~~~~~~ 78 (273)
T cd07485 1 AAWE-FGTGGPGIIVAVVDTGVDGTHPDLQGNGDG-DGYDPAVNGYNFVPNVGDIDNDVSVGGGHGTHVAGTIAAVNNNG 78 (273)
T ss_pred Cccc-cccCCCCcEEEEEeCCCCCCChhhccCCCC-CCcccccCCcccccccCCcCCCCCCCCCCHHHHHHHHHcccCCC
Confidence 4799 999999999999999999999999987222 1232222222111 1111167899999999999986554
Q ss_pred Cccee-------eecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHH
Q psy5372 223 KCGVG-------VCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGI 291 (586)
Q Consensus 223 ~g~~G-------VAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~ 291 (586)
+..| +||+|+|+.+++++. ....++++++++.. ++++|||||||..... .....+.++++++.
T Consensus 79 -~~~g~i~~~~gvap~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~-~g~~Vin~S~g~~~~~----~~~~~~~~a~~~~~ 152 (273)
T cd07485 79 -GGVGGIAGAGGVAPGVKIMSIQIFAGRYYVGDDAVAAAIVYAAD-NGAVILQNSWGGTGGG----IYSPLLKDAFDYFI 152 (273)
T ss_pred -cceeccccccccCCCCEEEEEEEECCCCCccHHHHHHHHHHHHH-cCCcEEEecCCCCCcc----ccCHHHHHHHHHHH
Confidence 3444 999999999999875 36778899999988 7999999999975421 12335778888887
Q ss_pred Hhc--cCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCC-ceEEec
Q psy5372 292 REG--RQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV-KIITTD 368 (586)
Q Consensus 292 ~~~--~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~-~i~st~ 368 (586)
+.. +..+|+++|+||||++.... . .|+..+++|+||+++..+.++.||++|+.+++.+ ||. .++++.
T Consensus 153 ~~~~~~~~~g~lvv~AaGN~g~~~~--~--~pa~~~~vi~V~a~~~~~~~~~~S~~g~~~~i~a------pG~~~i~~~~ 222 (273)
T cd07485 153 ENAGGSPLDGGIVVFSAGNSYTDEH--R--FPAAYPGVIAVAALDTNDNKASFSNYGRWVDIAA------PGVGTILSTV 222 (273)
T ss_pred HhcccccCCCeEEEEecCCCCCCCC--C--CcccCCCeEEEEeccCCCCcCccccCCCceEEEe------CCCCcccccc
Confidence 742 12249999999999987532 2 2778899999999999999999999999887754 666 666664
Q ss_pred CC-----CCeeeccCCCCchHHHHHHHHHHHHhhCCC-CCHHHHHHHHHhc
Q psy5372 369 VH-----NTCTCEHSGTSAAAPIAAGVLALALEANPN-MTWRDCQHILAWT 413 (586)
Q Consensus 369 ~~-----~~~~~~~~GTS~AaP~VAG~aALl~~~~p~-lt~~~v~~~L~~t 413 (586)
+. ...|..++|||||||+|||++|||++++|+ |+++|||++|++|
T Consensus 223 ~~~~~~~~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~~~~i~~~L~~T 273 (273)
T cd07485 223 PKLDGDGGGNYEYLSGTSMAAPHVSGVAALVLSKFPDVFTPEQIRKLLEES 273 (273)
T ss_pred ccccCCCCCCeEeeccHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhC
Confidence 43 356889999999999999999999999999 9999999999876
|
Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev |
| >cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=341.06 Aligned_cols=230 Identities=33% Similarity=0.420 Sum_probs=189.3
Q ss_pred cEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEcc
Q psy5372 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLL 240 (586)
Q Consensus 161 v~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~ 240 (586)
|+|||||+||+.+||+|+++.....++++...+..+. +..+|||||||||++..++..++.||||+|+|+++|++
T Consensus 1 V~VaviDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~~-----~~~~HGT~vAgiiag~~~~~~~~~Gvap~a~i~~~~~~ 75 (242)
T cd07498 1 VVVAIIDTGVDLNHPDLSGKPKLVPGWNFVSNNDPTS-----DIDGHGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRIA 75 (242)
T ss_pred CEEEEecCCCCCCChhhccCcCccCCccccCCCCCCC-----CCCCCHHHHHHHHHhccCCCceeEeECCCCEEEEEEEE
Confidence 7999999999999999999544444566655443211 78999999999999998778899999999999999998
Q ss_pred CCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCC
Q psy5372 241 DGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC 316 (586)
Q Consensus 241 ~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~ 316 (586)
+.. .+++.++++++.. ++++|||||||...... ....++++++++++.++|++||+||||++.....
T Consensus 76 ~~~~~~~~~~~~~ai~~a~~-~~~~Vin~S~g~~~~~~-------~~~~~~~~~~~~~~~~~gvliv~aaGN~g~~~~~- 146 (242)
T cd07498 76 DSLGYAYWSDIAQAITWAAD-NGADVISNSWGGSDSTE-------SISSAIDNAATYGRNGKGGVVLFAAGNSGRSVSS- 146 (242)
T ss_pred CCCCCccHHHHHHHHHHHHH-CCCeEEEeccCCCCCCc-------hHHHHHHHHHHHHhhcCCeEEEEecCCCCCccCC-
Confidence 643 6778889999886 88999999999754322 3456666666666666899999999999985322
Q ss_pred CCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEec--------CCCCeeeccCCCCchHHHHH
Q psy5372 317 AADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTD--------VHNTCTCEHSGTSAAAPIAA 388 (586)
Q Consensus 317 ~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~--------~~~~~~~~~~GTS~AaP~VA 388 (586)
.|+..+++|+|||++..+.++.||++|+.+++.+ ||..+.+.. ..+.+|..++|||||||+||
T Consensus 147 ---~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~a------pG~~~~~~~~~~~~~~~~~~~~~~~~~GTS~Aap~va 217 (242)
T cd07498 147 ---GYAANPSVIAVAATDSNDARASYSNYGNYVDLVA------PGVGIWTTGTGRGSAGDYPGGGYGSFSGTSFASPVAA 217 (242)
T ss_pred ---CCcCCCCeEEEEEeCCCCCccCcCCCCCCeEEEe------CcCCcccCCccccccccCCCCceEeeCcHHHHHHHHH
Confidence 5778899999999999999999999999988855 555554441 23566888999999999999
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhc
Q psy5372 389 GVLALALEANPNMTWRDCQHILAWT 413 (586)
Q Consensus 389 G~aALl~~~~p~lt~~~v~~~L~~t 413 (586)
|++|||++++|+|+++|||++|++|
T Consensus 218 G~~All~~~~p~l~~~~i~~~L~~t 242 (242)
T cd07498 218 GVAALILSANPNLTPAEVEDILTST 242 (242)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 9999999999999999999999875
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=347.50 Aligned_cols=232 Identities=28% Similarity=0.334 Sum_probs=187.6
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCC----------CCC----------------C-CCCCCCChHHHHH
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWD----------ITP----------------R-YEDPRNKHGTRCA 212 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~----------~~~----------------~-~~~d~~~HGT~vA 212 (586)
||+||||||||+.+||+|.+++.. +|+|..+... +.. . ...+..+||||||
T Consensus 1 gV~VaviDtGi~~~Hp~l~~~~~~--g~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~HGT~vA 78 (285)
T cd07496 1 GVVVAVLDTGVLFHHPDLAGVLLP--GYDFISDPAIANDGDGRDSDPTDPGDWVTGDDVPPGGFCGSGVSPSSWHGTHVA 78 (285)
T ss_pred CCEEEEecCCCCCCCcchhhcccc--CcccccCcccccCCCCCCCCCCCcccccccccccccccccCCCCCCCCCHHHHH
Confidence 799999999999999999998754 4666543210 100 0 0014678999999
Q ss_pred HHHhccCCCCCcceeeecCcEEEEEEccCC---CchhHHHHHHhhhc---------CCCCeEEEcCCCCCCCCCCCCCch
Q psy5372 213 GELVMKPNNSKCGVGVCYGARVGGVKLLDG---ETTDLIESKALQFG---------LDKVDIYSGSWGPPDDGKSMDGPG 280 (586)
Q Consensus 213 giia~~~~n~~g~~GVAp~a~l~~~~v~~~---~~~~~~~a~~~~~~---------~~~~~Vin~S~G~~~~~~~~~~~~ 280 (586)
|||++..+|+.++.||||+|+|+++|+++. ..++++++++|+.. .++++|||||||..... .
T Consensus 79 giiaa~~~~~~~~~GvAp~a~i~~~~v~~~~~~~~~~i~~a~~~a~~~~~~~~~~~~~~~~Iin~S~G~~~~~------~ 152 (285)
T cd07496 79 GTIAAVTNNGVGVAGVAWGARILPVRVLGKCGGTLSDIVDGMRWAAGLPVPGVPVNPNPAKVINLSLGGDGAC------S 152 (285)
T ss_pred HHHhCcCCCCCCceeecCCCeEEEEEEecCCCCcHHHHHHHHHHHhccCcCCCcccCCCCeEEEeCCCCCCCC------C
Confidence 999999888999999999999999999864 36788999998863 36799999999985421 3
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCC
Q psy5372 281 KLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD 360 (586)
Q Consensus 281 ~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~ap 360 (586)
..+.++++++.. +|++||+||||++... ....|+..+++|+|||++..+.++.||++|+.+++.+ |
T Consensus 153 ~~~~~ai~~a~~-----~GvivV~AAGN~g~~~---~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~vdi~a------p 218 (285)
T cd07496 153 ATMQNAINDVRA-----RGVLVVVAAGNEGSSA---SVDAPANCRGVIAVGATDLRGQRASYSNYGPAVDVSA------P 218 (285)
T ss_pred HHHHHHHHHHHH-----CCCEEEEECCCCCCCC---CccCCCCCCceEEEeccCCCCCcccccCCCCCCCEEe------C
Confidence 367788888876 6999999999998752 3456788899999999999999999999999887754 5
Q ss_pred CCceEEecC--------------CCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q psy5372 361 PVKIITTDV--------------HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWT 413 (586)
Q Consensus 361 g~~i~st~~--------------~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t 413 (586)
|..|.++.. ....|..++|||||||+|||++|||++++|+|+++||+++|+.|
T Consensus 219 G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAlv~~~~p~lt~~~v~~~L~~t 285 (285)
T cd07496 219 GGDCASDVNGDGYPDSNTGTTSPGGSTYGFLQGTSMAAPHVAGVAALMKSVNPSLTPAQIESLLQST 285 (285)
T ss_pred CCCccccCCCCccccccccccCCCCCceEeeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 655554432 13457889999999999999999999999999999999999875
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=341.07 Aligned_cols=243 Identities=24% Similarity=0.292 Sum_probs=197.8
Q ss_pred CCCcEEEEEecCccCCCcccccCCCCCCcccccC-CCCCCCCCCCCCCCChHHHHHHHHhccCCC-CCcceeeecCcEEE
Q psy5372 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNA-EKWDITPRYEDPRNKHGTRCAGELVMKPNN-SKCGVGVCYGARVG 235 (586)
Q Consensus 158 G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~HGT~vAgiia~~~~n-~~g~~GVAp~a~l~ 235 (586)
|+||+|+|||+||+.+||+|.+++.....+.... ..... .|..+|||||||+|++..++ ..+..||||+|+|+
T Consensus 1 G~gv~VaviDsGv~~~h~~l~~~~~~~~~~~~~~~~~~~~-----~d~~~HGT~vAgiiag~~~~~~~~~~Giap~a~i~ 75 (264)
T cd07487 1 GKGITVAVLDTGIDAPHPDFDGRIIRFADFVNTVNGRTTP-----YDDNGHGTHVAGIIAGSGRASNGKYKGVAPGANLV 75 (264)
T ss_pred CCCcEEEEEeCCCCCCCccccccccccccccccccCCCCC-----CCCCCchHHHHHHHhcCCcccCCceEEECCCCeEE
Confidence 8999999999999999999998765533222111 11111 16789999999999999766 56789999999999
Q ss_pred EEEccCC----CchhHHHHHHhhhcCC---CCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCC
Q psy5372 236 GVKLLDG----ETTDLIESKALQFGLD---KVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGN 308 (586)
Q Consensus 236 ~~~v~~~----~~~~~~~a~~~~~~~~---~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN 308 (586)
.+|+++. ..++++++++|+.... +++|||||||..... ......+.++++++.+ +|++||+||||
T Consensus 76 ~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~Iin~S~g~~~~~---~~~~~~~~~~~~~~~~-----~gilvv~aaGN 147 (264)
T cd07487 76 GVKVLDDSGSGSESDIIAGIDWVVENNEKYNIRVVNLSLGAPPDP---SYGEDPLCQAVERLWD-----AGIVVVVAAGN 147 (264)
T ss_pred EEEeecCCCCccHHHHHHHHHHHHhhccccCceEEEeccCCCCCC---CCCCCHHHHHHHHHHh-----CCCEEEEeCCC
Confidence 9999874 3678889999988742 899999999986532 1122356777887776 69999999999
Q ss_pred CCCCCCCCCCCCCCCCceEEEEeeecCCCC----CCCCCCCCCcceeccccCCCCCCCceEEe--------cCCCCeeec
Q psy5372 309 GKYNGDNCAADGYINSIYTIAIASAREDGQ----SPFYSEECTGLIATAYSGGISDPVKIITT--------DVHNTCTCE 376 (586)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~----~a~~S~~G~~~~~~~~~~~~apg~~i~st--------~~~~~~~~~ 376 (586)
++.... .+..|+..+++|+|||++.++. ++.||++|+.......++..+||..+++. ......+..
T Consensus 148 ~~~~~~--~~~~p~~~~~vi~Vga~~~~~~~~~~~~~~s~~G~~~~~~~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~ 225 (264)
T cd07487 148 SGPGPG--TITSPGNSPKVITVGAVDDNGPHDDGISYFSSRGPTGDGRIKPDVVAPGENIVSCRSPGGNPGAGVGSGYFE 225 (264)
T ss_pred CCCCCC--ccCCcccCCCceEEEeccCCCCCCccccccccCCCCCCCCcCCCEEccccceEeccccccccCCCCCCceEe
Confidence 987532 3456778899999999999988 79999999987766667778899999986 334567889
Q ss_pred cCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 377 HSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 377 ~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
++|||||||+|||++|||++++|.|+++|||++|++||+
T Consensus 226 ~~GTS~Aap~vaG~~All~~~~p~~~~~~ik~~L~~tA~ 264 (264)
T cd07487 226 MSGTSMATPHVSGAIALLLQANPILTPDEVKCILRDTAT 264 (264)
T ss_pred ccccchHHHHHHHHHHHHHHHCcCCCHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >KOG1153|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=341.47 Aligned_cols=342 Identities=20% Similarity=0.221 Sum_probs=258.7
Q ss_pred cceeeeeEEEEEcCCcchHH-----HHHH-HhCCeEe-----------------eecCCCCCeEEEEEcCCCCCCCCccc
Q psy5372 8 AEHFLNQWVVHISGDPDIAN-----QVAQ-DLGFHYN-----------------GIINGLDNHYLFSKKQHNHKTPEETT 64 (586)
Q Consensus 8 ~~~~~~~~iV~~~~~~~~~~-----~~~~-~~g~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (586)
.+.++++|||.|++...+.+ +..+ -++.++. ..+..+.+.|.+.-...+++....+.
T Consensus 76 ~~~~~~~YiV~f~~~~~q~~~s~~~~~~~~~h~~s~~~~s~~~~f~~~d~~~s~~~~~~i~~~f~i~~~~~~~y~~~ft~ 155 (501)
T KOG1153|consen 76 EEALPSRYIVVFKPDASQQKISAHNRWVQQSHEVSSGKLSSEDAFYVKDTSDSKSTFGGIKNVFDIGGRVFRGYTGYFTG 155 (501)
T ss_pred hcccccceEEEeCCCccHHHHHhhhHHHHHHhhhhhccccccceeEeeccccchhhhcccccccccccchhhcccccccc
Confidence 36789999999997653321 1111 1122111 11122334444444445556667788
Q ss_pred cccccccCCCceeEEeecchhhccccchhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCC
Q psy5372 65 FETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLD 144 (586)
Q Consensus 65 ~~~~~l~~~p~V~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~ 144 (586)
+.+..++++|-+..+|++..++..+...+.. | ++-| |+|.+.+..... ..+
T Consensus 156 ~~v~~i~~~p~~~~ve~~~~v~~~~~~~i~~---Q--------------------~~AP-----wgLaRvsh~~~~-~y~ 206 (501)
T KOG1153|consen 156 ESVCSIRSDPLIKAVEKDSVVEVDKISTIML---Q--------------------NNAP-----WGLARVSHREKL-KYD 206 (501)
T ss_pred ceeeeeccCcceeecccccccccccccceec---c--------------------cCCc-----hhhhhhcccccc-ccc
Confidence 8999999999999999999998876432111 1 3444 999888764322 122
Q ss_pred CCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCc
Q psy5372 145 LNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKC 224 (586)
Q Consensus 145 i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g 224 (586)
--....++ -..|+||+.+|+||||+..||||.++... +.++..++.+- |++||||||||+|+++.
T Consensus 207 ~~~~Y~Y~--~~aG~gvtaYv~DTGVni~H~dFegRa~w--Ga~i~~~~~~~------D~nGHGTH~AG~I~sKt----- 271 (501)
T KOG1153|consen 207 SWGNYVYE--IDAGKGVTAYVLDTGVNIEHPDFEGRAIW--GATIPPKDGDE------DCNGHGTHVAGLIGSKT----- 271 (501)
T ss_pred chheEEee--cccCCCeEEEEecccccccccccccceec--ccccCCCCccc------ccCCCcceeeeeeeccc-----
Confidence 22334455 33799999999999999999999987433 44444333221 89999999999999985
Q ss_pred ceeeecCcEEEEEEccCCC----chhHHHHHHhhhcC--------CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHH
Q psy5372 225 GVGVCYGARVGGVKLLDGE----TTDLIESKALQFGL--------DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIR 292 (586)
Q Consensus 225 ~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~--------~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~ 292 (586)
.|||.+++|+.+||++++ .++++.++++..+. .+..|.|||+|+.. +..+.-|++.|++
T Consensus 272 -~GvAK~s~lvaVKVl~~dGsGt~Sdvi~GvE~~~k~h~~~k~~~~k~sv~NlSlGg~~--------S~aLn~AV~~A~~ 342 (501)
T KOG1153|consen 272 -FGVAKNSNLVAVKVLRSDGSGTVSDVIKGVEFVVKHHEKKKKKEGKKSVANLSLGGFR--------SAALNMAVNAASE 342 (501)
T ss_pred -cccccccceEEEEEeccCCcEeHHHHHhHHHHHHHHhhhhhcccCCCeEEEEecCCcc--------cHHHHHHHHHHhh
Confidence 899999999999999753 89999999999876 46889999999853 2367888898888
Q ss_pred hccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCC-
Q psy5372 293 EGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHN- 371 (586)
Q Consensus 293 ~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~- 371 (586)
.|++|++||||+.. |.|+ .+|+++..+|+|||++..+.++.|||+|+++++. |||..|+|++..+
T Consensus 343 -----~Gi~fa~AAGNe~e--DAC~-~SPass~~aITVGAst~~D~iA~FSN~G~CVdiF------APGv~IlSs~iGs~ 408 (501)
T KOG1153|consen 343 -----RGIHFAVAAGNEHE--DACN-SSPASSKKAITVGASTKNDTIAFFSNWGKCVDIF------APGVNILSSWIGSN 408 (501)
T ss_pred -----cCeEEEEcCCCcch--hhhc-cCcccccccEEecccccccchhhhcCccceeeee------cCchhhhhhhhcCc
Confidence 69999999999988 5676 4678899999999999999999999999999984 4999999997653
Q ss_pred CeeeccCCCCchHHHHHHHHHHHHhhCC---------CCCHHHHHHHHHhcCCc
Q psy5372 372 TCTCEHSGTSAAAPIAAGVLALALEANP---------NMTWRDCQHILAWTSER 416 (586)
Q Consensus 372 ~~~~~~~GTS~AaP~VAG~aALl~~~~p---------~lt~~~v~~~L~~tA~~ 416 (586)
......+|||||+|||||++|..++..| ..++.+++..++.-..+
T Consensus 409 ~at~ilSGTSMasPhvaG~aAy~ls~~~~~~~~f~n~~~s~~~lk~~~l~~~~~ 462 (501)
T KOG1153|consen 409 NATAILSGTSMASPHVAGLAAYFLSLGPLPDSSFANDAGSPSELKKRLLKFKTQ 462 (501)
T ss_pred cchheeecccccCcchhhhHHHhhhcCCCChHHhhhccCChHHhhhhhhccccc
Confidence 3567889999999999999999999988 34888888887766654
|
|
| >cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=331.06 Aligned_cols=237 Identities=21% Similarity=0.241 Sum_probs=184.7
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEc
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v 239 (586)
||+|||||+||+.+||+|.+++.....++ .+...+.+. ..+..+|||||||+|++..++ .+..||||+++|+++|+
T Consensus 1 GV~VaviDsGv~~~hp~l~~~~~~~~~~~--~~~~~~~~~-~~d~~~HGT~vAgiia~~~~~-~~~~GvAp~a~i~~~~v 76 (254)
T cd07490 1 GVTVAVLDTGVDADHPDLAGRVAQWADFD--ENRRISATE-VFDAGGHGTHVSGTIGGGGAK-GVYIGVAPEADLLHGKV 76 (254)
T ss_pred CCEEEEEeCCCCCCCcchhcccCCceecc--CCCCCCCCC-CCCCCCcHHHHHHHHhcCCCC-CCEEEECCCCEEEEEEE
Confidence 79999999999999999998775533332 211111111 117789999999999998664 45689999999999999
Q ss_pred cCCC---chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCC
Q psy5372 240 LDGE---TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC 316 (586)
Q Consensus 240 ~~~~---~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~ 316 (586)
++.. ..+++++++|+.. ++++|||||||..... ...+.++++...+. +|++||+||||++..
T Consensus 77 ~~~~~~~~~~~~~ai~~a~~-~~~~Vin~S~g~~~~~------~~~~~~~~~~~~~~----~g~lvV~aAGN~g~~---- 141 (254)
T cd07490 77 LDDGGGSLSQIIAGMEWAVE-KDADVVSMSLGGTYYS------EDPLEEAVEALSNQ----TGALFVVSAGNEGHG---- 141 (254)
T ss_pred ecCCCCcHHHHHHHHHHHHh-CCCCEEEECCCcCCCC------CcHHHHHHHHHHHc----CCCEEEEeCCCCCCC----
Confidence 8744 7888999999988 8999999999986432 12345555544442 699999999999875
Q ss_pred CCCCCCCCceEEEEeeecCCCCCCCCCCCCCccee-----------ccccCCCCCCCceEEe---cCCCCeeeccCCCCc
Q psy5372 317 AADGYINSIYTIAIASAREDGQSPFYSEECTGLIA-----------TAYSGGISDPVKIITT---DVHNTCTCEHSGTSA 382 (586)
Q Consensus 317 ~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~-----------~~~~~~~apg~~i~st---~~~~~~~~~~~GTS~ 382 (586)
....|+..+++|+|||++..+.+.+|+++|..... ...++..+||..++++ ......|..++||||
T Consensus 142 ~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~d~~apG~~i~~~~~~~~~~~~~~~~~GTS~ 221 (254)
T cd07490 142 TSGSPGSAYAALSVGAVDRDDEDAWFSSFGSSGASLVSAPDSPPDEYTKPDVAAPGVDVYSARQGANGDGQYTRLSGTSM 221 (254)
T ss_pred CCCCCccCCceeEEecccccCCccCccCCcccccccccCCCCCccCCcCceEEeccCCeEccccCCCCCCCeeecccHHH
Confidence 33557788999999999999999999988832211 1122335688888873 134566889999999
Q ss_pred hHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 383 AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
|||+|||++|||++++|+|+++|||++|+.||+
T Consensus 222 AaP~vaG~aAl~~~~~p~~~~~~i~~~L~~tA~ 254 (254)
T cd07490 222 AAPHVAGVAALLAAAHPDLSPEQIKDALTETAY 254 (254)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999984
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=329.73 Aligned_cols=232 Identities=28% Similarity=0.369 Sum_probs=188.8
Q ss_pred CCcEEEEEecCccCCCcccccCCCCC--------------------CcccccCCCCCCCCCCCCCCCChHHHHHHHHhcc
Q psy5372 159 AGVNIIIIDDGMEYTHEDIKDSFAPE--------------------LSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMK 218 (586)
Q Consensus 159 ~gv~VaViDtGid~~Hpdl~~~~~~~--------------------~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~ 218 (586)
+||+|+|||+||+++||+|.+++... .+|++.....++ .|..+|||||||+|++.
T Consensus 2 ~~v~V~iiDtGid~~h~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~HGT~va~ii~~~ 76 (259)
T cd07473 2 GDVVVAVIDTGVDYNHPDLKDNMWVNPGEIPGNGIDDDGNGYVDDIYGWNFVNNDNDP-----MDDNGHGTHVAGIIGAV 76 (259)
T ss_pred CCCEEEEEeCCCCCCChhhccccccCcccccccCcccCCCCcccCCCcccccCCCCCC-----CCCCCcHHHHHHHHHCc
Confidence 68999999999999999999865321 112222111111 17789999999999999
Q ss_pred CCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhc
Q psy5372 219 PNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREG 294 (586)
Q Consensus 219 ~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~ 294 (586)
.+++.++.||||+|+|+.+|+++.. ..+++++++++.. ++++|||+|||.... ...+.++++++..
T Consensus 77 ~~~~~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~a~~~a~~-~~~~vin~S~G~~~~-------~~~~~~~~~~~~~-- 146 (259)
T cd07473 77 GNNGIGIAGVAWNVKIMPLKFLGADGSGTTSDAIKAIDYAVD-MGAKIINNSWGGGGP-------SQALRDAIARAID-- 146 (259)
T ss_pred CCCCCceEEeCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHH-CCCeEEEeCCCCCCC-------CHHHHHHHHHHHh--
Confidence 8888889999999999999998643 6788999999988 899999999998643 3467888888887
Q ss_pred cCCCCcEEEEecCCCCCCCCC-CCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcc-eeccccCCCCCCCceEEecCCCC
Q psy5372 295 RQGKGVLFVFAAGNGKYNGDN-CAADGYINSIYTIAIASAREDGQSPFYSEECTGL-IATAYSGGISDPVKIITTDVHNT 372 (586)
Q Consensus 295 ~~~~Gi~~V~AAGN~g~~~~~-~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~-~~~~~~~~~apg~~i~st~~~~~ 372 (586)
+|++||+||||++..... ..++.....+++|+||+++..+.+..||++|+.. ++ .+||..++++. ...
T Consensus 147 ---~g~ivV~aaGN~g~~~~~~~~~p~~~~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~------~apG~~~~~~~-~~~ 216 (259)
T cd07473 147 ---AGILFVAAAGNDGTNNDKTPTYPASYDLDNIISVAATDSNDALASFSNYGKKTVDL------AAPGVDILSTS-PGG 216 (259)
T ss_pred ---CCCEEEEeCCCCCCCCCCCcCcCcccCCCCeEEEEecCCCCCcCcccCCCCCCcEE------EeccCCeEecc-CCC
Confidence 599999999999875331 1222222457899999999999999999999753 33 45888888874 566
Q ss_pred eeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 373 CTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 373 ~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
.|..++|||||||+|||++|||++++|.|+++|||++|++||+
T Consensus 217 ~~~~~~GTS~AaP~vaG~~All~~~~~~~t~~~v~~~L~~tA~ 259 (259)
T cd07473 217 GYGYMSGTSMATPHVAGAAALLLSLNPNLTAAQIKDAILSSAD 259 (259)
T ss_pred cEEEeccHhHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Confidence 7899999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=334.45 Aligned_cols=246 Identities=26% Similarity=0.276 Sum_probs=179.2
Q ss_pred CCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccC-CCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCC
Q psy5372 143 LDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS-FAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNN 221 (586)
Q Consensus 143 ~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n 221 (586)
..|++.++|+ ++++|+||+||||||||+..|| |..+ +.. ...+..+..++. .|..|||||||++|
T Consensus 6 ~~l~~~~~~~-~G~~G~Gv~VaViDTGv~~~h~-~~~~~~~~--~~~~~~~~~~~~----~D~~gHGT~vag~i------ 71 (298)
T cd07494 6 ALLNATRVHQ-RGITGRGVRVAMVDTGFYAHPF-FESRGYQV--RVVLAPGATDPA----CDENGHGTGESANL------ 71 (298)
T ss_pred hhcChhHHHh-cCCCCCCcEEEEEeCCCcCCch-hhcCCccc--eeecCCCCCCCC----CCCCCcchheeece------
Confidence 3578999999 9999999999999999999998 5442 211 111111111111 17789999999854
Q ss_pred CCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCC------CCCchHHHHHHHHHHHHhcc
Q psy5372 222 SKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKS------MDGPGKLSKAAIDRGIREGR 295 (586)
Q Consensus 222 ~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~------~~~~~~~~~~a~~~a~~~~~ 295 (586)
.||||+|+|+.+|+++....+++++++|++. ++++|||||||....... .......+.++++++..
T Consensus 72 ----~GvAP~a~i~~vkv~~~~~~~~~~ai~~a~~-~g~dVIn~SlG~~~~~~~~~~~~~~~~~~~al~~ai~~A~~--- 143 (298)
T cd07494 72 ----FAIAPGAQFIGVKLGGPDLVNSVGAFKKAIS-LSPDIISNSWGYDLRSPGTSWSRSLPNALKALAATLQDAVA--- 143 (298)
T ss_pred ----eEeCCCCeEEEEEccCCCcHHHHHHHHHHHh-cCCCEEEeecccCCCCcccccccccchhhHHHHHHHHHHHH---
Confidence 6899999999999998888889999999988 899999999998542211 11122345666666665
Q ss_pred CCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeec--CCCCC--CCCC-CCCCcc-------eecccc--------
Q psy5372 296 QGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR--EDGQS--PFYS-EECTGL-------IATAYS-------- 355 (586)
Q Consensus 296 ~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~--~~~~~--a~~S-~~G~~~-------~~~~~~-------- 355 (586)
+|++||+||||++. ..|+..++||+|||++ .++.. +.|+ ++.+.+ +++...
T Consensus 144 --~Gi~vVaAAGN~~~-------~~Pa~~p~viaVga~~~~~~g~~~~~~~~~~~~s~~~~g~~~pd~~~~~g~~~~~~~ 214 (298)
T cd07494 144 --RGIVVVFSAGNGGW-------SFPAQHPEVIAAGGVFVDEDGARRASSYASGFRSKIYPGRQVPDVCGLVGMLPHAAY 214 (298)
T ss_pred --CCcEEEEeCCCCCC-------CcCCCCCCEEEEEeEeccCCCcccccccccCcccccCCCCccCccccccCcCCcccc
Confidence 79999999999874 3478899999999984 34432 2221 122111 111110
Q ss_pred -C-CCCCCCceEEec-------CCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCC
Q psy5372 356 -G-GISDPVKIITTD-------VHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419 (586)
Q Consensus 356 -~-~~apg~~i~st~-------~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 419 (586)
. ..+||..|.+.. ..+..|..++|||||||||||++|||++++|.|+++|||++|+.||++...
T Consensus 215 ~~~~~APG~~i~~~~~~~~~~~~~~~~y~~~sGTS~Aap~vaG~aAll~~~~p~~~~~~v~~~l~~ta~~~~~ 287 (298)
T cd07494 215 LMLPVPPGSQLDRSCAAFPDGTPPNDGWGVFSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTARDVTK 287 (298)
T ss_pred cccccCCCcceeccccCCCCCCCCCCCeEeeccchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccCC
Confidence 0 036888775321 235668899999999999999999999999999999999999999997754
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=321.68 Aligned_cols=225 Identities=29% Similarity=0.377 Sum_probs=187.5
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEc
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v 239 (586)
||+|+|||+||+.+||+|++++.. .+++.....+ .. .+..+|||||||+|++.. +..++.||||+|+|+.+|+
T Consensus 1 gv~V~iiDsGv~~~h~~l~~~~~~--~~~~~~~~~~---~~-~~~~~HGT~vA~ii~~~~-~~~~~~giap~a~i~~~~~ 73 (229)
T cd07477 1 GVKVAVIDTGIDSSHPDLKLNIVG--GANFTGDDNN---DY-QDGNGHGTHVAGIIAALD-NGVGVVGVAPEADLYAVKV 73 (229)
T ss_pred CCEEEEEcCCCCCCChhHhccccC--cccccCCCCC---CC-CCCCCCHHHHHHHHhccc-CCCccEeeCCCCEEEEEEE
Confidence 799999999999999999987655 3455544321 11 178899999999999984 4448899999999999999
Q ss_pred cCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC
Q psy5372 240 LDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN 315 (586)
Q Consensus 240 ~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~ 315 (586)
++.. ..+++.+++++.. ++++|||||||.... ...+.++++++.. +|+++|+||||++.....
T Consensus 74 ~~~~~~~~~~~l~~ai~~a~~-~~~~Vin~S~g~~~~-------~~~~~~~~~~a~~-----~giliv~aaGN~~~~~~~ 140 (229)
T cd07477 74 LNDDGSGTYSDIIAGIEWAIE-NGMDIINMSLGGPSD-------SPALREAIKKAYA-----AGILVVAAAGNSGNGDSS 140 (229)
T ss_pred ECCCCCcCHHHHHHHHHHHHH-CCCCEEEECCccCCC-------CHHHHHHHHHHHH-----CCCEEEEecCCCCCCCCC
Confidence 8643 5788999999988 789999999997542 2367788888777 699999999999885332
Q ss_pred CCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHH
Q psy5372 316 CAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALAL 395 (586)
Q Consensus 316 ~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~ 395 (586)
. ..|+..+++|+||+++.++.+..||++|+.+++. +||..++++. ....+..++|||||||+|||++|||+
T Consensus 141 ~--~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~------apg~~i~~~~-~~~~~~~~~GTS~Aap~vag~~All~ 211 (229)
T cd07477 141 Y--DYPAKYPSVIAVGAVDSNNNRASFSSTGPEVELA------APGVDILSTY-PNNDYAYLSGTSMATPHVAGVAALVW 211 (229)
T ss_pred c--cCCCCCCCEEEEEeecCCCCcCCccCCCCCceEE------eCCCCeEEec-CCCCEEEEccHHHHHHHHHHHHHHHH
Confidence 2 2577889999999999999999999999988774 4888898885 44667889999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhc
Q psy5372 396 EANPNMTWRDCQHILAWT 413 (586)
Q Consensus 396 ~~~p~lt~~~v~~~L~~t 413 (586)
+++|+|++++||++|+.|
T Consensus 212 ~~~~~~~~~~i~~~l~~t 229 (229)
T cd07477 212 SKRPELTNAQVRQALNKT 229 (229)
T ss_pred HhCCCCCHHHHHHHHHhC
Confidence 999999999999999875
|
This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug |
| >cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=336.94 Aligned_cols=233 Identities=21% Similarity=0.145 Sum_probs=173.8
Q ss_pred HHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCc-------------------------ccccCCCCC------CCC
Q psy5372 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELS-------------------------YNFNAEKWD------ITP 198 (586)
Q Consensus 150 aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~-------------------------~~~~~~~~~------~~~ 198 (586)
+|. .+++|+||+|||||||||++||+|.+....... +++.++..+ +..
T Consensus 22 ~~~-~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~ 100 (307)
T cd04852 22 LLG-AANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSCNNKLIGARYFSDGYDAYGGFNSDGE 100 (307)
T ss_pred ccc-ccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCcCCeEEEEEEcccchhhccCcccccC
Confidence 344 699999999999999999999999764221110 111111100 000
Q ss_pred CCCC-CCCChHHHHHHHHhccCCCC--------CcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEc
Q psy5372 199 RYED-PRNKHGTRCAGELVMKPNNS--------KCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSG 265 (586)
Q Consensus 199 ~~~~-d~~~HGT~vAgiia~~~~n~--------~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~ 265 (586)
...+ |..+|||||||||+|...++ ..+.||||+|+|+++|+++. ..++++++++++.. ++++||||
T Consensus 101 ~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~ai~~a~~-~g~~Vin~ 179 (307)
T cd04852 101 YRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIA-DGVDVISY 179 (307)
T ss_pred CCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCCCCccHHHHHHHHHHHHH-cCCCEEEe
Confidence 1111 77899999999999975532 34689999999999999875 37788999999987 79999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCC
Q psy5372 266 SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEE 345 (586)
Q Consensus 266 S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~ 345 (586)
|||.... ......+..++.++.. +|+++|+||||+|.. ....+...+++|+||+++
T Consensus 180 S~G~~~~----~~~~~~~~~~~~~a~~-----~gilvV~aAGN~g~~----~~~~~~~~~~vi~Vga~~----------- 235 (307)
T cd04852 180 SIGGGSP----DPYEDPIAIAFLHAVE-----AGIFVAASAGNSGPG----ASTVPNVAPWVTTVAAST----------- 235 (307)
T ss_pred CCCCCCC----CcccCHHHHHHHHHHh-----CCCEEEEECCCCCCC----CCcccCCCCCeEEEEecc-----------
Confidence 9998642 1112245566666654 799999999999853 234566788999999998
Q ss_pred CCcceeccccCCCCCCCceEEecC---------CCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 346 CTGLIATAYSGGISDPVKIITTDV---------HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 346 G~~~~~~~~~~~~apg~~i~st~~---------~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
..++..+||..|++... ....|..++|||||||+|||++|||+|++|+++++|||++|++||+
T Consensus 236 -------~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aALl~~~~p~~t~~~v~~~L~~tA~ 307 (307)
T cd04852 236 -------LKPDIAAPGVDILAAWTPEGADPGDARGEDFAFISGTSMASPHVAGVAALLKSAHPDWSPAAIKSALMTTAY 307 (307)
T ss_pred -------CccceeeccCceeecccCccccccCCCCCcEEEeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 11222457777776643 2356888999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=334.06 Aligned_cols=241 Identities=18% Similarity=0.139 Sum_probs=183.7
Q ss_pred EEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccC
Q psy5372 162 NIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD 241 (586)
Q Consensus 162 ~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~ 241 (586)
+||||||||+.+||+|++++.....+...... + .|..+|||||||+|++..++..+..|+||+|+|+.+|+++
T Consensus 2 ~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~~--~-----~d~~gHGT~vAgiia~~~~~~~~~~gvap~~~l~~~kv~~ 74 (291)
T cd04847 2 IVCVLDSGINRGHPLLAPALAEDDLDSDEPGW--T-----ADDLGHGTAVAGLALYGDLTLPGNGLPRPGCRLESVRVLP 74 (291)
T ss_pred EEEEecCCCCCCChhhhhhhccccccccCCCC--c-----CCCCCChHHHHHHHHcCcccCCCCCCcccceEEEEEEEcC
Confidence 79999999999999999987654333222111 1 1789999999999998766556789999999999999986
Q ss_pred CC--------chhHHHHHHhhhcCC--CCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCC
Q psy5372 242 GE--------TTDLIESKALQFGLD--KVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKY 311 (586)
Q Consensus 242 ~~--------~~~~~~a~~~~~~~~--~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~ 311 (586)
.. ..++++++++++... +++|||||||...... ......+..++++... .+|++||+||||++.
T Consensus 75 ~~g~~~~~~~~~~~~~ai~~a~~~~~~~~~ViN~SlG~~~~~~--~~~~~~~~~~id~~a~----~~gvlvV~aAGN~g~ 148 (291)
T cd04847 75 PNGENDPELYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPID--DGRPSSWAAALDQLAA----EYDVLFVVSAGNLGD 148 (291)
T ss_pred CCCCCCccChHHHHHHHHHHHHHhCCCceeEEEEecCCCCCcc--CCCCCcHHHHHHHHhc----cCCeEEEEECCCCCc
Confidence 42 456788999988643 3699999999864322 1111234555655433 279999999999998
Q ss_pred CCCCCCC--------CCCCCCceEEEEeeecCCCCCCCCCC--------------CCCcceeccccCCCCCCCceEEec-
Q psy5372 312 NGDNCAA--------DGYINSIYTIAIASAREDGQSPFYSE--------------ECTGLIATAYSGGISDPVKIITTD- 368 (586)
Q Consensus 312 ~~~~~~~--------~~~~~~~~vi~Vga~~~~~~~a~~S~--------------~G~~~~~~~~~~~~apg~~i~st~- 368 (586)
....... ..|+.++++|+|||++..+..+.||+ +||......+++..+||..+.+..
T Consensus 149 ~~~~~~~~~~~~~~i~~Pa~~~~vItVgA~~~~~~~~~~s~~~~~~~~~~~~fs~~Gp~~~~~~KPDl~apG~~i~~~~~ 228 (291)
T cd04847 149 DDAADGPPRIQDDEIEDPADSVNALTVGAITSDDDITDRARYSAVGPAPAGATTSSGPGSPGPIKPDVVAFGGNLAYDPS 228 (291)
T ss_pred cccccccccccccccCCHHHhhhheeeeeeecCccCCCcccccccccccCCCccccCCCCCCCcCCcEEeeCCceeecCC
Confidence 6443221 23677889999999999887766544 455555556677788998887642
Q ss_pred ----------------CCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 369 ----------------VHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 369 ----------------~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
..+..|..++|||||||+|||++|||++++|++++.+||++|++||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~Vag~aAll~~~~p~~t~~~ikalL~~sA~ 291 (291)
T cd04847 229 GNAADGDLSLLTTLSSPSGGGFVTVGGTSFAAPLAARLAAGLFAELPELSPETIRALLIHSAE 291 (291)
T ss_pred CCCccCcceeeecccCCCCCcccccccchHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 13456889999999999999999999999999999999999999984
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=334.81 Aligned_cols=250 Identities=23% Similarity=0.246 Sum_probs=190.6
Q ss_pred CCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCC---CCCCCCCCCCCChHHHHHHHHhccCCCCC---ccee
Q psy5372 154 LNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKW---DITPRYEDPRNKHGTRCAGELVMKPNNSK---CGVG 227 (586)
Q Consensus 154 ~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~HGT~vAgiia~~~~n~~---g~~G 227 (586)
++++|+||+|||||+||+.+||+|.+... .+.++..... .+......|..+|||||||+|++..++.. ++.|
T Consensus 2 ~g~tG~gv~VaviDtGi~~~hp~l~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~~~~~~~~~~G 79 (293)
T cd04842 2 LGLTGKGQIVGVADTGLDTNHCFFYDPNF--NKTNLFHRKIVRYDSLSDTKDDVDGHGTHVAGIIAGKGNDSSSISLYKG 79 (293)
T ss_pred CCcCCcCCEEEEEecCCCCCCCcccCCCc--CcCccCcccEEEeeccCCCCCCCCCCcchhheeeccCCcCCCccccccc
Confidence 68999999999999999999999976321 0111111100 00111111678999999999999987775 7899
Q ss_pred eecCcEEEEEEccCCC-----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEE
Q psy5372 228 VCYGARVGGVKLLDGE-----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302 (586)
Q Consensus 228 VAp~a~l~~~~v~~~~-----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~ 302 (586)
|||+|+|+.+++++.. ...+..+++++.. .+++|||||||..... .......+++++... .+|+++
T Consensus 80 vAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Vin~S~G~~~~~-----~~~~~~~~~~~~~~~---~~g~lv 150 (293)
T cd04842 80 VAPKAKLYFQDIGDTSGNLSSPPDLNKLFSPMYD-AGARISSNSWGSPVNN-----GYTLLARAYDQFAYN---NPDILF 150 (293)
T ss_pred ccccCeEEEEEeeccCccccCCccHHHHHHHHHH-hCCEEEeccCCCCCcc-----ccchHHHHHHHHHHh---CCCeEE
Confidence 9999999999998743 4556677777766 6799999999986532 112445566665543 169999
Q ss_pred EEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCC---------------CCCCCCCCCcceeccccCCCCCCCceEEe
Q psy5372 303 VFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQ---------------SPFYSEECTGLIATAYSGGISDPVKIITT 367 (586)
Q Consensus 303 V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~---------------~a~~S~~G~~~~~~~~~~~~apg~~i~st 367 (586)
|+||||++..... ....|+..+++|+|||++..+. ++.||++|+......+++..+||..++++
T Consensus 151 V~aAGN~g~~~~~-~~~~pa~~~~vi~Vga~~~~~~~~~~~~~~~~~~~~~~~~~S~~G~~~~~~~~pdv~ApG~~i~~~ 229 (293)
T cd04842 151 VFSAGNDGNDGSN-TIGSPATAKNVLTVGASNNPSVSNGEGGLGQSDNSDTVASFSSRGPTYDGRIKPDLVAPGTGILSA 229 (293)
T ss_pred EEeCCCCCCCCCc-cccCcccccceEEEeeccCCCcccccccccccCCCCccccccCcCCCCCCCcCCCEECCCCCeEec
Confidence 9999999986432 2456788899999999998877 88999999987666666677899999888
Q ss_pred c--------CCCCeeeccCCCCchHHHHHHHHHHHHhhCC--------CCCHHHHHHHHHhcCC
Q psy5372 368 D--------VHNTCTCEHSGTSAAAPIAAGVLALALEANP--------NMTWRDCQHILAWTSE 415 (586)
Q Consensus 368 ~--------~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p--------~lt~~~v~~~L~~tA~ 415 (586)
. .....|..++|||||||+|||++|||+|++| .+++.++|++|++||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~aAll~~~~~~~~~~~~~~~~~~~~ka~l~~sA~ 293 (293)
T cd04842 230 RSGGGGIGDTSDSAYTSKSGTSMATPLVAGAAALLRQYFVDGYYPTKFNPSAALLKALLINSAR 293 (293)
T ss_pred cCCCCCCCCCChhheeecCcHHHHHHHHHHHHHHHHHHHHhcCcCCCcCcCHHHHHHHHHhcCC
Confidence 4 2345688999999999999999999999855 5555699999999985
|
Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases |
| >cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=321.34 Aligned_cols=215 Identities=22% Similarity=0.255 Sum_probs=170.4
Q ss_pred CCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCC-CCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEE
Q psy5372 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWD-ITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGG 236 (586)
Q Consensus 158 G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~ 236 (586)
+++|+|||||+|||.+||||++++.....|....++.+ ..|.+. |..+|||||||||+ ||||+|+|++
T Consensus 2 ~~~V~VaVIDsGvd~~hpdl~~~i~~~~~~~~~~~~~~~~~~~~~-d~~gHGT~vAgiI~----------gvap~a~i~~ 70 (247)
T cd07491 2 LKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGDGNKVSPYYV-SADGHGTAMARMIC----------RICPSAKLYV 70 (247)
T ss_pred CCCCEEEEECCCcCCCchhhccccccCCCCCCCCCCcccCCCCCC-CCCCcHHHHHHHHH----------HHCCCCeEEE
Confidence 68999999999999999999998766444443322211 112121 68899999999996 5899999999
Q ss_pred EEccCCC----------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEec
Q psy5372 237 VKLLDGE----------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAA 306 (586)
Q Consensus 237 ~~v~~~~----------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AA 306 (586)
+|+++.. ...+++|++|++. ++++|||||||...... .......+.+++++|.+ +|+++|+||
T Consensus 71 ~kv~~~~~~~~~~~~~~~~~i~~Ai~~Ai~-~gadIIn~S~g~~~~~~-~~~~~~~l~~ai~~A~~-----~GilvvaaA 143 (247)
T cd07491 71 IKLEDRPSPDSNKRSITPQSAAKAIEAAVE-KKVDIISMSWTIKKPED-NDNDINELENAIKEALD-----RGILLFCSA 143 (247)
T ss_pred EEecccCCCCCcccccCHHHHHHHHHHHHH-CCCcEEEeeeecccccc-cccchHHHHHHHHHHHh-----CCeEEEEec
Confidence 9998642 3578999999998 79999999999754211 11223467788888877 799999999
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecC--CCCeeeccCCCCchH
Q psy5372 307 GNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDV--HNTCTCEHSGTSAAA 384 (586)
Q Consensus 307 GN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~--~~~~~~~~~GTS~Aa 384 (586)
||++.... ..++.|+..++||+|||++.++.++.||++|+.+++ .+||.+|+++.. .++.|..++||||||
T Consensus 144 GN~g~~~~-~~~~~pa~~~~Vi~VgA~~~~g~~~~~S~~g~~vd~------~APG~~i~s~~~~~~~~~~~~~sGTS~At 216 (247)
T cd07491 144 SDQGAFTG-DTYPPPAARDRIFRIGAADEDGGADAPVGDEDRVDY------ILPGENVEARDRPPLSNSFVTHTGSSVAT 216 (247)
T ss_pred CCCCCcCC-CcccCcccCCCeEEEEeeCCCCCCccccCCCCcceE------EeCCCceecCCcCCCCCCeeeeccHHHHH
Confidence 99998643 234556778999999999999999999999998877 458999998864 256688999999999
Q ss_pred HHHHHHHHHHHhh
Q psy5372 385 PIAAGVLALALEA 397 (586)
Q Consensus 385 P~VAG~aALl~~~ 397 (586)
|+|||++||||+.
T Consensus 217 p~vaGvaAL~l~~ 229 (247)
T cd07491 217 ALAAGLAALILYC 229 (247)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=330.35 Aligned_cols=242 Identities=23% Similarity=0.263 Sum_probs=170.1
Q ss_pred CCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcE
Q psy5372 154 LNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGAR 233 (586)
Q Consensus 154 ~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~ 233 (586)
.+++|+||+|+|||+||+.+||+|.++... ..++.+... + .|..+|||||||+|++..++ .+..||||+|+
T Consensus 3 ~~~tG~gv~VaVlDsGv~~~hp~l~~~~~~--~~~~~~~~~-~-----~d~~gHGT~VAgiiag~~~~-~~~~GvAp~a~ 73 (297)
T cd07480 3 SPFTGAGVRVAVLDTGIDLTHPAFAGRDIT--TKSFVGGED-V-----QDGHGHGTHCAGTIFGRDVP-GPRYGVARGAE 73 (297)
T ss_pred CCCCCCCCEEEEEcCCCCCCChhhcCCccc--CcccCCCCC-C-----CCCCCcHHHHHHHHhcccCC-CcccccCCCCE
Confidence 579999999999999999999999987543 344444322 1 17899999999999998666 34679999999
Q ss_pred EEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC--CchHHHHHHHHHHHHh--------------
Q psy5372 234 VGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD--GPGKLSKAAIDRGIRE-------------- 293 (586)
Q Consensus 234 l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~--~~~~~~~~a~~~a~~~-------------- 293 (586)
|+.++++.. ....+.++++|++. ++++|||||||....+.... .........++.+.+.
T Consensus 74 i~~~~~~~~~~~~~~~~i~~ai~~a~~-~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 152 (297)
T cd07480 74 IALIGKVLGDGGGGDGGILAGIQWAVA-NGADVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALMTLVAAQ 152 (297)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHH-cCCCEEEeccCCCCcccccccCCCCchhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 999999753 36678999999987 78999999999865222100 0011112222222111
Q ss_pred ccCCCCcEEEEecCCCCCCCCCCCCC-CCCCCceEEEEeeecCCCCCCCCCCC----CCcceeccccCCCCCCCceEEec
Q psy5372 294 GRQGKGVLFVFAAGNGKYNGDNCAAD-GYINSIYTIAIASAREDGQSPFYSEE----CTGLIATAYSGGISDPVKIITTD 368 (586)
Q Consensus 294 ~~~~~Gi~~V~AAGN~g~~~~~~~~~-~~~~~~~vi~Vga~~~~~~~a~~S~~----G~~~~~~~~~~~~apg~~i~st~ 368 (586)
.+..+|+++|+||||++.....+.+. .+...++++.|++++..+....+++. +...++ .+||..|+++.
T Consensus 153 ~~~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~~~~~~V~~V~~~~~~~~~~~~~~~~~~~~dv------~ApG~~i~s~~ 226 (297)
T cd07480 153 AALARGTLIVAAAGNESQRPAGIPPVGNPAACPSAMGVAAVGALGRTGNFSAVANFSNGEVDI------AAPGVDIVSAA 226 (297)
T ss_pred hhhcCCceEEEecCCCCCCCCCCCCccCccccccccEEEEECCCCCCCCccccCCCCCCceEE------EeCCCCeEeec
Confidence 12348999999999998753332221 12222344444444444443333332 222333 56999999885
Q ss_pred CCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q psy5372 369 VHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAW 412 (586)
Q Consensus 369 ~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~ 412 (586)
.++.|..++|||||||+|||++|||++++|++++++++++|+.
T Consensus 227 -~~~~~~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~l~~ 269 (297)
T cd07480 227 -PGGGYRSMSGTSMATPHVAGVAALWAEALPKAGGRALAALLQA 269 (297)
T ss_pred -CCCcEEEeCcHHHHHHHHHHHHHHHHHhCcccCHHHHHHHHHH
Confidence 5667899999999999999999999999999999999998884
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=345.43 Aligned_cols=267 Identities=23% Similarity=0.237 Sum_probs=201.8
Q ss_pred CCCCCcEEEEEecCccCCCcccccCC---CCCCcccccCC------------------------CCCCCCCC-CCCCCCh
Q psy5372 156 INGAGVNIIIIDDGMEYTHEDIKDSF---APELSYNFNAE------------------------KWDITPRY-EDPRNKH 207 (586)
Q Consensus 156 ~~G~gv~VaViDtGid~~Hpdl~~~~---~~~~~~~~~~~------------------------~~~~~~~~-~~d~~~H 207 (586)
++|+||+|||||||||+.||+|...- +....||.... ..+|.... ..|..||
T Consensus 1 ltG~GV~VaVIDtGId~~hp~F~~~dg~tRi~~~wDq~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~~D~~GH 80 (455)
T cd07478 1 LTGKGVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPPPGGYYGGGEYTEEIINAALASDNPYDIVPSRDENGH 80 (455)
T ss_pred CCCCceEEEEEECCCCCCCHHHccCCCCchhHHhhhCcCCCCCCCccccCceEEeHHHHHHHHhcCCccccCcCCCCCCc
Confidence 48999999999999999999998421 00011221111 11221111 1178999
Q ss_pred HHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC--------------chhHHHHHHhhhcC----CCCeEEEcCCCC
Q psy5372 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE--------------TTDLIESKALQFGL----DKVDIYSGSWGP 269 (586)
Q Consensus 208 GT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~--------------~~~~~~a~~~~~~~----~~~~Vin~S~G~ 269 (586)
||||||||||..+++.++.||||+|+|+++|+++.. .++++.|++|+... +...|||||||.
T Consensus 81 GThvAGIiag~~~~~~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~a~~~~~p~VInlSlG~ 160 (455)
T cd07478 81 GTHVAGIAAGNGDNNPDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDKALELNKPLVINISLGT 160 (455)
T ss_pred hHHHHHHHhcCCCCCCCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 999999999998888899999999999999998542 46889999987753 357899999997
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCC-----------------------------------
Q psy5372 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGD----------------------------------- 314 (586)
Q Consensus 270 ~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~----------------------------------- 314 (586)
..... ++ ...+.++++.+... +|+++|+||||++....
