Psyllid ID: psy5587

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
Protein Sequence
MKSRSFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKFPCK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHcccccEEEcccccccccccccccEEEEEEccccccHHHHHHHccccEEEEEEccccccEEEEEEEEcccccEEEEEEEcEEEEccccccccccccccccEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHcEEEEEEEEEEEccccccEEEEEEEEEccEcccccccHHHHHcEEEEEEEEEEEccccccEEEEEEEEEccEEEEEEEccEEEEEEcccHHHcccccccEEEEEEEEcccc
Coil and Loop (DISEMBL)
mksrsfwgnqsklidqlrpggrliipvgpegsaqSLEQIDKNldgtitrtpLMQLIDQlrpggrliipvgpegsaqnLEQIDKNldgtitrtplmqvvyvpltdkqhqwpgrshevcrfkvkfpck
Flexible Loop (DISEMBL)
mksrsfwgnqsKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLtdkqhqwpgrshevcrfkvkfpck
Low Complexity Region (SEG)
MKSRSFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKFPCK
Disordered region (IsUnstruct)
*************I**LRPGGRLIIPV***************LDGTITRTPLMQLIDQLRPGGRLIIPVGP******LEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKF***
Disordered Region (DISOPRED)
*********QSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQH************KVKFP**
Disordered Region (DISEMBL)
********NQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKFPCK
Disordered Region (DISPRO)
****SFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKFPCK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSRSFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKFPCK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	126	2.2.26 [Sep-21-2011]
P22061	227	Protein-L-isoaspartate(D-	yes	N/A	0.436	0.242	0.690	2e-15
P22062	227	Protein-L-isoaspartate(D-	yes	N/A	0.436	0.242	0.672	3e-15
P23506	227	Protein-L-isoaspartate(D-	no	N/A	0.690	0.383	0.488	3e-15
Q5F3N1	228	Protein-L-isoaspartate(D-	yes	N/A	0.436	0.241	0.672	3e-15
P15246	227	Protein-L-isoaspartate(D-	yes	N/A	0.436	0.242	0.672	3e-15
P80895	227	Protein-L-isoaspartate(D-	yes	N/A	0.436	0.242	0.672	4e-15
Q4R5H0	227	Protein-L-isoaspartate(D-	N/A	N/A	0.436	0.242	0.672	4e-15
Q5RA89	227	Protein-L-isoaspartate(D-	no	N/A	0.436	0.242	0.672	4e-15
Q92047	228	Protein-L-isoaspartate(D-	no	N/A	0.436	0.241	0.654	3e-14
Q27869	226	Protein-L-isoaspartate(D-	yes	N/A	0.404	0.225	0.568	1e-10

>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo sapiens GN=PCMT1 PE=1 SV=4

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 7EC: 7

>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 22  RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
           RL++  G  G A+       ++       P   LIDQL+PGGRLI+PVGP G  Q LEQ 
Sbjct: 137 RLVVGDGRMGYAEEAPYDAIHVGAAAPVVP-QALIDQLKPGGRLILPVGPAGGNQMLEQY 195

Query: 82  DKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 196 DKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca fascicularis GN=PCMT1 PE=2 SV=3

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo abelii GN=PCMT1 PE=2 SV=3

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           L+DQL+PGGRLI+PVGP G  Q LEQ DK  DG+    PLM V+YVPLTDK  QW
Sbjct: 169 LLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSTKMKPLMGVIYVPLTDKDKQW 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 40/51 (78%)

Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
           +LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM V+YVPLTD
Sbjct: 173 ELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223

Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 7

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
242014348	287	protein-L-isoaspartate O-methyltransfera	0.460	0.202	0.775	2e-19
241566262	277	protein-L-isoaspartate(D-aspartate) O-me	0.579	0.263	0.621	2e-17
41152134	228	l-isoaspartyl protein carboxyl methyltra	0.452	0.25	0.719	5e-17
390345040	296	PREDICTED: protein-L-isoaspartate(D-aspa	0.460	0.195	0.689	5e-16
318102097	249	l-isoaspartate(d-aspartate) o-methyltran	0.452	0.228	0.666	8e-16
427781597	232	Putative protein-l-isoaspartated-asparta	0.460	0.25	0.689	1e-15
260830152	230	hypothetical protein BRAFLDRAFT_284774 [	0.714	0.391	0.516	1e-15
432936867	249	PREDICTED: protein-L-isoaspartate(D-aspa	0.722	0.365	0.480	3e-15
348531162	246	PREDICTED: protein-L-isoaspartate(D-aspa	0.531	0.272	0.567	8e-15
226443368	249	Protein-L-isoaspartateD-aspartate O-meth	0.452	0.228	0.649	8e-15

>gi|242014348|ref|XP_002427853.1| protein-L-isoaspartate O-methyltransferase, putative [Pediculus humanus corporis] gi|212512322|gb|EEB15115.1| protein-L-isoaspartate O-methyltransferase, putative [Pediculus humanus corporis]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 50/58 (86%)

Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
            LIDQL+PGGRLI+P+GPEG  QNLEQIDK  DG+ TRTPLM VVYVPLTDK+ QWPG
Sbjct: 168 SLIDQLKPGGRLIVPIGPEGGNQNLEQIDKKADGSFTRTPLMGVVYVPLTDKEAQWPG 225

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241566262|ref|XP_002402129.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase, putative [Ixodes scapularis] gi|215499989|gb|EEC09483.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase, putative [Ixodes scapularis]

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGR- 112
           QLI+QL+PGGRLI PVGP G +Q LEQ+DK  DGT+ RT LM VVYVPLTDK+ QWPGR 
Sbjct: 188 QLIEQLKPGGRLICPVGPAGQSQTLEQVDKLQDGTVKRTSLMGVVYVPLTDKEAQWPGRW 247

Query: 113 SHEVCRFKVKFPCK 126
             EV  ++ +   K
Sbjct: 248 LTEVANYRKRLGTK 261

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|41152134|ref|NP_957062.1| l-isoaspartyl protein carboxyl methyltransferase, like [Danio rerio] gi|37589722|gb|AAH59599.1| L-isoaspartyl protein carboxyl methyltransferase, like [Danio rerio]

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 48/57 (84%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           L++QL+PGGRL++PVGPEG +Q LEQ D+  DGT  R PLM VVYVPLTDKQHQWPG
Sbjct: 169 LLEQLKPGGRLVLPVGPEGGSQVLEQYDRQSDGTFLRKPLMGVVYVPLTDKQHQWPG 225

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390345040|ref|XP_786523.3| PREDICTED: protein-L-isoaspartate(D-aspartate) O-methyltransferase-like [Strongylocentrotus purpuratus]

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 49/58 (84%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGR 112
           LI+QL+PGGRLIIPVGP+G+AQNLEQ DK  +G +T+  LM VVYVPLT K+ QWPG+
Sbjct: 237 LIEQLKPGGRLIIPVGPQGAAQNLEQYDKTPEGQVTKKTLMGVVYVPLTGKEQQWPGK 294

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|318102097|ref|NP_001188104.1| l-isoaspartate(d-aspartate) o-methyltransferase precursor [Ictalurus punctatus] gi|308322677|gb|ADO28476.1| l-isoaspartate(d-aspartate) o-methyltransferase [Ictalurus punctatus]

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 46/57 (80%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           L+DQL+PGGRL++PVGPEG +Q LEQ D+  DGT  +  LM VVYVPLTD+ HQWPG
Sbjct: 190 LLDQLKPGGRLVLPVGPEGGSQVLEQYDRQSDGTFVKKALMGVVYVPLTDRHHQWPG 246

Source: Ictalurus punctatus

Species: Ictalurus punctatus

Genus: Ictalurus

Family: Ictaluridae

Order: Siluriformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427781597|gb|JAA56250.1| Putative protein-l-isoaspartated-aspartate o-methyltransferase [Rhipicephalus pulchellus]

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 48/58 (82%)

Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           +L++QL+PGGRLI PVGP G++Q LEQ+DK  DGT+ RT LM VVYVPLTDK  QWPG
Sbjct: 168 KLVEQLKPGGRLICPVGPAGASQTLEQVDKLEDGTVRRTSLMGVVYVPLTDKDSQWPG 225

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260830152|ref|XP_002610025.1| hypothetical protein BRAFLDRAFT_284774 [Branchiostoma floridae] gi|229295388|gb|EEN66035.1| hypothetical protein BRAFLDRAFT_284774 [Branchiostoma floridae]

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 22  RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
           +LI+  G EGS +       ++     + P   LIDQL+PGGRLI+PVGP G  QNLEQ+
Sbjct: 137 KLILGDGREGSPEDAPFDAIHVGAAAPQIP-QALIDQLKPGGRLILPVGPAGGNQNLEQV 195

