Psyllid ID: psy5407


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
MSRLVRNFVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
cHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccc
ccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccEEccHHHEEEEEEccccEEEEEc
MSRLVRNFVVGDILEQYYQNhinterpksptqepswnAIRTFHMSLSGASVGILChhgyrlldklypgralSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWvvwppaqviNFYFLStkyrvlyv
MSRLVRNFVVGDILEQYYQnhinterpksptqEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
MSRLVRNFVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
***LVRNFVVGDILEQYYQNHI*************WNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLY*
*SRLVRNFVVGDILEQYYQN************EPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
MSRLVRNFVVGDILEQYYQNHINTE********PSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
*SRLVRNFVVGDILEQYYQNHINT********EPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
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MSRLVRNFVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query147 2.2.26 [Sep-21-2011]
Q6DIY8222 Mpv17-like protein 2 OS=X yes N/A 0.884 0.585 0.398 5e-23
Q6DGV7199 Mpv17-like protein 2 OS=D yes N/A 0.891 0.658 0.395 2e-22
A5D787218 Mpv17-like protein 2 OS=B yes N/A 0.734 0.495 0.387 2e-16
Q567V2206 Mpv17-like protein 2 OS=H yes N/A 0.734 0.524 0.378 5e-16
Q8VIK2200 Mpv17-like protein 2 OS=M yes N/A 0.755 0.555 0.385 1e-15
Q54FR4185 PXMP2/4 family protein 4 yes N/A 0.809 0.643 0.308 8e-12
Q54XX9193 PXMP2/4 family protein 2 no N/A 0.884 0.673 0.285 2e-10
Q754F0182 Protein SYM1 OS=Ashbya go yes N/A 0.884 0.714 0.262 1e-08
Q2KIN6176 Protein Mpv17 OS=Bos taur no N/A 0.755 0.630 0.303 1e-08
Q2QL34196 Mpv17-like protein OS=Hom no N/A 0.795 0.596 0.262 2e-08
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1 Back     alignment and function desciption
 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 8/138 (5%)

Query: 10  VGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGR 69
           +GD ++Q  +   + ER +        + +RT  M   G S+G L H  Y  LD+ +PGR
Sbjct: 39  IGDSIQQSREVRRDPERKR--------DWLRTGRMFAIGCSMGPLMHFWYSWLDRSFPGR 90

Query: 70  ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPP 129
            ++ V +KVL DQ+  SPVL   +F+ +G ME       + E  +K    Y A+W VWP 
Sbjct: 91  GITVVMRKVLIDQLVASPVLGLWYFLGMGSMEGQKLEKSWQEFREKFWEFYKADWTVWPA 150

Query: 130 AQVINFYFLSTKYRVLYV 147
           AQ+INFYFLS KYRV+Y+
Sbjct: 151 AQMINFYFLSPKYRVIYI 168





Xenopus tropicalis (taxid: 8364)
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1 Back     alignment and function description
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1 Back     alignment and function description
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2 Back     alignment and function description
>sp|Q8VIK2|M17L2_MOUSE Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1 Back     alignment and function description
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1 Back     alignment and function description
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1 Back     alignment and function description
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1 Back     alignment and function description
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1 Back     alignment and function description
>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query147
312373690205 hypothetical protein AND_17126 [Anophele 0.877 0.629 0.518 2e-34
380019337198 PREDICTED: mpv17-like protein 2-like [Ap 0.870 0.646 0.514 2e-33
110749352184 PREDICTED: mpv17-like protein 2-like [Ap 0.884 0.706 0.5 1e-32
340715726196 PREDICTED: mpv17-like protein 2-like iso 0.877 0.658 0.481 2e-32
332022479190 Mpv17-like protein 2 [Acromyrmex echinat 0.877 0.678 0.503 2e-32
347965823194 AGAP001403-PA [Anopheles gambiae str. PE 0.877 0.664 0.496 2e-32
170034414175 sym-1 [Culex quinquefasciatus] gi|167875 0.877 0.737 0.496 4e-32
350418027194 PREDICTED: mpv17-like protein 2-like [Bo 0.877 0.664 0.474 6e-32
383853363194 PREDICTED: mpv17-like protein 2-like [Me 0.870 0.659 0.485 8e-32
322790753215 hypothetical protein SINV_13515 [Solenop 0.877 0.6 0.489 1e-31
>gi|312373690|gb|EFR21389.1| hypothetical protein AND_17126 [Anopheles darlingi] Back     alignment and taxonomy information
 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 95/137 (69%), Gaps = 8/137 (5%)

