Psyllid ID: psy5515

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640----
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGHPVSHVV
ccHHHHHHHHHHHHccccEEEEEEccccccccccccccEEEEEEEEEccccEEEEEEEHHHEEEEEcccccccccccEEEEEccccccccccccccccccEEEEEEEEEccccEEEEEEccccEEEEEEEEccccccccEEEccccccccccccccccccccccccccEEEccEEEEEEccccccccccccccccccEEcccccEEcccEEEEccEEEEEEccccccccEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccccccccEEEEEccEEEEcccccccccccccccccccccccccHHcHHHHccccccEEEcEEEcccccccccccccccccccccccHHHHHHHHccccccccccccccEEEEEccccccEEEEEEcccEEEEEccccccccccccccEEccccEEEEccccccccccccccccccccccccEEEEEEcEEEEcEEEEEEEEEEEEEccccccccEEEcccccccccccccccccccccccccccccccEEEEccEEEEEEccccccccccccccccEEEEEEEEEcccEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHcEEEEEcccEEEEcccccccccEEEEEEEcccccEEEEEEEccEEEEEEEcccccccccEEEEEcccHHHHHHccccccccccEEEEEEEEcccccEEEEEEEccEEEEEEEccccccccccEEEccccHHHHHcccccccHHHHHHcccccEEEEEEEEEEEccccccccccccccEEEEEEHHHHHccccEEEEccEEEEEEccccccccEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEcccccccEEEEccHHHHccccccccccccEEEEEEccccccccccccccccEEcccccccccccccccHHHHHccccccccccEEEcccccccccccccccccHcccccccccccccHHHHccccccccEEEEEEEccccccEEEEEEccccEEEEEccccccccccccEEEccccEEEEEcccccccccccccccccccccccEEEEEEEEEEcccEEEEEEEccccccccccccEEEEcccccHHHHHccccccEEEEEHHHHHHccccEEEEccEEEEEEccccccccccccccccEEEEEEEEcccccEEEEEEEcccHHHccccEEEEEEEEEEcccEEEEEEEEEEcccEEcEcEEccEEccccccccccc
MILRYVSFLLLWEGLQAGITIFEdtfghvvndqsqsidIVRRFTLTNHLLntqvqiipygatitsvitpdcynklddvvLGFDYLEGWLHVvndqsqsidIVRRFTLTNHLLNTQVQIITYGAtitsvitpdcynklddvvlgfdyledtqltrDITLQVTDTQLTHDITLQVTDIQLTRditlqgyrhpanpymgaTIGRVAnriqngsftidgkeyhierndgvitdtqlthdithpanpymgaTIGRVAnriqngsftidgkeyhierndgvnaihggargfdkrsgsrELVNHVVKLFSdsytevdsqslptgeirsvngtafdlrlpkYLGFALqetqwrgfdinyvlsgnlstmaactyidinwgpldwklehiTCLQMrrhfehpryksrsffrvvhpksgrvlnvytdqpgvqfytggnlrpiygkqyALYDQFGAfcletqkypdavhhcyyrvtdtqltrditLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRditlqgyrhpanpymgaTIGRVAnriqngsftidgkeyhierndgvnsihggargfDKVLwlpvvtnsdsvtmsytspdgesgfpgtVHVTVMFTLTLDNRLIIKYNattdkktpisltnhayfnlaghpvshvv
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLqvtdtqlthditlqvtdiqLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFtidgkeyhiERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSdsytevdsqslptgeirsvngtafDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYtspdgesgfpGTVHVTVMFTLTLDNRLIIKYNattdkktpisLTNHAyfnlaghpvshvv
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGHPVSHVV
*ILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFD*****RELVNHVVKLFSDSYTEVD***LPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSY*******GFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAG*******
**LRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGHP*****
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGHPVSHVV
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAG*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MILRYVSFLLLWEGLQAGITIFEDTFGHVVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDITLQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGHPVSHVV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query644 2.2.26 [Sep-21-2011]
Q5EA79342 Aldose 1-epimerase OS=Bos yes N/A 0.456 0.859 0.323 5e-34
Q96C23342 Aldose 1-epimerase OS=Hom yes N/A 0.430 0.809 0.324 6e-33
Q5R8U1342 Aldose 1-epimerase OS=Pon yes N/A 0.430 0.809 0.324 8e-33
Q9GKX6342 Aldose 1-epimerase OS=Sus yes N/A 0.454 0.856 0.314 3e-32
Q66HG4342 Aldose 1-epimerase OS=Rat yes N/A 0.420 0.792 0.316 5e-32
Q8K157342 Aldose 1-epimerase OS=Mus yes N/A 0.433 0.815 0.320 2e-30
P05149 381 Aldose 1-epimerase OS=Aci yes N/A 0.178 0.301 0.470 3e-26
P0A9C4 346 Aldose 1-epimerase OS=Shi yes N/A 0.057 0.106 0.482 8e-26
P0A9C3 346 Aldose 1-epimerase OS=Esc N/A N/A 0.057 0.106 0.482 8e-26
P31765 340 Aldose 1-epimerase OS=Hae yes N/A 0.173 0.329 0.460 6e-21
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1 Back     alignment and function desciption
 Score =  146 bits (369), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 164/390 (42%), Gaps = 96/390 (24%)

Query: 91  VVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDT 150
           V  D       V +F L +  L  +V II++G TIT++   D   +  DVVLGFD LE  
Sbjct: 8   VFGDLPLGAGTVEKFQLQSDQL--RVDIISWGCTITALEVKDRQGRASDVVLGFDELE-- 63

Query: 151 QLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGS 210
                                              GY     PY GA +GRVANRI  G+
Sbjct: 64  -----------------------------------GYLQ-KQPYFGAVVGRVANRIAKGT 87