Query: 82  DKNLDGTITRTPLMQVVYVPLTDKQHQWPGR 112
           DK  DGT+ +  LM V+YVPLT K+ QWPGR
Sbjct: 196 DKLPDGTVRKKNLMGVIYVPLTSKEKQWPGR 226

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432936867|ref|XP_004082318.1| PREDICTED: protein-L-isoaspartate(D-aspartate) O-methyltransferase-like [Oryzias latipes]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 11/102 (10%)

Query: 16  QLRPGGRLIIPVG------PEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPV 69
           +L   GR+ + VG      PEG+      +     G    T    L++QL+PGGRLI+PV
Sbjct: 150 ELLSSGRIRLLVGDGRLGYPEGAPYDAIHV-----GAAAATVPKALLEQLKPGGRLILPV 204

Query: 70  GPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           GPEG  Q LEQ D+  DGT T+  LM VVYVPLTDK+ QWPG
Sbjct: 205 GPEGGNQVLEQYDRQNDGTFTKKALMGVVYVPLTDKRRQWPG 246

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348531162|ref|XP_003453079.1| PREDICTED: protein-L-isoaspartate(D-aspartate) O-methyltransferase-like [Oreochromis niloticus]

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 45  GTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
           G    T    L++QL+PGGRL++PVGP+G +Q LEQ D+  DG+  +  LM VVYVPLTD
Sbjct: 180 GAAAATVPKALLEQLKPGGRLVLPVGPDGGSQVLEQYDRQSDGSFLKKALMGVVYVPLTD 239

Query: 105 KQHQWPG 111
           K+HQWPG
Sbjct: 240 KRHQWPG 246

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|226443368|ref|NP_001140111.1| Protein-L-isoaspartateD-aspartate O-methyltransferase precursor [Salmo salar] gi|221222218|gb|ACM09770.1| Protein-L-isoaspartateD-aspartate O-methyltransferase [Salmo salar]

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 46/57 (80%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           L+DQL+PGGRL++PVGP+G +Q LEQ D+  DGT  R  LM V+YVPLTDK+ QWPG
Sbjct: 190 LLDQLKPGGRLVLPVGPDGGSQVLEQYDRQSDGTFIRKALMGVIYVPLTDKRRQWPG 246

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
ZFIN|ZDB-GENE-040426-1738	249	pcmtl "l-isoaspartyl protein c	0.452	0.228	0.719	2.5e-19
MGI|MGI:97502	227	Pcmt1 "protein-L-isoaspartate	0.690	0.383	0.488	3.7e-16
RGD|3268	227	Pcmt1 "protein-L-isoaspartate	0.690	0.383	0.488	3.7e-16
UNIPROTKB|P22062	227	Pcmt1 "Protein-L-isoaspartate(	0.690	0.383	0.488	3.7e-16
UNIPROTKB|E1BXJ0	228	LOC423008 "Protein-L-isoaspart	0.698	0.385	0.471	3.7e-16
UNIPROTKB|B7Z972	192	PCMT1 "Protein-L-isoaspartate	0.730	0.479	0.484	4.7e-16
UNIPROTKB|H7BY58	286	PCMT1 "Protein-L-isoaspartate	0.730	0.321	0.484	4.7e-16
UNIPROTKB|J3KP72	285	PCMT1 "Protein-L-isoaspartate	0.730	0.322	0.484	4.7e-16
UNIPROTKB|P22061	227	PCMT1 "Protein-L-isoaspartate(	0.730	0.405	0.484	4.7e-16
UNIPROTKB|E2R3G3	286	PCMT1 "Protein-L-isoaspartate	0.730	0.321	0.473	6e-16

ZFIN|ZDB-GENE-040426-1738 pcmtl "l-isoaspartyl protein carboxyl methyltransferase, like" [Danio rerio (taxid:7955)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 41/57 (71%), Positives = 48/57 (84%)

Query:    55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
             L++QL+PGGRL++PVGPEG +Q LEQ D+  DGT  R PLM VVYVPLTDKQHQWPG
Sbjct:   190 LLEQLKPGGRLVLPVGPEGGSQVLEQYDRQSDGTFLRKPLMGVVYVPLTDKQHQWPG 246

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

MGI|MGI:97502 Pcmt1 "protein-L-isoaspartate (D-aspartate) O-methyltransferase 1" [Mus musculus (taxid:10090)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 43/88 (48%), Positives = 54/88 (61%)

Query:    22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
             RL++  G  G A+       ++       P   LIDQL+PGGRLI+PVGP G  Q LEQ 
Sbjct:   137 RLVVGDGRMGYAEEAPYDAIHVGAAAPVVP-QALIDQLKPGGRLILPVGPAGGNQMLEQY 195

Query:    82 DKNLDGTITRTPLMQVVYVPLTDKQHQW 109
             DK  DG++   PLM V+YVPLTDK+ QW
Sbjct:   196 DKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0006479 "protein methylation" evidence=IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0046498 "S-adenosylhomocysteine metabolic process" evidence=ISO

GO:0046500 "S-adenosylmethionine metabolic process" evidence=ISO

RGD|3268 Pcmt1 "protein-L-isoaspartate (D-aspartate) O-methyltransferase 1" [Rattus norvegicus (taxid:10116)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 43/88 (48%), Positives = 54/88 (61%)

Query:    22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
             RL++  G  G A+       ++       P   LIDQL+PGGRLI+PVGP G  Q LEQ 
Sbjct:   137 RLVVGDGRMGFAEEAPYDAIHVGAAAPVVP-QALIDQLKPGGRLILPVGPAGGNQMLEQY 195

Query:    82 DKNLDGTITRTPLMQVVYVPLTDKQHQW 109
             DK  DG++   PLM V+YVPLTDK+ QW
Sbjct:   196 DKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA;ISO;IDA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006479 "protein methylation" evidence=ISO

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IDA

GO:0046498 "S-adenosylhomocysteine metabolic process" evidence=IDA

GO:0046500 "S-adenosylmethionine metabolic process" evidence=IDA

UNIPROTKB|P22062 Pcmt1 "Protein-L-isoaspartate(D-aspartate) O-methyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 43/88 (48%), Positives = 54/88 (61%)

Query:    22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
             RL++  G  G A+       ++       P   LIDQL+PGGRLI+PVGP G  Q LEQ 
Sbjct:   137 RLVVGDGRMGFAEEAPYDAIHVGAAAPVVP-QALIDQLKPGGRLILPVGPAGGNQMLEQY 195

Query:    82 DKNLDGTITRTPLMQVVYVPLTDKQHQW 109
             DK  DG++   PLM V+YVPLTDK+ QW
Sbjct:   196 DKLQDGSVKMKPLMGVIYVPLTDKEKQW 223

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E1BXJ0 LOC423008 "Protein-L-isoaspartate O-methyltransferase" [Gallus gallus (taxid:9031)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 42/89 (47%), Positives = 56/89 (62%)

Query:    22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
             +L++  G +G  +     D    G    T   +L+++L+PGGRLI+PVGPEG+ Q L Q 
Sbjct:   137 KLVVGDGRQGYPEEAPY-DAIHVGAAAPTVPQELLNELKPGGRLILPVGPEGANQVLMQY 195

Query:    82 DKNLDGTITRTPLMQVVYVPLTDKQHQWP 110
             DK  DG I  T LM V+YVPLTDK+ QWP
Sbjct:   196 DKTSDGQIIETQLMGVIYVPLTDKEKQWP 224

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|B7Z972 PCMT1 "Protein-L-isoaspartate O-methyltransferase" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 46/95 (48%), Positives = 58/95 (61%)

Query:    17 LRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ--LIDQLRPGGRLIIPVGPEGS 74
             L   GR+ + VG +G     E+   +        P++   LIDQL+PGGRLI+PVGP G 
Sbjct:    95 LLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGG 153

Query:    75 AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
              Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct:   154 NQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 188

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|H7BY58 PCMT1 "Protein-L-isoaspartate O-methyltransferase" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 46/95 (48%), Positives = 58/95 (61%)

Query:    17 LRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ--LIDQLRPGGRLIIPVGPEGS 74
             L   GR+ + VG +G     E+   +        P++   LIDQL+PGGRLI+PVGP G 
Sbjct:   188 LLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGG 246

Query:    75 AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
              Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct:   247 NQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 281

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|J3KP72 PCMT1 "Protein-L-isoaspartate O-methyltransferase" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 46/95 (48%), Positives = 58/95 (61%)

Query:    17 LRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ--LIDQLRPGGRLIIPVGPEGS 74
             L   GR+ + VG +G     E+   +        P++   LIDQL+PGGRLI+PVGP G 
Sbjct:   188 LLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGG 246

Query:    75 AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
              Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct:   247 NQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 281