Query: 10  VGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGR 69
           VGDI+EQ+Y+ +          Q+ +W+  RT +MS+SG +VG+ CH+ Y  +D+ +PGR
Sbjct: 35  VGDIIEQHYEIYTK--------QQTAWDRQRTRNMSISGMTVGVFCHNWYNFMDRRFPGR 86

Query: 70  ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPP 129
           AL  V KKVL DQ   SP++I +FF TLG+++ SS  D+  E+ DK  RLY AEWVVWPP
Sbjct: 87  ALGLVLKKVLIDQTVASPIVIFLFFATLGVLKRSSWDDMCEEMRDKFLRLYTAEWVVWPP 146

Query: 130 AQVINFYFLSTKYRVLY 146
           AQ+INFY L  KYRVLY
Sbjct: 147 AQIINFYLLPNKYRVLY 163




Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019337|ref|XP_003693566.1| PREDICTED: mpv17-like protein 2-like [Apis florea] Back     alignment and taxonomy information
>gi|110749352|ref|XP_001122520.1| PREDICTED: mpv17-like protein 2-like [Apis mellifera] Back     alignment and taxonomy information
>gi|340715726|ref|XP_003396360.1| PREDICTED: mpv17-like protein 2-like isoform 1 [Bombus terrestris] gi|340715728|ref|XP_003396361.1| PREDICTED: mpv17-like protein 2-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|332022479|gb|EGI62786.1| Mpv17-like protein 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|347965823|ref|XP_001689352.2| AGAP001403-PA [Anopheles gambiae str. PEST] gi|333470337|gb|EDO63257.2| AGAP001403-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170034414|ref|XP_001845069.1| sym-1 [Culex quinquefasciatus] gi|167875702|gb|EDS39085.1| sym-1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|350418027|ref|XP_003491698.1| PREDICTED: mpv17-like protein 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383853363|ref|XP_003702192.1| PREDICTED: mpv17-like protein 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|322790753|gb|EFZ15497.1| hypothetical protein SINV_13515 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query147
FB|FBgn0030481245 CG1662 [Drosophila melanogaste 0.870 0.522 0.442 2.3e-30
FB|FBgn0036217196 CG5906 [Drosophila melanogaste 0.884 0.663 0.427 1.9e-26
ZFIN|ZDB-GENE-040718-306199 mpv17l2 "MPV17 mitochondrial m 0.877 0.648 0.401 1.1e-21
FB|FBgn0052262273 CG32262 [Drosophila melanogast 0.897 0.483 0.371 6.3e-21
UNIPROTKB|E2RIA2206 MPV17L2 "Uncharacterized prote 0.734 0.524 0.387 2.3e-16
UNIPROTKB|F1S919220 MPV17L2 "Uncharacterized prote 0.734 0.490 0.387 2.3e-16
UNIPROTKB|A5D787218 MPV17L2 "Mpv17-like protein 2" 0.734 0.495 0.387 2.9e-16
RGD|1308064200 Mpv17l2 "MPV17 mitochondrial m 0.782 0.575 0.381 4.7e-16
UNIPROTKB|Q567V2206 MPV17L2 "Mpv17-like protein 2" 0.734 0.524 0.378 6e-16
MGI|MGI:2681846200 Mpv17l2 "MPV17 mitochondrial m 0.761 0.56 0.382 9.8e-16
FB|FBgn0030481 CG1662 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 61/138 (44%), Positives = 92/138 (66%)

Query:    10 VGDILEQYYQNHINT-ERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPG 68
             VGD+LEQ+ + +    ER         + + RT HM++SG +VG++CH+ Y++LDK  PG
Sbjct:    89 VGDVLEQHLEIYCGEIER---------FESTRTAHMAISGVTVGVICHYWYKMLDKRMPG 139

Query:    69 RALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWP 128
             R +  V KK++ DQ+  SP+ IS FFVTLG++E  +  +++ EI +K  +LY AEW VWP
Sbjct:   140 RTMRVVAKKIVLDQLICSPIYISAFFVTLGLLEQKTKHEVWEEIKEKAWKLYAAEWTVWP 199

Query:   129 PAQVINFYFLSTKYRVLY 146
              AQ +NFY++ T YR+ Y
Sbjct:   200 VAQFVNFYWIPTHYRIFY 217




GO:0005779 "integral to peroxisomal membrane" evidence=ISS
FB|FBgn0036217 CG5906 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-306 mpv17l2 "MPV17 mitochondrial membrane protein-like 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0052262 CG32262 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2RIA2 MPV17L2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S919 MPV17L2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A5D787 MPV17L2 "Mpv17-like protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1308064 Mpv17l2 "MPV17 mitochondrial membrane protein-like 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q567V2 MPV17L2 "Mpv17-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2681846 Mpv17l2 "MPV17 mitochondrial membrane protein-like 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54FR4PX24D_DICDINo assigned EC number0.30830.80950.6432yesN/A
Q6DGV7M17L2_DANRENo assigned EC number0.39560.89110.6582yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query147
pfam0411768 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family 1e-11
>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family Back     alignment and domain information
 Score = 56.1 bits (136), Expect = 1e-11
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 97  LGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
           +G++E  S  +I  ++ +K      A W VWPP Q INF F+   YRVL+V
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFV 51


The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 147
KOG1944|consensus222 100.0
PF0411768 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0 99.78
>KOG1944|consensus Back     alignment and domain information
Probab=100.00  E-value=2.2e-37  Score=236.57  Aligned_cols=134  Identities=36%  Similarity=0.618  Sum_probs=126.4

Q ss_pred             hhHhhhhhhhhhhhcccccCCCCCCCC-CCCCcHHHHHHHHHHHhh-hhhHHhHHHHHhhhhcCCCChhHHHHHHHhhhh
Q psy5407           6 RNFVVGDILEQYYQNHINTERPKSPTQ-EPSWNAIRTFHMSLSGAS-VGILCHHGYRLLDKLYPGRALSTVFKKVLFDQI   83 (147)
Q Consensus         6 ~l~~~gD~iaQ~~~~~~~~~~~~~~~~-~~~~D~~Rt~r~~~~G~~-~gp~~~~wy~~L~~~~p~~~~~~~~~Kv~~Dq~   83 (147)
                      +++.+||+++|.++....        . .+.+|+.|++||+++|++ .||.+|+||+.||+.+|.++..++++|+++||+
T Consensus        61 ~~~~~~d~~~q~~~~~~~--------~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~~~~~~~~~kvl~dql  132 (222)
T KOG1944|consen   61 LLAAAGDVISQSLEGRSK--------KLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPKKTLITVVKKVLLDQL  132 (222)
T ss_pred             HHHHhchhhhhhhhhhcc--------cccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccCccHHHHHHHHHHhhh
Confidence            344999999999998643        2 478999999999999975 899999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHhhhccccchHhhhhhhhcccCCcccccC
Q psy5407          84 FISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV  147 (147)
Q Consensus        84 v~~P~~~~~f~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~Wp~~~~inF~~VP~~~Rvlfv  147 (147)
                      +++|+.+.+|+.+++++||++.++++++++++++|+++++|++||++|++||.+||+++|++|+
T Consensus       133 ~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~~rvl~~  196 (222)
T KOG1944|consen  133 VFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQYRVLFV  196 (222)
T ss_pred             hhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEccccceehhh
Confidence            9999999999999999999999999999999999999999999999999999999999999985



>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00