Query: 211 FTIDGKEYHIERNDGVIT----DTQLTHDITHPANPYMGATIGRVANRIQNG-------- 258
           FT+DGKEY +  N+G  +           +  P     G    RV+   + G        
Sbjct: 88  FTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSNGVEFSRVSPDGEEGYPGELKVW 147

Query: 259 -SFTIDGKE----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQ 312
             +T+DG E    Y  + +            F+    GS  + +H V + +D++  VD  
Sbjct: 148 VMYTLDGGELVVNYRAQASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDEV 207

Query: 313 SLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGP 372
            +PTGEI SV GTAFDLR P  LG  LQE    GFD N+ L G+                
Sbjct: 208 LIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCLKGS---------------- 251

Query: 373 LDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPI 431
                                 + R   RV H  SGRVL VYT QPGVQFYTG  L   +
Sbjct: 252 ---------------------KEKRFCARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTL 290

Query: 432 YGKQYALYDQFGAFCLETQKYPDAVHHCYY 461
            GK  A Y +   FCLETQ +PDAV+  ++
Sbjct: 291 KGKSGAGYPKHSGFCLETQSWPDAVNQPHF 320
Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.
Bos taurus (taxid: 9913)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 3
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1 Back     alignment and function description
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1 Back     alignment and function description
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1 Back     alignment and function description
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1 Back     alignment and function description
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1 Back     alignment and function description
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1 SV=1 Back     alignment and function description
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query644
307181331345 Aldose 1-epimerase [Camponotus floridanu 0.444 0.828 0.340 1e-41
157126610436 aldose-1-epimerase [Aedes aegypti] gi|10 0.472 0.697 0.307 1e-36
322789743425 hypothetical protein SINV_09471 [Solenop 0.442 0.670 0.313 2e-36
312382557500 hypothetical protein AND_04730 [Anophele 0.447 0.576 0.295 3e-36
345496656355 PREDICTED: aldose 1-epimerase-like [Naso 0.437 0.794 0.308 5e-36
158292107441 AGAP004376-PA [Anopheles gambiae str. PE 0.453 0.662 0.299 1e-35
66541614378 PREDICTED: aldose 1-epimerase-like [Apis 0.439 0.748 0.309 1e-35
383849669358 PREDICTED: aldose 1-epimerase-like [Mega 0.464 0.835 0.319 2e-35
195337825364 GM13871 [Drosophila sechellia] gi|194128 0.462 0.818 0.312 4e-35
170030638432 aldose 1-epimerase [Culex quinquefasciat 0.468 0.699 0.297 2e-34
>gi|307181331|gb|EFN68965.1| Aldose 1-epimerase [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 174/385 (45%), Gaps = 99/385 (25%)

Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
           + ++TLTN   N +V I+TYGATIT+V TPD    + DVVLGFD +E             
Sbjct: 22  IEKYTLTNSN-NQEVDIVTYGATITAVRTPDKEGNIADVVLGFDNVE------------- 67

Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
                                   GY+  +NPY GATIGRVANRI   +F +DGK YH+ 
Sbjct: 68  ------------------------GYQSSSNPYFGATIGRVANRIGKATFVVDGKRYHVS 103

Query: 222 RNDG-------------VITDTQLTHD-----ITHPANP--YMGATIGRVANRI-QNGSF 260
           +N G              I +  + HD     +  P N   Y G    ++  R+  +G  
Sbjct: 104 KNKGENSLHGGTHGWNSKIWNASIDHDRVIMSLISPNNDEGYPGKVTAQITFRLTDDGEL 163

Query: 261 TIDGKEYHIERNDGVNAI-HGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEI 319
            ID      E+   +N   H         + + EL  HV  L +D +T  DS+S+PTGEI
Sbjct: 164 HIDMTAKSSEKATPINLTNHSYFNLAGHTTNATELYRHVFTLNADRWTVTDSESIPTGEI 223

Query: 320 RSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEH 379
           RSV  +  DLR    LG  + +    G+D N+ L                  P D+K + 
Sbjct: 224 RSVQNSVMDLRKATILGDVIDKVPGGGYDYNFCLP----------------EPHDYKKKS 267

Query: 380 ITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGG-----NLRPIYGK 434
           +                    +V+HP SGR L VY++QPGVQFYT       N   I GK
Sbjct: 268 LVA------------------KVLHPVSGRSLEVYSNQPGVQFYTSNFLPERNNTAIVGK 309