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

GO:0046498 "S-adenosylhomocysteine metabolic process" evidence=IEA

GO:0046500 "S-adenosylmethionine metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|P22061 PCMT1 "Protein-L-isoaspartate(D-aspartate) O-methyltransferase" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 46/95 (48%), Positives = 58/95 (61%)

Query:    17 LRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ--LIDQLRPGGRLIIPVGPEGS 74
             L   GR+ + VG +G     E+   +        P++   LIDQL+PGGRLI+PVGP G 
Sbjct:   130 LLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGG 188

Query:    75 AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
              Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct:   189 NQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 223

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=TAS

GO:0030091 "protein repair" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0006479 "protein methylation" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E2R3G3 PCMT1 "Protein-L-isoaspartate O-methyltransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 45/95 (47%), Positives = 58/95 (61%)

Query:    17 LRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ--LIDQLRPGGRLIIPVGPEGS 74
             L   GR+ + VG +G     E+   +        P++   LIDQL+PGGRLI+PVGP G 
Sbjct:   188 LLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGG 246

Query:    75 AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
              Q LEQ DK  DG++   PLM V+YVPLTDK+ QW
Sbjct:   247 NQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 281

GO:0005737 "cytoplasm" evidence=IEA

GO:0004719 "protein-L-isoaspartate (D-aspartate) O-methyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42539	PIMT_ARATH	2, ., 1, ., 1, ., 7, 7	0.5087	0.4365	0.2391	yes	N/A
P15246	PIMT_BOVIN	2, ., 1, ., 1, ., 7, 7	0.6727	0.4365	0.2422	yes	N/A
P80895	PIMT_PIG	2, ., 1, ., 1, ., 7, 7	0.6727	0.4365	0.2422	yes	N/A
Q5F3N1	PIMT_CHICK	2, ., 1, ., 1, ., 7, 7	0.6727	0.4365	0.2412	yes	N/A
P22061	PIMT_HUMAN	2, ., 1, ., 1, ., 7, 7	0.6909	0.4365	0.2422	yes	N/A
P22062	PIMT_RAT	2, ., 1, ., 1, ., 7, 7	0.6727	0.4365	0.2422	yes	N/A
Q27869	PIMT_DROME	2, ., 1, ., 1, ., 7, 7	0.5686	0.4047	0.2256	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!
4th Layer	2.1.1.77	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	126
pfam01135	210	pfam01135, PCMT, Protein-L-isoaspartate(D-aspartat	3e-15
COG2518	209	COG2518, Pcm, Protein-L-isoaspartate carboxylmethy	2e-10
pfam01135	210	pfam01135, PCMT, Protein-L-isoaspartate(D-aspartat	2e-09
PRK00312	212	PRK00312, pcm, protein-L-isoaspartate O-methyltran	2e-07
TIGR00080	215	TIGR00080, pimt, protein-L-isoaspartate(D-aspartat	5e-07
COG2518	209	COG2518, Pcm, Protein-L-isoaspartate carboxylmethy	1e-06
PRK13942	212	PRK13942, PRK13942, protein-L-isoaspartate O-methy	7e-05
PRK00312	212	PRK00312, pcm, protein-L-isoaspartate O-methyltran	0.001

>gnl|CDD|216320 pfam01135, PCMT, Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

 Score = 68.5 bits (168), Expect = 3e-15
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDK 105
           LIDQL+ GGRL+IPVGP G+ Q L+Q DK  DG++    L  V +VPLTD+
Sbjct: 159 LIDQLKEGGRLVIPVGPNGN-QVLQQFDKRNDGSVVIKDLEGVRFVPLTDR 208

Length = 210

>gnl|CDD|225316 COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           L+DQL+PGGRL+IPVG    AQ L +I K+ DG   R  L  V +VPL      +
Sbjct: 155 LLDQLKPGGRLVIPVGSGP-AQRLLRITKDGDGNFERRDLFNVRFVPLVGG-DGF 207

Length = 209

>gnl|CDD|216320 pfam01135, PCMT, Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLI 56
           LIDQL+ GGRL+IPVGP G+ Q L+Q DK  DG++    L  + 
Sbjct: 159 LIDQLKEGGRLVIPVGPNGN-QVLQQFDKRNDGSVVIKDLEGVR 201

Length = 210

>gnl|CDD|178974 PRK00312, pcm, protein-L-isoaspartate O-methyltransferase; Reviewed

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
           L++QL+ GG L+ PVG E   Q L ++ K   G   R  L +V +VPL  
Sbjct: 161 LLEQLKEGGILVAPVGGEEQ-QLLTRVRKR-GGRFEREVLEEVRFVPLVK 208

Length = 212

>gnl|CDD|232816 TIGR00080, pimt, protein-L-isoaspartate(D-aspartate) O-methyltransferase

 Score = 46.0 bits (109), Expect = 5e-07
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+ GG L++PVG     Q L++ +K   G I    +  V +VPL   +   
Sbjct: 163 LIDQLKEGGILVMPVGEY--LQVLKRAEK-RGGEIIIKDVEPVAFVPLVGGEGFQ 214

This is an all-kingdom (but not all species) full-length ortholog enzyme for repairing aging proteins. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt [Protein fate, Protein modification and repair]. Length = 215

>gnl|CDD|225316 COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 12  KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITR 49
            L+DQL+PGGRL+IPVG    AQ L +I K+ DG   R
Sbjct: 154 ALLDQLKPGGRLVIPVGSGP-AQRLLRITKDGDGNFER 190

Length = 209

>gnl|CDD|184409 PRK13942, PRK13942, protein-L-isoaspartate O-methyltransferase; Provisional

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDK 105
           LI+QL+ GG ++IPVG    +Q L +++K+ +G I +  L +V +VPL  K
Sbjct: 162 LIEQLKDGGIMVIPVG--SYSQELIRVEKD-NGKIIKKKLGEVAFVPLIGK 209

Length = 212

>gnl|CDD|178974 PRK00312, pcm, protein-L-isoaspartate O-methyltransferase; Reviewed

 Score = 36.3 bits (85), Expect = 0.001
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQ 54
           L++QL+ GG L+ PVG E   Q L ++ K   G   R  L +
Sbjct: 161 LLEQLKEGGILVAPVGGEEQ-QLLTRVRKR-GGRFEREVLEE 200

Length = 212

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	126
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	99.81
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	99.72
KOG1661|consensus	237		99.5
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	99.28
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	99.2
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	99.19
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	98.93
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	98.03
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.88
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.72
KOG1661|consensus	237		97.24
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.42
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	95.33
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.08
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	92.54
PF15025	148	DUF4524: Domain of unknown function (DUF4524)	80.97

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=1.3e-19  Score=140.22  Aligned_cols=95  Identities=32%  Similarity=0.463  Sum_probs=82.0

Q ss_pred             hHHHHhhcCCCcE-EEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCc
Q psy5587          10 QSKLIDQLRPGGR-LIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGT   88 (126)
Q Consensus        10 p~~LleQL~~~G~-lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~   88 (126)
                      +++.|++|...++ ++..||..|+ ...+|||+|++++|++++|++|++||++||+|++|++.. +.|.+++++|+++++
T Consensus       110 A~~~L~~lg~~nV~v~~gDG~~G~-~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG~~-~~q~l~~~~k~~~~~  187 (209)
T COG2518         110 ARRNLETLGYENVTVRHGDGSKGW-PEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVGSG-PAQRLLRITKDGDGN  187 (209)
T ss_pred             HHHHHHHcCCCceEEEECCcccCC-CCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEccC-CcEEEEEEEEcCCCc
Confidence            5677999998653 3555554443 677999999999999999999999999999999999955 689999999998888


Q ss_pred             EEEEEeecEEEEeecCCC
Q psy5587          89 ITRTPLMQVVYVPLTDKQ  106 (126)
Q Consensus        89 ~~~~~l~~v~fvPL~~~~  106 (126)
                      +.++.+++++|+||.+..
T Consensus       188 ~~~~~l~~v~~vPl~~~~  205 (209)
T COG2518         188 FERRDLFNVRFVPLVGGD  205 (209)
T ss_pred             EEEeeeccceeeecCCcc
Confidence            999999999999999954

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=99.72  E-value=1.7e-17  Score=128.11  Aligned_cols=95  Identities=29%  Similarity=0.515  Sum_probs=73.7