T Consensus 161 ~~g~~--~g-~~~l~~~i~~~~~~----~gv~vV~aaGNeg~~~~h~~~~~~~~~~~~~ie~~v~~~~~~~~~eiW~~~~ 233 (455)
T cd07478 161 NFGSH--DG-TSLLERYIDAISRL----RGIAVVVGAGNEGNTQHHHSGGIVPNGETKTVELNVGEGEKGFNLEIWGDFP 233 (455)
T ss_pred CCCCC--CC-ccHHHHHHHHHHhh----CCeEEEEeCCCCCCcCCceeeeeccCCceEEEEEEECCCCcceEEEEecCCC
Confidence 53221 11 22567777776663 59999999999997300
Q ss_pred --------------------------------------------------------------------------------
Q psy5372 315 -------------------------------------------------------------------------------- 314 (586)
Q Consensus 315 -------------------------------------------------------------------------------- 314 (586)
T Consensus 234 d~~~v~i~sP~Ge~~~~i~~~~~~~~~~~~~~~~t~i~v~y~~~~~~~g~~~i~i~~~~~~~GiW~i~~~~~~~~~g~~~ 313 (455)
T cd07478 234 DRFSVSIISPSGESSGRINPGIGGSESYKFVFEGTTVYVYYYLPEPYTGDQLIFIRFKNIKPGIWKIRLTGVSITDGRFD 313 (455)
T ss_pred CEEEEEEECCCCCccCccCcCCCcceeEEEEECCeEEEEEEcCCCCCCCCeEEEEEccCCCccceEEEEEeccCCCceEE
Confidence
Q ss_pred --------------------CCCCCCCCCCceEEEEeeecCCC-CCCCCCCCCCcceeccccCCCCCCCceEEecCCCCe
Q psy5372 315 --------------------NCAADGYINSIYTIAIASAREDG-QSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTC 373 (586)
Q Consensus 315 --------------------~~~~~~~~~~~~vi~Vga~~~~~-~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~ 373 (586)
......|+..+++|+|||++... .++.||++|+......+++..+||..|+++.+ ++.
T Consensus 314 ~Wlp~~~~~~~~t~f~~~~~~~tit~Pa~~~~vitVga~~~~~~~~~~~Ss~G~~~~~~~kpdi~APG~~i~s~~~-~~~ 392 (455)
T cd07478 314 AWLPSRGLLSENTRFLEPDPYTTLTIPGTARSVITVGAYNQNNNSIAIFSGRGPTRDGRIKPDIAAPGVNILTASP-GGG 392 (455)
T ss_pred EEecCcCcCCCCCEeecCCCCceEecCCCCCCcEEEEEEeCCCCcccCccCCCcCCCCCcCceEEecCCCEEEeec-CCc
Confidence 00122345567899999999865 48999999998777777777899999999864 667
Q ss_pred eeccCCCCchHHHHHHHHHHHHhhC------CCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCccccc
Q psy5372 374 TCEHSGTSAAAPIAAGVLALALEAN------PNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFG 441 (586)
Q Consensus 374 ~~~~~GTS~AaP~VAG~aALl~~~~------p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G 441 (586)
|..++|||||||||||++|||+|.. |.|++++||.+|+++|++..... .++..+|||
T Consensus 393 ~~~~sGTS~Aap~vaG~aALl~~~~~~~~~~p~~~~~~ik~~L~~tA~~~~~~~-----------~pn~~~GyG 455 (455)
T cd07478 393 YTTRSGTSVAAAIVAGACALLLQWGIVRGNDPYLYGEKIKTYLIRGARRRPGDE-----------YPNPEWGYG 455 (455)
T ss_pred EEeeCcHHHHHHHHHHHHHHHHHhchhccCCCCCCHHHHHHHHHHhCccCCCCC-----------CCCCCCCCC
Confidence 8999999999999999999999964 56799999999999999875211 247889998
|
GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure |
| >cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=331.79 Aligned_cols=204 Identities=20% Similarity=0.164 Sum_probs=161.0
Q ss_pred CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCC
Q psy5372 203 PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSM 276 (586)
Q Consensus 203 d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~ 276 (586)
|..+|||||||||+|..+++.++.||||+|+|+++|+++.. ...++.++.++.. .+++|||||||......
T Consensus 183 d~~gHGThVAGIIAg~~~~~~~~~GVAP~A~I~svkv~d~~~gs~~t~~~l~~ai~~ai~-~gadVIN~SlG~~~~~~-- 259 (412)
T cd04857 183 DSGAHGTHVAGIAAAHFPEEPERNGVAPGAQIVSIKIGDTRLGSMETGTALVRAMIAAIE-TKCDLINMSYGEATHWP-- 259 (412)
T ss_pred CCCCCHHHHHHHHhCCCCCCCceEEecCCCeEEEEEeccCCCCCccchHHHHHHHHHHHH-cCCCEEEecCCcCCCCc--
Confidence 66799999999999997788889999999999999998642 2357888888887 78999999999753211
Q ss_pred CCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCC-CCceEEEEeeecC--------------CCCCCC
Q psy5372 277 DGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYI-NSIYTIAIASARE--------------DGQSPF 341 (586)
Q Consensus 277 ~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~-~~~~vi~Vga~~~--------------~~~~a~ 341 (586)
. . ..+.+++.+++.. +|++||+||||+|... +....|+ ..++||+|||+.. .+.+..
T Consensus 260 ~-~-~~~~~~~~~~~~~----~GVlvVaAAGN~G~~~--~tv~~P~~~~~~VIsVGA~~~~~~~~~~y~~~~~~~~~~~~ 331 (412)
T cd04857 260 N-S-GRIIELMNEAVNK----HGVIFVSSAGNNGPAL--STVGAPGGTTSSVIGVGAYVSPEMMAAEYSLREKLPGNQYT 331 (412)
T ss_pred c-c-hHHHHHHHHHHHh----CCCEEEEECCCCCCCc--cccCCccccCCCeEEEcceeccCccccccccccccCCcccc
Confidence 1 1 1345566665553 7999999999999753 3333444 4688999999853 355788
Q ss_pred CCCCCCcceeccccCCCCCCCceEEec-CCCCeeeccCCCCchHHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCc
Q psy5372 342 YSEECTGLIATAYSGGISDPVKIITTD-VHNTCTCEHSGTSAAAPIAAGVLALALEA----NPNMTWRDCQHILAWTSER 416 (586)
Q Consensus 342 ~S~~G~~~~~~~~~~~~apg~~i~st~-~~~~~~~~~~GTS~AaP~VAG~aALl~~~----~p~lt~~~v~~~L~~tA~~ 416 (586)
||++||..+....++..+||..|.++. .....|..++|||||||||||++|||+++ +|.+++.+||++|++||++
T Consensus 332 fSSrGP~~dG~~~pdI~APG~~I~s~p~~~~~~~~~~sGTSmAaP~VAG~aALllSa~k~~~~~~tp~~Vk~aL~~TA~~ 411 (412)
T cd04857 332 WSSRGPTADGALGVSISAPGGAIASVPNWTLQGSQLMNGTSMSSPNACGGIALLLSGLKAEGIPYTPYSVRRALENTAKK 411 (412)
T ss_pred ccccCCcccCCcCceEEeCCCcEEEcccCCCCCeEEecccHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCcc
Confidence 999999877655566678999998753 22345788999999999999999999964 7899999999999999986
Q ss_pred C
Q psy5372 417 E 417 (586)
Q Consensus 417 ~ 417 (586)
+
T Consensus 412 ~ 412 (412)
T cd04857 412 L 412 (412)
T ss_pred C
Confidence 3
|
Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing. |
| >cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=321.65 Aligned_cols=246 Identities=24% Similarity=0.260 Sum_probs=190.0
Q ss_pred CCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEE
Q psy5372 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGG 236 (586)
Q Consensus 157 ~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~ 236 (586)
+|+||+|+|||+|++.+||+|.+++.....+.......... ..+..+|||+|||+|++..++ .+..||||+|+|+.
T Consensus 1 tG~gv~VaiiDsG~~~~h~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~HGT~vagiiag~~~~-~~~~GiAp~a~i~~ 76 (267)
T cd04848 1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASYYVAVNDAGYAS---NGDGDSHGTHVAGVIAAARDG-GGMHGVAPDATLYS 76 (267)
T ss_pred CCCceEEEEEeCCCCCCCccccCcccccccccccccccCCC---CCCCCChHHHHHHHHhcCcCC-CCcccCCcCCEEEE
Confidence 69999999999999999999999876654443332211111 117789999999999998655 78899999999999
Q ss_pred EEccCCC-----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC--------CchHHHHHHHHHHHHhccCCCCcEEE
Q psy5372 237 VKLLDGE-----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD--------GPGKLSKAAIDRGIREGRQGKGVLFV 303 (586)
Q Consensus 237 ~~v~~~~-----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~--------~~~~~~~~a~~~a~~~~~~~~Gi~~V 303 (586)
+|+++.. ...+.+++.++.. .+++|||||||......... .....+.++++.+.. +|++||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~gi~iv 150 (267)
T cd04848 77 ARASASAGSTFSDADIAAAYDFLAA-SGVRIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAAN-----AGGLFV 150 (267)
T ss_pred EeccCCCCcccchHHHHHHHHHHHh-CCCeEEEccCCCCCcccccccchhhhccccchHHHHHHHHHhh-----CCeEEE
Confidence 9999643 4667778888776 78999999999875332111 123356666666655 799999
Q ss_pred EecCCCCCCCCCCC-----CCCCCCCceEEEEeeecCCCCCCCC--CCCCCcceeccccCCCCCCCceEEecCC-CCeee
Q psy5372 304 FAAGNGKYNGDNCA-----ADGYINSIYTIAIASAREDGQSPFY--SEECTGLIATAYSGGISDPVKIITTDVH-NTCTC 375 (586)
Q Consensus 304 ~AAGN~g~~~~~~~-----~~~~~~~~~vi~Vga~~~~~~~a~~--S~~G~~~~~~~~~~~~apg~~i~st~~~-~~~~~ 375 (586)
+||||++....... ...++..+++|+||+++..+....| |++|...... ...+||..|+++... ...|.
T Consensus 151 ~aaGN~~~~~~~~~~~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~s~~~~~~~~~---~~~apG~~i~~~~~~~~~~~~ 227 (267)
T cd04848 151 FAAGNDGQANPSLAAAALPYLEPELEGGWIAVVAVDPNGTIASYSYSNRCGVAANW---CLAAPGENIYSTDPDGGNGYG 227 (267)
T ss_pred EeCCCCCCCCCccccccccccCccccCCEEEEEEecCCCCcccccccccchhhhhh---eeecCcCceeecccCCCCccc
Confidence 99999987543322 1223456789999999999999988 9988644211 124688889888642 56788
Q ss_pred ccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCC
Q psy5372 376 EHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 376 ~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 415 (586)
.++|||||||+|||++|||++++|+|+++|||++|+.||+
T Consensus 228 ~~~GTS~Aap~vaG~~Al~~~~~p~l~~~~v~~~l~~tA~ 267 (267)
T cd04848 228 RVSGTSFAAPHVSGAAALLAQKFPWLTADQVRQTLLTTAT 267 (267)
T ss_pred ccceeEchHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999985
|
Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface. |
| >cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=327.30 Aligned_cols=239 Identities=24% Similarity=0.198 Sum_probs=173.2
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC-------CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCc
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT-------PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGA 232 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a 232 (586)
.|+|||||+||+.+||+|++++.............++. .....|..+|||||||+|++..++ .||||+|
T Consensus 1 ~V~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~----~GvAp~a 76 (294)
T cd07482 1 KVTVAVIDSGIDPDHPDLKNSISSYSKNLVPKGGYDGKEAGETGDINDIVDKLGHGTAVAGQIAANGNI----KGVAPGI 76 (294)
T ss_pred CcEEEEEeCCCCCCChhHhhcccccccccccCCCcCCccccccCCCCcCCCCCCcHhHHHHHHhcCCCC----ceeCCCC
Confidence 48999999999999999997654322111111111110 001116689999999999997543 4999999
Q ss_pred EEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC----CchHHHHHHHHHHHHhccCCCCcEEEE
Q psy5372 233 RVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD----GPGKLSKAAIDRGIREGRQGKGVLFVF 304 (586)
Q Consensus 233 ~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~----~~~~~~~~a~~~a~~~~~~~~Gi~~V~ 304 (586)
+|+++|+++.. ..++++++.++.. ++++|||||||......... .....+.++++++.. +|++||+
T Consensus 77 ~i~~~~v~~~~~~~~~~~~~~ai~~a~~-~~~~vin~S~G~~~~~~~~~~~~~~~~~~~~~~i~~a~~-----~g~lvv~ 150 (294)
T cd07482 77 GIVSYRVFGSCGSAESSWIIKAIIDAAD-DGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYAKS-----KGSIVVA 150 (294)
T ss_pred EEEEEEeecCCCCcCHHHHHHHHHHHHH-CCCCEEEeCCccCCCCCcccccchhhhHHHHHHHHHHHH-----CCCEEEE
Confidence 99999998643 5688899999987 78999999999754322111 111234455555444 7999999
Q ss_pred ecCCCCCCCCCC------------------CCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceE-
Q psy5372 305 AAGNGKYNGDNC------------------AADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKII- 365 (586)
Q Consensus 305 AAGN~g~~~~~~------------------~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~- 365 (586)
||||+|...+.. .+..|+..+++|+|||++..+.++.||++|......+. ||..+.
T Consensus 151 AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~S~~g~~~~~~~a-----pG~~~~~ 225 (294)
T cd07482 151 AAGNDGLDVSNKQELLDFLSSGDDFSVNGEVYDVPASLPNVITVSATDNNGNLSSFSNYGNSRIDLAA-----PGGDFLL 225 (294)
T ss_pred eCCCCCcccccccccccccccccccccCCcceecccccCceEEEEeeCCCCCcCccccCCCCcceEEC-----CCCCccc
Confidence 999999754221 34566778999999999999999999999865433222 222221
Q ss_pred --------------------EecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCH-HHHHHHHHhc
Q psy5372 366 --------------------TTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTW-RDCQHILAWT 413 (586)
Q Consensus 366 --------------------st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~-~~v~~~L~~t 413 (586)
......+.|..++|||||||+|||++|||++++|.|++ +|||++|++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~aAll~~~~p~~~~~~~v~~~L~~T 294 (294)
T cd07482 226 LDQYGKEKWVNNGLMTKEQILTTAPEGGYAYMYGTSLAAPKVSGALALIIDKNPLKKPPDEAIRILYNT 294 (294)
T ss_pred ccccCccccccccccccceeeecccCCceEeecchhhhhHHHHHHHHHHHHHCCCCCcHHHHHHHHhhC
Confidence 11123456888999999999999999999999999999 9999999976
|
Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h |
| >PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=331.47 Aligned_cols=271 Identities=29% Similarity=0.356 Sum_probs=203.5
Q ss_pred EEEEEecCccCCCcccc-cCCCCCC---cccccCCCCCCCCCCCCCCCChHHHHHHHHhccC-CCCCcceeeecCcEEEE
Q psy5372 162 NIIIIDDGMEYTHEDIK-DSFAPEL---SYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKP-NNSKCGVGVCYGARVGG 236 (586)
Q Consensus 162 ~VaViDtGid~~Hpdl~-~~~~~~~---~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~-~n~~g~~GVAp~a~l~~ 236 (586)
+|||||+|||.+||+|. +++.... +|++.+......+ ..+..+|||||||+|++.. .++.+..||||+|+|+.
T Consensus 1 ~V~viDtGid~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~HGT~va~ii~~~~~~~~~~~~Gva~~a~l~~ 78 (282)
T PF00082_consen 1 KVAVIDTGIDPNHPDFSSGNFIWSKVPGGYNFVDGNPNPSP--SDDDNGHGTHVAGIIAGNGGNNGPGINGVAPNAKLYS 78 (282)
T ss_dssp EEEEEESBBTTTSTTTTCTTEEEEEEEEEEETTTTBSTTTS--SSTSSSHHHHHHHHHHHTTSSSSSSETCSSTTSEEEE
T ss_pred CEEEEcCCcCCCChhHccCCcccccccceeeccCCCCCcCc--cccCCCccchhhhhccccccccccccccccccccccc
Confidence 69999999999999999 6655322 5677766522211 1278899999999999997 67888999999999999
Q ss_pred EEccCCC---chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCC
Q psy5372 237 VKLLDGE---TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNG 313 (586)
Q Consensus 237 ~~v~~~~---~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~ 313 (586)
+++++.. ...++.++.++....+++|||||||...... .......+..+++.+.. +|+++|+||||++...
T Consensus 79 ~~i~~~~~~~~~~~~~ai~~~~~~~~~~Vin~S~G~~~~~~-~~~~~~~~~~~~~~~~~-----~g~l~v~aaGN~~~~~ 152 (282)
T PF00082_consen 79 YKIFDNSGGTSSDLIEAIEYAVKNDGVDVINLSFGSNSGPP-DPSYSDILEEAIDYAEK-----KGILIVFAAGNNGPND 152 (282)
T ss_dssp EECSSTTSEEHHHHHHHHHHHHHHTTSSEEEECEEBEESSS-HSHHHHHHHHHHHHHHH-----TTEEEEEE--SSSSBT
T ss_pred cccccccccccccccchhhhhhhccCCcccccccccccccc-ccccccccccccccccc-----cCcceeeccccccccc
Confidence 9998654 6678889999884478999999998732100 00111234445555544 7999999999988752
Q ss_pred CCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcc-eeccccCCCCCCCceEEecCCC--CeeeccCCCCchHHHHHHH
Q psy5372 314 DNCAADGYINSIYTIAIASAREDGQSPFYSEECTGL-IATAYSGGISDPVKIITTDVHN--TCTCEHSGTSAAAPIAAGV 390 (586)
Q Consensus 314 ~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~-~~~~~~~~~apg~~i~st~~~~--~~~~~~~GTS~AaP~VAG~ 390 (586)
.. ....|+..+++|+||+++..+.++.||++|+.. .....+...+||..+.+..... ..+..++|||||||+|||+
T Consensus 153 ~~-~~~~Pa~~~~vi~Vg~~~~~~~~~~~s~~g~~~~~~~~~~di~a~G~~i~~~~~~~~~~~~~~~~GTS~Aap~vag~ 231 (282)
T PF00082_consen 153 DR-NISFPASSPNVITVGAVDNNGQPASYSNYGGPSDDGRIKPDIAAPGGNILSAVPGSDRGSYTSFSGTSFAAPVVAGA 231 (282)
T ss_dssp TB-TGEBTTTSTTSEEEEEEETTSSBSTTSSBSTTETTCTTCEEEEEECSSEEEEETTTESEEEEEEESHHHHHHHHHHH
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCcCCchHHHHHHH
Confidence 21 134566678899999999999999999997654 2222333355888887664332 3477899999999999999
Q ss_pred HHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHH
Q psy5372 391 LALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVS 450 (586)
Q Consensus 391 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~ 450 (586)
+|||++++|++++++||++|+.||.+.+.. . +..++..||||++|+++||+
T Consensus 232 ~All~~~~p~~~~~~i~~~l~~ta~~~~~~--------~-~~~~~~~~G~G~in~~~a~~ 282 (282)
T PF00082_consen 232 AALLLSKYPNLTPAEIKALLINTADDLGST--------N-GEGYDNSYGWGLINAEKALN 282 (282)
T ss_dssp HHHHHHHSTTSHHHHHHHHHHHHSBESSET--------T-SSSSHHHHTTSBE-HHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHhCcccCcC--------C-CCCCCCCccCChhCHHHHhC
Confidence 999999999999999999999999988611 1 33467789999999999984
|
; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A .... |
| >cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=305.07 Aligned_cols=218 Identities=24% Similarity=0.265 Sum_probs=171.4
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEc
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v 239 (586)
||+|||||+||+.+||+|.+++.....+.......+ +....|..+|||||||+|++. +|+++|+.+|+
T Consensus 1 gV~VaViDsGi~~~h~~l~~~~~~~~~~~~~~~~~~--~~~~~d~~gHGT~vAgiia~~----------~p~~~i~~~~v 68 (222)
T cd07492 1 GVRVAVIDSGVDTDHPDLGNLALDGEVTIDLEIIVV--SAEGGDKDGHGTACAGIIKKY----------APEAEIGSIKI 68 (222)
T ss_pred CCEEEEEeCCCCCCChhhhccccccccccccccccC--CCCCCCCCCcHHHHHHHHHcc----------CCCCeEEEEEE
Confidence 799999999999999999998665433211100011 111117889999999999875 59999999999
Q ss_pred cCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC
Q psy5372 240 LDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN 315 (586)
Q Consensus 240 ~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~ 315 (586)
++. ....+.++++|+.. ++++|||||||..... ....+.++++++.+ +|+++|+||||++...
T Consensus 69 ~~~~~~~~~~~~~~ai~~a~~-~~v~Vin~S~G~~~~~-----~~~~~~~~~~~a~~-----~g~l~V~aagN~~~~~-- 135 (222)
T cd07492 69 LGEDGRCNSFVLEKALRACVE-NDIRIVNLSLGGPGDR-----DFPLLKELLEYAYK-----AGGIIVAAAPNNNDIG-- 135 (222)
T ss_pred eCCCCCcCHHHHHHHHHHHHH-CCCCEEEeCCCCCCCC-----cCHHHHHHHHHHHH-----CCCEEEEECCCCCCCC--
Confidence 864 36778899999987 7999999999986431 23367788888877 5999999999998641
Q ss_pred CCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHH
Q psy5372 316 CAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALAL 395 (586)
Q Consensus 316 ~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~ 395 (586)
..|+..++||+||+.+..+..+.| +....+ .+||..|+++. .++.|..++|||||||+|||++|||+
T Consensus 136 ---~~Pa~~~~vi~V~~~~~~~~~~~~---~~~~~~------~apg~~i~~~~-~~~~~~~~~GTS~Aap~vaG~~All~ 202 (222)
T cd07492 136 ---TPPASFPNVIGVKSDTADDPKSFW---YIYVEF------SADGVDIIAPA-PHGRYLTVSGNSFAAPHVTGMVALLL 202 (222)
T ss_pred ---CCCccCCceEEEEecCCCCCcccc---cCCceE------EeCCCCeEeec-CCCCEEEeccHHHHHHHHHHHHHHHH
Confidence 126778999999999877765544 333333 45889998885 45678899999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCC
Q psy5372 396 EANPNMTWRDCQHILAWTSE 415 (586)
Q Consensus 396 ~~~p~lt~~~v~~~L~~tA~ 415 (586)
+++|+|+++||+++|+.||+
T Consensus 203 ~~~p~l~~~~v~~~L~~tA~ 222 (222)
T cd07492 203 SEKPDIDANDLKRLLQRLAV 222 (222)
T ss_pred HhCCCCCHHHHHHHHHHhcC
Confidence 99999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >KOG4266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=294.35 Aligned_cols=405 Identities=16% Similarity=0.139 Sum_probs=266.2
Q ss_pred ccccceeeeeEEEEEcCCc-chH--HHHHHHh------CCeEeeecCCC----CCeEEEEEcCCCCCCCCcccccccccc
Q psy5372 5 VERAEHFLNQWVVHISGDP-DIA--NQVAQDL------GFHYNGIINGL----DNHYLFSKKQHNHKTPEETTFETVGLL 71 (586)
Q Consensus 5 ~~~~~~~~~~~iV~~~~~~-~~~--~~~~~~~------g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 71 (586)
..+..+|+.||||.|+.-. ..+ .-++.++ ++++...+++. .++-++++.+.. .+....++.+|.
T Consensus 42 ~f~~tvve~EyIv~F~~y~~Ak~r~syi~skl~gS~VtnWriipR~Npa~~YPsDF~vl~i~e~~---k~~~~~~ierLe 118 (1033)
T KOG4266|consen 42 PFNVTVVESEYIVRFKQYKPAKDRRSYIESKLRGSGVTNWRIIPRINPATKYPSDFGVLWIEESG---KEAVVGEIERLE 118 (1033)
T ss_pred ccceeeecceeEEEecccccchHHHHHHHHHhhcCCCCceeEeeccCccccCCCccceEEEeccC---ccchhheeeehh
Confidence 3456789999999999431 111 1233333 23444444432 134445554322 223455689999
Q ss_pred CCCceeEEeecchhhccccchhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHH
Q psy5372 72 NDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVY 151 (586)
Q Consensus 72 ~~p~V~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw 151 (586)
.+|.|..+.|++.+.+--.-....+. +....-..+-.+...+...+.-..+-..|.-+-..|.... -..+.++-+|
T Consensus 119 ~hp~vk~v~pqr~V~r~l~y~~~~~~---p~n~t~~~~~~qg~~~~r~a~~s~~~~n~~RHl~a~~rQv-~s~l~Ad~LW 194 (1033)
T KOG4266|consen 119 MHPDVKVVFPQRRVLRGLSYPDGKKR---PGNITTSMSFEQGTESSRMADTSNTTLNWSRHLLAQKRQV-TSMLGADHLW 194 (1033)
T ss_pred cCCCceeecchhhhhhcccccccCCC---CCcceeeeeccccccccCCccccccccccchhhhhhhHHH-HHHhchhhHH
Confidence 99999999998887654210000000 0000000000000001111111112222211101111111 1456788999
Q ss_pred HcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecC
Q psy5372 152 QELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYG 231 (586)
Q Consensus 152 ~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~ 231 (586)
+ +|++|++|+|||+|||+..+||.|+. +... -+..+.+.- +|.-||||.|||+||+.. .-.|.||+
T Consensus 195 k-~GyTGa~VkvAiFDTGl~~~HPHFrn-vKER--TNWTNE~tL------dD~lgHGTFVAGvia~~~----ec~gfa~d 260 (1033)
T KOG4266|consen 195 K-KGYTGAKVKVAIFDTGLRADHPHFRN-VKER--TNWTNEDTL------DDNLGHGTFVAGVIAGRN----ECLGFASD 260 (1033)
T ss_pred h-ccccCCceEEEEeecccccCCccccc-hhhh--cCCcCcccc------ccCcccceeEeeeeccch----hhcccCCc
Confidence 9 99999999999999999999999975 2221 122222111 178899999999999973 24899999
Q ss_pred cEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecC
Q psy5372 232 ARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAG 307 (586)
Q Consensus 232 a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAG 307 (586)
++|+.+|++... .+..++|+.+++. .+++|+|+|.|+++. ++-| .....++- .. .++|+|.|+|
T Consensus 261 ~e~~~frvft~~qVSYTSWFLDAFNYAI~-~kidvLNLSIGGPDf---mD~P--FVeKVwEl-tA-----nNvIMvSAiG 328 (1033)
T KOG4266|consen 261 TEIYAFRVFTDAQVSYTSWFLDAFNYAIA-TKIDVLNLSIGGPDF---MDLP--FVEKVWEL-TA-----NNVIMVSAIG 328 (1033)
T ss_pred cceeEEEeeccceeehhhHHHHHHHHHHh-hhcceEeeccCCccc---ccch--HHHHHHhh-cc-----CcEEEEEecC
Confidence 999999998543 7889999999998 789999999999763 2222 22233332 22 4999999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceec------cccCCCCCCCceEEecCCCCeeeccCCCC
Q psy5372 308 NGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIAT------AYSGGISDPVKIITTDVHNTCTCEHSGTS 381 (586)
Q Consensus 308 N~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~------~~~~~~apg~~i~st~~~~~~~~~~~GTS 381 (586)
|+|+.....+ .|+....||.||.++.++.++.||++|-..+-. ..++..+.|..+.......+| ...+|||
T Consensus 329 NDGPLYGTLN--NPaDQsDViGVGGIdfdD~IA~FSSRGMtTWELP~GYGRmkpDiVtYG~~v~GS~v~~GC-r~LSGTS 405 (1033)
T KOG4266|consen 329 NDGPLYGTLN--NPADQSDVIGVGGIDFDDHIASFSSRGMTTWELPHGYGRMKPDIVTYGRDVMGSKVSTGC-RSLSGTS 405 (1033)
T ss_pred CCCcceeecC--CcccccceeeeccccccchhhhhccCCcceeecCCcccccCCceEeeccccccCcccccc-hhccCCc
Confidence 9998654433 456667799999999999999999999776432 222233445566555555565 5689999
Q ss_pred chHHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhccCC
Q psy5372 382 AAAPIAAGVLALALE----ANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVN 457 (586)
Q Consensus 382 ~AaP~VAG~aALl~~----~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~ 457 (586)
.|+|.|||+++|+.+ +.--+.|+-+|+.|+..|.+++..+ -...|.|++|..++.+..+.+.+
T Consensus 406 VaSPVVAGav~LLvS~~~qk~dl~NPASmKQaLiegA~kLpg~N-------------MfEQGaGkldLL~syqiL~SYkP 472 (1033)
T KOG4266|consen 406 VASPVVAGAVCLLVSVEAQKKDLLNPASMKQALIEGAAKLPGPN-------------MFEQGAGKLDLLESYQILKSYKP 472 (1033)
T ss_pred ccchhhhceeeeEeeeheehhhccCHHHHHHHHHhHHhhCCCCc-------------hhhccCcchhHHHHHHHHHhcCC
Confidence 999999999999998 2445789999999999999986543 35679999999999999998875
Q ss_pred C
Q psy5372 458 V 458 (586)
Q Consensus 458 ~ 458 (586)
.
T Consensus 473 ~ 473 (1033)
T KOG4266|consen 473 R 473 (1033)
T ss_pred C
Confidence 4
|
|
| >cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-31 Score=259.69 Aligned_cols=234 Identities=32% Similarity=0.386 Sum_probs=179.3
Q ss_pred cEEEEEecCccCCCcccccCC-CCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEc
Q psy5372 161 VNIIIIDDGMEYTHEDIKDSF-APELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239 (586)
Q Consensus 161 v~VaViDtGid~~Hpdl~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v 239 (586)
|+|+|||+|++.+||+|.... .....+++......+. ...+..+|||+||++|++..++.. ..|+||+++|+.+++
T Consensus 1 v~VaiiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~HGt~va~~i~~~~~~~~-~~g~a~~a~i~~~~~ 77 (241)
T cd00306 1 VTVAVIDTGVDPDHPDLDGLFGGGDGGNDDDDNENGPT--DPDDGNGHGTHVAGIIAASANNGG-GVGVAPGAKLIPVKV 77 (241)
T ss_pred CEEEEEeCCCCCCCcchhccccCcccccccccCcCCCC--CCCCCCCcHHHHHHHHhcCCCCCC-CEEeCCCCEEEEEEE
Confidence 689999999999999862111 1112233333222111 111678999999999999855543 499999999999999
Q ss_pred cCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC
Q psy5372 240 LDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN 315 (586)
Q Consensus 240 ~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~ 315 (586)
.+. ....++++++++...++++|||||||..... +...+.++++++... +|+++|+|+||.+.....
T Consensus 78 ~~~~~~~~~~~~~~ai~~~~~~~~~~iin~S~g~~~~~-----~~~~~~~~~~~~~~~----~~~i~V~aaGN~~~~~~~ 148 (241)
T cd00306 78 LDGDGSGSSSDIAAAIDYAAADQGADVINLSLGGPGSP-----PSSALSEAIDYALAK----LGVLVVAAAGNDGPDGGT 148 (241)
T ss_pred ecCCCCcCHHHHHHHHHHHHhccCCCEEEeCCCCCCCC-----CCHHHHHHHHHHHHh----cCeEEEEecCCCCCCCCC
Confidence 875 3677889999988338899999999986432 234677888888773 499999999999986322
Q ss_pred CCCCCCCCCceEEEEeeecCCCCCC-CCCCCCCcceeccccCCCCCCCceEEe-cCCCCeeeccCCCCchHHHHHHHHHH
Q psy5372 316 CAADGYINSIYTIAIASAREDGQSP-FYSEECTGLIATAYSGGISDPVKIITT-DVHNTCTCEHSGTSAAAPIAAGVLAL 393 (586)
Q Consensus 316 ~~~~~~~~~~~vi~Vga~~~~~~~a-~~S~~G~~~~~~~~~~~~apg~~i~st-~~~~~~~~~~~GTS~AaP~VAG~aAL 393 (586)
. +..++..+++|+||+++..+... .+++++...++.+ ||..+... ......+..++|||||||+|||++||
T Consensus 149 ~-~~~p~~~~~vi~Vga~~~~~~~~~~~~~~~~~~~~~a------pg~~~~~~~~~~~~~~~~~~GTS~Aap~vaG~~Al 221 (241)
T cd00306 149 N-IGYPAASPNVIAVGAVDRDGTPASPSSNGGAGVDIAA------PGGDILSSPTTGGGGYATLSGTSMAAPIVAGVAAL 221 (241)
T ss_pred C-ccCCccCCceEEEEecCcCCCccCCcCCCCCCceEEe------CcCCccCcccCCCCCeEeeccHHHHHHHHHHHHHH
Confidence 1 35677889999999999999988 8999998888855 45554442 22456688999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHhc
Q psy5372 394 ALEANPNMTWRDCQHILAWT 413 (586)
Q Consensus 394 l~~~~p~lt~~~v~~~L~~t 413 (586)
+++++|++++.+++++|+.+
T Consensus 222 ~~~~~~~~~~~~~~~~l~~t 241 (241)
T cd00306 222 LLSANPDLTPAQVKAALLST 241 (241)
T ss_pred HHHHCCCCCHHHHHHHHhhC
Confidence 99999999999999999864
|
Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav |
| >cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=260.08 Aligned_cols=192 Identities=18% Similarity=0.094 Sum_probs=137.3
Q ss_pred CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCCchhHHHHHHhhh-cCCCCeEEEcCCCCCCCCCC---CCC
Q psy5372 203 PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQF-GLDKVDIYSGSWGPPDDGKS---MDG 278 (586)
Q Consensus 203 d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~-~~~~~~Vin~S~G~~~~~~~---~~~ 278 (586)
|.++|||||||||+|.. |++|+++++..++.....+.+..++.|+. ...+++|||||||....... ...
T Consensus 35 ~~~~HGThVAgiiag~~-------~~~p~a~~~~~~~~~~~~~~~~~~i~~~~~~~~gv~VINmS~G~~~~~~~~~~~~~ 107 (247)
T cd07488 35 TFDDHATLVASIMGGRD-------GGLPAVNLYSSAFGIKSNNGQWQECLEAQQNGNNVKIINHSYGEGLKRDPRAVLYG 107 (247)
T ss_pred CCCCHHHHHHHHHHhcc-------CCCCccceehhhhCCCCCCccHHHHHHHHHhcCCceEEEeCCccCCCCCccccccc
Confidence 78999999999999972 45699999976665444455666666663 23689999999997643210 011
Q ss_pred chHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC-CCCCCCCCCceEEEEeeecCCCCCCCC---CCCC--Ccceec
Q psy5372 279 PGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN-CAADGYINSIYTIAIASAREDGQSPFY---SEEC--TGLIAT 352 (586)
Q Consensus 279 ~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~-~~~~~~~~~~~vi~Vga~~~~~~~a~~---S~~G--~~~~~~ 352 (586)
. ..+..+++++..+ +|+++|+||||+|..... ..+..|+..+++|+|||++..+.++.+ |+++ +.....
T Consensus 108 ~-~~l~~aid~~a~~----~GvlvV~AAGN~g~~~~~~~~i~~pa~~~nvItVGA~d~~g~~~~~s~~sn~~~~~~~~~~ 182 (247)
T cd07488 108 Y-ALLSLYLDWLSRN----YEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVGSTDRNGDRFFASDVSNAGSEINSYGR 182 (247)
T ss_pred c-chHHHHHHHHHhh----CCEEEEEecCCCCCCccCCCCcCCccccCCeEEEEEecCCCCcceecccccccCCCCCCCC
Confidence 1 1455666666552 499999999999985322 234567788999999999999987544 5443 211112
Q ss_pred cccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHH
Q psy5372 353 AYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHI 409 (586)
Q Consensus 353 ~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~ 409 (586)
..+...+||..|++ ..+.|..++|||||||||||++|||++++|++.+.++-.+
T Consensus 183 ~~~di~APG~~i~s---~~~~~~~~sGTSmAaP~VaG~aAlll~~~p~~~~~~~~~~ 236 (247)
T cd07488 183 RKVLIVAPGSNYNL---PDGKDDFVSGTSFSAPLVTGIIALLLEFYDRQYKKGNNNL 236 (247)
T ss_pred ceeEEEEeeeeEEC---CCCceeeecccchHHHHHHHHHHHHHHHChhhhhCcchhH
Confidence 22334679999988 3456788999999999999999999999999886544333
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >KOG1114|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=249.70 Aligned_cols=230 Identities=21% Similarity=0.168 Sum_probs=172.7
Q ss_pred CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCC
Q psy5372 203 PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSM 276 (586)
Q Consensus 203 d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~ 276 (586)
...-||||||||++|+....--.-||||+|+|+++++.|+. ...+..|+..+++ +++||||||||-...-.
T Consensus 308 ~Sg~HGTHVAgIa~anhpe~p~~NGvAPgaqIvSl~IGD~RLgsMETgtaltRA~~~v~e-~~vDiINmSyGE~a~~p-- 384 (1304)
T KOG1114|consen 308 VSGPHGTHVAGIAAANHPETPELNGVAPGAQIVSLKIGDGRLGSMETGTALTRAMIEVIE-HNVDIINMSYGEDAHLP-- 384 (1304)
T ss_pred cCCCCcceehhhhccCCCCCccccCCCCCCEEEEEEecCccccccccchHHHHHHHHHHH-hcCCEEEeccCccCCCC--
Confidence 45679999999999986555467899999999999999864 4456677766666 88999999999653211
Q ss_pred CCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecC--------------CCCCCCC
Q psy5372 277 DGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARE--------------DGQSPFY 342 (586)
Q Consensus 277 ~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~--------------~~~~a~~ 342 (586)
... -+-+.+.+++.. +|+|+|.+|||+|+.......++-. ...+|.|||.-. .+....|
T Consensus 385 -n~G-RviEl~~e~vnK----r~vI~VsSAGN~GPaltTVGaPggt-TssvIgVGAYVsp~mm~a~y~~~e~vp~~~YtW 457 (1304)
T KOG1114|consen 385 -NSG-RVIELLRELVNK----RGVIYVSSAGNNGPALTTVGAPGGT-TSSVIGVGAYVSPGMMQAEYSVREPVPSNPYTW 457 (1304)
T ss_pred -Ccc-hHHHHHHHHhhh----ccEEEEEeCCCCCCceeeccCCCCc-ccceEeeeeecCHHHHHhhhhhhccCCCCcccc
Confidence 111 244555566654 8999999999999976555544422 347999999742 3445678
Q ss_pred CCCCCcceeccccCCCCCCCceEEecC-CCCeeeccCCCCchHHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCcC
Q psy5372 343 SEECTGLIATAYSGGISDPVKIITTDV-HNTCTCEHSGTSAAAPIAAGVLALALEA----NPNMTWRDCQHILAWTSERE 417 (586)
Q Consensus 343 S~~G~~~~~~~~~~~~apg~~i~st~~-~~~~~~~~~GTS~AaP~VAG~aALl~~~----~p~lt~~~v~~~L~~tA~~~ 417 (586)
|++||+.+...-.+..|||..|.+.-. .-.....|+|||||+|.++|.+|||++. +-.+||.-||..|..||++.
T Consensus 458 sSRgP~~DG~lGVsi~APggAiAsVP~~tlq~~qLMNGTSMsSP~acG~IAllLSgLKa~ni~ytpysVrrAlenTa~~l 537 (1304)
T KOG1114|consen 458 SSRGPCLDGDLGVSISAPGGAIASVPQYTLQNSQLMNGTSMSSPSACGAIALLLSGLKAQNIPYTPYSVRRALENTATKL 537 (1304)
T ss_pred ccCCCCcCCCcceEEecCCccccCCchhhhhhhhhhCCcccCCccccchHHHHHHHHHhcCCCCcHHHHHHHHHhccccc
Confidence 999998876443344567766655311 1122467999999999999999999984 67899999999999999998
Q ss_pred CCCCCCCccccCCCcccCCcccccccCHHHHHHHHhcc
Q psy5372 418 PLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455 (586)
Q Consensus 418 ~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~ 455 (586)
+..+ ....|.|++++.+|.+...+.
T Consensus 538 ~~id-------------~faqG~GmlqVdkAyEyL~q~ 562 (1304)
T KOG1114|consen 538 GDID-------------SFAQGQGMLQVDKAYEYLAQS 562 (1304)
T ss_pred Cccc-------------hhccCcceeehhHHHHHHHHh
Confidence 6554 467799999999999877655
|
|
| >COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=226.97 Aligned_cols=251 Identities=25% Similarity=0.284 Sum_probs=195.7
Q ss_pred CCCchHHHHcC--CCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhcc-CC
Q psy5372 144 DLNIVPVYQEL--NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMK-PN 220 (586)
Q Consensus 144 ~i~~~~aw~~~--~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~-~~ 220 (586)
.+.....|. . +++|+||+|+|+|+||+..||+|..+.... ++|.+....+ +. .+..+|||||+|+|++. ..
T Consensus 126 ~~~~~~~~~-~~~~~~g~gv~~~vid~gv~~~~~~~~~~~~~~--~~~~~~~~~~-~~--~d~~~hGt~vag~ia~~~~~ 199 (508)
T COG1404 126 AISVGALVA-NGAGLTGKGVTVAVIDTGVDASHPDLAGSAVAG--GDFVDGDPEP-PF--LDDNGHGTHVAGTIAAVIFD 199 (508)
T ss_pred hcccccccc-cccCCCCCCeEEEEeccCCCCCChhhhcccccc--cccccCCCCC-CC--CCCCCCcceeeeeeeeeccc
Confidence 345667888 6 899999999999999999999999875543 5666665543 01 17899999999999994 36
Q ss_pred CCCcceeeecCcEEEEEEccCC-----CchhHHHHHHhhhcCCC--CeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHh
Q psy5372 221 NSKCGVGVCYGARVGGVKLLDG-----ETTDLIESKALQFGLDK--VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293 (586)
Q Consensus 221 n~~g~~GVAp~a~l~~~~v~~~-----~~~~~~~a~~~~~~~~~--~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~ 293 (586)
|..+..|++|++.++.+++++. ...+++.++.++.. .+ +++||||+|.. ........+..++..++..
T Consensus 200 ~~~~~~g~a~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~~~~in~s~g~~----~~~~~~~~~~~a~~~~~~~ 274 (508)
T COG1404 200 NGAGVAGVAPGAKLLLVKVLGSGGGSGELSDVAEGIEGAAN-LGGPADVINLSLGGS----LSDSASPALGDALAAAANA 274 (508)
T ss_pred CCCccccccCCCcEEEEEeccCCCCcccHHHHHHHHHHHHh-cCCCCcEEEecCCCC----ccccccHHHHHHHHHHHHc
Confidence 7778899999999999999863 25666788888877 55 99999999975 1122334677888888774
Q ss_pred ccCCCCcEEEEecCCCCCCCCCCCCCCCCCC--ceEEEEeeecCCCCCCCCCCCCCc--ceeccccCCCCCCCceEE---
Q psy5372 294 GRQGKGVLFVFAAGNGKYNGDNCAADGYINS--IYTIAIASAREDGQSPFYSEECTG--LIATAYSGGISDPVKIIT--- 366 (586)
Q Consensus 294 ~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~--~~vi~Vga~~~~~~~a~~S~~G~~--~~~~~~~~~~apg~~i~s--- 366 (586)
.++++|+|+||.+..........|... +.+++|++++..+..+.||++|.. ... .+||..+..
T Consensus 275 ----g~v~~v~aagn~~~~~~~~~~~~p~~~~~~~~i~v~a~~~~~~~~~~s~~g~~~~~~~------~apg~~i~~~~~ 344 (508)
T COG1404 275 ----GGVVIVAAAGNDGSNASGGDLAYPASYPAPNVIAVGALDLSDTVASFSNDGSPTGVDI------AAPGVNILSLSA 344 (508)
T ss_pred ----CCEEEEEecccCCCCCccccccCCcccCCCceEEEecCCCCCccccccccCCCCCcce------eCCCcccccccc
Confidence 349999999999986421111222333 489999999999999999999975 333 457777765
Q ss_pred --ecCCCCe--eeccCCCCchHHHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCc
Q psy5372 367 --TDVHNTC--TCEHSGTSAAAPIAAGVLALALEANP-NMTWRDCQHILAWTSER 416 (586)
Q Consensus 367 --t~~~~~~--~~~~~GTS~AaP~VAG~aALl~~~~p-~lt~~~v~~~L~~tA~~ 416 (586)
+ ..+.. +..+.||||++|+|+|++||+++.+| .+++.+++..+..++..
T Consensus 345 ~~~-~~~~~~~~~~~~Gts~a~p~v~g~aal~~~~~~~~~~~~~~~~~~~~~~~~ 398 (508)
T COG1404 345 VNT-LPGDGADYVTLSGTSMAAPHVSGVAALVLSANPNELTPAQVRNLIVTTAGL 398 (508)
T ss_pred cee-eeCCccceEeeccccccccHHHHHHHHHHccCcccCCHHHHHHHHhhcccc
Confidence 3 23443 89999999999999999999999999 89999999998888874
|
|
| >cd04056 Peptidases_S53 Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=172.45 Aligned_cols=216 Identities=16% Similarity=0.067 Sum_probs=131.3
Q ss_pred ceeeecCcEEEEEEccCCCchhHHHHHHhhhcCC--CCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEE
Q psy5372 225 GVGVCYGARVGGVKLLDGETTDLIESKALQFGLD--KVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLF 302 (586)
Q Consensus 225 ~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~--~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~ 302 (586)
..||||+|+|+.+++.+......+.++.+++... +++|||+|||..+.... ......+.++++++.. +|++|
T Consensus 83 ~~gvAP~a~i~~~~~~~~~~~~~~~a~~~ai~~~~~~~~VIS~S~G~~e~~~~-~~~~~~~~~~~~~a~~-----~Gitv 156 (361)
T cd04056 83 AGAIAPGANITLYFAPGTVTNGPLLAFLAAVLDNPNLPSVISISYGEPEQSLP-PAYAQRVCNLFAQAAA-----QGITV 156 (361)
T ss_pred HHhccCCCeEEEEEECCcCccHHHHHHHHHHHcCCCCCCEEEccCCccccccC-HHHHHHHHHHHHHHHh-----CCeEE
Confidence 5899999999999999875566667777766643 89999999998653211 1122345666666666 69999
Q ss_pred EEecCCCCCCCCC-------CCCCCCCCCceEEEEeeecCCCCCCC--------------C-CCCCCcce----------
Q psy5372 303 VFAAGNGKYNGDN-------CAADGYINSIYTIAIASAREDGQSPF--------------Y-SEECTGLI---------- 350 (586)
Q Consensus 303 V~AAGN~g~~~~~-------~~~~~~~~~~~vi~Vga~~~~~~~a~--------------~-S~~G~~~~---------- 350 (586)
|+||||+|..... .....|+.+|+|++||+++....... + |.-|-+..
T Consensus 157 vaAsGd~G~~~~~~~~~~~~~~~~~Pas~P~V~sVGgt~~~~~~~~~~~~~~~~~~~~~~~~SGGG~S~~f~~P~yQ~~~ 236 (361)
T cd04056 157 LAASGDSGAGGCGGDGSGTGFSVSFPASSPYVTAVGGTTLYTGGTGSSAESTVWSSEGGWGGSGGGFSNYFPRPSYQSGA 236 (361)
T ss_pred EEeCCCCCCCCCCCCCCCCcccCCCCCCCCceeeeecccccCCCcccccccccccccCCcccccCCcCCCCCCChhhhhc
Confidence 9999999986432 23456889999999999986443321 1 11111110
Q ss_pred -------------eccccCCCCC---CCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCC-----CCH--HHHH
Q psy5372 351 -------------ATAYSGGISD---PVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPN-----MTW--RDCQ 407 (586)
Q Consensus 351 -------------~~~~~~~~ap---g~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~-----lt~--~~v~ 407 (586)
...+|+..+. +...+.. ..+.+....|||+|||++||++|||.++... +.. ..|.
T Consensus 237 ~~~~~~~~~~~~~gR~~PDVaa~a~~~~g~~i~--~~g~~~~~gGTS~aaP~~Ag~~Al~n~~~~~~g~~~lG~~np~LY 314 (361)
T cd04056 237 VLGLPPSGLYNGSGRGVPDVAANADPGTGYLVV--VNGQWYLVGGTSAAAPLFAGLIALINQARLAAGKPPLGFLNPLLY 314 (361)
T ss_pred ccCCCCCCCCCCCCCcCCeeecccCCCCCEEEE--ECCeEEeeCCccHHHHHHHHHHHHHHHHhhhcCCCCccccCHHHh
Confidence 0111111111 2222211 1244667899999999999999999998652 211 2333
Q ss_pred HHHHh---cCCcCCCCCCCC--ccccCCCcccCCcccccccCHHHH
Q psy5372 408 HILAW---TSEREPLSHVSG--WERNARDLWFHSAYGFGLINTFKL 448 (586)
Q Consensus 408 ~~L~~---tA~~~~~~~~~~--w~~n~~g~~~~~~~G~G~vna~~A 448 (586)
++-.. .-+++....+.. -..-.++..||...|+|.+|..+.
T Consensus 315 ~~~~~~~~~f~Dit~G~N~~~~~~g~~A~~GwD~vTGlGtp~~~~l 360 (361)
T cd04056 315 QLAATAPSAFNDITSGNNGGCGGAGYPAGPGWDPVTGLGTPNFAKL 360 (361)
T ss_pred hCccccCCCceecCCCCCCCCCCCCcCCCCCcccccCCCCCChHhh
Confidence 33322 111221111100 001124456899999999998765
|
Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin- |
| >PF01483 P_proprotein: Proprotein convertase P-domain; InterPro: IPR002884 This domain, termed the P domain is approximately 150 amino acids in length and C-terminal to a serine endopeptidase domain which belong to MEROPS peptidase family S8 (clan SB), subfamily S8B (kexin) | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.2e-18 Score=139.58 Aligned_cols=82 Identities=38% Similarity=0.803 Sum_probs=68.0
Q ss_pred eeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCCCCCCCCCCcccceEeeeeecCCCCCceEEEEEEE-C--CCCCee
Q psy5372 501 LEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFD-T--KYDGLL 577 (586)
Q Consensus 501 ~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d-~--~~~g~l 577 (586)
||+|+|.++|+|+++|||+|+|+||+||++.|+.++..|....++.+|+|++++|+||+++|+|+|+|.| . ++.|.|
T Consensus 1 vE~v~v~v~i~H~~~gdL~i~L~SP~Gt~~~L~~~~~~d~~~~~~~~~~f~~~~f~Ge~~~G~W~L~v~D~~~~~~~G~l 80 (87)
T PF01483_consen 1 VEHVQVSVDITHPYRGDLRITLISPSGTRSTLKDRRGSDDSGSGFLNWTFTSVAFWGESANGTWTLRVTDRNSPGDTGTL 80 (87)
T ss_dssp EEEEEEEEEEEESSGGGEEEEEE-TT--EEEEE-SSTTHHHSTSEEEEEEEESTTTT-B--EEEEEEEEEBSSTTS-EEE
T ss_pred CcEEEEEEEEEcCCcCCEEEEEECCCCCEEEEECCcCCCcccccccccEEEEEeecCccCCCEEEEEEEECCCCCCcEEE
Confidence 6999999999999999999999999999999999999876678888999999999999999999999999 4 578999
Q ss_pred eEEEc
Q psy5372 578 DFITR 582 (586)
Q Consensus 578 ~~~~~ 582 (586)
+-.++
T Consensus 81 ~~w~L 85 (87)
T PF01483_consen 81 NSWSL 85 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87765
|
The domain is primarily associated with the calcium-dependent serine endopeptidases, kex2/subtilisin proprotein convertases (PCs), which have been identified in all eukaryotes [] and in the gammaproteobacteria, Nostoc (cyanobacteria) and in Streptomyces avermitilis. The P domain appears necessary for folding and maintaining the endopeptidase catalytic domain and to regulate its calcium and acidic pH dependence. In addition, contained within the middle of the P domain in most PC family members is the cognate integrin binding RGD sequence [], which may be required for intracellular compartmentalization and maintenance of enzyme stability within the ER. The integrity of the RGD sequence of proprotein convertase PC1 is critical for its zymogen and C-terminal processing and for its cellular trafficking [, ]. The carboxy-terminal tail provides uniqueness to each PC family member being the least conserved region of all convertases [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1P8J_E 1OT5_B 2ID4_A 1R64_A 3HJR_A. |
| >COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=129.64 Aligned_cols=107 Identities=28% Similarity=0.516 Sum_probs=84.0
Q ss_pred cCcceecCCCC--ceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCC--CEEEeecCCCCCCCCCCc
Q psy5372 470 VGSSTGFSYAS--SWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSG--VKSVLMEPRPQDDCKTGF 545 (586)
Q Consensus 470 ~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsG--T~s~l~~~~~~d~~~~g~ 545 (586)
......+|++. .+.+++.+. +..++.+++|+|+|+|+++|||+|+|+||+| ..+.+...|+.|+...+|
T Consensus 11 ~~~~~~~pd~~~~~~~~~~~v~-------~~~~ik~v~V~VdI~H~yrGDL~I~L~sP~g~~Il~~~~~~~~~D~~~q~~ 83 (177)
T COG4935 11 TNLNLTLPDNDLQTISSSFSVA-------DANFIKDVTVRVDITHEYRGDLRITLISPSGQGILSNLTLGRRYDDDSQGY 83 (177)
T ss_pred eccccccCCCcccccEEEEEec-------CCCceeeEEEEEeccccccccEEEEEeCCCCcceEEeeccCCcccccccee
Confidence 34445566544 345566664 3345569999999999999999999999996 444444466778889999
Q ss_pred ccceEeeeeecCCCCCceEEEEEEECC--CCCeeeEEEcc
Q psy5372 546 VDWSILTLKHWGEDPVGEWKFEIFDTK--YDGLLDFITRN 583 (586)
Q Consensus 546 ~~~~~~s~~f~GE~~~G~Wtl~v~d~~--~~g~l~~~~~~ 583 (586)
++|.||.+.+|||.+.|+|+|+|.|.. ..|.|+..+..
T Consensus 84 ~~~s~~l~~~~ge~~~G~W~L~V~D~~~g~~Gtf~sW~l~ 123 (177)
T COG4935 84 NDQSFMLVQLWGERAEGNWRLEVQDLAGGHTGTFHSWGLK 123 (177)
T ss_pred eeeeeeeeeeccCCCCceEEEEEEecCCCceeEEEEeEEe
Confidence 999999999999999999999999994 68888776654
|
|
| >COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.8e-09 Score=120.16 Aligned_cols=172 Identities=17% Similarity=0.154 Sum_probs=93.5
Q ss_pred CchHHHHcCCCCCCCcEEEEEe-cCccCCCcccccCCCCCCcccccCCCCCCCCC---CCCCCCChHHHHHHHHhccCCC
Q psy5372 146 NIVPVYQELNINGAGVNIIIID-DGMEYTHEDIKDSFAPELSYNFNAEKWDITPR---YEDPRNKHGTRCAGELVMKPNN 221 (586)
Q Consensus 146 ~~~~aw~~~~~~G~gv~VaViD-tGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~HGT~vAgiia~~~~n 221 (586)
|+..+++ .+.+|+|++||||| -|-.....|+.- ++-..+-+.|.+. +.....+|+||-+..+.-.
T Consensus 216 nit~l~~-~g~tGkG~tIaIid~yG~p~~~~dl~~-------Fd~~~Gip~~~~~~V~~ig~g~~~~~~g~~E~sLD--- 284 (1174)
T COG4934 216 NITALYE-SGATGKGETIAIIDAYGDPYNNQDLYS-------FDQQYGIPNPILSRVTYIGPGIGSGTGGAEETSLD--- 284 (1174)
T ss_pred ceeeccc-CCCCCCCcEEEEEeccCCcccHHHHHH-------HHHhhCCCCCCceEEEEeCCCCCCCCCccccceee---
Confidence 4455666 78999999999999 565444444321 1111111111000 0003456666665422111
Q ss_pred CCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcE
Q psy5372 222 SKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVL 301 (586)
Q Consensus 222 ~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~ 301 (586)
-+-..-+||+|+|..+-...........+.........--++-.||+....- ........++++....++.. +|+.