Query: 435 QYALYDQFGAFCLETQKYPDAVHHC 459
             A Y + GAFCLETQ YPDAV+H 
Sbjct: 310 NGAKYFKHGAFCLETQNYPDAVNHV 334

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157126610|ref|XP_001654671.1| aldose-1-epimerase [Aedes aegypti] gi|108873194|gb|EAT37419.1| AAEL010590-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|322789743|gb|EFZ14909.1| hypothetical protein SINV_09471 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|312382557|gb|EFR27975.1| hypothetical protein AND_04730 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|345496656|ref|XP_001601223.2| PREDICTED: aldose 1-epimerase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|158292107|ref|XP_562126.3| AGAP004376-PA [Anopheles gambiae str. PEST] gi|157017277|gb|EAL40526.3| AGAP004376-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|66541614|ref|XP_624467.1| PREDICTED: aldose 1-epimerase-like [Apis mellifera] Back     alignment and taxonomy information
>gi|383849669|ref|XP_003700467.1| PREDICTED: aldose 1-epimerase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|195337825|ref|XP_002035526.1| GM13871 [Drosophila sechellia] gi|194128619|gb|EDW50662.1| GM13871 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|170030638|ref|XP_001843195.1| aldose 1-epimerase [Culex quinquefasciatus] gi|167867871|gb|EDS31254.1| aldose 1-epimerase [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query644
UNIPROTKB|Q5EA79 342 GALM "Aldose 1-epimerase" [Bos 0.206 0.388 0.525 1.1e-40
UNIPROTKB|Q96C23 342 GALM "Aldose 1-epimerase" [Hom 0.245 0.461 0.497 3.2e-32
UNIPROTKB|Q9GKX6 342 GALM "Aldose 1-epimerase" [Sus 0.245 0.461 0.479 8.6e-32
UNIPROTKB|H7C320194 GALM "Aldose 1-epimerase" [Hom 0.189 0.628 0.56 7.5e-38
UNIPROTKB|F1NZC0 358 GALM "Uncharacterized protein" 0.215 0.388 0.566 4.3e-35
FB|FBgn0043783 370 CG32444 [Drosophila melanogast 0.218 0.381 0.384 1.3e-36
FB|FBgn0035679 364 CG10467 [Drosophila melanogast 0.242 0.428 0.506 7.1e-35
RGD|1359459 342 Galm "galactose mutarotase (al 0.245 0.461 0.497 3.2e-32
UNIPROTKB|Q48IT0 382 galM "Aldose 1-epimerase" [Pse 0.274 0.463 0.441 5.2e-32
UNIPROTKB|J9P687 346 GALM "Uncharacterized protein" 0.245 0.456 0.491 8.6e-32
UNIPROTKB|Q5EA79 GALM "Aldose 1-epimerase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 365 (133.5 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 72/137 (52%), Positives = 93/137 (67%)

Query:   501 QVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHG 560
             + +D+ L  D  L+GY     PY GA +GRVANRI  G+FT+DGKEY +  N+G NS+HG
Sbjct:    51 RASDVVLGFD-ELEGYLQK-QPYFGAVVGRVANRIAKGTFTLDGKEYKLAINNGPNSLHG 108

Query:   561 GARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTD 620
             G +GFDKVLW P V  S+ V  S  SPDGE G+PG + V VM+TL     L++ Y A   
Sbjct:   109 GVKGFDKVLWTPRVL-SNGVEFSRVSPDGEEGYPGELKVWVMYTLD-GGELVVNYRAQAS 166

Query:   621 KKTPISLTNHAYFNLAG 637
             + TP++LTNH+YFNLAG
Sbjct:   167 QTTPVNLTNHSYFNLAG 183
GO:0019318 "hexose metabolic process" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0004034 "aldose 1-epimerase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
UNIPROTKB|Q96C23 GALM "Aldose 1-epimerase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GKX6 GALM "Aldose 1-epimerase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|H7C320 GALM "Aldose 1-epimerase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZC0 GALM "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0043783 CG32444 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0035679 CG10467 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1359459 Galm "galactose mutarotase (aldose 1-epimerase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q48IT0 galM "Aldose 1-epimerase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
UNIPROTKB|J9P687 GALM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.1.3.3LOW CONFIDENCE prediction!
3rd Layer5.1.30.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query644
cd09019 326 cd09019, galactose_mutarotase_like, galactose muta 3e-62
PRK11055 342 PRK11055, galM, galactose-1-epimerase; Provisional 2e-48
TIGR02636 336 TIGR02636, galM_Leloir, galactose mutarotase 2e-42
PLN00194 337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 3e-39
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 2e-37
COG2017 308 COG2017, GalM, Galactose mutarotase and related en 3e-34
pfam01263 301 pfam01263, Aldose_epim, Aldose 1-epimerase 1e-32
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 4e-28
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 8e-25
COG2017308 COG2017, GalM, Galactose mutarotase and related en 3e-22
PTZ00485 376 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisio 3e-19
cd01081 284 cd01081, Aldose_epim, aldose 1-epimerase superfami 1e-17
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 2e-17
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 6e-17
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 1e-15
PRK11055342 PRK11055, galM, galactose-1-epimerase; Provisional 3e-15
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 1e-13
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 1e-13
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 1e-11
PRK11055342 PRK11055, galM, galactose-1-epimerase; Provisional 2e-11
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 2e-10
PTZ00485376 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisio 1e-09
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 1e-08
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 2e-07
cd09022 284 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, 2e-07
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 8e-07
cd01081284 cd01081, Aldose_epim, aldose 1-epimerase superfami 2e-05
cd09024 288 cd09024, Aldose_epim_lacX, Aldose 1-epimerase, sim 2e-05
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 0.001
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information 
 Score =  209 bits (534), Expect = 3e-62
 Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 6/136 (4%)

Query: 509 RDITLQGYRHPA-----NPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGAR 563
           RD+ L G+         +PY GAT+GRVANRI NG FT+DGK Y +E N+G N +HGG +
Sbjct: 34  RDVVL-GFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEANEGPNHLHGGPK 92

Query: 564 GFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKT 623
           GFDK +W       +SVT S  SPDGE GFPG + VTV +TLT DN L I+Y ATTDK T
Sbjct: 93  GFDKRVWDVEEVEENSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPT 152