Q ss_pred             hHHHHhhcCCCc-EEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCc
Q psy5587          10 QSKLIDQLRPGG-RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGT   88 (126)
Q Consensus        10 p~~LleQL~~~G-~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~   88 (126)
                      ++..++.+.... .++..++..+. ...++||+|+++++++++|.+|++||++||+|++|++. .+.|.+++++|.++|+
T Consensus       113 A~~~l~~~~~~nv~~~~gdg~~g~-~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~~-~~~~~l~~~~k~~~g~  190 (209)
T PF01135_consen  113 ARRNLARLGIDNVEVVVGDGSEGW-PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIGQ-GGSQRLVRITKKGDGE  190 (209)
T ss_dssp             HHHHHHHHTTHSEEEEES-GGGTT-GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEESS-SSSEEEEEEEEETTTE
T ss_pred             HHHHHHHhccCceeEEEcchhhcc-ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEcc-CCceEEEEEEEeCCCc
Confidence            355677777655 45666665554 56789999999999999999999999999999999997 4789999999998899


Q ss_pred             EEEEEeecEEEEeecCCC
Q psy5587          89 ITRTPLMQVVYVPLTDKQ  106 (126)
Q Consensus        89 ~~~~~l~~v~fvPL~~~~  106 (126)
                      ++.+.+++|+|+||.+..
T Consensus       191 ~~~~~~~~~~fvpl~~~~  208 (209)
T PF01135_consen  191 FSREELFPVRFVPLVGGE  208 (209)
T ss_dssp             EEEEEEEEE---B-BSCC
T ss_pred             EEEEEEeeEEEEeccCCC
Confidence            999999999999999864

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>KOG1661|consensus

Probab=99.50  E-value=6.4e-14  Score=109.03  Aligned_cols=97  Identities=42%  Similarity=0.620  Sum_probs=82.7

Q ss_pred             HhhcCCCcEEEEeecCCCCc--ceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEE
Q psy5587          14 IDQLRPGGRLIIPVGPEGSA--QSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITR   91 (126)
Q Consensus        14 leQL~~~G~lv~pvg~~g~~--~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~   91 (126)
                      .+.|+. |.+.+-+|+ +.+  ++.++||+|+++||++++|+++++||++||+|++|+++....|.+..+.|+.+|.+..
T Consensus       138 ~~~~~~-~~l~ivvGD-gr~g~~e~a~YDaIhvGAaa~~~pq~l~dqL~~gGrllip~~~~~~~q~~~~~dk~~~gki~~  215 (237)
T KOG1661|consen  138 SSKLKR-GELSIVVGD-GRKGYAEQAPYDAIHVGAAASELPQELLDQLKPGGRLLIPVGQDGGTQYLRQIDKNEDGKIKL  215 (237)
T ss_pred             hhhhcc-CceEEEeCC-ccccCCccCCcceEEEccCccccHHHHHHhhccCCeEEEeecccCceeEEEeecccccCceee
Confidence            677776 555555775 332  6788999999999999999999999999999999999765678888899988899999


Q ss_pred             EEeecEEEEeecCCCCCCCCc
Q psy5587          92 TPLMQVVYVPLTDKQHQWPGR  112 (126)
Q Consensus        92 ~~l~~v~fvPL~~~~~~~~~~  112 (126)
                      +.+|.++|+|+.....+|...
T Consensus       216 ~~~f~v~yvPlt~~~~q~~~~  236 (237)
T KOG1661|consen  216 RTLFSVRYVPLTSRESQPSRF  236 (237)
T ss_pred             eEeeceEEEeccccccccCCC
Confidence            999999999999988877543

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=99.28  E-value=2.8e-11  Score=92.82  Aligned_cols=70  Identities=31%  Similarity=0.499  Sum_probs=63.0

Q ss_pred             eEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCC
Q psy5587          35 SLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQH  107 (126)
Q Consensus        35 ~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~  107 (126)
                      ...+||+|+++++++++|++|+++|++||++++|++..  .|.+.+++|+ +++++.+.+++++|+||++..+
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~f~~~~~~~~  211 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPVGSY--SQELIRVEKD-NGKIIKKKLGEVAFVPLIGKNG  211 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEEEcCC--CcEEEEEEEE-CCEEEEEEeccEEEEecccCCC
Confidence            45789999999999999999999999999999999864  5889999997 4679999999999999998764

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=99.20  E-value=1e-10  Score=89.10  Aligned_cols=66  Identities=27%  Similarity=0.402  Sum_probs=59.4

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeec
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLT  103 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~  103 (126)
                      ..+||+|+++++.+.+|+.|+++|++||++++|+... ..|.+++++|. ++.++.+.+++|+||||+
T Consensus       140 ~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~f~pl~  205 (205)
T PRK13944        140 HAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPVEEG-VGQVLYKVVKR-GEKVEKRAITYVLFVPLR  205 (205)
T ss_pred             CCCccEEEEccCcchhhHHHHHhcCcCcEEEEEEcCC-CceEEEEEEEe-CCEEEEEEeceEEEEecC
Confidence            4689999999999999999999999999999999865 56889999997 457999999999999985

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=99.19  E-value=1.6e-10  Score=88.26  Aligned_cols=71  Identities=31%  Similarity=0.411  Sum_probs=64.1

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW  109 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~  109 (126)
                      ..+||+|+++++.+.+|+.+.++|++||++++|++.  ..+.+.+++|. ++.+..+.++++.|+||.++.++|
T Consensus       144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~pl~~~~~~~  214 (215)
T TIGR00080       144 LAPYDRIYVTAAGPKIPEALIDQLKEGGILVMPVGE--YLQVLKRAEKR-GGEIIIKDVEPVAFVPLVGGEGFQ  214 (215)
T ss_pred             cCCCCEEEEcCCcccccHHHHHhcCcCcEEEEEEcC--CceEEEEEEEe-CCEEEEEEeeeEEEEeCCCCccCC
Confidence            458999999999999999999999999999999986  46889999987 567999999999999999988775

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=98.93  E-value=9.6e-09  Score=77.99  Aligned_cols=69  Identities=32%  Similarity=0.489  Sum_probs=61.1

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ  106 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~  106 (126)
                      ..+||.|+++++.+.+|..+.++|++||++++|++.. +.+.+.+++|. ++.++.+.+++++|+|+.++.
T Consensus       142 ~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~  210 (212)
T PRK00312        142 YAPFDRILVTAAAPEIPRALLEQLKEGGILVAPVGGE-EQQLLTRVRKR-GGRFEREVLEEVRFVPLVKGE  210 (212)
T ss_pred             CCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEEcCC-CceEEEEEEEc-CCeEEEEEEccEEEEecCCCC
Confidence            4689999999999999999999999999999999843 56788888885 567999999999999999865

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=98.03  E-value=2e-05  Score=64.65  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=58.6

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCC-CCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE-GSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQ  108 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~-~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~  108 (126)
                      ..+||.|+++++++++|..|+++|++||++++|+... ...+...+++|. ++.++...+++++|++..|.-+.
T Consensus       147 ~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~~~~~l~~~~~~~~~~r~-~~~~~~~~~~~~~~l~~~G~lg~  219 (322)
T PRK13943        147 FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKK-DPYLVGNYKLETRFIKAGGNLGN  219 (322)
T ss_pred             cCCccEEEECCchHHhHHHHHHhcCCCCEEEEEeCCccCCCCceEEEEec-CCCceEEEEEEeeEEcccchHHH
Confidence            3579999999999999999999999999999998642 134566777886 44689899999999999775543

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.88  E-value=2.5e-05  Score=60.84  Aligned_cols=55  Identities=38%  Similarity=0.578  Sum_probs=43.9

Q ss_pred             cChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           8 GNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         8 ~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      -.|+.|++||++||+||+|+|.+ ..|....+.+.-.+.         +.+...+++.|+|+.+.
T Consensus       150 ~vP~~Ll~QL~~gGrlv~PvG~~-~~q~l~~~~k~~~~~---------~~~~~l~~v~~vPl~~~  204 (209)
T COG2518         150 EVPEALLDQLKPGGRLVIPVGSG-PAQRLLRITKDGDGN---------FERRDLFNVRFVPLVGG  204 (209)
T ss_pred             CCCHHHHHhcccCCEEEEEEccC-CcEEEEEEEEcCCCc---------EEEeeeccceeeecCCc
Confidence            46899999999999999999953 458888998874432         25667789999999763

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.72  E-value=2.9e-05  Score=60.02  Aligned_cols=58  Identities=31%  Similarity=0.484  Sum_probs=42.7

Q ss_pred             ccccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           5 SFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         5 ~~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      +.+..|+.|++||++||+||+|++. +..+....|+|.-.+.         +++...+++.|+|+.+.
T Consensus       150 a~~~ip~~l~~qL~~gGrLV~pi~~-~~~~~l~~~~k~~~g~---------~~~~~~~~~~fvpl~~~  207 (209)
T PF01135_consen  150 AVPEIPEALLEQLKPGGRLVAPIGQ-GGSQRLVRITKKGDGE---------FSREELFPVRFVPLVGG  207 (209)
T ss_dssp             BBSS--HHHHHTEEEEEEEEEEESS-SSSEEEEEEEEETTTE---------EEEEEEEEE---B-BSC
T ss_pred             ccchHHHHHHHhcCCCcEEEEEEcc-CCceEEEEEEEeCCCc---------EEEEEEeeEEEEeccCC
Confidence            4567899999999999999999997 4568899999986443         26778899999999864