T Consensus 285 VE~s~A~AP~A~I~lvvap~~~~~a~dna~n~~~~~~~s~~ip~S~s~~~~~---~~~~~~~~~~~d~l~~qasa-eGIT 360 (1174)
T COG4934 285 VEWSHAMAPKANIDLVVAPNPLVSALDNAYNEVLYYMVSFVIPISWSYAEFQ---GPISPGYADLMDLLYEQASA-EGIT 360 (1174)
T ss_pred hhhhhccCccCceEEEEcCCCceehhhHHHHHHHHhhhcccccchhHHHHhc---cCCChHHHHHHHHHHHHhhc-cceE
Confidence 1112457999999998886655555555544433221113333566553211 11111233444444443332 7999
Q ss_pred EEEecCCCCCCCCC----CCCCCCCCCceEEEEee
Q psy5372 302 FVFAAGNGKYNGDN----CAADGYINSIYTIAIAS 332 (586)
Q Consensus 302 ~V~AAGN~g~~~~~----~~~~~~~~~~~vi~Vga 332 (586)
+++|+|+.|...+. .....|+++|+|.+||.
T Consensus 361 i~AASGD~Gay~~~~~~~~sv~~PasSPYVtsVGG 395 (1174)
T COG4934 361 IFAASGDSGAYDDTPTPYLSVNFPASSPYVTSVGG 395 (1174)
T ss_pred EEEecccccccCCCcccceeecccCCCccEEeecC
Confidence 99999999987542 23456888999999999
|
|
| >PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00019 Score=58.21 Aligned_cols=40 Identities=18% Similarity=0.113 Sum_probs=32.6
Q ss_pred eEEEEEcCCCCCCCCccccccccccCCCceeEEeecchhhc
Q psy5372 47 HYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFAKHL 87 (586)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~~~~ 87 (586)
.+.|.. .++++++.++++.+++|+++|+|++||||..+++
T Consensus 42 ~~~y~~-~~~Gfs~~l~~~~i~~L~~~p~V~~Ve~D~~v~l 81 (82)
T PF05922_consen 42 LYSYDN-AFNGFSAKLSEEEIEKLRKDPGVKSVEPDQVVSL 81 (82)
T ss_dssp EEEESS-TSSEEEEEE-HHHHHHHHTSTTEEEEEEECEEEE
T ss_pred EEEEee-eEEEEEEEeCHHHHHHHHcCCCeEEEEeCceEec
Confidence 344433 5788899999999999999999999999998865
|
In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Limited proteolysis of most large protein precursors is carried out in vivo by the subtilisin-like pro-protein convertases. Many important biological processes such as peptide hormone synthesis, viral protein processing and receptor maturation involve proteolytic processing by these enzymes []. The subtilisin-serine protease (SRSP) family hormone and pro-protein convertases (furin, PC1/3, PC2, PC4, PACE4, PC5/6, and PC7/7/LPC) act within the secretory pathway to cleave polypeptide precursors at specific basic sites, generating their biologically active forms. Serum proteins, pro-hormones, receptors, zymogens, viral surface glycoproteins, bacterial toxins, amongst others, are activated by this route []. The SRSPs share the same domain structure, including a signal peptide, the pro-peptide, the catalytic domain, the P/middle or homo B domain, and the C terminus. Proteinase propeptide inhibitors (sometimes refered to as activation peptides) are responsible for the modulation of folding and activity of the pro-enzyme or zymogen. The pro-segment docks into the enzyme moiety shielding the substrate binding site, thereby promoting inhibition of the enzyme. Several such propeptides share a similar topology [], despite often low sequence identities []. The propeptide region has an open-sandwich antiparallel-alpha/antiparallel-beta fold, with two alpha-helices and four beta-strands with a (beta/alpha/beta)x2 topology. This group of sequences contain the propeptide domain at the N terminus of peptidases belonging to MEROPS family S8A, subtilisins. A number of the members of this group of sequences belong to MEROPS inhibitor family I9, clan I-. The propeptide is removed by proteolytic cleavage; removal activating the enzyme.; GO: 0004252 serine-type endopeptidase activity, 0042802 identical protein binding, 0043086 negative regulation of catalytic activity; PDB: 3CNQ_P 1SPB_P 3CO0_P 1ITP_A 1V5I_B 1SCJ_B 3P5B_P 2XTJ_P 2W2M_P 2P4E_P .... |
| >PF09315 DUF1973: Domain of unknown function (DUF1973); InterPro: IPR015394 These functionally uncharacterised domains are found in various eukaryotic calcium-dependent chloride channels | Back alignment and domain information |
|---|
Probab=85.79 E-value=5.8 Score=37.27 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=50.3
Q ss_pred eecCCCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCCCCCCCCCCcccceEeee
Q psy5372 474 TGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTL 553 (586)
Q Consensus 474 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~ 553 (586)
..+..+....-+|.++...|... .+.+.+.......|.|++|+|+...-.. .| ... .+...
T Consensus 9 ~~~~~~~~~~gtv~ID~tvG~~T----------~f~v~w~~~~~p~i~L~~P~G~~~~~~~---~d-~~~-----~~~~i 69 (179)
T PF09315_consen 9 LSLSPGEWFTGTVYIDSTVGNNT----------VFTVTWQNSSPPSITLTDPSGTVYTTFT---TD-SNS-----KTARI 69 (179)
T ss_pred EEecCCCeEEeEEEECCCCCCCe----------EEEEEECCCCCceEEEECCCCCEEeeeE---Ec-ccc-----cEEEE
Confidence 34556677778888876655421 2345555557789999999999886511 12 111 12233
Q ss_pred eecCCCCCceEEEEEEEC
Q psy5372 554 KHWGEDPVGEWKFEIFDT 571 (586)
Q Consensus 554 ~f~GE~~~G~Wtl~v~d~ 571 (586)
..-|..-.|+|+++|.+.
T Consensus 70 ~ipg~ae~G~W~y~i~~~ 87 (179)
T PF09315_consen 70 QIPGTAEVGTWTYSITNT 87 (179)
T ss_pred ECCCCcccccEEEEEecC
Confidence 444566699999999655
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 586 | ||||
| 1p8j_A | 471 | Crystal Structure Of The Proprotein Convertase Furi | 2e-92 | ||
| 2id4_A | 503 | The 1.9 A Structure Of Kex2 In Complex With An Ac-R | 3e-79 | ||
| 1r64_A | 481 | The 2.2 A Crystal Structure Of Kex2 Protease In Com | 6e-79 | ||
| 1ot5_A | 477 | The 2.4 Angstrom Crystal Sructure Of Kex2 In Comple | 8e-79 | ||
| 3hjr_A | 600 | Crystal Structure Of Serine Protease Of Aeromonas S | 7e-20 | ||
| 1kn6_A | 90 | Solution Structure Of The Mouse Prohormone Converta | 1e-10 |
| >pdb|1P8J|A Chain A, Crystal Structure Of The Proprotein Convertase Furin Length = 471 | Back alignment and structure |
|
| >pdb|2ID4|A Chain A, The 1.9 A Structure Of Kex2 In Complex With An Ac-R-E-R-K-Chloromethyl Ketone Inhibitor. Length = 503 | Back alignment and structure |
|
| >pdb|1R64|A Chain A, The 2.2 A Crystal Structure Of Kex2 Protease In Complex With Ac-Arg- Glu-Lys-Boroarg Peptidyl Boronic Acid Inhibitor Length = 481 | Back alignment and structure |
|
| >pdb|1OT5|A Chain A, The 2.4 Angstrom Crystal Sructure Of Kex2 In Complex With A Peptidyl- Boronic Acid Inhibitor Length = 477 | Back alignment and structure |
|
| >pdb|3HJR|A Chain A, Crystal Structure Of Serine Protease Of Aeromonas Sobria Length = 600 | Back alignment and structure |
|
| >pdb|1KN6|A Chain A, Solution Structure Of The Mouse Prohormone Convertase 1 Pro- Domain Length = 90 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 586 | |||
| 2id4_A | 503 | Kexin; KEX2, kexin, furin, proprotein, prohormone, | 1e-150 | |
| 1p8j_A | 471 | Furin precursor; prohormone convertase, SPC1, PACE | 1e-148 | |
| 2oxa_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 1e-113 | |
| 1to2_E | 281 | Subtilisin BPN'; serine protease, hydrolase; HET: | 2e-28 | |
| 2ixt_A | 310 | 36KDA protease; serine protease, sphericase, subti | 3e-28 | |
| 1wmd_A | 434 | Protease; alpha-beta hydrolase fold, jelly-roll be | 3e-27 | |
| 1dbi_A | 280 | AK.1 serine protease; hydrolase; 1.80A {Bacillus S | 4e-27 | |
| 1r0r_E | 274 | Subtilisin carlsberg; high resolution, serine prot | 8e-27 | |
| 1thm_A | 279 | Thermitase; hydrolase(serine protease); 1.37A {The | 2e-26 | |
| 3afg_A | 539 | Subtilisin-like serine protease; propeptide, therm | 3e-26 | |
| 2x8j_A | 327 | Intracellular subtilisin protease; hydrolase, seri | 9e-26 | |
| 2z30_A | 320 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 3e-25 | |
| 1gci_A | 269 | Subtilisin; hydrolase, serine protease; 0.78A {Bac | 1e-24 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 2e-24 | |
| 2z2z_A | 395 | TK-subtilisin precursor; thermococcus kodakaraensi | 4e-24 | |
| 2iy9_A | 347 | SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col | 6e-24 | |
| 3t41_A | 471 | Epidermin leader peptide processing serine protea; | 2e-22 | |
| 1kn6_A | 90 | Prohormone convertase 1; beta-alpha-beta-BETA-alph | 3e-22 | |
| 3lpc_A | 340 | APRB2; protease, subtilase, virulence factor, hydr | 9e-22 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 1e-20 | |
| 4aks_A | 360 | PATG, thiazoline oxidase/subtilisin-like protease; | 1e-19 | |
| 2p4e_P | 692 | Proprotein convertase subtilisin/kexin type 9; pro | 5e-17 | |
| 2qtw_B | 546 | Proprotein convertase subtilisin/kexin type 9; cor | 2e-16 | |
| 1sh7_A | 284 | Extracellular subtilisin-like serine proteinase; c | 7e-16 | |
| 4dzt_A | 276 | Aqualysin-1, aqualysin-I; serine protease, calcium | 1e-15 | |
| 2b6n_A | 278 | Proteinase K; S binding, substrate specificity, pr | 4e-15 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 2e-14 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 1e-08 | |
| 2pwa_A | 279 | Proteinase K; structure, alanine boronic acid, hyd | 4e-14 | |
| 3f7m_A | 279 | Alkaline serine protease VER112; verticillium psal | 5e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 5e-04 |
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 | Back alignment and structure |
|---|
Score = 440 bits (1132), Expect = e-150
Identities = 182/453 (40%), Positives = 264/453 (58%), Gaps = 11/453 (2%)
Query: 120 FTDEWWPMQWYEQDYRLSNSSK-KLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIK 178
D + QW+ L N S D+N++ ++ NI GAGV I+DDG++Y +ED+K
Sbjct: 20 INDPLFERQWH-----LVNPSFPGSDINVLDLW-YNNITGAGVVAAIVDDGLDYENEDLK 73
Query: 179 DSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVK 238
D+F E S++FN PR D + HGTRCAGE+ K N+ CGVGV Y A++ G++
Sbjct: 74 DNFCAEGSWDFNDNTNLPKPRLSD--DYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIR 131
Query: 239 LLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298
+L G+ T E+ +L +GLD DIYS SWGP DDG+ + GP L K A+ +G+ EGR K
Sbjct: 132 ILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSK 191
Query: 299 GVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGI 358
G ++VFA+GNG GDNC DGY NSIY+I I + P YSE C+ ++A YS G
Sbjct: 192 GAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGS 251
Query: 359 SDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREP 418
+ I ++D++ C+ H GTSAAAP+AAGV L LEANPN+TWRD Q++ ++
Sbjct: 252 GE--YIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLE 309
Query: 419 LSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSY 478
+ W +A + YGFG I+ KL+ ++K W NV AQ + S + S
Sbjct: 310 KNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENVNAQTWFYLPTLYVSQSTNST 369
Query: 479 ASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQ 538
+ + I+ S K +EHV T++I+ RG ++L +P+G+ S L RP+
Sbjct: 370 EETLESVITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVRPR 429
Query: 539 DDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDT 571
D GF DW+ +++ HWGE+ VG+WK ++ T
Sbjct: 430 DVSSEGFKDWTFMSVAHWGENGVGDWKIKVKTT 462
|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 | Back alignment and structure |
|---|
Score = 436 bits (1121), Expect = e-148
Identities = 193/458 (42%), Positives = 273/458 (59%), Gaps = 12/458 (2%)
Query: 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIK 178
TD +P QWY LS ++ DLN+ + + G G+ + I+DDG+E H D+
Sbjct: 5 EPTDPKFPQQWY-----LSGVTQ-RDLNVKEAWAQ-GFTGHGIVVSILDDGIEKNHPDLA 57
Query: 179 DSFAPELSYNFNAEKWDITPRYEDP-RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGV 237
++ P S++ N + D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV
Sbjct: 58 GNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGV 117
Query: 238 KLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQG 297
++LDGE TD +E+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G
Sbjct: 118 RMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGG 177
Query: 298 KGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG 357
G +FV+A+GNG D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G
Sbjct: 178 LGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSG 237
Query: 358 ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSERE 417
+ +I+TTD+ CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+
Sbjct: 238 NQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPA 297
Query: 418 PLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFS 477
L+ W N +YG+GL++ +V+LA+NW V Q KC + + V
Sbjct: 298 HLNA-DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGK 356
Query: 478 YASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRP 537
+T C + + LEHV A L + + RRGD+ I L +P G +S L+ RP
Sbjct: 357 RLEV---RKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARP 413
Query: 538 QDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTKYDG 575
D GF DW+ +T W EDP GEW EI +T
Sbjct: 414 HDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEAN 451
|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 76/308 (24%), Positives = 119/308 (38%), Gaps = 72/308 (23%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
G+ V + +ID G++ +H D+K + + + T ++D N HGT A
Sbjct: 18 SQGYTGSNVKVAVIDSGIDSSHPDLKVA----GGASMVPSE---TNPFQD-NNSHGTHVA 69
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSW 267
G V NNS +GV A + VK+L G+ + +I +++ + +D+ + S
Sbjct: 70 G-TVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIIN--GIEWAIANNMDVINMSL 126
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC------AADGY 321
G P ++ AA+D+ + GV+ V AAGN +G +
Sbjct: 127 GGPSGSAALK-------AAVDKAVA-----SGVVVVAAAGNEGTSGSSSTVGYPGKYPS- 173
Query: 322 INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTCE 376
IA+ + Q +S S G + P V I +T N
Sbjct: 174 -----VIAVGAVDSSNQRASFS-----------SVGPELDVMAPGVSIQSTLPGNK-YGA 216
Query: 377 HSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS 436
++GTS A+P AG AL L +PN T + L E L
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSL---------------ENTTTKLGDSF 261
Query: 437 AYGFGLIN 444
YG GLIN
Sbjct: 262 YYGKGLIN 269
|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 3e-28
Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 49/310 (15%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+G+NI ++D G+ +H D+ ++ +F I D RN HGT AG +
Sbjct: 25 GSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPINNSCTD-RNGHGTHVAGTALA 81
Query: 218 KPNNSKCGV-GVCYGARVGGVKLLD----GETTDLIESKALQF------GLDKVDIYSGS 266
+ + G+ GV A + K+L G + D+ A++ I S S
Sbjct: 82 DGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAA--AIRHAADQATATGTKTIISMS 139
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIY 326
G + + +A++ KGVL V AAGN Y+ G + +
Sbjct: 140 LGSSANNSLIS-------SAVNYAYS-----KGVLIVAAAGNSGYSQGTIGYPGALPNAI 187
Query: 327 TIAIASAREDGQSPF----YSEECTGLIATAYSGGISDP--------VKIITTDVHNTCT 374
+A A + YS G I+TA I + + +T +N
Sbjct: 188 AVA-ALENVQQNGTYRVADYS--SRGYISTAGDYVIQEGDIEISAPGSSVYST-WYNGGY 243
Query: 375 CEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWF 434
SGTS A P +G+ A NP+++ + L ++ + G D
Sbjct: 244 NTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIG-DD--- 299
Query: 435 HSAYGFGLIN 444
A GFG
Sbjct: 300 -YASGFGFAR 308
|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-27
Identities = 71/409 (17%), Positives = 119/409 (29%), Gaps = 73/409 (17%)
Query: 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGT 209
+ G G + + D G++ D A + N HGT
Sbjct: 13 AQSSYGLYGQGQIVAVADTGLDTGRNDSSM--HEAFRGKITALYALGRTNNANDTNGHGT 70
Query: 210 RCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLD-----KVDIYS 264
AG ++ + +K G+ A + ++D LQ I++
Sbjct: 71 HVAGSVLGNGSTNK---GMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHT 127
Query: 265 GSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINS 324
SWG +G S+ D +R+ + +FAAGN NG +A G +
Sbjct: 128 NSWGAAVNG----AYTTDSRNV-DDYVRK----NDMTILFAAGNEGPNGGTISAPG--TA 176
Query: 325 IYTIAIASAREDGQSPFYSEECTGLIATAYSGG-----ISDP------VKIITTDVHNTC 373
I + + S + +A S G P I++
Sbjct: 177 KNAITVGATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAP 236
Query: 374 TCEH-----------SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
GTS A PI AG +A E + L +
Sbjct: 237 DSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI------ 290
Query: 423 SGWERNARDLW---FHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYA 479
A D+ + G+G + K +++A V S+ S +
Sbjct: 291 ----AGAADIGLGYPNGNQGWGRVTLDKSLNVAY----------------VNESSSLSTS 330
Query: 480 SSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGV 528
SF T + A+ D+ + +TAP+G
Sbjct: 331 QKATYSFTATA-GKPLKISLVWSDAPASTTASVTLVNDLDLVITAPNGT 378
|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-27
Identities = 64/305 (20%), Positives = 114/305 (37%), Gaps = 67/305 (21%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
+G I +ID G++YTH D+ Y+F +D N HGT AG
Sbjct: 30 SSGQEIAVIDTGVDYTHPDLDGKVIK--GYDFVDNDYDPMDL-----NNHGTHVAGIAAA 82
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDK-VDIYSGSWGPPDD 272
+ NN+ G+ R+ V+ LD G +D+ + A+ + D ++ + S G
Sbjct: 83 ETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIAD--AIIYAADSGAEVINLSLGCDCH 140
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY-INSIYTIAIA 331
+++ A++ KG + V AAGN + + + IA+
Sbjct: 141 TTTLE-------NAVNYAWN-----KGSVVVAAAGN-----NGSSTTFEPASYENVIAVG 183
Query: 332 SAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTCEHSGTSAAAPI 386
+ + + +S + G + P V I++T N SGTS A+P
Sbjct: 184 AVDQYDRLASFS-----------NYGTWVDVVAPGVDIVSTITGNR-YAYMSGTSMASPH 231
Query: 387 AAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS-AYGFGLINT 445
AG+ AL + + + E+ A + + +G IN+
Sbjct: 232 VAGLAALLASQGR--NNIEIRQAI---------------EQTADKISGTGTYFKYGRINS 274
Query: 446 FKLVS 450
+ V+
Sbjct: 275 YNAVT 279
|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-27
Identities = 70/309 (22%), Positives = 113/309 (36%), Gaps = 75/309 (24%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
GA V + ++D G++ +H D+ +F A + D N HGT A
Sbjct: 18 AQGFKGANVKVAVLDTGIQASHPDLNVV----GGASFVAGEAY----NTD-GNGHGTHVA 68
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSW 267
G V +N+ +GV + VK+L+ G + ++ +++ +D+ + S
Sbjct: 69 G-TVAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVS--GIEWATTNGMDVINMSL 125
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIY- 326
G +M A+D +GV+ V AAGN G N+I
Sbjct: 126 GGASGSTAMK-------QAVDNAYA-----RGVVVVAAAGNS-------GNSGSTNTIGY 166
Query: 327 ------TIAIASAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTC 375
IA+ + + +S S G + P + +T NT
Sbjct: 167 PAKYDSVIAVGAVDSNSNRASFS-----------SVGAELEVMAPGAGVYSTYPTNT-YA 214
Query: 376 EHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFH 435
+GTS A+P AG AL L +PN++ ++ L A L
Sbjct: 215 TLNGTSMASPHVAGAAALILSKHPNLSASQVRNRL---------------SSTATYLGSS 259
Query: 436 SAYGFGLIN 444
YG GLIN
Sbjct: 260 FYYGKGLIN 268
|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 66/307 (21%), Positives = 104/307 (33%), Gaps = 71/307 (23%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216
G+G I I+D G++ H D+ ++F D ++ N HGT CAG
Sbjct: 28 EGSGAKIAIVDTGVQSNHPDLAGKVVG--GWDF----VDNDSTPQN-GNGHGTHCAGIAA 80
Query: 217 MKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDK-VDIYSGSWGPPD 271
NNS G A + V++LD G T + + + D+ + S S G
Sbjct: 81 AVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVAN--GITYAADQGAKVISLSLGGTV 138
Query: 272 DGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN-----CAADGYINSIY 326
+ A++ KG + V AAGN G+
Sbjct: 139 GNSGLQ-------QAVNYAWN-----KGSVVVAAAGN---AGNTAPNYPAYYSN------ 177
Query: 327 TIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHSGTSAA 383
IA+AS ++ +S + A P I +T +T SGTS A
Sbjct: 178 AIAVASTDQNDNKSSFSTYGSWVDVAA---------PGSSIYSTYPTST-YASLSGTSMA 227
Query: 384 APIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFH-SAYGFGL 442
P AGV L + + + + E A + + + G
Sbjct: 228 TPHVAGVAGLLASQGR--SASNIRAAI---------------ENTADKISGTGTYWAKGR 270
Query: 443 INTFKLV 449
+N +K V
Sbjct: 271 VNAYKAV 277
|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-26
Identities = 75/423 (17%), Positives = 139/423 (32%), Gaps = 83/423 (19%)
Query: 131 EQDYRLSNSSKKLDLN------IVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
++DY + + + L+ + L +G+G+ I IID G++ +H D++
Sbjct: 105 QEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQGKVIG- 163
Query: 185 LSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGV-GVCYGARVGGVKLLD-- 241
+F K D N HGT A S G+ GA++ G+K+L+
Sbjct: 164 -WVDFVNGKTT----PYD-DNGHGTHVASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQ 217
Query: 242 --GETTDLIESKALQFGLDK-----VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREG 294
G +D+I + + + + + + S G D ++ + +
Sbjct: 218 GSGSISDIIN--GVDWAVQNKDKYGIKVINLSLGSSQSSDGTD--------SLSQAVNNA 267
Query: 295 RQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTG-LIATA 353
G++ V AAGN + + I + + + +S G
Sbjct: 268 WD-AGLVVVVAAGN--SGPNKYTVGSPAAASKVITVGAVDKYDVITDFS--SRGPTADNR 322
Query: 354 YSGGISDP-VKIITTDVHNTCTCEH--------SGTSAAAPIAAGVLALALEANPNMTWR 404
+ P II T + GT+ A P AG+ AL L+A+P+ T
Sbjct: 323 LKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPD 382
Query: 405 DCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKC 464
+ L T+ + + + AYG G +N +K
Sbjct: 383 KVKTALIETA--DIVKPDEIAD---------IAYGAGRVNAYKAAYYD------------ 419
Query: 465 EIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTA 524
+ + S S F I+ + + D+ + L
Sbjct: 420 -NYAKLTFTGYVSNKGSQSHQFTISGAGFVTATLYW-----------DNSGSDLDLYLYD 467
Query: 525 PSG 527
P+G
Sbjct: 468 PNG 470
|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 9e-26
Identities = 67/317 (21%), Positives = 108/317 (34%), Gaps = 58/317 (18%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
+ GAG I +ID G + H D+ + N + + D N HGT A
Sbjct: 35 RASAKGAGQIIGVIDTGCQVDHPDLAERIIG--GVNLTTDYGGDETNFSD-NNGHGTHVA 91
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIES-----KALQFGLDKVDIY 263
G V VGV A + +K L GE + ++ +++ I
Sbjct: 92 G-TVAAAETGSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRII 150
Query: 264 SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY-- 321
+ S G P D + + A+ + V V AAGN ++ Y
Sbjct: 151 TMSLGGPTDSEELH-------DAVKYAVS-----NNVSVVCAAGNEGDGREDTNEFAYPA 198
Query: 322 -INSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHS 378
N + + A + S F + E ++A P V I +T ++ E S
Sbjct: 199 AYNEVIAVG-AVDFDLRLSDFTNTNEEIDIVA---------PGVGIKST-YLDSGYAELS 247
Query: 379 GTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE--REPLSHVSGWERNARDL---W 433
GT+ AAP AG LAL + + R + L R A +
Sbjct: 248 GTAMAAPHVAGALALIINLAEDAFKRS------LSETEIYAQL------VRRATPIGFTA 295
Query: 434 FHSAYGFGLINTFKLVS 450
GF ++ + ++
Sbjct: 296 QAEGNGFLTLDLVERIT 312
|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 64/330 (19%), Positives = 113/330 (34%), Gaps = 72/330 (21%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGE 214
+ + + + ++D G++Y H D+ + A + + ++ + D N HGT G
Sbjct: 27 SVSVIQVAVLDTGVDYDHPDLAANIAW----CVSTLRGKVSTKLRDCADQNGHGTHVIGT 82
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE-------------------SK 251
+ NN VGV G ++ V++LD G +D+
Sbjct: 83 IAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGII 141
Query: 252 ALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKY 311
A D ++ S S G P D + I + G++ V A+GN
Sbjct: 142 AGDPDDDAAEVISMSLGGPADDSYLY-------DMIIQAY-----NAGIVIVAASGN--- 186
Query: 312 NGDNCAADGY-INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDV 369
+ + Y IA+ + + +S +S P V I++T
Sbjct: 187 --EGAPSPSYPAAYPEVIAVGAIDSNDNIASFS---------NRQPEVSAPGVDILST-Y 234
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA--WTSE--REPLSHVSGW 425
+ GT+ A P +GV+AL A + + R L
Sbjct: 235 PDDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL------ 288
Query: 426 ERNARDLW---FHSAYGFGLINTFKLVSLA 452
A DL + + YG+G++ V A
Sbjct: 289 HITADDLGPTGWDADYGYGVVRAALAVQAA 318
|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-24
Identities = 63/299 (21%), Positives = 114/299 (38%), Gaps = 70/299 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+GV + ++D G+ TH D+ +F + +D N HGT AG +
Sbjct: 23 GSGVKVAVLDTGI-STHPDLNIR----GGASFVPGEPS----TQD-GNGHGTHVAG-TIA 71
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSWGPPDD 272
NNS +GV A + VK+L G + + + L++ + + + + S G P
Sbjct: 72 ALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQ--GLEWAGNNGMHVANLSLGSPSP 129
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC----AADGYINSIYTI 328
+++ A++ +GVL V A+GN + +
Sbjct: 130 SATLE-------QAVNSATS-----RGVLVVAASGNS--GAGSISYPARYAN------AM 169
Query: 329 AIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHSGTSAAAP 385
A+ + ++ +S+ ++A P V + +T + +GTS A P
Sbjct: 170 AVGATDQNNNRASFSQYGAGLDIVA---------PGVNVQST-YPGSTYASLNGTSMATP 219
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
AG AL + NP+ + ++ L + A L + YG GL+N
Sbjct: 220 HVAGAAALVKQKNPSWSNVQIRNHL---------------KNTATSLGSTNLYGSGLVN 263
|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-24
Identities = 69/361 (19%), Positives = 117/361 (32%), Gaps = 73/361 (20%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGEL 215
G + + ++D G++ TH D++ Y + + P D GT AG +
Sbjct: 153 GTNIIVAVVDTGVDGTHPDLEGQVIA--GYRPAFD--EELPAGTDSSYGGSAGTHVAGTI 208
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD--------GETTDLIESKALQFGLDK-VDIYSGS 266
K + K VGV GA++ + + D G D + + + D + + S
Sbjct: 209 AAK-KDGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHS 267
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC---AADGYIN 323
WG G K A D + GV+ V +AGN + + G
Sbjct: 268 WG-------GWGYSYTMKEAFDYAME-----HGVVMVVSAGNNTSDSHHQYPAGYPG--- 312
Query: 324 SIYTIAIASAREDGQSP---FYSEECTGL----------IATAYSGGISDPVKIITTDVH 370
I +A+ G + +S I + G S + +V
Sbjct: 313 ---VIQVAALDYYGGTFRVAGFS--SRSDGVSVGAPGVTILSTVPGEDSIGYEGHNENVP 367
Query: 371 NTCTCEH---SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
T + GTS AAP GV+A+ L+ PN + +L E
Sbjct: 368 ATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLL---------------EN 412
Query: 428 NARDLW---FHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQR 484
A D + G+GL+ + + + + G+ + S R
Sbjct: 413 TAFDFNGNGWDHDTGYGLVKLDAALQGPLPTQGGVEEFQVVVTDAKGNFGVPTVFVSMMR 472
Query: 485 S 485
Sbjct: 473 D 473
|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 63/329 (19%), Positives = 113/329 (34%), Gaps = 70/329 (21%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGE 214
+ + + + ++D G++Y H D+ + A + + ++ + D N HGT G
Sbjct: 102 SVSVIQVAVLDTGVDYDHPDLAANIAW----CVSTLRGKVSTKLRDCADQNGHGTHVIGT 157
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE-------------------SK 251
+ NN VGV G ++ V++LD G +D+
Sbjct: 158 IAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGII 216
Query: 252 ALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKY 311
A D ++ S S G P D + I + G++ V A+GN
Sbjct: 217 AGDPDDDAAEVISMSLGGPADDSYLY-------DMIIQAYN-----AGIVIVAASGNE-- 262
Query: 312 NGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVH 370
+ + + + A D + F + +S P V I++T
Sbjct: 263 GAPSPSYPAAYPEVIAVG-AIDSNDNIASFSN----------RQPEVSAPGVDILSTYPD 311
Query: 371 NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA--WTSE--REPLSHVSGWE 426
++ GT+ A P +GV+AL A + + R L
Sbjct: 312 DS-YETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL------H 364
Query: 427 RNARDLW---FHSAYGFGLINTFKLVSLA 452
A DL + + YG+G++ V A
Sbjct: 365 ITADDLGPTGWDADYGYGVVRAALAVQAA 393
|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 61/369 (16%), Positives = 106/369 (28%), Gaps = 74/369 (20%)
Query: 121 TDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS 180
WY + + L V + ++D G+ +
Sbjct: 17 ASARAEKPWY-----FDA------IGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSE 65
Query: 181 FAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGV-GVCYGARVGGVKL 239
FA ++F + + + HGT A + S+ G+ GV A + ++
Sbjct: 66 FA---KFSFTQDGSPFPVKKSEALYIHGTAMASLIA-----SRYGIYGVYPHALISSRRV 117
Query: 240 LD----GETTDLIES-KALQFGLDK-VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293
+ IES + F I + S G K + ++ G
Sbjct: 118 IPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGG----QKGVASASVWTELLSRMGRN- 172
Query: 294 GRQGKGVLFVFAAGNGKYNGDNCAAD---------------GYINSIYTIAIASAREDGQ 338
L V A GN + +A + + +A A A+
Sbjct: 173 ----NDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVA-ALAQYRKG 227
Query: 339 SPFYSEECTGLIATAYSGGISDP------VKIITTDVHNTCTCEHSGTSAAAPIAAGVLA 392
G T G + I T SGTS A I +GVLA
Sbjct: 228 ETPVLH---GGGITGSRFGNNWVDIAAPGQNITFLRPDAK-TGTGSGTSEATAIVSGVLA 283
Query: 393 LALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLA 452
NP T + + L ++++ P + D ++N K +S+
Sbjct: 284 AMTSCNPRATATELKRTLLESADKYP---------SLVDKV----TEGRVLNAEKAISMF 330
Query: 453 KNWVNVPAQ 461
+P +
Sbjct: 331 CKKNYIPVR 339
|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 2e-22
Identities = 54/346 (15%), Positives = 109/346 (31%), Gaps = 73/346 (21%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKD-------SFAPELSYNFNAEKWDITPRYEDPRNKHGTR 210
A I IID G+ H+D+K+ + P + + + R HGT
Sbjct: 145 HANTKIAIIDTGVMKNHDDLKNNFSTDSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTM 204
Query: 211 CAGELVMKPNNSKCGVGVCYGARVGGVKLLD---GETTDLIESKALQFGLD-KVDIYSGS 266
+G+ N K +GV + ++ E + + A+ + + + S
Sbjct: 205 VSGQTS---ANGK-LIGVAPNNKFTMYRVFGSKKTELLWVSK--AIVQAANDGNQVINIS 258
Query: 267 WG-----PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY 321
G +D ++ K+ A+ + I ++ K + V AAGN + ++
Sbjct: 259 VGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKK-KKSIVVAAAGNDGIDVNDKQKLKL 317
Query: 322 INSIYT--------------IAIASAREDGQSPFYS-----------------EECTGLI 350
+ + S + +S +
Sbjct: 318 QREYQGNGEVKDVPASMDNVVTVGSTDQKSNLSEFSNFGMNYTDIAAPGGSFAYLNQFGV 377
Query: 351 ATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA-NPNMTWRDCQHI 409
+ G I+TT + +GT+ A P +G LAL ++ + +
Sbjct: 378 DKWMNEGYMHKENILTTANNGR-YIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIEL 436
Query: 410 LAWTSEREPLSHVSGWERNARDLW--FHSAYGFGLINTFKLVSLAK 453
L ++ S YG G ++ +K +++A
Sbjct: 437 L---------------YQHGTSKNNKPFSRYGHGELDVYKALNVAN 467
|
| >1kn6_A Prohormone convertase 1; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Mus musculus} SCOP: d.58.3.3 Length = 90 | Back alignment and structure |
|---|
Score = 90.4 bits (224), Expect = 3e-22
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 2 HVGVERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPE 61
H F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 2 HHHHHHKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRR 61
Query: 62 ETTFETVGLLNDARVIWTQQQFAKHLRKR 90
T L +D RV W +QQ+ K KR
Sbjct: 62 SALHITKRLSDDDRVTWAEQQYEKERSKR 90
|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 9e-22
Identities = 71/389 (18%), Positives = 120/389 (30%), Gaps = 112/389 (28%)
Query: 122 DEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSF 181
D+ + QW+ + + V+ ++ G V + ++D G+ H D+ +
Sbjct: 4 DQHYREQWH-----YFDRY---GVKADKVW-DMGFTGQNVVVAVVDTGI-LHHRDLNANV 53
Query: 182 APELSYNF-------------------------NAEKWDITPRYEDPR--NKHGTRCAGE 214
P Y+F N ++ + HG+ AG
Sbjct: 54 LP--GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGT 111
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD---GETTDLIE---------SKALQFGLDKVDI 262
+ NN GV YGA+V V+ L G +D+ + + + +
Sbjct: 112 IAAVTNNRIGVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRNPAKV 171
Query: 263 YSGSWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD 319
+ S G G+ S IDR G L V AAGN N N
Sbjct: 172 INMSLG---------SDGQCSYNAQTMIDRAT-----RLGALVVVAAGNENQNASNTWPT 217
Query: 320 GYINSIYTIAIASAREDGQSPFYSEECTGL----------IATAYSGGISDPVKIITTDV 369
N +++ + G +S G+ I + G PV
Sbjct: 218 SCNN---VLSVGATTSRGIRASFS--NYGVDVDLAAPGQDILSTVDSGTRRPV------- 265
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALAL----EANPNMTWRDCQHILAWTSEREPLSHVSGW 425
+ +GTS A P +GV AL + N N+T + + +L
Sbjct: 266 -SDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVL--------------- 309
Query: 426 ERNARDL--WFHSAYGFGLINTFKLVSLA 452
A G G+++ V+
Sbjct: 310 VSTTSPFNGRLDRALGSGIVDAEAAVNSV 338
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 | Back alignment and structure |
|---|
Score = 96.1 bits (238), Expect = 1e-20
Identities = 85/567 (14%), Positives = 177/567 (31%), Gaps = 96/567 (16%)
Query: 20 SGDPDIANQVAQDLGFHYNGIINGLDNHYL---------FSKKQHNHKTPEETTFETVGL 70
GD D+ +V D NG I GL + L + + + ++ + +
Sbjct: 74 CGDVDMKKKVTPD----ENGNIKGLSGNSLKLSPELMALNTDPEKAVRVGLKSFSDLLPS 129
Query: 71 LNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWY 130
++ + + R++ E + D+ +
Sbjct: 130 KVRNNIVAQAKLKHWDKPHKTATANASRKIVEFESQNPGEASK-----LPWDKKILKENL 184
Query: 131 EQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDD---------------GMEYTHE 175
+ + + NS +K+ +I Y + A + I+D +
Sbjct: 185 DFELEMLNSYEKVYGDIKTSYDCILFPTADGWLTIVDTTEQGDLDQALRIGEYSRTHETR 244
Query: 176 DIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVG 235
++ D + S N + E + + HGT + ++ GV A++
Sbjct: 245 NVDDFLSI--SVNVHDEGNVLEVVGMS--SPHGTHVSSIASGNHSSRDV-DGVAPNAKIV 299
Query: 236 GVKLLDGE------TTDLIESKALQFGLD------KVDIYSGSWGPPDDGKSMDGPGKLS 283
+ + DG T L+ +A+ ++ ++D+ + S+G + + G+L
Sbjct: 300 SMTIGDGRLGSMETGTALV--RAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELM 357
Query: 284 KAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAI-ASAREDGQSPFY 342
+++ GV++V +AGN I+ I + A Y
Sbjct: 358 NEVVNK--------YGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY 409
Query: 343 S--EECTGLIATAYSGG----------ISDP-VKIITTDVHNTCTCEH-SGTSAAAPIAA 388
+ E+ G + T S + P I + + +GTS AAP A
Sbjct: 410 AMREKLPGNVYTWTSRDPCIDGGQGVTVCAPGGAIASVPQFTMSKSQLMNGTSMAAPHVA 469
Query: 389 GVLALALEA----NPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
G +AL + N + + ++ T+ L +V + G GL+N
Sbjct: 470 GAVALLISGLKQQNIEYSPYSIKRAISVTA--TKLGYVDPFA-----------QGHGLLN 516
Query: 445 TFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHV 504
K ++ VG++ R D ++ + +
Sbjct: 517 VEKAFEHLTEHRQSKDNML-RFSVRVGNNADKGIHL---RQGVQRNSIDYNVYIEPIFYN 572
Query: 505 HATLNIEHPRRGDVRIELTAPSGVKSV 531
+ + +VR+ L A
Sbjct: 573 DKEADPKDKFNFNVRLNLIASQPWVQC 599
|
| >4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 1e-19
Identities = 54/320 (16%), Positives = 94/320 (29%), Gaps = 69/320 (21%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCA 212
I D G++ ++ + P +D N H
Sbjct: 87 TPEDYAAFQSIRDQGLKGKEKEEAL--------------EAVIPDTKDRIVLNDHACHVT 132
Query: 213 GELVMKPNNSKCGV-GVCYGARVGGVKLL---DGETTDLIESKALQFGLD-----KVDIY 263
+V + ++ V G+ RV + G D++ L +D +I
Sbjct: 133 STIVGQEHS---PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANII 189
Query: 264 SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AA 318
++ ++ AI + VL V GN N +
Sbjct: 190 HCAFC---RPTQTSEGEEILVQAIKKCQD-----NNVLIVSPTGN---NSNESWCLPAVL 238
Query: 319 DGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCEH 377
G T+A+ +A+ DG +S G T GI P +I+
Sbjct: 239 PG------TLAVGAAKVDGTPCHFS--NWGGNNTKE--GILAPGEEILGAQPCTEEPVRL 288
Query: 378 SGTSAAAPIAAGVLALAL----EANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433
+GTS AAP+ G+ AL + + + + L T+ P E R
Sbjct: 289 TGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTA--IPCD-PEVVEEPER--- 342
Query: 434 FHSAYGFGLINTFKLVSLAK 453
G +N + +
Sbjct: 343 ----CLRGFVNIPGAMKVLF 358
|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 | Back alignment and structure |
|---|
Score = 83.9 bits (207), Expect = 5e-17
Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 57/276 (20%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAP--ELSYNFNAEKWDITPRYEDPR--NKHGTRCAG 213
G+ V + ++D ++ H + ++ N + D T + + HGT AG
Sbjct: 177 GSLVEVYLLDTSIQSDHRE----IEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAG 232
Query: 214 ELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKV--DIYSGSW 267
+ + GV GA + +++L+ G + + GL+ +
Sbjct: 233 VVSGR------DAGVAKGASMRSLRVLNCQGKGTVSGTLI------GLEFIRKSQLVQPV 280
Query: 268 GPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYIN 323
GP + G S+ A R R GV+ V AAGN + D C
Sbjct: 281 GP--LVVLLPLAGGYSRVLNAACQRLAR-----AGVVLVTAAGN--FRDDACLYSPASAP 331
Query: 324 SIYTIAIASAREDGQSPFYSEE-----CTGLIATAYSGGISDP-VKIITTDVH-NTCTCE 376
+ T+ A+ +D + C L A P II +TC
Sbjct: 332 EVITVG-ATNAQDQPVTLGTLGTNFGRCVDLFA---------PGEDIIGASSDCSTCFVS 381
Query: 377 HSGTSAAAPIAAGVLALALEANPNMTWRD-CQHILA 411
SGTS AA AG+ A+ L A P +T + Q ++
Sbjct: 382 QSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIH 417
|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 2e-16
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 65/280 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAP--ELSYNFNAEKWDITPRYEDPR--NKHGTRCAG 213
G+ V + ++D ++ H + ++ N + D T + + HGT AG
Sbjct: 25 GSLVEVYLLDTSIQSDHRE----IEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAG 80
Query: 214 ELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKV--DIYSGSW 267
+ + GV GA + +++L+ G + + GL+ +
Sbjct: 81 VVSGR------DAGVAKGASMRSLRVLNCQGKGTVSGTLI------GLEFIRKSQLVQPV 128
Query: 268 GPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AAD 319
GP + G S+ A R R GV+ V AAGN + D C +A
Sbjct: 129 GP--LVVLLPLAGGYSRVLNAACQRLAR-----AGVVLVTAAGN--FRDDACLYSPASAP 179
Query: 320 GYINSIYTIAIASAREDGQSPFYSEE-----CTGLIATAYSGGISDP-VKIITTDVH-NT 372
I T+ A+ +D + C L A P II +T
Sbjct: 180 EVI----TVG-ATNAQDQPVTLGTLGTNFGRCVDLFA---------PGEDIIGASSDCST 225
Query: 373 CTCEHSGTSAAAPIAAGVLALALEANPNMTWRD-CQHILA 411
C SGTS AA AG+ A+ L A P +T + Q ++
Sbjct: 226 CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIH 265
|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 7e-16
Identities = 67/259 (25%), Positives = 97/259 (37%), Gaps = 59/259 (22%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G GV +ID G+ HE+ F ++ D D N HGT AG +
Sbjct: 28 GFGVTAYVIDTGVNNNHEE----FGGRSVSGYDFVDNDADS--SD-CNGHGTHVAGTIGG 80
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-------KVDIYSGS 266
GV + GV++L G T+ +I G+D + + S
Sbjct: 81 S------QYGVAKNVNIVGVRVLSCSGSGTTSGVIS------GVDWVAQNASGPSVANMS 128
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYINSI 325
G ++D +A+ I+ GV F+ AAGN N D C + S
Sbjct: 129 LGGGQS-TALD-------SAVQGAIQ-----SGVSFMLAAGNS--NADACNTSPARVPSG 173
Query: 326 YTIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAA 383
T+ ++ D +S F S C L A P I + ++ SGTS A
Sbjct: 174 VTVG-STTSSDSRSSF-SNWGSCVDLFA---------PGSQIKSAWYDGGYKTISGTSMA 222
Query: 384 APIAAGVLALALEANPNMT 402
P AGV AL L+ N +T
Sbjct: 223 TPHVAGVAALYLQENNGLT 241
|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 71/274 (25%), Positives = 101/274 (36%), Gaps = 68/274 (24%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFN--AEK-WDITPRYEDPRNKHGTRCAGE 214
G GVN+ +ID G+ TH + F A +D N HGT AG
Sbjct: 30 GRGVNVYVIDTGIRTTHRE------------FGGRARVGYDALGGNGQDCNGHGTHVAGT 77
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWGPP 270
+ GV + V++LD G T+ +I G+D W
Sbjct: 78 IGGV------TYGVAKAVNLYAVRVLDCNGSGSTSGVIA------GVD--------WVTR 117
Query: 271 DDGK----SMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYI 322
+ + +M G +S A A+ I GV++ AAGN N + C +
Sbjct: 118 NHRRPAVANMSLGGGVSTALDNAVKNSIA-----AGVVYAVAAGN--DNANACNYSPARV 170
Query: 323 NSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDP-VKIITTDVH-NTCTCEHSG 379
T+ A+ D ++ F + C L A P I + +T T +G
Sbjct: 171 AEALTVG-ATTSSDARASFSNYGSCVDLFA---------PGASIPSAWYTSDTATQTLNG 220
Query: 380 TSAAAPIAAGVLALALEANPNMTWRD-CQHILAW 412
TS A P AGV AL LE NP+ T IL
Sbjct: 221 TSMATPHVAGVAALYLEQNPSATPASVASAILNG 254
|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 4e-15
Identities = 68/262 (25%), Positives = 103/262 (39%), Gaps = 63/262 (24%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFA--PELSYNFNAEKWDITPRYEDPRNKHGTRCAGEL 215
G+GV +ID G+ TH + F Y+F +D D N HGT AG +
Sbjct: 30 GSGVTAFVIDTGVLNTHNE----FGGRASSGYDFIDNDYD----ATD-CNGHGTHVAGTI 80
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD---KVDIYSGSWG 268
GV V GV++L+ G + +I + + + + + S G
Sbjct: 81 GGS------TYGVAKNVNVVGVRVLNCSGSGSNSGVI--AGINWVKNNASGPAVANMSLG 132
Query: 269 PPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYINS 324
G S+A A++ + G+ FV AAGN N + C
Sbjct: 133 -----------GGASQATDDAVNAAVA-----AGITFVVAAGND--NSNACNYSPARAAD 174
Query: 325 IYTIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDV-HNTCTCEHSGT 380
T+ ++ D +S F S C + A P I ++ N+ T SGT
Sbjct: 175 AITVG-STTSNDSRSSF-SNYGTCLDIYA---------PGSSITSSWYTSNSATNTISGT 223
Query: 381 SAAAPIAAGVLALALEANPNMT 402
S A+P AGV AL L+ NPN++
Sbjct: 224 SMASPHVAGVAALYLDENPNLS 245
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 43/270 (15%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
+ I IID G + +H D+ + N + P N HGT AG
Sbjct: 18 DSQAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQP---GNNNAHGTHVAGT 72
Query: 215 LVMKPNNSKC-GVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD--KVDIYSGSW 267
+ NN GV A + VK+ + G ++ L+ A+ ++ ++ + S
Sbjct: 73 IAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLV--AAIDTCVNSGGANVVTMSL 130
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AADGYI 322
G G + A++ GVL + AAGN GD+ + D
Sbjct: 131 G-------GSGSTTTERNALNTHY-----NNGVLLIAAAGN---AGDSSYSYPASYDS-- 173
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
+++A+ + +S+ + + I + +T G S
Sbjct: 174 ----VMSVAAVDSNLDHAAFSQYTDQVEISGPGEAI---LSTVTVGEGRLADITIGGQSY 226
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAW 412
+ L
Sbjct: 227 FSNGVVPHNRLTPSGTSYAPAPINASATGA 256
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 26/202 (12%), Positives = 48/202 (23%), Gaps = 33/202 (16%)
Query: 263 YSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYI 322
+ ++ G + + + + G + N G
Sbjct: 266 SFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDA 325
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
NS T+ S ++ + + +GTS
Sbjct: 326 NSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYY---------------NGTSM 370
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDL---WFHSAYG 439
A P +GV L +P + + L A DL + G
Sbjct: 371 ATPHVSGVATLVWSYHPECSASQVRAAL---------------NATADDLSVAGRDNQTG 415
Query: 440 FGLINTFKLVSLAKNWVNVPAQ 461
+G+IN + P
Sbjct: 416 YGMINAVAAKAYLDESCTGPTD 437
|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 4e-14
Identities = 65/272 (23%), Positives = 92/272 (33%), Gaps = 65/272 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFN--AEK-WDITPRYEDPRNKHGTRCAGE 214
G G + +ID G+E +H + F A+ D N HGT CAG
Sbjct: 30 GQGSCVYVIDTGIEASHPE------------FEGRAQMVKTYYYSSRD-GNGHGTHCAGT 76
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE------SKALQFGLDKVDIYS 264
+ + GV ++ GVK+LD G+ + +I S K + S
Sbjct: 77 VGSRT------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVAS 130
Query: 265 GSWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-G 320
S G G S + A R GV+ AAGN N D
Sbjct: 131 LSLG-----------GGYSSSVNSAAARLQS-----SGVMVAVAAGN--NNADARNYSPA 172
Query: 321 YINSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSG 379
S+ T+ AS R D +S F + + P I + T SG
Sbjct: 173 SEPSVCTVG-ASDRYDRRSSFSNYGSVLDIFG---------PGTDILSTWIGGSTRSISG 222
Query: 380 TSAAAPIAAGVLALALEANPNMTWRDCQHILA 411
TS A P AG+ A + C++I
Sbjct: 223 TSMATPHVAGLAAYLMTLGKTTAASACRYIAD 254
|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 5e-14
Identities = 66/271 (24%), Positives = 91/271 (33%), Gaps = 63/271 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFA--PELSYNFNAEKWDITPRYEDPRNKHGTRCAGEL 215
GAG + +ID G+E TH D F + ++ + D + HGT CAG +
Sbjct: 31 GAGACVYVIDTGVEDTHPD----FEGRAKQIKSYASTARD--------GHGHGTHCAGTI 78
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE------SKALQFGLDKVDIYSG 265
K GV + GVK+LD G +++I S + + S
Sbjct: 79 GSK------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASM 132
Query: 266 SWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GY 321
S G G S A A R GV AAGN N D
Sbjct: 133 SLG-----------GGYSAALNQAAARLQS-----SGVFVAVAAGND--NRDAANTSPAS 174
Query: 322 INSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380
++ T+ A+ D +S F + + A P IT+ T SGT
Sbjct: 175 EPTVCTVG-ATDSNDVRSTFSNYGRVVDIFA---------PGTSITSTWIGGRTNTISGT 224
Query: 381 SAAAPIAAGVLALALEANPNMTWRDCQHILA 411
S A P AG+ A C I
Sbjct: 225 SMATPHIAGLAAYLFGLEGGSAGAMCGRIQT 255
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 4e-04
Identities = 23/207 (11%), Positives = 58/207 (28%), Gaps = 30/207 (14%)
Query: 19 ISGDPDIANQVAQDLGFHY--NGIINGLDNHY---LFSK--KQHNHKTPEET------TF 65
+ + + ++ H + L L K P E
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 66 ETVG-LLNDARVIWTQQQFAKHLRKRAEIQ---------ELRRQLRAMSQIYRKETEVSK 115
+ + D W + + I+ E R+ +S ++ +
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPPSAHIP- 388
Query: 116 YEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHE 175
+ + W+ + + ++ K + P ++I + + + + H
Sbjct: 389 -TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
Query: 176 DIKDSFAPELSYNFNAEKWDITPRYED 202
I D + ++ + D+ P Y D
Sbjct: 448 SIVDHYNIPKTF----DSDDLIPPYLD 470
|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 5e-04
Identities = 35/221 (15%), Positives = 62/221 (28%), Gaps = 45/221 (20%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPEL----SYNFNAEKWDITPRYEDP 203
V QE GAG + +ID G + HE + + + + K + Y +
Sbjct: 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEW 65
Query: 204 RNK-------------------HGTRCAGELVMKPNNSKCG----VGVCYGARVG----- 235
N HGT +G L + G A++
Sbjct: 66 VNDKVAYYHDYSKDGKTAVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVE 125
Query: 236 GVKLLDGETTDLIES--KALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293
V L + ++ A+ + + S+G + +
Sbjct: 126 IVNGLADYARNYAQAIRDAIN---LGAKVINMSFG------NAALAYANLPDETKKAFDY 176
Query: 294 GRQGKGVLFVFAAGN-GKYNGDNCAADGYINSIYTIAIASA 333
+ KGV V +AGN + G + +A
Sbjct: 177 AKS-KGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAA 216
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 586 | |||
| 1p8j_A | 471 | Furin precursor; prohormone convertase, SPC1, PACE | 100.0 | |
| 2id4_A | 503 | Kexin; KEX2, kexin, furin, proprotein, prohormone, | 100.0 | |
| 3hjr_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 100.0 | |
| 2oxa_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 100.0 | |
| 3afg_A | 539 | Subtilisin-like serine protease; propeptide, therm | 100.0 | |
| 2z2z_A | 395 | TK-subtilisin precursor; thermococcus kodakaraensi | 100.0 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 100.0 | |
| 1dbi_A | 280 | AK.1 serine protease; hydrolase; 1.80A {Bacillus S | 100.0 | |
| 3t41_A | 471 | Epidermin leader peptide processing serine protea; | 100.0 | |
| 1thm_A | 279 | Thermitase; hydrolase(serine protease); 1.37A {The | 100.0 | |
| 2z30_A | 320 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 100.0 | |
| 3lpc_A | 340 | APRB2; protease, subtilase, virulence factor, hydr | 100.0 | |
| 1r0r_E | 274 | Subtilisin carlsberg; high resolution, serine prot | 100.0 | |
| 1to2_E | 281 | Subtilisin BPN'; serine protease, hydrolase; HET: | 100.0 | |
| 1gci_A | 269 | Subtilisin; hydrolase, serine protease; 0.78A {Bac | 100.0 | |
| 2iy9_A | 347 | SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col | 100.0 | |
| 2x8j_A | 327 | Intracellular subtilisin protease; hydrolase, seri | 100.0 | |
| 1wmd_A | 434 | Protease; alpha-beta hydrolase fold, jelly-roll be | 100.0 | |
| 2ixt_A | 310 | 36KDA protease; serine protease, sphericase, subti | 100.0 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 100.0 | |
| 4h6x_A | 357 | Thiazoline oxidase/subtilisin-like protease; hydro | 100.0 | |
| 2p4e_P | 692 | Proprotein convertase subtilisin/kexin type 9; pro | 100.0 | |
| 3zxy_A | 282 | Subtilisin-like protein; hydrolase; 1.58A {Prochlo | 100.0 | |
| 1sh7_A | 284 | Extracellular subtilisin-like serine proteinase; c | 100.0 | |
| 4h6w_A | 306 | N-terminal cyanobactin protease; hydrolase; 2.45A | 100.0 | |
| 2b6n_A | 278 | Proteinase K; S binding, substrate specificity, pr | 100.0 | |
| 4dzt_A | 276 | Aqualysin-1, aqualysin-I; serine protease, calcium | 100.0 | |
| 2pwa_A | 279 | Proteinase K; structure, alanine boronic acid, hyd | 100.0 | |
| 3i6s_A | 649 | Subtilisin-like protease; PA-domain, FN3-domain, h | 100.0 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 100.0 | |
| 2qtw_B | 546 | Proprotein convertase subtilisin/kexin type 9; cor | 100.0 | |
| 3f7m_A | 279 | Alkaline serine protease VER112; verticillium psal | 100.0 | |
| 3vta_A | 621 | Cucumisin; subtilisin-like fold, serine protease, | 100.0 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 100.0 | |
| 1t1e_A | 552 | Kumamolisin; proenzyme, prosubtilase, activation m | 99.91 | |
| 1ga6_A | 372 | Serine-carboxyl proteinase; serine-carboxyl protei | 99.87 | |
| 3edy_A | 544 | Tripeptidyl-peptidase 1; protease, TPP1, sedolisin | 99.06 | |
| 1kn6_A | 90 | Prohormone convertase 1; beta-alpha-beta-BETA-alph | 98.97 | |
| 3cnq_P | 80 | Subtilisin BPN'; uncleaved, proenzyme, substrate c | 98.21 | |
| 2qtw_A | 124 | Proprotein convertase subtilisin/kexin type 9 Pro; | 97.9 | |
| 2w2n_P | 114 | Proprotein convertase subtilisin/kexin type 9; hyd | 97.75 | |
| 1v5i_B | 76 | POIA1, IA-1=serine proteinase inhibitor; protease- | 97.58 | |
| 2z30_B | 65 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 96.66 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 85.67 |
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-88 Score=732.29 Aligned_cols=453 Identities=43% Similarity=0.797 Sum_probs=414.8
Q ss_pred CCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCC
Q psy5372 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITP 198 (586)
Q Consensus 119 ~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~ 198 (586)
.|+||+|.+||||++. ++.+|++.++|+ .+++|+||+|||||+|||..||||.+++....+|+|.+++.+|.|
T Consensus 5 ~p~Dp~~~~qW~l~~~------~~~~i~~~~aw~-~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~p~~ 77 (471)
T 1p8j_A 5 EPTDPKFPQQWYLSGV------TQRDLNVKEAWA-QGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQP 77 (471)
T ss_dssp CCCCTTGGGCTTTSCT------TSCSCCCHHHHH-TTCSCTTCEEEEEEBCCCTTCTTTGGGBCGGGCEETTTTBSCCCC
T ss_pred cCCCcChhhCcCCCCC------CccCCChHHHHh-cCCCCCCCEEEEEeCCcCCCChhHhhccCccCcccccCCCCCCCC
Confidence 4999999999999875 347899999999 999999999999999999999999999887778999998888877
Q ss_pred CCCC-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC
Q psy5372 199 RYED-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD 277 (586)
Q Consensus 199 ~~~~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~ 277 (586)
.+.. |.++|||||||+|+|..+|+.|+.||||+|+|+++|++++..+++++++.+++..++++|||||||....+...+
T Consensus 78 ~~~~~d~~gHGT~vAGiiaa~~~n~~g~~GvAp~a~i~~~rv~~g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~ 157 (471)
T 1p8j_A 78 RYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVD 157 (471)
T ss_dssp CCCTTCTTCHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECSSSCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCB
T ss_pred ccCCCCCCCcHHHHHHHHHeeccCCCCCEEECCCCeEEEEEccCCchhHHHHHHHhhhccCCCeEEEeccCcCCCCCccc
Confidence 6443 789999999999999988999999999999999999999999999999999988789999999999977666666
Q ss_pred CchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCC
Q psy5372 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG 357 (586)
Q Consensus 278 ~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~ 357 (586)
.+...+.+++.+++.++|+++|++||+||||+|...+.|+++.|+.++++|+|||++.++.+++||++|+..+..+++++
T Consensus 158 ~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~g~~a~~S~~g~~~~~~~~~~~ 237 (471)
T 1p8j_A 158 GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSG 237 (471)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTTSCCCTTCCBCTTCCEEEECCC
T ss_pred CcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCCCCcccccCCCCcceEEeCCCC
Confidence 67778889999999988777899999999999987777778888999999999999999999999999999998888888
Q ss_pred CCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCc
Q psy5372 358 ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437 (586)
Q Consensus 358 ~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~ 437 (586)
..++..|++++..+.+|..++|||||||+|||++|||++++|+|+++|||++|+.||++.+... ..|..|++|..++..