Query: 624 PISLTNHAYFNLAGHP 639
           P++LTNH+YFNLAG  
Sbjct: 153 PVNLTNHSYFNLAGEG 168

Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily. Length = 326
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|240435 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|240435 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185699 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|185701 cd09024, Aldose_epim_lacX, Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 644
KOG1604|consensus353 100.0
PRK11055342 galM galactose-1-epimerase; Provisional 100.0
PTZ00485376 aldolase 1-epimerase; Provisional 100.0
TIGR02636335 galM_Leloir galactose mutarotase. Members of this 100.0
PLN00194337 aldose 1-epimerase; Provisional 100.0
cd09019326 galactose_mutarotase_like galactose mutarotase_lik 100.0
PRK15172300 putative aldose-1-epimerase; Provisional 100.0
COG2017308 GalM Galactose mutarotase and related enzymes [Car 100.0
cd09022284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 100.0
TIGR02636 335 galM_Leloir galactose mutarotase. Members of this 100.0
PRK11055 342 galM galactose-1-epimerase; Provisional 100.0
KOG1604|consensus 353 100.0
PF01263300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 100.0
PLN00194 337 aldose 1-epimerase; Provisional 100.0
PTZ00485 376 aldolase 1-epimerase; Provisional 99.98
cd09019 326 galactose_mutarotase_like galactose mutarotase_lik 99.97
COG2017 308 GalM Galactose mutarotase and related enzymes [Car 99.96
PRK15172 300 putative aldose-1-epimerase; Provisional 99.96
cd01081284 Aldose_epim aldose 1-epimerase superfamily. Aldose 99.96
cd09021273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 99.96
cd09022 284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 99.93
PF01263 300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 99.92
cd01081 284 Aldose_epim aldose 1-epimerase superfamily. Aldose 99.89
cd09024288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 99.89
cd09024 288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 99.88
cd09021 273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 99.88
cd09025 271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 99.84
cd09025271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 99.84
cd09020 269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 99.63
cd09020269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 98.9
cd09023 284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 98.44
COG0676 287 Uncharacterized enzymes related to aldose 1-epimer 98.43
KOG1594|consensus 305 98.31
cd09269 293 deoxyribose_mutarotase deoxyribose mutarotase_like 97.85
cd09023284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 97.6
PF14486302 DUF4432: Domain of unknown function (DUF4432); PDB 87.03
COG0676287 Uncharacterized enzymes related to aldose 1-epimer 85.18
>KOG1604|consensus Back     alignment and domain information 
Probab=100.00  E-value=7e-67  Score=540.44  Aligned_cols=300  Identities=42%  Similarity=0.641  Sum_probs=275.5

Q ss_pred             eccCCCcceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccc
Q psy5515          93 NDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQ  172 (644)
Q Consensus        93 ~~~~~~~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (644)
                      +++.++.+.++.|+|.|+.+ |+|+|+++||+|+||.+||++||.+|||||||+                          
T Consensus        11 ~~~~~~~~~~~~~tl~n~~~-l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd~--------------------------   63 (353)
T KOG1604|consen   11 NSNTDQKQTIRVYTLGNGKG-LQVTIINLGATITSLKVPDKSGKLDDVVLGFDD--------------------------   63 (353)
T ss_pred             CCcccccCceEEEEecCCCe-eEEEEeeCCcEEEEEEcCCcCCcccceEecccc--------------------------
Confidence            55666778999999999998 999999999999999999999999999999999                          


Q ss_pred             eeccccccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccC
Q psy5515         173 VTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVA  252 (644)
Q Consensus       173 ~~~~~~~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~  252 (644)
                                 +++|.....+|||||||||||||++|.|.+||+.|+|.+|++              +|++|||..| |+
T Consensus        64 -----------v~gY~~~~~~yfGatvGRvANRI~~G~F~ldgk~y~lt~N~g--------------~n~lHgg~~g-f~  117 (353)
T KOG1604|consen   64 -----------VDGYLKDDAAYFGATVGRVANRIAKGKFSLDGKPYKLTVNNG--------------KNTLHGGIKG-FD  117 (353)
T ss_pred             -----------hhhhccCCcceecceehhhhhhcccceEEECCceEEecccCC--------------CccccCCccc-cc
Confidence                       899976688999999999999999999999999999999988              8999999999 99


Q ss_pred             cEEeC------------------------c------EEEE-eCcEEEEEEc-------ccccc-CCCCCceeec-CCCCc
Q psy5515         253 NRIQN------------------------G------SFTI-DGKEYHIERN-------DGVNA-IHGGARGFDK-RSGSR  292 (644)
Q Consensus       253 ~~~~~------------------------g------ty~L-~~n~L~I~~~-------TpvNl-nHpg~~YFNL-g~~~~  292 (644)
                      +++|.                        |      +|+| .+++|.+.++       ||+|| ||+   |||| |+.+.
T Consensus       118 ~~~w~v~~~~~~~~i~f~~~s~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~~~TPiNLtnHs---YfNL~g~~s~  194 (353)
T KOG1604|consen  118 KVIWEVVKHQPDGVIVFSHLSPDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALDKATPINLTNHS---YFNLAGHNSG  194 (353)
T ss_pred             ceEEEEEEecCCCEEEEEEECCCCCCCCCccEEEEEEEEEccCCeeeeeehhhccCCCcceeeccce---eEeccCCCCC
Confidence            99851                        2      9999 4689999987       89999 999   9999 77777


Q ss_pred             cccCcEEEEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccC-CCCceeeEEcCCCCcccccccccccCCC
Q psy5515         293 ELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQ-WRGFDINYVLSGNLSTMAACTYIDINWG  371 (644)
Q Consensus       293 ~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~-~~G~Dh~F~l~~~~~~~~~~~~~d~~~~  371 (644)
                      +|.+|+++|.|++++|+|+.+||||++.+|++|+||||+|+.||+.+.+.. ..|||+||++++...             
T Consensus       195 ~I~~heI~i~a~~~~evd~~~iPTG~I~~v~~t~fD~r~p~~lgd~~~~~~~i~g~d~n~~~~~~~~-------------  261 (353)
T KOG1604|consen  195 GIEGHEIQIEASKITEVDDTLIPTGEITPVKGTTFDFRKPTVLGDRIKQFECIVGYDINYVLDGSVP-------------  261 (353)
T ss_pred             CccceEEEEeecccEecCCccccccceEeccCccccccCCeeccccccccccccCCCcceEEccCCC-------------
Confidence            999999999999999999999999999999999999999999999987765 369999999987432             