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>KOG1661|consensus

Probab=97.24  E-value=0.00049  Score=54.14  Aligned_cols=56  Identities=45%  Similarity=0.686  Sum_probs=44.3

Q ss_pred             cChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           8 GNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         8 ~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      ..|+.|++||++||+|++|++.++..|....+|+.-.+.         +..-..-+++++|+++.
T Consensus       174 ~~pq~l~dqL~~gGrllip~~~~~~~q~~~~~dk~~~gk---------i~~~~~f~v~yvPlt~~  229 (237)
T KOG1661|consen  174 ELPQELLDQLKPGGRLLIPVGQDGGTQYLRQIDKNEDGK---------IKLRTLFSVRYVPLTSR  229 (237)
T ss_pred             ccHHHHHHhhccCCeEEEeecccCceeEEEeecccccCc---------eeeeEeeceEEEecccc
Confidence            468999999999999999999866668888888875443         23445568888999875

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.42  E-value=0.0094  Score=45.24  Aligned_cols=52  Identities=29%  Similarity=0.375  Sum_probs=40.0

Q ss_pred             ccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEe
Q psy5587           7 WGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPV   69 (126)
Q Consensus         7 ~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl   69 (126)
                      ...|+.++++|++||+|++|++.+ ..+....|+|...+          +++...+++.|+|+
T Consensus       153 ~~~~~~l~~~L~~gG~lvi~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~f~pl  204 (205)
T PRK13944        153 STIPSALVRQLKDGGVLVIPVEEG-VGQVLYKVVKRGEK----------VEKRAITYVLFVPL  204 (205)
T ss_pred             chhhHHHHHhcCcCcEEEEEEcCC-CceEEEEEEEeCCE----------EEEEEeceEEEEec
Confidence            456788999999999999999864 34777888885322          24566789999997

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.33  E-value=0.057  Score=41.24  Aligned_cols=54  Identities=28%  Similarity=0.410  Sum_probs=40.8

Q ss_pred             ccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           7 WGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         7 ~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      ...|+.++++|++||+|++|++. . .+....+.+...+.          .+....++.|+|+.+.
T Consensus       156 ~~~~~~l~~~LkpgG~lvi~~~~-~-~~~~~~~~~~~~~~----------~~~~~~~~~f~~~~~~  209 (212)
T PRK13942        156 PDIPKPLIEQLKDGGIMVIPVGS-Y-SQELIRVEKDNGKI----------IKKKLGEVAFVPLIGK  209 (212)
T ss_pred             ccchHHHHHhhCCCcEEEEEEcC-C-CcEEEEEEEECCEE----------EEEEeccEEEEecccC
Confidence            34578899999999999999985 3 47778888864222          4555678899998764

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.08  E-value=0.079  Score=40.24  Aligned_cols=55  Identities=27%  Similarity=0.243  Sum_probs=42.7

Q ss_pred             cccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           6 FWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         6 ~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      ....++.+.++|++||++++|.+. + .+....|.+...+.          .+....++.|+|+..+
T Consensus       156 ~~~~~~~~~~~L~~gG~lv~~~~~-~-~~~~~~~~~~~~~~----------~~~~~~~~~~~pl~~~  210 (215)
T TIGR00080       156 GPKIPEALIDQLKEGGILVMPVGE-Y-LQVLKRAEKRGGEI----------IIKDVEPVAFVPLVGG  210 (215)
T ss_pred             cccccHHHHHhcCcCcEEEEEEcC-C-ceEEEEEEEeCCEE----------EEEEeeeEEEEeCCCC
Confidence            456788899999999999999985 3 47777888754332          4667788999999764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=92.54  E-value=0.41  Score=36.06  Aligned_cols=53  Identities=25%  Similarity=0.328  Sum_probs=37.3

Q ss_pred             ChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           9 NQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         9 ~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      .++.+.++|++||+++++.+. +..+....|.++-...          ..-...++.|+|+.++
T Consensus       157 ~~~~l~~~L~~gG~lv~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~p~~~~  209 (212)
T PRK00312        157 IPRALLEQLKEGGILVAPVGG-EEQQLLTRVRKRGGRF----------EREVLEEVRFVPLVKG  209 (212)
T ss_pred             hhHHHHHhcCCCcEEEEEEcC-CCceEEEEEEEcCCeE----------EEEEEccEEEEecCCC
Confidence            467899999999999999984 3456677777742221          3334577788888753

>PF15025 DUF4524: Domain of unknown function (DUF4524)

Probab=80.97  E-value=4.5  Score=30.00  Aligned_cols=70  Identities=23%  Similarity=0.333  Sum_probs=41.4

Q ss_pred             eecCccchhhhhhccCCcEEEEEecC-CCC-ceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCCCCceeEEEEEEEee
Q psy5587          46 TITRTPLMQLIDQLRPGGRLIIPVGP-EGS-AQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHEVCRFKVKF  123 (126)
Q Consensus        46 ~av~~iP~~ll~QL~~GGrlvvPl~~-~~~-~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~~~~~~~~~~~~~~~  123 (126)
                      +..|.+|+.++...+.-- ++.-+.. .++ ...-..+.+..+|+++.+.+.+...+-|.....          .|.|+|
T Consensus        74 a~~Pyl~~~li~~~rk~~-~~~~~~~~~WP~~~~~~~~~~~~~G~v~i~S~dg~A~l~L~~~~~----------~ftV~f  142 (148)
T PF15025_consen   74 ATRPYLPESLIPSERKKR-IFIDISEVAWPSSSSDDSVIRDQDGSVEISSLDGHAYLCLSPSQQ----------EFTVKF  142 (148)
T ss_pred             CCCCccchHhChhhceee-eeecceeeeCCCccCCCcEEECCCCeEEEEEeCCcEEEEEcccCC----------EEEEEE
Confidence            345778888877764432 3321111 111 111113456678889999998877776654433          589999


Q ss_pred             cCC
Q psy5587         124 PCK  126 (126)
Q Consensus       124 ~~~  126 (126)
                      +||
T Consensus       143 ~~k  145 (148)
T PF15025_consen  143 LCK  145 (148)
T ss_pred             EEE
Confidence            996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	126
1i1n_A	226	Human Protein L-Isoaspartate O-Methyltransferase Wi		2e-16
1r18_A	227	Drosophila Protein Isoaspartyl Methyltransferase Wi		2e-10

>pdb|1I1N|A Chain A, Human Protein L-Isoaspartate O-Methyltransferase With S- Adenosyl Homocysteine Length = 226

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct: 168 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 222

>pdb|1R18|A Chain A, Drosophila Protein Isoaspartyl Methyltransferase With S-Adenosyl-L- Homocysteine Length = 227

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
           +LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM V+YVPL
Sbjct: 179 ELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 227

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	126
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	2e-23
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	1e-19
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	5e-15
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	4e-19
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	8e-16
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	3e-11
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	2e-15
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	4e-15
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	1e-10
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	4e-13
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	1e-08
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	9e-12
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	1e-07

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* Length = 226

 Score = 89.5 bits (223), Expect = 2e-23
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
           LIDQL+PGGRLI+PVGP G  Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW
Sbjct: 168 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 222

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 Length = 227

 Score = 79.6 bits (197), Expect = 1e-19
 Identities = 27/48 (56%), Positives = 37/48 (77%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
           LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM V+YVPL
Sbjct: 180 LINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 227

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 Length = 227

 Score = 67.3 bits (165), Expect = 5e-15
 Identities = 22/41 (53%), Positives = 31/41 (75%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
           LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM
Sbjct: 180 LINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLM 220

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* Length = 235

 Score = 78.4 bits (194), Expect = 4e-19
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSH 114
           LI+QL+ GG+LIIPVG     Q L ++ K  DG I       V +VPL  + + W    H
Sbjct: 175 LIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDG-IKIKNHGGVAFVPLIGE-YGWKEHHH 232

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} Length = 227

 Score = 69.6 bits (171), Expect = 8e-16
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
           L+D L   G+LIIP+  + + Q L +I K  +G I +  L  V +V L
Sbjct: 179 LVDLLAENGKLIIPIEEDYT-QVLYEITKK-NGKIIKDRLFDVCFVSL 224

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} Length = 227

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
           L+D L   G+LIIP+  + + Q L +I K  +G I +  L 
Sbjct: 179 LVDLLAENGKLIIPIEEDYT-QVLYEITKK-NGKIIKDRLF 217

