Psyllid ID: psy5592
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 257 | ||||||
| 156554220 | 675 | PREDICTED: protein peanut-like [Nasonia | 0.933 | 0.355 | 0.756 | 1e-103 | |
| 91078628 | 590 | PREDICTED: similar to AGAP007596-PA [Tri | 0.992 | 0.432 | 0.729 | 1e-101 | |
| 332018507 | 391 | Protein peanut [Acromyrmex echinatior] | 0.933 | 0.613 | 0.744 | 1e-100 | |
| 307170293 | 428 | Protein peanut [Camponotus floridanus] | 0.933 | 0.560 | 0.744 | 2e-99 | |
| 383854356 | 707 | PREDICTED: protein peanut-like [Megachil | 0.933 | 0.339 | 0.708 | 6e-98 | |
| 380025913 | 712 | PREDICTED: protein peanut-like [Apis flo | 0.933 | 0.337 | 0.708 | 1e-97 | |
| 328788421 | 712 | PREDICTED: protein peanut [Apis mellifer | 0.933 | 0.337 | 0.708 | 1e-97 | |
| 340714570 | 711 | PREDICTED: protein peanut-like [Bombus t | 0.933 | 0.337 | 0.704 | 2e-97 | |
| 350411154 | 711 | PREDICTED: protein peanut-like [Bombus i | 0.933 | 0.337 | 0.704 | 2e-97 | |
| 307192563 | 394 | Protein peanut [Harpegnathos saltator] | 0.933 | 0.609 | 0.723 | 6e-97 |
| >gi|156554220|ref|XP_001600879.1| PREDICTED: protein peanut-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/250 (75%), Positives = 211/250 (84%), Gaps = 10/250 (4%)
Query: 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFN 60
MQRLHDKVNIIPVIAKADTMTP+ECA FKKQIL+EIAQHKI+IY+FP ED SK +
Sbjct: 411 MQRLHDKVNIIPVIAKADTMTPDECAYFKKQILNEIAQHKIKIYEFPEAEDEED--SKLH 468
Query: 61 KNLRDRVPFAVVGSNTVVEIDGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDL 120
K LRDRVPFA+VG+NTV+E DGKKVRGRKYPWG+ EVENLEH DFIALRNM+IRT+LQDL
Sbjct: 469 KVLRDRVPFAIVGANTVIEHDGKKVRGRKYPWGVVEVENLEHNDFIALRNMIIRTHLQDL 528
Query: 121 KDVTSNVHYENFRCRKLAGLGTDGKP-RLLNKNPLAQMEEEKREHEAKMKKMEVDMEQVF 179
KDVT+NVHYENFRCR LAGL DGKP R+ NKNPLAQMEEEKREHE KMKKME++MEQVF
Sbjct: 529 KDVTNNVHYENFRCRTLAGLSVDGKPTRVSNKNPLAQMEEEKREHENKMKKMEIEMEQVF 588
Query: 180 EMKVKEKKQKLKDSEID-------MKKSLEAQIKELEEKRRGLELEISQWEQSNGVSMDE 232
EMKV+EK+QKLKD E D M++SLE Q KELEEKRR E E S WEQ G S++E
Sbjct: 589 EMKVREKRQKLKDLETDLQRRHEQMRRSLEQQAKELEEKRRAFEGERSGWEQQTGHSIEE 648
Query: 233 LRRRSLERDS 242
LRRRSLE +S
Sbjct: 649 LRRRSLEANS 658
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91078628|ref|XP_966496.1| PREDICTED: similar to AGAP007596-PA [Tribolium castaneum] gi|270004061|gb|EFA00509.1| hypothetical protein TcasGA2_TC003373 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|332018507|gb|EGI59097.1| Protein peanut [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|307170293|gb|EFN62648.1| Protein peanut [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|383854356|ref|XP_003702687.1| PREDICTED: protein peanut-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|380025913|ref|XP_003696708.1| PREDICTED: protein peanut-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|328788421|ref|XP_001121636.2| PREDICTED: protein peanut [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|340714570|ref|XP_003395800.1| PREDICTED: protein peanut-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350411154|ref|XP_003489256.1| PREDICTED: protein peanut-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|307192563|gb|EFN75751.1| Protein peanut [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 257 | ||||||