T Consensus 238 ~~~g~~i~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~-~~~~~n~~g~~~~~~ 316 (471)
T 1p8j_A 238 NQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA-DDWATNGVGRKVSHS 316 (471)
T ss_dssp STTSCCEEEEETTTEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC-SCCEECTTSCEEBTT
T ss_pred CCCCCCEEEeeCCCCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCC-CCceecCCCcccCCC
Confidence 8899999999887888999999999999999999999999999999999999999999998776 689999999989999
Q ss_pred ccccccCHHHHHHHHhccCCCCCcceeeeeeecCcceecCCCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccc
Q psy5372 438 YGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGD 517 (586)
Q Consensus 438 ~G~G~vna~~Av~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~ 517 (586)
||||+||+.+||++|+.|.+++++..|.... ......| ...+.++++++.|.+....+.++|||+|+++++|+++||
T Consensus 317 ~G~G~vda~~Av~~a~~~~~~~~~~~~~~~~-~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~i~h~~~gd 393 (471)
T 1p8j_A 317 YGYGLLDAGAMVALAQNWTTVAPQRKCIVEI-LVEPKDI--GKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGD 393 (471)
T ss_dssp TBTCBCCHHHHHHHHHTCCCCCCCEEEEEEE-ECSCEEC--TTEEEEEEEECCSTTSTTCCSEEEEEEEEEEEEESCGGG
T ss_pred CCCEEEcHhHHHHHhhccccCCcceEEEeec-cccceec--CceEEEEEeeccccccccceeEEEeEEEEEEEecCCCCc
Confidence 9999999999999999999999999987765 3344555 467888999999999888899999999999999999999
Q ss_pred eEEEEEcCCCCEEEeecCCCCCCCCCCcccceEeeeeecCCCCCceEEEEEEECC---CCCeeeEEEc
Q psy5372 518 VRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTK---YDGLLDFITR 582 (586)
Q Consensus 518 l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~---~~g~l~~~~~ 582 (586)
|+|+|+||+||++.|+..|..|.+..|+.+|+||+++||||++.|+|+|+|.|.. ..|.|+-.++
T Consensus 394 L~i~L~SP~Gt~s~l~~~~~~d~~~~g~~~~~f~s~~~~gE~~~G~W~l~V~d~~~~~~~G~l~~w~L 461 (471)
T 1p8j_A 394 LAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTL 461 (471)
T ss_dssp EEEEEECTTCCEEEEECCCTTCCCSCCEEEEEEEECTTTTCCCCEEEEEEEEECSSSCCCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEeCCCCCCcccCCccccEEeeeeeeCCCCCccEEEEEEECCCCCCcEEEEEEEE
Confidence 9999999999999999999999888999999999999999999999999999996 4688877665
|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-87 Score=732.45 Aligned_cols=452 Identities=38% Similarity=0.685 Sum_probs=405.2
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 118 GMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 118 ~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
..|+||+|.+||||+++++ ++.+|++.++|+ .+++|+||+|||||+|||.+||||.+++....+|+|.+++.+|.
T Consensus 18 ~~~~Dp~~~~qW~l~~~~~----~g~~i~~~~aw~-~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~~~ 92 (503)
T 2id4_A 18 LSINDPLFERQWHLVNPSF----PGSDINVLDLWY-NNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPK 92 (503)
T ss_dssp TTCCCTTGGGCTTTSCSSS----TTCSCCCHHHHH-TTCSCTTCEEEEEESCCCTTSTTTTTTBCGGGCEETTTTBSCCC
T ss_pred CCCCCCChhhccCcCCCCC----cccccChHHHHh-cCCCCCCeEEEEEeCCCCCCChhHhhcccccCcccCCCCCCCCC
Confidence 3499999999999998775 568999999999 99999999999999999999999999988777899998877766
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC--chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE--TTDLIESKALQFGLDKVDIYSGSWGPPDDGKS 275 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~--~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~ 275 (586)
|.. |..+|||||||+|+|..+|+.|+.||||+|+|+++|++++. ..+++.++.|+.. ++ +|||||||....+..
T Consensus 93 p~~--d~~gHGT~vAGiiaa~~~n~~~~~GvAp~a~i~~~rv~~~~~~~~~~~~ai~~a~~-~~-~Iin~S~G~~~~~~~ 168 (503)
T 2id4_A 93 PRL--SDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIYGLD-VN-DIYSCSWGPADDGRH 168 (503)
T ss_dssp CCS--TTTTHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECTTSCCCHHHHHHHTTTTTT-TC-SEEEECEESCCSSSC
T ss_pred CCC--CCCChHHHHHHHHHhccCCCCCcEEECCCCEEEEEEeeCCCCChHHHHHHHHhHhh-cC-CEEEeCCCcCCCCcc
Confidence 544 77899999999999998899999999999999999999764 5567788888776 44 999999998876666
Q ss_pred CCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecccc
Q psy5372 276 MDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYS 355 (586)
Q Consensus 276 ~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~ 355 (586)
.+.+...+.+++++++.++|+++|++||+||||+|...+.|.++.|+.++++|+|||++.++.+++||++|+..++.+++
T Consensus 169 ~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~~~~a~~S~~g~~~~~~a~~ 248 (503)
T 2id4_A 169 LQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYS 248 (503)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTTSCCCTTCCCCTTEEEEEEC
T ss_pred ccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCCCCcCCcCCCCCcceEeecC
Confidence 66677789999999998877778999999999999877778888888999999999999999999999999999888876
Q ss_pred CCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCC-CCCCccccCCCccc
Q psy5372 356 GGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLS-HVSGWERNARDLWF 434 (586)
Q Consensus 356 ~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~-~~~~w~~n~~g~~~ 434 (586)
++ ||..|++++..+.+|..++|||||||+|||++|||++++|+|+++|||++|+.||++.... . +.|..|++|..+
T Consensus 249 ~g--pG~~I~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~-~~~~~~~~g~~~ 325 (503)
T 2id4_A 249 SG--SGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNAD-GDWRDSAMGKKY 325 (503)
T ss_dssp SB--TTBCEEEECSTTCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGG-GCCEECSSSSEE
T ss_pred CC--CCCceEeecCCCCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcC-CCceecCCCCcc
Confidence 54 8999999987888999999999999999999999999999999999999999999998876 4 689999999999
Q ss_pred CCcccccccCHHHHHHHHhccCCCCCcceeeeeeecCcceecCCC-CceEEEEEecCCCCCCccceeeeeEEEEEEEeCC
Q psy5372 435 HSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYA-SSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHP 513 (586)
Q Consensus 435 ~~~~G~G~vna~~Av~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~ 513 (586)
+..||||+||+.+||++|++|..++++..|..+. ......|+.+ ..++++|+++.|......+.++|||+|+++++|+
T Consensus 326 ~~~~G~G~vda~~Av~~a~~~~~~~~~~~~~~~~-~~~~~~Ip~~~~~~~~~i~v~~~~~~~~~~~~lE~V~v~v~i~h~ 404 (503)
T 2id4_A 326 SHRYGFGKIDAHKLIEMSKTWENVNAQTWFYLPT-LYVSQSTNSTEETLESVITISEKSLQDANFKRIEHVTVTVDIDTE 404 (503)
T ss_dssp BTTTBTCBCCHHHHHHHHTSCCCCCCEEEEECCC-BCCCEEECCTTCCEEEEEEECHHHHHHTTEEEEEEEEEEEEEEES
T ss_pred CcccCCcEecHHHHHHHHhccCcCCccceeeccc-cccccccCCCCCceeEEEEEcccccccccceeEEEEEEEEEeccC
Confidence 9999999999999999999999999988776554 4455677765 4688899998876655678899999999999999
Q ss_pred cccceEEEEEcCCCCEEEeecCCCCCCCCCCcccceEeeeeecCCCCCceEEEEEEECC--CCCeeeEEEc
Q psy5372 514 RRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTK--YDGLLDFITR 582 (586)
Q Consensus 514 ~~g~l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~--~~g~l~~~~~ 582 (586)
++|||+|+|+||+||++.|+.+|..|.+..||.+|+|||++||||++.|+|||+|.|.. ..|.|+-.++
T Consensus 405 ~rgdL~i~L~SP~Gt~s~L~~~r~~d~~~~g~~~~~f~s~~~~GE~~~G~WtL~V~d~~~~~~G~l~~w~L 475 (503)
T 2id4_A 405 IRGTTTVDLISPAGIISNLGVVRPRDVSSEGFKDWTFMSVAHWGENGVGDWKIKVKTTENGHRIDFHSWRL 475 (503)
T ss_dssp SGGGEEEEEECTTCCEEEEECCCTTCCCSSCEEEEEEEESTTTTCCCCEEEEEEEEESSTTCCEEEEEEEE
T ss_pred CCceEEEEEECCCCCEEEeecCCCCCcccCCcccceEecccccCCCCCccEEEEEEeCCCCCceEEEEEEE
Confidence 99999999999999999999999999888999999999999999999999999999985 5788877665
|
| >3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-81 Score=700.62 Aligned_cols=439 Identities=27% Similarity=0.440 Sum_probs=354.5
Q ss_pred CCCCCCCCCCcccccCCC-----CCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCC
Q psy5372 120 FTDEWWPMQWYEQDYRLS-----NSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKW 194 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~-----~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~ 194 (586)
.+||+|.+||||+|++|. ++.++.|||+.++|+ .+++|+||+|||||+|||++||||++++... .+++.++..
T Consensus 27 ~~DPl~~~QW~l~n~gq~~~~~~~g~~g~Dinv~~aw~-~g~tG~GV~VaViDtGid~~HpDL~~n~~~~-~~~~~~~~~ 104 (600)
T 3hjr_A 27 GANPLQDQQWYLLNSGQDGFSARGGIAGNDLNLWWAHR-TGVLGQGVNVAVVDDGLAIAHPDLADNVRPG-SKNVVTGSD 104 (600)
T ss_dssp CCCTTGGGCTTTCCSSCCTTSSCCCCTTCSCCCHHHHH-HTCSCTTCEEEEESSCCCTTCTTTGGGBCSC-CBCTTTSSS
T ss_pred CCCCChhhccCcccCCCccccccCCCCCcccCHHHHHH-cCCCCCCeEEEEEcCCCCCCChhHhhccccC-cceeecCCC
Confidence 489999999999999984 577899999999999 9999999999999999999999999998763 577888777
Q ss_pred CCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCC
Q psy5372 195 DITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPP 270 (586)
Q Consensus 195 ~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~ 270 (586)
+|.|.. +.++|||||||+|||. +|+.|+.||||+|+|+++|++++. .++++.++.+....++++|||||||..
T Consensus 105 dp~p~~--~~~gHGThVAGiIAa~-~n~~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~ 181 (600)
T 3hjr_A 105 DPTPTD--PDTAHGTSVSGIIAAV-DNAIGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMS 181 (600)
T ss_dssp CCCCCS--TTCCHHHHHHHHHHCC-SSSSSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCC
T ss_pred CCCCCC--CCCChHHHHHHHHhEe-CCCCCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCcc
Confidence 777654 6789999999999996 789999999999999999999753 566666664444447899999999976
Q ss_pred CCCCCCCCchHHHHHHHHHHHH-hccCCCCcEEEEecCCCCCC------------------CCCCCCCCCCCCceEEEEe
Q psy5372 271 DDGKSMDGPGKLSKAAIDRGIR-EGRQGKGVLFVFAAGNGKYN------------------GDNCAADGYINSIYTIAIA 331 (586)
Q Consensus 271 ~~~~~~~~~~~~~~~a~~~a~~-~~~~~~Gi~~V~AAGN~g~~------------------~~~~~~~~~~~~~~vi~Vg 331 (586)
......... ....++.+++. ..++++|+++|+||||++.. .+.++++.++.++++|+||
T Consensus 182 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVg 259 (600)
T 3hjr_A 182 VVDPRSANS--LDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVS 259 (600)
T ss_dssp CSSCCCSCS--HHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEE
T ss_pred ccCCccCCc--chhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEe
Confidence 433222111 22233333332 23345899999999997542 2456777888889999999
Q ss_pred eecCCCCCCCCCCCCCcceeccccCCCCC-CCceEEecCC--------------------------CCeeeccCCCCchH
Q psy5372 332 SAREDGQSPFYSEECTGLIATAYSGGISD-PVKIITTDVH--------------------------NTCTCEHSGTSAAA 384 (586)
Q Consensus 332 a~~~~~~~a~~S~~G~~~~~~~~~~~~ap-g~~i~st~~~--------------------------~~~~~~~~GTS~Aa 384 (586)
|++.++.+++||++|+.+++.++++.... ...+++++.+ ..+|..++||||||
T Consensus 260 A~~~~g~~a~yS~~G~~v~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAa 339 (600)
T 3hjr_A 260 ALNADGVRSSYSSVGSNIFLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSAT 339 (600)
T ss_dssp EECTTSSBCTTCCBCTTCCEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHH
T ss_pred eecCCCCEeecccCCcceeeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccc
Confidence 99999999999999999988887654222 2334444332 24577899999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCC-------------------CCccccCCCcccCCcccccccCH
Q psy5372 385 PIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV-------------------SGWERNARDLWFHSAYGFGLINT 445 (586)
Q Consensus 385 P~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~-------------------~~w~~n~~g~~~~~~~G~G~vna 445 (586)
|||||++|||+|++|+||++|||++|+.||++++.... .+|.+|++|+.|++.||||++|+
T Consensus 340 P~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA 419 (600)
T 3hjr_A 340 PSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDV 419 (600)
T ss_dssp HHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCH
T ss_pred hhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecH
Confidence 99999999999999999999999999999999987653 26999999999999999999999
Q ss_pred HHHHHHHhccCCCCCcceeeeeee--cCcceecCCC--CceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEE
Q psy5372 446 FKLVSLAKNWVNVPAQAKCEIALD--VGSSTGFSYA--SSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIE 521 (586)
Q Consensus 446 ~~Av~~a~~~~~~~~~~~~~~~~~--~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~ 521 (586)
.+||++|+.|++++++..+..... ......+++. .....++.+. ...+||||+|+|+|+|++||||+|+
T Consensus 420 ~~aV~~A~~w~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~lE~V~v~v~i~h~~rgdL~i~ 492 (600)
T 3hjr_A 420 NKALELAANHQPLPPLVQLPWQKINVTGSAAAIADVGNSPTSSTTRIA-------TPLTVEAVQVMVSLDHQRLPDLLIE 492 (600)
T ss_dssp HHHHHHHTTCCCCCCCEECCCEEEECCGGGGEECTBCSSCEEEEEEEC-------SCCBEEEEEEEEEEECSSGGGEEEE
T ss_pred HHHHHHhhcCcccCCceecccccccccCcccccccccCcceeeeeeec-------cCCEEEEEEEEEEEecCCCCceEEE
Confidence 999999999999999887754331 1122333332 2344455554 4567999999999999999999999
Q ss_pred EEcCCCCEEEeecCCCC------C------CCCCCcccceEeeeeecCCCCCceEEEEEEECC
Q psy5372 522 LTAPSGVKSVLMEPRPQ------D------DCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTK 572 (586)
Q Consensus 522 l~sPsGT~s~l~~~~~~------d------~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~ 572 (586)
|+||+||+|+|+.++.. | ....|+++|+|||++||||+++|+|||+|.|..
T Consensus 493 L~SP~Gt~s~Ll~~~~~~~~~~~d~~~~~~~~~~g~~~w~f~s~~~wGE~~~G~WtL~V~D~~ 555 (600)
T 3hjr_A 493 LVSPAGTRSILLSPFNSLVGQSLDQQQLGFVRTKGLRDMRMLSNKFYGESAQGTWRLEVTDVA 555 (600)
T ss_dssp EECTTCCEEEEECSSCSCCHHHHHHHHTSSCCCCEEEEEEEEECTTTTCBCCEEEEEEEEEBC
T ss_pred EECCCCCEEEeCCCCCccccccccccccCcccccCcccceeecccccCCCCCccEEEEEEECC
Confidence 99999999999986542 1 245678899999999999999999999999985
|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=522.84 Aligned_cols=446 Identities=18% Similarity=0.197 Sum_probs=331.5
Q ss_pred eEEEEEcCCc--chHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccc-----------cCCCceeEEe
Q psy5372 14 QWVVHISGDP--DIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGL-----------LNDARVIWTQ 80 (586)
Q Consensus 14 ~~iV~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~p~V~~ve 80 (586)
.|||+||++. ..+.++.+++|.++...+..+ +. ++++++++++++| +++|.|++||
T Consensus 37 ~~iV~~~~~~~~~~~~~~~~~~g~~v~~~~~~~-~g----------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~ 105 (539)
T 3afg_A 37 STIIMFDNQADKEKAVEILDFLGAKIKYNYHII-PA----------LAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQ 105 (539)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTCEEEEECSSS-SE----------EEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHhcCCeEEEEeeee-eE----------EEEEeCHHHHHHHHhhccccccccccCCCeeEEE
Confidence 4999999754 334567788898887776533 33 3345556666677 8999999999
Q ss_pred ecchhhccccchhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCC
Q psy5372 81 QQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAG 160 (586)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~g 160 (586)
++..+++... + |.+.... ..+++..+|+ .+++|+|
T Consensus 106 ~d~~~~~~~~--------------------------------~-----~~~~~~~-------~~~~~~~~~~-~g~~G~g 140 (539)
T 3afg_A 106 EDYVVKVAVE--------------------------------T-----EGLDESA-------AQVMATNMWN-LGYDGSG 140 (539)
T ss_dssp ECCEEECC-------------------------------------------------------CCBCSCCBC-CSCCCTT
T ss_pred ecccccccCc--------------------------------c-----ccCCccc-------cccCcHhHHh-cCCCCCC
Confidence 9988766421 0 1111000 3466778999 8999999
Q ss_pred cEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCc-ceeeecCcEEEEEEc
Q psy5372 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKC-GVGVCYGARVGGVKL 239 (586)
Q Consensus 161 v~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g-~~GVAp~a~l~~~~v 239 (586)
|+|||||||||.+||||.+++.. .++|.++..++. |.++|||||||+|+|.+++..| +.||||+|+|+++|+
T Consensus 141 v~VaViDtGid~~Hpdl~~~i~~--~~d~~~~~~~~~-----D~~gHGThVAgiiag~~~~~~g~~~GvAp~A~l~~~kv 213 (539)
T 3afg_A 141 ITIGIIDTGIDASHPDLQGKVIG--WVDFVNGKTTPY-----DDNGHGTHVASIAAGTGAASNGKYKGMAPGAKLVGIKV 213 (539)
T ss_dssp CEEEEEESBCCTTSGGGTTTEEE--EEETTTCCSSCC-----BSSSHHHHHHHHHHCCCGGGTTTTCCSCTTCEEEEEEC
T ss_pred cEEEEEecCCCCCChHHhCCEee--eEECCCCCCCCC-----CCCCCHHHHHHHHhCcCccCCCCEEEECCCCEEEEEEe
Confidence 99999999999999999987643 567776554443 7899999999999998665444 689999999999999
Q ss_pred cCCC----chhHHHHHHhhhcC---CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCC
Q psy5372 240 LDGE----TTDLIESKALQFGL---DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYN 312 (586)
Q Consensus 240 ~~~~----~~~~~~a~~~~~~~---~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~ 312 (586)
++.. .++++++++|++.. .+++|||||||..... .....+.++++++.+ +|++||+||||+|..
T Consensus 214 ~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~----~~~~~l~~ai~~a~~-----~GvlvV~AAGN~g~~ 284 (539)
T 3afg_A 214 LNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSS----DGTDSLSQAVNNAWD-----AGLVVVVAAGNSGPN 284 (539)
T ss_dssp SCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCC----CSCSHHHHHHHHHHH-----TTCEEEEECCSCCSS
T ss_pred ecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCC----ccchHHHHHHHHHHh-----cCCEEEEECCCCCCC
Confidence 9753 67899999999864 3899999999986431 122367888888877 699999999999974
Q ss_pred CCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCC----C----CeeeccCCCCchH
Q psy5372 313 GDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVH----N----TCTCEHSGTSAAA 384 (586)
Q Consensus 313 ~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~----~----~~~~~~~GTS~Aa 384 (586)
. +....|+..+++|+|||++..+.++.||++|+......+++..+||..|+++... + .+|..++||||||
T Consensus 285 ~--~~~~~Pa~~~~vitVgA~~~~~~~a~fSs~Gp~~~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAa 362 (539)
T 3afg_A 285 K--YTVGSPAAASKVITVGAVDKYDVITDFSSRGPTADNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMAT 362 (539)
T ss_dssp S--SCCCTTTTCSSSEEEEEECTTSCBCSSSCCCCCTTCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHH
T ss_pred C--CcccCCccCCceEEEeeecCCcccccccCCCCCCCCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHH
Confidence 2 3345678889999999999999999999999987666667778899999998642 2 2488999999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhccCCCCCccee
Q psy5372 385 PIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKC 464 (586)
Q Consensus 385 P~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~~~~~~~ 464 (586)
|||||++|||++++|+|++++||++|+.||++..... ..+..||||+||+.+|++.+ .+. ..
T Consensus 363 P~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~-~~~------~~ 424 (539)
T 3afg_A 363 PHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD-NYA------KL 424 (539)
T ss_dssp HHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG-GSE------EE
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc-ccC------ce
Confidence 9999999999999999999999999999999874211 13678999999999999876 221 11
Q ss_pred eeeeecCcceecCCCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCc-ccceEEEEEcCCCCEEEeecCCCCCCCCC
Q psy5372 465 EIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPR-RGDVRIELTAPSGVKSVLMEPRPQDDCKT 543 (586)
Q Consensus 465 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~-~g~l~i~l~sPsGT~s~l~~~~~~d~~~~ 543 (586)
. ....+...+....+|+++.. ..+. +++.+.. .+||+|+|++|+|++..... . .
T Consensus 425 ~------~~~~~~~~~~~~~~~~i~~~----------~~~~--~Tl~w~~~~~dldl~l~~p~G~~~~~~~--~----~- 479 (539)
T 3afg_A 425 T------FTGYVSNKGSQSHQFTISGA----------GFVT--ATLYWDNSGSDLDLYLYDPNGNQVDYSY--T----A- 479 (539)
T ss_dssp E------EEEEECTTCEEEEEEEEESC----------SEEE--EEEEESCTTCEEEEEEECTTSCEEEEEC--C----S-
T ss_pred e------eeeeecCCCceeEEEEECCC----------CeeE--EEEeecCCCCCeEEEEECCCCCEeeccc--c----C-
Confidence 0 11223334433455555421 2233 3555654 79999999999999853211 1 0
Q ss_pred CcccceEeeeeecCCCCCceEEEEEEECCCCCeeeEE
Q psy5372 544 GFVDWSILTLKHWGEDPVGEWKFEIFDTKYDGLLDFI 580 (586)
Q Consensus 544 g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~~~g~l~~~ 580 (586)
..+ +.+ ..|.+.+.|+|+|+|.+....|...|-
T Consensus 480 -~~~--~E~-v~~~~~~~G~y~i~V~~~~~sg~y~~~ 512 (539)
T 3afg_A 480 -YYG--FEK-VGYYNPTAGTWTIKVVSYSGSANYQVD 512 (539)
T ss_dssp -SBS--CEE-EEEESCCSEEEEEEEEEEESCEEEEEE
T ss_pred -CCc--eeE-EEECCCCCEEEEEEEEeccCCceEEEE
Confidence 111 222 358899999999999988766666553
|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-59 Score=492.62 Aligned_cols=355 Identities=19% Similarity=0.208 Sum_probs=285.4
Q ss_pred eeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecchhhccccc
Q psy5372 12 LNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFAKHLRKRA 91 (586)
Q Consensus 12 ~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~~~~~~~~ 91 (586)
+.+|||+||++.. .+++.+++|.++...+..+ +.+.. +++++.+++|+++|.|++|||+..+++....
T Consensus 2 ~~~~iV~~~~~~~-~~~~~~~~g~~v~~~~~~~-~~~~~----------~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~ 69 (395)
T 2z2z_A 2 TIRVIVSVDKAKF-NPHEVLGIGGHIVYQFKLI-PAVVV----------DVPANAVGKLKKMPGVEKVEFDHQAVLLGKP 69 (395)
T ss_dssp EEEEEEEECTTTC-CHHHHHHTTCEEEEECSSS-SEEEE----------EEEGGGHHHHHTSTTEEEEEECCEEEECCEE
T ss_pred cEEEEEEECCCcc-HHHHHHHcCCEEEEEeccC-CEEEE----------EECHHHHHHHHcCCCceEEEEeeeecccCCC
Confidence 4689999998743 4677889999998887654 44444 3456779999999999999999998775421
Q ss_pred hhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCC--cEEEEEecC
Q psy5372 92 EIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAG--VNIIIIDDG 169 (586)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~g--v~VaViDtG 169 (586)
..+. ....++....||+| ..|+++.+|+ .+ +|+| |+|||||||
T Consensus 70 ~~~~----------------------~~~~~~~~~~~w~~-----------~~i~~~~~w~-~~-~G~g~~v~VaViDtG 114 (395)
T 2z2z_A 70 SWLG----------------------GGSTQPAQTIPWGI-----------ERVKAPSVWS-IT-DGSVSVIQVAVLDTG 114 (395)
T ss_dssp CC----------------------------CCSCCCCHHH-----------HHTTCGGGGG-TC-SSCCTTCEEEEEESC
T ss_pred Cccc----------------------ccccCccccCCcch-----------hhcCHHHHHh-hc-CCCCCcEEEEEEcCC
Confidence 1000 00234555678999 4567889999 77 9999 999999999
Q ss_pred ccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----ch
Q psy5372 170 MEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TT 245 (586)
Q Consensus 170 id~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~ 245 (586)
||.+||+|.+++.. +++|..+.....+....|..+|||||||||+|. +|+.|+.||||+|+|+++|+++.. .+
T Consensus 115 id~~Hp~l~~~~~~--~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~-~n~~g~~GvAp~a~l~~~kv~~~~g~~~~~ 191 (395)
T 2z2z_A 115 VDYDHPDLAANIAW--CVSTLRGKVSTKLRDCADQNGHGTHVIGTIAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYS 191 (395)
T ss_dssp BCTTCTTTGGGEEE--EEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCC-CSSSSCCCSSTTCEEEEEECSCTTSEEEHH
T ss_pred CCCCChhHhhcccc--CccccCCcccCCCCCCCCCCCCHHHHHHHHHee-cCCCceEEECCCCEEEEEEEecCCCCccHH
Confidence 99999999997654 456654432111100017899999999999998 788899999999999999999743 67
Q ss_pred hHHHHHHhhhcC-------------------CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEec
Q psy5372 246 DLIESKALQFGL-------------------DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAA 306 (586)
Q Consensus 246 ~~~~a~~~~~~~-------------------~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AA 306 (586)
+++++++|+... .+++|||||||.... ...+.++++++.. +|+++|+||
T Consensus 192 ~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~-----~gv~vV~AA 259 (395)
T 2z2z_A 192 DIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYN-----AGIVIVAAS 259 (395)
T ss_dssp HHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHH-----TTCEEEEEC
T ss_pred HHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC-------CHHHHHHHHHHHH-----CCCEEEEEC
Confidence 899999998863 289999999997532 2367888888876 699999999
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHH
Q psy5372 307 GNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPI 386 (586)
Q Consensus 307 GN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~ 386 (586)
||++... ...|+..+++|+|||++.++.++.||++|+.+ .+||..|+++. +++.|..++||||||||
T Consensus 260 GN~g~~~----~~~Pa~~~~vi~Vga~~~~~~~a~fS~~G~~v--------~APG~~i~s~~-~~~~y~~~sGTS~AaP~ 326 (395)
T 2z2z_A 260 GNEGAPS----PSYPAAYPEVIAVGAIDSNDNIASFSNRQPEV--------SAPGVDILSTY-PDDSYETLMGTAMATPH 326 (395)
T ss_dssp CSSCCSS----CCBTTTSTTEEEEEEECTTSCBCTTSCSSCSE--------EEECSSEEEEE-TTTEEEEEESHHHHHHH
T ss_pred CCCCCCC----CCCccCCCCEEEEEEecCCCCCCcccCCCCCE--------EeCCCCeeeec-CCCceEecCCHHHHHHH
Confidence 9999752 24577889999999999999999999999975 34899999996 56678999999999999
Q ss_pred HHHHHHHHHhhCC-------------CCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHh
Q psy5372 387 AAGVLALALEANP-------------NMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAK 453 (586)
Q Consensus 387 VAG~aALl~~~~p-------------~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~ 453 (586)
|||++|||++++| .|++.+||++|+.||++..... ++..||||+||+.+||+.|+
T Consensus 327 VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g------------~~~~~G~G~vd~~~A~~~a~ 394 (395)
T 2z2z_A 327 VSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG------------WDADYGYGVVRAALAVQAAL 394 (395)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS------------SBTTTBTCBCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC------------CCCCccCceeCHHHHHHHHh
Confidence 9999999999999 9999999999999999875322 46789999999999999886
|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-57 Score=499.71 Aligned_cols=384 Identities=16% Similarity=0.174 Sum_probs=289.4
Q ss_pred ccccceeeeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCcccccccccc--CCCceeEEeec
Q psy5372 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLL--NDARVIWTQQQ 82 (586)
Q Consensus 5 ~~~~~~~~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~p~V~~ve~~ 82 (586)
....++++++|||+||++ ...+++.++++.++...+..+ +.+.++++. ...++.+++|+ ++|.|++|||+
T Consensus 24 ~~~~~~~~~~~IV~~k~~-~~~~~~~~~~g~~v~~~~~~i-~~~~~~~~~------~~~~~~~~~l~~~~~~~V~~vepd 95 (671)
T 1r6v_A 24 LRDGEYTEGKILVGYNDR-SEVDKIVKAVNGKVVLELPQI-KVVSIKLNG------MTVKQAYDKIKALALKGIRYVEPS 95 (671)
T ss_dssp CCTTSBCTTEEEEEESSH-HHHHHHHHHHTCEEEEEEGGG-TEEEEECSS------CCHHHHHHHHTTSCCSSEEEEECC
T ss_pred cccCccCCccEEEEECCC-cCHHHHHHhcCCeEEEEcCCC-cEEEEEeCC------cCHHHHHHHHHhccCCCceEEecC
Confidence 345689999999999984 445677888999988887755 556554421 11233444554 58999999999
Q ss_pred chhhccccchh-hHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHH-HHcCCCCCCC
Q psy5372 83 FAKHLRKRAEI-QELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPV-YQELNINGAG 160 (586)
Q Consensus 83 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~a-w~~~~~~G~g 160 (586)
+.+++..+... +.+. . ...+...........++++...||+| ..|++.++ |+ . ++|+|
T Consensus 96 ~~~~l~~p~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~W~l-----------~~I~~~~a~w~-~-~tG~g 155 (671)
T 1r6v_A 96 YKRELIKPTVVKPNPD-----M--YKIRKPGLNSTARDYGEELSNELWGL-----------EAIGVTQQLWE-E-ASGTN 155 (671)
T ss_dssp BCCEECCCEECCCCTT-----T--TCSSSSCCSSSTTCCSSTTGGGCHHH-----------HHTTCCHHHHH-H-CSCTT
T ss_pred eEEEeccccccCcccc-----c--ccccccccccccccccccccccCCch-----------hccCCchhhhh-c-cCCCC
Confidence 98776532110 0000 0 00000000111122356677789999 45778899 99 5 89999
Q ss_pred cEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEcc
Q psy5372 161 VNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLL 240 (586)
Q Consensus 161 v~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~ 240 (586)
|+|||||||||.+||||.+++.. ++++..+...|......+.++|||||||+|+|. +|+.|+.||||+|+|+++|++
T Consensus 156 V~VAVIDTGVd~~HpdL~~~~~~--g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~-~ng~gv~GVAP~A~I~~vkv~ 232 (671)
T 1r6v_A 156 IIVAVVDTGVDGTHPDLEGQVIA--GYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAK-KDGKGIVGVAPGAKIMPIVIF 232 (671)
T ss_dssp CEEEEEESCCBTTSGGGTTTBCC--EEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCC-CSSSSCCCSCTTSEEEEEESB
T ss_pred CEEEEEeCCCCCCCccccccEEe--cccccCCCcCCCCCCCccCCCcchhhhhhhhcc-CCCCceEEECCCCEEEEEEec
Confidence 99999999999999999998754 455433221111110115689999999999998 678899999999999999998
Q ss_pred CC------C----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCC
Q psy5372 241 DG------E----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGK 310 (586)
Q Consensus 241 ~~------~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g 310 (586)
+. . ...+++++.|+.. ++++|||||||.... ...+.++++++.+ +|+++|+||||++
T Consensus 233 ~~~~~~~g~g~~s~~~i~~ai~~A~~-~gadVIN~SlG~~~~-------s~~l~~Ai~~A~~-----~GvlvVaAAGN~g 299 (671)
T 1r6v_A 233 DDPALVGGNGYVGDDYVAAGIIWATD-HGAKVMNHSWGGWGY-------SYTMKEAFDYAME-----HGVVMVVSAGNNT 299 (671)
T ss_dssp CCHHHHCTTSBCCHHHHHHHHHHHHH-TTCSEEEECEEBSCC-------CHHHHHHHHHHHH-----TTCEEEEECCSCS
T ss_pred cCccccCCCCccCHHHHHHHHHHHHH-cCCCEEEeCCCCCCC-------CHHHHHHHHHHHh-----CCCEEEEeCCCCC
Confidence 75 1 2457899999988 799999999997532 2467888888877 6999999999999
Q ss_pred CCCCCCCCCCCCCCceEEEEeeecCCCC---CCCCCCCCCcceeccccCCCCCCCceEEecCC-----------------
Q psy5372 311 YNGDNCAADGYINSIYTIAIASAREDGQ---SPFYSEECTGLIATAYSGGISDPVKIITTDVH----------------- 370 (586)
Q Consensus 311 ~~~~~~~~~~~~~~~~vi~Vga~~~~~~---~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~----------------- 370 (586)
... ....|+..+++|+|||++.++. ++.||++|+.+++. +||..|+++.+.
T Consensus 300 ~~~---~~~yPA~~~~VItVgA~d~~g~~~~~a~fSn~G~~vdv~------APG~~I~St~p~~~~~g~~~~~~~~~~~~ 370 (671)
T 1r6v_A 300 SDS---HHQYPAGYPGVIQVAALDYYGGTFRVAGFSSRSDGVSVG------APGVTILSTVPGEDSIGYEGHNENVPATN 370 (671)
T ss_dssp SSC---CCCBTTTSTTCEEEEEEEEETTEEEECSSSCCCTTEEEE------EECSSEEEECCCTTSTTCCCCCTTCCCSS
T ss_pred CCC---CccCcccCCCeEEEEEEcCCCCceeeccccCCCCCeeEE------ecCCCEEeecCCCCccccccccccccccC
Confidence 752 2345778899999999999888 99999999988874 488889887542
Q ss_pred CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHH
Q psy5372 371 NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVS 450 (586)
Q Consensus 371 ~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~ 450 (586)
+++|..++|||||||||||++|||++++|+|+++|||++|+.||++.+..+ ++..||||+||+.+||+
T Consensus 371 ~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~~G~G~vna~~Al~ 438 (671)
T 1r6v_A 371 GGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDTGYGLVKLDAALQ 438 (671)
T ss_dssp SCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTTBTCBCCHHHHHH
T ss_pred CCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCCcccceeCHHHHhh
Confidence 236889999999999999999999999999999999999999999875422 46789999999999998
Q ss_pred HHh
Q psy5372 451 LAK 453 (586)
Q Consensus 451 ~a~ 453 (586)
.+.
T Consensus 439 ~~l 441 (671)
T 1r6v_A 439 GPL 441 (671)
T ss_dssp CCC
T ss_pred hhc
Confidence 653
|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=445.15 Aligned_cols=273 Identities=22% Similarity=0.279 Sum_probs=232.3
Q ss_pred CCCCCCC-CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 119 MFTDEWW-PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 119 ~~~dp~~-~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
.||||+| .+||+| ..|++.++|+ .+.+|+||+|||||+|||.+||+|.+++.. +++|.+++.++.
T Consensus 2 ~pndp~~~~~~w~l-----------~~i~~~~aw~-~~~g~~gv~VaViDtGvd~~hp~l~~~~~~--~~~~~~~~~~~~ 67 (280)
T 1dbi_A 2 TPNDTYYQGYQYGP-----------QNTYTDYAWD-VTKGSSGQEIAVIDTGVDYTHPDLDGKVIK--GYDFVDNDYDPM 67 (280)
T ss_dssp CCCCTTHHHHCCTT-----------GGGTHHHHTT-TCCCCTTCEEEEEESCCCTTSTTTTTTEEE--EEETTTTBSCCC
T ss_pred CCCCcccccCCCCh-----------hhcCcHHHHh-hcCCCCCCEEEEEeCCcCCCChhhccCccc--ceeccCCCCCCC
Confidence 4899999 899999 4577999999 887788999999999999999999987653 678877665543
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDG 273 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~ 273 (586)
|..+|||||||||++..+|+.|+.||||+|+|+++|+++. ..++++++++|+.. ++++|||||||....
T Consensus 68 -----d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~-~g~~Vin~S~G~~~~- 140 (280)
T 1dbi_A 68 -----DLNNHGTHVAGIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAAD-SGAEVINLSLGCDCH- 140 (280)
T ss_dssp -----CSSSHHHHHHHHHHCCCSSSSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHH-TTCSEEEECCSSCCC-
T ss_pred -----CCCCcHHHHHHHHhCcCCCCCcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHH-CCCCEEEeCCCCCCC-
Confidence 7899999999999999889999999999999999999864 36789999999987 899999999998532
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecc
Q psy5372 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATA 353 (586)
Q Consensus 274 ~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~ 353 (586)
...+.++++++.+ +|+++|+||||++.. ....|+..+++|+|||++..+.++.||++|+..++.
T Consensus 141 ------~~~~~~ai~~a~~-----~gilvV~AAGN~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~dv~- 204 (280)
T 1dbi_A 141 ------TTTLENAVNYAWN-----KGSVVVAAAGNNGSS----TTFEPASYENVIAVGAVDQYDRLASFSNYGTWVDVV- 204 (280)
T ss_dssp ------CHHHHHHHHHHHH-----TTCEEEEECCBC-------------CCTTSEEEEEECTTSCBCTTBCCSTTCCEE-
T ss_pred ------CHHHHHHHHHHHH-----CCCEEEEECCCCCCC----CCCCccccCCeEEEEeeCCCCCcCCCCCCCCCceEE-
Confidence 2367888888876 699999999999874 224577889999999999999999999999987774
Q ss_pred ccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcc
Q psy5372 354 YSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433 (586)
Q Consensus 354 ~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~ 433 (586)
+||..|+++. .++.|..++|||||||+|||++|||++ |.++++|||++|+.||++...
T Consensus 205 -----ApG~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------- 262 (280)
T 1dbi_A 205 -----APGVDIVSTI-TGNRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------- 262 (280)
T ss_dssp -----EECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------------
T ss_pred -----EecCCeEeec-CCCCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------------
Confidence 5899999985 566789999999999999999999987 899999999999999998742
Q ss_pred cCCcccccccCHHHHHH
Q psy5372 434 FHSAYGFGLINTFKLVS 450 (586)
Q Consensus 434 ~~~~~G~G~vna~~Av~ 450 (586)
.+..||||+||+.+||+
T Consensus 263 ~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp BTTTBSSEECCHHHHHT
T ss_pred CCCcccCCEECHHHHhc
Confidence 13578999999999985
|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=479.59 Aligned_cols=368 Identities=18% Similarity=0.156 Sum_probs=280.6
Q ss_pred eeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccC-CCceeEEeecchhhcccc
Q psy5372 12 LNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLN-DARVIWTQQQFAKHLRKR 90 (586)
Q Consensus 12 ~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~p~V~~ve~~~~~~~~~~ 90 (586)
.+.|+|+++.. ..+.++++++|.++...+..+ +. +.+.++++.+++|++ +|.|++|||+..+++...
T Consensus 44 ~~~yiv~~~~~-~~~~~~~~~~g~~v~~~~~~~-~~----------~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~ 111 (471)
T 3t41_A 44 ELYYSVEYKNT-ATFNKLVKKKSLNVVYNIPEL-HV----------AQIKMTKMHANALANYKNDIKYINATCSTCITSE 111 (471)
T ss_dssp CEEEEEEESCH-HHHHHHHHHHTCEEEEEEGGG-TE----------EEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCC
T ss_pred ceEEEEEcCCH-HHHHHHHHhCCCEEEEecCCc-cE----------EEEEeCHHHHHHHHhcCCCCcEEEecceeccccc
Confidence 35799999974 467888899999987766543 33 334566788999999 999999999998877642
Q ss_pred chhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCc
Q psy5372 91 AEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGM 170 (586)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGi 170 (586)
.. ....++||++..||+|.++.+ ...+|+ .+++|+||+||||||||
T Consensus 112 ~~-----------------------~~~~~~~~~~~~~w~l~~i~~----------~~~~~~-~~~~G~gv~VaViDtGi 157 (471)
T 3t41_A 112 KT-----------------------IDRTSNESLFSRQWDMNKITN----------NGASYD-DLPKHANTKIAIIDTGV 157 (471)
T ss_dssp CC-----------------------CCC---CCSCCCCHHHHTTTT----------TTGGGG-GCCSSCCCCEEEEESCC
T ss_pred cc-----------------------cccCCCCccccccccHhhccC----------cHHHHh-ccCCCCCcEEEEEeCCC
Confidence 11 123379999999999976542 127999 99999999999999999
Q ss_pred cCCCcccccCCCCCCcccccCC------CCCCC--CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC
Q psy5372 171 EYTHEDIKDSFAPELSYNFNAE------KWDIT--PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG 242 (586)
Q Consensus 171 d~~Hpdl~~~~~~~~~~~~~~~------~~~~~--~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~ 242 (586)
+.+||+|.+++... ..++... ..+.. +....|..+|||||||||+|.++ +.||||+|+|+++|+++.
T Consensus 158 d~~Hp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~----~~GvAp~a~l~~~kv~~~ 232 (471)
T 3t41_A 158 MKNHDDLKNNFSTD-SKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK----LIGVAPNNKFTMYRVFGS 232 (471)
T ss_dssp CTTCTTTTTTBCTT-CEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS----SBCSSTTSCEEEEECCSS
T ss_pred CCCChhHhcCcccC-CcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc----eeEECCCCeEEEEEeccC
Confidence 99999999976542 1222221 11111 11112789999999999998742 699999999999999873
Q ss_pred ---CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCC-CCC--------CchHHHHHHHHHHHHhccCCCCcEEEEecCCCC
Q psy5372 243 ---ETTDLIESKALQFGLDKVDIYSGSWGPPDDGK-SMD--------GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGK 310 (586)
Q Consensus 243 ---~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~-~~~--------~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g 310 (586)
..++++++++++.. ++++|||||||...... ... .....+.++++++.. +|++||+||||+|
T Consensus 233 ~~~~~~~i~~ai~~a~~-~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~-----~Gi~vV~AAGN~g 306 (471)
T 3t41_A 233 KKTELLWVSKAIVQAAN-DGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKK-----KKSIVVAAAGNDG 306 (471)
T ss_dssp SCCCHHHHHHHHHHHHH-TTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHH-----TTCEEEEECCSSC
T ss_pred CCCcHHHHHHHHHHHHh-CCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHh-----CCCEEEEEcCCCC
Confidence 47789999999998 79999999999732110 001 112345555655555 7999999999999
Q ss_pred CCCCCC--------------CCCCCCCCceEEEEeeecCCCCCCCCCCCCCc-ceeccccCCCCCCCc------------
Q psy5372 311 YNGDNC--------------AADGYINSIYTIAIASAREDGQSPFYSEECTG-LIATAYSGGISDPVK------------ 363 (586)
Q Consensus 311 ~~~~~~--------------~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~-~~~~~~~~~~apg~~------------ 363 (586)
...... .+..|+..+++|+|||++.++.+++||++|+. .++.+ ||.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~~~~a~fS~~G~~~~di~A------PG~~i~~~~~~g~~~~ 380 (471)
T 3t41_A 307 IDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQKSNLSEFSNFGMNYTDIAA------PGGSFAYLNQFGVDKW 380 (471)
T ss_dssp CBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTTSSBCTTCCBCTTTCCEEE------ECCCCHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCceeeccccCCCeEEEEeeCCCCCCCCccCCCCCCCeEEe------cCCCcccccccccccc
Confidence 853221 12367888999999999999999999999995 66644 5544
Q ss_pred ----------eEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCcCCCCCCCCccccCCCc
Q psy5372 364 ----------IITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANP-NMTWRDCQHILAWTSEREPLSHVSGWERNARDL 432 (586)
Q Consensus 364 ----------i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p-~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~ 432 (586)
|+++. .++.|..++|||||||+|||++|||++++| .+++++||++|+.||.+...
T Consensus 381 ~~~~~~~~~~i~s~~-~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------- 446 (471)
T 3t41_A 381 MNEGYMHKENILTTA-NNGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------- 446 (471)
T ss_dssp HHTTTHHHHSEEEEC-TTSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------
T ss_pred cccccccCceeEecC-CCCCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------
Confidence 88885 556788999999999999999999999999 89999999999999997643
Q ss_pred ccCCcccccccCHHHHHHHHhccC
Q psy5372 433 WFHSAYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 433 ~~~~~~G~G~vna~~Av~~a~~~~ 456 (586)
.++..||||+||+.+||++|+++.
T Consensus 447 ~~~~~~G~G~vd~~~Al~~a~~~~ 470 (471)
T 3t41_A 447 KPFSRYGHGELDVYKALNVANQKA 470 (471)
T ss_dssp CCHHHHTTCBBCHHHHTTTTCC--
T ss_pred CCcCccccChhCHHHHHHHHHhhc
Confidence 136789999999999999988763
|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=439.07 Aligned_cols=272 Identities=22% Similarity=0.274 Sum_probs=235.6
Q ss_pred CCCCCCCC-CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 119 MFTDEWWP-MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 119 ~~~dp~~~-~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
.||||+|. +||+| ..|++.++|+ .+ +|+||+|||||+|||.+||+|.+++.. +++|.+++.++.
T Consensus 2 ~pndp~~~~~~w~l-----------~~i~~~~aw~-~~-~G~gv~VaViDtGvd~~h~~l~~~~~~--~~~~~~~~~~~~ 66 (279)
T 1thm_A 2 TPNDPYFSSRQYGP-----------QKIQAPQAWD-IA-EGSGAKIAIVDTGVQSNHPDLAGKVVG--GWDFVDNDSTPQ 66 (279)
T ss_dssp CCCCTTHHHHCCHH-----------HHTTHHHHHT-TC-CCTTCEEEEEESCCCTTCTTTTTTEEE--EEETTTTBSCCC
T ss_pred CCCCCCCCccccCh-----------hhCChHHHHh-cC-CCCCCEEEEEccCCCCCCcchhcCccc--cccccCCCCCCC
Confidence 48999997 99999 4578999999 65 899999999999999999999987653 678877665543
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDG 273 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~ 273 (586)
|..+|||||||||++..+|+.++.||||+|+|+.+|+++. ..++++++++|+.. ++++|||||||....
T Consensus 67 -----d~~gHGT~vAgiia~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~-~g~~Vin~S~G~~~~- 139 (279)
T 1thm_A 67 -----NGNGHGTHCAGIAAAVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAAD-QGAKVISLSLGGTVG- 139 (279)
T ss_dssp -----CSSSHHHHHHHHHHCCCSSSSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH-TTCSEEEECCCBSSC-
T ss_pred -----CCCCcHHHHHHHHhCccCCCCccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHH-CCCCEEEEecCCCCC-
Confidence 7899999999999999889999999999999999999864 36788999999987 799999999998532
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecc
Q psy5372 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATA 353 (586)
Q Consensus 274 ~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~ 353 (586)
...+.++++++.+ +|+++|+||||++... ...|+..+++|+|||++.++.++.||++|+..++.
T Consensus 140 ------~~~l~~ai~~a~~-----~gvlvV~AAGN~g~~~----~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~~~dv~- 203 (279)
T 1thm_A 140 ------NSGLQQAVNYAWN-----KGSVVVAAAGNAGNTA----PNYPAYYSNAIAVASTDQNDNKSSFSTYGSWVDVA- 203 (279)
T ss_dssp ------CHHHHHHHHHHHH-----TTCEEEEECCSSSSCC----CCBTTTSTTEEEEEEECTTSCBCTTCCCCTTCCEE-
T ss_pred ------CHHHHHHHHHHHH-----CCCEEEEeCCCCCCCC----CCCcccCCCeEEEEEeCCCCCcCCcCCCCCceEEE-
Confidence 2367888888876 6999999999999752 23467789999999999999999999999887774
Q ss_pred ccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcc
Q psy5372 354 YSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433 (586)
Q Consensus 354 ~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~ 433 (586)
+||..|+++. .++.|..++|||||||+|||++||| ++|.++++|||++|++||++.+..
T Consensus 204 -----APG~~i~s~~-~~~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~------------- 262 (279)
T 1thm_A 204 -----APGSSIYSTY-PTSTYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT------------- 262 (279)
T ss_dssp -----EECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------
T ss_pred -----EcCCCeEEEe-CCCCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------
Confidence 5889999986 4567899999999999999999999 589999999999999999987532
Q ss_pred cCCcccccccCHHHHHH
Q psy5372 434 FHSAYGFGLINTFKLVS 450 (586)
Q Consensus 434 ~~~~~G~G~vna~~Av~ 450 (586)
...||||+||+.+||+
T Consensus 263 -~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 -GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -TTTBSSEECCHHHHHH
T ss_pred -CccccCCeeCHHHHhc
Confidence 2568999999999996
|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-54 Score=445.98 Aligned_cols=281 Identities=22% Similarity=0.283 Sum_probs=236.8
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCC--CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGA--GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~--gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
|+||.+..||+| ..|+++++|+ .+ +|+ ||+|||||||||.+||+|++++.. +++|..+.....
T Consensus 1 ~~dp~~~~~W~l-----------~~i~~~~aw~-~~-~G~~~gv~VaViDtGid~~Hp~l~~~~~~--~~~~~~~~~~~~ 65 (320)
T 2z30_A 1 STQPAQTIPWGI-----------ERVKAPSVWS-IT-DGSVSVIQVAVLDTGVDYDHPDLAANIAW--CVSTLRGKVSTK 65 (320)
T ss_dssp CCCCBCCCCHHH-----------HHTTCGGGTT-TC-CSCCTTCEEEEEESCBCTTCTTTGGGEEE--EEECGGGCCBCC
T ss_pred CCCCCcCCCCCh-----------hhcChHHHHH-hc-CCCcCCeEEEEECCCCCCCChhHhccccc--CccccCCccCCC
Confidence 689999999999 5677999999 77 999 999999999999999999987654 455654432111
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcC----------------
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGL---------------- 257 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~---------------- 257 (586)
+....|..+|||||||||++. +|+.++.||||+|+|+++|+++.. .++++++++|+...