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} Length = 215

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
           LI QL+ GG+L++PVG     Q L   +K  D  I       V +VPL  K   + G
Sbjct: 163 LIRQLKDGGKLLMPVGR--YLQRLVLAEKRGDE-IIIKDCGPVAFVPLVGK-EGFQG 215

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 Length = 317

 Score = 69.0 bits (169), Expect = 4e-15
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
              QL+ GGR+I+P+  + S +    + K  D  +     ++  ++      
Sbjct: 161 WFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNL 212

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 Length = 317

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
              QL+ GGR+I+P+  + S +    + K  D  +     +
Sbjct: 161 WFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKL 201

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 Length = 231

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWP 110
             +QL+ GG +I+P+G     Q L ++ K  +   +   L +V++  +    + + 
Sbjct: 151 PYEQLKEGGIMILPIGVGRV-QKLYKVIKKGNS-PSLENLGEVMFGRIGGL-YGFY 203

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 Length = 231

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
             +QL+ GG +I+P+G     Q L ++ K  +      
Sbjct: 151 PYEQLKEGGIMILPIGVGRV-QKLYKVIKKGNSPSLEN 187

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} Length = 210

 Score = 58.4 bits (142), Expect = 9e-12
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLT 103
           L+ QL  GG L++PVG E   Q L+++ +   G      +  V +VPL 
Sbjct: 160 LMTQLDEGGILVLPVGEEH--QYLKRVRRR-GGEFIIDTVEAVRFVPLV 205

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} Length = 210

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 13  LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
           L+ QL  GG L++PVG E   Q L+++ +   G      + 
Sbjct: 160 LMTQLDEGGILVLPVGEEH--QYLKRVRRR-GGEFIIDTVE 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	126
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	98.93
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	98.82
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	98.74
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	98.71
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	98.67
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	98.36
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.75
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.23
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	91.48
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	86.77
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	85.82
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	82.18

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=98.93  E-value=1.5e-09  Score=80.79  Aligned_cols=66  Identities=42%  Similarity=0.725  Sum_probs=60.6

Q ss_pred             EEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEee
Q psy5587          37 EQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL  102 (126)
Q Consensus        37 ~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL  102 (126)
                      .+||.|+++++.+.++..+.++|++||++++++......|.+.+++|..+|+++.+.++++.|+||
T Consensus       162 ~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~p~  227 (227)
T 1r18_A          162 APYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL  227 (227)
T ss_dssp             CSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred             CCccEEEECCchHHHHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEcCCCcEEEEEeccEEEeeC
Confidence            579999999999999999999999999999999865467899999998788899999999999997

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=98.82  E-value=6.2e-09  Score=77.95  Aligned_cols=76  Identities=28%  Similarity=0.261  Sum_probs=64.1

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCCCCc
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGR  112 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~~~~  112 (126)
                      ..+||.|+++.+.+.++..+.++|++||++++++......+.+.+++|. ++.++.+.++++.|+||++....+.+-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~f~p~~~~~~~~~~~  231 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKT-KDGIKIKNHGGVAFVPLIGEYGWKEHH  231 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEE-TTEEEEEEEEEECCCBCBSTTSBC---
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEEe-CCeEEEEEeccEEEEEccCCCcchhhc
Confidence            3469999999999999999999999999999999876434889999995 667999999999999999987655443

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=98.74  E-value=8.1e-09  Score=76.33  Aligned_cols=77  Identities=52%  Similarity=0.798  Sum_probs=65.4

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCCCCc
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGR  112 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~~~~  112 (126)
                      ..+||.|+....++.++..+.++|++||++++++......+.+..+++..++.++.+.++++.|+|+.+...+|..+
T Consensus       149 ~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~~  225 (226)
T 1i1n_A          149 EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQWSRW  225 (226)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBCCCHHHHCCCC
T ss_pred             CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceEEEeccCCccccccc
Confidence            45799999999999999999999999999999998754557777888877788999999999999999874446544

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=98.71  E-value=3.2e-08  Score=72.13  Aligned_cols=69  Identities=25%  Similarity=0.390  Sum_probs=61.6

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQH  107 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~  107 (126)
                      ...||.|+++.+.+.+|+.+.+.|++||++++++..  +.+.+.+++|. ++.+..+.++++.|+||+++..
T Consensus       141 ~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~f~pl~~~~~  209 (210)
T 3lbf_A          141 RAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGE--EHQYLKRVRRR-GGEFIIDTVEAVRFVPLVKGEL  209 (210)
T ss_dssp             GCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECS--SSCEEEEEEEE-TTEEEEEEEEECCCCBCCCSSC
T ss_pred             CCCccEEEEccchhhhhHHHHHhcccCcEEEEEEcC--CceEEEEEEEc-CCeEEEEEeccEEEEEccCccC
Confidence            468999999999999999999999999999999987  45788899997 5679999999999999998753

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=98.67  E-value=1.7e-08  Score=74.65  Aligned_cols=67  Identities=31%  Similarity=0.440  Sum_probs=59.1

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD  104 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~  104 (126)
                      ..+||.|+++++.+.++..+.++|++||++++++... ..|.+.+++| .++.|+.+.++++.|+||++
T Consensus       160 ~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~pl~~  226 (227)
T 2pbf_A          160 LGLFDAIHVGASASELPEILVDLLAENGKLIIPIEED-YTQVLYEITK-KNGKIIKDRLFDVCFVSLKK  226 (227)
T ss_dssp             HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEET-TEEEEEEEEC-SCC-CEEEEEEEECCCBCCC
T ss_pred             CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEccC-CceEEEEEEE-eCCeEEEEEeccEEEEeccC
Confidence            3579999999999999999999999999999999864 4688888888 57789999999999999986

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=98.36  E-value=8.9e-07  Score=64.62  Aligned_cols=71  Identities=30%  Similarity=0.404  Sum_probs=62.0

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWP  110 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~~  110 (126)
                      ...||.|+...+.+.+++.+.+.|++||++++.+... . +.+..+.|. ++.++.+.++++.|+|+++..+ |.
T Consensus       144 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~-~~  214 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRY-L-QRLVLAEKR-GDEIIIKDCGPVAFVPLVGKEG-FQ  214 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSS-S-EEEEEEEEE-TTEEEEEEEEEECCCBCBSTTS-BC
T ss_pred             CCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCC-C-cEEEEEEEe-CCEEEEEEeccEEEEecccccc-CC
Confidence            3579999999999999999999999999999999876 4 888899887 4579999999999999998764 43

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.75  E-value=6.5e-05  Score=55.13  Aligned_cols=75  Identities=20%  Similarity=0.254  Sum_probs=61.8

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEeecCCCCCCCCc
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGR  112 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~~~~~~  112 (126)
                      ...||.|+.......++..+.+.|++||++++..... ..+.+..+.+. ++.+..+.+..+.|+|+....+.|..+
T Consensus       132 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gf~~~~  206 (231)
T 1vbf_A          132 EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVG-RVQKLYKVIKK-GNSPSLENLGEVMFGRIGGLYGFYDDY  206 (231)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSS-SSEEEEEEECC-TTSCEEEEEEEECCCBCCSTTSCSSCC
T ss_pred             CCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEcCC-CccEEEEEEEc-CCeeEEEEeccEEEEEcCCccchhhhc
Confidence            3579999999999999999999999999999998765 45677777775 456888889999999999887765443

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.23  E-value=0.00029  Score=55.06  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=58.0

Q ss_pred             EEEEEEecCceecCccchhhhhhccCCcEEEEEecCCC-CceEEEEEEEcCCCcEEEEEeecEEEEeecCCCC
Q psy5587          36 LEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEG-SAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQH  107 (126)
Q Consensus        36 ~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~-~~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~~~  107 (126)
                      ...||.|++..+.+.++..+.+.|++||++++...... ..+.+..+.+.+ +.+..+.++++.|+|+.+...
T Consensus       142 ~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~~~  213 (317)
T 1dl5_A          142 FSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKD-PYLVGNYKLETRFITAGGNLG  213 (317)
T ss_dssp             GCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEET-TEEEEEEEEECCCCBCCGGGS
T ss_pred             CCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEeC-CcEEEEEeccEEEEEccCccc
Confidence            35799999999999999999999999999999986542 136677777763 469999999999999986543

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=91.48  E-value=0.073  Score=38.73  Aligned_cols=36  Identities=50%  Similarity=0.900  Sum_probs=27.7

Q ss_pred             ccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEe
Q psy5587           7 WGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKN   42 (126)
Q Consensus         7 ~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI   42 (126)
                      ...++.+.++|++||+++++++..+..+....+++.
T Consensus       174 ~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~  209 (227)
T 1r18_A          174 PDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKD  209 (227)
T ss_dssp             SSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEEC
T ss_pred             HHHHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEc
Confidence            345688999999999999999864334667777774

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=86.77  E-value=0.18  Score=40.00  Aligned_cols=36  Identities=8%  Similarity=0.036  Sum_probs=28.9

Q ss_pred             EEEEEEecCceecC---ccchhhhhhccCCcEEEEEecC
Q psy5587          36 LEQIDKNLDGTITR---TPLMQLIDQLRPGGRLIIPVGP   71 (126)
Q Consensus        36 ~~~fDrI~v~~av~---~iP~~ll~QL~~GGrlvvPl~~   71 (126)
                      ...||.|++.+.++   .+.+.+.++|++||++++....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            46799998876665   4677889999999999987643

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=85.82  E-value=0.29  Score=34.69  Aligned_cols=55  Identities=22%  Similarity=0.218  Sum_probs=38.2

Q ss_pred             cccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           6 FWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         6 ~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      +...++.+.++|++||+++++++. + .+....+.+.....          ..-..+++.|+|+.++
T Consensus       153 ~~~~~~~~~~~L~pgG~lv~~~~~-~-~~~~~~~~~~~~~~----------~~~~~~~~~f~pl~~~  207 (210)
T 3lbf_A          153 PPEIPTALMTQLDEGGILVLPVGE-E-HQYLKRVRRRGGEF----------IIDTVEAVRFVPLVKG  207 (210)
T ss_dssp             CSSCCTHHHHTEEEEEEEEEEECS-S-SCEEEEEEEETTEE----------EEEEEEECCCCBCCCS
T ss_pred             hhhhhHHHHHhcccCcEEEEEEcC-C-ceEEEEEEEcCCeE----------EEEEeccEEEEEccCc
Confidence            345567899999999999999985 3 46677777753222          3444567777777653

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=82.18  E-value=0.74  Score=33.48  Aligned_cols=56  Identities=38%  Similarity=0.487  Sum_probs=36.1

Q ss_pred             ccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           7 WGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         7 ~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      ...++.+.++|++||+++++.+.....+....+.+.-.+.          +......+.|+|+...
T Consensus       169 ~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~f~p~~~~  224 (235)
T 1jg1_A          169 PKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGI----------KIKNHGGVAFVPLIGE  224 (235)
T ss_dssp             SSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEETTEE----------EEEEEEEECCCBCBST
T ss_pred             HHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEEeCCeE----------EEEEeccEEEEEccCC
Confidence            3456789999999999999998543225666666632111          2333456677777643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	126
d1i1na_	224	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	2e-17
d1r18a_	223	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	9e-14
d1r18a_	223	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	2e-09
d1dl5a1	213	c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methylt	1e-10
d1dl5a1	213	c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methylt	2e-07
d1jg1a_	215	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	3e-10
d1jg1a_	215	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	2e-06
d1vbfa_	224	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	4e-09
d1vbfa_	224	c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransf	3e-05
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	0.002

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 2e-17
 Identities = 37/55 (67%), Positives = 42/55 (76%)

Query: 56  IDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWP 110
           IDQL+PGGRLI+PVGP G  Q LEQ DK  DG+I   PLM V+YVPLTDK+ QW 
Sbjct: 168 IDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQWS 222

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 223

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 62.9 bits (152), Expect = 9e-14
 Identities = 27/49 (55%), Positives = 38/49 (77%)

Query: 54  QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
           +LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM V+YVPL
Sbjct: 175 ELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 223

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 223

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 22/42 (52%), Positives = 32/42 (76%)

Query: 12  KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
           +LI+QL  GGRLI+PVGP+G +Q ++Q DK+ +G +  T LM
Sbjct: 175 ELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLM 216

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 213

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

 Score = 54.6 bits (130), Expect = 1e-10
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
              QL+ GGR+I+P+  + S +    + K  D  +     ++  ++  
Sbjct: 161 WFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITA 208

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 213

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 12  KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
               QL+ GGR+I+P+  + S +    + K  D  +     +
Sbjct: 160 TWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKL 201

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 215

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 53.3 bits (127), Expect = 3e-10
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 55  LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
           LI+QL+ GG+LIIPVG     Q L ++ K  DG I       V +VPL  + 
Sbjct: 162 LIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDG-IKIKNHGGVAFVPLIGEY 212

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 215

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 42.5 bits (99), Expect = 2e-06
 Identities = 17/39 (43%), Positives = 23/39 (58%)

Query: 12  KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
            LI+QL+ GG+LIIPVG     Q L ++ K  DG   + 
Sbjct: 161 PLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKN 199

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} Length = 224

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

 Score = 50.2 bits (119), Expect = 4e-09
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 56  IDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPGRSHE 115
            +QL+ GG +I+P+G     Q L ++ K    + +   L +V++  +      +      
Sbjct: 152 YEQLKEGGIMILPIGVGRV-QKLYKVIKK-GNSPSLENLGEVMFGRIGGLYGFYDDYDDI 209

Query: 116 VCRFK 120
             R  
Sbjct: 210 EFRVN 214

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} Length = 224

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 14  IDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
            +QL+ GG +I+P+G     Q L ++ K    + +   L 
Sbjct: 152 YEQLKEGGIMILPIGVGRV-QKLYKVIKK-GNSPSLENLG 189

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 3/54 (5%)

Query: 37 EQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTIT 90
            ID++  G I    L   +    P  R    +    +   L   DK+ DG I 
Sbjct: 47 YVIDQDKSGFIEEDELKLFLQNFSPSAR---ALTDAETKAFLADGDKDGDGMIG 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	126
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	99.62
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	99.6
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	99.59
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	99.59
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	99.18
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.35
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.22
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.22
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.11
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	94.44

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.62  E-value=3.1e-16  Score=118.37  Aligned_cols=96  Identities=26%  Similarity=0.305  Sum_probs=78.0

Q ss_pred             hHHHHhhcCCCc-EEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCc
Q psy5587          10 QSKLIDQLRPGG-RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGT   88 (126)
Q Consensus        10 p~~LleQL~~~G-~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~   88 (126)
                      +...++.+.... .++..++..+. ...++||+|++++|++.+|+.|++||++||+|++|++.....|.+++++|.++ .
T Consensus       117 a~~~l~~~g~~nv~~~~gd~~~g~-~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~pv~~~~~~q~l~~~~k~~~-~  194 (215)
T d1jg1a_         117 AKRNLERAGVKNVHVILGDGSKGF-PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKD-G  194 (215)
T ss_dssp             HHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEETT-E
T ss_pred             HHHHHHHcCCceeEEEECccccCC-cccCcceeEEeecccccCCHHHHHhcCCCCEEEEEEccCCccEEEEEEEEECC-E
Confidence            445566666444 44555554443 66889999999999999999999999999999999988756688999999854 5


Q ss_pred             EEEEEeecEEEEeecCCCC
Q psy5587          89 ITRTPLMQVVYVPLTDKQH  107 (126)
Q Consensus        89 ~~~~~l~~v~fvPL~~~~~  107 (126)
                      ++.+.+++|+||||.+..+
T Consensus       195 ~~~~~l~~v~fvPl~g~~~  213 (215)
T d1jg1a_         195 IKIKNHGGVAFVPLIGEYG  213 (215)
T ss_dssp             EEEEEEEEECCCBCBSTTS
T ss_pred             EEEEEEccEEEEcCCCccc
Confidence            9999999999999997654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=99.60  E-value=5.7e-16  Score=117.49  Aligned_cols=87  Identities=22%  Similarity=0.284  Sum_probs=71.7

Q ss_pred             EEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEe
Q psy5587          22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVP  101 (126)
Q Consensus        22 ~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvP  101 (126)
                      .++..++..+. ...++||+|+++++++.+|+.|++||++||+||+|++.. ..|.+++++|.+ +.++.+.+++|+|+|
T Consensus       119 ~~~~~d~~~g~-~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pvg~~-~~q~l~~i~k~~-~~~~~~~l~~v~F~p  195 (224)
T d1vbfa_         119 KLILGDGTLGY-EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVG-RVQKLYKVIKKG-NSPSLENLGEVMFGR  195 (224)
T ss_dssp             EEEESCGGGCC-GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSS-SSEEEEEEECCT-TSCEEEEEEEECCCB
T ss_pred             ccccCchhhcc-hhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEEcCC-CceEEEEEEEEC-CceEEEEeeeEEEEE
Confidence            34444443343 456899999999999999999999999999999999975 679999999975 469999999999999


Q ss_pred             ecCCCCCCCC
Q psy5587         102 LTDKQHQWPG  111 (126)
Q Consensus       102 L~~~~~~~~~  111 (126)
                      |.|..+.+..
T Consensus       196 l~g~~G~~~~  205 (224)
T d1vbfa_         196 IGGLYGFYDD  205 (224)
T ss_dssp             CCSTTSCSSC
T ss_pred             CCCcccCCcC
Confidence            9997764343