| FB|FBgn0013726 | 539 | pnut "peanut" [Drosophila mela | 0.894 | 0.426 | 0.596 | 4.9e-69 | |
| UNIPROTKB|F1NIP9 | 415 | SEPT7 "Uncharacterized protein | 0.785 | 0.486 | 0.583 | 1.6e-61 | |
| UNIPROTKB|F1MBT8 | 419 | SEPT7 "Septin-7" [Bos taurus ( | 0.785 | 0.482 | 0.583 | 1.6e-61 | |
| UNIPROTKB|F1MIH2 | 437 | SEPT7 "Septin-7" [Bos taurus ( | 0.785 | 0.462 | 0.583 | 1.6e-61 | |
| UNIPROTKB|Q6Q137 | 437 | SEPT7 "Septin-7" [Bos taurus ( | 0.785 | 0.462 | 0.583 | 1.6e-61 | |
| UNIPROTKB|F1Q067 | 384 | SEPT7 "Uncharacterized protein | 0.785 | 0.526 | 0.583 | 1.6e-61 | |
| UNIPROTKB|B4DNE4 | 382 | SEPT7 "Septin-7" [Homo sapiens | 0.785 | 0.528 | 0.583 | 1.6e-61 | |
| UNIPROTKB|E7EPK1 | 436 | SEPT7 "Septin-7" [Homo sapiens | 0.785 | 0.463 | 0.583 | 1.6e-61 | |
| UNIPROTKB|E7ES33 | 436 | SEPT7 "Septin-7" [Homo sapiens | 0.785 | 0.463 | 0.583 | 1.6e-61 | |
| UNIPROTKB|G3V1Q4 | 384 | SEPT7 "Septin 7, isoform CRA_a | 0.785 | 0.526 | 0.583 | 1.6e-61 |
| FB|FBgn0013726 pnut "peanut" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 142/238 (59%), Positives = 168/238 (70%)
Query: 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFN 60
MQ L DKVN++PVIAKADTMTP+E LFKKQIL+EIAQHKI+IY FP + +K
Sbjct: 273 MQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKIKIYDFPATLEDAAEEAKTT 332
Query: 61 KNLRDRVPFAVVGSNTVVEIDGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDL 120
+NLR RVPFAVVG+NT++E DGKKVRGR+YPWG+ EVENL HCDFIALRNM+IRT+LQDL
Sbjct: 333 QNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDL 392
Query: 121 KDVTSNVHYENFRCRKLAGLG-TDGKPRLLNKNPLAQMEEEKREHEAKMKKMEVDXXXXX 179
KDVT+NVHYEN+RCRKL+ LG DGK RL NKNPL QMEEEKREHE KMKKME +
Sbjct: 393 KDVTNNVHYENYRCRKLSELGLVDGKARLSNKNPLTQMEEEKREHEQKMKKMEAEMEQVF 452
Query: 180 XXXXXXXXXXXXDSEIDM-------KKSLEAQIXXXXXXXXXXXXXISQWEQSNGVSM 230
DSE+++ KK+LE QI +WE N V++
Sbjct: 453 DMKVKEKMQKLRDSELELARRHEERKKALELQIRELEEKRREFEREKKEWEDVNHVTL 510
|
|
| UNIPROTKB|F1NIP9 SEPT7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MBT8 SEPT7 "Septin-7" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MIH2 SEPT7 "Septin-7" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6Q137 SEPT7 "Septin-7" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1Q067 SEPT7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4DNE4 SEPT7 "Septin-7" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E7EPK1 SEPT7 "Septin-7" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E7ES33 SEPT7 "Septin-7" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3V1Q4 SEPT7 "Septin 7, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 257 | |||
| pfam00735 | 280 | pfam00735, Septin, Septin | 2e-74 | |
| cd01850 | 275 | cd01850, CDC_Septin, CDC/Septin GTPase family | 7e-73 | |
| COG5019 | 373 | COG5019, CDC3, Septin family protein [Cell divisio | 6e-65 |
| >gnl|CDD|201420 pfam00735, Septin, Septin | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-74
Identities = 88/141 (62%), Positives = 111/141 (78%)