T Consensus 66 ~~~~~d~~gHGT~vAgiia~~-~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~ 144 (320)
T 2z30_A 66 LRDCADQNGHGTHVIGTIAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGD 144 (320)
T ss_dssp HHHHBCSSSHHHHHHHHHHCC-SSSBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSSCCTTC
T ss_pred CCCCCCCCCCHHHHHHHHHcc-cCCCceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccccccccc
Confidence 100017899999999999997 788899999999999999999743 67889999998763
Q ss_pred ---CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeec
Q psy5372 258 ---DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR 334 (586)
Q Consensus 258 ---~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~ 334 (586)
.+++|||||||.... ...+.++++++.. +|++||+||||++.. ....|+..+++|+|||++
T Consensus 145 ~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~-----~gi~vV~AAGN~g~~----~~~~Pa~~~~vi~Vga~~ 208 (320)
T 2z30_A 145 PDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYN-----AGIVIVAASGNEGAP----SPSYPAAYPEVIAVGAID 208 (320)
T ss_dssp TTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHH-----TTCEEEEECCSSCCS----SCCBTTTSTTEEEEEEEC
T ss_pred cccCCceEEEecCCCCCC-------CHHHHHHHHHHHH-----CCCEEEEeCCCCCCC----CCCCcccCCCeEEEEeeC
Confidence 289999999998542 2367888888876 699999999999875 234577889999999999
Q ss_pred CCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhC-------------CCC
Q psy5372 335 EDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEAN-------------PNM 401 (586)
Q Consensus 335 ~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~-------------p~l 401 (586)
.++.++.||++|+.+ .+||..|+++. .++.|..++|||||||+|||++|||++++ |.|
T Consensus 209 ~~~~~~~~S~~g~~v--------~APG~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~l 279 (320)
T 2z30_A 209 SNDNIASFSNRQPEV--------SAPGVDILSTY-PDDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDI 279 (320)
T ss_dssp TTSCBCTTSCSSCSE--------EEECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCC
T ss_pred CCCCcCcccCCCCCE--------EeCCCCeEEec-cCCCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCC
Confidence 999999999999975 34899999985 46678999999999999999999999998 999
Q ss_pred CHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHh
Q psy5372 402 TWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAK 453 (586)
Q Consensus 402 t~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~ 453 (586)
+++|||++|+.||++..... ++..||||+||+.+||++|+
T Consensus 280 t~~~v~~~L~~ta~~~~~~g------------~~~~~G~G~vd~~~A~~~a~ 319 (320)
T 2z30_A 280 SKNTVRGILHITADDLGPTG------------WDADYGYGVVRAALAVQAAL 319 (320)
T ss_dssp STTSHHHHHHHHSBCCSSSS------------SBTTTBTCBCCHHHHHHHHH
T ss_pred CHHHHHHHHHhhCccCCCCC------------CCCCcCCceeCHHHHHHHHh
Confidence 99999999999999875322 46789999999999999886
|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-53 Score=444.82 Aligned_cols=289 Identities=25% Similarity=0.332 Sum_probs=240.7
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCC------
Q psy5372 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEK------ 193 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~------ 193 (586)
|+||+|.+||+|.+. .+|++.++|+ .+++|+||+||||||||+ +||+|.+++.. +++|..+.
T Consensus 2 PnDp~~~~qW~l~~~--------~~i~~~~aw~-~g~~G~gV~VaViDtGi~-~hp~l~~~~~~--~~~~~~~~~~~~d~ 69 (340)
T 3lpc_A 2 PNDQHYREQWHYFDR--------YGVKADKVWD-MGFTGQNVVVAVVDTGIL-HHRDLNANVLP--GYDFISNSQISLDG 69 (340)
T ss_dssp CCCTTGGGCHHHHST--------TSCCHHHHHH-HTCSCTTCEEEEEESCBC-CCTTTGGGBCC--CEECCCCHHHHCSS
T ss_pred CCCcchhhccCCCCc--------CCCCHHHHHH-hcCCCCCeEEEEEcCCCC-CChhhhccccc--CccccCCccccccC
Confidence 899999999999762 4699999999 999999999999999997 99999998765 45554331
Q ss_pred ----CCC----------------CCCCCC-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC---CchhHHH
Q psy5372 194 ----WDI----------------TPRYED-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG---ETTDLIE 249 (586)
Q Consensus 194 ----~~~----------------~~~~~~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~---~~~~~~~ 249 (586)
.+| .+.... |..+|||||||||++..+|+.|+.||||+|+|+++|+++. ..+++++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ 149 (340)
T 3lpc_A 70 DGRDADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIGVAGVAYGAKVVPVRALGRCGGYDSDISD 149 (340)
T ss_dssp SSSBSCCBCCCCCBCTTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSSCCCTTTTSEEEEEECCBTTBCCHHHHHH
T ss_pred CCccCCccccccccccccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCcceeecCCCEEEEEEEecCCCCcHHHHHH
Confidence 111 111111 6789999999999999999999999999999999999864 4778999
Q ss_pred HHHhhhc---------CCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCC
Q psy5372 250 SKALQFG---------LDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADG 320 (586)
Q Consensus 250 a~~~~~~---------~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~ 320 (586)
++.|+.. .++++|||||||.... ....+.++++++.+ +|++||+||||++... ....
T Consensus 150 ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~~~------~~~~~~~~~~~a~~-----~gi~vV~AAGN~g~~~---~~~~ 215 (340)
T 3lpc_A 150 GLYWAAGGRIAGIPENRNPAKVINMSLGSDGQ------CSYNAQTMIDRATR-----LGALVVVAAGNENQNA---SNTW 215 (340)
T ss_dssp HHHHHHTCCCTTSCCCSSCCSEEEECCCEESC------CCHHHHHHHHHHHH-----HTCEEEEECCSSSSBG---GGEE
T ss_pred HHHHHhcccccccccccCCCeEEEeCcCCCCC------cchhHHHHHHHHHh-----CCcEEEEeCCCCCCCC---CCcC
Confidence 9999885 3689999999997431 23357788888877 5999999999998752 2235
Q ss_pred CCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCC------CeeeccCCCCchHHHHHHHHHHH
Q psy5372 321 YINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHN------TCTCEHSGTSAAAPIAAGVLALA 394 (586)
Q Consensus 321 ~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~------~~~~~~~GTS~AaP~VAG~aALl 394 (586)
|+..+++|+|||++..+.++.||++|+..++. +||..|+++...+ .+|..++|||||||+|||++|||
T Consensus 216 Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~di~------ApG~~i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll 289 (340)
T 3lpc_A 216 PTSCNNVLSVGATTSRGIRASFSNYGVDVDLA------APGQDILSTVDSGTRRPVSDAYSFMAGTSMATPHVSGVAALV 289 (340)
T ss_dssp TTTSSSCEEEEEECTTSSBCTTCCBSTTCCEE------EECSSEEEEEESCSSSCCSEEEEEECSHHHHHHHHHHHHHHH
T ss_pred CccCCceEEEecCCCCCCcCCCCCCCCCceEE------ecCCCeecccCCCCcCCCCCcceecccHhHHHHHHHHHHHHH
Confidence 77889999999999999999999999987774 4889999886543 35889999999999999999999
Q ss_pred Hhh-C---CCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHh
Q psy5372 395 LEA-N---PNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAK 453 (586)
Q Consensus 395 ~~~-~---p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~ 453 (586)
+++ + |.|+++|||++|+.||++.... ++..||||+||+.+||+.+.
T Consensus 290 ~~~~~~~~p~lt~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~vd~~~Av~~~l 339 (340)
T 3lpc_A 290 ISAANSVNKNLTPAELKDVLVSTTSPFNGR-------------LDRALGSGIVDAEAAVNSVL 339 (340)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHTCBCCSSC-------------CSSCCCSSBCCHHHHHHHHH
T ss_pred HHhhhhhCCCCCHHHHHHHHHhcCCcCCCC-------------CCCCcccceecHHHHHHHHh
Confidence 998 5 9999999999999999987421 36789999999999998874
|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-53 Score=428.65 Aligned_cols=268 Identities=23% Similarity=0.265 Sum_probs=230.1
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
..||+| ..|+++++|+ .+++|+||+|+|||||||.+||+|+. ..+++|..+...+. |..
T Consensus 3 ~~~w~l-----------~~i~~~~~~~-~g~~G~gv~VaViDtGid~~h~~l~~----~~g~~~~~~~~~~~-----d~~ 61 (274)
T 1r0r_E 3 TVPYGI-----------PLIKADKVQA-QGFKGANVKVAVLDTGIQASHPDLNV----VGGASFVAGEAYNT-----DGN 61 (274)
T ss_dssp CCCTHH-----------HHTTHHHHHH-HTCSCTTCEEEEEESCCCTTCTTCCE----EEEEECSTTCCTTC-----CSS
T ss_pred cCCCch-----------hhcCCHHHHh-cCCCCCCCEEEEEcCCCCCCCHhHcC----CCCccccCCCCCCC-----CCC
Confidence 358999 5688999999 99999999999999999999999942 23566665543321 789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchH
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGK 281 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ 281 (586)
+|||||||||++. +|+.++.||||+|+|+.+|+++. ..++++++++|+.. ++++|||||||.... ..
T Consensus 62 gHGT~vAgiia~~-~~~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~-~~~~Vin~S~G~~~~-------~~ 132 (274)
T 1r0r_E 62 GHGTHVAGTVAAL-DNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATT-NGMDVINMSLGGASG-------ST 132 (274)
T ss_dssp SHHHHHHHHHHCC-SSSSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHH-TTCSEEEECEEBSSC-------CH
T ss_pred CCHHHHHHHHHcc-CCCCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHH-cCCCEEEeCCCCCCC-------cH
Confidence 9999999999997 77889999999999999999874 36788999999988 789999999998542 23
Q ss_pred HHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCC
Q psy5372 282 LSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP 361 (586)
Q Consensus 282 ~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg 361 (586)
.+.++++++.+ +|+++|+||||++..........|+..+++|+|||++.++.++.||++|+..++. +||
T Consensus 133 ~~~~ai~~a~~-----~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~------APG 201 (274)
T 1r0r_E 133 AMKQAVDNAYA-----RGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVM------APG 201 (274)
T ss_dssp HHHHHHHHHHH-----TTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTTSCBCTTCCCSTTEEEE------EEC
T ss_pred HHHHHHHHHHH-----CCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCCCCcCccCCCCCCceEE------eCC
Confidence 67888888876 6999999999999864444455677889999999999999999999999988774 488
Q ss_pred CceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCccccc
Q psy5372 362 VKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFG 441 (586)
Q Consensus 362 ~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G 441 (586)
..|+++. .++.|..++|||||||+|||++|||++++|+|+++|||++|++||++.. .+..||||
T Consensus 202 ~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G 265 (274)
T 1r0r_E 202 AGVYSTY-PTNTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG---------------SSFYYGKG 265 (274)
T ss_dssp SSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------------CHHHHTTC
T ss_pred CCeEeec-CCCCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------------CCCCcccC
Confidence 9999985 4667899999999999999999999999999999999999999999873 25689999
Q ss_pred ccCHHHHHH
Q psy5372 442 LINTFKLVS 450 (586)
Q Consensus 442 ~vna~~Av~ 450 (586)
+||+.+||+
T Consensus 266 ~~~~~~A~~ 274 (274)
T 1r0r_E 266 LINVEAAAQ 274 (274)
T ss_dssp BCCHHHHTC
T ss_pred ccCHHHHhC
Confidence 999999973
|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-53 Score=429.80 Aligned_cols=272 Identities=25% Similarity=0.286 Sum_probs=233.6
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
.||+| ..|++.++|+ .+++|+||+|||||+|||.+||+|+. ..+++|..++.++. .|..+
T Consensus 4 ~~w~l-----------~~i~~~~~~~-~g~~G~gv~VaViDtGid~~h~~l~~----~~g~~~~~~~~~~~----~d~~g 63 (281)
T 1to2_E 4 VPYGV-----------SQIKAPALHS-QGYTGSNVKVAVIDSGIDSSHPDLKV----AGGASMVPSETNPF----QDNNS 63 (281)
T ss_dssp CCHHH-----------HHTTHHHHHH-HTCSCTTCEEEEEESCCCTTCTTCCE----EEEEECCTTCCCTT----CCSSS
T ss_pred CCcch-----------hhcChHHHHh-cCCCCCCCEEEEEcCCCCCCCHHHcC----cCCccccCCCCCCC----CCCCC
Confidence 58999 5688999999 99999999999999999999999953 23566665544431 17899
Q ss_pred hHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHH
Q psy5372 207 HGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKL 282 (586)
Q Consensus 207 HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~ 282 (586)
|||||||||++. +|+.++.||||+|+|+.+|+++.. .++++++++|+.. ++++|||||||.... ...
T Consensus 64 HGT~vAgiia~~-~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~-~~~~Vin~S~G~~~~-------~~~ 134 (281)
T 1to2_E 64 HGTHVAGTVAAL-NNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIA-NNMDVINMSLGGPSG-------SAA 134 (281)
T ss_dssp HHHHHHHHHHCC-SSSSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHH-TTCSEEEECEEBSCC-------CHH
T ss_pred cHHHHHHHHhcc-CCCCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHH-CCCcEEEECCcCCCC-------CHH
Confidence 999999999998 788899999999999999998743 6788999999988 789999999997542 236
Q ss_pred HHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCC
Q psy5372 283 SKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362 (586)
Q Consensus 283 ~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~ 362 (586)
+.++++++.+ +|+++|+||||++..........|+..+++|+|||++..+.++.||++|+..++. +||.
T Consensus 135 ~~~ai~~a~~-----~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~~~di~------APG~ 203 (281)
T 1to2_E 135 LKAAVDKAVA-----SGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPELDVM------APGV 203 (281)
T ss_dssp HHHHHHHHHH-----TTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTTSCBCTTCCCSTTCCEE------EECS
T ss_pred HHHHHHHHHH-----CCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCCCCcCCcCCCCCCceEE------ecCC
Confidence 7888888876 6999999999999864444556678889999999999999999999999988774 4889
Q ss_pred ceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccc
Q psy5372 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGL 442 (586)
Q Consensus 363 ~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~ 442 (586)
.|+++. +++.|..++|||||||+|||++|||++++|+|+++|||++|+.||++.+ .+..||||+
T Consensus 204 ~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~ 267 (281)
T 1to2_E 204 SIQSTL-PGNKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG---------------DSFYYGKGL 267 (281)
T ss_dssp SEEEEE-TTTEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS---------------CHHHHTTCB
T ss_pred CeEeec-CCCCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC---------------CCCCcccce
Confidence 999985 5677899999999999999999999999999999999999999999874 256899999
Q ss_pred cCHHHHHHHHhc
Q psy5372 443 INTFKLVSLAKN 454 (586)
Q Consensus 443 vna~~Av~~a~~ 454 (586)
||+.+|++.++.
T Consensus 268 v~~~~a~~~~~~ 279 (281)
T 1to2_E 268 INVQAAAQHHHH 279 (281)
T ss_dssp CCHHHHTSSSCC
T ss_pred ecHHHHhhhhhc
Confidence 999999976654
|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-53 Score=422.63 Aligned_cols=263 Identities=23% Similarity=0.294 Sum_probs=227.0
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
..||+| ..|+++++|+ .+++|+||+|+|||||| .+||+|+. ..+++|..++.++. |..
T Consensus 3 ~~~W~l-----------~~i~~~~a~~-~g~~G~gv~VaViDtGi-~~h~~l~~----~~~~~~~~~~~~~~-----d~~ 60 (269)
T 1gci_A 3 SVPWGI-----------SRVQAPAAHN-RGLTGSGVKVAVLDTGI-STHPDLNI----RGGASFVPGEPSTQ-----DGN 60 (269)
T ss_dssp CCCHHH-----------HHTTHHHHHH-TTCSCTTCEEEEEESCC-CCCTTCCE----EEEEECSTTCCSCS-----CSS
T ss_pred cCCcCh-----------hhcCcHHHHh-cCCCCCCCEEEEECCCC-CCCHhhcc----cCCcccCCCCCCCC-----CCC
Confidence 358999 5688999999 99999999999999999 89999942 23567766543322 789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchH
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGK 281 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ 281 (586)
+|||||||+|++. +|+.++.||||+|+|+++|+++. ..++++++++|+.. ++++|||||||.... ..
T Consensus 61 gHGT~vAgiia~~-~~~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~-~~~~Vin~S~G~~~~-------~~ 131 (269)
T 1gci_A 61 GHGTHVAGTIAAL-NNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGN-NGMHVANLSLGSPSP-------SA 131 (269)
T ss_dssp SHHHHHHHHHHCC-CSSSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHH-TTCSEEEECCCBSSC-------CH
T ss_pred CChHHHHHHHhcC-cCCCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHH-CCCeEEEeCCCCCCC-------CH
Confidence 9999999999997 78889999999999999999864 36788999999988 789999999998542 23
Q ss_pred HHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCC
Q psy5372 282 LSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP 361 (586)
Q Consensus 282 ~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg 361 (586)
.+.++++++.. +|+++|+||||++.. ....|+..+++|+|||++.++.++.||++|+..++. +||
T Consensus 132 ~~~~ai~~a~~-----~gv~vV~AaGN~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~------APG 196 (269)
T 1gci_A 132 TLEQAVNSATS-----RGVLVVAASGNSGAG----SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIV------APG 196 (269)
T ss_dssp HHHHHHHHHHH-----TTCEEEEECCSSCCS----SCCBTTTSTTEEEEEEECTTSCBCTTCCCSTTEEEE------EEC
T ss_pred HHHHHHHHHHH-----CCCEEEEecCCCCCC----CCcCCccCCCeEEEEeecCCCCCCCCCCCCCCcceE------ecC
Confidence 67888888876 699999999999875 234577889999999999999999999999988774 488
Q ss_pred CceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCccccc
Q psy5372 362 VKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFG 441 (586)
Q Consensus 362 ~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G 441 (586)
..|+++. +++.|..++|||||||+|||++|||++++|+|+++|||++|++||++.+ .+..||||
T Consensus 197 ~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~~~~~G~G 260 (269)
T 1gci_A 197 VNVQSTY-PGSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------STNLYGSG 260 (269)
T ss_dssp SSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------CHHHHTTC
T ss_pred CCeEeec-CCCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------CCCCcccC
Confidence 9999985 5677899999999999999999999999999999999999999999873 25679999
Q ss_pred ccCHHHHHH
Q psy5372 442 LINTFKLVS 450 (586)
Q Consensus 442 ~vna~~Av~ 450 (586)
+||+.+||+
T Consensus 261 ~vn~~~A~~ 269 (269)
T 1gci_A 261 LVNAEAATR 269 (269)
T ss_dssp BCCHHHHTC
T ss_pred ccCHHHHcC
Confidence 999999973
|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-53 Score=441.92 Aligned_cols=291 Identities=18% Similarity=0.138 Sum_probs=230.3
Q ss_pred CCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCC--CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCC
Q psy5372 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGA--GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDI 196 (586)
Q Consensus 119 ~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~--gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~ 196 (586)
.|+||++..||+| ..|++.++|+ . ++|+ ||+||||||||+ +||+|.+++.. +++|..+.. +
T Consensus 15 ~~~d~~~~~~W~l-----------~~i~~~~aw~-~-~~G~~~gv~VaViDsGid-~Hp~l~~~~~~--~~~~~~~~~-~ 77 (347)
T 2iy9_A 15 ISASARAEKPWYF-----------DAIGLTETTM-S-LTDKNTPVVVSVVDSGVA-FIGGLSDSEFA--KFSFTQDGS-P 77 (347)
T ss_dssp --------CCHHH-----------HHHTCCHHHH-H-TSCTTSCCEEEEEESCCC-CCGGGTTCEEE--EEECBTTCC-S
T ss_pred CCCCcccccCcch-----------hhCChHHHHH-H-hcCCCCCCEEEEEcCCCc-CChhhhcCccc--CCcccCCCC-C
Confidence 4899999999999 4577899999 6 8999 999999999999 99999987654 566665422 2
Q ss_pred CCCCCC-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC-chhHHHHHHhhhcCC------CCeEEEcCCC
Q psy5372 197 TPRYED-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE-TTDLIESKALQFGLD------KVDIYSGSWG 268 (586)
Q Consensus 197 ~~~~~~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~-~~~~~~a~~~~~~~~------~~~Vin~S~G 268 (586)
.+.... |..+|||||||||++. .|+.||||+|+|+++|+++.. ..+++++++|+.. + +++|||||||
T Consensus 78 ~~~~~~~d~~gHGT~vAgiia~~----~g~~GvAp~a~l~~~~v~~~~~~~~~~~ai~~a~~-~~~~~~~~~~Vin~S~G 152 (347)
T 2iy9_A 78 FPVKKSEALYIHGTAMASLIASR----YGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMS-NVFLAPGEEKIINISGG 152 (347)
T ss_dssp SCCSSSHHHHHHHHHHHHHHHCS----SSSCCSSTTCEEEEEECCSSBCTTHHHHHHHHHHT-CTTSCTTEEEEEEESSC
T ss_pred CCCCCCCCCCCcHHHHHHHHhcc----cCCcccCCCCEEEEEEEecCCCHHHHHHHHHHHHh-hhhcccCCceEEEeccc
Confidence 211111 6789999999999997 567999999999999998643 4489999999987 5 8999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC---CCCCCCCCCc----------eEEEEeeecC
Q psy5372 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN---CAADGYINSI----------YTIAIASARE 335 (586)
Q Consensus 269 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~---~~~~~~~~~~----------~vi~Vga~~~ 335 (586)
.... ......+.++++++.. +|++||+||||+|...+. .....|+..+ ++|+|||++.
T Consensus 153 ~~~~----~~~~~~~~~ai~~a~~-----~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~ 223 (347)
T 2iy9_A 153 QKGV----ASASVWTELLSRMGRN-----NDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQ 223 (347)
T ss_dssp BCCC-----CCHHHHHHHHHHHHH-----TSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECC
T ss_pred cCCC----CCcCHHHHHHHHHHHh-----CCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEccc
Confidence 7532 1234567888888876 699999999999986431 2345567778 9999999999
Q ss_pred --CCCCC-------CCCCCCC-cceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHH
Q psy5372 336 --DGQSP-------FYSEECT-GLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRD 405 (586)
Q Consensus 336 --~~~~a-------~~S~~G~-~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~ 405 (586)
++.++ .||++|+ ..++ .+||..|+++. .++.|..++|||||||+|||++|||++++|+|+++|
T Consensus 224 ~~~g~~~~~~~~~~~fS~~G~~~~di------~APG~~i~s~~-~~~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~ 296 (347)
T 2iy9_A 224 YRKGETPVLHGGGITGSRFGNNWVDI------AAPGQNITFLR-PDAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATE 296 (347)
T ss_dssp CCTTSCCCBCCCSSSCBCBCTTTCSE------EEECSSEEEEC-TTSCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred CCCCceecccCCCCCCCCCCCCCCEE------EeCCCCeEeec-CCCCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999 9999999 6666 45899999996 456789999999999999999999999999999999
Q ss_pred HHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhccCCCCC
Q psy5372 406 CQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPA 460 (586)
Q Consensus 406 v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~~~ 460 (586)
||++|+.||++..... +..||||+||+.+||+.++.+...+.
T Consensus 297 v~~~L~~tA~~~~~~~-------------~~~~G~G~ld~~~A~~~~~~~~~~~~ 338 (347)
T 2iy9_A 297 LKRTLLESADKYPSLV-------------DKVTEGRVLNAEKAISMFCKKNYIPV 338 (347)
T ss_dssp HHHHHHHHSEECGGGT-------------TTSGGGEECCHHHHHHHHHC------
T ss_pred HHHHHHHhCccCCCCC-------------CccccCCEecHHHHHHHHHhcCCCCC
Confidence 9999999999875322 36899999999999999999876554
|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-53 Score=438.29 Aligned_cols=291 Identities=21% Similarity=0.193 Sum_probs=235.6
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCC-CCCC
Q psy5372 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKW-DITP 198 (586)
Q Consensus 120 ~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~-~~~~ 198 (586)
..||.+..||+| ..|++.++|+ .+++|+||+|||||||||.+||+|.+++.. +++|..+.. ++.+
T Consensus 14 ~~~~~~~~~w~l-----------~~i~~~~aw~-~~~~G~gv~VaViDtGid~~Hp~l~~~~~~--~~~~~~~~~~~~~~ 79 (327)
T 2x8j_A 14 KVSALSEVPMGV-----------EIVEAPAVWR-ASAKGAGQIIGVIDTGCQVDHPDLAERIIG--GVNLTTDYGGDETN 79 (327)
T ss_dssp EESCCBSCCHHH-----------HHTTHHHHHH-HHGGGTTCEEEEEESCCCTTCTTTGGGEEE--EEECSSGGGGCTTC
T ss_pred ccccccccCcch-----------hhcChHHHHh-cCCCCCCCEEEEEcCCCCCCChhHhhcccC--CccccCCCCCCCCC
Confidence 357788899999 5678999999 899999999999999999999999987654 456654421 1111
Q ss_pred CCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcC-----CCCeEEEcCCCC
Q psy5372 199 RYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGL-----DKVDIYSGSWGP 269 (586)
Q Consensus 199 ~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~-----~~~~Vin~S~G~ 269 (586)
. .|..+|||||||||++. +|+.|+.||||+|+|+++|+++. ..++++++++|++.. ++++|||||||.
T Consensus 80 ~--~d~~gHGT~VAgiia~~-~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~ 156 (327)
T 2x8j_A 80 F--SDNNGHGTHVAGTVAAA-ETGSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLGG 156 (327)
T ss_dssp C--CCSSSHHHHHHHHHHCC-CCSSBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEEECEEB
T ss_pred C--CCCCCchHHHHHHHhcc-CCCCCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEEECCCc
Confidence 1 17899999999999998 67889999999999999999974 367889999998863 689999999997
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCC-CCCCCCCCCceEEEEeeecCCCCCCCCCCCCCc
Q psy5372 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN-CAADGYINSIYTIAIASAREDGQSPFYSEECTG 348 (586)
Q Consensus 270 ~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~-~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~ 348 (586)
... ...+.++++++.. +|++||+||||+|...+. .....|+..+++|+|||++.++.++.||++|+.
T Consensus 157 ~~~-------~~~~~~ai~~a~~-----~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~~ 224 (327)
T 2x8j_A 157 PTD-------SEELHDAVKYAVS-----NNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFDLRLSDFTNTNEE 224 (327)
T ss_dssp SCC-------CHHHHHHHHHHHH-----TTCEEEEECCCT---------TCBTTTSTTSEEEEEECTTCCBSCC---CCC
T ss_pred CCC-------CHHHHHHHHHHHH-----CCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCCCCCCCccCCCCC
Confidence 542 2367888888876 699999999999975322 234557778999999999999999999999998
Q ss_pred ceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCCcCCCCCCC
Q psy5372 349 LIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA-----NPNMTWRDCQHILAWTSEREPLSHVS 423 (586)
Q Consensus 349 ~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~-----~p~lt~~~v~~~L~~tA~~~~~~~~~ 423 (586)
.++. +||..|+++. .++.|..++|||||||+|||++|||+++ +|.|++.|||++|+.||++.+.
T Consensus 225 ~di~------APG~~i~s~~-~~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---- 293 (327)
T 2x8j_A 225 IDIV------APGVGIKSTY-LDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF---- 293 (327)
T ss_dssp CSEE------EECSSEEEEC-STTCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS----
T ss_pred ceEe------cCcCceEeec-CCCCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC----
Confidence 7774 4889999985 4566889999999999999999999999 9999999999999999998742
Q ss_pred CccccCCCcccCCcccccccCHHHHHHHHhccCCCCC
Q psy5372 424 GWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPA 460 (586)
Q Consensus 424 ~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~~~ 460 (586)
.+..||||+||+.+|++++++|.....
T Consensus 294 ----------~~~~~G~G~vd~~~A~~~~~~~~~~~~ 320 (327)
T 2x8j_A 294 ----------TAQAEGNGFLTLDLVERITGQFTEKGK 320 (327)
T ss_dssp ----------CHHHHTTCEECTTHHHHHTTCCC----
T ss_pred ----------CCCceeeeEECHHHHHHhhhccccccc
Confidence 256899999999999999999977643
|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=436.92 Aligned_cols=363 Identities=18% Similarity=0.197 Sum_probs=264.7
Q ss_pred CCCCchHHHHcCCCCCCCcEEEEEecCccC------CCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHh
Q psy5372 143 LDLNIVPVYQELNINGAGVNIIIIDDGMEY------THEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216 (586)
Q Consensus 143 ~~i~~~~aw~~~~~~G~gv~VaViDtGid~------~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia 216 (586)
..|+++.+|+..+++|+||+|||||||||. .||+|.+++.. .++|.+.. ++. |..+|||||||+|+
T Consensus 6 ~~i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~i~~--~~~~~~~~-~~~-----d~~gHGT~VAgiia 77 (434)
T 1wmd_A 6 GIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITA--LYALGRTN-NAN-----DTNGHGTHVAGSVL 77 (434)
T ss_dssp HHTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEEE--EEETTTTT-CCC-----CSSSHHHHHHHHHH
T ss_pred hhhCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCCEee--eccccCCC-CCC-----CCCCcHHHHHHHHH
Confidence 458899999746999999999999999999 79999987654 45665431 111 78899999999999
Q ss_pred ccCCCCCcceeeecCcEEEEEEccCCC------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHH
Q psy5372 217 MKPNNSKCGVGVCYGARVGGVKLLDGE------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRG 290 (586)
Q Consensus 217 ~~~~n~~g~~GVAp~a~l~~~~v~~~~------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a 290 (586)
|. +.++.||||+|+|+.+|+++.. ..++.++++++.. ++++|||||||...... +. ....+++++
T Consensus 78 g~---g~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~-~g~~Vin~S~G~~~~~~----~~-~~~~~id~~ 148 (434)
T 1wmd_A 78 GN---GSTNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYS-AGARIHTNSWGAAVNGA----YT-TDSRNVDDY 148 (434)
T ss_dssp CC---SSSSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHH-TTCSEEEECCCBCCTTC----CC-HHHHHHHHH
T ss_pred cC---CCCceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHh-cCCeEEEecCCCCcCCc----CC-HHHHHHHHH
Confidence 85 3457899999999999998642 3578899999887 78999999999864211 11 345666666
Q ss_pred HHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecC-----------CCCCCCCCCCCCcceeccccCCCC
Q psy5372 291 IREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARE-----------DGQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 291 ~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~-----------~~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
+.. +|++||+||||++.. ......|+..+++|+|||++. .+.++.||++|+..+...+++..+
T Consensus 149 ~~~----~gvlvV~AAGN~g~~--~~~~~~Pa~~~~vitVga~~~~~~~~~~~~~~~~~~a~fS~~G~~~~g~~kpdi~A 222 (434)
T 1wmd_A 149 VRK----NDMTILFAAGNEGPN--GGTISAPGTAKNAITVGATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMA 222 (434)
T ss_dssp HHH----SSCEEEEECCSCTTS--SSCCCBSTTCSSSEEEEEECCSCGGGCGGGSCTTSBCTTSCCCCCTTSCCCCCEEE
T ss_pred HhC----CCeEEEEECCCCCCC--CcccCCcccCCccEEEecccccCcccCcccCCCCccccccCCCCCCCCCCCceEEc
Confidence 532 799999999999984 234456788999999999998 788999999999876666666778
Q ss_pred CCCceEEecCC-----------CCeeeccCCCCchHHHHHHHHHHHHhhCCCC-----CHHHHHHHHHhcCCcCCCCCCC
Q psy5372 360 DPVKIITTDVH-----------NTCTCEHSGTSAAAPIAAGVLALALEANPNM-----TWRDCQHILAWTSEREPLSHVS 423 (586)
Q Consensus 360 pg~~i~st~~~-----------~~~~~~~~GTS~AaP~VAG~aALl~~~~p~l-----t~~~v~~~L~~tA~~~~~~~~~ 423 (586)
||..|+++... +..|..++|||||||+|||++|||++++|++ ++++||++|++||++.....
T Consensus 223 pG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~~-- 300 (434)
T 1wmd_A 223 PGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGY-- 300 (434)
T ss_dssp ECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCS--
T ss_pred CCCCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCCC--
Confidence 99999998532 4568899999999999999999999998865 89999999999998754322
Q ss_pred CccccCCCcccCCcccccccCHHHHHHHHhccCCCCCcceeeeeeecCcceecCCC------------CceEEEEEecCC
Q psy5372 424 GWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYA------------SSWQRSFNITPC 491 (586)
Q Consensus 424 ~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~------------~~~~~~~~~~~~ 491 (586)
++..+|||++|+.+|++.+. ... ...+..+ ..+++++.+++.
T Consensus 301 ----------~~~~~G~G~vd~~~a~~~~~---------~~~-------~~~~~~~~~~~~~~~~~~~~~l~vtl~~~~~ 354 (434)
T 1wmd_A 301 ----------PNGNQGWGRVTLDKSLNVAY---------VNE-------SSSLSTSQKATYSFTATAGKPLKISLVWSDA 354 (434)
T ss_dssp ----------SCTTTTTCBCCHHHHHTCEE---------EEE-------EEEECTTCEEEEEEEECTTSCEEEEEECCCC
T ss_pred ----------CCccCCcCeEeHHHhcccce---------ecc-------cccccCCceEEEEEecCCCCeEEEEEEEECC
Confidence 46789999999999996541 000 0112122 223333333322
Q ss_pred CCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCC-CCCCCCCCcccceEeeeeecCCCCCceEEEEEEE
Q psy5372 492 SDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPR-PQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFD 570 (586)
Q Consensus 492 ~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~-~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d 570 (586)
.+... ..+...+||+|+|++|+|++..-.... ..+...+..++ ....++.+...|+|+|+|..
T Consensus 355 p~~~~-------------~~~~l~ndldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n---~E~v~~~~~~~G~y~i~V~~ 418 (434)
T 1wmd_A 355 PASTT-------------ASVTLVNDLDLVITAPNGTQYVGNDFTSPYNDNWDGRNN---VENVFINAPQSGTYTIEVQA 418 (434)
T ss_dssp CCCTT-------------CSCCCCSEEEEEEECTTSCEEETTCCSSSTTSCCCSSCS---EEEEEESSCCSEEEEEEEEE
T ss_pred CCCCc-------------cccceeeccCEEEEeCCCCEEeCCCccccccCCCCCCCc---eeEEEEcCCCCeEEEEEEEE
Confidence 21110 122356899999999999975311111 11111121221 22355677889999999987
Q ss_pred CC
Q psy5372 571 TK 572 (586)
Q Consensus 571 ~~ 572 (586)
..
T Consensus 419 ~~ 420 (434)
T 1wmd_A 419 YN 420 (434)
T ss_dssp EE
T ss_pred Ee
Confidence 64
|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=420.71 Aligned_cols=287 Identities=23% Similarity=0.234 Sum_probs=231.2
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCC
Q psy5372 123 EWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYED 202 (586)
Q Consensus 123 p~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (586)
|.+..||+| ..|++.++|+ .+++|+||+|||||||||.+||+|.+++.. +++|....... +....
T Consensus 2 p~~~~~W~l-----------~~i~~~~~w~-~~~~G~gv~VaViDtGvd~~H~~l~~~~~~--~~~~~~~~~~~-~~~~~ 66 (310)
T 2ixt_A 2 ASQQIPWGI-----------KAIYNNDTLT-STTGGSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPI-NNSCT 66 (310)
T ss_dssp CSCSSCHHH-----------HHHHTCTTCC-CCCCCTTCEEEEEESCCCTTCTTTTTTEEE--EEESSSSSSCE-ETCCC
T ss_pred CcccCCCch-----------hhcCchhhhh-ccCCCCCcEEEEEecCCCCCCHHHhhcccc--cccccCCCCCC-CCCCC
Confidence 667889999 4577889999 999999999999999999999999987654 56666542211 11111
Q ss_pred CCCChHHHHHHHHhccC-CCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCC-----eEEEcCCCCCCC
Q psy5372 203 PRNKHGTRCAGELVMKP-NNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKV-----DIYSGSWGPPDD 272 (586)
Q Consensus 203 d~~~HGT~vAgiia~~~-~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~-----~Vin~S~G~~~~ 272 (586)
|..+|||||||||++.. +|+.++.||||+|+|+++|+++. ..++++++++|+.. +++ +|||||||....
T Consensus 67 d~~gHGT~vAgiia~~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~-~~~~~~~~~Vin~S~G~~~~ 145 (310)
T 2ixt_A 67 DRNGHGTHVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAAD-QATATGTKTIISMSLGSSAN 145 (310)
T ss_dssp CSSSHHHHHHHHHHCBCCTTSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHH-HHHHHTCCEEEEECCCBSSC
T ss_pred CCCCCHHHHHHHHhccCCCCCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHH-hhhccCCCeEEEEcCCCCCC
Confidence 78999999999999985 67788999999999999999864 36788999999876 555 999999998642
Q ss_pred CCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeec---CCC--CCCCCCCCCC
Q psy5372 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR---EDG--QSPFYSEECT 347 (586)
Q Consensus 273 ~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~---~~~--~~a~~S~~G~ 347 (586)
...+.++++++.+ +|+++|+||||++.... ....|+..+++|+|||++ .++ .++.||++|+
T Consensus 146 -------~~~~~~ai~~a~~-----~gv~vV~AAGN~g~~~~--~~~~Pa~~~~vi~Vga~~~~~~~g~~~~~~~S~~G~ 211 (310)
T 2ixt_A 146 -------NSLISSAVNYAYS-----KGVLIVAAAGNSGYSQG--TIGYPGALPNAIAVAALENVQQNGTYRVADYSSRGY 211 (310)
T ss_dssp -------CHHHHHHHHHHHH-----TTCEEEEECCSCCSSTT--CCCBTTTSTTSEEEEEEEEEEETTEEEECTTSCCCC
T ss_pred -------CHHHHHHHHHHHh-----CCcEEEEcCCCCCCCCC--CCCCcccCCCeeEEEeccccccCCCeeeccccCCCC
Confidence 2367888888876 69999999999987532 334577889999999999 777 8899999998
Q ss_pred ccee------ccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCC
Q psy5372 348 GLIA------TAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 348 ~~~~------~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 421 (586)
.... ...++..+||..|+++. .++.|..++|||||||+|||++|||++++|+|+++|||++|+.||++.+...
T Consensus 212 ~~~~g~~~~~~~~~di~ApG~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 290 (310)
T 2ixt_A 212 ISTAGDYVIQEGDIEISAPGSSVYSTW-YNGGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG 290 (310)
T ss_dssp TTTTTSSSCCTTCCCEEEECSSEEEEC-TTSSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCB
T ss_pred ccCCccccccCCCeeEECCCCCEeeec-CCCCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCC
Confidence 3110 01233356899999985 4567889999999999999999999999999999999999999999886543
Q ss_pred CCCccccCCCcccCCcccccccCH
Q psy5372 422 VSGWERNARDLWFHSAYGFGLINT 445 (586)
Q Consensus 422 ~~~w~~n~~g~~~~~~~G~G~vna 445 (586)
. .+++..++..||||++|+
T Consensus 291 --~---~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 291 --G---YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp --S---TTCCSSSBTTTBTCBCCC
T ss_pred --C---cccccCCccccccceeec
Confidence 1 234455789999999985
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=426.04 Aligned_cols=281 Identities=19% Similarity=0.230 Sum_probs=222.5
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
..||+|+ .|+++++|+ . +|+||+|||||||||.+||+|.+++.. ++++........| .|..
T Consensus 3 ~~~W~l~-----------~i~~~~~w~-~--~g~gv~VaViDtGvd~~Hp~l~~~~~~--~~~~~~~~~~~~~---~d~~ 63 (441)
T 1y9z_A 3 TTPWGQT-----------FVGATVLSD-S--QAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQP---GNNN 63 (441)
T ss_dssp CCCHHHH-----------HTTCSSSCC-T--TGGGCEEEEEESCCCTTSTTTTTSEEE--ECCCTTSCCTTCC---CSSC
T ss_pred CCCCChh-----------hcChhhhhh-c--CCCCcEEEEEcCCCCCCChhHhcCccc--CcccCCCCCCCCC---CCCC
Confidence 3589994 466788999 4 477999999999999999999987543 3344322111111 1778
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCc--EEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCc
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGA--RVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGP 279 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a--~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~ 279 (586)
+|||||||||++.. |+.++.||||+| +|+.+|+++. ..++++++++|++...+++|||||||....
T Consensus 64 gHGT~vAgiia~~~-~~~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~~~~------- 135 (441)
T 1y9z_A 64 AHGTHVAGTIAAIA-NNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGS------- 135 (441)
T ss_dssp CHHHHHHHHHHCCC-SSSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCBSCC-------
T ss_pred CcHHHHHHHHhccc-CCCCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCCCCCC-------
Confidence 99999999999985 567899999995 9999999863 478899999999984499999999997532
Q ss_pred hHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCC
Q psy5372 280 GKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 280 ~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
...+.++++++.+ +|++||+||||++... ...|+..+++|+|||++.++.++.||++|+.+++.+++
T Consensus 136 ~~~~~~ai~~a~~-----~gv~vV~AAGN~g~~~----~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG---- 202 (441)
T 1y9z_A 136 TTTERNALNTHYN-----NGVLLIAAAGNAGDSS----YSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPG---- 202 (441)
T ss_dssp BHHHHHHHHHHHH-----TTCEEEEECCSSSSSB----CCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEEC----
T ss_pred CHHHHHHHHHHHH-----CCCEEEEecCCCCCCC----CCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEecc----
Confidence 2357788888877 6999999999999742 23577889999999999999999999999988776543
Q ss_pred CCCceEEecC----------------------------------------------------------------------
Q psy5372 360 DPVKIITTDV---------------------------------------------------------------------- 369 (586)
Q Consensus 360 pg~~i~st~~---------------------------------------------------------------------- 369 (586)
..|+++..
T Consensus 203 --~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~ 280 (441)
T 1y9z_A 203 --EAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVE 280 (441)
T ss_dssp --SSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEE
T ss_pred --CCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEe
Confidence 32222211
Q ss_pred -----------------------------------------------------------------------------CCC
Q psy5372 370 -----------------------------------------------------------------------------HNT 372 (586)
Q Consensus 370 -----------------------------------------------------------------------------~~~ 372 (586)
.+.
T Consensus 281 rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~t~~~~~~~ 360 (441)
T 1y9z_A 281 RVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQ 360 (441)
T ss_dssp CCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSEEEEEEEEEE
T ss_pred ccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCCcccccccCC
Confidence 012
Q ss_pred eeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHH
Q psy5372 373 CTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLA 452 (586)
Q Consensus 373 ~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a 452 (586)
.|..++|||||||||||++|||++++|+|++++||++|++||++.+... .+..||+|+||+.+|++.+
T Consensus 361 ~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~~~~ 428 (441)
T 1y9z_A 361 DYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAKAYL 428 (441)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHHHHH
T ss_pred CceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHHHHH
Confidence 3566899999999999999999999999999999999999999875433 2567999999999999999
Q ss_pred hccCCCCC
Q psy5372 453 KNWVNVPA 460 (586)
Q Consensus 453 ~~~~~~~~ 460 (586)
+.+...+.
T Consensus 429 ~~lc~~~~ 436 (441)
T 1y9z_A 429 DESCTGPT 436 (441)
T ss_dssp HHCTTCC-
T ss_pred HhhhcCCC
Confidence 87766553
|
| >4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=413.90 Aligned_cols=283 Identities=17% Similarity=0.146 Sum_probs=191.0
Q ss_pred CchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCC-----------------------------
Q psy5372 146 NIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDI----------------------------- 196 (586)
Q Consensus 146 ~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~----------------------------- 196 (586)
.+.++|+ .+.+|++|+|||||||||++||||++..... ...+..+..++
T Consensus 19 G~~~~w~-~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (357)
T 4h6x_A 19 GLADLHN-QTLGDPQITIVIIDGDPDYTLSCFEGAEVSK-VFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAV 96 (357)
T ss_dssp THHHHHH-HCSCCTTSEEEEEESCCCTTSGGGTTCEEEE-CCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred CHHHHHH-hcCCCCCCEEEEEcCCCCCCChhHcCCCccc-ccccccccccccCcccccccccccCccccccccccccccc
Confidence 4789999 8988999999999999999999998632110 00000000000
Q ss_pred CCCCCC--CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC---------CchhHHHHHHhhhcCCCCeEEEc
Q psy5372 197 TPRYED--PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG---------ETTDLIESKALQFGLDKVDIYSG 265 (586)
Q Consensus 197 ~~~~~~--d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~---------~~~~~~~a~~~~~~~~~~~Vin~ 265 (586)
.|.... |.+||||||||||+|..++ ++.||||+|+|+++|++.. ...+++.+++|+.. ++++||||
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~~~--g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~-~g~~Vin~ 173 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQEHS--PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALE-LGANIIHC 173 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCTTS--SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHH-TTCSEEEE
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccCCC--CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHH-cCCCEEee
Confidence 010000 4568999999999997544 6799999999999998642 14567788999887 89999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCC
Q psy5372 266 SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEE 345 (586)
Q Consensus 266 S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~ 345 (586)
|||...... .....+.++++++.. +|+++|+||||++.. ....|+..+++|+|||++.++.++.|||+
T Consensus 174 S~G~~~~~~---~~~~~~~~ai~~a~~-----~gv~vV~AAGN~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~fSn~ 241 (357)
T 4h6x_A 174 AFCRPTQTS---EGEEILVQAIKKCQD-----NNVLIVSPTGNNSNE----SWCLPAVLPGTLAVGAAKVDGTPCHFSNW 241 (357)
T ss_dssp C--------------CHHHHHHHHHHH-----TTCEEEEECC-------------------CEEEEEECTTSSBCTTCC-
T ss_pred ccccCCccc---cchhHHHHHHHHHhh-----CCeEEEecccCCCCC----cCcCcccCCCCceEEEeccCCcccccccC
Confidence 999753211 122356777777776 699999999999864 23457788999999999999999999999
Q ss_pred CCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCCcCCCCC
Q psy5372 346 CTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALE----ANPNMTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 346 G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~----~~p~lt~~~v~~~L~~tA~~~~~~~ 421 (586)
|+... .+...+||..|+++.+.+++|..++|||||||+|||++|||++ ++|.|+++|||++|+.||++.+...
T Consensus 242 G~~~~---~~di~APG~~i~s~~~~~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~ 318 (357)
T 4h6x_A 242 GGNNT---KEGILAPGEEILGAQPCTEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV 318 (357)
T ss_dssp --CTT---TTEEEEECSSEEECCTTCSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC--------
T ss_pred CCCCC---ccceeecCCCeEeccCCCCcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC
Confidence 96421 1222569999999987788888899999999999999999996 4678999999999999999875432
Q ss_pred CCCccccCCCcccCCcccccccCHHHHHHHHhccCCC
Q psy5372 422 VSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNV 458 (586)
Q Consensus 422 ~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~~~ 458 (586)
...+..||||+||+.+||+++..+..+
T Consensus 319 ----------~~~~~~~G~G~vn~~~A~~~~~~~~~~ 345 (357)
T 4h6x_A 319 ----------VEEPERCLRGFVNIPGAMKVLFGQPSV 345 (357)
T ss_dssp ----------------CTTCBCCHHHHHHHHHSCCCG
T ss_pred ----------CCCcccceeEEecHHHHHHHHhCCCce
Confidence 123567999999999999998765443
|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=452.86 Aligned_cols=361 Identities=17% Similarity=0.174 Sum_probs=48.6
Q ss_pred cccceeeeeEEEEEcCCcch--HHHHH-------HHhCC--eEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCC
Q psy5372 6 ERAEHFLNQWVVHISGDPDI--ANQVA-------QDLGF--HYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDA 74 (586)
Q Consensus 6 ~~~~~~~~~~iV~~~~~~~~--~~~~~-------~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 74 (586)
+....+|++|||+||++... .+.+. ++.|. ++...+. ..+++++++++++.+++|+++|
T Consensus 69 ~~~~~ipg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~----------~~~~Gfsv~l~~~~l~~L~~~P 138 (692)
T 2p4e_P 69 KDPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFH----------GLLPGFLVKMSGDLLELALKLP 138 (692)
T ss_dssp SGGGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC----------SSSCEEEEECCGGGHHHHHTST
T ss_pred cccccCCCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEee----------ccccEEEEEeCHHHHHHHHcCC
Confidence 34578999999999987532 22222 22222 2222222 2345566777889999999999
Q ss_pred ceeEEeecchhhccccchhhHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcC
Q psy5372 75 RVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQEL 154 (586)
Q Consensus 75 ~V~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~ 154 (586)
.|++|||+..+... ..+|+|.++.+.. ....+|. .
T Consensus 139 ~V~~Vepd~~v~~~-------------------------------------~~pWgL~~i~~~~-------~~~~~w~-~ 173 (692)
T 2p4e_P 139 HVDYIEEDSSVFAQ-------------------------------------SIPWNLERITPPR-------YRADEYQ-P 173 (692)
T ss_dssp TEEEEEEEEEEEEC------------------------------------------------------------------
T ss_pred CceEEEeccccccC-------------------------------------CCCcchhhccccc-------ccccccc-c
Confidence 99999999987432 1259998776421 1224788 7
Q ss_pred CCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCC-CCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcE
Q psy5372 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAE-KWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGAR 233 (586)
Q Consensus 155 ~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~ 233 (586)
+++|+||+|+|||||||++||||.+++.. ..|++... +...+.....|.+||||||||||+|.. .||||+|+
T Consensus 174 ~~~G~GV~VaVIDTGId~~HpdL~gr~~~-~~~~~~~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~------~GVAP~A~ 246 (692)
T 2p4e_P 174 PDGGSLVEVYLLDTSIQSDHREIEGRVMV-TDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD------AGVAKGAS 246 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCcEEEEEcCCCCCCChhhcCceEe-cccccccCCCCCcccCCCCCCCCcHHHhhhHhhcCC------CccCCCCE
Confidence 89999999999999999999999997642 23443321 111111111178999999999999873 89999999
Q ss_pred EEEEEccCC----CchhHHHHHHhhhcC-----CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEE
Q psy5372 234 VGGVKLLDG----ETTDLIESKALQFGL-----DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304 (586)
Q Consensus 234 l~~~~v~~~----~~~~~~~a~~~~~~~-----~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~ 304 (586)
|+++|+++. ..++++++++|+... .+++|||||||... ...+.++++++.. +|++||+
T Consensus 247 L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~--------s~~l~~Ai~~A~~-----~GVlvVa 313 (692)
T 2p4e_P 247 MRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY--------SRVLNAACQRLAR-----AGVVLVT 313 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC--------cHHHHHHHHHHHH-----CCCEEEE
Confidence 999999863 478889999998763 38999999999642 2245667777665 7999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCC----CCCCCCcceeccccCCCCCCCceEEecCCC-CeeeccCC
Q psy5372 305 AAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPF----YSEECTGLIATAYSGGISDPVKIITTDVHN-TCTCEHSG 379 (586)
Q Consensus 305 AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~----~S~~G~~~~~~~~~~~~apg~~i~st~~~~-~~~~~~~G 379 (586)
||||+|.+. + ...|+..+++|+|||++.++.++. ||++|+..++ .+||.+|+++...+ ..|..++|
T Consensus 314 AAGN~G~~~--~-~~sPA~~~~vItVGA~d~~~~~a~~ss~fSn~G~~vDI------~APG~~I~St~~~~~~~y~~~SG 384 (692)
T 2p4e_P 314 AAGNFRDDA--C-LYSPASAPEVITVGATNAQDQPVTLGTLGTNFGRCVDL------FAPGEDIIGASSDCSTCFVSQSG 384 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCCCCC--C-ccCcccCCCEEEEEEEcCCCCccccccccCCCCCceeE------EecCCcEEeeccCCCCceEeccc
Confidence 999998742 2 235778899999999999999888 8999987666 56999999987553 56889999
Q ss_pred CCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCC--C----CccccCCCc--ccCCcccccc--cCHHHHH
Q psy5372 380 TSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV--S----GWERNARDL--WFHSAYGFGL--INTFKLV 449 (586)
Q Consensus 380 TS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~--~----~w~~n~~g~--~~~~~~G~G~--vna~~Av 449 (586)
||||||||||++|||++++|+|+++|||++|+.+|.+...... + ....|.-.. .+....|+|+ .|+..+.
T Consensus 385 TSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~ 464 (692)
T 2p4e_P 385 TSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAH 464 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCCCCccccCCCCcceeecCCCccccCCCCcccccccccc
Confidence 9999999999999999999999999999999999987543220 0 011121110 1234568888 7776665
Q ss_pred H
Q psy5372 450 S 450 (586)
Q Consensus 450 ~ 450 (586)
.
T Consensus 465 s 465 (692)
T 2p4e_P 465 S 465 (692)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=396.37 Aligned_cols=267 Identities=18% Similarity=0.131 Sum_probs=209.2
Q ss_pred CCCC-CCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcE
Q psy5372 155 NING-AGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGAR 233 (586)
Q Consensus 155 ~~~G-~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~ 233 (586)
.++| +||+|||||||||++||||+++... .+++......+.+ .+.++|||||||||+|..++ ++.||||+|+
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~~~--~~~~~~~~~~~~d---~~~~gHGT~VAGiiag~~~~--~~~GvAp~a~ 75 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGADLT--VLPTLAPTAARSD---GFMSAHGTHVASIIFGQPET--SVPGIAPQCR 75 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCEEE--ECCCSSCCCCCTT---CHHHHHHHHHHHHHHCCTTS--SSCCSSTTSE
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCeee--cCcCCCCCCCCCC---CCCCCcccceeehhhccCCc--eeeeeccccc
Confidence 4678 6999999999999999999886433 2333333222211 14568999999999998655 5799999999
Q ss_pred EEEEEccCC-----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCC
Q psy5372 234 VGGVKLLDG-----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGN 308 (586)
Q Consensus 234 l~~~~v~~~-----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN 308 (586)
|+.+|+++. ....++++++|+.. ++++|||||||..... ......+.++++++.. +|+++|+||||
T Consensus 76 l~~~kv~~~~~~~~~~~~i~~ai~~a~~-~~~~Vin~S~G~~~~~---~~~~~~~~~ai~~a~~-----~gi~vV~AaGN 146 (282)
T 3zxy_A 76 GLIVPIFSDDRRRITQLDLARGIERAVN-AGAHIINISGGELTDF---GEADGWLENAVSLCRQ-----NNVLLVAAAGN 146 (282)
T ss_dssp EEEEECSCSSSSCCCHHHHHHHHHHHHH-TTCSEEEECCCEEESS---SCCCHHHHHHHHHHHH-----TTCEEEEECCS
T ss_pred eEeeEeeccccccchHHHHHHHHHHhhc-cCCeEEeccCcccccc---ccccHHHHHHHHHHhh-----cCceEEEeccc
Confidence 999999843 25678899999988 8899999999964322 2233467788888877 69999999999
Q ss_pred CCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHH
Q psy5372 309 GKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAA 388 (586)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VA 388 (586)
++.. ....|+..+++|+|||++.++.++.||++|+... .++..+||..|+++. +++.|..++|||||||+||
T Consensus 147 ~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~~~~~~---~~di~ApG~~i~s~~-~~~~~~~~sGTS~AaP~va 218 (282)
T 3zxy_A 147 NGCD----CLHVPAALPAVLAVGAMDDHGHPLDFSNWGSTYE---QQGILAPGEDILGAK-PGGGTERLSGTAFATPIVS 218 (282)
T ss_dssp SCSS----CEEETTTSTTCEEEEEECTTSCBCSSSCCCHHHH---HHEEEEECSSEEEEC-TTSCEEEECSHHHHHHHHH
T ss_pred CCCc----cccCccccceeEEEEEEcCCCccccccCCCCCcc---ccceeccCcceeeec-CCCceeecCCCcccchHHH
Confidence 9874 2345778899999999999999999999997531 111246899999996 5567889999999999999
Q ss_pred HHHHHHHhh----CCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhcc
Q psy5372 389 GVLALALEA----NPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455 (586)
Q Consensus 389 G~aALl~~~----~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~ 455 (586)
|++|||+++ +|.++++|||++|+.||++.+... + .++..||||+||+.+||++++.-
T Consensus 219 G~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~-~---------~~~~~~G~G~ln~~~A~~~~~~g 279 (282)
T 3zxy_A 219 GVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDA-P---------EQARRCLAGRLNVSGAFTLLKGG 279 (282)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCC-C---------CccCceeeeEeCHHHHHHHHhCc
Confidence 999999987 588999999999999999875433 1 23567999999999999998753
|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=394.14 Aligned_cols=253 Identities=23% Similarity=0.284 Sum_probs=217.0
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
+.||+|+++++ .++++..+|+ .+++|+||+||||||||+.+||+|.+++.. +++|.+.+.++. |..