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.59  E-value=4.4e-16  Score=117.81  Aligned_cols=79  Identities=38%  Similarity=0.638  Sum_probs=68.5

Q ss_pred             EEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEee
Q psy5587          23 LIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL  102 (126)
Q Consensus        23 lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL  102 (126)
                      ++..++..++ ...++||+|+++++++++|+.|++||++||++|+|++...+.|.+++++|+++|.++.+.+++|+||||
T Consensus       145 ~~~~d~~~~~-~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg~~~~~q~l~~i~k~~~g~~~~~~l~~v~FvPL  223 (223)
T d1r18a_         145 IVEGDGRKGY-PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL  223 (223)
T ss_dssp             EEESCGGGCC-GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred             EEeccccccc-ccccceeeEEEEeechhchHHHHHhcCCCcEEEEEEecCCCcEEEEEEEEeCCCcEEEEEEeeEEeecC
Confidence            3445554443 456799999999999999999999999999999999876567899999999888999999999999997

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.7e-16  Score=117.89  Aligned_cols=88  Identities=49%  Similarity=0.758  Sum_probs=74.3

Q ss_pred             EEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCCceEEEEEEEcCCCcEEEEEeecEEEEee
Q psy5587          23 LIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL  102 (126)
Q Consensus        23 lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~~q~l~~~~r~~~g~~~~~~l~~v~fvPL  102 (126)
                      ++..++..+. ...++||+|+++++++++|++|++||++||++|+|++.....|.+++++|.+++.++.+.+++|+|+||
T Consensus       136 ~~~gD~~~~~-~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv~~~~~~q~l~~~~k~~~~~~~~~~l~~v~fvPl  214 (224)
T d1i1na_         136 LVVGDGRMGY-AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPL  214 (224)
T ss_dssp             EEESCGGGCC-GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBC
T ss_pred             EEEeeccccc-chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEEEccCCCcEEEEEEEEeCCCeEEEEEEeeEEEECC
Confidence            3444443332 456789999999999999999999999999999999876567889999998788899999999999999


Q ss_pred             cCCCCCCCC
Q psy5587         103 TDKQHQWPG  111 (126)
Q Consensus       103 ~~~~~~~~~  111 (126)
                      ++.+.+|..
T Consensus       215 ~~~~~~~~~  223 (224)
T d1i1na_         215 TDKEKQWSR  223 (224)
T ss_dssp             CCHHHHCCC
T ss_pred             CCchhhccC
Confidence            998877753

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.18  E-value=7.7e-12  Score=92.86  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=59.1

Q ss_pred             ceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCC-ceEEEEEEEcCCCcEEEEEeecEEEEeecCC
Q psy5587          34 QSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGS-AQNLEQIDKNLDGTITRTPLMQVVYVPLTDK  105 (126)
Q Consensus        34 ~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~-~q~l~~~~r~~~g~~~~~~l~~v~fvPL~~~  105 (126)
                      ....+||+|+++++++.+|+.|++||++||++++|++.... .+.++.+++. ++.+..+.+++++|+||.+.
T Consensus       140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~pv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Fvpl~g~  211 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKK-DPYLVGNYKLETRFITAGGN  211 (213)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEE-TTEEEEEEEEECCCCBCCGG
T ss_pred             ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEEECccCCcEEEEEEEEEe-CCeEEEEEEeeEEEEECCCC
Confidence            34567999999999999999999999999999999975432 3556666665 66799999999999999875

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.35  E-value=4.3e-05  Score=56.24  Aligned_cols=59  Identities=36%  Similarity=0.429  Sum_probs=44.3

Q ss_pred             ccccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCC
Q psy5587           5 SFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEG   73 (126)
Q Consensus         5 ~~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~   73 (126)
                      +.+..|+.|++||++||+||+|++.....+....+++.-.+.          ..-..+++.|+|+.+..
T Consensus       154 a~~~ip~~l~~qL~~gGrLv~pv~~~~~~q~l~~~~k~~~~~----------~~~~l~~v~fvPl~g~~  212 (215)
T d1jg1a_         154 GAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGI----------KIKNHGGVAFVPLIGEY  212 (215)
T ss_dssp             BBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEETTEE----------EEEEEEEECCCBCBSTT
T ss_pred             ccccCCHHHHHhcCCCCEEEEEEccCCccEEEEEEEEECCEE----------EEEEEccEEEEcCCCcc
Confidence            345679999999999999999998755456777787754433          34456788899987653

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.22  E-value=4.7e-05  Score=56.11  Aligned_cols=56  Identities=39%  Similarity=0.746  Sum_probs=41.3

Q ss_pred             ccccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEe
Q psy5587           5 SFWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPV   69 (126)
Q Consensus         5 ~~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl   69 (126)
                      +.+-.|+.|++||++||+||+|++..+..|....++|.-.+.         ++....+++.|+|+
T Consensus       168 a~~~~p~~l~~~Lk~gG~lV~pvg~~~~~q~l~~i~k~~~g~---------~~~~~l~~v~FvPL  223 (223)
T d1r18a_         168 AAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGK---------VEMTRLMGVMYVPL  223 (223)
T ss_dssp             CBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSC---------EEEEEEEEECCCCC
T ss_pred             echhchHHHHHhcCCCcEEEEEEecCCCcEEEEEEEEeCCCc---------EEEEEEeeEEeecC
Confidence            346689999999999999999999655557788899975432         13444566667664

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=5.4e-05  Score=55.58  Aligned_cols=57  Identities=47%  Similarity=0.700  Sum_probs=43.9

Q ss_pred             ccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCC
Q psy5587           7 WGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPE   72 (126)
Q Consensus         7 ~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~   72 (126)
                      .-.|+.|++||++||+||+|++.....|....|+|.-.+.         +.....+++.|+|+.+.
T Consensus       161 ~~ip~~l~~~LkpGG~LV~pv~~~~~~q~l~~~~k~~~~~---------~~~~~l~~v~fvPl~~~  217 (224)
T d1i1na_         161 PVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGS---------IKMKPLMGVIYVPLTDK  217 (224)
T ss_dssp             SSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSC---------EEEEEEEEECCCBCCCH
T ss_pred             hhcCHHHHhhcCCCcEEEEEEccCCCcEEEEEEEEeCCCe---------EEEEEEeeEEEECCCCc
Confidence            4578999999999999999998755556778888864432         24556778899998753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.11  E-value=8.5e-05  Score=54.88  Aligned_cols=58  Identities=22%  Similarity=0.226  Sum_probs=42.3

Q ss_pred             cccChHHHHhhcCCCcEEEEeecCCCCcceEEEEEEecCceecCccchhhhhhccCCcEEEEEecCCCC
Q psy5587           6 FWGNQSKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGS   74 (126)
Q Consensus         6 ~~~~p~~LleQL~~~G~lv~pvg~~g~~~~~~~fDrI~v~~av~~iP~~ll~QL~~GGrlvvPl~~~~~   74 (126)
                      ..-.|+.|++||++||+||+|+|.+ ..|.+..+.|.-.+.          ..-..+.+.|+|+.+.++
T Consensus       144 ~~~ip~~l~~qLk~GGrLV~pvg~~-~~q~l~~i~k~~~~~----------~~~~l~~v~F~pl~g~~G  201 (224)
T d1vbfa_         144 APTLLCKPYEQLKEGGIMILPIGVG-RVQKLYKVIKKGNSP----------SLENLGEVMFGRIGGLYG  201 (224)
T ss_dssp             BSSCCHHHHHTEEEEEEEEEEECSS-SSEEEEEEECCTTSC----------EEEEEEEECCCBCCSTTS
T ss_pred             hhhhhHHHHHhcCCCCEEEEEEcCC-CceEEEEEEEECCce----------EEEEeeeEEEEECCCccc
Confidence            3457899999999999999999964 457788888754332          223346788999876543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.44  E-value=0.0034  Score=45.04  Aligned_cols=26  Identities=27%  Similarity=0.493  Sum_probs=22.4

Q ss_pred             ccccChHHHHhhcCCCcEEEEeecCC
Q psy5587           5 SFWGNQSKLIDQLRPGGRLIIPVGPE   30 (126)
Q Consensus         5 ~~~~~p~~LleQL~~~G~lv~pvg~~   30 (126)
                      +++..|+.+++||++||+|++|++..
T Consensus       153 ~~~~~p~~l~~~LkpGG~lv~pv~~~  178 (213)
T d1dl5a1         153 GVDEVPETWFTQLKEGGRVIVPINLK  178 (213)
T ss_dssp             BBSCCCHHHHHHEEEEEEEEEEBCBG
T ss_pred             cHHHhHHHHHHhcCCCcEEEEEECcc
Confidence            35667899999999999999999754