Q ss_pred             CCccchhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc
Q psy5515         372 PLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK  451 (644)
Q Consensus       372 p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~  451 (644)
                                           ..+.+.+|++.||+|||.|||+|+||+|||||+|+++.+.||.|+.|.+++|+|+|+|.
T Consensus       262 ---------------------~~~l~~v~k~~hp~Sgr~lEv~TnqPgvqfYTgn~~~~~~gk~g~~y~k~g~~cletq~  320 (353)
T KOG1604|consen  262 ---------------------PNKLRKVAKAVHPKSGRKLEVSTNQPGVQFYTGNFLPDIKGKKGAVYPKHGGLCLETQY  320 (353)
T ss_pred             ---------------------CcccEEEEEEEcCccCcEEEEEeCCCcEEEEeccccccccCCCceEeeccceEEeeccc
Confidence                                 12338899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCCCCceeeeecCceeEEEEEEEeec
Q psy5515         452 YPDAVHHCYYRVTDTQLTRDITLQVTDIQLTR  483 (644)
Q Consensus       452 ~pda~n~~~~~~~~~~L~~ditl~vt~IqLtn  483 (644)
                      +|||+||+.||+.+. -+||.|.|+|.+++.-
T Consensus       321 ~pda~n~~~fp~v~l-~pGE~Y~h~~~y~Fsv  351 (353)
T KOG1604|consen  321 FPDAVNHPNFPSVIL-RPGETYTHETVYKFSV  351 (353)
T ss_pred             CccccccCCCCceEe-cCCCeeeeEEEEEEec
Confidence            999999999999664 3499999999988753

>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information
>KOG1604|consensus Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1594|consensus Back     alignment and domain information
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query644
1snz_A344 Crystal Structure Of Apo Human Galactose Mutarotase 4e-34
1snz_A 344 Crystal Structure Of Apo Human Galactose Mutarotase 2e-33
1lur_A 339 Crystal Structure Of The GalmALDOSE EPIMERASE HOMOL 3e-18
1z45_A 699 Crystal Structure Of The Gal10 Fusion Protein Galac 5e-18
1l7j_A 347 X-Ray Structure Of Galactose Mutarotase From Lactoc 3e-17
1ns0_A 347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1ns2_A 347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1nsm_A 347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1ns8_A 347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1nsu_A 347 Crystal Structure Of Galactose Mutarotase From Lact 2e-16
1nsx_A 347 Crystal Structure Of Galactose Mutarotase From Lact 2e-16
3imh_A 338 Crystal Structure Of Galactose 1-Epimerase From Lac 2e-10
1yga_A 342 Crystal Structure Of Saccharomyces Cerevisiae Yn9a 5e-09
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344 Back     alignment and structure 
Iteration: 1

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 162/379 (42%), Gaps = 102/379 (26%)
Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
           V +F L + LL  +V II++G TIT++   D   +  DVVLGF  LE             
Sbjct: 21  VEKFQLQSDLL--RVDIISWGCTITALEVKDRQGRASDVVLGFAELE------------- 65
Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
                                   GY     PY GA IGRVANRI  G+F +DGKEYH+ 
Sbjct: 66  ------------------------GYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLA 100
Query: 222 RND-------GVITDTQLTHDITHPANPYMGATIGRVANRIQNG---------SFTIDGK 265
            N        GV    ++   +  P     G    R++   + G         ++T+DG 
Sbjct: 101 INKEPNSLHGGVRGFDKV---LWTPRVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGG 157
Query: 266 E----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIR 320
           E    Y  + +            F+     S  + +H V + +D+Y  VD   +PTGE+ 
Sbjct: 158 ELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVA 217
Query: 321 SVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHI 380
            V GTAFDLR P  LG  LQ+    GFD N+ L G+                        
Sbjct: 218 PVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGS------------------------ 253
Query: 381 TCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYGKQYALY 439
                 +HF           RV H  SGRVL VYT QPGVQFYTG  L   + GK  A+Y
Sbjct: 254 ----KEKHF---------CARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVY 300
Query: 440 DQFGAFCLETQKYPDAVHH 458
            +   FCLETQ +PDAV+ 
Sbjct: 301 PKHSGFCLETQNWPDAVNQ 319
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344 Back     alignment and structure
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE From C. Elegans, Northeast Structural Genomics Target Wr66 Length = 339 Back     alignment and structure
>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 Back     alignment and structure
>pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus Lactis (Apo) Length = 347 Back     alignment and structure
>pdb|1NS0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304q Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS2|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSM|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS8|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H96n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H170n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|3IMH|A Chain A, Crystal Structure Of Galactose 1-Epimerase From Lactobacillus Acidophilus Ncfm Length = 338 Back     alignment and structure
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a Protein, New York Structural Genomics Consortium Length = 342 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query644
1lur_A 339 Aldose 1-epimerase; vitamin B12, methyltransferase 6e-65
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 3e-41
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 4e-27
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 2e-10
1nsx_A 347 Galactose mutarotase; epimerase, galactose metabol 3e-63
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 2e-35
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 4e-22
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 9e-06
1snz_A 344 Aldose 1-epimerase; mutarotase, galactosemia, isom 9e-63
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 4e-43
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 3e-28
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 4e-13
3imh_A 338 Galactose-1-epimerase; structural genomics, PSI-2, 6e-61
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 2e-34
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 1e-23
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 2e-19
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 8e-08
1yga_A 342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 4e-55
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 6e-37
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 2e-24
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 6e-08
1z45_A 699 GAL10 bifunctional protein; epimerase, mutarotase, 4e-31
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 1e-22
3mwx_A 326 Aldose 1-epimerase; structural genomics, joint cen 3e-28
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 2e-16
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 4e-07
3nre_A 291 Aldose 1-epimerase; structural genomics, joint cen 3e-19
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 1e-10
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 1e-07
3os7_A 341 Galactose mutarotase-like protein; structural geno 1e-16
3os7_A341 Galactose mutarotase-like protein; structural geno 9e-08
3os7_A341 Galactose mutarotase-like protein; structural geno 5e-05
3dcd_A 307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 9e-09
3q1n_A 294 Galactose mutarotase related enzyme; structural ge 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3k25_A 289 SLR1438 protein; structural genomics, PSI-2, prote 4e-04
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
 Score =  216 bits (552), Expect = 6e-65
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 512 TLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWL 571
           T+  +       +G T+GRVANRI+N +   DGK+Y +  N+G + +HGG  G     W 
Sbjct: 55  TIDEFEKD-AASIGKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWE 113