T Consensus 3 ~~~W~l~~i~~------~~~~~~~aw~-~~~~G~gv~VaViDtGvd~~h~~l~~~~~~--~~~~~~~~~~~~-----d~~ 68 (284)
T 1sh7_A 3 NAIWGLDRIDQ------RNLPLDRNYN-ANFDGFGVTAYVIDTGVNNNHEEFGGRSVS--GYDFVDNDADSS-----DCN 68 (284)
T ss_dssp SCCHHHHHHTC------SSSSCCSBCC-CSCCCTTCEEEEEESCCCTTCTTTTTCEEE--EEETTTTBSCCC-----CSS
T ss_pred CCCcChhhcCC------cccCchhhhh-cCCCCCCCEEEEEcCCCCCCChhHcCCccc--cccccCCCCCCC-----CCC
Confidence 35899999886 4577889999 899999999999999999999999987643 678877654433 789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcC-CCCeEEEcCCCCCCCCCCCCCch
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGL-DKVDIYSGSWGPPDDGKSMDGPG 280 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~-~~~~Vin~S~G~~~~~~~~~~~~ 280 (586)
+|||||||||++.. .||||+|+|+.+|+++. ..++++++++|+... .+++|||||||... .
T Consensus 69 gHGT~vAgiia~~~------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~--------~ 134 (284)
T 1sh7_A 69 GHGTHVAGTIGGSQ------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ--------S 134 (284)
T ss_dssp SHHHHHHHHHHCTT------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC--------C
T ss_pred CcHHHHHHHHhccc------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC--------C
Confidence 99999999999873 79999999999999974 367899999998864 47999999999852 2
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCC
Q psy5372 281 KLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD 360 (586)
Q Consensus 281 ~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~ap 360 (586)
..+.++++++.+ +|++||+||||++... + ...|+..+++|+|||++..+.++.||++|+.+++. +|
T Consensus 135 ~~~~~ai~~a~~-----~gi~vV~AAGN~g~~~--~-~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~------Ap 200 (284)
T 1sh7_A 135 TALDSAVQGAIQ-----SGVSFMLAAGNSNADA--C-NTSPARVPSGVTVGSTTSSDSRSSFSNWGSCVDLF------AP 200 (284)
T ss_dssp HHHHHHHHHHHH-----TTCEEEEECCSSSSBG--G-GSBTTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE------EE
T ss_pred HHHHHHHHHHHH-----CCCEEEEECCcCCCCC--C-ccccccCCCeEEEEEecCCCCcCcccCCCCccEEE------ec
Confidence 467888888876 6999999999998742 1 24567889999999999999999999999988774 48
Q ss_pred CCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCC
Q psy5372 361 PVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 361 g~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 421 (586)
|..|+++. .++.|..++|||||||+|||++|||++++|+|+++|||++|+.||++....+
T Consensus 201 G~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 260 (284)
T 1sh7_A 201 GSQIKSAW-YDGGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVSD 260 (284)
T ss_dssp CSSEEEEC-TTSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCBC
T ss_pred cCCeEEec-CCCCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCccC
Confidence 89999985 4557899999999999999999999999999999999999999999876554
|
| >4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=399.56 Aligned_cols=277 Identities=16% Similarity=0.128 Sum_probs=217.0
Q ss_pred CchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcc
Q psy5372 146 NIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCG 225 (586)
Q Consensus 146 ~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~ 225 (586)
.++++|+ .+.+++||+|||||||||++||||.++.... ..++..++.++. .|.++|||||||||+|..++ ++
T Consensus 9 G~~~aW~-~~~G~~gV~VaViDtGid~~Hpdl~g~~~~~-~~~~~~~~~~~~----~d~~gHGThVAGiiag~~~~--~~ 80 (306)
T 4h6w_A 9 GLKKLWS-ETRGDPKICVAVLDGIVDQNHPCFIGADLTR-LPSLVSGEANAN----GSMSTHGTHVASIIFGQHDS--PV 80 (306)
T ss_dssp THHHHHH-HCSCCTTCEEEEESSCCCTTSGGGTTCEEEE-CC--------------CCCCHHHHHHHHHHHCCTTS--SS
T ss_pred CHHHHHh-hhCCCCCCEEEEEcCCCCCCChhHcCCcccC-CCcccCCCCCCC----CCCCCchHHHHHHHHccccC--Cc
Confidence 5789999 8777789999999999999999998764321 223333332221 16789999999999997544 67
Q ss_pred eeeecCcEEEEEEccCC-----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCc
Q psy5372 226 VGVCYGARVGGVKLLDG-----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGV 300 (586)
Q Consensus 226 ~GVAp~a~l~~~~v~~~-----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi 300 (586)
.||||+|+|+++|++.. ....++++++|+.. ++++|||+|||..... ......+.++++++.. +|+
T Consensus 81 ~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~-~g~~vi~~s~g~~~~~---~~~~~~~~~ai~~a~~-----~gi 151 (306)
T 4h6w_A 81 TGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVN-NGANIINVSAGQLTDA---GEADTWLEKAIQLCQE-----NNV 151 (306)
T ss_dssp CCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHH-TTCSEEEECCCEEESS---SCCCHHHHHHHHHHHH-----TTC
T ss_pred ceeccccccceeeccccccccchHHHHHHHHHHhhc-ccceeeeccccccccC---CCccHHHHHHHHHHHH-----cCC
Confidence 99999999999999843 25678899999988 8999999999964321 1233467788888877 699
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccCCC
Q psy5372 301 LFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380 (586)
Q Consensus 301 ~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GT 380 (586)
++|+|+||++.. ....|+..+++|+|||++..+.++.||++|+... .++..+||..|+++. +++.|..++||
T Consensus 152 ~vvaaagn~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~---~~di~APG~~i~s~~-~~~~~~~~sGT 223 (306)
T 4h6w_A 152 LLIAATGNDGCE----CLHVPASLPTVLAVGAMDDQGKPVDFSNWGDAYQ---KQGILAPGKDILGAK-PNGGTIRLSGT 223 (306)
T ss_dssp EEEEECCSSSSB----CEEETTTSTTCEEEEEECTTSCBCSSSCBCHHHH---HHEEEEECSSEEEEC-TTSCEEEECSH
T ss_pred eEEEecCCCCcc----cccccccCCcceEEEEecCCCCccccccccCCcC---cceeecCCcCccccc-CCCceeccCCC
Confidence 999999999874 2345778899999999999999999999995431 112256899999996 56678999999
Q ss_pred CchHHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhccC
Q psy5372 381 SAAAPIAAGVLALALEA----NPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 381 S~AaP~VAG~aALl~~~----~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~ 456 (586)
|||||+|||++|||+++ +|.|+++|||++|+.||++++..+ ..++..||||+||+.+||+.+..+.
T Consensus 224 S~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~G~G~ln~~~Av~~~~~~~ 293 (306)
T 4h6w_A 224 SFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRCLMGKLNILDAIEHLTGET 293 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGGTTCBCCHHHHHHHHSSCC
T ss_pred cchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCcceeecCHHHHHHHHHCCC
Confidence 99999999999999964 699999999999999999876543 1234578999999999999887654
Q ss_pred C
Q psy5372 457 N 457 (586)
Q Consensus 457 ~ 457 (586)
.
T Consensus 294 ~ 294 (306)
T 4h6w_A 294 M 294 (306)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=393.19 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=216.1
Q ss_pred CCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCC
Q psy5372 125 WPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR 204 (586)
Q Consensus 125 ~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~ 204 (586)
++.||+|+++++ .++++..+|+ .+++|+||+|+|||+||+.+||+|.+++.. +++|.+++.++. |.
T Consensus 4 ~~~~W~l~~i~~------~~~~~~~~~~-~~~~G~gv~VaViDtGid~~Hpdl~~~~~~--~~d~~~~~~~~~-----d~ 69 (278)
T 2b6n_A 4 PSPTWGIDRIDQ------RNLPLDNNYH-TDYDGSGVTAFVIDTGVLNTHNEFGGRASS--GYDFIDNDYDAT-----DC 69 (278)
T ss_dssp ESCCHHHHHHTC------SSSSCCSEEE-CSCCCTTCEEEEEESCCCTTCGGGTTCEEE--EEETTTTBSCCC-----CS
T ss_pred CCCCCCccccCC------ccCCcchhcc-cCCCCCCCEEEEEeCCCCCCChhHhccccc--CeecCCCCCCCC-----CC
Confidence 346899999886 5678889999 999999999999999999999999987643 678877655443 78
Q ss_pred CChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcC-CCCeEEEcCCCCCCCCCCCCCc
Q psy5372 205 NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGL-DKVDIYSGSWGPPDDGKSMDGP 279 (586)
Q Consensus 205 ~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~-~~~~Vin~S~G~~~~~~~~~~~ 279 (586)
.+|||||||||++. ..||||+|+|+.+|+++. ..++++++++|+... .+++|||||||...
T Consensus 70 ~gHGT~vAgiia~~------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~-------- 135 (278)
T 2b6n_A 70 NGHGTHVAGTIGGS------TYGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA-------- 135 (278)
T ss_dssp SSHHHHHHHHHHCT------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--------
T ss_pred CCcHHHHHHHHHCC------CcCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc--------
Confidence 99999999999986 379999999999999874 367889999998863 58999999999753
Q ss_pred hHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCC
Q psy5372 280 GKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 280 ~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
...+.++++++.. +|+++|+||||++... + ...|+..+++|+|||++..+.++.||++|+..++. +
T Consensus 136 ~~~~~~ai~~a~~-----~gi~vV~AAGN~g~~~--~-~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~------A 201 (278)
T 2b6n_A 136 SQATDDAVNAAVA-----AGITFVVAAGNDNSNA--C-NYSPARAADAITVGSTTSNDSRSSFSNYGTCLDIY------A 201 (278)
T ss_dssp CHHHHHHHHHHHH-----TTCEEEEECCSSSSBG--G-GEETTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE------E
T ss_pred CHHHHHHHHHHHH-----CCCEEEEEeCCCCCCC--C-CcCcccCCCeEEEEeeCCCCCcCCcCCCCCCCeEE------e
Confidence 2467888888876 6999999999998742 2 23467889999999999999999999999987774 4
Q ss_pred CCCceEEecCC-CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCC
Q psy5372 360 DPVKIITTDVH-NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419 (586)
Q Consensus 360 pg~~i~st~~~-~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 419 (586)
||..|+++... +..|..++|||||||+|||++|||++++|+|+++|||++|+.||++...
T Consensus 202 pG~~i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 262 (278)
T 2b6n_A 202 PGSSITSSWYTSNSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKV 262 (278)
T ss_dssp ECSSEEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred CCCCeECcccCCCCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCc
Confidence 88899988643 3678899999999999999999999999999999999999999987644
|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=387.39 Aligned_cols=252 Identities=24% Similarity=0.286 Sum_probs=214.8
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
+.||+|+++.+ .++++..+|+ .+++|+||+|||||+||+.+||+|.+++.. ++++...+.. |..
T Consensus 5 ~~~W~l~~i~~------~~~~~~~a~~-~~~~G~gv~VaViDtGvd~~h~~l~~~~~~--~~~~~~~~~~-------d~~ 68 (276)
T 4dzt_A 5 PAPWGLDRIDQ------RDLPLSNSYT-YTATGRGVNVYVIDTGIRTTHREFGGRARV--GYDALGGNGQ-------DCN 68 (276)
T ss_dssp SCCHHHHHHTS------SSSSCCSCEE-CSCCCTTCEEEEEESCCCTTCGGGTTCEEE--EEETTSSCSC-------CSS
T ss_pred CCCCChhhcCC------ccCCccccee-cCCCCCCcEEEEEccCCCCCChhHccCeec--cccCCCCCCC-------CCC
Confidence 45899999885 5789999999 899999999999999999999999987643 4666653222 789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcC-CCCeEEEcCCCCCCCCCCCCCch
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGL-DKVDIYSGSWGPPDDGKSMDGPG 280 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~-~~~~Vin~S~G~~~~~~~~~~~~ 280 (586)
+|||||||+|++.. .||||+|+|+.+|+++. ....++++++|+... .+++|||||||... .
T Consensus 69 gHGT~vAgiiag~~------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~--------~ 134 (276)
T 4dzt_A 69 GHGTHVAGTIGGVT------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV--------S 134 (276)
T ss_dssp SHHHHHHHHHHCTT------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--------C
T ss_pred CCHHHHHHHHHccc------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC--------C
Confidence 99999999999873 79999999999999873 477889999998874 48999999999743 2
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCC
Q psy5372 281 KLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD 360 (586)
Q Consensus 281 ~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~ap 360 (586)
..+.++++++.+ +|+++|+||||++... + ...|+..+++|+|||++.++.++.||++|+..++. +|
T Consensus 135 ~~~~~a~~~a~~-----~gvlvv~AAGN~g~~~--~-~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~dv~------Ap 200 (276)
T 4dzt_A 135 TALDNAVKNSIA-----AGVVYAVAAGNDNANA--C-NYSPARVAEALTVGATTSSDARASFSNYGSCVDLF------AP 200 (276)
T ss_dssp HHHHHHHHHHHH-----TTCEEEEECCSSSSBG--G-GEETTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE------EE
T ss_pred HHHHHHHHHHHh-----CCCEEEEECCCCCCCC--C-CcCcccCCCEEEEEEECCCCCcCCcCCCCCCceEE------eC
Confidence 467888888877 6999999999998742 1 22467889999999999999999999999988774 48
Q ss_pred CCceEEecCC-CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCC
Q psy5372 361 PVKIITTDVH-NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 361 g~~i~st~~~-~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 421 (586)
|..|+++... ..+|..++|||||||+|||++|||++++|+|+++|||++|++||++....+
T Consensus 201 G~~i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 262 (276)
T 4dzt_A 201 GASIPSAWYTSDTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLSG 262 (276)
T ss_dssp CSSEEEECTTSSSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCBS
T ss_pred CCCeEccccCCCCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccCC
Confidence 8999988644 347889999999999999999999999999999999999999999876544
|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=376.07 Aligned_cols=246 Identities=22% Similarity=0.241 Sum_probs=204.0
Q ss_pred CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCC
Q psy5372 126 PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRN 205 (586)
Q Consensus 126 ~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 205 (586)
..||+|+++.+.. ..+...+|+ ..+|+||+|+|||+|||.+||+|.+++.. +++|.+ + +. |..
T Consensus 5 ~~~W~l~~i~~~~-----~~~~~~~~~--~~~G~gv~VaViDsGvd~~H~~l~~~~~~--~~~~~~-~--~~-----d~~ 67 (279)
T 2pwa_A 5 NAPWGLARISSTS-----PGTSTYYYD--ESAGQGSCVYVIDTGIEASHPEFEGRAQM--VKTYYY-S--SR-----DGN 67 (279)
T ss_dssp TCCHHHHHHTCSS-----TTCCCEECC--TTTTTTEEEEEEESCCCTTCGGGTTCEEE--EEESSS-C--SS-----CSS
T ss_pred CCCcChhhcCCCC-----ccccccccc--CCCCCCCEEEEEeCCCCCCChhHhCcccc--ccCCCC-C--CC-----CCC
Confidence 4589998877532 122334666 47999999999999999999999987653 566662 1 11 789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCC-------eEEEcCCCCCCCCC
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKV-------DIYSGSWGPPDDGK 274 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~-------~Vin~S~G~~~~~~ 274 (586)
+|||||||||++. ..||||+|+|+.+|+++. ..++++++++|+.. +++ +|||||||...
T Consensus 68 gHGT~vAgiia~~------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~-~~~~~~~~~~~Vin~S~G~~~--- 137 (279)
T 2pwa_A 68 GHGTHCAGTVGSR------TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVAS-DKNNRNCPKGVVASLSLGGGY--- 137 (279)
T ss_dssp SHHHHHHHHHHCT------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH-HGGGSCCTTEEEEEECCCEEC---
T ss_pred CCHHHHHHHHHhc------ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHh-cCccccCCCccEEEecCCCCC---
Confidence 9999999999987 379999999999999864 46788999999886 444 99999999642
Q ss_pred CCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccc
Q psy5372 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAY 354 (586)
Q Consensus 275 ~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~ 354 (586)
...+.++++++.. +|++||+||||++.... ...|+..+++|+|||++.++.++.||++|+..++.
T Consensus 138 -----~~~~~~ai~~a~~-----~gi~vV~AAGN~g~~~~---~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~-- 202 (279)
T 2pwa_A 138 -----SSSVNSAAARLQS-----SGVMVAVAAGNNNADAR---NYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIF-- 202 (279)
T ss_dssp -----CHHHHHHHHHHHH-----TTEEEEEECCSSSSBGG---GEETTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE--
T ss_pred -----CHHHHHHHHHHHH-----CCCEEEEECCCCCCcCC---CcCcccCCcEEEEEEecCCCCcCCcCCCCCcceEE--
Confidence 2467888888876 69999999999997421 23567889999999999999999999999987774
Q ss_pred cCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCC
Q psy5372 355 SGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419 (586)
Q Consensus 355 ~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 419 (586)
+||..|+++.. ++.|..++|||||||+|||++|||+++ |.|+++|||++|+.||++...
T Consensus 203 ----APG~~i~s~~~-~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~ 261 (279)
T 2pwa_A 203 ----GPGTDILSTWI-GGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL 261 (279)
T ss_dssp ----EECSSEEEEET-TTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC
T ss_pred ----EecCCeEEeec-CCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc
Confidence 58899999864 557899999999999999999999999 999999999999999998753
|
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=409.92 Aligned_cols=293 Identities=20% Similarity=0.129 Sum_probs=217.8
Q ss_pred hHHHHcCCCCCCCcEEEEEecCccCCCcccccC--------CCC-----------------CCcccccCCC----CCCCC
Q psy5372 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS--------FAP-----------------ELSYNFNAEK----WDITP 198 (586)
Q Consensus 148 ~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------~~~-----------------~~~~~~~~~~----~~~~~ 198 (586)
..+|+ .+++|+||+||||||||+.+||+|.+. +.. ...++|..+. .+...
T Consensus 14 ~~~w~-~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~~~~~~~~~~~~~ 92 (649)
T 3i6s_A 14 SGLWP-ASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNI 92 (649)
T ss_dssp SSHHH-HHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECCHHHHHHCTTCCC
T ss_pred hhhHh-ccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEeccCccccccccccc
Confidence 46999 899999999999999999999999872 000 0011222100 00000
Q ss_pred C-CCC-CCCChHHHHHHHHhccCCCCCc--------ceeeecCcEEEEEEccCC---CchhHHHHHHhhhcCCCCeEEEc
Q psy5372 199 R-YED-PRNKHGTRCAGELVMKPNNSKC--------GVGVCYGARVGGVKLLDG---ETTDLIESKALQFGLDKVDIYSG 265 (586)
Q Consensus 199 ~-~~~-d~~~HGT~vAgiia~~~~n~~g--------~~GVAp~a~l~~~~v~~~---~~~~~~~a~~~~~~~~~~~Vin~ 265 (586)
. ..+ |..||||||||||||..+++.+ +.||||+|+|+++|+++. ..+++++|++++++ ++++||||
T Consensus 93 ~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~A~~-~gvdVIn~ 171 (649)
T 3i6s_A 93 TMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVA-DGVDMISI 171 (649)
T ss_dssp TTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHHHHH-TTCSEEEE
T ss_pred CCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHHHHH-cCCCEEEe
Confidence 0 111 7899999999999998644332 479999999999999863 47889999999998 89999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecC----------
Q psy5372 266 SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARE---------- 335 (586)
Q Consensus 266 S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~---------- 335 (586)
|||..... .....+..++.++.+ +|+++|+||||+|.... ..+...|++|+|||++.
T Consensus 172 SlG~~~~~----~~~~~i~~a~~~A~~-----~Gi~vV~AAGN~G~~~~----t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 172 SYGYRFIP----LYEDAISIASFGAMM-----KGVLVSASAGNRGPGIG----SLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp CCCCCSCC----GGGCHHHHHHHHHHH-----TTCEEEEECCSCTTSTT----CCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred CCccCCcc----cchhHHHHHHHHHHh-----CCcEEEEeCCCCCCCCC----ccCCCCCceEEEeeeecccceeeEEEe
Confidence 99985321 122345666667776 79999999999998532 23446789999998321
Q ss_pred --------------------------------------------------------------------------------
Q psy5372 336 -------------------------------------------------------------------------------- 335 (586)
Q Consensus 336 -------------------------------------------------------------------------------- 335 (586)
T Consensus 239 gng~~~~g~sl~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~ 318 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPG 318 (649)
T ss_dssp TTSCEEEEECCCSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGG
T ss_pred CCCcEEeeeecccCcccCcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCcc
Confidence
Q ss_pred -----------------------------------------------CCCCCCCCCCCCcce--eccccCCCCCCCceEE
Q psy5372 336 -----------------------------------------------DGQSPFYSEECTGLI--ATAYSGGISDPVKIIT 366 (586)
Q Consensus 336 -----------------------------------------------~~~~a~~S~~G~~~~--~~~~~~~~apg~~i~s 366 (586)
.+.++.||++||... ...+|+..+||.+|++
T Consensus 319 ~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ils 398 (649)
T 3i6s_A 319 VFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILA 398 (649)
T ss_dssp GGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEE
T ss_pred ccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEe
Confidence 233478999999874 3456677889999999
Q ss_pred ecCCC-------------CeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCC-c
Q psy5372 367 TDVHN-------------TCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARD-L 432 (586)
Q Consensus 367 t~~~~-------------~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g-~ 432 (586)
+.... ..|..++|||||||||||++|||++++|+|+|++||.+|+.||.+.+....+ +.....+ .
T Consensus 399 a~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~-i~~~~~~~~ 477 (649)
T 3i6s_A 399 AYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKP-IKDSDNNKA 477 (649)
T ss_dssp ECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSB-CEETTTSSB
T ss_pred ecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCc-ccccccCCc
Confidence 97542 5689999999999999999999999999999999999999999998765422 2211111 2
Q ss_pred ccCCcccccccCHHHHHHHHhccC
Q psy5372 433 WFHSAYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 433 ~~~~~~G~G~vna~~Av~~a~~~~ 456 (586)
.....||+|+||+.+|++...-+.
T Consensus 478 a~~~~~GaG~vn~~~A~~pGLvyd 501 (649)
T 3i6s_A 478 ATPLDMGAGHVDPNRALDPGLVYD 501 (649)
T ss_dssp CCHHHHTTCBCCHHHHTCCSEECC
T ss_pred CCcCCCCeeeeCHHHhcCcccccc
Confidence 234579999999999997554443
|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=418.22 Aligned_cols=286 Identities=18% Similarity=0.157 Sum_probs=222.1
Q ss_pred CCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCC-----------------------------CcccccCCC
Q psy5372 143 LDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE-----------------------------LSYNFNAEK 193 (586)
Q Consensus 143 ~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~-----------------------------~~~~~~~~~ 193 (586)
..|+++.+|+ .+++|+||+|||||||||++||+|....... ..++|.++.
T Consensus 2 d~i~~~~~w~-~~~~G~GV~VaVIDTGId~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 2 DPSQVKTLQE-KAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp CTTCCHHHHH-HHCSCTTCEEEEEESCCTTCCCCCSCCSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred CccccHHHHh-ccCCCCCcEEEEEecCCCCCCHhHcCCCCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 3578999999 8999999999999999999999998532211 112333222
Q ss_pred CCCCCCCCCCCCChHHHHHHHHhccC----CCCCcceeeecCcEEEEEEccCCC-----chhHHHHHHhhhcCCCCeEEE
Q psy5372 194 WDITPRYEDPRNKHGTRCAGELVMKP----NNSKCGVGVCYGARVGGVKLLDGE-----TTDLIESKALQFGLDKVDIYS 264 (586)
Q Consensus 194 ~~~~~~~~~d~~~HGT~vAgiia~~~----~n~~g~~GVAp~a~l~~~~v~~~~-----~~~~~~a~~~~~~~~~~~Vin 264 (586)
.. +|..||||||||||||.. +++.++.||||+|+|+++|+++.. ..+++.|+++++. ++++|||
T Consensus 81 ~~------~D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~-~gvdVIn 153 (926)
T 1xf1_A 81 KT------AVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAIN-LGAKVIN 153 (926)
T ss_dssp CC------CCSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHH-TTCEEEE
T ss_pred CC------CCCCCcHHHHHHHHhCCCccCcccCCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHH-hCCcEEE
Confidence 11 178999999999999975 345678999999999999999753 3578899999998 8999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCC-----------CCCCCCCCCCceEEEEeee
Q psy5372 265 GSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGD-----------NCAADGYINSIYTIAIASA 333 (586)
Q Consensus 265 ~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~-----------~~~~~~~~~~~~vi~Vga~ 333 (586)
||||..... .......+..++.++.. +|++||+||||+|..+. ......|+.++++|+|||+
T Consensus 154 ~SlG~~~~~--~~~~~~~~~~ai~~A~~-----~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~ 226 (926)
T 1xf1_A 154 MSFGNAALA--YANLPDETKKAFDYAKS-----KGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASY 226 (926)
T ss_dssp ECCSSCCCT--TCCCCHHHHHHHHHHHH-----TTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEE
T ss_pred ECCCCCCCC--ccccccHHHHHHHHHHh-----CCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecc
Confidence 999975321 12223456778877776 69999999999996321 1223556678999999997
Q ss_pred cCC-----------------------------------------------------------------------------
Q psy5372 334 RED----------------------------------------------------------------------------- 336 (586)
Q Consensus 334 ~~~----------------------------------------------------------------------------- 336 (586)
+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~ 306 (926)
T 1xf1_A 227 SPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAV 306 (926)
T ss_dssp BCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCS
T ss_pred ccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCCCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCc
Confidence 521
Q ss_pred ---------------------------------------------------------CCCCCCCCCCCcceeccccCCCC
Q psy5372 337 ---------------------------------------------------------GQSPFYSEECTGLIATAYSGGIS 359 (586)
Q Consensus 337 ---------------------------------------------------------~~~a~~S~~G~~~~~~~~~~~~a 359 (586)
+.++.||++||......+++..+
T Consensus 307 gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~~~~lKPDI~A 386 (926)
T 1xf1_A 307 GVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKDNPQKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPDIAA 386 (926)
T ss_dssp EEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHHCSSCEEEECSSCEEEECSSCSBCCTTSCCCBCTTSCBSCCEEE
T ss_pred EEEEEecCCCCcccccCccccccEEEEeHHHHHHHHhCCceEEEecccceecccCCcceeccccCCCCCCCCccCceEEC
Confidence 14567999999876667788889
Q ss_pred CCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHh----hCCCCCHHH----HHHHHHhcCCcCCCCCCCCccccCCC
Q psy5372 360 DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALE----ANPNMTWRD----CQHILAWTSEREPLSHVSGWERNARD 431 (586)
Q Consensus 360 pg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~----~~p~lt~~~----v~~~L~~tA~~~~~~~~~~w~~n~~g 431 (586)
||.+|+++. .++.|..++|||||||||||++|||+| .+|.|+++| ||.+|+.||++....+ ...
T Consensus 387 PG~~I~sa~-~~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~ 458 (926)
T 1xf1_A 387 PGQDILSSV-ANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKA 458 (926)
T ss_dssp ECCCEEESS-SCSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTE
T ss_pred CCCCEEeec-cCCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCc
Confidence 999999996 456789999999999999999999965 599999998 9999999999874321 001
Q ss_pred cccCCcccccccCHHHHHHH
Q psy5372 432 LWFHSAYGFGLINTFKLVSL 451 (586)
Q Consensus 432 ~~~~~~~G~G~vna~~Av~~ 451 (586)
......+|+|+||+.+|++.
T Consensus 459 ~~~~~~~G~G~vn~~~A~~~ 478 (926)
T 1xf1_A 459 YFSPRQQGAGAVDAKKASAA 478 (926)
T ss_dssp ECCHHHHTTCBCCHHHHHHC
T ss_pred cCChhccCCCccCHHHhcCC
Confidence 11245789999999999975
|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=387.78 Aligned_cols=256 Identities=20% Similarity=0.223 Sum_probs=199.4
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCC-CCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAE-KWDITPRYEDPRN 205 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~-~~~~~~~~~~d~~ 205 (586)
.||+|+++.+.. . ...+|. .+++|+||+|+||||||+.+||||.+++.. ..|++... +..+++....|..
T Consensus 2 ~~WgL~rI~~~~------~-~~~aw~-~~~tG~GV~VaVIDTGId~~HpdL~gr~~~-~~~~~v~~~dg~~f~~~~~D~~ 72 (546)
T 2qtw_B 2 IPWNLERITPPR------Y-RADEYQ-PPDGGSLVEVYLLDTSIQSDHREIEGRVMV-TDFENVPEEDGTRFHRQASKCD 72 (546)
T ss_dssp CCHHHHHTSCSS------C-C---------CCTTSEEEEEESCCCTTSTTTTTTEEE-EEEECCCCCC-------CTTTT
T ss_pred CCCChhhcCCCc------c-cchhcc-cCCCCCCcEEEEECCCCCCCChHHcccccc-cCcccccCCCCccccCCCCCCC
Confidence 479999888632 1 124898 899999999999999999999999987542 13333321 1111111112789
Q ss_pred ChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcC-----CCCeEEEcCCCCCCCCCCC
Q psy5372 206 KHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGL-----DKVDIYSGSWGPPDDGKSM 276 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~-----~~~~Vin~S~G~~~~~~~~ 276 (586)
+|||||||||+|.. .||||+|+|+++|+++. ..++++++++|+... .+++|||||||...
T Consensus 73 GHGThVAGIIag~~------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~~----- 141 (546)
T 2qtw_B 73 SHGTHLAGVVSGRD------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----- 141 (546)
T ss_dssp HHHHHHHHHHHCTT------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEEC-----
T ss_pred ChHHHHHHHHhccC------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCCC-----
Confidence 99999999999973 79999999999999974 367889999998763 58999999999642
Q ss_pred CCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCC----CCCCCCcceec
Q psy5372 277 DGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPF----YSEECTGLIAT 352 (586)
Q Consensus 277 ~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~----~S~~G~~~~~~ 352 (586)
...+.++++++.. +|++||+||||++.+. ....|+..+++|+|||++.++.++. ||++|+.+++
T Consensus 142 ---s~~l~~Ai~~A~~-----~GvlvVaAAGN~g~d~---~~~sPAs~~~VItVGA~d~~g~~a~~s~~fSn~G~~vDI- 209 (546)
T 2qtw_B 142 ---SRVLNAACQRLAR-----AGVVLVTAAGNFRDDA---CLYSPASAPEVITVGATNAQDQPVTLGTLGTNFGRCVDL- 209 (546)
T ss_dssp ---CHHHHHHHHHHHH-----TTCEEEEECCSBSSBG---GGEETTTCTTSEEEEEECTTSCBCEETTEECCBSTTCCE-
T ss_pred ---cHHHHHHHHHHHh-----CCCEEEEECCCCCCCC---CccCcccCCCEEEEEEecCCCCcccccCCcCCCCCcceE-
Confidence 2467888888877 6999999999998742 2235778899999999999999888 8999987777
Q ss_pred cccCCCCCCCceEEecCCC-CeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCC
Q psy5372 353 AYSGGISDPVKIITTDVHN-TCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419 (586)
Q Consensus 353 ~~~~~~apg~~i~st~~~~-~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 419 (586)
.+||..|+++...+ ..|..++|||||||+|||++|||++++|+|+++||+++|+.+|.+...
T Consensus 210 -----~APG~~I~St~~~~~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i 272 (546)
T 2qtw_B 210 -----FAPGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVI 272 (546)
T ss_dssp -----EEECSSEEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCS
T ss_pred -----EecCccEEeeccCCCCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccccc
Confidence 45899999997653 568899999999999999999999999999999999999999987643
|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=365.36 Aligned_cols=248 Identities=21% Similarity=0.214 Sum_probs=204.8
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
.||+|+++.+.. ..+...+|+ .. +|+||+|||||+||+.+||+|.+++.. .++|..... |..+
T Consensus 7 ~~W~l~~i~~~~-----~~~~~~~~~-~~-~G~gv~VaViDtGvd~~h~~l~~~~~~--~~~~~~~~~--------d~~g 69 (279)
T 3f7m_A 7 ATWGLTRISHRA-----RGSTAYAYD-TS-AGAGACVYVIDTGVEDTHPDFEGRAKQ--IKSYASTAR--------DGHG 69 (279)
T ss_dssp CCHHHHHHTCSS-----SCCCSEEEC-TT-TTTTEEEEEEESCCCTTCGGGTTCEEE--EEECSSSSS--------CSSS
T ss_pred CCCCHhhcCCCC-----CCCcceeec-CC-CCCCCEEEEEcCCCCCCChhhcccccc--ccCCCCCCC--------CCCC
Confidence 479998887532 233557888 44 999999999999999999999987644 344443221 6789
Q ss_pred hHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCC------CCeEEEcCCCCCCCCCCC
Q psy5372 207 HGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLD------KVDIYSGSWGPPDDGKSM 276 (586)
Q Consensus 207 HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~------~~~Vin~S~G~~~~~~~~ 276 (586)
|||||||+|++. ..||||+|+|+++|+++. ..+.++++++|+.... +++|||||||..
T Consensus 70 HGT~vAgii~~~------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~------ 137 (279)
T 3f7m_A 70 HGTHCAGTIGSK------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG------ 137 (279)
T ss_dssp HHHHHHHHHHCT------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE------
T ss_pred cHHHHHHHHhcC------ccccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC------
Confidence 999999999986 379999999999999864 3678899999987632 489999999964
Q ss_pred CCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccC
Q psy5372 277 DGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSG 356 (586)
Q Consensus 277 ~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~ 356 (586)
....+.++++++.+ +|++||+||||++.... ...|+..+++|+|||++.++.++.||++|+.+++.
T Consensus 138 --~~~~~~~a~~~a~~-----~gv~vV~AAGN~g~~~~---~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~di~---- 203 (279)
T 3f7m_A 138 --YSAALNQAAARLQS-----SGVFVAVAAGNDNRDAA---NTSPASEPTVCTVGATDSNDVRSTFSNYGRVVDIF---- 203 (279)
T ss_dssp --CCHHHHHHHHHHHH-----TTCEEEEECCSSSSBGG---GEETTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE----
T ss_pred --ccHHHHHHHHHHHH-----CCCEEEEEcCCCCCCCC---CcCCCCCCCEEEEeecCCCCCCCCCCCCCCCCeEE----
Confidence 23467888888887 69999999999987522 23477889999999999999999999999988774
Q ss_pred CCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCC
Q psy5372 357 GISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSH 421 (586)
Q Consensus 357 ~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 421 (586)
+||..|+++. .++.|..++|||||||+|||++|||++++|. +++|||++|+.||++....+
T Consensus 204 --ApG~~i~s~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~~~ 264 (279)
T 3f7m_A 204 --APGTSITSTW-IGGRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVLTS 264 (279)
T ss_dssp --EECSSEEEEC-GGGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCCBS
T ss_pred --ECCCCeEeec-CCCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccccC
Confidence 5889999985 4556889999999999999999999999999 99999999999999875543
|
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=391.09 Aligned_cols=279 Identities=19% Similarity=0.098 Sum_probs=202.1
Q ss_pred HHHcCCCCCCCcEEEEEecCccCCCcccccCCCC------------CC----------cccccCCCCCC-CCCCCC-CCC
Q psy5372 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAP------------EL----------SYNFNAEKWDI-TPRYED-PRN 205 (586)
Q Consensus 150 aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~------------~~----------~~~~~~~~~~~-~~~~~~-d~~ 205 (586)
+|. ...+|+||+|||||||||++||+|.++-.. .. .++|..+.... .+...+ |.+
T Consensus 14 ~~~-~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~~~~~~~~p~D~~ 92 (621)
T 3vta_A 14 VPR-RSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPISPGDVNGPRDTN 92 (621)
T ss_dssp CCC-CHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSCCTTCCSSSBCSS
T ss_pred ccc-cCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCccCCCCCCCCCCCC
Confidence 466 677899999999999999999999863110 00 01122211111 111112 789
Q ss_pred ChHHHHHHHHhccCCCCC--------cceeeecCcEEEEEEccCC---CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCC
Q psy5372 206 KHGTRCAGELVMKPNNSK--------CGVGVCYGARVGGVKLLDG---ETTDLIESKALQFGLDKVDIYSGSWGPPDDGK 274 (586)
Q Consensus 206 ~HGT~vAgiia~~~~n~~--------g~~GVAp~a~l~~~~v~~~---~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~ 274 (586)
||||||||||||+..+.. .+.||||+|+|+.+|++.. ..++++.+++++++ ++++|||||||......
T Consensus 93 GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~-~g~dVin~SlG~~~~~~ 171 (621)
T 3vta_A 93 GHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIA-DGVDIISLSVGGANPRH 171 (621)
T ss_dssp SHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHH-HTCSEEEECCCCCCGGG
T ss_pred cCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHH-hCCCEEEecCCCCCCCC
Confidence 999999999999754322 1469999999999999864 37889999999998 89999999999754221
Q ss_pred CCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeec--------------------
Q psy5372 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR-------------------- 334 (586)
Q Consensus 275 ~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~-------------------- 334 (586)
.....+..++.++.+ +|+++|+||||+|..... .+...+++++|++.+
T Consensus 172 ---~~~~~~~~~~~~a~~-----~Gi~vv~aAGN~g~~~~t----~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~ 239 (621)
T 3vta_A 172 ---YFVDAIAIGSFHAVE-----RGILTSNSAGNGGPNFFT----TASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGV 239 (621)
T ss_dssp ---GGGCTHHHHHHHHHT-----TTCEEEEECCSCCSSTTC----CCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEB
T ss_pred ---cCCcHHHHHHHHHHH-----CCCEEEEeCCCCCCCCcc----cCCCCCCceeEEEeeccccceeeEEeccCceeeee
Confidence 111235566666666 799999999999875221 112233444444321
Q ss_pred --------------------------------------------------------------------------------
Q psy5372 335 -------------------------------------------------------------------------------- 334 (586)
Q Consensus 335 -------------------------------------------------------------------------------- 334 (586)
T Consensus 240 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~ 319 (621)
T 3vta_A 240 SINTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSY 319 (621)
T ss_dssp CCCCSCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCSSCCCC
T ss_pred ecccCCCcccccccccccccccccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCCccccc
Confidence
Q ss_pred --------------------------------------CCCCCCCCCCCCCcc--eeccccCCCCCCCceEEecCC----
Q psy5372 335 --------------------------------------EDGQSPFYSEECTGL--IATAYSGGISDPVKIITTDVH---- 370 (586)
Q Consensus 335 --------------------------------------~~~~~a~~S~~G~~~--~~~~~~~~~apg~~i~st~~~---- 370 (586)
..+..+.||++||.. ....+|+..+||.+|+++.+.
T Consensus 320 ~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~ 399 (621)
T 3vta_A 320 PLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPV 399 (621)
T ss_dssp SSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCB
T ss_pred ccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCccccc
Confidence 123457899999874 234577888999999998642
Q ss_pred -----CCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCH
Q psy5372 371 -----NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINT 445 (586)
Q Consensus 371 -----~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna 445 (586)
+..|..++|||||||||||++|||+|++|+|+|++||.+|+.||++.+....+ .....||.|+||+
T Consensus 400 ~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~---------~~~~~~GaG~v~~ 470 (621)
T 3vta_A 400 GGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP---------QAEFAYGSGHVNP 470 (621)
T ss_dssp TTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCT---------TTHHHHTTCBCCH
T ss_pred cCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCC---------CCchhcCCCccCH
Confidence 35588999999999999999999999999999999999999999987643311 1235789999999
Q ss_pred HHHHHH
Q psy5372 446 FKLVSL 451 (586)
Q Consensus 446 ~~Av~~ 451 (586)
.+|++.
T Consensus 471 ~~A~~p 476 (621)
T 3vta_A 471 LKAVRP 476 (621)
T ss_dssp HHHSCC
T ss_pred HHhcCC
Confidence 999864
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=394.67 Aligned_cols=280 Identities=16% Similarity=0.114 Sum_probs=200.7
Q ss_pred CcEEEEEecCccCCCcccc--cCCCCCCcc----cccCCCCCCCCCCC-----CCCCChHHHHHHHHhccCCCCCcceee
Q psy5372 160 GVNIIIIDDGMEYTHEDIK--DSFAPELSY----NFNAEKWDITPRYE-----DPRNKHGTRCAGELVMKPNNSKCGVGV 228 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~--~~~~~~~~~----~~~~~~~~~~~~~~-----~d~~~HGT~vAgiia~~~~n~~g~~GV 228 (586)
+|+|||||||++.+|++.. ..+.....| ++.....++.+... .|.+||||||||||+|.. |+.|+.||
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l~~Y~~~~dyg~F~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~-N~~g~~GV 292 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRIGEYSRTHETRNVDDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH-SSRDVDGV 292 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEEECTTTTCCCCEESSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-SSSSSCCS
T ss_pred CEEEEEEeCCCCCCcccccccccccccccccccccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC-CCCCceee
Confidence 5999999999987766542 222211111 22222222211110 167899999999999997 88899999
Q ss_pred ecCcEEEEEEccCCC------chhHHHH----HHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCC
Q psy5372 229 CYGARVGGVKLLDGE------TTDLIES----KALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298 (586)
Q Consensus 229 Ap~a~l~~~~v~~~~------~~~~~~a----~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~ 298 (586)
||+|+|+++|+++.. ...++.+ ++++...++++|||||||...... ....+.+++.+++.. +
T Consensus 293 AP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~----~~~~l~~aI~~A~~~----~ 364 (1354)
T 3lxu_X 293 APNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWS----NSGRIGELMNEVVNK----Y 364 (1354)
T ss_dssp CTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCS----SCCHHHHHHHHHHHT----S
T ss_pred cCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCC----ccHHHHHHHHHHHHh----C
Confidence 999999999999752 2344444 444444468999999999864321 122567788887743 7
Q ss_pred CcEEEEecCCCCCCCCCCCCCCCCC--CceEEEEeeecCC--------------CCCCCCCCCCCcceeccccCCCCCCC
Q psy5372 299 GVLFVFAAGNGKYNGDNCAADGYIN--SIYTIAIASARED--------------GQSPFYSEECTGLIATAYSGGISDPV 362 (586)
Q Consensus 299 Gi~~V~AAGN~g~~~~~~~~~~~~~--~~~vi~Vga~~~~--------------~~~a~~S~~G~~~~~~~~~~~~apg~ 362 (586)
|++||+||||+|...+ .+..|+. ++++|+|||++.. +.++.||++|+.......++..+||.
T Consensus 365 GVlVVaAAGN~G~~~~--ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~~~~~g~~asFSS~GPt~dg~~KpDIaAPG~ 442 (1354)
T 3lxu_X 365 GVVWVASAGNHGPALC--TVGTPPDISQPSLIGVGAYVSPQMMEAEYAMREKLPGNVYTWTSRDPCIDGGQGVTVCAPGG 442 (1354)
T ss_dssp CCEEEEECCSCCSSSS--CCCTTTCSSSSCEEEEEEECCTTCCCC----------CCCCCCCCSCCSSSSCCEEEEEEC-
T ss_pred CcEEEEeCCCCCCCCC--ccCCcccccCCceEEEEeecCCCCcccccccccCCCCccccccCCCCCccCCCcceEEecCc
Confidence 9999999999998533 3345564 8999999999865 57889999999876555556678999
Q ss_pred ceEEecC-CCCeeeccCCCCchHHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCc
Q psy5372 363 KIITTDV-HNTCTCEHSGTSAAAPIAAGVLALALE----ANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437 (586)
Q Consensus 363 ~i~st~~-~~~~~~~~~GTS~AaP~VAG~aALl~~----~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~ 437 (586)
.|.++.. .+++|..++|||||||+|||++|||++ ++|.|++++||++|+.||++.+... +..
T Consensus 443 ~I~St~~~~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~~-------------~~~ 509 (1354)
T 3lxu_X 443 AIASVPQFTMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYVD-------------PFA 509 (1354)
T ss_dssp --------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTSC-------------TTT
T ss_pred eEEEeecCCCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCCC-------------ccc
Confidence 9998743 246789999999999999999999997 7999999999999999999875322 457
Q ss_pred ccccccCHHHHHHHHhccCCCCCcce
Q psy5372 438 YGFGLINTFKLVSLAKNWVNVPAQAK 463 (586)
Q Consensus 438 ~G~G~vna~~Av~~a~~~~~~~~~~~ 463 (586)
||||+||+.+|++.++.|...+....
T Consensus 510 ~G~GlLDa~~AV~~a~~~~~~p~~~v 535 (1354)
T 3lxu_X 510 QGHGLLNVEKAFEHLTEHRQSKDNML 535 (1354)
T ss_dssp SSSSBCCHHHHHHHHHTTTTCGGGGE
T ss_pred ccCCEeCHHHHHHHHHhcCCCCccce
Confidence 89999999999999999998876433
|
| >1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-25 Score=242.38 Aligned_cols=287 Identities=16% Similarity=0.082 Sum_probs=170.7
Q ss_pred hHHHHc-CCCCCCCcEEEEEecCccCCCcccccCCC----CCCccccc--CCCCCCCCCCCCCCCChHHHHHHHHhccCC
Q psy5372 148 VPVYQE-LNINGAGVNIIIIDDGMEYTHEDIKDSFA----PELSYNFN--AEKWDITPRYEDPRNKHGTRCAGELVMKPN 220 (586)
Q Consensus 148 ~~aw~~-~~~~G~gv~VaViDtGid~~Hpdl~~~~~----~~~~~~~~--~~~~~~~~~~~~d~~~HGT~vAgiia~~~~ 220 (586)
..+|.. .+++|+|++|||||.|.++.|+||...+. ....+..+ ++..+ ...++.++.++ .+..
T Consensus 200 ~~~Y~~~~~~~G~g~tIaIid~g~~~~~~DL~~f~~~~g~~~~~~~~v~~~g~~~-------~~~~~~~~~~~-Ea~L-- 269 (552)
T 1t1e_A 200 AQAYQFPEGLDGQGQCIAIIELGGGYDETSLAQYFASLGVSAPQVVSVSVDGATN-------QPTGDPNGPDG-EVEL-- 269 (552)
T ss_dssp HHHTTCCSSCCCTTCEEEEEESSCCCCHHHHHHHHHHHTCCCCCEEEEESTTCCC-------CCCSCTTSHHH-HHHH--
T ss_pred hhhhcCCCCCCCCCeEEEEEeCCCCCCHHHHHHHHHHcCCCCCceEEEecCCCCC-------CCCCCCCCCce-eeec--
Confidence 445541 24689999999999998899999874211 00011111 11110 11111111222 2211
Q ss_pred CCCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcC--CCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCC
Q psy5372 221 NSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGL--DKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298 (586)
Q Consensus 221 n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~--~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~ 298 (586)
+...+.||||+|+|+.+++.+ ..++++++++|++.. ++++|||||||....... ......+..++.++.. +
T Consensus 270 Dv~~~~gvAp~a~i~~~~~~~-~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~-~~~~~~~~~~~~~a~~-----~ 342 (552)
T 1t1e_A 270 DIEVAGALAPGAKIAVYFAPN-TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWA-PASIAAMNRAFLDAAA-----L 342 (552)
T ss_dssp HHHHHHHHCTTSEEEEEECCS-SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSC-HHHHHHHHHHHHHHHH-----T
T ss_pred chhhhhccCCCCeEEEEEcCC-CCchHHHHHHHHHhcccCCCCEEEecccCCcccCC-HHHHHHHHHHHHHHHh-----C
Confidence 112468999999999999864 456789999999874 689999999998643210 0112345566666666 6
Q ss_pred CcEEEEecCCCCCCCC----CCCCCCCCCCceEEEEeeecCCC-------CCCC------------CCCCCCc-------
Q psy5372 299 GVLFVFAAGNGKYNGD----NCAADGYINSIYTIAIASAREDG-------QSPF------------YSEECTG------- 348 (586)
Q Consensus 299 Gi~~V~AAGN~g~~~~----~~~~~~~~~~~~vi~Vga~~~~~-------~~a~------------~S~~G~~------- 348 (586)
|++||+||||+|.... ......|+.+|+||+|||++... +.++ ||++.+.
T Consensus 343 Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~e~aw~~~~~~~~sgGGfS~~~~~P~yQ~~~ 422 (552)
T 1t1e_A 343 GVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERA 422 (552)
T ss_dssp TCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEEETTEEEEEEECBCHHHHCBCCCEECSSSCCCTTTTTS
T ss_pred CeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccccCCCCCccceeeeccCCCCccCCCCCCCCCCCcchhhcc
Confidence 9999999999997521 13456788999999999998643 2332 4443221
Q ss_pred ----------ceeccccCCCCC---CCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhc--
Q psy5372 349 ----------LIATAYSGGISD---PVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWT-- 413 (586)
Q Consensus 349 ----------~~~~~~~~~~ap---g~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t-- 413 (586)
.....+++..++ +..+... .++.+..++|||||||+|||++|||+++++. ..-.+--+|...
T Consensus 423 ~~~~~~~~~~~~gR~~PDVsA~a~p~~~~~v~--~~g~~~~~~GTS~AaP~vAGv~ALl~~~~g~-~lG~~np~LY~~~~ 499 (552)
T 1t1e_A 423 NVPPSANPGAGSGRGVPDVAGNADPATGYEVV--IDGETTVIGGTAAVAPLFAALVARINQKLGK-PVGYLNPTLYQLPP 499 (552)
T ss_dssp CCCCCSSTTCCCCCEECSEEEECCGGGCEEEE--ETTEEEEEESGGGHHHHHHHHHHHHHHHHTS-CCCCCHHHHTTSCG
T ss_pred cccccccccCcCCCCCCceecccCCCCCeEEE--eCCeEEeccccchhhHHHHHHHHHHhhhccC-CCCCccHHHHhcCc
Confidence 011122222333 3333322 3456788999999999999999999998542 100111222221
Q ss_pred --CCcCCCCCCCCc---cccCCCcccCCcccccccCHHHHHHHHhc
Q psy5372 414 --SEREPLSHVSGW---ERNARDLWFHSAYGFGLINTFKLVSLAKN 454 (586)
Q Consensus 414 --A~~~~~~~~~~w---~~n~~g~~~~~~~G~G~vna~~Av~~a~~ 454 (586)
-.++....+... ..-.++..||..+|+|.+|+.+++++++.
T Consensus 500 ~~f~Dit~G~n~~~~~~~~~~a~~GwD~~TGlGtpn~~~l~~~~~~ 545 (552)
T 1t1e_A 500 EVFHDITEGNNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLP 545 (552)
T ss_dssp GGEECCCSCBCCCSSSSCCSBCCSSCBTTTBTCEECHHHHHHHHCC
T ss_pred cceeecccCCCCCcCCCCCcCCCCCCCCCccccccCHHHHHHHHhh
Confidence 111211111000 01123455899999999999999988764
|
| >1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=209.97 Aligned_cols=221 Identities=14% Similarity=0.036 Sum_probs=143.2
Q ss_pred eecCcEEEEEEccCC---CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEE
Q psy5372 228 VCYGARVGGVKLLDG---ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304 (586)
Q Consensus 228 VAp~a~l~~~~v~~~---~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~ 304 (586)
+||+++++.+++.+. ..+++++++.|++..++++|||||||..+...........+.++++++.. +|++||+
T Consensus 92 ~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~-----~Gitvv~ 166 (372)
T 1ga6_A 92 AGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAA-----QGQTFSV 166 (372)
T ss_dssp TTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHH-----TTCEEEE
T ss_pred cCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHh-----CCcEEEE
Confidence 689999999999863 46789999999987679999999999753210001112345666666666 6999999
Q ss_pred ecCCCCCCCC---------CCCCCCCCCCceEEEEeeecCCCC--------C----------------CCCCCCCCcc--
Q psy5372 305 AAGNGKYNGD---------NCAADGYINSIYTIAIASAREDGQ--------S----------------PFYSEECTGL-- 349 (586)
Q Consensus 305 AAGN~g~~~~---------~~~~~~~~~~~~vi~Vga~~~~~~--------~----------------a~~S~~G~~~-- 349 (586)
||||+|.... ......|+.+|+|++||+++.... . ..||++++.-
T Consensus 167 AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~~e~~~~~~~~~~~~~~~sgGGfS~~~~~P~y 246 (372)
T 1ga6_A 167 SSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSW 246 (372)
T ss_dssp ECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEEECCGG
T ss_pred EECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeeccCCCCccccceeeeccccccccccccCCCCcCCCCCCccc
Confidence 9999997421 123456788999999999985431 1 1133332110
Q ss_pred --------eeccccCCC---CCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCC-C--CHHHHHHHHHhcC-
Q psy5372 350 --------IATAYSGGI---SDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPN-M--TWRDCQHILAWTS- 414 (586)
Q Consensus 350 --------~~~~~~~~~---apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~-l--t~~~v~~~L~~tA- 414 (586)
....+++.. +|+..+.... ++.+..++|||||||+|||++|||+++++. | -...+.++.....
T Consensus 247 Q~~~~~~~~gR~~PDVsa~aapg~~~~~~~--~g~~~~~~GTS~AaP~vAGi~ALl~~~~~~~lG~~np~LY~~a~~~~~ 324 (372)
T 1ga6_A 247 QSVVSGTPGRRLLPDISFDAAQGTGALIYN--YGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISSTPS 324 (372)
T ss_dssp GGGSTTSCSEEEECSEEEECCGGGCEEEEE--TTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHCGG
T ss_pred ccccccCCCCccCCceecccCCCCCEEEEe--CCcEEeccccchHHHHHHHHHHHHHhcCCCCcCccCHHHHhhcccCCc
Confidence 012233333 6776666543 456788999999999999999999998753 2 2233343322111
Q ss_pred --CcCCCCCCCCc-cccCCCcccCCcccccccCHHHHHHHHhcc
Q psy5372 415 --EREPLSHVSGW-ERNARDLWFHSAYGFGLINTFKLVSLAKNW 455 (586)
Q Consensus 415 --~~~~~~~~~~w-~~n~~g~~~~~~~G~G~vna~~Av~~a~~~ 455 (586)
.++....+..- ..-.++..||..+|+|.+|+.+++++++.+
T Consensus 325 ~f~Dit~G~n~~~~~g~~a~~GwD~~TGlGtpn~~~l~~~~~~~ 368 (372)
T 1ga6_A 325 LVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSN 368 (372)
T ss_dssp GEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHH
T ss_pred ceeecccCCCCCCCCCCCCCCCCCCCccCchhhHHHHHHHHhhc
Confidence 12211111100 011234568999999999999999998865
|
| >3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-10 Score=125.85 Aligned_cols=218 Identities=13% Similarity=0.043 Sum_probs=115.8
Q ss_pred eecCcEEEEEEccCC--CchhHHHHHHhhh-cCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEE
Q psy5372 228 VCYGARVGGVKLLDG--ETTDLIESKALQF-GLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVF 304 (586)
Q Consensus 228 VAp~a~l~~~~v~~~--~~~~~~~a~~~~~-~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~ 304 (586)
++++..++.+...+. ....+++.+.... ..+..+|||+|||..+.... ......+..++.++.. +|+.||+
T Consensus 264 ~~~~i~~~~~~~~g~~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~-~~y~~~~~~~~~~~~~-----~Gitv~~ 337 (544)
T 3edy_A 264 AGANISTWVYSSPGRHEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLS-SAYIQRVNTELMKAAA-----RGLTLLF 337 (544)
T ss_dssp HSTTSEEEEECCCSCCTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSC-HHHHHHHHHHHHHHHH-----TTCEEEE
T ss_pred cCCCceEEEEecCCcccccccHHHHHHHHhccCCCCcEEEecCCCcccccC-HHHHHHHHHHHHHHHh-----CCeEEEE
Confidence 445555554433221 1233443333222 23578999999998653210 1112234556666666 5999999
Q ss_pred ecCCCCCCCC------CCCCCCCCCCceEEEEeeecCCC------CCCCCCCC-CCccee--------------------
Q psy5372 305 AAGNGKYNGD------NCAADGYINSIYTIAIASAREDG------QSPFYSEE-CTGLIA-------------------- 351 (586)
Q Consensus 305 AAGN~g~~~~------~~~~~~~~~~~~vi~Vga~~~~~------~~a~~S~~-G~~~~~-------------------- 351 (586)
|+||+|.... ......|+++|+|++||+++... +..++.+- |-+...