Query: 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFN 60
M++LH+KVNIIPVIAKADT+TP+E FKK+I +EI + I+IY FP S ED+ +
Sbjct: 135 MKKLHEKVNIIPVIAKADTLTPDELQRFKKRIRAEIERQNIKIYHFPDEESDEDEEKEQT 194
Query: 61 KNLRDRVPFAVVGSNTVVEIDGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDL 120
+ L+ +PFA+VGSNT +E DGKKVRGRKYPWG+ EVEN HCDF+ LRNMLIRT+LQDL
Sbjct: 195 EQLKSSIPFAIVGSNTEIENDGKKVRGRKYPWGVVEVENPSHCDFLKLRNMLIRTHLQDL 254
Query: 121 KDVTSNVHYENFRCRKLAGLG 141
K+VT +HYEN+R KL+ LG
Sbjct: 255 KEVTHELHYENYRSEKLSALG 275
|
Members of this family include CDC3, CDC10, CDC11 and CDC12/Septin. Members of this family bind GTP. As regards the septins, these are polypeptides of 30-65kDa with three characteristic GTPase motifs (G-1, G-3 and G-4) that are similar to those of the Ras family. The G-4 motif is strictly conserved with a unique septin consensus of AKAD. Most septins are thought to have at least one coiled-coil region, which in some cases is necessary for intermolecular interactions that allow septins to polymerise to form rod-shaped complexes. In turn, these are arranged into tandem arrays to form filaments. They are multifunctional proteins, with roles in cytokinesis, sporulation, germ cell development, exocytosis and apoptosis. Length = 280 |
| >gnl|CDD|206649 cd01850, CDC_Septin, CDC/Septin GTPase family | Back alignment and domain information |
|---|
| >gnl|CDD|227352 COG5019, CDC3, Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 257 | |||
| KOG3859|consensus | 406 | 100.0 | ||
| COG5019 | 373 | CDC3 Septin family protein [Cell division and chro | 100.0 | |
| KOG2655|consensus | 366 | 100.0 | ||
| PF00735 | 281 | Septin: Septin; InterPro: IPR000038 Septins consti | 100.0 | |
| KOG1547|consensus | 336 | 100.0 | ||
| cd01850 | 276 | CDC_Septin CDC/Septin. Septins are a conserved fam | 100.0 | |
| cd04165 | 224 | GTPBP1_like GTPBP1-like. Mammalian GTP binding pro | 85.07 | |
| cd01876 | 170 | YihA_EngB The YihA (EngB) subfamily. This subfamil | 81.06 | |
| cd04104 | 197 | p47_IIGP_like p47 (47-kDa) family. The p47 GTPase | 80.67 | |
| KOG0804|consensus | 493 | 80.63 | ||
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 80.54 |
| >KOG3859|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-64 Score=461.93 Aligned_cols=222 Identities=42% Similarity=0.727 Sum_probs=210.1
Q ss_pred CCCcCCCcceeeeeecCCCCCHHHHHHHHHHHHHHHHhCCCccccCCCCCCCChhhhHhhhhhhcCCCeeEeecCeeeee
Q psy5592 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFNKNLRDRVPFAVVGSNTVVEI 80 (257)
Q Consensus 1 MK~L~~rVNIIPVIaKADtLT~~El~~fK~~I~~~l~~~~I~iy~fp~~~~dd~e~~~~~~~l~~~~PFAVVgS~~~~~~ 80 (257)
||+|.++||||||||||||.+.+||+.||..|+.+|..|||+||+||. ||+..++.|..++..+|||||||++.+.+
T Consensus 170 mk~LdskVNIIPvIAKaDtisK~eL~~FK~kimsEL~sngv~IYqfPt---Ddetva~~N~~mn~~lPFAVvGSte~vKv 246 (406)
T KOG3859|consen 170 MKKLDSKVNIIPVIAKADTISKEELKRFKIKIMSELVSNGVQIYQFPT---DDETVAKANSEMNHSLPFAVVGSTEEVKV 246 (406)
T ss_pred HHHHhhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCceeeeccc---hHHHHHHHHHHhhcCCceeEecchHhhhh
Confidence 789999999999999999999999999999999999999999999998 56677889999999999999999999999