Query: 572 PVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHA 631
            V    +SV+ S  + + + G PG   + V +T+   N+LII+++AT D    ++LTNHA
Sbjct: 114 VVRHAPESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHATCDTPGLLALTNHA 173

Query: 632 YFNLAGHP 639
           Y+NL G  
Sbjct: 174 YWNLDGSD 181
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Length = 307 Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Length = 289 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query644
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 100.0
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 100.0
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 100.0
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 100.0
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 100.0
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 100.0
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 100.0
3os7_A341 Galactose mutarotase-like protein; structural geno 100.0
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 100.0
3imh_A 338 Galactose-1-epimerase; structural genomics, PSI-2, 100.0
1nsx_A 347 Galactose mutarotase; epimerase, galactose metabol 100.0
3q1n_A294 Galactose mutarotase related enzyme; structural ge 99.98
1snz_A 344 Aldose 1-epimerase; mutarotase, galactosemia, isom 99.98
1lur_A 339 Aldose 1-epimerase; vitamin B12, methyltransferase 99.97
1yga_A 342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 99.97
1z45_A 699 GAL10 bifunctional protein; epimerase, mutarotase, 99.97
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 99.96
3os7_A 341 Galactose mutarotase-like protein; structural geno 99.94
3mwx_A 326 Aldose 1-epimerase; structural genomics, joint cen 99.93
3nre_A 291 Aldose 1-epimerase; structural genomics, joint cen 99.93
3dcd_A 307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 99.93
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 99.92
3q1n_A 294 Galactose mutarotase related enzyme; structural ge 99.92
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 99.91
3k25_A 289 SLR1438 protein; structural genomics, PSI-2, prote 99.88
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 99.86
2cir_A 297 Hexose-6-phosphate mutarotase; hypothetical protei 99.83
2hta_A 309 Putative enzyme related to aldose 1-epimerase; car 99.78
1jov_A 270 HI1317; hypothetical protein, structure 2 function 99.32
1jov_A270 HI1317; hypothetical protein, structure 2 function 98.66
3ty1_A 384 Hypothetical aldose 1-epimerase; supersandwich, st 98.44
3ty1_A384 Hypothetical aldose 1-epimerase; supersandwich, st 97.96
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
Probab=100.00  E-value=1.9e-57  Score=482.07  Aligned_cols=282  Identities=23%  Similarity=0.365  Sum_probs=247.1

Q ss_pred             eecccceeeccCCCcceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccc
Q psy5515          85 LEGWLHVVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQ  164 (644)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~  164 (644)
                      .+.||+.      .++.+..|+|+|++| ++|+|+++||+|++|++++     .|||+||++                  
T Consensus         7 ~~~fg~~------~g~~v~~~tL~n~~g-~~v~i~~~GA~l~sl~~~~-----~dvvlg~~~------------------   56 (338)
T 3imh_A            7 FVKYERK------DNKDLCEITLENDAG-MAVKVLNYGATLEKVLLDG-----ENMILSLNS------------------   56 (338)
T ss_dssp             EEEEEEE------TTEEEEEEEEECSSS-EEEEEETBTTEEEEEEETT-----EECBCCCSS------------------
T ss_pred             Eeecccc------CCeEEEEEEEECCCc-EEEEEecCCcEEEEEEECC-----EEEEecCCC------------------
Confidence            4679976      337899999999977 9999999999999999986     699999998                  


Q ss_pred             cccccccceeccccccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCcc
Q psy5515         165 LTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYM  244 (644)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lH  244 (644)
                                         +++|. .+++|+|++||||||||++|+|+++|++|+|++|++              +|+||
T Consensus        57 -------------------~~~y~-~~~~~~G~~lgp~anRI~~g~f~~~G~~y~L~~N~g--------------~n~LH  102 (338)
T 3imh_A           57 -------------------PEDYS-KERNFLGGTVGRIAGRVRAGQWKHGNEIHQLPLNDG--------------DNHIH  102 (338)
T ss_dssp             -------------------GGGGG-TSCCCTTCEECSBCSEEGGGEEEETTEEEECCCCBT--------------TBEET
T ss_pred             -------------------hHHhc-cCCCeEeeEEEeeCCEecCCEEEECCEEEECCCCCC--------------CcCCC
Confidence                               78884 567899999999999999999999999999999988              89999


Q ss_pred             CCCCCccCcEEe--------------------C---c---------EEEEeC-cEEEEEEc------ccccc-CCCCCce
Q psy5515         245 GATIGRVANRIQ--------------------N---G---------SFTIDG-KEYHIERN------DGVNA-IHGGARG  284 (644)
Q Consensus       245 Gg~~grf~~~~~--------------------~---g---------ty~L~~-n~L~I~~~------TpvNl-nHpg~~Y  284 (644)
                      ||. | |+++.|                    +   |         +|+|++ ++|+|+|+      ||+|+ +||   |
T Consensus       103 Gg~-g-~~~~~W~v~~~~~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~d~~tp~nlg~Hp---Y  177 (338)
T 3imh_A          103 GGI-G-TDMHVWDFRPSCDSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAVSDKLTIFNPVNHT---Y  177 (338)
T ss_dssp             TSS-C-GGGSBCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEEESSSEECBCEECC---E
T ss_pred             CCC-C-cCCceEEEEeeeecCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEecCCCeEEEEeeCC---E
Confidence            999 8 754442                    1   1         999974 89999998      89999 999   9