T Consensus 338 ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~~~~~~~~e~~~~~sgGGfS~~f~~P~yQ~~~v~~yl~~~~~~ 417 (544)
T 3edy_A 338 ASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPSYQEEAVTKFLSSSPHL 417 (544)
T ss_dssp ECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEESSSSCCCCEEECTTCCCEEEEEEECCGGGHHHHHHHHHHCSSC
T ss_pred ecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeeccCCCcccccceeecCCCccCCCCCCChhHHHHHHHHHhccCCC
Confidence 9999987411 01245688999999999997431 12222222 211100
Q ss_pred ----------ccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhh-----CCCCCH--HHHHHHHHhcC
Q psy5372 352 ----------TAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA-----NPNMTW--RDCQHILAWTS 414 (586)
Q Consensus 352 ----------~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~-----~p~lt~--~~v~~~L~~tA 414 (586)
..+|+..+.+...+.. ..+......+|||+|||++||++|||.++ .|.|.. ..+.++-...-
T Consensus 418 ~~~~~~n~~gR~~PDVaa~~~~~~v~-~~g~~~~~~gGTS~aaP~~A~~~al~n~~r~~~g~~~lGflNP~LY~~~~~~f 496 (544)
T 3edy_A 418 PPSSYFNASGRAYPDVAALSDGYWVV-SNRVPIPWVSGTSASTPVFGGILSLINEHRILSGRPPLGFLNPRLYQQHGAGL 496 (544)
T ss_dssp CCGGGSCTTEEEECSEEEECSSEEEE-ETTEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCHHHHHHTTTTTE
T ss_pred CcccccccCCCcCCCeecccCCEEEE-ECCeeeeeecCcccchhHHHHHHHHHHHHHHhcCCCCcCCccHHHHhhchhhc
Confidence 1111111222222211 11222234799999999999999999886 455542 22322211111
Q ss_pred CcCCCCCCCCc-------cccCCCcccCCcccccccCHHHHHHHH
Q psy5372 415 EREPLSHVSGW-------ERNARDLWFHSAYGFGLINTFKLVSLA 452 (586)
Q Consensus 415 ~~~~~~~~~~w-------~~n~~g~~~~~~~G~G~vna~~Av~~a 452 (586)
.++....+.+- ..-.++..||...|+|.+|..+.+++.
T Consensus 497 ~Dit~G~n~~c~~~~~~~~g~~A~~GwD~vTGlGtp~~~~l~~~~ 541 (544)
T 3edy_A 497 FDVTRGCHESCLDEEVEGQGFCSGPGWDPVTGWGTPNFPALLKTL 541 (544)
T ss_dssp ECCCSCEEEBCCSTTTTTEEEECCSSCBTTTBTCEECHHHHHHTT
T ss_pred cccccCcCCCcCCCCCCCCCcCCCCCCcccccCcccCHHHHHHHH
Confidence 12211111000 011255668999999999999988764
|
| >1kn6_A Prohormone convertase 1; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Mus musculus} SCOP: d.58.3.3 | Back alignment and structure |
|---|
Probab=98.97 E-value=3e-10 Score=91.75 Aligned_cols=82 Identities=35% Similarity=0.697 Sum_probs=69.0
Q ss_pred cceeeeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecchhhc
Q psy5372 8 AEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFAKHL 87 (586)
Q Consensus 8 ~~~~~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~~~~ 87 (586)
...++|+|+|++..|.+.|++||+++|+.+.++|.+++++|.|.+......+...+......|+.+|.|.|+|++...++
T Consensus 8 ~~~~tn~waV~i~~g~~~A~~iA~k~GF~nlGqIg~l~~~YhF~H~~~~krs~r~s~~~~~~L~~dp~V~W~eQQ~~k~R 87 (90)
T 1kn6_A 8 KRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSALHITKRLSDDDRVTWAEQQYEKER 87 (90)
T ss_dssp ---CCCCEEEECSSTHHHHHHHHHHHTCEECCCCSSSSCEEEEECCSCCSSSCCCCCTTTTHHHHHHTTSEEECCC----
T ss_pred ccccceeEEEEccCcHHHHHHHHHHcCcEEeccCCCCCCEEEEEeCCCCcccccccHHHHHhhccCCCcceEEccccccc
Confidence 35689999999998888999999999999999999999999999998888888888888899999999999999998877
Q ss_pred cc
Q psy5372 88 RK 89 (586)
Q Consensus 88 ~~ 89 (586)
.+
T Consensus 88 ~K 89 (90)
T 1kn6_A 88 SK 89 (90)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B | Back alignment and structure |
|---|
Probab=98.21 E-value=6.2e-07 Score=71.59 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=52.6
Q ss_pred cceeeeeEEEEEcCCcch---HHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecch
Q psy5372 8 AEHFLNQWVVHISGDPDI---ANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFA 84 (586)
Q Consensus 8 ~~~~~~~~iV~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~ 84 (586)
++.++++|||.||++... ...+++++|.++...+.. +++|++.++++.+++|+++|+|++||||..
T Consensus 4 ~~~i~~~YIV~~k~~~~~~~~~~~~~~~~g~~i~~~y~~-----------~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 4 KSNGEKKYIVGFKQGFKSCAKKEDVISEKGGKLQKCFKY-----------VDAASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp ----CCEEEEEECTTCCSHHHHHHHHHTTTCEEEEECSS-----------SSEEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred cccCCCCEEEEECCCCChHHHHHHHHHHcCCcceEEEcc-----------cEEEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 567899999999987532 235666777766655543 455677888999999999999999999999
Q ss_pred hhccc
Q psy5372 85 KHLRK 89 (586)
Q Consensus 85 ~~~~~ 89 (586)
+++..
T Consensus 73 v~~~t 77 (80)
T 3cnq_P 73 YRALS 77 (80)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 88764
|
| >2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P | Back alignment and structure |
|---|
Probab=97.90 E-value=1.1e-05 Score=69.86 Aligned_cols=71 Identities=8% Similarity=-0.055 Sum_probs=50.8
Q ss_pred ccceeeeeEEEEEcCCcchH--H-------HHHHH--hCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCc
Q psy5372 7 RAEHFLNQWVVHISGDPDIA--N-------QVAQD--LGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDAR 75 (586)
Q Consensus 7 ~~~~~~~~~iV~~~~~~~~~--~-------~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 75 (586)
....+|++|||+||++.... . .++++ +|.++.. .|. ..+++|++.++++.+++|+++|.
T Consensus 42 ~~~~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~---------~Y~-~~~~GFaa~l~~~~~~~L~~~p~ 111 (124)
T 2qtw_A 42 DPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILH---------VFH-GLLPGFLVKMSGDLLELALKLPH 111 (124)
T ss_dssp GGGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEE---------EEC-SSSCEEEEECCGGGHHHHHTSTT
T ss_pred cccCCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEE---------Eec-ccceEEEEEcCHHHHHHHHcCCC
Confidence 46789999999999875321 1 12222 3333333 332 34677888999999999999999
Q ss_pred eeEEeecchhhc
Q psy5372 76 VIWTQQQFAKHL 87 (586)
Q Consensus 76 V~~ve~~~~~~~ 87 (586)
|.+||||..++.
T Consensus 112 V~~VE~D~~v~a 123 (124)
T 2qtw_A 112 VDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEEEE
T ss_pred CcEEEeCceEec
Confidence 999999988754
|
| >2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P | Back alignment and structure |
|---|
Probab=97.75 E-value=2.9e-05 Score=66.20 Aligned_cols=72 Identities=8% Similarity=-0.047 Sum_probs=50.7
Q ss_pred cccceeeeeEEEEEcCCcch--HH-------HHHHH--hCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCC
Q psy5372 6 ERAEHFLNQWVVHISGDPDI--AN-------QVAQD--LGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDA 74 (586)
Q Consensus 6 ~~~~~~~~~~iV~~~~~~~~--~~-------~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 74 (586)
...+.++++|||.|+++... .. .+..+ .+.++ .|.|. ..+++|++.++++++++|+++|
T Consensus 31 ~~~~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i---------~~sY~-~~~~GFaa~Lt~~~~~~L~~~P 100 (114)
T 2w2n_P 31 KDPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKI---------LHVFH-GLLPGFLVKMSGDLLELALKLP 100 (114)
T ss_dssp SGGGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEE---------EEEEC-SSSSEEEEECCGGGHHHHHTST
T ss_pred CCccCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCce---------EEEec-ccceEEEEEcCHHHHHHHHcCC
Confidence 34678999999999976421 11 11111 22222 23342 3577889999999999999999
Q ss_pred ceeEEeecchhhc
Q psy5372 75 RVIWTQQQFAKHL 87 (586)
Q Consensus 75 ~V~~ve~~~~~~~ 87 (586)
+|++||||..++.
T Consensus 101 ~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 101 HVDYIEEDSSVFA 113 (114)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CccEEEeCceEec
Confidence 9999999998764
|
| >1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A | Back alignment and structure |
|---|
Probab=97.58 E-value=1.6e-05 Score=62.48 Aligned_cols=66 Identities=9% Similarity=-0.027 Sum_probs=48.7
Q ss_pred eeEEEEEcCCcch-----HHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCC--CceeEEeecchh
Q psy5372 13 NQWVVHISGDPDI-----ANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLND--ARVIWTQQQFAK 85 (586)
Q Consensus 13 ~~~iV~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--p~V~~ve~~~~~ 85 (586)
++|||.||++... ...+++++|.++.+.+ ....+++|++.++++.+++|+++ |.|++||+|..+
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~gg~i~~~y---------~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v 73 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAEGGTITNEY---------NMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVA 73 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHTCCCCEEE---------EETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhhCCceEEEE---------EcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEE
Confidence 7999999987532 2345566665444333 22345677888999999999999 899999999887
Q ss_pred hc
Q psy5372 86 HL 87 (586)
Q Consensus 86 ~~ 87 (586)
+.
T Consensus 74 ~~ 75 (76)
T 1v5i_B 74 HA 75 (76)
T ss_dssp EC
T ss_pred eC
Confidence 54
|
| >2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00037 Score=52.80 Aligned_cols=63 Identities=10% Similarity=-0.046 Sum_probs=48.1
Q ss_pred eeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecchhhc
Q psy5372 13 NQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFAKHL 87 (586)
Q Consensus 13 ~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~~~~ 87 (586)
-+|||.|+.+ ....++.+.+|.++..++..+ +..++.++.+.++.|+.+|+|+|||+|..++.
T Consensus 2 ~~~IV~f~~~-~~~~~~i~~~gG~i~~~~~~I-----------~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKA-KFNPHEVLGIGGHIVYQFKLI-----------PAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGG-GCCGGGGGGGTCEEEEECSSS-----------SEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCc-chhHHHHHHCCCEEEEEecCC-----------cEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 4799999974 333556788899998888754 23445666777899999999999999987653
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=85.67 E-value=0.35 Score=57.07 Aligned_cols=25 Identities=24% Similarity=0.489 Sum_probs=23.0
Q ss_pred CCCCCCcEEEEEecCccCCCccccc
Q psy5372 155 NINGAGVNIIIIDDGMEYTHEDIKD 179 (586)
Q Consensus 155 ~~~G~gv~VaViDtGid~~Hpdl~~ 179 (586)
.|.|+||+|||+|||||..+|-|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 6899999999999999999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 586 | ||||
| d1p8ja2 | 334 | c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou | 1e-52 | |
| d2id4a2 | 339 | c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak | 3e-51 | |
| d1p8ja1 | 136 | b.18.1.20 (A:443-578) Furin, C-terminal domain {Mo | 5e-28 | |
| d1to2e_ | 281 | c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie | 8e-25 | |
| d2id4a1 | 141 | b.18.1.20 (A:461-601) Kexin, C-terminal domain {Ba | 9e-24 | |
| d1dbia_ | 280 | c.41.1.1 (A:) Thermostable serine protease {Bacill | 5e-21 | |
| d1r0re_ | 274 | c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls | 6e-21 | |
| d1r6va_ | 671 | c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni | 2e-20 | |
| d1gcia_ | 269 | c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: | 8e-20 | |
| d1kn6a_ | 73 | d.58.3.3 (A:) Prohormone convertase 1 pro-domain { | 1e-16 | |
| d2ixta1 | 309 | c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus | 1e-15 | |
| d1thma_ | 279 | c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar | 2e-14 | |
| d2pwaa1 | 279 | c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach | 6e-14 | |
| d1wmda2 | 318 | c.41.1.1 (A:1-318) Alkaline serine protease kp-43, | 3e-13 | |
| d1ga6a_ | 369 | c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pse | 1e-12 | |
| d1t1ga_ | 357 | c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac | 5e-12 | |
| d1v6ca_ | 435 | c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud | 2e-08 | |
| d1v6ca_ | 435 | c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud | 4e-07 |
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Furin, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (458), Expect = 1e-52
Identities = 152/336 (45%), Positives = 218/336 (64%), Gaps = 9/336 (2%)
Query: 121 TDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS 180
TD +P QWY LS +++ DLN+ + G G+ + I+DDG+E H D+ +
Sbjct: 6 TDPKFPQQWY-----LSGVTQR-DLNVKEAW-AQGFTGHGIVVSILDDGIEKNHPDLAGN 58
Query: 181 FAPELSYNFNAEKWDITPRYEDPR-NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239
+ P S++ N + D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV++
Sbjct: 59 YDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRM 118
Query: 240 LDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299
LDGE TD +E+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G G
Sbjct: 119 LDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLG 178
Query: 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359
+FV+A+GNG D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G
Sbjct: 179 SIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQ 238
Query: 360 DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419
+ +I+TTD+ CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+ L
Sbjct: 239 NEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL 298
Query: 420 SHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455
+ W N +YG+GL++ +V+LA+NW
Sbjct: 299 NA-DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNW 333
|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Kexin, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 177 bits (449), Expect = 3e-51
Identities = 142/336 (42%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKD 179
D + QW+ + S D+N++ ++ NI GAGV I+DDG++Y +ED+KD
Sbjct: 12 INDPLFERQWHLVNPSFPGS----DINVLDLWYN-NITGAGVVAAIVDDGLDYENEDLKD 66
Query: 180 SFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239
+F E S++FN PR D + HGTRCAGE+ K N+ CGVGV Y A++ G+++
Sbjct: 67 NFCAEGSWDFNDNTNLPKPRLSD--DYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRI 124
Query: 240 LDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299
L G+ T E+ +L +GLD DIYS SWGP DDG+ + GP L K A+ +G+ EGR KG
Sbjct: 125 LSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKG 184
Query: 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359
++VFA+GNG GDNC DGY NSIY+I I + P YSE C+ ++A YS
Sbjct: 185 AIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYS--SG 242
Query: 360 DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419
I ++D++ C+ H GTSAAAP+AAGV L LEANPN+TWRD Q++ ++
Sbjct: 243 SGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEK 302
Query: 420 SHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455
+ W +A + YGFG I+ KL+ ++K W
Sbjct: 303 NADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTW 338
|
| >d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Proprotein convertase P-domain domain: Furin, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 107 bits (267), Expect = 5e-28
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 458 VPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGD 517
V Q KC + + V + +T C + + LEHV A L + + RRGD
Sbjct: 2 VAPQRKCIVEILVEPKD---IGKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGD 58
Query: 518 VRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTKYDG 575
+ I L +P G +S L+ RP D GF DW+ +T W EDP GEW EI +T
Sbjct: 59 LAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEAN 116
|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
Score = 102 bits (254), Expect = 8e-25
Identities = 69/313 (22%), Positives = 110/313 (35%), Gaps = 50/313 (15%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
P G+ V + +ID G++ +H D+K + + + + N H
Sbjct: 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAG----GASMVPSETNPF----QDNNSH 64
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDI 262
GT AG V NNS +GV A + VK+L G+ + +I +++ + +D+
Sbjct: 65 GTHVAGT-VAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIIN--GIEWAIANNMDV 121
Query: 263 YSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYI 322
+ S G P ++ + GV+ V AAGN +G +
Sbjct: 122 INMSLGGPSGSAALKAA------------VDKAVASGVVVVAAAGNEGTSGSSSTVGYPG 169
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
IA+ + Q +S L A P I + + ++GTS
Sbjct: 170 KYPSVIAVGAVDSSNQRASFSSVGPELDVMA-------PGVSIQSTLPGNKYGAYNGTSM 222
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGL 442
A+P AG AL L +PN T + L T L YG GL
Sbjct: 223 ASPHVAGAAALILSKHPNWTNTQVRSSLENT---------------TTKLGDSFYYGKGL 267
Query: 443 INTFKLVSLAKNW 455
IN +
Sbjct: 268 INVQAAAQHHHHH 280
|
| >d2id4a1 b.18.1.20 (A:461-601) Kexin, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 141 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Proprotein convertase P-domain domain: Kexin, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 95.1 bits (236), Expect = 9e-24
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 485 SFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTG 544
I+ S K +EHV T++I+ RG ++L +P+G+ S L RP+D G
Sbjct: 29 VITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVRPRDVSSEG 88
Query: 545 FVDWSILTLKHWGEDPVGEWKFEIFDTKY 573
F DW+ +++ HWGE+ VG+WK ++ T+
Sbjct: 89 FKDWTFMSVAHWGENGVGDWKIKVKTTEN 117
|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermostable serine protease species: Bacillus sp., AK.1 [TaxId: 1409]
Score = 91.2 bits (225), Expect = 5e-21
Identities = 61/302 (20%), Positives = 106/302 (35%), Gaps = 51/302 (16%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
++ +G I +ID G++YTH D ++ ++ D P + H A
Sbjct: 25 DVTKGSSGQEIAVIDTGVDYTHPD----LDGKVIKGYDFVDNDYDPMDLNNHGTH---VA 77
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWG 268
G + NN+ G+ R+ V+ LD G +D+ ++ IY+ G
Sbjct: 78 GIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADA----------IIYAADSG 127
Query: 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTI 328
S+ KG + V AAGN + A Y N I
Sbjct: 128 AEVINLSLGCD---CHTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPA-SYENVIAVG 183
Query: 329 AIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAA 388
A+ + +S T + A P I + + SGTS A+P A
Sbjct: 184 AVDQ---YDRLASFSNYGTWVDVVA-------PGVDIVSTITGNRYAYMSGTSMASPHVA 233
Query: 389 GVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKL 448
G+ AL + + + + T+++ +SG + +G IN++
Sbjct: 234 GLAALLA--SQGRNNIEIRQAIEQTADK-----ISGTGTY---------FKYGRINSYNA 277
Query: 449 VS 450
V+
Sbjct: 278 VT 279
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus subtilis, carlsberg [TaxId: 1423]
Score = 90.8 bits (224), Expect = 6e-21
Identities = 58/304 (19%), Positives = 96/304 (31%), Gaps = 45/304 (14%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
Q GA V + ++D G++ +H D+ +F A + + H
Sbjct: 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVG----GASFVAGEAY--NTDGNGHGTH 66
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSW 267
V +N+ +GV + VK+L+ + I SG
Sbjct: 67 VAGT----VAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYS-----------GIVSGIE 111
Query: 268 GPPDDGKSMDGPGKLSKAAID--RGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSI 325
+G + + + + +GV+ V AAGN +G
Sbjct: 112 WATTNGMDVINMSLGGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYD 171
Query: 326 YTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAP 385
IA+ + + +S L A G+ +GTS A+P
Sbjct: 172 SVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTY-------PTNTYATLNGTSMASP 224
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINT 445
AG AL L +PN++ ++ L+ T A L YG GLIN
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSST---------------ATYLGSSFYYGKGLINV 269
Query: 446 FKLV 449
Sbjct: 270 EAAA 273
|
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Score = 92.8 bits (229), Expect = 2e-20
Identities = 56/315 (17%), Positives = 100/315 (31%), Gaps = 47/315 (14%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G + + ++D G++ TH D++ Y ++ GT AG +
Sbjct: 153 GTNIIVAVVDTGVDGTHPDLEGQVIA--GYRPAFDEELPAGTDSSYGGSAGTHVAGTIAA 210
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD--------GETTDLIESKALQFGLD-KVDIYSGSWG 268
K + VGV GA++ + + D G D + + + D + + SWG
Sbjct: 211 KKDGK-GIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWG 269
Query: 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTI 328
+M + V +AGN + + GY I
Sbjct: 270 GWGYSYTMKEAFDYAMEHGVV------------MVVSAGNNTSDSHHQYPAGYPGVIQVA 317
Query: 329 AIASAREDGQSPFYSEECTGLIATAYSGGI-----------SDPVKIITTDVHNTCTCEH 377
A+ + +S G+ A I + + +
Sbjct: 318 ALDYYGGTFRVAGFSSRSDGVSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYY 377
Query: 378 SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
GTS AAP GV+A+ L+ PN + +L T+ +GW+
Sbjct: 378 QGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFN---GNGWDH---------D 425
Query: 438 YGFGLINTFKLVSLA 452
G+GL+ +
Sbjct: 426 TGYGLVKLDAALQGP 440
|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus lentus [TaxId: 1467]
Score = 87.3 bits (215), Expect = 8e-20
Identities = 56/304 (18%), Positives = 99/304 (32%), Gaps = 50/304 (16%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
P + G+GV + ++D G+ TH D+ +F + + + H
Sbjct: 13 APAAHNRGLTGSGVKVAVLDTGIS-THPDLNI----RGGASFVPGEPS--TQDGNGHGTH 65
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD--GETTDLIESKALQFGLDKVDIYSG 265
NNS +GV A + VK+L G + ++ L++ + +
Sbjct: 66 VAGTIA----ALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVAN 121
Query: 266 SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSI 325
+ +GVL V A+GN + A
Sbjct: 122 LSLGSPSPSATL-----------EQAVNSATSRGVLVVAASGNSGAGSISYPA----RYA 166
Query: 326 YTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAP 385
+A+ + ++ +S+ GL A P + + + +GTS A P
Sbjct: 167 NAMAVGATDQNNNRASFSQYGAGLDIVA-------PGVNVQSTYPGSTYASLNGTSMATP 219
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINT 445
AG AL + NP+ + ++ L T A L + YG GL+N
Sbjct: 220 HVAGAAALVKQKNPSWSNVQIRNHLKNT---------------ATSLGSTNLYGSGLVNA 264
Query: 446 FKLV 449
Sbjct: 265 EAAT 268
|
| >d1kn6a_ d.58.3.3 (A:) Prohormone convertase 1 pro-domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 73 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Prohormone convertase 1 pro-domain domain: Prohormone convertase 1 pro-domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 72.5 bits (178), Expect = 1e-16
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGL 70
F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++ T L
Sbjct: 1 FVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSALHITKRL 60
Query: 71 LNDARVIWTQQQF 83
+D RV W +QQ+
Sbjct: 61 SDDDRVTWAEQQY 73
|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Sphericase species: Bacillus sphaericus [TaxId: 1421]
Score = 75.7 bits (184), Expect = 1e-15
Identities = 50/300 (16%), Positives = 96/300 (32%), Gaps = 19/300 (6%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
G+G+NI ++D G+ +H D+ ++ +F I D N HGT A
Sbjct: 20 TSTTGGSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPINNSCTDR-NGHGTHVA 76
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDD 272
G + + + G+ + ++ D + +
Sbjct: 77 GTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTII 136
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIAS 332
S+ ++ KGVL V AAGN Y+ G + + +A
Sbjct: 137 SMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALE 193
Query: 333 AREDGQSPFYSEECTGLIATAYSGGISDPVKI--------ITTDVHNTCTCEHSGTSAAA 384
+ + ++ + + + I + + +N SGTS A
Sbjct: 194 NVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGGYNTISGTSMAT 253
Query: 385 PIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
P +G+ A NP+++ + L ++ + G + A GFG
Sbjct: 254 PHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAA-----IGDDYASGFGFAR 308
|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermitase species: Thermoactinomyces vulgaris [TaxId: 2026]
Score = 71.7 bits (174), Expect = 2e-14
Identities = 59/295 (20%), Positives = 95/295 (32%), Gaps = 49/295 (16%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+G I I+D G++ H D+ + N N HGT CAG
Sbjct: 29 GSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTP-------QNGNGHGTHCAGIAAA 81
Query: 218 KPNNSKCGVGVCYGARVGGVKLL--DGETTDLIESKALQFGLD-KVDIYSGSWGPPDDGK 274
NNS G A + V++L G T + + + D + S S G
Sbjct: 82 VTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTVGNS 141
Query: 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR 334
+ + + V AAGN N IA+AS
Sbjct: 142 GLQQAVNYAWNKGS------------VVVAAAGNAGNTAPNY----PAYYSNAIAVASTD 185
Query: 335 EDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALA 394
++ +S + + A I + + SGTS A P AGV L
Sbjct: 186 QNDNKSSFSTYGSWVDVAAP-------GSSIYSTYPTSTYASLSGTSMATPHVAGVAGLL 238
Query: 395 LEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLV 449
+ + + + T+++ +SG + + G +N +K V
Sbjct: 239 ASQGR--SASNIRAAIENTADK-----ISGTG---------TYWAKGRVNAYKAV 277
|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Proteinase K species: Fungus (Tritirachium album), strain limber [TaxId: 37998]
Score = 70.1 bits (170), Expect = 6e-14
Identities = 42/254 (16%), Positives = 72/254 (28%), Gaps = 29/254 (11%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G G + +ID G+E +H + + +Y +++ + GT + +
Sbjct: 30 GQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDG-----NGHGTHCAGTVGSRTYGV 84
Query: 218 KPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD 277
GV V G + + K K + S S G
Sbjct: 85 AKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKN-NRNCPKGVVASLSLGGGYSSSVNS 143
Query: 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDG 337
+ Q GV+ AAGN + N + + ++
Sbjct: 144 AAAR-------------LQSSGVMVAVAAGNNNADARNY---SPASEPSVCTVGASDRYD 187
Query: 338 QSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA 397
+ +S + L I T SGTS A P AG+ A +
Sbjct: 188 RRSSFSNYGSVLDIFGPGTDILSTW-------IGGSTRSISGTSMATPHVAGLAAYLMTL 240
Query: 398 NPNMTWRDCQHILA 411
C++I
Sbjct: 241 GKTTAASACRYIAD 254
|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease kp-43, N-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Score = 68.8 bits (166), Expect = 3e-13
Identities = 47/325 (14%), Positives = 86/325 (26%), Gaps = 42/325 (12%)
Query: 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGT 209
+ G G + + D G++ D A + N HGT
Sbjct: 13 AQSSYGLYGQGQIVAVADTGLDTGRNDSSMH--EAFRGKITALYALGRTNNANDTNGHGT 70
Query: 210 RCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGP 269
AG ++ + +K + L L + + S G
Sbjct: 71 HVAGSVLGNGSTNKGMAPQAN-------LVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGA 123
Query: 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIA 329
S + R + + + + +FAAGN NG +A G + T+
Sbjct: 124 RIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVG 183
Query: 330 IASAREDGQSPFYSEECTGLIATAYSGGISDPVKI--------------------ITTDV 369
+ ++ +K
Sbjct: 184 ATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAPDSSFWAN 243
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNA 429
H++ GTS A PI AG +A E + L + A
Sbjct: 244 HDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI----------AGA 293
Query: 430 RDL---WFHSAYGFGLINTFKLVSL 451
D+ + + G+G + K +++
Sbjct: 294 ADIGLGYPNGNQGWGRVTLDKSLNV 318
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Length = 369 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Score = 67.3 bits (163), Expect = 1e-12
Identities = 48/354 (13%), Positives = 87/354 (24%), Gaps = 64/354 (18%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216
A + II G F + T + G+
Sbjct: 23 TAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTG---SSNGDYSDDQQGQ-G 78
Query: 217 MKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWGPPDD 272
+S+ VG GA + + T L ++ + + + S G +
Sbjct: 79 EWDLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEA 138
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY----------- 321
+ DG + +G F ++G+ N
Sbjct: 139 DANADGTLQAEDRIFATAAA-----QGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPAS 193
Query: 322 ------INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD--PVKIITTDVHNTC 373
+ ++ ++ + + A GG S + V T
Sbjct: 194 SPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSVVSGTP 253
Query: 374 TCEH-------------------------SGTSAAAPIAAGVLALALEANPNMTWRDCQH 408
GTS A+PI G+ A AN N
Sbjct: 254 GRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAAS 313
Query: 409 ILAWTSEREPLSH--VSGWERNARDLW-----FHSAYGFGLINTFKLVSLAKNW 455
+ S L H SG + + G+G ++ KL + ++
Sbjct: 314 FYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSN 367
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Score = 65.1 bits (157), Expect = 5e-12
Identities = 56/347 (16%), Positives = 88/347 (25%), Gaps = 62/347 (17%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
++G G I II G Y + FA + P G +
Sbjct: 20 GLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQP---TGDPNGPD 76
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL-IESKALQFGLDKVDIYSGSWGPPDDG 273
+ + + GA++ + + L + A+ K I S SWG P+D
Sbjct: 77 -GEVELDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDS 135
Query: 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG----KYNGDNCAADGYINSIYTIA 329
+ +++A +D GV + AAG+ D S Y +A
Sbjct: 136 WAPASIAAMNRAFLDAA------ALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLA 189
Query: 330 IASAREDGQSPFYSEE------------------------CTGLIATAYSGGISDPVKII 365
R + E S
Sbjct: 190 CGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSANPGAGSGRG 249
Query: 366 TTDVHNTC-------------TCEHSGTSAAAPIAAGVLALALEA--------NPNMTWR 404
DV T GTSA AP+ A ++A + NP +
Sbjct: 250 VPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQL 309
Query: 405 DCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSL 451
+ T A W G G +L+
Sbjct: 310 PPEVFHDITEGNND-IANRARIYQAGPGW-DPCTGLGSPIGIRLLQA 354
|
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Score = 54.3 bits (129), Expect = 2e-08
Identities = 55/302 (18%), Positives = 87/302 (28%), Gaps = 34/302 (11%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
+ I IID G + +H D+ + N + P N HGT AG
Sbjct: 18 DSQAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQP---GNNNAHGTHVAGT 72
Query: 215 LVMKPNNSK-CGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGP 269
+ NN GV A + VK+ + ++ L+ + ++ + S G
Sbjct: 73 IAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGG 132
Query: 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNG-------DNCAADGYI 322
+R GVL + AAGN + D+ + +
Sbjct: 133 SGS------------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAV 180
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTS- 381
+S A S D E T G ++D + N + T
Sbjct: 181 DSNLDHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPS 240
Query: 382 ----AAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
A API A E N T C ++ E + +
Sbjct: 241 GTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKT 300
Query: 438 YG 439
G
Sbjct: 301 AG 302
|
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Score = 50.1 bits (118), Expect = 4e-07
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 13/168 (7%)
Query: 292 REGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIA 351
R G QG + + K G Y NS D S + A
Sbjct: 281 RVGNQGSSYPEINSTKACKTAGAKGIIV-YSNSALPGLQNPFLVDANSDITVPSVSVDRA 339
Query: 352 TAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA 411
T + ++ N ++GTS A P +GV L +P + + L
Sbjct: 340 TGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALN 399
Query: 412 WTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVP 459
T++ V+G + G+G+IN + P
Sbjct: 400 ATADDLS---VAGRDN---------QTGYGMINAVAAKAYLDESCTGP 435
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 586 | |||
| d1r6va_ | 671 | Fervidolysin {Fervidobacterium pennivorans [TaxId: | 100.0 | |
| d1p8ja2 | 334 | Furin, N-terminal domain {Mouse (Mus musculus) [Ta | 100.0 | |
| d2id4a2 | 339 | Kexin, N-terminal domain {Baker's yeast (Saccharom | 100.0 | |
| d1dbia_ | 280 | Thermostable serine protease {Bacillus sp., AK.1 [ | 100.0 | |
| d1thma_ | 279 | Thermitase {Thermoactinomyces vulgaris [TaxId: 202 | 100.0 | |
| d1to2e_ | 281 | Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' | 100.0 | |
| d1r0re_ | 274 | Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 | 100.0 | |
| d1gcia_ | 269 | Subtilisin {Bacillus lentus [TaxId: 1467]} | 100.0 | |
| d1v6ca_ | 435 | Alkaline serine protease Apa1 {Pseudoalteromonas s | 100.0 | |
| d2ixta1 | 309 | Sphericase {Bacillus sphaericus [TaxId: 1421]} | 100.0 | |
| d2pwaa1 | 279 | Proteinase K {Fungus (Tritirachium album), strain | 100.0 | |
| d1wmda2 | 318 | Alkaline serine protease kp-43, N-terminal domain | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 99.96 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 99.95 | |
| d1p8ja1 | 136 | Furin, C-terminal domain {Mouse (Mus musculus) [Ta | 99.89 | |
| d2id4a1 | 141 | Kexin, C-terminal domain {Baker's yeast (Saccharom | 99.83 | |
| d1kn6a_ | 73 | Prohormone convertase 1 pro-domain {Mouse (Mus mus | 99.06 | |
| d1scjb_ | 71 | Subtilisin prosegment {Bacillus subtilis [TaxId: 1 | 98.17 | |
| d1v5ib1 | 72 | Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( | 97.46 | |
| d1wmda1 | 116 | Alkaline serine protease kp-43, C-terminal domain | 94.7 |
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Probab=100.00 E-value=6.8e-58 Score=512.11 Aligned_cols=389 Identities=16% Similarity=0.183 Sum_probs=294.1
Q ss_pred CCCccccceeeeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEee
Q psy5372 2 HVGVERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQ 81 (586)
Q Consensus 2 ~~~~~~~~~~~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~ 81 (586)
|......++++++|||+||++ ..++++.++++.++...+..+ +.+.++.+. .......+ ..++..+|.|++|||
T Consensus 21 ~~~~~~~~~~~~~~iV~~k~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~-~~~~~~~~~V~~vep 94 (671)
T d1r6va_ 21 FGELRDGEYTEGKILVGYNDR-SEVDKIVKAVNGKVVLELPQI-KVVSIKLNG---MTVKQAYD-KIKALALKGIRYVEP 94 (671)
T ss_dssp BCCCCTTSBCTTEEEEEESSH-HHHHHHHHHHTCEEEEEEGGG-TEEEEECSS---CCHHHHHH-HHTTSCCSSEEEEEC
T ss_pred hccccccCcCCCeEEEEECCc-cCHHHHHHhcCCEEEEEeccc-ceEEEEcCc---hhHHHHHH-HHHHhcCCCceEECc
Confidence 344566789999999999984 556788889999998888765 556665432 22211111 224556899999999
Q ss_pred cchhhccccchh-hHHHHHHhhhhhhhcchhhccccCCCCCCCCCCCCCcccccCCCCCCCCCCCCchHH-HHcCCCCCC
Q psy5372 82 QFAKHLRKRAEI-QELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPV-YQELNINGA 159 (586)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~a-w~~~~~~G~ 159 (586)
++..++...... +++. ....+..........+++|++..||+|+ .|++.++ |+ .++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~w~l~-----------~i~~~~a~~~--~~tG~ 154 (671)
T d1r6va_ 95 SYKRELIKPTVVKPNPD-------MYKIRKPGLNSTARDYGEELSNELWGLE-----------AIGVTQQLWE--EASGT 154 (671)
T ss_dssp CBCCEECCCEECCCCTT-------TTCSSSSCCSSSTTCCSSTTGGGCHHHH-----------HTTCCHHHHH--HCSCT
T ss_pred ceeEeeccccccCCCcc-------ccccccccccccccCcCccccccCcChh-----------hcCccHHHHh--cCCCC
Confidence 988766542111 0000 0001111122333447788889999995 4567665 66 67999
Q ss_pred CcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEc
Q psy5372 160 GVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239 (586)
Q Consensus 160 gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v 239 (586)
||+|||||||||++||||.+++.. ++++..++..+......+..+|||||||+|+|. +|+.++.||||+|+|+++|+
T Consensus 155 gV~VaViDtGvd~~Hpdl~~~~~~--~~~~~~~~~~~~~~~~~d~~gHGT~VAGiiaa~-~~~~g~~GvAp~a~l~~~rv 231 (671)
T d1r6va_ 155 NIIVAVVDTGVDGTHPDLEGQVIA--GYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAK-KDGKGIVGVAPGAKIMPIVI 231 (671)
T ss_dssp TCEEEEEESCCBTTSGGGTTTBCC--EEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCC-CSSSSCCCSCTTSEEEEEES
T ss_pred CCEEEEEcCCcCCCChhhcCCccc--CccccccCCCCCCCcCcccCCCCccccceeeee-ccccceeeecCcceEEEEEe
Confidence 999999999999999999998765 455554433222111116789999999999997 56779999999999999999
Q ss_pred cCC----------CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCC
Q psy5372 240 LDG----------ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG 309 (586)
Q Consensus 240 ~~~----------~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~ 309 (586)
++. ....+++++.|+.. ++++|||||||.... ...+.++++++.. +|+++|+||||+
T Consensus 232 ~~~~~~~~~~g~~~~~~i~~ai~~a~~-~g~~Vin~S~g~~~~-------~~~~~~ai~~a~~-----~gv~vV~aAGN~ 298 (671)
T d1r6va_ 232 FDDPALVGGNGYVGDDYVAAGIIWATD-HGAKVMNHSWGGWGY-------SYTMKEAFDYAME-----HGVVMVVSAGNN 298 (671)
T ss_dssp BCCHHHHCTTSBCCHHHHHHHHHHHHH-TTCSEEEECEEBSCC-------CHHHHHHHHHHHH-----TTCEEEEECCSC
T ss_pred cccccccCCCCcccHHHHHHHHHHHHh-CCCcEEecccccccC-------ChHHHHHHHHHHh-----ccCcEEEEEecC
Confidence 863 24568899999988 899999999987532 2367888888887 699999999999
Q ss_pred CCCCCCCCCCCCCCCceEEEEeeecCCC---CCCCCCCCCCcceeccccCCCCCCCceEEecC-----------------
Q psy5372 310 KYNGDNCAADGYINSIYTIAIASAREDG---QSPFYSEECTGLIATAYSGGISDPVKIITTDV----------------- 369 (586)
Q Consensus 310 g~~~~~~~~~~~~~~~~vi~Vga~~~~~---~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~----------------- 369 (586)
+.+. ....|+..+++|+|||++..+ .++.||++|+.+++. +||..|+++.+
T Consensus 299 ~~~~---~~~~Pa~~~~vi~Vga~~~~~~~~~~a~fS~~g~~~dv~------APG~~i~st~~~~~~~~~~~~~~~~~~~ 369 (671)
T d1r6va_ 299 TSDS---HHQYPAGYPGVIQVAALDYYGGTFRVAGFSSRSDGVSVG------APGVTILSTVPGEDSIGYEGHNENVPAT 369 (671)
T ss_dssp SSSC---CCCBTTTSTTCEEEEEEEEETTEEEECSSSCCCTTEEEE------EECSSEEEECCCTTSTTCCCCCTTCCCS
T ss_pred CCCc---cccCCccCCceEEEEEecCCCCcceeeeccCCCCCceEE------ecCCCeEeecCCCCcccccccccccccc
Confidence 8742 335678889999999999776 578999999998874 47888888743
Q ss_pred CCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHH
Q psy5372 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLV 449 (586)
Q Consensus 370 ~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av 449 (586)
.+++|..++|||||||||||++|||++++|+|+++|||++|+.||++.+... ++..||||+||+.+||
T Consensus 370 ~~~~y~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~g------------~~~~~G~G~vna~~Av 437 (671)
T d1r6va_ 370 NGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDTGYGLVKLDAAL 437 (671)
T ss_dssp SSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTTBTCBCCHHHHH
T ss_pred CCCeeeeecCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC------------CCCCcccChhCHHHHh
Confidence 2456889999999999999999999999999999999999999999875432 5789999999999999
Q ss_pred HHHh
Q psy5372 450 SLAK 453 (586)
Q Consensus 450 ~~a~ 453 (586)
+.+.
T Consensus 438 ~~~~ 441 (671)
T d1r6va_ 438 QGPL 441 (671)
T ss_dssp HCCC
T ss_pred hCcC
Confidence 8643
|
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Furin, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.4e-57 Score=467.29 Aligned_cols=329 Identities=45% Similarity=0.839 Sum_probs=276.3
Q ss_pred CCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCC
Q psy5372 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITP 198 (586)
Q Consensus 119 ~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~ 198 (586)
.|+||+|++||||+++.+ .+||++++|+ .+++|+||+|||||+||+.+||||.+++.....+++.+.+..+.+
T Consensus 4 ~p~dp~~~~qw~l~~~~~------~~in~~~aw~-~g~~G~gv~VaViDtGv~~~Hpdl~~~~~~~~~~~~~~~~~~~~~ 76 (334)
T d1p8ja2 4 EPTDPKFPQQWYLSGVTQ------RDLNVKEAWA-QGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQP 76 (334)
T ss_dssp CCCCTTGGGCTTTSCTTS------CSCCCHHHHH-TTCSCTTCEEEEEEBCCCTTCTTTGGGBCGGGCEETTTTBSCCCC
T ss_pred CCCCCCchhcCCCCCCcc------cCCCHHHHHh-cCCCCCCeEEEEEccCCCCCChhHhhccccCCCccccCCCCcccc
Confidence 399999999999988764 7899999999 999999999999999999999999999887666666655544443
Q ss_pred CCCC-CCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCCchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCC
Q psy5372 199 RYED-PRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD 277 (586)
Q Consensus 199 ~~~~-d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~ 277 (586)
.... +..+|||||||+|++..+|+.+..|+||+++++.++++++...+.++++.+.+..++++++|||||.........
T Consensus 77 ~~~~~~~~gHGT~vAgiia~~~~n~~~~~g~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~S~g~~~~~~~~~ 156 (334)
T d1p8ja2 77 RYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVD 156 (334)
T ss_dssp CCCTTCTTCHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECSSSCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCB
T ss_pred ccccccCccchhhhhhhhhhccccccccccccccccccchhhccccccchHHHHHHHhhhcCCcEEeCCCCCCCcCcccC
Confidence 3322 778999999999999989999999999999999999999888888899999888789999999999876655555
Q ss_pred CchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCC
Q psy5372 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG 357 (586)
Q Consensus 278 ~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~ 357 (586)
.+.....+.+..+.......+|+++|+||||++...+......+...+.+++|++++..+.+..|++.|.......++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~g~lvV~AaGN~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~s~~~~~~~~~~~~~~ 236 (334)
T d1p8ja2 157 GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSG 236 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTTSCCCTTCCBCTTCCEEEECCC
T ss_pred CccchhhHHHHHHHHHHHhcCCceEEEecCCCCccCCCCCccccccccccccccccccCCceeeecccCCcccccccccc
Confidence 55443333333332222223799999999999887666666777778899999999999999999999988877666654
Q ss_pred CC-CCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCC
Q psy5372 358 IS-DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS 436 (586)
Q Consensus 358 ~a-pg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~ 436 (586)
.. ....+.+. ..+.+|..++|||||||+|||++|||+|++|+|+++|||++|+.||++..... .+|..++.+..+++
T Consensus 237 ~~~~~~~~~~~-~~~~~~~~~sGTS~AaP~VaG~aALl~s~~p~lt~~~v~~~L~~TA~~~~~~~-~~~~~~~~~~~~~~ 314 (334)
T d1p8ja2 237 NQNEKQIVTTD-LRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA-DDWATNGVGRKVSH 314 (334)
T ss_dssp STTSCCEEEEE-TTTEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC-SCCEECTTSCEEBT
T ss_pred ccccccccccc-cCCccccCCCCccccchHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccCCCC-ccccccCCCcccCC
Confidence 32 23334444 56778899999999999999999999999999999999999999999988777 78999999999999
Q ss_pred cccccccCHHHHHHHHhccC
Q psy5372 437 AYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 437 ~~G~G~vna~~Av~~a~~~~ 456 (586)
.||||+||+.+||++||+|+
T Consensus 315 ~~G~G~lna~~Av~~a~~~~ 334 (334)
T d1p8ja2 315 SYGYGLLDAGAMVALAQNWT 334 (334)
T ss_dssp TTBTCBCCHHHHHHHHHTCC
T ss_pred CCcceEeCHHHHHHHHHhcC
Confidence 99999999999999999995
|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Kexin, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.3e-56 Score=460.20 Aligned_cols=328 Identities=43% Similarity=0.768 Sum_probs=278.4
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 118 GMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 118 ~~~~dp~~~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
..+|||+|++||||++.++ ++.+||+.++|+ .+++|+||+|+||||||+++||+|++++....+++|.++..+..
T Consensus 10 ~~~~dp~~~~qw~l~~~~~----~~~din~~~aw~-~g~~G~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~ 84 (339)
T d2id4a2 10 LSINDPLFERQWHLVNPSF----PGSDINVLDLWY-NNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPK 84 (339)
T ss_dssp TTCCCTTGGGCTTTSCSSS----TTCSCCCHHHHH-TTCSCTTCEEEEEESCCCTTSTTTTTTBCGGGCEETTTTBSCCC
T ss_pred CCCCCCChhhccCCCCCCC----CccccCHHHHHh-cCCCCCCcEEEEECcCcCCCChHHhcCcccccccccccCCCccC
Confidence 3489999999999998875 578999999999 99999999999999999999999999988877888887765544
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC--chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE--TTDLIESKALQFGLDKVDIYSGSWGPPDDGKS 275 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~--~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~ 275 (586)
+.. +..+||||||++|++..+++.++.||||+|+|+.+++.++. ......++.+ .....+|+|+|||.......
T Consensus 85 ~~~--~~~~HGT~vag~iaa~~~~~~~~~Gvap~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~s~g~~~~~~~ 160 (339)
T d2id4a2 85 PRL--SDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIY--GLDVNDIYSCSWGPADDGRH 160 (339)
T ss_dssp CCS--TTTTHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECTTSCCCHHHHHHHTTT--TTTTCSEEEECEESCCSSSC
T ss_pred CCc--ccccccceeeecccccccccccccccccccccceEEEeeccccchHHHHHHHH--HHhhCCEEeccCCCCCCccc
Confidence 332 67899999999999998888899999999999999998765 4444444443 33567999999998766555
Q ss_pred CCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecccc
Q psy5372 276 MDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYS 355 (586)
Q Consensus 276 ~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~ 355 (586)
..........++...+...+..+|+++|+||||++...+...++.+...+.+++|++++..+..+.+++.|+......+.
T Consensus 161 ~~~~~~~~~~a~~~~~~~~~~~~g~i~v~AaGN~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~~~ 240 (339)
T d2id4a2 161 LQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYS 240 (339)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTTSCCCTTCCCCTTEEEEEEC
T ss_pred ccCccchhHHHHHHHHHHHHhcCCcEEEecccCCccCCCccccccccccccccccccccccccccccccccCccceeeee
Confidence 55555555555555544444458999999999998876666677777788999999999999999999999877655433
Q ss_pred CCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccC
Q psy5372 356 GGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFH 435 (586)
Q Consensus 356 ~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~ 435 (586)
..++..+.++...+.+|..++|||||||+|||++|||+|++|+||++|||.+|+.||++++......|..+..+..++
T Consensus 241 --~~~g~~~~s~~~~~~~~~~~sGTS~AtP~vaG~aALv~~~~P~lt~~~i~~~l~~tA~~~~~~~~~~~~~~~~~~~~~ 318 (339)
T d2id4a2 241 --SGSGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYS 318 (339)
T ss_dssp --SBTTBCEEEECSTTCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEB
T ss_pred --eccccccceeccCCCccccCCCCcchHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCCCCCccccccCCCCCcC
Confidence 447888888877888899999999999999999999999999999999999999999998776667899999999999
Q ss_pred CcccccccCHHHHHHHHhccC
Q psy5372 436 SAYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 436 ~~~G~G~vna~~Av~~a~~~~ 456 (586)
..||||+||+.+||++|++|+
T Consensus 319 ~~~G~G~ln~~~Av~~a~~~~ 339 (339)
T d2id4a2 319 HRYGFGKIDAHKLIEMSKTWE 339 (339)
T ss_dssp TTTBTCBCCHHHHHHHHTSCC
T ss_pred CCccchhhCHHHHHHHHHcCC
Confidence 999999999999999999995
|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermostable serine protease species: Bacillus sp., AK.1 [TaxId: 1409]
Probab=100.00 E-value=1.4e-52 Score=422.02 Aligned_cols=273 Identities=22% Similarity=0.281 Sum_probs=230.3
Q ss_pred CCCCCCCC-CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 119 MFTDEWWP-MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 119 ~~~dp~~~-~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
.|+||+|. +||+| .+|++++||+ ++++|+||+|+|||+||+.+||+|.+++.. ++++...+..+.
T Consensus 2 tp~dp~~~~~qw~l-----------~~i~~~~aw~-~~~~G~gv~VaviDsGi~~~h~~l~~~~~~--~~~~~~~~~~~~ 67 (280)
T d1dbia_ 2 TPNDTYYQGYQYGP-----------QNTYTDYAWD-VTKGSSGQEIAVIDTGVDYTHPDLDGKVIK--GYDFVDNDYDPM 67 (280)
T ss_dssp CCCCTTHHHHCCTT-----------GGGTHHHHTT-TCCCCTTCEEEEEESCCCTTSTTTTTTEEE--EEETTTTBSCCC
T ss_pred CCCCcCcCccccCh-----------hhCCHHHHHh-ccCCCCCeEEEEEccCcCCCChhhcCCeee--cccccCCCCccc
Confidence 48999997 69999 6789999999 999999999999999999999999987654 566666554443
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDG 273 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~ 273 (586)
|..+|||||||+|++..+++.++.||||+|+|+++|+++. ..++++++++++.. ++++|||||||....
T Consensus 68 -----d~~~HGT~vag~i~~~~~~~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~-~g~~iin~S~g~~~~- 140 (280)
T d1dbia_ 68 -----DLNNHGTHVAGIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAAD-SGAEVINLSLGCDCH- 140 (280)
T ss_dssp -----CSSSHHHHHHHHHHCCCSSSSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHH-TTCSEEEECCSSCCC-
T ss_pred -----cccccccceeEeeeccccCCCceeEEeccCEEEEEEEeCCCCCcCHHHHHHHHHHHHH-cCCcEeecccccccc-
Confidence 7889999999999999888888999999999999999864 47889999999988 899999999997542
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecc
Q psy5372 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATA 353 (586)
Q Consensus 274 ~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~ 353 (586)
.....+++..+.+ +|+++|+||||++.. ....|+..+++|+|||++..++++.||++|+.+++.
T Consensus 141 ------~~~~~~a~~~a~~-----~gilvv~aaGn~g~~----~~~~Pa~~~~vi~Vga~~~~~~~a~~S~~g~~~d~~- 204 (280)
T d1dbia_ 141 ------TTTLENAVNYAWN-----KGSVVVAAAGNNGSS----TTFEPASYENVIAVGAVDQYDRLASFSNYGTWVDVV- 204 (280)
T ss_dssp ------CHHHHHHHHHHHH-----TTCEEEEECCBC-------------CCTTSEEEEEECTTSCBCTTBCCSTTCCEE-
T ss_pred ------chhHHHHHHHHHH-----CCEEEEEecCccCCC----CccCCCCCCCEEEEeeecCCCCcCCcCCCCCccccc-
Confidence 2356778888877 699999999999864 234567889999999999999999999999988774
Q ss_pred ccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcc
Q psy5372 354 YSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433 (586)
Q Consensus 354 ~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~ 433 (586)
+||..|++.. .+.+|..++|||||||+|||++|||++. .+++.|||++|+.||++...
T Consensus 205 -----apg~~i~~~~-~~~~~~~~sGTS~AaP~vaG~~All~~~--~~t~~~v~~~L~~tA~~~~~-------------- 262 (280)
T d1dbia_ 205 -----APGVDIVSTI-TGNRYAYMSGTSMASPHVAGLAALLASQ--GRNNIEIRQAIEQTADKISG-------------- 262 (280)
T ss_dssp -----EECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHTSBCCTT--------------
T ss_pred -----CCccceeccc-cCcceeccCCccccchHHHHHHHHHhCC--CcCHHHHHHHHHHhCcCCCC--------------
Confidence 4888898885 5677899999999999999999999995 56899999999999987642
Q ss_pred cCCcccccccCHHHHHH
Q psy5372 434 FHSAYGFGLINTFKLVS 450 (586)
Q Consensus 434 ~~~~~G~G~vna~~Av~ 450 (586)
.+..||||+||+++||+
T Consensus 263 ~~~~~G~G~ln~~~Al~ 279 (280)
T d1dbia_ 263 TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp BTTTBSSEECCHHHHHT
T ss_pred CCCcCCCCeEcHHHHcC
Confidence 25678999999999984
|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermitase species: Thermoactinomyces vulgaris [TaxId: 2026]
Probab=100.00 E-value=7.8e-52 Score=416.61 Aligned_cols=272 Identities=22% Similarity=0.265 Sum_probs=233.9
Q ss_pred CCCCCCC-CCCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCC
Q psy5372 119 MFTDEWW-PMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDIT 197 (586)
Q Consensus 119 ~~~dp~~-~~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~ 197 (586)
.|+||+| ++||+| ..|++++||+ .+ +|+||+|+|||+||+.+||+|.+++.. ++++.+++.+|.
T Consensus 2 ~p~dp~~~~~~w~l-----------~~i~a~~aw~-~~-tG~Gv~VaViDsGi~~~H~~~~~~~~~--~~~~~~~~~~~~ 66 (279)
T d1thma_ 2 TPNDPYFSSRQYGP-----------QKIQAPQAWD-IA-EGSGAKIAIVDTGVQSNHPDLAGKVVG--GWDFVDNDSTPQ 66 (279)
T ss_dssp CCCCTTHHHHCCHH-----------HHTTHHHHHT-TC-CCTTCEEEEEESCCCTTCTTTTTTEEE--EEETTTTBSCCC
T ss_pred CCCCCCcccCCcCh-----------hhCCHHHHHh-cc-CCCCcEEEEEcCCCCCCChhhcCCeec--cccccccCcccc
Confidence 4999998 567878 5688999999 77 999999999999999999999988654 577777666554
Q ss_pred CCCCCCCCChHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCC
Q psy5372 198 PRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDG 273 (586)
Q Consensus 198 ~~~~~d~~~HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~ 273 (586)
|..+|||||||+|++..+++.++.||||+|+|+++|++.. ...++++++.++.. .+++|+|||||....
T Consensus 67 -----d~~~HGT~vag~i~~~~~~~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~-~~~~i~n~S~G~~~~- 139 (279)
T d1thma_ 67 -----NGNGHGTHCAGIAAAVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAAD-QGAKVISLSLGGTVG- 139 (279)
T ss_dssp -----CSSSHHHHHHHHHHCCCSSSSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH-TTCSEEEECCCBSSC-
T ss_pred -----cccccccccceeeeeccCCCccccccCCcceEEEEEEEecCCCCcHHHHHHHHHHHhh-cCCceeccccCcccc-
Confidence 7789999999999999888889999999999999999853 47788899999887 889999999997543
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceecc
Q psy5372 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATA 353 (586)
Q Consensus 274 ~~~~~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~ 353 (586)
.....+++..+.+ +|+++|+|+||+|... ...++..+++|+|||++.++.++.||++|+.+++.
T Consensus 140 ------~~~~~~a~~~a~~-----~~~~~v~aagn~g~~~----~~~~~~~~~vi~Vga~~~~~~~~~~S~~G~~~di~- 203 (279)
T d1thma_ 140 ------NSGLQQAVNYAWN-----KGSVVVAAAGNAGNTA----PNYPAYYSNAIAVASTDQNDNKSSFSTYGSWVDVA- 203 (279)
T ss_dssp ------CHHHHHHHHHHHH-----TTCEEEEECCSSSSCC----CCBTTTSTTEEEEEEECTTSCBCTTCCCCTTCCEE-
T ss_pred ------chhHHHHHHHHHh-----cCceEEEeccccccCC----CccccccccccccccccCCCCCccccCCCceEEEe-
Confidence 2356778888777 6999999999998752 24566778999999999999999999999988774
Q ss_pred ccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcc
Q psy5372 354 YSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433 (586)
Q Consensus 354 ~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~ 433 (586)
+||..|+++. .++.|..++|||||||+|||++|||++.+| ++.+||++|+.||++.+.
T Consensus 204 -----Apg~~i~~~~-~~~~~~~~sGTS~AaP~vaG~~ALl~~~~~--s~~~i~~~L~~tA~~~~g-------------- 261 (279)
T d1thma_ 204 -----APGSSIYSTY-PTSTYASLSGTSMATPHVAGVAGLLASQGR--SASNIRAAIENTADKISG-------------- 261 (279)
T ss_dssp -----EECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHTTTC--CHHHHHHHHHHTCBCCTT--------------
T ss_pred -----eeeecccccc-CcccccccCCcchhhHHHHHHHHHHhcCCc--CHHHHHHHHHhhCccCCC--------------
Confidence 4888898885 566789999999999999999999999765 899999999999988642
Q ss_pred cCCcccccccCHHHHHH
Q psy5372 434 FHSAYGFGLINTFKLVS 450 (586)
Q Consensus 434 ~~~~~G~G~vna~~Av~ 450 (586)
.+..||||+||+.+||+
T Consensus 262 ~~~~~G~G~vn~~~Av~ 278 (279)
T d1thma_ 262 TGTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp BTTTBSSEECCHHHHHH
T ss_pred CCCcceeeeEcHHHhhC
Confidence 25678999999999996
|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
Probab=100.00 E-value=4.6e-51 Score=411.40 Aligned_cols=267 Identities=26% Similarity=0.291 Sum_probs=228.9
Q ss_pred CCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCC
Q psy5372 143 LDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNS 222 (586)
Q Consensus 143 ~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~ 222 (586)
..|+++.+|+ .+++|+||+|+|||+||+.+||+|+.. .++++...+.++.. +..+|||||||+|++. +++
T Consensus 9 ~~i~a~~aw~-~g~tG~Gv~IaviDtGv~~~Hp~l~~~----~~~~~~~~~~~~~~----~~~~HGT~vAgiiag~-~~~ 78 (281)
T d1to2e_ 9 SQIKAPALHS-QGYTGSNVKVAVIDSGIDSSHPDLKVA----GGASMVPSETNPFQ----DNNSHGTHVAGTVAAL-NNS 78 (281)
T ss_dssp HHTTHHHHHH-HTCSCTTCEEEEEESCCCTTCTTCCEE----EEEECCTTCCCTTC----CSSSHHHHHHHHHHCC-SSS
T ss_pred HHhCcHHHHH-CCCCCCCeEEEEECCCCCCCChhhhhc----CCccccCCCCCCCc----CcCCCCceeecccccC-CCC
Confidence 6789999999 999999999999999999999999653 24566655554431 4679999999999997 677
Q ss_pred CcceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCC
Q psy5372 223 KCGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298 (586)
Q Consensus 223 ~g~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~ 298 (586)
.+..||||+|+|+++|+++. ...+++++++|+.. .+++|+|+|||.... ...+.++++++.. +
T Consensus 79 ~~~~giAp~a~l~~~kv~~~~~~~~~~~~~~ai~~a~~-~~~~v~n~S~g~~~~-------~~~~~~ai~~~~~-----~ 145 (281)
T d1to2e_ 79 IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIA-NNMDVINMSLGGPSG-------SAALKAAVDKAVA-----S 145 (281)
T ss_dssp SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHH-TTCSEEEECEEBSCC-------CHHHHHHHHHHHH-----T
T ss_pred CCcceeecccEEEEEEEeCCCCCcCHHHHHHHHHHHHh-ccccccccccCCCcc-------hHHHHHHHHHHHh-----c
Confidence 78899999999999999864 36778899999987 789999999997542 2367788888777 6
Q ss_pred CcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCCceEEecCCCCeeeccC
Q psy5372 299 GVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHS 378 (586)
Q Consensus 299 Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~ 378 (586)
|+++|+||||++...+......|+..+++|+||+++.++.++.||++|+.+++. +||..|.++. .++.|..++
T Consensus 146 gil~V~aAGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~S~~G~~~d~~------apG~~i~s~~-~~~~~~~~~ 218 (281)
T d1to2e_ 146 GVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPELDVM------APGVSIQSTL-PGNKYGAYN 218 (281)
T ss_dssp TCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTTSCBCTTCCCSTTCCEE------EECSSEEEEE-TTTEEEEEC
T ss_pred CCcceecccCcccCCCCCCccCCCCCCceEEEEeecCCCCCCcccCCCCCcccc------CCCCCceeec-CCCeeEccc
Confidence 999999999999876666666788889999999999999999999999988774 4888999885 566788999
Q ss_pred CCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhc
Q psy5372 379 GTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKN 454 (586)
Q Consensus 379 GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~ 454 (586)
|||||||+|||++|||++++|.|+++|||++|+.||++... +..||||+||+.+||+.++.
T Consensus 219 GTS~Aap~vaG~~All~~~~p~lt~~~i~~~L~~tA~~~~~---------------~~~~G~G~ld~~~A~~~~~~ 279 (281)
T d1to2e_ 219 GTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGD---------------SFYYGKGLINVQAAAQHHHH 279 (281)
T ss_dssp BHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCSC---------------HHHHTTCBCCHHHHTSSSCC
T ss_pred CcchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC---------------CCCcccCcccHHHHHhhHHh
Confidence 99999999999999999999999999999999999997642 45789999999999986653
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus subtilis, carlsberg [TaxId: 1423]
Probab=100.00 E-value=4.3e-50 Score=402.81 Aligned_cols=267 Identities=23% Similarity=0.267 Sum_probs=227.8
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
-||+| ..|+++++|+ .+++|+||+|+|||+||+.+||+|+. ..+++|..++..+. |.++
T Consensus 4 ~~wgl-----------~~i~~~~~~~-~g~tG~gv~VaViDtGv~~~Hp~l~~----~~~~~~~~~~~~~~-----d~~g 62 (274)
T d1r0re_ 4 VPYGI-----------PLIKADKVQA-QGFKGANVKVAVLDTGIQASHPDLNV----VGGASFVAGEAYNT-----DGNG 62 (274)
T ss_dssp CCTHH-----------HHTTHHHHHH-HTCSCTTCEEEEEESCCCTTCTTCCE----EEEEECSTTCCTTC-----CSSS
T ss_pred CCcch-----------hhcChHHHHH-cCCCCCCeEEEEECCCCCCCChhhcc----cCCccccCCCCCCC-----Cccc
Confidence 37999 4578999999 99999999999999999999999953 23567776655443 7889
Q ss_pred hHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHH
Q psy5372 207 HGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKL 282 (586)
Q Consensus 207 HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~ 282 (586)
|||||||+|++. +++.++.||||+|+|+.+++++.. .++++++++++.. ++++|+|+||+..... ..
T Consensus 63 HGT~vAgii~~~-~~~~~~~gvap~a~i~~~~~~~~~~~~~~~~i~~ai~~a~~-~~~~i~n~S~~~~~~~-------~~ 133 (274)
T d1r0re_ 63 HGTHVAGTVAAL-DNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATT-NGMDVINMSLGGASGS-------TA 133 (274)
T ss_dssp HHHHHHHHHHCC-SSSSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHH-TTCSEEEECEEBSSCC-------HH
T ss_pred cccccccccccc-cccccccccCCCcEEEEEEEeCCCCCcCHHHHHHHHHHHHh-cCCceeccccccccch-------hh
Confidence 999999999987 566688999999999999998753 6788999999887 8999999999975432 25
Q ss_pred HHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCC
Q psy5372 283 SKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362 (586)
Q Consensus 283 ~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~ 362 (586)
....+.++.+ +++++|+||||++..........|+..+++|+|||++.++.++.||++|+..++. +||.
T Consensus 134 ~~~~~~~a~~-----~~~l~V~aaGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~di~------APG~ 202 (274)
T d1r0re_ 134 MKQAVDNAYA-----RGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVM------APGA 202 (274)
T ss_dssp HHHHHHHHHH-----TTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTTSCBCTTCCCSTTEEEE------EECS
T ss_pred hhHHHHHHhh-----CceEEEeeccCCCCCCCcccccccccCCCEEEEEeECCCCCcccccCCCCCEEEE------ecCC
Confidence 5667777776 6999999999999865555556678889999999999999999999999988874 4888
Q ss_pred ceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccc
Q psy5372 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGL 442 (586)
Q Consensus 363 ~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~ 442 (586)
.++++. ..+.|..++|||||||+|||++|||++++|+|+++|||++|+.||++... +..||||+
T Consensus 203 ~i~~~~-~~~~~~~~sGTS~AaP~VaG~~All~~~~p~lt~~~i~~~L~~tA~~~~~---------------~~~~G~G~ 266 (274)
T d1r0re_ 203 GVYSTY-PTNTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLGS---------------SFYYGKGL 266 (274)
T ss_dssp SEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCSC---------------HHHHTTCB
T ss_pred Cccccc-CCCCeEeecCCchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC---------------CCceEcCe
Confidence 999885 45678899999999999999999999999999999999999999987632 46799999
Q ss_pred cCHHHHHH
Q psy5372 443 INTFKLVS 450 (586)
Q Consensus 443 vna~~Av~ 450 (586)
||+.+|||
T Consensus 267 ln~~~A~~ 274 (274)
T d1r0re_ 267 INVEAAAQ 274 (274)
T ss_dssp CCHHHHTC
T ss_pred ecHHHhcC
Confidence 99999984
|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus lentus [TaxId: 1467]
Probab=100.00 E-value=4.3e-49 Score=394.38 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=222.0
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
.+|+| ..|+++++|+ ++++|+||+|+|||+||+ +||||..+ .+++|...+.++. |.++
T Consensus 4 ~~w~l-----------~~i~~~~aw~-~g~tG~gv~V~ViDsGv~-~h~~l~~~----~~~~~~~~~~~~~-----d~~~ 61 (269)
T d1gcia_ 4 VPWGI-----------SRVQAPAAHN-RGLTGSGVKVAVLDTGIS-THPDLNIR----GGASFVPGEPSTQ-----DGNG 61 (269)
T ss_dssp CCHHH-----------HHTTHHHHHH-TTCSCTTCEEEEEESCCC-CCTTCCEE----EEEECSTTCCSCS-----CSSS
T ss_pred CCcch-----------hHhCcHHHHh-CCCCCCCeEEEEECCCCC-CCcccCcc----ccccccCCCCCcc-----ccch
Confidence 46999 5688999999 999999999999999997 89999643 3566766555443 7789
Q ss_pred hHHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHH
Q psy5372 207 HGTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKL 282 (586)
Q Consensus 207 HGT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~ 282 (586)
|||||||+|++. .+..++.|+||+|+|+++|+++.. ...+.++++++.. ++++++|+|||.... ...
T Consensus 62 HGT~vAgii~~~-~~~~~~~giap~a~i~~~~v~~~~~~~~~~~~~~ai~~~~~-~~~~~in~s~g~~~~-------~~~ 132 (269)
T d1gcia_ 62 HGTHVAGTIAAL-NNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGN-NGMHVANLSLGSPSP-------SAT 132 (269)
T ss_dssp HHHHHHHHHHCC-CSSSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHH-TTCSEEEECCCBSSC-------CHH
T ss_pred hhheeccccccc-CCCccccccCCceEEEEEEEecCCCCccHHHHHHHHHHHHh-ccccccccccccccc-------cch
Confidence 999999999987 455678899999999999998643 5678889998877 789999999997542 235
Q ss_pred HHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCCCCCCC
Q psy5372 283 SKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPV 362 (586)
Q Consensus 283 ~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~~apg~ 362 (586)
..+++.++.+ +|+++|+||||++.. ....|+..+++|+||+++.++.++.||++|+.+++. +|+.
T Consensus 133 ~~~a~~~a~~-----~gilvv~AaGN~g~~----~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~di~------Apg~ 197 (269)
T d1gcia_ 133 LEQAVNSATS-----RGVLVVAASGNSGAG----SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIV------APGV 197 (269)
T ss_dssp HHHHHHHHHH-----TTCEEEEECCSSCCS----SCCBTTTSTTEEEEEEECTTSCBCTTCCCSTTEEEE------EECS
T ss_pred HHHHHHhhcc-----CceEEEeccCCCCCC----CccCccccCCceEEEEEccCCCcccccCCCCCceEE------Eeee
Confidence 6777787777 699999999999874 234567889999999999999999999999998874 4778
Q ss_pred ceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccc
Q psy5372 363 KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGL 442 (586)
Q Consensus 363 ~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~ 442 (586)
.+.++. .+..|..++|||||||+|||++|||++++|+|+++|||++|++||++.+. +..||||+
T Consensus 198 ~~~~~~-~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~~~L~~tA~~~g~---------------~~~~G~G~ 261 (269)
T d1gcia_ 198 NVQSTY-PGSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLGS---------------TNLYGSGL 261 (269)
T ss_dssp SEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCSC---------------HHHHTTCB
T ss_pred cceecc-CCCceEecCCcchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC---------------CCCcccCe
Confidence 888774 56778999999999999999999999999999999999999999987642 45789999
Q ss_pred cCHHHHHH
Q psy5372 443 INTFKLVS 450 (586)
Q Consensus 443 vna~~Av~ 450 (586)
||+++||+
T Consensus 262 ln~~~Avk 269 (269)
T d1gcia_ 262 VNAEAATR 269 (269)
T ss_dssp CCHHHHTC
T ss_pred EcHHHhcC
Confidence 99999984
|
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Probab=100.00 E-value=8.5e-47 Score=403.49 Aligned_cols=282 Identities=19% Similarity=0.221 Sum_probs=215.7
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
.||.+ ..|++..+|+ .+|+||+|||||||||++||||++++.. ++++........|. |.+|
T Consensus 4 ~~wg~-----------~~i~a~~~~~---~~G~gv~VaviDtGid~~Hp~~~~~~~~--~~~~~~~~~~~~~~---d~~g 64 (435)
T d1v6ca_ 4 TPWGQ-----------TFVGATVLSD---SQAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQPG---NNNA 64 (435)
T ss_dssp CCHHH-----------HHTTGGGSCC---TTGGGCEEEEEESCCCTTSTTTTTSEEE--ECCCTTSCCTTCCC---SSCC
T ss_pred CCccH-----------hhcCcchhhh---cCCCCcEEEEEcCCCCCCChhhccCeee--eeccCCCCCCCCCC---CCCC
Confidence 47888 4466788888 4899999999999999999999987644 34443322221111 7889
Q ss_pred hHHHHHHHHhccCCCCCcceeeec--CcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCch
Q psy5372 207 HGTRCAGELVMKPNNSKCGVGVCY--GARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPG 280 (586)
Q Consensus 207 HGT~vAgiia~~~~n~~g~~GVAp--~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~ 280 (586)
|||||||||+|.. ++.++.|||| +++|+.+|++.. ...+++++++++...++++|||+|||.... .
T Consensus 65 HGThvAgiiag~~-~~~g~~GvAp~~~~~l~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~vin~S~g~~~~-------~ 136 (435)
T d1v6ca_ 65 HGTHVAGTIAAIA-NNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGS-------T 136 (435)
T ss_dssp HHHHHHHHHHCCC-SSSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCBSCC-------B
T ss_pred cHHHHHHHHhccC-CCCceEEEecccCceeeeeecccccccchhhhhhhHHHHHhhcccceEEecccCCCCC-------C
Confidence 9999999999985 5568999999 899999999753 366788999999877899999999997532 3
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCC---
Q psy5372 281 KLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG--- 357 (586)
Q Consensus 281 ~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~--- 357 (586)
..+.++++++.+ +|+++|+||||+|.. ....|+..+++|+||+++.++.+..||++|+.+++.+++..
T Consensus 137 ~~~~~a~~~~~~-----~g~~~v~aaGN~g~~----~~~~p~~~~~vi~Vga~~~~~~~~~~s~~g~~vdv~apG~~i~s 207 (435)
T d1v6ca_ 137 TTERNALNTHYN-----NGVLLIAAAGNAGDS----SYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILS 207 (435)
T ss_dssp HHHHHHHHHHHH-----TTCEEEEECCSSSSS----BCCBTTTSTTEEEEEEECTTCCBCTTSCCCSSEEEEEECSSEEE
T ss_pred HHHHhhhhhccc-----cceEEEEeccCCCCC----CcccCccCCCceEEEEecCCCCcccccCCCCceEEeecccceee
Confidence 367788888877 699999999999874 23446788999999999999999999999887654332100
Q ss_pred --------------------------------------------------------------------------------
Q psy5372 358 -------------------------------------------------------------------------------- 357 (586)
Q Consensus 358 -------------------------------------------------------------------------------- 357 (586)
T Consensus 208 t~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (435)
T d1v6ca_ 208 TVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGS 287 (435)
T ss_dssp ECSTTCEEEEEEEETTEECGGGCCEECEEEEECSSSEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSS
T ss_pred eeecCCCcccccccCCceeeccccccccccccccccccccceeccccceEEEEecCCceeeccccccccceeeccCCccc
Confidence
Q ss_pred ------------------------------------------CCCCCceEE----------------ecCCCCeeeccCC
Q psy5372 358 ------------------------------------------ISDPVKIIT----------------TDVHNTCTCEHSG 379 (586)
Q Consensus 358 ------------------------------------------~apg~~i~s----------------t~~~~~~~~~~~G 379 (586)
.+|+..+.+ ....+..|..++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~aPg~~i~~a~g~~~~~~~~~~~~~~~~~~~~y~~~sG 367 (435)
T d1v6ca_ 288 SYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNG 367 (435)
T ss_dssp SCTHHHHHHHHHHTTCSEEEEECCSSSCSCCCCEEECTTCCCCSCEEEECHHHHHHHGGGTTSEEEEEEEEEESEEEECS
T ss_pred cceeeeeceeecccCCcceEEeccCCCCCcCCccccccCCceEEEEEEeccccccccccccCCcceecCCCCCCeeEEcc
Confidence 000000000 0000123566799
Q ss_pred CCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCcccccccCHHHHHHHHhccC
Q psy5372 380 TSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWV 456 (586)
Q Consensus 380 TS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~~~ 456 (586)
||||||||||++|||+|++|+|+++|||++|++||++++... ++..+|+|+||+.+|+...+.-.
T Consensus 368 TSMAaP~VAG~aALl~q~~P~~s~~~vk~~L~~TA~~~~~~~------------~~~~~G~G~vn~~~A~~~l~~~~ 432 (435)
T d1v6ca_ 368 TSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAKAYLDESC 432 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcccCCCC------------CCCCcccceecHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999875432 46789999999999998776543
|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Sphericase species: Bacillus sphaericus [TaxId: 1421]
Probab=100.00 E-value=1.6e-43 Score=360.66 Aligned_cols=283 Identities=22% Similarity=0.234 Sum_probs=213.1
Q ss_pred CCCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q psy5372 127 MQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNK 206 (586)
Q Consensus 127 ~qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 206 (586)
.+|+| ..|++.++|+ .+++|+||+|+|||+||+++||+|.+++.. .++|......+.+... +..+
T Consensus 6 ~~wgl-----------~~i~~~~aw~-~~~~G~gv~V~ViDsGv~~~Hp~~~~~~~~--~~~~~~~~~~~~~~~~-d~~g 70 (309)
T d2ixta1 6 IPWGI-----------KAIYNNDTLT-STTGGSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPINNSCT-DRNG 70 (309)
T ss_dssp SCHHH-----------HHHHTCTTCC-CCCCCTTCEEEEEESCCCTTCTTTTTTEEE--EEESSSSSSCEETCCC-CSSS
T ss_pred CChhH-----------hhcCChhhhc-cCCCCCCeEEEEEccCCCCCChhHhccccc--cccccCCCCCCCCCcc-cccc
Confidence 37999 5678899999 999999999999999999999999987654 4566554433322221 6789
Q ss_pred hHHHHHHHHhccC-CCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcC----CCCeEEEcCCCCCCCCCCCC
Q psy5372 207 HGTRCAGELVMKP-NNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGL----DKVDIYSGSWGPPDDGKSMD 277 (586)
Q Consensus 207 HGT~vAgiia~~~-~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~----~~~~Vin~S~G~~~~~~~~~ 277 (586)
|||||||+|+|.. ++..++.||||+|+|+.+++++.. .++++.++.++... ....|+|+||+....
T Consensus 71 HGT~VAgiiaa~~~~~~~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~s~~~~~~----- 145 (309)
T d2ixta1 71 HGTHVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSAN----- 145 (309)
T ss_dssp HHHHHHHHHHCBCCTTSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSSC-----
T ss_pred ccccccccccccccccchhhhhhhhhccceeeeeecCCCCccccccccccccccccccccccccccccccccccc-----
Confidence 9999999999874 556678999999999999998643 56666666665532 356799999987532
Q ss_pred CchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCC-----------CCCCCCCC
Q psy5372 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQ-----------SPFYSEEC 346 (586)
Q Consensus 278 ~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~-----------~a~~S~~G 346 (586)
.....+++..+.. +|+++|+||||++..... ...|+..+++|+|++++..+. ...+++++
T Consensus 146 --~~~~~~~~~~~~~-----~g~~~V~aaGn~~~~~~~--~~~pa~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (309)
T d2ixta1 146 --NSLISSAVNYAYS-----KGVLIVAAAGNSGYSQGT--IGYPGALPNAIAVAALENVQQNGTYRVADYSSRGYISTAG 216 (309)
T ss_dssp --CHHHHHHHHHHHH-----TTCEEEEECCSCCSSTTC--CCBTTTSTTSEEEEEEEEEEETTEEEECTTSCCCCTTTTT
T ss_pred --ccchhccccchhc-----CCceEEEEeccccccCCC--cCCchhhhcccccccccccccccccccccccccccccccc
Confidence 2356677777777 699999999999875433 345667788999998764322 22334444
Q ss_pred CcceeccccCCCCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCcc
Q psy5372 347 TGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWE 426 (586)
Q Consensus 347 ~~~~~~~~~~~~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~ 426 (586)
+...........+||..++++. .+.+|..++|||||||+|||++|||+|++|+|+++|||++|+.||++++...
T Consensus 217 ~~~~~~~~vdi~apG~~~~s~~-~~~~~~~~sGTS~AaP~VaG~~Ali~~~~p~lt~~~v~~~L~~tA~~~~~~~----- 290 (309)
T d2ixta1 217 DYVIQEGDIEISAPGSSVYSTW-YNGGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG----- 290 (309)
T ss_dssp SSSCCTTCCCEEEECSSEEEEC-TTSSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCB-----
T ss_pred ccccCCCcceeecCCCceeeec-CCCcceeecCccchhHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-----
Confidence 3332222333356889999885 5667889999999999999999999999999999999999999999876543
Q ss_pred ccCCCcccCCcccccccC
Q psy5372 427 RNARDLWFHSAYGFGLIN 444 (586)
Q Consensus 427 ~n~~g~~~~~~~G~G~vn 444 (586)
..+.+...+..+|||++|
T Consensus 291 ~~g~~~~~~~~~g~G~~~ 308 (309)
T d2ixta1 291 GYGAAIGDDYASGFGFAR 308 (309)
T ss_dssp STTCCSSSBTTTBTCBCC
T ss_pred CcCCccCCCcccCCCEec
Confidence 123445567788999887
|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Proteinase K species: Fungus (Tritirachium album), strain limber [TaxId: 37998]
Probab=100.00 E-value=4.1e-42 Score=345.27 Aligned_cols=255 Identities=23% Similarity=0.266 Sum_probs=197.2
Q ss_pred CCcccccCCCCCCCCCCCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCCh
Q psy5372 128 QWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207 (586)
Q Consensus 128 qw~l~~~~~~~~~~~~~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~H 207 (586)
+|+|.++.+.. ...-..+|+ +.+|+||+|+|||+||+.+||||.+++.....+++. +. |.++|
T Consensus 7 ~wgl~~i~~~~-----~~~~~~~~~--~~tG~Gv~VaViDsGid~~Hpdf~g~~~~~~~~~~~-----~~-----d~~gH 69 (279)
T d2pwaa1 7 PWGLARISSTS-----PGTSTYYYD--ESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYS-----SR-----DGNGH 69 (279)
T ss_dssp CHHHHHHTCSS-----TTCCCEECC--TTTTTTEEEEEEESCCCTTCGGGTTCEEEEEESSSC-----SS-----CSSSH
T ss_pred CCchhhhCCCC-----cCCCcceec--CCCCCCeEEEEECcCCCCCChhhcCCceeccCCCCC-----cc-----cccCc
Confidence 59998766421 112234566 669999999999999999999999875432222221 11 67899
Q ss_pred HHHHHHHHhccCCCCCcceeeecCcEEEEEEccCCC----chhHHHHHHhhhcC------CCCeEEEcCCCCCCCCCCCC
Q psy5372 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGE----TTDLIESKALQFGL------DKVDIYSGSWGPPDDGKSMD 277 (586)
Q Consensus 208 GT~vAgiia~~~~n~~g~~GVAp~a~l~~~~v~~~~----~~~~~~a~~~~~~~------~~~~Vin~S~G~~~~~~~~~ 277 (586)
||||||+|++.. .|+||+++|+.+|+++.. .+.+..++.++... .++.|+|+|||...
T Consensus 70 GT~VAgiia~~~------~G~a~~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~n~s~g~~~------ 137 (279)
T d2pwaa1 70 GTHCAGTVGSRT------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGY------ 137 (279)
T ss_dssp HHHHHHHHHCTT------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC------
T ss_pred cccccccccccc------cccCCCccccceeeecCCcccccccccchhheecccccccccccccceeccCCCcc------
Confidence 999999999873 799999999999998653 45556665554421 35679999999642
Q ss_pred CchHHHHHHHHHHHHhccCCCCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCCCCCCCCCCCCCcceeccccCC
Q psy5372 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG 357 (586)
Q Consensus 278 ~~~~~~~~a~~~a~~~~~~~~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~~~~a~~S~~G~~~~~~~~~~~ 357 (586)
...+..++.++.. +|+++|+|+||++... ....|...+++|+|||++..+.++.||++|+..++.
T Consensus 138 --~~~~~~~~~~~~~-----~gil~V~aaGN~~~~~---~~~~p~~~~~vi~VgA~~~~g~~~~~S~~G~~~dv~----- 202 (279)
T d2pwaa1 138 --SSSVNSAAARLQS-----SGVMVAVAAGNNNADA---RNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIF----- 202 (279)
T ss_dssp --CHHHHHHHHHHHH-----TTEEEEEECCSSSSBG---GGEETTTCTTSEEEEEECTTSBBCTTCCBSTTCCEE-----
T ss_pred --ccccchhhhhhhh-----CCcEEEEeCccccccc---cccCCccCCceEEeeeEeecCCCccccCCCCccccc-----
Confidence 2356777777776 6999999999998742 233567789999999999999999999999987774
Q ss_pred CCCCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCcCCCCCCCCccccCCCcccCCc
Q psy5372 358 ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437 (586)
Q Consensus 358 ~apg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~g~~~~~~ 437 (586)
+||..|+++. .++.|..++|||||||+|||++|||++++|.+++++++. |+.||++... ..
T Consensus 203 -APG~~i~s~~-~~~~~~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~-ll~ta~~~~~----------------~~ 263 (279)
T d2pwaa1 203 -GPGTDILSTW-IGGSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRY-IADTANKGDL----------------SN 263 (279)
T ss_dssp -EECSSEEEEE-TTTEEEEECSHHHHHHHHHHHHHHHHHTTSCCTTTHHHH-HHHHSEESCC----------------BS
T ss_pred -cccccccccc-cCCcccCCCcchhHHHHHHHHHHHHHHhCCCChHHHHHH-HHHhCcCCCC----------------CC
Confidence 5889999996 566789999999999999999999999999999988775 6678876532 34
Q ss_pred ccccccCH
Q psy5372 438 YGFGLINT 445 (586)
Q Consensus 438 ~G~G~vna 445 (586)
+|||++|.
T Consensus 264 ~g~g~~n~ 271 (279)
T d2pwaa1 264 IPFGTVNL 271 (279)
T ss_dssp CCTTSCCE
T ss_pred CCCCChhh
Confidence 58888884
|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease kp-43, N-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Probab=100.00 E-value=3.4e-39 Score=329.72 Aligned_cols=278 Identities=17% Similarity=0.135 Sum_probs=201.4
Q ss_pred CCCchHHHHcCCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCC
Q psy5372 144 DLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSK 223 (586)
Q Consensus 144 ~i~~~~aw~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~ 223 (586)
-|+++.||.+.|++|+||+|||||+||+++||+|..+.................+ . .|..+|||||||+|++..++
T Consensus 7 ~~~~~~~~~~~G~tG~Gv~VaIiDsGi~~~h~~~~~~~~~~~~~~~~~~~~~~~~-~-~d~~gHGT~vAgiiag~~~~-- 82 (318)
T d1wmda2 7 IVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNN-A-NDTNGHGTHVAGSVLGNGST-- 82 (318)
T ss_dssp HTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEEEEEETTTTTC-C-CCSSSHHHHHHHHHHCCSSS--
T ss_pred ccCchhHHHccCccccCeEEEEEcCCcCCCCcccccCcccCCcEEeecCCCCCCC-C-CCCCCCCccceeeccccccc--
Confidence 3789999995599999999999999999999999764322111111110000100 1 17789999999999986433
Q ss_pred cceeeecCcEEEEEEccCCC------chhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCC
Q psy5372 224 CGVGVCYGARVGGVKLLDGE------TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQG 297 (586)
Q Consensus 224 g~~GVAp~a~l~~~~v~~~~------~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~ 297 (586)
..||||+|+|+.+|+++.. ...+..++.++.. .+++|+|+|||...... .......+.+.+.+
T Consensus 83 -~~GvAp~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~g~~~~~~----~~~~~~~~~~~~~~----- 151 (318)
T d1wmda2 83 -NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYS-AGARIHTNSWGAAVNGA----YTTDSRNVDDYVRK----- 151 (318)
T ss_dssp -SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHH-TTCSEEEECCCBCCTTC----CCHHHHHHHHHHHH-----
T ss_pred -cchhhhcccceeeeeeeecccccccchhhHHHHHHHHh-cCCceeecccccccccc----cchhHHHHHHHHhh-----
Confidence 5899999999999998642 4445666777766 78999999999764322 22234444444444
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCCCCCceEEEEeeecCC-----------CCCCCCCCCCCcceeccccCCCCCCCceEE
Q psy5372 298 KGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASARED-----------GQSPFYSEECTGLIATAYSGGISDPVKIIT 366 (586)
Q Consensus 298 ~Gi~~V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~-----------~~~a~~S~~G~~~~~~~~~~~~apg~~i~s 366 (586)
+++++|+|+||.+..... ...++..+.+|++.+.... .....++++|+.......+...+||..|++
T Consensus 152 ~~~~~v~aagn~g~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~~~~~~~a~G~~i~~ 229 (318)
T d1wmda2 152 NDMTILFAAGNEGPNGGT--ISAPGTAKNAITVGATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILS 229 (318)
T ss_dssp SSCEEEEECCSCTTSSSC--CCBSTTCSSSEEEEEECCSCGGGCGGGSCTTSBCTTSCCCCCTTSCCCCCEEEECSSEEE
T ss_pred cceeeeeeeccccccccc--cccccccccccceeeccCcccccccccccccccccccccCCCcCCCcccceeecCceEEe
Confidence 699999999999986443 3445566778988887632 334566777766544444444667888877
Q ss_pred ecCC-----------CCeeeccCCCCchHHHHHHHHHHHHhhC-----CCCCHHHHHHHHHhcCCcCCCCCCCCccccCC
Q psy5372 367 TDVH-----------NTCTCEHSGTSAAAPIAAGVLALALEAN-----PNMTWRDCQHILAWTSEREPLSHVSGWERNAR 430 (586)
Q Consensus 367 t~~~-----------~~~~~~~~GTS~AaP~VAG~aALl~~~~-----p~lt~~~v~~~L~~tA~~~~~~~~~~w~~n~~ 430 (586)
+... ...+..++|||||||+|||++|||+|++ +.+++.+||++|..||++.+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~~ALl~~~~p~~~~~~~~~~~i~~~l~~tA~~~~~~~--------- 300 (318)
T d1wmda2 230 ARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGY--------- 300 (318)
T ss_dssp ECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCS---------
T ss_pred ccccccccCccccCCCcceeeccCcchhhHHHHHHHHHHHHHhHhhcCCCCCHHHHHHHHHhhCccCCCCC---------
Confidence 6432 1346778999999999999999999964 46889999999999999875443
Q ss_pred CcccCCcccccccCHHHHHH
Q psy5372 431 DLWFHSAYGFGLINTFKLVS 450 (586)
Q Consensus 431 g~~~~~~~G~G~vna~~Av~ 450 (586)
++..||||+||+.+||+
T Consensus 301 ---~~~~~G~G~ld~~~Al~ 317 (318)
T d1wmda2 301 ---PNGNQGWGRVTLDKSLN 317 (318)
T ss_dssp ---SCTTTTTCBCCHHHHHT
T ss_pred ---CCCCeeeceecHHHHhC
Confidence 46789999999999995
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=99.96 E-value=3.5e-31 Score=273.84 Aligned_cols=290 Identities=17% Similarity=0.124 Sum_probs=167.4
Q ss_pred CchHHHHc-CCCCCCCcEEEEEecCccCCCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccC----C
Q psy5372 146 NIVPVYQE-LNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKP----N 220 (586)
Q Consensus 146 ~~~~aw~~-~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~----~ 220 (586)
++.++|+. .+++|+||+|||||+|++++||||..++.. .++...+ ..+. +..+|+|||++++++.. .
T Consensus 10 ~~~~~y~~~~G~tG~Gv~VaViDtGvd~~H~dl~~~~~~-~~~~~~~--~~~~-----~~~g~~~~~~g~~~~~~~~~~~ 81 (357)
T d1t1ga_ 10 DVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFAS-LGVSAPQ--VVSV-----SVDGATNQPTGDPNGPDGEVEL 81 (357)
T ss_dssp HHHHHTTCCTTCCCTTCEEEEEESSCCCCHHHHHHHHHH-TTCCCCC--EEEE-----ESTTCCCCCCSCTTSTHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCEEEEEEcCCCCCcHHHHHHHhh-cCCCCCC--Ccee-----CCCCCCCCCCCccccccccccC
Confidence 34566651 489999999999999999999999874321 1111111 1110 34455555555443321 1
Q ss_pred CCCcceeeecCcEEEEEEccCCCchhHHHHHHhhh--cCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCC
Q psy5372 221 NSKCGVGVCYGARVGGVKLLDGETTDLIESKALQF--GLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298 (586)
Q Consensus 221 n~~g~~GVAp~a~l~~~~v~~~~~~~~~~a~~~~~--~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~ 298 (586)
+..++.||||+|+|+.+++.... .....++.+++ ..++++|||||||...... .......+..++..+.. +
T Consensus 82 d~~~~~GvAp~A~i~~~~~~~~~-~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~-~~~~~~~~~~~~~~~~~-----~ 154 (357)
T d1t1ga_ 82 DIEVAGALAPGAKIAVYFAPNTD-AGFLNAITTAVHDPTHKPSIVSISWGGPEDSW-APASIAAMNRAFLDAAA-----L 154 (357)
T ss_dssp HHHHHHHHSTTSEEEEEECCSSH-HHHHHHHHHHHHCTTTCCSEEEECCCEEGGGS-CHHHHHHHHHHHHHHHH-----H
T ss_pred CcccceeecccCeEEEEecccCC-CchHHHHHHHHHhhhcCCeEEecccccCcCcc-ccchHHHHHHhhhhhcc-----C
Confidence 33457899999999999998653 23334444433 2368999999999754321 11111234445555554 5
Q ss_pred CcEEEEecCCCCCCCCCCC----CCCCCCCceEEEEeeecCCCCCCCC--------------CCCCCcce----------
Q psy5372 299 GVLFVFAAGNGKYNGDNCA----ADGYINSIYTIAIASAREDGQSPFY--------------SEECTGLI---------- 350 (586)
Q Consensus 299 Gi~~V~AAGN~g~~~~~~~----~~~~~~~~~vi~Vga~~~~~~~a~~--------------S~~G~~~~---------- 350 (586)
|+++|+|+||++....... ...+...+++++|++.........+ +..|....
T Consensus 155 g~~vv~aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~p~~~~~~ 234 (357)
T d1t1ga_ 155 GVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERA 234 (357)
T ss_dssp TCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECSSCEEEEEECBCHHHHCBCCCEECSSSCCCGGGTTS
T ss_pred CcEEEEEeccCCcccccccccccccccccCCcceeeeeecccCCCCccccceecccccccccccCCcccccccCcccccc
Confidence 9999999999986533221 2334456788888876532111100 00010000
Q ss_pred ------------eccccCCCC--CCCceEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCC---CCHHHHHHHHHhc
Q psy5372 351 ------------ATAYSGGIS--DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPN---MTWRDCQHILAWT 413 (586)
Q Consensus 351 ------------~~~~~~~~a--pg~~i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~---lt~~~v~~~L~~t 413 (586)
....++..+ .+..+.++ ..+++|..++|||||||+|||++|||+|+++. +...+++++....
T Consensus 235 ~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~~-~~~~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~ 313 (357)
T d1t1ga_ 235 NVPPSANPGAGSGRGVPDVAGNADPATGYEV-VIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEV 313 (357)
T ss_dssp CCCCCSSTTCCCCCEECSEEEECCTTEEEEE-EETTEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGG
T ss_pred cccccccCCCCCCceecceecccCCCCceEE-ecCCceeecCCchhHHHHHHHHHHHHHhhhcCCcCccCHHHHhhcccc
Confidence 000111000 11222222 23567899999999999999999999998643 3344555443333
Q ss_pred CCcCCCCCC----CCccccCCCcccCCcccccccCHHHHHHHH
Q psy5372 414 SEREPLSHV----SGWERNARDLWFHSAYGFGLINTFKLVSLA 452 (586)
Q Consensus 414 A~~~~~~~~----~~w~~n~~g~~~~~~~G~G~vna~~Av~~a 452 (586)
.+++....+ ..+. -.++..||..+|||++|+.++++++
T Consensus 314 ~~dit~g~~~~~~~~~~-~~a~~G~d~~tG~G~~n~~~~~~~l 355 (357)
T d1t1ga_ 314 FHDITEGNNDIANRARI-YQAGPGWDPCTGLGSPIGIRLLQAL 355 (357)
T ss_dssp EECCCSCBCCCSSSSCC-SBCCSSSBTTTBTCEECHHHHHHHH
T ss_pred eecccccCCCCCCCCCc-ccCccCCCCCccCchhhHHHHHHhh
Confidence 333321110 0111 0133458999999999999999875
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=99.95 E-value=3.1e-30 Score=268.54 Aligned_cols=297 Identities=15% Similarity=0.046 Sum_probs=180.0
Q ss_pred chHHHHc-CCCCCCCcEEEEEecCccC-CCcccccCCCCCCcccccCCCCCCCCCCCCCCCChHHHHHHHHhccCCCCCc
Q psy5372 147 IVPVYQE-LNINGAGVNIIIIDDGMEY-THEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKC 224 (586)
Q Consensus 147 ~~~aw~~-~~~~G~gv~VaViDtGid~-~Hpdl~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~n~~g 224 (586)
+..+|+- ...+|+||+|||||+|.+. .|+||..- ....++......... .......||||+++++.+. .+...
T Consensus 12 l~~~y~~~~~~tG~gvtVaIid~G~~~~~~~Dl~~f-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~e~~-ld~~~ 86 (369)
T d1ga6a_ 12 FPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQF-TSANGLASVNTQTIQ---TGSSNGDYSDDQQGQGEWD-LDSQS 86 (369)
T ss_dssp HHHHTTCTTSCCEEEEEEEEEEESBCHHHHHHHHHH-HHHTTCCCCCEEEEE---CSCTTSCCCBCHHHHHHHH-HHHHH
T ss_pred HHHHhCCCCCCCCCCcEEEEEecCCcccCHHHHHHH-HHhcCCCCCCCCeec---CCCCCCCCCCCCCcceeec-ccccc
Confidence 3444441 2468999999999999764 57888631 110111111000000 0015678999999998876 34456
Q ss_pred ceeeecCcEEEEEEccCC----CchhHHHHHHhhhcCCCCeEEEcCCCCCCCCCCCCCchHHHHHHHHHHHHhccCCCCc
Q psy5372 225 GVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGV 300 (586)
Q Consensus 225 ~~GVAp~a~l~~~~v~~~----~~~~~~~a~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~Gi 300 (586)
+.||||+|+|+.+++++. ...+++.++.++...++++|||+|||............+.+.++++++.. +|+
T Consensus 87 ~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~-----~Gi 161 (369)
T d1ga6a_ 87 IVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAA-----QGQ 161 (369)
T ss_dssp HHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHH-----TTC
T ss_pred ccccccCceEEEEEEeCCCCCcchHHHHHHHHHHHHcCCCceeeccccccccCCCcchHHHHHHHHHHHHHH-----CCC
Confidence 789999999999998753 36789999999987678999999999753221112233445666666666 699
Q ss_pred EEEEecCCCCCCCCC---------CCCCCCCCCceEEEEeeecCCCCCC----CCC--------------CCCCcceecc
Q psy5372 301 LFVFAAGNGKYNGDN---------CAADGYINSIYTIAIASAREDGQSP----FYS--------------EECTGLIATA 353 (586)
Q Consensus 301 ~~V~AAGN~g~~~~~---------~~~~~~~~~~~vi~Vga~~~~~~~a----~~S--------------~~G~~~~~~~ 353 (586)
+||+||||+|..... .....|+.++++++|+++....... ..+ ..|.......
T Consensus 162 ~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~s~~~~ 241 (369)
T d1ga6a_ 162 TFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYES 241 (369)
T ss_dssp EEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEEE
T ss_pred EEEEeCCCCcccCcCCCCCCccccccccccccCCceeeeeeeccccCCCCccccceeecccCCCCcccccCCCCcccccc
Confidence 999999999864321 1234566778999999876332111 000 0010000000
Q ss_pred ccCC-----CCCCCc-------------eEEecCCCCeeeccCCCCchHHHHHHHHHHHHhhCCCC---CHHHHHHHHHh
Q psy5372 354 YSGG-----ISDPVK-------------IITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNM---TWRDCQHILAW 412 (586)
Q Consensus 354 ~~~~-----~apg~~-------------i~st~~~~~~~~~~~GTS~AaP~VAG~aALl~~~~p~l---t~~~v~~~L~~ 412 (586)
.+.. ..++.. ...+ .....|..++|||||||+|||++|||+|++|.+ -...+.+++..
T Consensus 242 ~P~~~~~~~~~~~~r~~pdv~~~~~~~~~~~~-~~~~~~~~~~GTS~AaP~vAGvvALi~~a~~~~~G~~n~~ly~~~~~ 320 (369)
T d1ga6a_ 242 KPSWQSVVSGTPGRRLLPDISFDAAQGTGALI-YNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISS 320 (369)
T ss_dssp CCGGGGGSTTSCSEEEECSEEEECCGGGCEEE-EETTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred CccccccccccCCCceecceecccCCCcceEE-ecCceeeecCCCccchhHHHHHHHHHHhhccCccCCcCHHHHHHHhh
Confidence 0000 000000 0111 124568889999999999999999999999873 22334444433
Q ss_pred c-CC--cCCCCC-CCCccccCCCcccCCcccccccCHHHHHHHHhc
Q psy5372 413 T-SE--REPLSH-VSGWERNARDLWFHSAYGFGLINTFKLVSLAKN 454 (586)
Q Consensus 413 t-A~--~~~~~~-~~~w~~n~~g~~~~~~~G~G~vna~~Av~~a~~ 454 (586)
. +. ++.... ...+....++..|+..+|||++|+.+++++++.
T Consensus 321 ~~~~~~di~~g~n~~~~~~~~a~~G~d~~tG~G~~d~~~l~~~~~s 366 (369)
T d1ga6a_ 321 TPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRS 366 (369)
T ss_dssp CGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHH
T ss_pred CcccccccccCCCCCCCCCcCCcCCCCCCccCchhCHHHHHHHHHh
Confidence 2 22 221111 011112235566899999999999999998874
|
| >d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Proprotein convertase P-domain domain: Furin, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=9.1e-23 Score=178.67 Aligned_cols=123 Identities=35% Similarity=0.642 Sum_probs=110.5
Q ss_pred CCCCcceeeeeeecCcceecCCCCceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCC
Q psy5372 457 NVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPR 536 (586)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~ 536 (586)
+++++..|.... ...+.+| +..++++++++.|.+..+.+.+||||+|.++|+|+++|||+|+|+||+||++.|+.++
T Consensus 1 tv~~~~~c~~~~-~~~~~~i--~~~~~~~~~~t~~~~~~~~i~~lE~V~V~v~i~H~~~GDL~I~L~SPsGT~~~L~~~~ 77 (136)
T d1p8ja1 1 TVAPQRKCIVEI-LVEPKDI--GKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAAR 77 (136)
T ss_dssp CCCCCEEEEEEE-ECSCEEC--TTEEEEEEEECCSTTSTTCCSEEEEEEEEEEEEESCGGGEEEEEECTTCCEEEEECCC
T ss_pred CCCCCcEEecCC-CCCCEEC--CCcEEEEEEeecccCCcccceEEEEEEEEEEEecCCCCcEEEEEECCCCCEEEEeecc
Confidence 468899998876 5566666 4678889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccceEeeeeecCCCCCceEEEEEEECC--C-CCeeeEEEc
Q psy5372 537 PQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTK--Y-DGLLDFITR 582 (586)
Q Consensus 537 ~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~~--~-~g~l~~~~~ 582 (586)
..|....++.+|+|++++||||+++|+|+|+|.|.. . .|.|+-.++
T Consensus 78 ~~d~~~~~~~~~~~~s~~f~GE~~~G~WtL~V~D~~~~~~~G~L~~w~L 126 (136)
T d1p8ja1 78 PHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTL 126 (136)
T ss_dssp TTCCCSCCEEEEEEEECTTTTCCCCEEEEEEEEECSSSCCCEEEEEEEE
T ss_pred CCCccCCCceeeEEEehHhcCCccceEEEEEEEECCCCCCcEEEEEEEE
Confidence 999888999999999999999999999999999974 3 588887765
|
| >d2id4a1 b.18.1.20 (A:461-601) Kexin, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Proprotein convertase P-domain domain: Kexin, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.3e-20 Score=166.39 Aligned_cols=110 Identities=29% Similarity=0.512 Sum_probs=96.3
Q ss_pred ceecCCC-CceEEEEEecCCCCCCccceeeeeEEEEEEEeCCcccceEEEEEcCCCCEEEeecCCCCCCCCCCcccceEe
Q psy5372 473 STGFSYA-SSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSIL 551 (586)
Q Consensus 473 ~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~e~v~v~~~~~~~~~g~l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~ 551 (586)
...|+.. ..+..+++++.+.....++.+||+|+|.++|+|+++|||+|+|+||+||++.|+.++..+....|+.+|.|+
T Consensus 16 ~~~i~~~~~~i~~~~~vt~~~~~~~~~~~lE~V~V~v~i~H~~~gDL~I~L~SP~GT~~~L~~~~~~~~~~~~~~~~~~~ 95 (141)
T d2id4a1 16 SQSTNSTEETLESVITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVRPRDVSSEGFKDWTFM 95 (141)
T ss_dssp CEEECCTTCCEEEEEEECHHHHHHTTEEEEEEEEEEEEEEESSGGGEEEEEECTTCCEEEEECCCTTCCCSSCEEEEEEE
T ss_pred ccccCCCCCceEEEEEEcccccccccccEEEEEEEEEEeecCCcCcEEEEEECCCCCEEEeecccCCCccCCCceeeeee
Confidence 3445543 368888998877666667889999999999999999999999999999999999999988888999999999
Q ss_pred eeeecCCCCCceEEEEEEECC--CCCeeeEEEc
Q psy5372 552 TLKHWGEDPVGEWKFEIFDTK--YDGLLDFITR 582 (586)
Q Consensus 552 s~~f~GE~~~G~Wtl~v~d~~--~~g~l~~~~~ 582 (586)
+++||||+++|+|||+|.|.. +.|.|+-.++
T Consensus 96 s~~f~GE~~~G~WtL~V~D~~~~d~G~L~~w~L 128 (141)
T d2id4a1 96 SVAHWGENGVGDWKIKVKTTENGHRIDFHSWRL 128 (141)
T ss_dssp ESTTTTCCCCEEEEEEEEESSTTCCEEEEEEEE
T ss_pred chhccCCCCCcEEEEEEEECCCCCcEEEEEEEE
Confidence 999999999999999999984 6888887654
|
| >d1kn6a_ d.58.3.3 (A:) Prohormone convertase 1 pro-domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Prohormone convertase 1 pro-domain domain: Prohormone convertase 1 pro-domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=4.2e-11 Score=91.26 Aligned_cols=73 Identities=37% Similarity=0.757 Sum_probs=68.7
Q ss_pred eeeeEEEEEcCCcchHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecc
Q psy5372 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQF 83 (586)
Q Consensus 11 ~~~~~iV~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~ 83 (586)
++|+|+|++.+|.+.|.+||+++|+.+.++|.+++++|+|++......+..........|..+|.|.|+|++.
T Consensus 1 ytN~waV~i~gg~~~A~~iA~~~Gf~n~GqIg~l~d~Y~F~h~~~~krs~~~~~~~~~~L~~d~~V~W~eQQ~ 73 (73)
T d1kn6a_ 1 FVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSALHITKRLSDDDRVTWAEQQY 73 (73)
T ss_dssp CCCCEEEECSSTHHHHHHHHHHHTCEECCCCSSSSCEEEEECCSCCSSSCCCCCTTTTHHHHHHTTSEEECCC
T ss_pred CccceEEEeCCChHHHHHHHHHhCCEEecCCCCCCCEEEEEECCccccccccchhHHHhhccCCCeeeEeecC
Confidence 4799999999999999999999999999999999999999999988888888889999999999999999874
|
| >d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Subtilase propeptides/inhibitors domain: Subtilisin prosegment species: Bacillus subtilis [TaxId: 1423]
Probab=98.17 E-value=3.8e-07 Score=68.84 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=52.0
Q ss_pred eeEEEEEcCCc-----chHHHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCCceeEEeecchhhc
Q psy5372 13 NQWVVHISGDP-----DIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDARVIWTQQQFAKHL 87 (586)
Q Consensus 13 ~~~iV~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~V~~ve~~~~~~~ 87 (586)
++|||.||++. .....++++.|.++.+.+..+ +++++.++++.++.|+++|.|+|||+|.+++.
T Consensus 2 ~~YIV~fK~~~~~~~~~~~~~~v~~~gg~v~~~~~~i-----------~gfs~~l~~~~~~~L~~~p~V~yVE~D~v~~a 70 (71)
T d1scjb_ 2 KKYIVGFKQTMSAMSSAKKKDVISQKGGKVEKQFKYV-----------NAAAATLDEKAVKELKKDPSVAYVEEDHIAHE 70 (71)
T ss_dssp EEEEEEECSSSSCCSHHHHHHHHHTTTCEEEEECSSS-----------SEEEEEECHHHHHHHHTSTTEEEEEECCEEEE
T ss_pred CcEEEEECCCCChHHHHHHHHHHHHcCCeEEEEEeec-----------ceEEEEeCHHHHHHHHcCCCceEEeCCcEEEc
Confidence 68999999874 234566778899988887643 45677888999999999999999999998764
|
| >d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Subtilase propeptides/inhibitors domain: Proteinase A inhibitor 1, POIA1 species: Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]
Probab=97.46 E-value=1.5e-05 Score=60.09 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=43.9
Q ss_pred eeeEEEEEcCCcchH-----HHHHHHhCCeEeeecCCCCCeEEEEEcCCCCCCCCccccccccccCCC--ceeEEeecch
Q psy5372 12 LNQWVVHISGDPDIA-----NQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGLLNDA--RVIWTQQQFA 84 (586)
Q Consensus 12 ~~~~iV~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p--~V~~ve~~~~ 84 (586)
.|+|||.||++.... ...++..|..+.. .|....+++|++.++++.++.|+++| .|+|||+|.+
T Consensus 2 aG~YIVvlK~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~GFaa~l~e~~l~~lr~~p~~~V~yVE~D~V 72 (72)
T d1v5ib1 2 AGKFIVIFKNDVSEDKIRETKDEVIAEGGTITN---------EYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHV 72 (72)
T ss_dssp CEEEEEEECTTCCHHHHHHHHHHHHHHTCCCCE---------EEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCE
T ss_pred CccEEEEECCCCCHHHHHHHHHHHHhcCCceEE---------EEeeeeeeEEEEecCHHHHHHHHhCCCCCCceECCCCC
Confidence 489999999875321 2223344443332 33334567889999999999998855 5999999863
|
| >d1wmda1 b.18.1.20 (A:319-434) Alkaline serine protease kp-43, C-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: Proprotein convertase P-domain domain: Alkaline serine protease kp-43, C-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Probab=94.70 E-value=0.025 Score=45.76 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=33.7
Q ss_pred ccceEEEEEcCCCCEEEeecCCCCCCCCCCcccceEeeeeecCCCCCceEEEEEEEC
Q psy5372 515 RGDVRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDT 571 (586)
Q Consensus 515 ~g~l~i~l~sPsGT~s~l~~~~~~d~~~~g~~~~~~~s~~f~GE~~~G~Wtl~v~d~ 571 (586)
..||+|.|++|+|++..-.. .......+...---+.+-++-.+..|+|+|+|.-.
T Consensus 47 vnDLDL~V~~p~G~~~~~n~--~~~~~~~~~D~~nnvE~V~i~~p~~G~y~i~V~~~ 101 (116)
T d1wmda1 47 VNDLDLVITAPNGTQYVGND--FTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 101 (116)
T ss_dssp CSEEEEEEECTTSCEEETTC--CSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred eeeeeEEEEcCCCCEEeCCc--cccCccCccccCCcEeEEEECCCCCeEEEEEEEEE
Confidence 56999999999999864211 10001111111112345666678899999999865
|