Q ss_pred CCeeeecccCCceeeeecCCccCchHHHHHHHHHhhHHHHHHhhhhhhHHHhHHHHhhcCCCCCCCCCCCCCch---hhH
Q psy5592 81 DGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDLKDVTSNVHYENFRCRKLAGLGTDGKPRLLNKNPL---AQM 157 (257)
Q Consensus 81 ~g~~vrgR~YpWG~veVeN~~HcDF~~LR~~Li~thl~dLkd~T~~~~YE~YRt~kL~~~~~~~~~~~~~~~p~---~~~ 157 (257)
+|++|++|+||||+|.|+|+.||||++||.|||+|+|+||++.||..|||.||+++|..||+.+.+ +++.|+ ..+
T Consensus 247 gnkmvraRqyPwG~v~vENE~HCDFVKLREmLirtNmedlReqTHtrhYElyRr~kL~~Mgf~dv~--~~~~p~s~qet~ 324 (406)
T KOG3859|consen 247 GNKMVKARQYPWGTVQVENELHCDFVKLREMLIRTNMEDLREQTHTRHYELYRRCKLEEMGFKDVD--PDNKPFSLQETY 324 (406)
T ss_pred hhhhhhhccCCCCceeecchhhhHHHHHHHHHccccHHHHhhhccccchHHHHHHHHHHcCCccCC--CCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997654 345554 478
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q psy5592 158 EEEKREHEAKMKKMEVDMEQVFEMKVKEKKQKLKDSEID-------MKKSLEAQIKELEEKRRGLELEISQWEQSNG 227 (257)
Q Consensus 158 eee~~~~~~kl~k~E~em~~vF~~kv~eke~kl~~~e~e-------~~~~l~~q~~~leek~~~le~e~~~~~~~~~ 227 (257)
|+.+.+|...+++.|++|+|+|+++|++||..|+++|.+ +++.++++.++||+++++|++|..+|.+.+.
T Consensus 325 eaKr~e~~~e~qrkEee~rqmFvqrvkekE~elke~Ekel~~kf~~lkr~h~eEk~kle~~rr~Leee~~~f~~rk~ 401 (406)
T KOG3859|consen 325 EAKRNEFLGELQRKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKRLHQEEKKKLEEKRKQLEEEVNAFQRRKT 401 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 8888999999999999999999999998764
|
|
| >COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2655|consensus | Back alignment and domain information |
|---|
| >PF00735 Septin: Septin; InterPro: IPR000038 Septins constitute a eukaryotic family of guanine nucleotide-binding proteins, most of which polymerise to form filaments [] | Back alignment and domain information |
|---|
| >KOG1547|consensus | Back alignment and domain information |
|---|
| >cd01850 CDC_Septin CDC/Septin | Back alignment and domain information |
|---|
| >cd04165 GTPBP1_like GTPBP1-like | Back alignment and domain information |
|---|
| >cd01876 YihA_EngB The YihA (EngB) subfamily | Back alignment and domain information |
|---|
| >cd04104 p47_IIGP_like p47 (47-kDa) family | Back alignment and domain information |
|---|
| >KOG0804|consensus | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 257 | ||||
| 2qag_C | 418 | Crystal Structure Of Human Septin Trimer 267 Length | 1e-62 | ||
| 3tw4_A | 271 | Crystal Structure Of Human Septin 7 Gtpase Domain L | 9e-55 | ||
| 3t5d_A | 274 | Crystal Structure Of Septin 7 In Complex With Gdp L | 1e-54 | ||
| 2qag_A | 361 | Crystal Structure Of Human Septin Trimer 267 Length | 3e-39 | ||
| 3ftq_A | 274 | Crystal Structure Of Septin 2 In Complex With Gppnh | 2e-38 | ||
| 2qnr_A | 301 | Human Septin 2 In Complex With Gdp Length = 301 | 9e-37 | ||
| 2qa5_A | 315 | Crystal Structure Of Sept2 G-Domain Length = 315 | 1e-36 | ||
| 3sop_A | 270 | Crystal Structure Of Human Septin 3 Gtpase Domain L | 1e-33 | ||
| 2qag_B | 427 | Crystal Structure Of Human Septin Trimer 267 Length | 2e-33 |
| >pdb|2QAG|C Chain C, Crystal Structure Of Human Septin Trimer 267 Length = 418 | Back alignment and structure |
|
| >pdb|3TW4|A Chain A, Crystal Structure Of Human Septin 7 Gtpase Domain Length = 271 | Back alignment and structure |
| >pdb|3T5D|A Chain A, Crystal Structure Of Septin 7 In Complex With Gdp Length = 274 | Back alignment and structure |
| >pdb|2QAG|A Chain A, Crystal Structure Of Human Septin Trimer 267 Length = 361 | Back alignment and structure |
| >pdb|3FTQ|A Chain A, Crystal Structure Of Septin 2 In Complex With Gppnhp And Mg2+ Length = 274 | Back alignment and structure |
| >pdb|2QNR|A Chain A, Human Septin 2 In Complex With Gdp Length = 301 | Back alignment and structure |
| >pdb|2QA5|A Chain A, Crystal Structure Of Sept2 G-Domain Length = 315 | Back alignment and structure |
| >pdb|3SOP|A Chain A, Crystal Structure Of Human Septin 3 Gtpase Domain Length = 270 | Back alignment and structure |
| >pdb|2QAG|B Chain B, Crystal Structure Of Human Septin Trimer 267 Length = 427 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 257 | |||
| 2qag_B | 427 | Septin-6, protein NEDD5; cell cycle, cell division | 3e-69 | |
| 2qag_C | 418 | Septin-7; cell cycle, cell division, GTP-binding, | 5e-67 | |
| 2qag_A | 361 | Septin-2, protein NEDD5; cell cycle, cell division | 1e-52 | |
| 3t5d_A | 274 | Septin-7; GTP-binding protein, cytoskeleton, signa | 2e-50 | |
| 2qnr_A | 301 | Septin-2, protein NEDD5; structural genomics conso | 2e-44 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-05 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 5e-05 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 3e-05 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 1e-04 |
| >2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 427 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 3e-69
Identities = 94/261 (36%), Positives = 155/261 (59%), Gaps = 12/261 (4%)
Query: 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFN 60
M++L KVNIIP+IAKAD ++ E FK +I SE+ + ++IYQFP + ++ ++ N
Sbjct: 170 MKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFP---TDDESVAEIN 226
Query: 61 KNLRDRVPFAVVGSNTVVEIDGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDL 120
+ +PFAV+GS ++I K +R R+YPWG +VEN HCDF+ LR MLIR N++DL
Sbjct: 227 GTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRVNMEDL 286
Query: 121 KDVTSNVHYENFRCRKLAGLG-TDGKPRLLNKNPLAQMEEEKREHEAKMKKMEVDMEQVF 179
++ T HYE +R KL +G D P + E ++ E +++K E +M Q+F
Sbjct: 287 REQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMF 346
Query: 180 EMKVKEKKQKLKDSEID-------MKKSLEAQIKELEEKRRGLELEISQWEQSNGVSMDE 232
+VKEK+ +LK++E + +KK + + K+LE+K++ L+ E++ ++Q + +
Sbjct: 347 VQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRK-TAAEL 405
Query: 233 LRRRSLERDSSLDGKEKKVKK 253
L+ + + S K K KK
Sbjct: 406 LQSQGSQAGGSQTLKRDKEKK 426
|
| >2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
| >2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 361 | Back alignment and structure |
|---|
| >3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A* Length = 274 | Back alignment and structure |
|---|
| >2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Length = 301 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 257 | |||
| 2qag_B | 427 | Septin-6, protein NEDD5; cell cycle, cell division | 100.0 | |
| 2qag_C | 418 | Septin-7; cell cycle, cell division, GTP-binding, | 100.0 | |
| 3sop_A | 270 | Neuronal-specific septin-3; hydrolase; HET: GDP; 2 | 100.0 | |
| 2qnr_A | 301 | Septin-2, protein NEDD5; structural genomics conso | 100.0 | |
| 2qag_A | 361 | Septin-2, protein NEDD5; cell cycle, cell division | 100.0 | |
| 3t5d_A | 274 | Septin-7; GTP-binding protein, cytoskeleton, signa | 100.0 | |
| 1h65_A | 270 | Chloroplast outer envelope protein OEP34; GTPase, | 98.03 | |
| 1wf3_A | 301 | GTP-binding protein; GTPase, riken structural geno | 96.72 | |
| 1nrj_B | 218 | SR-beta, signal recognition particle receptor beta | 88.97 | |
| 3s9g_A | 104 | Protein hexim1; cyclin T-binding domain (TBD), cyc | 83.88 |
| >2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-63 Score=478.99 Aligned_cols=235 Identities=37% Similarity=0.652 Sum_probs=109.2
Q ss_pred CCCcCCCcceeeeeecCCCCCHHHHHHHHHHHHHHHHhCCCccccCCCCCCCChhhhHhhhhhhcCCCeeEeecCeeeee
Q psy5592 1 MQRLHDKVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFNKNLRDRVPFAVVGSNTVVEI 80 (257)
Q Consensus 1 MK~L~~rVNIIPVIaKADtLT~~El~~fK~~I~~~l~~~~I~iy~fp~~~~dd~e~~~~~~~l~~~~PFAVVgS~~~~~~ 80 (257)
|+.|+..+||||||+|+|+||++|+..|+..|+++|..+||.||.||.+ |++....+..+++.+|||||||++++++
T Consensus 170 lk~L~~~~~vI~Vi~KtD~Lt~~E~~~l~~~I~~~L~~~gi~I~~is~~---d~~~~~~~~~~~~~~PFavvgs~~~~~~ 246 (427)
T 2qag_B 170 MKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTD---DESVAEINGTMNAHLPFAVIGSTEELKI 246 (427)
T ss_dssp HHHTCSCSEEEEEESCGGGSCHHHHHHHHHHHHHHHBTTBCCCCCCC--------CCSHHHHHTTC-CCBCCC-------
T ss_pred HHHHhhCCCEEEEEcchhccchHHHHHHHHHHHHHHHHcCCcEEecCCC---chhHHHHHhhhcCCCCeEEECCCCeeee
Confidence 4678899999999999999999999999999999999999999999863 4445567888999999999999999999
Q ss_pred CCeeeecccCCceeeeecCCccCchHHHHHHHHHhhHHHHHHhhhhhhHHHhHHHHhhcCCCCCCC-CCCCCCchhhHHH
Q psy5592 81 DGKKVRGRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDLKDVTSNVHYENFRCRKLAGLGTDGKP-RLLNKNPLAQMEE 159 (257)
Q Consensus 81 ~g~~vrgR~YpWG~veVeN~~HcDF~~LR~~Li~thl~dLkd~T~~~~YE~YRt~kL~~~~~~~~~-~~~~~~p~~~~ee 159 (257)
+|+.||||+||||+|+|+||+||||++||++||+|||+||+++|+++|||+||+++|+.++..+.. ...+.+|...+++
T Consensus 247 ~g~~vrgR~ypWG~~even~~h~DF~~Lr~~l~~t~~~dL~~~T~~~~YE~yR~~~L~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
T 2qag_B 247 GNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEA 326 (427)
T ss_dssp -CCCC-----CCCCCC-----CCSSHHHHHHHHHTSTTHHHHHHHHHTTHHHHHHHHHHHC-------------------
T ss_pred CCcEEEEecCCCceEEeCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccchhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765432 1222355677889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcchHH
Q psy5592 160 EKREHEAKMKKMEVDMEQVFEMKVKEKKQKLKDSEID-------MKKSLEAQIKELEEKRRGLELEISQWEQSNGVSMDE 232 (257)
Q Consensus 160 e~~~~~~kl~k~E~em~~vF~~kv~eke~kl~~~e~e-------~~~~l~~q~~~leek~~~le~e~~~~~~~~~~~~~~ 232 (257)
++++|+.+|++||++|+++|+++|++++++|+++|++ |++.+++|+++||+++++||+|+++|++.++.. +.
T Consensus 327 ~~~~~~~~~~~~e~~~~~~f~~~v~~~e~~l~~~e~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~-~~ 405 (427)
T 2qag_B 327 KRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAA-EL 405 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999999999999999999997 888899999999999999999999999997655 33
Q ss_pred HHhhhhh
Q psy5592 233 LRRRSLE 239 (257)
Q Consensus 233 l~~~~l~ 239 (257)
++.++..
T Consensus 406 ~~~~~~~ 412 (427)
T 2qag_B 406 LQSQGSQ 412 (427)
T ss_dssp -------
T ss_pred Hhhhhhh
Confidence 5555433
|
| >2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} | Back alignment and structure |
|---|
| >2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* | Back alignment and structure |
|---|
| >2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A* | Back alignment and structure |
|---|
| >1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A* | Back alignment and structure |
|---|
| >1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1 | Back alignment and structure |
|---|
| >1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8 | Back alignment and structure |
|---|
| >3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 257 | |||
| d1nj8a1 | 126 | Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M | 90.15 | |
| d1nj1a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me | 88.09 | |
| d1g5ha1 | 127 | The aaRS-like accessory subunit of mitochondrial p | 88.0 | |
| d1hc7a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Thermus the | 80.36 |
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]
Probab=90.15 E-value=0.68 Score=34.31 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=57.0
Q ss_pred CcceeeeeecCCCCCHHHHHHHHHHHHHHHHhCCCccccCCCCCCCChhhhHhhhhhhcCCCeeEeecCeeeeeCCeeee
Q psy5592 7 KVNIIPVIAKADTMTPEECALFKKQILSEIAQHKIEIYQFPPGGSSEDDTSKFNKNLRDRVPFAVVGSNTVVEIDGKKVR 86 (257)
Q Consensus 7 rVNIIPVIaKADtLT~~El~~fK~~I~~~l~~~~I~iy~fp~~~~dd~e~~~~~~~l~~~~PFAVVgS~~~~~~~g~~vr 86 (257)
.|.||||..+.+ .+.+..+=..|.+.|. +||.++- ++ .++.-.......-...+||.||-+...++.+--.++
T Consensus 13 qv~Iipi~~~~~---~~~~~~~a~~l~~~L~-~~i~v~~--D~-~~~~~g~k~~~a~~~giP~~iiiG~ke~~~~~v~lr 85 (126)
T d1nj8a1 13 QVVIVPLIFKGK---EDIVMEKAKEIYEKLK-GKFRVHI--DD-RDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLF 85 (126)
T ss_dssp SEEEEECCCSSC---HHHHHHHHHHHHHHHH-TTSCEEE--CC-SCSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEE
T ss_pred eEEEEeccCCCc---hHHHHHHHHHHHHHhc-cceeEEe--ec-ccchHHHHHHHHHHHHHHHHHhcccchhhCCEEEEE
Confidence 689999998877 3556667778888884 6887751 11 111111122222245799998877655443323454
Q ss_pred cccCCceeeeecCCccCchHHHHHHHHHhhHHHHHHhh
Q psy5592 87 GRKYPWGIAEVENLEHCDFIALRNMLIRTNLQDLKDVT 124 (257)
Q Consensus 87 gR~YpWG~veVeN~~HcDF~~LR~~Li~thl~dLkd~T 124 (257)
-|.-.. ...| ...|+...=.-+|....++|....
T Consensus 86 ~R~~~~-~~~v---~~~~l~~~i~~~l~~~~~~~~~ka 119 (126)
T d1nj8a1 86 RRDTME-KFQV---DETQLMEVVEKTLNNIMENIKNRA 119 (126)
T ss_dssp ETTTCC-EEEE---ETTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCc-eEEE---cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 454332 1111 234554433344444445544433
|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|