Q ss_pred             eecCCCCccccCcEEEEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccC-----CCCceeeEEcCCCCcc
Q psy5515         285 FDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQ-----WRGFDINYVLSGNLST  359 (644)
Q Consensus       285 FNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~-----~~G~Dh~F~l~~~~~~  359 (644)
                      |||+.   ++.+|+|+|+|++|+++|+++||||++.+|++|+||||+++.||+.+.+..     ..||||||++++.   
T Consensus       178 FnL~g---~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~Dh~f~l~~~---  251 (338)
T 3imh_A          178 FNLGE---RAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGN---  251 (338)
T ss_dssp             ECTTS---CGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCEEEEEECSC---
T ss_pred             EeCCC---CcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCCCCceeecCC---
Confidence            99952   799999999999999999999999999999999999999999999875431     2589999998531   


Q ss_pred             cccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCccc
Q psy5515         360 MAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALY  439 (644)
Q Consensus       360 ~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y  439 (644)
                                                           +++|+|.+  |||+|+|+|++|+|||||+|+++.. | .|..|
T Consensus       252 -------------------------------------~~~a~l~~--sg~~l~v~t~~p~~q~YTgn~l~~~-g-~g~~~  290 (338)
T 3imh_A          252 -------------------------------------NPAALLSS--NKHRLIVKTNAPALVLYAGNHFNHT-G-IVNNI  290 (338)
T ss_dssp             -------------------------------------SCSEEEEC--SSEEEEEEESSSEEEEECCTTCCSB-T-TBTTC
T ss_pred             -------------------------------------ceEEEEEC--CCeEEEEEeCCCEEEEeCCCCcCCC-C-CCccc
Confidence                                                 22467754  9999999999999999999999765 5 67889


Q ss_pred             CCcCeEEeecccCCCCcCCCCCCceeeeecCceeEEEEEEEeeccc
Q psy5515         440 DQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDIQLTRDI  485 (644)
Q Consensus       440 ~~~~gicLEpq~~pda~n~~~~~~~~~~L~~ditl~vt~IqLtng~  485 (644)
                      .+++|||||||.+|  +|||+||+++ +-+|+.|.+.|.++++.|+
T Consensus       291 ~~~~g~clE~q~~P--~n~~~f~~~v-L~pGe~y~~~t~y~f~~~~  333 (338)
T 3imh_A          291 GQYDGITFEAQCPP--AEGNDLGQIT-LLPFEKFKRTVDWKFEEGH  333 (338)
T ss_dssp             CTTSCEECEEESCC--CSSSCCGGGE-ECTTCCEEEEEEEEEEECC
T ss_pred             CccCEEEEEccCCC--CCCCCCCCeE-ECCCCEEEEEEEEEECCcc
Confidence            99999999999999  9999999853 2449999999999999887
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 644
d1so0a_344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 4e-41
d1so0a_ 344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 2e-22
d1so0a_344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 2e-10
d1z45a1342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 3e-39
d1z45a1 342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 3e-29
d1z45a1342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 5e-06
d1lura_329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 2e-37
d1lura_ 329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 8e-27
d1lura_329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 5e-07
d1nsza_340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 1e-33
d1nsza_ 340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 2e-32
d1nsza_340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 2e-04
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 4e-41
 Identities = 112/378 (29%), Positives = 146/378 (38%), Gaps = 100/378 (26%)

Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
           V +F L +     +V II++G TIT++   D   +  DVVLGF  LE             
Sbjct: 21  VEKFQLQSD--LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEG------------ 66

Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
                                    Y     PY GA IGRVANRI  G+F +DGKEYH+ 
Sbjct: 67  -------------------------YLQK-QPYFGAVIGRVANRIAKGTFKVDGKEYHLA 100

Query: 222 RNDG--------------------VITDTQLTHDITHPANPYMGATIGRVANRIQNGSFT 261
            N                      +    Q +         Y G     V   +  G   
Sbjct: 101 INKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGGELI 160

Query: 262 IDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRS 321
           ++ +    +        H           S  + +H V + +D+Y  VD   +PTGE+  
Sbjct: 161 VNYRAQASQATPVNLTNHSYFNL--AGQASPNINDHEVTIEADTYLPVDETLIPTGEVAP 218

Query: 322 VNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHIT 381
           V GTAFDLR P  LG  LQ+    GFD N+ L G+                         
Sbjct: 219 VQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGS------------------------- 253

Query: 382 CLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYGKQYALYD 440
                        +     RV H  SGRVL VYT QPGVQFYTG  L   + GK  A+Y 
Sbjct: 254 ------------KEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYP 301

Query: 441 QFGAFCLETQKYPDAVHH 458
           +   FCLETQ +PDAV+ 
Sbjct: 302 KHSGFCLETQNWPDAVNQ 319
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query644
d1lura_329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 100.0
d1nsza_340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 100.0
d1so0a_344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 100.0
d1z45a1342 Galactose mutarotase {Baker's yeast (Saccharomyces 100.0
d1lura_ 329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 100.0
d1nsza_ 340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 100.0
d1z45a1 342 Galactose mutarotase {Baker's yeast (Saccharomyces 99.97
d1so0a_ 344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 99.96
d1jova_ 269 Hypothetical protein HI1317 {Haemophilus influenza 99.22
d1jova_269 Hypothetical protein HI1317 {Haemophilus influenza 98.3
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Aldose 1-epimerase homologue
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-60  Score=499.43  Aligned_cols=286  Identities=27%  Similarity=0.410  Sum_probs=254.0

Q ss_pred             EEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccc
Q psy5515         104 RFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDIT  183 (644)
Q Consensus       104 ~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (644)
                      .++|+|.+| ++|+|++|||+|++|++|+++|+..||||||++                                     
T Consensus         4 ~i~l~N~~g-~~v~i~~~GA~i~~l~~pd~~g~~~~vvlg~d~-------------------------------------   45 (329)
T d1lura_           4 FIEIANKQG-LTATLLPFGATLAKLTFPDKNGKNQDLVLGFDT-------------------------------------   45 (329)
T ss_dssp             CEEEECSSS-CEEEEETBTTEEEEEEEECTTSCEEECBCCCSS-------------------------------------
T ss_pred             EEEEECCCC-cEEEEECCCcEEEEEEEECCCCCEeeeEECCCC-------------------------------------
Confidence            578999998 999999999999999999999999999999998                                     


Q ss_pred             cccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC------
Q psy5515         184 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN------  257 (644)
Q Consensus       184 ~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~------  257 (644)
                      +++|. .+++|+||+||||||||++|+|+++|++|+|+.|++              +|+||||..| |+++.|+      
T Consensus        46 ~~~Y~-~~~~~~Ga~igr~aNRI~~g~f~~~G~~y~L~~N~~--------------~n~lHGg~~g-~~~~~w~v~~~~~  109 (329)
T d1lura_          46 IDEFE-KDAASIGKTVGRVANRIKNSTLHFDGKQYTMTPNNG--------------PHYLHGGPNG-LGYRKWEVVRHAP  109 (329)
T ss_dssp             HHHHH-HCSSCTTCEECSBCSEEGGGEEEETTEEEECCCSBT--------------TBEETTCTTS-GGGSBCEEEEEET
T ss_pred             HHHHh-hCCCccCcEecCcCCeeeCCeEEECCEEEEeccCCC--------------CcccccCCCC-cceEEEEEEeecC
Confidence            78894 578899999999999999999999999999999988              8999999999 8887731      


Q ss_pred             --------------c---------EEEEe-CcEEEEEEc------ccccc-CCCCCceeecCCCCccccCcEEEEecceE
Q psy5515         258 --------------G---------SFTID-GKEYHIERN------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSY  306 (644)
Q Consensus       258 --------------g---------ty~L~-~n~L~I~~~------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~  306 (644)
                                    |         +|+|+ +++|+|+|.      ||+|+ ||+   ||||+ ++.+|.+|+|+|+|++|
T Consensus       110 ~~v~~~~~~~~~~~GyPg~l~~~vtY~L~~~~~l~i~~~a~~d~~tp~nlt~H~---YFnL~-~~~~i~~h~L~i~a~~~  185 (329)
T d1lura_         110 ESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHATCDTPGLLALTNHA---YWNLD-GSDTVAEHFLEMEADEF  185 (329)
T ss_dssp             TEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEEECSSCEECBCEECC---EECSS-CCSCSTTCEEEECEEEE
T ss_pred             ceeEEEEEecCCccCcccceEEEEEEEEccCCEEEEEEEEeecccccccccccc---eeecc-ccccccCeEEEeCcCeE
Confidence                          1         99995 678999998      89999 999   99994 35689999999999999


Q ss_pred             EEeCCCCCCccceeccCCCCCCCCCCcccchhhccc-CCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcc
Q psy5515         307 TEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQET-QWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQM  385 (644)
Q Consensus       307 ~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~-~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l  385 (644)
                      +++|++.||||++.++++|+||||+++.|++.+.+. ...++||+|++......                          
T Consensus       186 l~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~--------------------------  239 (329)
T d1lura_         186 VEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPP--------------------------  239 (329)
T ss_dssp             EEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCCCC---------------------------
T ss_pred             EEeCccccccccccccccccccccccccccccccccccceecCCCEEEeecccC--------------------------
Confidence            999999999999999999999999999999886543 34589999998653211                          


Q ss_pred             cccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCCcCCCCCCcee
Q psy5515         386 RRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTD  465 (644)
Q Consensus       386 ~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda~n~~~~~~~~  465 (644)
                              ...+.+++|.+|.||++|+|+|++|++||||+++++ ..++.|..|.+++|||||||.+|||+||++|++++
T Consensus       240 --------~~~~~~~~l~~~~sg~~l~v~t~~p~~qvYT~~~l~-~~~~~g~~~~~~~gi~lEpq~~PdA~N~~~f~~~~  310 (329)
T d1lura_         240 --------STPSTYLRFWSEKSGIELSITTSYPVIHLYASKFLD-CKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVS  310 (329)
T ss_dssp             -----------CCCEEEECTTTCEEEEEEESSSEEEEECCTTCC-EECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCE
T ss_pred             --------CCcceeEEEeCCCCceEEEEeCCCCEEEEeCCCCcC-CCCCCCCCcCCCCEEEEEccCCCCccccCCCCCeE
Confidence                    001446899999999999999999999999999986 46888999999999999999999999999999854


Q ss_pred             eeecCceeEEEEEEEeec
Q psy5515         466 TQLTRDITLQVTDIQLTR  483 (644)
Q Consensus       466 ~~L~~ditl~vt~IqLtn  483 (644)
                       +.+|+.|.+.|.+++++
T Consensus       311 -L~pge~y~~~~~y~Fs~  327 (329)
T d1lura_         311 -LRPGDHYCQEIVYTFSH  327 (329)
T ss_dssp             -ECTTCCEEEEEEEEEEE
T ss_pred             -ECCCCEEEEEEEEEEec
Confidence             34499999999999874
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure