Psyllid ID: psy568
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1614 | 2.2.26 [Sep-21-2011] | |||||||
| P37276 | 4639 | Dynein heavy chain, cytop | yes | N/A | 0.982 | 0.341 | 0.808 | 0.0 | |
| P38650 | 4644 | Cytoplasmic dynein 1 heav | yes | N/A | 0.980 | 0.340 | 0.742 | 0.0 | |
| Q14204 | 4646 | Cytoplasmic dynein 1 heav | yes | N/A | 0.980 | 0.340 | 0.742 | 0.0 | |
| Q9JHU4 | 4644 | Cytoplasmic dynein 1 heav | yes | N/A | 0.980 | 0.340 | 0.742 | 0.0 | |
| Q19020 | 4568 | Dynein heavy chain, cytop | yes | N/A | 0.982 | 0.347 | 0.637 | 0.0 | |
| P78716 | 4349 | Dynein heavy chain, cytop | N/A | N/A | 0.974 | 0.361 | 0.592 | 0.0 | |
| P45443 | 4367 | Dynein heavy chain, cytop | N/A | N/A | 0.972 | 0.359 | 0.596 | 0.0 | |
| P45444 | 4345 | Dynein heavy chain, cytop | yes | N/A | 0.973 | 0.361 | 0.597 | 0.0 | |
| P34036 | 4730 | Dynein heavy chain, cytop | yes | N/A | 0.981 | 0.334 | 0.569 | 0.0 | |
| Q27171 | 4540 | Dynein heavy chain, cytop | N/A | N/A | 0.965 | 0.343 | 0.492 | 0.0 |
| >sp|P37276|DYHC_DROME Dynein heavy chain, cytoplasmic OS=Drosophila melanogaster GN=Dhc64C PE=2 SV=2 | Back alignment and function desciption |
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Score = 2759 bits (7153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1307/1616 (80%), Positives = 1455/1616 (90%), Gaps = 31/1616 (1%)
Query: 1 MTGLKEKIKEVCREEFLVCGEGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW 60
M GLKE+I++VC+E++LVCGEG+E+G WMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW
Sbjct: 2161 MKGLKEEIRKVCQEDYLVCGEGDEQGAAWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW 2220
Query: 61 KVLLKALERYEGVEGVAHIIDPKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGE 120
K LLKALER+EGVEGVAH+IDPKAISKEALYGVLDPNTREWTDGLFTHILR+IIDNVRGE
Sbjct: 2221 KTLLKALERFEGVEGVAHVIDPKAISKEALYGVLDPNTREWTDGLFTHILRKIIDNVRGE 2280
Query: 121 ISKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNIRIMFEVQDLKYATLA 180
I+KRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPN+R+MFEVQDLK+ATLA
Sbjct: 2281 INKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRVMFEVQDLKFATLA 2340
Query: 181 TVSRCGMIWFSEDVLSTEMIFENYLSRLRNIALDDIDDDSSLLITVDATGKAPDDVLSPA 240
TVSRCGM+WFSEDVLSTEMIFENYLSRLR+I L+D D+D + V K ++ +SP+
Sbjct: 2341 TVSRCGMVWFSEDVLSTEMIFENYLSRLRSIPLEDGDED---FVGVIKPAKDKEEEVSPS 2397
Query: 241 LTLQQDVASILSTHFAPDGLVVRALDYAMQQEHIMDFTRLRALGSLFSMLNQGVRNVLQY 300
L +Q+D+A +L F+ DG+VVR L+YAM QEHIMDFTRLRAL SLFSMLNQ RNVL +
Sbjct: 2398 LQVQRDIALLLLPFFSADGIVVRTLEYAMDQEHIMDFTRLRALSSLFSMLNQAARNVLTF 2457
Query: 301 NHSHSDFPLSQDVVERYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLP-ATSS 359
N H DFP S D +E YIP+ LVYS+LWSFAGD KLK+R D G+F+RSVTT+ LP A +
Sbjct: 2458 NAQHPDFPCSADQLEHYIPKALVYSVLWSFAGDAKLKVRIDLGDFVRSVTTVPLPGAAGA 2517
Query: 360 DIVDFEVNIKNGEWVPWSNKVPQIEVETQKVAASDVVVPTLDTVRHESLLYTWLAEHKPL 419
I+D+EVN+ +G+WVPWSNKVP IEVET KVA+ D+VVPTLDTVRHESLLYTWLAEHKPL
Sbjct: 2518 PIIDYEVNM-SGDWVPWSNKVPVIEVETHKVASPDIVVPTLDTVRHESLLYTWLAEHKPL 2576
Query: 420 VLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPNGVILS 479
VLCGPPGSGKTMTL SALRALPDMEVV LNFSSATTPELLLKTFDHYCEYRKTPNGV+LS
Sbjct: 2577 VLCGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEYRKTPNGVVLS 2636
Query: 480 PIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGA 539
P+Q+GKWLVLFCDEINLPDMD Y TQRVISFLRQL+E +GFYR +D+ WVSLERIQ VGA
Sbjct: 2637 PVQIGKWLVLFCDEINLPDMDSYGTQRVISFLRQLVEHKGFYRASDQAWVSLERIQFVGA 2696
Query: 540 CNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTN 599
CNPPTDPGRKPLSHRFLRHVP+IYVDYPGETSLKQIYGTFSRAMLRL+P LRGYA+ LTN
Sbjct: 2697 CNPPTDPGRKPLSHRFLRHVPIIYVDYPGETSLKQIYGTFSRAMLRLMPALRGYAEPLTN 2756
Query: 600 AMVELYLASQEKFTQDMQPHYVYSPREMTRWVRGICEAIRPLESLTVEGLVRLWAHEALR 659
AMVE YLASQ++FTQDMQPHYVYSPREMTRWVRGICEAIRPL+SL VEGLVRLWAHEALR
Sbjct: 2757 AMVEFYLASQDRFTQDMQPHYVYSPREMTRWVRGICEAIRPLDSLPVEGLVRLWAHEALR 2816
Query: 660 LFQDRLVNDVERQWTNENIDAVAMKYFSNIDK-EVLARPILYSNWLSKNYVPVGTTELRE 718
LFQDRLV+D ER+WTNENID V K+F I++ E L RPILYSNWLSK+Y+PV ELRE
Sbjct: 2817 LFQDRLVDDSERRWTNENIDLVGQKHFPGINQEEALQRPILYSNWLSKDYMPVNREELRE 2876
Query: 719 YVQARLKVFYEEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 778
YV ARLKVFYEEELDV LVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA
Sbjct: 2877 YVHARLKVFYEEELDVPLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 2936
Query: 779 FMNGLSVFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTL 838
+MNGLS+FQI+ HNKYT DFDEDLR VLRRSGCK+EKIAF+LDESNVL+SGFLERMNTL
Sbjct: 2937 WMNGLSIFQIKVHNKYTSEDFDEDLRCVLRRSGCKDEKIAFILDESNVLDSGFLERMNTL 2996
Query: 839 LANGEIPGLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTMNPS 898
LANGE+PGLFEGDEYTTLMTQCKEGAQREGLMLDS++ELYKWFTQQVM+NLHVVFTMNPS
Sbjct: 2997 LANGEVPGLFEGDEYTTLMTQCKEGAQREGLMLDSSDELYKWFTQQVMRNLHVVFTMNPS 3056
Query: 899 SEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNWKAPDFFPSVC 958
++GLKDRAATSPALFNRCVLNWFGDWSD+AL+QV KEFT+++DL+ P NW APDFFPSVC
Sbjct: 3057 TDGLKDRAATSPALFNRCVLNWFGDWSDSALFQVGKEFTTRVDLEKP-NWHAPDFFPSVC 3115
Query: 959 SLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLYREK 1018
LV P+HRD+VIN+CVYVHQTLH+ANARL+KRG RTMA+TPRHYLDFI+HFVKLY EK
Sbjct: 3116 PLVPANPTHRDAVINSCVYVHQTLHQANARLAKRGGRTMAVTPRHYLDFIHHFVKLYNEK 3175
Query: 1019 CSELEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEA 1078
S+LEEQQLHLNVGL KIAETVEQVEEMQKSLAVK QELQ+KNEAAN KLK+M +DQQEA
Sbjct: 3176 RSDLEEQQLHLNVGLNKIAETVEQVEEMQKSLAVKKQELQAKNEAANAKLKQMFQDQQEA 3235
Query: 1079 EKRKVQSQDIQAEIEKQTVEIAQKRVFVMEDLAQVEPAVMDAQQAVKEIKKQQLVELRSM 1138
EK+K+QSQ+IQ + QTV+I +KR +VM DLAQVEPAV+DAQ AVK I+KQQLVE+R+M
Sbjct: 3236 EKKKIQSQEIQIRLADQTVKIEEKRKYVMADLAQVEPAVIDAQAAVKSIRKQQLVEVRTM 3295
Query: 1139 ANPPSVVKLALESICLLLGENATDWKAIRAVVMRENFINSIVSNFNTEMITDEVREKMHS 1198
ANPPSVVKLALESICLLLGENATDWK+IRAV+MRENFINSIVSNF TE ITD+VREKM S
Sbjct: 3296 ANPPSVVKLALESICLLLGENATDWKSIRAVIMRENFINSIVSNFGTENITDDVREKMKS 3355
Query: 1199 RYLSNPDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEVQASENKAK 1258
+YLSNPDY++EK NRASMACGPMVKWAIAQI YADMLK+VEPLR EL+SLE QA N A
Sbjct: 3356 KYLSNPDYNFEKVNRASMACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVNLAS 3415
Query: 1259 GEETKDLITQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAKFYEYAQLIAQATAIKTDL 1318
+ETKDL+ QLE+SIA+YK+EYAQLI+QA AIKTD L
Sbjct: 3416 AKETKDLVEQLERSIAAYKEEYAQLISQAQAIKTD------------------------L 3451
Query: 1319 DNVQAKVERSMALLKSLGIERERWEATSETFRSQMATIIGDVLLSSAYLAYAGYFDQHYR 1378
+NVQAKV+RS+ALLKSL IERERWE+TSETF+SQM+TIIGDVLLS+A++AY GYFDQHYR
Sbjct: 3452 ENVQAKVDRSIALLKSLNIERERWESTSETFKSQMSTIIGDVLLSAAFIAYGGYFDQHYR 3511
Query: 1379 QSLFSTWNSHLIAAGIQFRPEIALTEYLSSPDERLRWQGNALPSDHLCTENAIMLRRFNR 1438
+LF+TW+ HL AA IQ+R +IA TEYLS+PDERLRWQ NALP+D LCTENAIML+RFNR
Sbjct: 3512 LNLFTTWSQHLQAASIQYRADIARTEYLSNPDERLRWQANALPTDDLCTENAIMLKRFNR 3571
Query: 1439 YPLIIDPSGQATEFILKEFESRKITKTSFLDDAFRKNLESALRFGNPLLVQDVENYDTIL 1498
YPLIIDPSGQAT F+L E+ +KITKTSFLDD+FRKNLESALRFGNPLLVQDVENYD IL
Sbjct: 3572 YPLIIDPSGQATTFLLNEYAGKKITKTSFLDDSFRKNLESALRFGNPLLVQDVENYDPIL 3631
Query: 1499 NPVLNRELRRTGGRVLITLGDQDIDISPTFVIFLSTRDPTVEFPPDICSRVTFVNFTVTR 1558
NPVLNRELRRTGGRVLITLGDQDID+SP+FVIFLSTRDPTVEFPPDICSRVTFVNFTVTR
Sbjct: 3632 NPVLNRELRRTGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDICSRVTFVNFTVTR 3691
Query: 1559 SSLQSQCLNRVLKAERPDIDTKRSDLLKLQGEFHLRLRHLEKSLLGALNESKGKLL 1614
SSLQSQCLN+VLKAERPDID KRSDLLKLQGEF LRLR LEKSLL ALN++KGK+L
Sbjct: 3692 SSLQSQCLNQVLKAERPDIDEKRSDLLKLQGEFRLRLRQLEKSLLQALNDAKGKIL 3747
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Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Drosophila melanogaster (taxid: 7227) |
| >sp|P38650|DYHC1_RAT Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus GN=Dync1h1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1 SV=5 | Back alignment and function description |
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| >sp|Q9JHU4|DYHC1_MOUSE Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus GN=Dync1h1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q19020|DYHC_CAEEL Dynein heavy chain, cytoplasmic OS=Caenorhabditis elegans GN=dhc-1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P78716|DYHC_FUSSO Dynein heavy chain, cytoplasmic OS=Fusarium solani subsp. pisi GN=DHC1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ro-1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA PE=3 SV=2 | Back alignment and function description |
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| >sp|P34036|DYHC_DICDI Dynein heavy chain, cytoplasmic OS=Dictyostelium discoideum GN=dhcA PE=1 SV=2 | Back alignment and function description |
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| >sp|Q27171|DYHC_PARTE Dynein heavy chain, cytoplasmic OS=Paramecium tetraurelia GN=DHC-8 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1614 | ||||||
| 383864984 | 4630 | PREDICTED: dynein heavy chain, cytoplasm | 0.980 | 0.341 | 0.826 | 0.0 | |
| 340708902 | 4641 | PREDICTED: LOW QUALITY PROTEIN: dynein h | 0.980 | 0.341 | 0.824 | 0.0 | |
| 350419063 | 4641 | PREDICTED: dynein heavy chain, cytoplasm | 0.980 | 0.341 | 0.824 | 0.0 | |
| 307195555 | 3852 | Dynein heavy chain, cytoplasmic [Harpegn | 0.980 | 0.410 | 0.823 | 0.0 | |
| 383864986 | 4629 | PREDICTED: dynein heavy chain, cytoplasm | 0.980 | 0.341 | 0.824 | 0.0 | |
| 193582590 | 4677 | PREDICTED: dynein heavy chain, cytoplasm | 0.984 | 0.339 | 0.821 | 0.0 | |
| 380028455 | 4628 | PREDICTED: LOW QUALITY PROTEIN: dynein h | 0.980 | 0.341 | 0.821 | 0.0 | |
| 91087317 | 4649 | PREDICTED: similar to dynein heavy chain | 0.980 | 0.340 | 0.816 | 0.0 | |
| 170044218 | 4655 | dynein heavy chain [Culex quinquefasciat | 0.981 | 0.340 | 0.817 | 0.0 | |
| 157115226 | 4662 | dynein heavy chain [Aedes aegypti] gi|10 | 0.982 | 0.339 | 0.818 | 0.0 |
| >gi|383864984|ref|XP_003707957.1| PREDICTED: dynein heavy chain, cytoplasmic-like isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
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Score = 2810 bits (7283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1335/1616 (82%), Positives = 1474/1616 (91%), Gaps = 33/1616 (2%)
Query: 1 MTGLKEKIKEVCREEFLVCGEGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW 60
M GLK++I++VC EE+LVCGEG+E+GG W EKVLQLYQI NLNHGLMMVGPSGSGK+TAW
Sbjct: 2153 MKGLKDQIRKVCMEEYLVCGEGDEQGGAWQEKVLQLYQICNLNHGLMMVGPSGSGKTTAW 2212
Query: 61 KVLLKALERYEGVEGVAHIIDPKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGE 120
KVLLKALER+EG+EGVAH+IDPKAISKE LYGVLD NTREWTDGLFTHILR+IIDNVRGE
Sbjct: 2213 KVLLKALERFEGIEGVAHVIDPKAISKETLYGVLDQNTREWTDGLFTHILRKIIDNVRGE 2272
Query: 121 ISKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNIRIMFEVQDLKYATLA 180
I+KRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPN+R+MFEVQDLKYATLA
Sbjct: 2273 INKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRVMFEVQDLKYATLA 2332
Query: 181 TVSRCGMIWFSEDVLSTEMIFENYLSRLRNIALDDIDDDSSLLITVDATGKAPDDVLSPA 240
TVSRCGM+WFSEDVLSTEMIFENY+ RL+NI L+D ++D+ ++ AT K DD LSPA
Sbjct: 2333 TVSRCGMVWFSEDVLSTEMIFENYMLRLKNIPLEDGEEDN---LSKKATEK--DDTLSPA 2387
Query: 241 LTLQQDVASILSTHFAPDGLVVRALDYAMQQEHIMDFTRLRALGSLFSMLNQGVRNVLQY 300
L++Q++VASIL ++FAPDGLVVR L+YAM+QEHIMDFTRLRAL SLFSMLNQ VRNVLQY
Sbjct: 2388 LSVQREVASILQSYFAPDGLVVRCLEYAMKQEHIMDFTRLRALSSLFSMLNQAVRNVLQY 2447
Query: 301 NHSHSDFPLSQDVVERYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLPATSS- 359
NHSH+DFPL + +ERY+P+ LVY+LLWSFAGD KLK+RSD G+F+RS+TTI LP S+
Sbjct: 2448 NHSHTDFPLPSEQLERYMPKCLVYALLWSFAGDAKLKVRSDLGDFVRSITTIPLPTQSNI 2507
Query: 360 DIVDFEVNIKNGEWVPWSNKVPQIEVETQKVAASDVVVPTLDTVRHESLLYTWLAEHKPL 419
I+DFEV+I +GEW+PWSNKVPQIEVET KVA+ D+VVPTLDTVRHESLLYTWLAEHKP+
Sbjct: 2508 PIIDFEVSI-HGEWLPWSNKVPQIEVETHKVASPDIVVPTLDTVRHESLLYTWLAEHKPI 2566
Query: 420 VLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPNGVILS 479
VLCGPPGSGKTMTL SALRALPDMEVV LNFSSATTPELLLKTFDHYCEYRKTPNGV+LS
Sbjct: 2567 VLCGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEYRKTPNGVVLS 2626
Query: 480 PIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGA 539
P+QLGKWL+LFCDEINLPDMD Y TQRVISFLRQL+E RGFYR +D+ WV+LERIQ VGA
Sbjct: 2627 PVQLGKWLILFCDEINLPDMDNYGTQRVISFLRQLVEHRGFYRTSDQAWVTLERIQFVGA 2686
Query: 540 CNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTN 599
CNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTF+RAMLRL P LRGYA+ LTN
Sbjct: 2687 CNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFTRAMLRLTPSLRGYAEPLTN 2746
Query: 600 AMVELYLASQEKFTQDMQPHYVYSPREMTRWVRGICEAIRPLESLTVEGLVRLWAHEALR 659
AMVE YLASQE+FTQDMQPHYVYSPREMTRWVRGICEAIRPL++L+VEGLVRLWAHEALR
Sbjct: 2747 AMVEFYLASQERFTQDMQPHYVYSPREMTRWVRGICEAIRPLDNLSVEGLVRLWAHEALR 2806
Query: 660 LFQDRLVNDVERQWTNENIDAVAMKYFSNIDKE-VLARPILYSNWLSKNYVPVGTTELRE 718
LFQDRLV D ER WTN+NID VAMK+F N+DKE LARPILYSNWLSK+YVPV ELR+
Sbjct: 2807 LFQDRLVEDSERTWTNKNIDTVAMKHFMNVDKEKALARPILYSNWLSKDYVPVNRQELRD 2866
Query: 719 YVQARLKVFYEEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 778
YV+ARLKVFYEEELDV LVLFDEVL+HVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA
Sbjct: 2867 YVRARLKVFYEEELDVPLVLFDEVLEHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 2926
Query: 779 FMNGLSVFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTL 838
+MNGLS+FQI+ HNKYTG DFDEDLR VLRRSGCK+EKIAF+LDESNVL+SGFLERMNTL
Sbjct: 2927 WMNGLSIFQIKVHNKYTGEDFDEDLRQVLRRSGCKDEKIAFILDESNVLDSGFLERMNTL 2986
Query: 839 LANGEIPGLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTMNPS 898
LANGE+PGLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFT QVMKNLHVVFTMNPS
Sbjct: 2987 LANGEVPGLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTGQVMKNLHVVFTMNPS 3046
Query: 899 SEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNWKAPDFFPSVC 958
++GLKDRAATSPALFNRCVLNWFGDWSD AL+QV KEFTS++DL+ P +WK PDFFPSVC
Sbjct: 3047 TDGLKDRAATSPALFNRCVLNWFGDWSDNALFQVGKEFTSRVDLERP-SWKYPDFFPSVC 3105
Query: 959 SLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLYREK 1018
SL+ PSHRD+VINACVYVHQTLHKANARL+KRGSRTMAITPRHYLDFINHFVKLY+EK
Sbjct: 3106 SLIPAQPSHRDAVINACVYVHQTLHKANARLAKRGSRTMAITPRHYLDFINHFVKLYQEK 3165
Query: 1019 CSELEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEA 1078
S+LEEQQLHLNVGL KIAETVEQVEEMQKSLA+KSQEL +KNEAAN KL++M+KDQQEA
Sbjct: 3166 RSDLEEQQLHLNVGLSKIAETVEQVEEMQKSLAIKSQELHAKNEAANAKLRQMVKDQQEA 3225
Query: 1079 EKRKVQSQDIQAEIEKQTVEIAQKRVFVMEDLAQVEPAVMDAQQAVKEIKKQQLVELRSM 1138
EK+KVQSQ+IQ ++ QTV I QKR VM DLAQVEPAV+DAQ AVK IKKQ LVE+RSM
Sbjct: 3226 EKKKVQSQEIQQQLAIQTVAINQKRDDVMADLAQVEPAVIDAQNAVKSIKKQHLVEVRSM 3285
Query: 1139 ANPPSVVKLALESICLLLGENATDWKAIRAVVMRENFINSIVSNFNTEMITDEVREKMHS 1198
ANPP++VK+ALESICLLLGENA+DWK+IRAV+MR+NFIN+IVSNF+TE ITDEVREKM S
Sbjct: 3286 ANPPAIVKVALESICLLLGENASDWKSIRAVIMRDNFINTIVSNFSTEDITDEVREKMKS 3345
Query: 1199 RYLSNPDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEVQASENKAK 1258
RYLSNPDY++EK NRASMACGP+VKWA AQI YADMLK+VEPLR EL SLE QA N K
Sbjct: 3346 RYLSNPDYNFEKVNRASMACGPLVKWATAQIEYADMLKRVEPLRDELHSLERQAETNMQK 3405
Query: 1259 GEETKDLITQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAKFYEYAQLIAQATAIKTDL 1318
GEE K+LI QLE+SIASYK+EYAQLI+QA AIK D L
Sbjct: 3406 GEEVKNLIAQLEQSIASYKEEYAQLISQAQAIKAD------------------------L 3441
Query: 1319 DNVQAKVERSMALLKSLGIERERWEATSETFRSQMATIIGDVLLSSAYLAYAGYFDQHYR 1378
++VQAKV+RS+ALLKSL IERERWEATSETF+SQM+TIIGDVLLSSA+LAYAGYFDQHYR
Sbjct: 3442 ESVQAKVDRSIALLKSLVIERERWEATSETFKSQMSTIIGDVLLSSAFLAYAGYFDQHYR 3501
Query: 1379 QSLFSTWNSHLIAAGIQFRPEIALTEYLSSPDERLRWQGNALPSDHLCTENAIMLRRFNR 1438
Q+LFSTW HL A +QFRP+IA TEYLS+PDERLRWQ NALP+D LCTENAIML+RFNR
Sbjct: 3502 QNLFSTWCQHLQHANLQFRPDIARTEYLSNPDERLRWQANALPTDDLCTENAIMLKRFNR 3561
Query: 1439 YPLIIDPSGQATEFILKEFESRKITKTSFLDDAFRKNLESALRFGNPLLVQDVENYDTIL 1498
YPLIIDPSGQATEFI+ EF+ RKITKTSFLDD+FRKNLESALRFGNPLLVQDVENYD IL
Sbjct: 3562 YPLIIDPSGQATEFIMNEFKDRKITKTSFLDDSFRKNLESALRFGNPLLVQDVENYDPIL 3621
Query: 1499 NPVLNRELRRTGGRVLITLGDQDIDISPTFVIFLSTRDPTVEFPPDICSRVTFVNFTVTR 1558
NPVLNRELRRTGGRVLITLGDQDID+SP+FVIFLSTRDPTVEFPPDICSRVTFVNFTVTR
Sbjct: 3622 NPVLNRELRRTGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDICSRVTFVNFTVTR 3681
Query: 1559 SSLQSQCLNRVLKAERPDIDTKRSDLLKLQGEFHLRLRHLEKSLLGALNESKGKLL 1614
SSLQSQCLN+VLKAERPDID KRSDLLKLQGEFHLRLR LEKSLL ALN++KGK+L
Sbjct: 3682 SSLQSQCLNQVLKAERPDIDEKRSDLLKLQGEFHLRLRQLEKSLLQALNDAKGKIL 3737
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340708902|ref|XP_003393056.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain, cytoplasmic-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|350419063|ref|XP_003492058.1| PREDICTED: dynein heavy chain, cytoplasmic-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|307195555|gb|EFN77430.1| Dynein heavy chain, cytoplasmic [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|383864986|ref|XP_003707958.1| PREDICTED: dynein heavy chain, cytoplasmic-like isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|193582590|ref|XP_001951535.1| PREDICTED: dynein heavy chain, cytoplasmic-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|380028455|ref|XP_003697917.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain, cytoplasmic-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|91087317|ref|XP_975584.1| PREDICTED: similar to dynein heavy chain [Tribolium castaneum] gi|270010987|gb|EFA07435.1| dynein heavy chain [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|170044218|ref|XP_001849752.1| dynein heavy chain [Culex quinquefasciatus] gi|167867449|gb|EDS30832.1| dynein heavy chain [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|157115226|ref|XP_001658153.1| dynein heavy chain [Aedes aegypti] gi|108876984|gb|EAT41209.1| AAEL007132-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1614 | ||||||
| FB|FBgn0261797 | 4639 | Dhc64C "Dynein heavy chain 64C | 0.802 | 0.279 | 0.812 | 0.0 | |
| UNIPROTKB|F1NKL4 | 4653 | DYNC1H1 "Uncharacterized prote | 0.820 | 0.284 | 0.726 | 0.0 | |
| UNIPROTKB|F1NVQ7 | 4646 | DYNC1H1 "Uncharacterized prote | 0.820 | 0.285 | 0.726 | 0.0 | |
| UNIPROTKB|F1PGY9 | 4646 | DYNC1H1 "Uncharacterized prote | 0.820 | 0.285 | 0.724 | 0.0 | |
| UNIPROTKB|E1BDX8 | 4646 | DYNC1H1 "Uncharacterized prote | 0.820 | 0.285 | 0.723 | 0.0 | |
| RGD|2511 | 4644 | Dync1h1 "dynein cytoplasmic 1 | 0.820 | 0.285 | 0.723 | 0.0 | |
| MGI|MGI:103147 | 4644 | Dync1h1 "dynein cytoplasmic 1 | 0.820 | 0.285 | 0.723 | 0.0 | |
| UNIPROTKB|Q14204 | 4646 | DYNC1H1 "Cytoplasmic dynein 1 | 0.820 | 0.285 | 0.723 | 0.0 | |
| UNIPROTKB|F1LRT9 | 3642 | Dync1h1 "Cytoplasmic dynein 1 | 0.820 | 0.363 | 0.723 | 0.0 | |
| ZFIN|ZDB-GENE-030131-7050 | 4643 | dync1h1 "dynein, cytoplasmic 1 | 0.822 | 0.285 | 0.712 | 0.0 |
| FB|FBgn0261797 Dhc64C "Dynein heavy chain 64C" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 5592 (1973.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 1058/1302 (81%), Positives = 1177/1302 (90%)
Query: 1 MTGLKEKIKEVCREEFLVCGEGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW 60
M GLKE+I++VC+E++LVCGEG+E+G WMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW
Sbjct: 2161 MKGLKEEIRKVCQEDYLVCGEGDEQGAAWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAW 2220
Query: 61 KVLLKALERYEGVEGVAHIIDPKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGE 120
K LLKALER+EGVEGVAH+IDPKAISKEALYGVLDPNTREWTDGLFTHILR+IIDNVRGE
Sbjct: 2221 KTLLKALERFEGVEGVAHVIDPKAISKEALYGVLDPNTREWTDGLFTHILRKIIDNVRGE 2280
Query: 121 ISKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNIRIMFEVQDLKYATLA 180
I+KRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPN+R+MFEVQDLK+ATLA
Sbjct: 2281 INKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRVMFEVQDLKFATLA 2340
Query: 181 TVSRCGMIWFSEDVLSTEMIFENYLSRLRNIAXXXXXXXXXXXXTVDATGKAPDDVLSPA 240
TVSRCGM+WFSEDVLSTEMIFENYLSRLR+I V K ++ +SP+
Sbjct: 2341 TVSRCGMVWFSEDVLSTEMIFENYLSRLRSIPLEDGDEDFVG---VIKPAKDKEEEVSPS 2397
Query: 241 LTLQQDVASILSTHFAPDGLVVRALDYAMQQEHIMDFTRLRALGSLFSMLNQGVRNVLQY 300
L +Q+D+A +L F+ DG+VVR L+YAM QEHIMDFTRLRAL SLFSMLNQ RNVL +
Sbjct: 2398 LQVQRDIALLLLPFFSADGIVVRTLEYAMDQEHIMDFTRLRALSSLFSMLNQAARNVLTF 2457
Query: 301 NHSHSDFPLSQDVVERYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLP-ATSS 359
N H DFP S D +E YIP+ LVYS+LWSFAGD KLK+R D G+F+RSVTT+ LP A +
Sbjct: 2458 NAQHPDFPCSADQLEHYIPKALVYSVLWSFAGDAKLKVRIDLGDFVRSVTTVPLPGAAGA 2517
Query: 360 DIVDFEVNIKNGEWVPWSNKVPQIEVETQKVAASDVVVPTLDTVRHESLLYTWLAEHKPL 419
I+D+EVN+ +G+WVPWSNKVP IEVET KVA+ D+VVPTLDTVRHESLLYTWLAEHKPL
Sbjct: 2518 PIIDYEVNM-SGDWVPWSNKVPVIEVETHKVASPDIVVPTLDTVRHESLLYTWLAEHKPL 2576
Query: 420 VLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPNGVILS 479
VLCGPPGSGKTMTL SALRALPDMEVV LNFSSATTPELLLKTFDHYCEYRKTPNGV+LS
Sbjct: 2577 VLCGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEYRKTPNGVVLS 2636
Query: 480 PIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGA 539
P+Q+GKWLVLFCDEINLPDMD Y TQRVISFLRQL+E +GFYR +D+ WVSLERIQ VGA
Sbjct: 2637 PVQIGKWLVLFCDEINLPDMDSYGTQRVISFLRQLVEHKGFYRASDQAWVSLERIQFVGA 2696
Query: 540 CNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTN 599
CNPPTDPGRKPLSHRFLRHVP+IYVDYPGETSLKQIYGTFSRAMLRL+P LRGYA+ LTN
Sbjct: 2697 CNPPTDPGRKPLSHRFLRHVPIIYVDYPGETSLKQIYGTFSRAMLRLMPALRGYAEPLTN 2756
Query: 600 AMVELYLASQEKFTQDMQPHYVYSPREMTRWVRGICEAIRPLESLTVEGLVRLWAHEALR 659
AMVE YLASQ++FTQDMQPHYVYSPREMTRWVRGICEAIRPL+SL VEGLVRLWAHEALR
Sbjct: 2757 AMVEFYLASQDRFTQDMQPHYVYSPREMTRWVRGICEAIRPLDSLPVEGLVRLWAHEALR 2816
Query: 660 LFQDRLVNDVERQWTNENIDAVAMKYFSNIDKE-VLARPILYSNWLSKNYVPVGTTELRE 718
LFQDRLV+D ER+WTNENID V K+F I++E L RPILYSNWLSK+Y+PV ELRE
Sbjct: 2817 LFQDRLVDDSERRWTNENIDLVGQKHFPGINQEEALQRPILYSNWLSKDYMPVNREELRE 2876
Query: 719 YVQARLKVFYEEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 778
YV ARLKVFYEEELDV LVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA
Sbjct: 2877 YVHARLKVFYEEELDVPLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA 2936
Query: 779 FMNGLSVFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTL 838
+MNGLS+FQI+ HNKYT DFDEDLR VLRRSGCK+EKIAF+LDESNVL+SGFLERMNTL
Sbjct: 2937 WMNGLSIFQIKVHNKYTSEDFDEDLRCVLRRSGCKDEKIAFILDESNVLDSGFLERMNTL 2996
Query: 839 LANGEIPGLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTMNPS 898
LANGE+PGLFEGDEYTTLMTQCKEGAQREGLMLDS++ELYKWFTQQVM+NLHVVFTMNPS
Sbjct: 2997 LANGEVPGLFEGDEYTTLMTQCKEGAQREGLMLDSSDELYKWFTQQVMRNLHVVFTMNPS 3056
Query: 899 SEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNWKAPDFFPSVC 958
++GLKDRAATSPALFNRCVLNWFGDWSD+AL+QV KEFT+++DL+ P NW APDFFPSVC
Sbjct: 3057 TDGLKDRAATSPALFNRCVLNWFGDWSDSALFQVGKEFTTRVDLEKP-NWHAPDFFPSVC 3115
Query: 959 SLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLYREK 1018
LV P+HRD+VIN+CVYVHQTLH+ANARL+KRG RTMA+TPRHYLDFI+HFVKLY EK
Sbjct: 3116 PLVPANPTHRDAVINSCVYVHQTLHQANARLAKRGGRTMAVTPRHYLDFIHHFVKLYNEK 3175
Query: 1019 CSELEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEA 1078
S+LEEQQLHLNVGL KIAETVEQVEEMQKSLAVK QELQ+KNEAAN KLK+M +DQQEA
Sbjct: 3176 RSDLEEQQLHLNVGLNKIAETVEQVEEMQKSLAVKKQELQAKNEAANAKLKQMFQDQQEA 3235
Query: 1079 EKRKVQSQDIQAEIEKQTVEIAQKRVFVMEDLAQVEPAVMDAQQAVKEIKKQQLVELRSM 1138
EK+K+QSQ+IQ + QTV+I +KR +VM DLAQVEPAV+DAQ AVK I+KQQLVE+R+M
Sbjct: 3236 EKKKIQSQEIQIRLADQTVKIEEKRKYVMADLAQVEPAVIDAQAAVKSIRKQQLVEVRTM 3295
Query: 1139 ANPPSVVKLALESICLLLGENATDWKAIRAVVMRENFINSIVSNFNTEMITDEVREKMHS 1198
ANPPSVVKLALESICLLLGENATDWK+IRAV+MRENFINSIVSNF TE ITD+VREKM S
Sbjct: 3296 ANPPSVVKLALESICLLLGENATDWKSIRAVIMRENFINSIVSNFGTENITDDVREKMKS 3355
Query: 1199 RYLSNPDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEVQASENKAK 1258
+YLSNPDY++EK NRASMACGPMVKWAIAQI YADMLK+VEPLR EL+SLE QA N A
Sbjct: 3356 KYLSNPDYNFEKVNRASMACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVNLAS 3415
Query: 1259 GEETKDLITQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAK 1300
+ETKDL+ QLE+SIA+YK+EYAQLI+QA AIKTDL+NVQAK
Sbjct: 3416 AKETKDLVEQLERSIAAYKEEYAQLISQAQAIKTDLENVQAK 3457
|
|
| UNIPROTKB|F1NKL4 DYNC1H1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NVQ7 DYNC1H1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PGY9 DYNC1H1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BDX8 DYNC1H1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|2511 Dync1h1 "dynein cytoplasmic 1 heavy chain 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:103147 Dync1h1 "dynein cytoplasmic 1 heavy chain 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q14204 DYNC1H1 "Cytoplasmic dynein 1 heavy chain 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LRT9 Dync1h1 "Cytoplasmic dynein 1 heavy chain 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-7050 dync1h1 "dynein, cytoplasmic 1, heavy chain 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P45444 | DYHC_EMENI | No assigned EC number | 0.5972 | 0.9733 | 0.3615 | yes | N/A |
| Q9JHU4 | DYHC1_MOUSE | No assigned EC number | 0.7428 | 0.9807 | 0.3408 | yes | N/A |
| P38650 | DYHC1_RAT | No assigned EC number | 0.7428 | 0.9807 | 0.3408 | yes | N/A |
| P34036 | DYHC_DICDI | No assigned EC number | 0.5699 | 0.9814 | 0.3348 | yes | N/A |
| Q19020 | DYHC_CAEEL | No assigned EC number | 0.6370 | 0.9826 | 0.3471 | yes | N/A |
| Q14204 | DYHC1_HUMAN | No assigned EC number | 0.7428 | 0.9807 | 0.3407 | yes | N/A |
| P37276 | DYHC_DROME | No assigned EC number | 0.8087 | 0.9820 | 0.3416 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1614 | |||
| COG5245 | 3164 | COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] | 0.0 | |
| pfam12780 | 268 | pfam12780, AAA_8, P-loop containing dynein motor r | 2e-42 | |
| pfam12777 | 344 | pfam12777, MT, Microtubule-binding stalk of dynein | 1e-36 | |
| pfam12781 | 228 | pfam12781, AAA_9, ATP-binding dynein motor region | 2e-33 | |
| pfam12775 | 272 | pfam12775, AAA_7, P-loop containing dynein motor r | 1e-20 | |
| pfam07728 | 135 | pfam07728, AAA_5, AAA domain (dynein-related subfa | 3e-13 | |
| cd00009 | 151 | cd00009, AAA, The AAA+ (ATPases Associated with a | 5e-13 | |
| smart00382 | 148 | smart00382, AAA, ATPases associated with a variety | 3e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-06 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 6e-06 | |
| cd00009 | 151 | cd00009, AAA, The AAA+ (ATPases Associated with a | 8e-06 | |
| pfam07728 | 135 | pfam07728, AAA_5, AAA domain (dynein-related subfa | 5e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| pfam13401 | 124 | pfam13401, AAA_22, AAA domain | 2e-04 | |
| TIGR03545 | 555 | TIGR03545, TIGR03545, TIGR03545 family protein | 2e-04 | |
| pfam07728 | 135 | pfam07728, AAA_5, AAA domain (dynein-related subfa | 4e-04 | |
| pfam13166 | 713 | pfam13166, AAA_13, AAA domain | 6e-04 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.002 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.004 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.004 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 0.004 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.004 |
| >gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Score = 830 bits (2145), Expect = 0.0
Identities = 349/1616 (21%), Positives = 587/1616 (36%), Gaps = 140/1616 (8%)
Query: 21 EGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAWKVLLKALERYEGVEGVAHII 80
E + G + + + + + K + Y ++
Sbjct: 1160 ESQQVSGLDVAQFVSFLRSVDTGAFHAEYFRVFLCKIKHYTDACD----YLWHVKSPYVK 1215
Query: 81 DPKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGEIS-KRQWIIFDGDVDPEWVE 139
D E F R +++ ++ + + +VE
Sbjct: 1216 KK----------YFDA-DMELR-QFFLMFNR---EDMEARLADSKMEYEVE-----RYVE 1255
Query: 140 NLNSVLDDNKLLTLPNGERLSLPPNIRIMFEVQDLKYATLATVSRCGMIWFSEDVLSTEM 199
+ + KL GE +++ + V RC + + S LST+
Sbjct: 1256 KTKAEVSSLKLELSSVGEG-------QVVVSNLG---SIGDKVGRCLVEYDSISRLSTKG 1305
Query: 200 IFENYLSRLRNIALDDIDDDSSLLITVDATGKAPDDVLSPALTLQQDVASILSTHFAPDG 259
+F + L LD+ D S + +
Sbjct: 1306 VFLDELGD-TKRYLDECLDFFSC------------FEEVQKEIDELSMVFCAD------- 1345
Query: 260 LVVRALDYAMQQEHIMD-------FTRLRALGSLFSMLNQGVRNVLQYNHSHSDFPLSQD 312
AL ++ HI+ A SL + L
Sbjct: 1346 ----ALRFSADLYHIVKERRFSGVLAGSDASESLGGKSIELAAI------------LEHK 1389
Query: 313 VVERYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLPATSS----DIVDFEVNI 368
+ + R + L GD + F L S I+ F ++
Sbjct: 1390 DLIVEMKRGINDVLKLRIFGDKCRESTPRFYLISDGDLIKDLNERSDYEEMLIMMFNISA 1449
Query: 369 KNGEWVPWSNKVPQIEVETQKVA-ASDVVVPTLDTVRHESLLYTWLAEHKPLVLCGPPGS 427
+ E+ ++V +VV+PT DT +S L + + CGPPGS
Sbjct: 1450 VITNNGS----IAGFELRGERVMLRKEVVIPTSDTGFVDSFSNEALNTLRSYIYCGPPGS 1505
Query: 428 GKTMTLLSALRALPDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPNGVILSPIQLGKWL 487
GK M + +LR+ EV NFS+ T L + EY V L P + K L
Sbjct: 1506 GKEMLMCPSLRSELITEVKYFNFSTCTMTPSKLSVLERETEYYPNTGVVRLYPKPVVKDL 1565
Query: 488 VLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGACNPPTDPG 547
VLFCDEINLP +Y VI FLR L+E++GF+ WV++ I GACNP TD G
Sbjct: 1566 VLFCDEINLPYGFEYYPPTVIVFLRPLVERQGFWSSIAVSWVTICGIILYGACNPGTDEG 1625
Query: 548 RKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTNAMVELYLA 607
R RF+R ++ YP SL+ IY ++ +A VELYL+
Sbjct: 1626 RVKYYERFIRKPVFVFCCYPELASLRNIYEAVLMGSYLCFDEFNRLSEETMSASVELYLS 1685
Query: 608 SQEKFTQDMQPHYVYSPREMTRWVRGICEAIRPLESLTVEGLVRLWAHEALRLFQDRLVN 667
S++K +Q +Y Y PRE+TR +R I L+ W EA+R DRLV
Sbjct: 1686 SKDKTKFFLQMNYGYKPRELTRSLRAIFGYAETRIDTPDVSLIIDWYCEAIREKIDRLVQ 1745
Query: 668 DVERQWTNENIDAVAMKYFSNIDKEVLA-RPILYSNWLSKNYVPVGTTELREYVQARLKV 726
E + +++ ++ + + I +S L + +L +V+ K+
Sbjct: 1746 QKESSTSRQDLYDFGLRAIREMIAGHIGEAEITFSMILFFGMACLLKKDLAVFVEEVRKI 1805
Query: 727 FYEEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAFMNGLSVF 786
F LDV+ V + + L H+LR R GH +L GV G FV ++N ++
Sbjct: 1806 FGSSHLDVEAVAYKDALLHILRSRRGLLVVGGHGVLKGVLIRGACDAREFVCWLNPRNMR 1865
Query: 787 QIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTLLANGEIPG 846
+I H DF + L+ R + + ES +ES FLE N LL N
Sbjct: 1866 EIFGHRDELTGDFRDSLKVQDLRRNIHGGRECLFIFESIPVESSFLEDFNPLLDNNRFLC 1925
Query: 847 LFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTMNPSSEGLKDRA 906
LF G+E + + + L D+ L + F + +NL VVF+ S +
Sbjct: 1926 LFSGNERIRIPENLRFVFESTSLEKDTEATLTRVFLVYMEENLPVVFSACCSQDTSVLAG 1985
Query: 907 ATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNWKAPDFFPSVCSLVSTTPS 966
SPAL NRC +++ W + Q A + G + + L +
Sbjct: 1986 IRSPALKNRCFIDFKKLWDTEEMSQYANSVETLSRDGGRVFFINGE-------LGVGKGA 2038
Query: 967 --HRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLYREKCSELEE 1024
+A V +S ++ + ++ + + EL+
Sbjct: 2039 LISEVFGDDAVVI-----EGRGFEISMIEG-SLGESKIKFIGGLKVYDARCVIYIEELDC 2092
Query: 1025 QQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEAEKRKVQ 1084
++L G+ K E + E+++ L+ L K + A+ L ++ E E + V
Sbjct: 2093 TNVNLVEGVRKYNEYGRGMGELKEQLSNTVVILGVKEKNADDALSGTPGERLEREVKSVF 2152
Query: 1085 SQDIQAEIEKQTVEIAQKRVFVMEDLAQVEPAVMDAQQAVKEIKKQQLVELRSMANPPSV 1144
+ + + E+ +++ VM+ + +PAV++A V +IKK L E+RS PP
Sbjct: 2153 VEAPRDMLFLLEEEVRKRKGSVMKFKSSKKPAVLEAVLFVYKIKKASLREIRSFIRPPGD 2212
Query: 1145 VKLALESICLLLGENATDWKAIRAVVMRENFINSIVSNFNTEMITD-EVREKMHSRYLSN 1203
+ + +E +C LLG A W + + R++FI I + E+ D E R +R S+
Sbjct: 2213 LCIEMEDVCDLLGFEAKIWFGEQQSLRRDDFIRIIG-KYPDEIEFDLEARRFREARECSD 2271
Query: 1204 PDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEVQASENKAKGEETK 1263
P ++ NRAS ACGP+ +W + + + + +L+ PLR E K ++ +A + + K
Sbjct: 2272 PSFTGSILNRASKACGPLKRWLVRECNRSKVLEVKIPLREEEKRIDGEAFLVEDRLTLGK 2331
Query: 1264 DLITQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAKFYEYAQLIAQATAIKTDLDNVQA 1323
L + L + Y+ I + D+D V
Sbjct: 2332 GLSSDLMTFKLRRRS------------------------YYSLDILRVHGKIADMDTVHK 2367
Query: 1324 KVERSMALLKSLGIERERWEATSETFRSQMATIIGDVLLSSAYLAYAGYFDQHYRQSLFS 1383
V RS+ + + L E W M + GD SS Y G R F
Sbjct: 2368 DVLRSIFVSEILINEDSEWGGVFSEVPKLMVELDGDGHPSSCLHPYIGTLGFLCRAIEF- 2426
Query: 1384 TWNSHLIAAGIQFR-PEIA---LTEYLSSPDERLRWQGNALPSDHLCTENA-IMLRRFNR 1438
I +FR EI E + + S EN+ I +
Sbjct: 2427 --GMSFIRISKEFRDKEIRRRQFITEGVQKIEDFKEEAC---STDYGLENSRIRKDLQDL 2481
Query: 1439 YPLIIDPSGQATEFILKEFESRKITKTSFLDDAFRKNLESALRFGNPLLVQDVENYDTIL 1498
++ DPS + + ++ +K SF + F L A R G+ ++ D E D +
Sbjct: 2482 TAVLNDPSSKIVTSQRQMYDEKKAILGSFREMEFAFGLSQARREGSDKIIGDAEALDEEI 2541
Query: 1499 NPVLNRELRRTGGRVLITLGDQDIDISPTFVIFLSTRDPTVEFPPDICSRVTFVNFTVTR 1558
++ E + V + + +I S +F + + + ++ V F
Sbjct: 2542 GRLIKEEFKSNLSEVKVMINPPEIVRSTVEAVFWLSEGRSGDMGSIEWKQLIQVMFVSKV 2601
Query: 1559 SSLQSQCLNRVLKAERPDIDTKRSDLLKLQGEFHLRLRHLEKSLLGALNESKGKLL 1614
+++ + + K + L L+ L L L + LL L S +
Sbjct: 2602 LGCETEIPDALEKLVSGPLFVHEKALNALKACGSLFLWVLARYLLAKLMLSISNME 2657
|
Length = 3164 |
| >gnl|CDD|193256 pfam12780, AAA_8, P-loop containing dynein motor region D4 | Back alignment and domain information |
|---|
| >gnl|CDD|193253 pfam12777, MT, Microtubule-binding stalk of dynein motor | Back alignment and domain information |
|---|
| >gnl|CDD|193257 pfam12781, AAA_9, ATP-binding dynein motor region D5 | Back alignment and domain information |
|---|
| >gnl|CDD|193251 pfam12775, AAA_7, P-loop containing dynein motor region D3 | Back alignment and domain information |
|---|
| >gnl|CDD|219538 pfam07728, AAA_5, AAA domain (dynein-related subfamily) | Back alignment and domain information |
|---|
| >gnl|CDD|99707 cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >gnl|CDD|214640 smart00382, AAA, ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|99707 cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >gnl|CDD|219538 pfam07728, AAA_5, AAA domain (dynein-related subfamily) | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|222104 pfam13401, AAA_22, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|234252 TIGR03545, TIGR03545, TIGR03545 family protein | Back alignment and domain information |
|---|
| >gnl|CDD|219538 pfam07728, AAA_5, AAA domain (dynein-related subfamily) | Back alignment and domain information |
|---|
| >gnl|CDD|221952 pfam13166, AAA_13, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1614 | |||
| KOG3595|consensus | 1395 | 100.0 | ||
| COG5245 | 3164 | DYN1 Dynein, heavy chain [Cytoskeleton] | 100.0 | |
| PF12780 | 268 | AAA_8: P-loop containing dynein motor region D4; I | 100.0 | |
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 100.0 | |
| PF12781 | 228 | AAA_9: ATP-binding dynein motor region D5; PDB: 3V | 100.0 | |
| PF12775 | 272 | AAA_7: P-loop containing dynein motor region D3; P | 100.0 | |
| COG5271 | 4600 | MDN1 AAA ATPase containing von Willebrand factor t | 100.0 | |
| COG5271 | 4600 | MDN1 AAA ATPase containing von Willebrand factor t | 100.0 | |
| KOG0733|consensus | 802 | 99.8 | ||
| TIGR03345 | 852 | VI_ClpV1 type VI secretion ATPase, ClpV1 family. M | 99.76 | |
| PRK11034 | 758 | clpA ATP-dependent Clp protease ATP-binding subuni | 99.76 | |
| KOG1808|consensus | 1856 | 99.75 | ||
| TIGR02639 | 731 | ClpA ATP-dependent Clp protease ATP-binding subuni | 99.75 | |
| TIGR01650 | 327 | PD_CobS cobaltochelatase, CobS subunit. This model | 99.75 | |
| COG0542 | 786 | clpA ATP-binding subunits of Clp protease and DnaK | 99.73 | |
| TIGR02640 | 262 | gas_vesic_GvpN gas vesicle protein GvpN. Members o | 99.73 | |
| PF12774 | 231 | AAA_6: Hydrolytic ATP binding site of dynein motor | 99.72 | |
| PRK10865 | 857 | protein disaggregation chaperone; Provisional | 99.69 | |
| KOG1808|consensus | 1856 | 99.67 | ||
| CHL00095 | 821 | clpC Clp protease ATP binding subunit | 99.67 | |
| KOG0730|consensus | 693 | 99.59 | ||
| TIGR03346 | 852 | chaperone_ClpB ATP-dependent chaperone ClpB. Membe | 99.58 | |
| PHA02244 | 383 | ATPase-like protein | 99.57 | |
| KOG0736|consensus | 953 | 99.51 | ||
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 99.5 | |
| KOG0735|consensus | 952 | 99.47 | ||
| TIGR01243 | 733 | CDC48 AAA family ATPase, CDC48 subfamily. This sub | 99.44 | |
| TIGR02639 | 731 | ClpA ATP-dependent Clp protease ATP-binding subuni | 99.43 | |
| PRK11034 | 758 | clpA ATP-dependent Clp protease ATP-binding subuni | 99.42 | |
| COG0714 | 329 | MoxR-like ATPases [General function prediction onl | 99.39 | |
| PF07726 | 131 | AAA_3: ATPase family associated with various cellu | 99.34 | |
| KOG0735|consensus | 952 | 99.28 | ||
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 99.27 | |
| COG1222 | 406 | RPT1 ATP-dependent 26S proteasome regulatory subun | 99.24 | |
| PF05496 | 233 | RuvB_N: Holliday junction DNA helicase ruvB N-term | 99.23 | |
| CHL00095 | 821 | clpC Clp protease ATP binding subunit | 99.22 | |
| PRK11331 | 459 | 5-methylcytosine-specific restriction enzyme subun | 99.21 | |
| TIGR01243 | 733 | CDC48 AAA family ATPase, CDC48 subfamily. This sub | 99.19 | |
| COG5245 | 3164 | DYN1 Dynein, heavy chain [Cytoskeleton] | 99.19 | |
| COG1223 | 368 | Predicted ATPase (AAA+ superfamily) [General funct | 99.11 | |
| PLN00020 | 413 | ribulose bisphosphate carboxylase/oxygenase activa | 99.1 | |
| KOG0733|consensus | 802 | 99.1 | ||
| KOG0730|consensus | 693 | 99.06 | ||
| KOG1051|consensus | 898 | 99.03 | ||
| COG2256 | 436 | MGS1 ATPase related to the helicase subunit of the | 99.01 | |
| TIGR00763 | 775 | lon ATP-dependent protease La. This protein is ind | 98.99 | |
| COG0542 | 786 | clpA ATP-binding subunits of Clp protease and DnaK | 98.99 | |
| PF01078 | 206 | Mg_chelatase: Magnesium chelatase, subunit ChlI; I | 98.97 | |
| KOG0741|consensus | 744 | 98.97 | ||
| PHA02244 | 383 | ATPase-like protein | 98.92 | |
| TIGR01650 | 327 | PD_CobS cobaltochelatase, CobS subunit. This model | 98.91 | |
| CHL00195 | 489 | ycf46 Ycf46; Provisional | 98.91 | |
| KOG0734|consensus | 752 | 98.91 | ||
| KOG0727|consensus | 408 | 98.9 | ||
| KOG0738|consensus | 491 | 98.88 | ||
| TIGR02640 | 262 | gas_vesic_GvpN gas vesicle protein GvpN. Members o | 98.86 | |
| PRK10787 | 784 | DNA-binding ATP-dependent protease La; Provisional | 98.86 | |
| TIGR03689 | 512 | pup_AAA proteasome ATPase. In the Actinobacteria, | 98.84 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 98.83 | |
| PTZ00454 | 398 | 26S protease regulatory subunit 6B-like protein; P | 98.83 | |
| COG3829 | 560 | RocR Transcriptional regulator containing PAS, AAA | 98.82 | |
| CHL00206 | 2281 | ycf2 Ycf2; Provisional | 98.8 | |
| CHL00176 | 638 | ftsH cell division protein; Validated | 98.8 | |
| CHL00181 | 287 | cbbX CbbX; Provisional | 98.79 | |
| KOG0736|consensus | 953 | 98.79 | ||
| PRK03992 | 389 | proteasome-activating nucleotidase; Provisional | 98.77 | |
| COG2255 | 332 | RuvB Holliday junction resolvasome, helicase subun | 98.76 | |
| KOG2028|consensus | 554 | 98.76 | ||
| COG0466 | 782 | Lon ATP-dependent Lon protease, bacterial type [Po | 98.74 | |
| TIGR01241 | 495 | FtsH_fam ATP-dependent metalloprotease FtsH. HflB( | 98.73 | |
| PRK00080 | 328 | ruvB Holliday junction DNA helicase RuvB; Reviewed | 98.73 | |
| KOG0731|consensus | 774 | 98.72 | ||
| PRK13407 | 334 | bchI magnesium chelatase subunit I; Provisional | 98.71 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 98.7 | |
| TIGR03345 | 852 | VI_ClpV1 type VI secretion ATPase, ClpV1 family. M | 98.7 | |
| TIGR03346 | 852 | chaperone_ClpB ATP-dependent chaperone ClpB. Membe | 98.69 | |
| KOG2004|consensus | 906 | 98.69 | ||
| PRK13531 | 498 | regulatory ATPase RavA; Provisional | 98.67 | |
| KOG0652|consensus | 424 | 98.67 | ||
| KOG0739|consensus | 439 | 98.66 | ||
| TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family. Many pro | 98.66 | |
| KOG0737|consensus | 386 | 98.65 | ||
| PLN03025 | 319 | replication factor C subunit; Provisional | 98.65 | |
| PTZ00361 | 438 | 26 proteosome regulatory subunit 4-like protein; P | 98.64 | |
| TIGR00635 | 305 | ruvB Holliday junction DNA helicase, RuvB subunit. | 98.63 | |
| COG0464 | 494 | SpoVK ATPases of the AAA+ class [Posttranslational | 98.63 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 98.62 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 98.62 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 98.6 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 98.6 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 98.59 | |
| KOG0740|consensus | 428 | 98.57 | ||
| PRK10733 | 644 | hflB ATP-dependent metalloprotease; Reviewed | 98.57 | |
| PRK11608 | 326 | pspF phage shock protein operon transcriptional ac | 98.57 | |
| PRK13341 | 725 | recombination factor protein RarA/unknown domain f | 98.57 | |
| PRK09862 | 506 | putative ATP-dependent protease; Provisional | 98.56 | |
| TIGR02974 | 329 | phageshock_pspF psp operon transcriptional activat | 98.56 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 98.55 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 98.51 | |
| CHL00195 | 489 | ycf46 Ycf46; Provisional | 98.5 | |
| KOG0726|consensus | 440 | 98.5 | ||
| KOG0742|consensus | 630 | 98.5 | ||
| PRK15424 | 538 | propionate catabolism operon regulatory protein Pr | 98.49 | |
| TIGR02329 | 526 | propionate_PrpR propionate catabolism operon regul | 98.49 | |
| TIGR01817 | 534 | nifA Nif-specific regulatory protein. This model r | 98.48 | |
| smart00350 | 509 | MCM minichromosome maintenance proteins. | 98.48 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 98.47 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 98.47 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 98.47 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 98.46 | |
| COG0606 | 490 | Predicted ATPase with chaperone activity [Posttran | 98.45 | |
| TIGR00368 | 499 | Mg chelatase-related protein. The N-terminal end m | 98.45 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 98.45 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 98.45 | |
| KOG0744|consensus | 423 | 98.45 | ||
| PRK07003 | 830 | DNA polymerase III subunits gamma and tau; Validat | 98.44 | |
| COG0465 | 596 | HflB ATP-dependent Zn proteases [Posttranslational | 98.43 | |
| COG2204 | 464 | AtoC Response regulator containing CheY-like recei | 98.42 | |
| PRK05022 | 509 | anaerobic nitric oxide reductase transcription reg | 98.41 | |
| COG1221 | 403 | PspF Transcriptional regulators containing an AAA- | 98.41 | |
| PRK14960 | 702 | DNA polymerase III subunits gamma and tau; Provisi | 98.41 | |
| KOG0743|consensus | 457 | 98.38 | ||
| PRK10865 | 857 | protein disaggregation chaperone; Provisional | 98.38 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 98.37 | |
| TIGR00382 | 413 | clpX endopeptidase Clp ATP-binding regulatory subu | 98.36 | |
| KOG0728|consensus | 404 | 98.36 | ||
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 98.36 | |
| PRK08691 | 709 | DNA polymerase III subunits gamma and tau; Validat | 98.36 | |
| PRK11388 | 638 | DNA-binding transcriptional regulator DhaR; Provis | 98.35 | |
| COG0464 | 494 | SpoVK ATPases of the AAA+ class [Posttranslational | 98.35 | |
| PRK12323 | 700 | DNA polymerase III subunits gamma and tau; Provisi | 98.34 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 98.34 | |
| KOG0991|consensus | 333 | 98.34 | ||
| PRK10923 | 469 | glnG nitrogen regulation protein NR(I); Provisiona | 98.33 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 98.32 | |
| KOG0996|consensus | 1293 | 98.32 | ||
| PRK15429 | 686 | formate hydrogenlyase transcriptional activator Fh | 98.31 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 98.31 | |
| KOG0729|consensus | 435 | 98.31 | ||
| PRK14949 | 944 | DNA polymerase III subunits gamma and tau; Provisi | 98.28 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 98.28 | |
| TIGR02031 | 589 | BchD-ChlD magnesium chelatase ATPase subunit D. Th | 98.28 | |
| CHL00081 | 350 | chlI Mg-protoporyphyrin IX chelatase | 98.27 | |
| KOG0250|consensus | 1074 | 98.26 | ||
| PRK11331 | 459 | 5-methylcytosine-specific restriction enzyme subun | 98.26 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 98.26 | |
| PF05673 | 249 | DUF815: Protein of unknown function (DUF815); Inte | 98.25 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 98.25 | |
| PRK07994 | 647 | DNA polymerase III subunits gamma and tau; Validat | 98.25 | |
| TIGR02030 | 337 | BchI-ChlI magnesium chelatase ATPase subunit I. Th | 98.24 | |
| PRK10820 | 520 | DNA-binding transcriptional regulator TyrR; Provis | 98.24 | |
| PRK14951 | 618 | DNA polymerase III subunits gamma and tau; Provisi | 98.23 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 98.22 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 98.22 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 98.22 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 98.21 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 98.21 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 98.2 | |
| KOG0732|consensus | 1080 | 98.19 | ||
| COG2256 | 436 | MGS1 ATPase related to the helicase subunit of the | 98.17 | |
| COG1239 | 423 | ChlI Mg-chelatase subunit ChlI [Coenzyme metabolis | 98.17 | |
| TIGR02442 | 633 | Cob-chelat-sub cobaltochelatase subunit. A number | 98.17 | |
| PTZ00111 | 915 | DNA replication licensing factor MCM4; Provisional | 98.16 | |
| PRK06620 | 214 | hypothetical protein; Validated | 98.16 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 98.15 | |
| PRK12422 | 445 | chromosomal replication initiation protein; Provis | 98.14 | |
| KOG0989|consensus | 346 | 98.13 | ||
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 98.12 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 98.12 | |
| PRK08727 | 233 | hypothetical protein; Validated | 98.08 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 98.08 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 98.08 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 98.07 | |
| TIGR02397 | 355 | dnaX_nterm DNA polymerase III, subunit gamma and t | 98.07 | |
| KOG1969|consensus | 877 | 98.07 | ||
| TIGR02915 | 445 | PEP_resp_reg putative PEP-CTERM system response re | 98.06 | |
| PRK14963 | 504 | DNA polymerase III subunits gamma and tau; Provisi | 98.04 | |
| TIGR00678 | 188 | holB DNA polymerase III, delta' subunit. At positi | 98.02 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 98.02 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 98.02 | |
| PF13173 | 128 | AAA_14: AAA domain | 98.01 | |
| PRK14952 | 584 | DNA polymerase III subunits gamma and tau; Provisi | 98.01 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 98.01 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 98.0 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 98.0 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 97.97 | |
| PRK05563 | 559 | DNA polymerase III subunits gamma and tau; Validat | 97.97 | |
| KOG0651|consensus | 388 | 97.97 | ||
| PF00493 | 331 | MCM: MCM2/3/5 family This family extends the MCM d | 97.96 | |
| PRK09087 | 226 | hypothetical protein; Validated | 97.96 | |
| PRK08451 | 535 | DNA polymerase III subunits gamma and tau; Validat | 97.96 | |
| PRK07764 | 824 | DNA polymerase III subunits gamma and tau; Validat | 97.95 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 97.95 | |
| PRK07133 | 725 | DNA polymerase III subunits gamma and tau; Validat | 97.95 | |
| PRK11361 | 457 | acetoacetate metabolism regulatory protein AtoC; P | 97.94 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 97.94 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 97.94 | |
| KOG1051|consensus | 898 | 97.92 | ||
| PRK15115 | 444 | response regulator GlrR; Provisional | 97.91 | |
| PRK07940 | 394 | DNA polymerase III subunit delta'; Validated | 97.9 | |
| PRK14954 | 620 | DNA polymerase III subunits gamma and tau; Provisi | 97.89 | |
| PRK14970 | 367 | DNA polymerase III subunits gamma and tau; Provisi | 97.85 | |
| PRK14953 | 486 | DNA polymerase III subunits gamma and tau; Provisi | 97.85 | |
| PRK14948 | 620 | DNA polymerase III subunits gamma and tau; Provisi | 97.85 | |
| PF06068 | 398 | TIP49: TIP49 C-terminus; InterPro: IPR010339 This | 97.83 | |
| PRK14965 | 576 | DNA polymerase III subunits gamma and tau; Provisi | 97.82 | |
| PF12780 | 268 | AAA_8: P-loop containing dynein motor region D4; I | 97.82 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 97.81 | |
| TIGR00764 | 608 | lon_rel lon-related putative ATP-dependent proteas | 97.79 | |
| PRK06305 | 451 | DNA polymerase III subunits gamma and tau; Validat | 97.77 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 97.77 | |
| TIGR01818 | 463 | ntrC nitrogen regulation protein NR(I). This model | 97.77 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 97.76 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 97.76 | |
| PRK06647 | 563 | DNA polymerase III subunits gamma and tau; Validat | 97.75 | |
| KOG0979|consensus | 1072 | 97.75 | ||
| PRK14971 | 614 | DNA polymerase III subunits gamma and tau; Provisi | 97.73 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 97.71 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 97.69 | |
| COG3604 | 550 | FhlA Transcriptional regulator containing GAF, AAA | 97.68 | |
| COG1224 | 450 | TIP49 DNA helicase TIP49, TBP-interacting protein | 97.67 | |
| PRK07003 | 830 | DNA polymerase III subunits gamma and tau; Validat | 97.66 | |
| COG1219 | 408 | ClpX ATP-dependent protease Clp, ATPase subunit [P | 97.65 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 97.65 | |
| PRK13406 | 584 | bchD magnesium chelatase subunit D; Provisional | 97.64 | |
| PRK04132 | 846 | replication factor C small subunit; Provisional | 97.64 | |
| KOG0480|consensus | 764 | 97.64 | ||
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 97.62 | |
| smart00763 | 361 | AAA_PrkA PrkA AAA domain. This is a family of PrkA | 97.62 | |
| PF05496 | 233 | RuvB_N: Holliday junction DNA helicase ruvB N-term | 97.61 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 97.58 | |
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 97.57 | |
| COG2607 | 287 | Predicted ATPase (AAA+ superfamily) [General funct | 97.56 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 97.55 | |
| PF05729 | 166 | NACHT: NACHT domain | 97.55 | |
| KOG0478|consensus | 804 | 97.55 | ||
| KOG0994|consensus | 1758 | 97.54 | ||
| PRK10365 | 441 | transcriptional regulatory protein ZraR; Provision | 97.53 | |
| PRK14960 | 702 | DNA polymerase III subunits gamma and tau; Provisi | 97.53 | |
| PLN00020 | 413 | ribulose bisphosphate carboxylase/oxygenase activa | 97.52 | |
| COG0593 | 408 | DnaA ATPase involved in DNA replication initiation | 97.51 | |
| PRK13341 | 725 | recombination factor protein RarA/unknown domain f | 97.51 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 97.48 | |
| KOG1969|consensus | 877 | 97.47 | ||
| TIGR00390 | 441 | hslU ATP-dependent protease HslVU, ATPase subunit. | 97.47 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 97.45 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 97.44 | |
| PRK08181 | 269 | transposase; Validated | 97.44 | |
| KOG1514|consensus | 767 | 97.44 | ||
| PRK12323 | 700 | DNA polymerase III subunits gamma and tau; Provisi | 97.41 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 97.4 | |
| PRK14963 | 504 | DNA polymerase III subunits gamma and tau; Provisi | 97.39 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 97.38 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.38 | |
| COG1241 | 682 | MCM2 Predicted ATPase involved in replication cont | 97.38 | |
| CHL00181 | 287 | cbbX CbbX; Provisional | 97.37 | |
| PRK08116 | 268 | hypothetical protein; Validated | 97.36 | |
| PF14532 | 138 | Sigma54_activ_2: Sigma-54 interaction domain; PDB: | 97.35 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 97.35 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 97.34 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 97.34 | |
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 97.32 | |
| PRK07471 | 365 | DNA polymerase III subunit delta'; Validated | 97.31 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 97.31 | |
| PF12775 | 272 | AAA_7: P-loop containing dynein motor region D3; P | 97.31 | |
| PRK14949 | 944 | DNA polymerase III subunits gamma and tau; Provisi | 97.3 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 97.3 | |
| PRK05201 | 443 | hslU ATP-dependent protease ATP-binding subunit Hs | 97.29 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 97.28 | |
| PRK07994 | 647 | DNA polymerase III subunits gamma and tau; Validat | 97.28 | |
| TIGR00602 | 637 | rad24 checkpoint protein rad24. This family is bas | 97.26 | |
| COG3283 | 511 | TyrR Transcriptional regulator of aromatic amino a | 97.23 | |
| PRK13765 | 637 | ATP-dependent protease Lon; Provisional | 97.23 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 97.23 | |
| PRK06526 | 254 | transposase; Provisional | 97.22 | |
| TIGR00763 | 775 | lon ATP-dependent protease La. This protein is ind | 97.22 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 97.21 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 97.21 | |
| COG0470 | 325 | HolB ATPase involved in DNA replication [DNA repli | 97.21 | |
| PF13177 | 162 | DNA_pol3_delta2: DNA polymerase III, delta subunit | 97.21 | |
| PRK07764 | 824 | DNA polymerase III subunits gamma and tau; Validat | 97.21 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 97.21 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 97.21 | |
| PRK08058 | 329 | DNA polymerase III subunit delta'; Validated | 97.2 | |
| COG3284 | 606 | AcoR Transcriptional activator of acetoin/glycerol | 97.2 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 97.19 | |
| PRK05707 | 328 | DNA polymerase III subunit delta'; Validated | 97.19 | |
| COG2812 | 515 | DnaX DNA polymerase III, gamma/tau subunits [DNA r | 97.18 | |
| KOG0933|consensus | 1174 | 97.18 | ||
| KOG0976|consensus | 1265 | 97.17 | ||
| KOG2227|consensus | 529 | 97.16 | ||
| PRK10787 | 784 | DNA-binding ATP-dependent protease La; Provisional | 97.15 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 97.14 | |
| TIGR00635 | 305 | ruvB Holliday junction DNA helicase, RuvB subunit. | 97.13 | |
| PRK14953 | 486 | DNA polymerase III subunits gamma and tau; Provisi | 97.13 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 97.12 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 97.11 | |
| KOG0995|consensus | 581 | 97.1 | ||
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 97.08 | |
| KOG0994|consensus | 1758 | 97.08 | ||
| PF07693 | 325 | KAP_NTPase: KAP family P-loop domain; InterPro: IP | 97.07 | |
| PRK14951 | 618 | DNA polymerase III subunits gamma and tau; Provisi | 97.05 | |
| PRK08691 | 709 | DNA polymerase III subunits gamma and tau; Validat | 97.04 | |
| KOG0731|consensus | 774 | 97.04 | ||
| KOG0482|consensus | 721 | 97.02 | ||
| KOG0933|consensus | 1174 | 97.01 | ||
| KOG2028|consensus | 554 | 97.0 | ||
| KOG0745|consensus | 564 | 97.0 | ||
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 96.99 | |
| PRK03992 | 389 | proteasome-activating nucleotidase; Provisional | 96.94 | |
| PRK08699 | 325 | DNA polymerase III subunit delta'; Validated | 96.92 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.91 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 96.89 | |
| PRK00080 | 328 | ruvB Holliday junction DNA helicase RuvB; Reviewed | 96.87 | |
| KOG2035|consensus | 351 | 96.87 | ||
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 96.86 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 96.84 | |
| KOG0734|consensus | 752 | 96.84 | ||
| PF13177 | 162 | DNA_pol3_delta2: DNA polymerase III, delta subunit | 96.84 | |
| TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family. Many pro | 96.84 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 96.82 | |
| PRK14952 | 584 | DNA polymerase III subunits gamma and tau; Provisi | 96.81 | |
| PTZ00454 | 398 | 26S protease regulatory subunit 6B-like protein; P | 96.8 | |
| PRK14954 | 620 | DNA polymerase III subunits gamma and tau; Provisi | 96.8 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 96.79 | |
| TIGR00678 | 188 | holB DNA polymerase III, delta' subunit. At positi | 96.78 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.78 | |
| PRK05564 | 313 | DNA polymerase III subunit delta'; Validated | 96.78 | |
| COG1222 | 406 | RPT1 ATP-dependent 26S proteasome regulatory subun | 96.77 | |
| PF01637 | 234 | Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 | 96.77 | |
| PTZ00361 | 438 | 26 proteosome regulatory subunit 4-like protein; P | 96.76 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 96.76 | |
| PF03969 | 362 | AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 | 96.74 | |
| COG0470 | 325 | HolB ATPase involved in DNA replication [DNA repli | 96.73 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 96.72 | |
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 96.72 | |
| PRK14965 | 576 | DNA polymerase III subunits gamma and tau; Provisi | 96.68 | |
| TIGR00382 | 413 | clpX endopeptidase Clp ATP-binding regulatory subu | 96.68 | |
| PRK07133 | 725 | DNA polymerase III subunits gamma and tau; Validat | 96.68 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.67 | |
| PRK05707 | 328 | DNA polymerase III subunit delta'; Validated | 96.67 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 96.66 | |
| TIGR02397 | 355 | dnaX_nterm DNA polymerase III, subunit gamma and t | 96.66 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 96.66 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.64 | |
| KOG0477|consensus | 854 | 96.63 | ||
| TIGR02030 | 337 | BchI-ChlI magnesium chelatase ATPase subunit I. Th | 96.62 | |
| CHL00176 | 638 | ftsH cell division protein; Validated | 96.61 | |
| PRK08769 | 319 | DNA polymerase III subunit delta'; Validated | 96.6 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 96.59 | |
| KOG0738|consensus | 491 | 96.58 | ||
| PRK09183 | 259 | transposase/IS protein; Provisional | 96.58 | |
| PRK06305 | 451 | DNA polymerase III subunits gamma and tau; Validat | 96.57 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 96.55 | |
| KOG0990|consensus | 360 | 96.55 | ||
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 96.54 | |
| PF14516 | 331 | AAA_35: AAA-like domain | 96.54 | |
| PRK06964 | 342 | DNA polymerase III subunit delta'; Validated | 96.53 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 96.53 | |
| KOG0250|consensus | 1074 | 96.52 | ||
| COG1223 | 368 | Predicted ATPase (AAA+ superfamily) [General funct | 96.52 | |
| PRK08451 | 535 | DNA polymerase III subunits gamma and tau; Validat | 96.52 | |
| PF07726 | 131 | AAA_3: ATPase family associated with various cellu | 96.51 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 96.51 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 96.51 | |
| PRK14948 | 620 | DNA polymerase III subunits gamma and tau; Provisi | 96.5 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.5 | |
| KOG0161|consensus | 1930 | 96.49 | ||
| PRK07940 | 394 | DNA polymerase III subunit delta'; Validated | 96.45 | |
| PRK06964 | 342 | DNA polymerase III subunit delta'; Validated | 96.45 | |
| PRK05564 | 313 | DNA polymerase III subunit delta'; Validated | 96.44 | |
| PRK06871 | 325 | DNA polymerase III subunit delta'; Validated | 96.43 | |
| PRK07399 | 314 | DNA polymerase III subunit delta'; Validated | 96.43 | |
| PRK13531 | 498 | regulatory ATPase RavA; Provisional | 96.43 | |
| PRK06871 | 325 | DNA polymerase III subunit delta'; Validated | 96.42 | |
| PRK06647 | 563 | DNA polymerase III subunits gamma and tau; Validat | 96.42 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 96.41 | |
| TIGR02688 | 449 | conserved hypothetical protein TIGR02688. Members | 96.41 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.4 | |
| COG0714 | 329 | MoxR-like ATPases [General function prediction onl | 96.37 | |
| PRK08769 | 319 | DNA polymerase III subunit delta'; Validated | 96.37 | |
| TIGR01241 | 495 | FtsH_fam ATP-dependent metalloprotease FtsH. HflB( | 96.36 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 96.32 | |
| COG0466 | 782 | Lon ATP-dependent Lon protease, bacterial type [Po | 96.31 | |
| KOG2680|consensus | 454 | 96.3 | ||
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 96.29 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 96.28 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 96.27 | |
| PRK05563 | 559 | DNA polymerase III subunits gamma and tau; Validat | 96.26 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 96.25 | |
| cd01128 | 249 | rho_factor Transcription termination factor rho is | 96.25 | |
| KOG2004|consensus | 906 | 96.23 | ||
| TIGR00602 | 637 | rad24 checkpoint protein rad24. This family is bas | 96.23 | |
| PRK07399 | 314 | DNA polymerase III subunit delta'; Validated | 96.22 | |
| PF01695 | 178 | IstB_IS21: IstB-like ATP binding protein; InterPro | 96.22 | |
| PHA02774 | 613 | E1; Provisional | 96.21 | |
| PRK06090 | 319 | DNA polymerase III subunit delta'; Validated | 96.2 | |
| PRK07471 | 365 | DNA polymerase III subunit delta'; Validated | 96.19 | |
| KOG2543|consensus | 438 | 96.19 | ||
| COG4650 | 531 | RtcR Sigma54-dependent transcription regulator con | 96.19 | |
| PRK12422 | 445 | chromosomal replication initiation protein; Provis | 96.17 | |
| PRK13407 | 334 | bchI magnesium chelatase subunit I; Provisional | 96.15 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 96.13 | |
| PF12774 | 231 | AAA_6: Hydrolytic ATP binding site of dynein motor | 96.12 | |
| KOG0729|consensus | 435 | 96.1 | ||
| PF00931 | 287 | NB-ARC: NB-ARC domain; InterPro: IPR002182 This is | 96.09 | |
| COG1219 | 408 | ClpX ATP-dependent protease Clp, ATPase subunit [P | 96.09 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.08 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 96.07 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 96.06 | |
| KOG2228|consensus | 408 | 96.06 | ||
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 96.0 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 95.99 | |
| PRK05917 | 290 | DNA polymerase III subunit delta'; Validated | 95.99 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 95.98 | |
| PRK13808 | 333 | adenylate kinase; Provisional | 95.96 | |
| PF05621 | 302 | TniB: Bacterial TniB protein; InterPro: IPR008868 | 95.96 | |
| PRK06921 | 266 | hypothetical protein; Provisional | 95.95 | |
| KOG1970|consensus | 634 | 95.93 | ||
| PRK00409 | 782 | recombination and DNA strand exchange inhibitor pr | 95.93 | |
| KOG0976|consensus | 1265 | 95.9 | ||
| PRK10536 | 262 | hypothetical protein; Provisional | 95.9 | |
| COG2255 | 332 | RuvB Holliday junction resolvasome, helicase subun | 95.88 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 95.88 | |
| PRK14971 | 614 | DNA polymerase III subunits gamma and tau; Provisi | 95.88 | |
| CHL00206 | 2281 | ycf2 Ycf2; Provisional | 95.84 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.83 | |
| PRK12377 | 248 | putative replication protein; Provisional | 95.82 | |
| KOG0161|consensus | 1930 | 95.82 | ||
| PF01637 | 234 | Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 | 95.82 | |
| PF01078 | 206 | Mg_chelatase: Magnesium chelatase, subunit ChlI; I | 95.8 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 95.8 | |
| TIGR03689 | 512 | pup_AAA proteasome ATPase. In the Actinobacteria, | 95.78 | |
| PRK14970 | 367 | DNA polymerase III subunits gamma and tau; Provisi | 95.78 | |
| PRK06090 | 319 | DNA polymerase III subunit delta'; Validated | 95.77 | |
| KOG0743|consensus | 457 | 95.74 | ||
| TIGR01069 | 771 | mutS2 MutS2 family protein. Function of MutS2 is u | 95.73 | |
| PRK07993 | 334 | DNA polymerase III subunit delta'; Validated | 95.73 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 95.69 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 95.69 | |
| KOG1029|consensus | 1118 | 95.67 | ||
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 95.67 | |
| PRK08727 | 233 | hypothetical protein; Validated | 95.65 | |
| PRK10733 | 644 | hflB ATP-dependent metalloprotease; Reviewed | 95.62 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 95.6 | |
| KOG0739|consensus | 439 | 95.6 | ||
| TIGR00041 | 195 | DTMP_kinase thymidylate kinase. Function: phosphor | 95.6 | |
| CHL00081 | 350 | chlI Mg-protoporyphyrin IX chelatase | 95.59 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 95.58 | |
| COG1484 | 254 | DnaC DNA replication protein [DNA replication, rec | 95.58 | |
| PF13173 | 128 | AAA_14: AAA domain | 95.57 | |
| PRK08116 | 268 | hypothetical protein; Validated | 95.57 | |
| PF05673 | 249 | DUF815: Protein of unknown function (DUF815); Inte | 95.56 | |
| PRK05201 | 443 | hslU ATP-dependent protease ATP-binding subunit Hs | 95.54 | |
| KOG0980|consensus | 980 | 95.53 | ||
| COG3267 | 269 | ExeA Type II secretory pathway, component ExeA (pr | 95.51 | |
| KOG0978|consensus | 698 | 95.49 | ||
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 95.46 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 95.46 | |
| PRK07993 | 334 | DNA polymerase III subunit delta'; Validated | 95.45 | |
| TIGR00767 | 415 | rho transcription termination factor Rho. Members | 95.43 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 95.43 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 95.39 | |
| PRK09376 | 416 | rho transcription termination factor Rho; Provisio | 95.38 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 95.37 | |
| TIGR00390 | 441 | hslU ATP-dependent protease HslVU, ATPase subunit. | 95.35 | |
| KOG0727|consensus | 408 | 95.34 | ||
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 95.33 | |
| PRK12377 | 248 | putative replication protein; Provisional | 95.3 | |
| PRK13948 | 182 | shikimate kinase; Provisional | 95.3 | |
| PRK07132 | 299 | DNA polymerase III subunit delta'; Validated | 95.27 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.27 | |
| PRK09087 | 226 | hypothetical protein; Validated | 95.26 | |
| PRK08939 | 306 | primosomal protein DnaI; Reviewed | 95.25 | |
| KOG3595|consensus | 1395 | 95.22 | ||
| KOG3347|consensus | 176 | 95.19 | ||
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 95.11 | |
| COG1116 | 248 | TauB ABC-type nitrate/sulfonate/bicarbonate transp | 95.1 | |
| PF05621 | 302 | TniB: Bacterial TniB protein; InterPro: IPR008868 | 95.1 | |
| COG3911 | 183 | Predicted ATPase [General function prediction only | 95.09 | |
| PRK08699 | 325 | DNA polymerase III subunit delta'; Validated | 95.07 | |
| TIGR00368 | 499 | Mg chelatase-related protein. The N-terminal end m | 95.02 | |
| KOG0989|consensus | 346 | 95.02 | ||
| PRK08181 | 269 | transposase; Validated | 95.01 | |
| PF05729 | 166 | NACHT: NACHT domain | 94.98 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 94.97 | |
| PRK05818 | 261 | DNA polymerase III subunit delta'; Validated | 94.97 | |
| PRK06620 | 214 | hypothetical protein; Validated | 94.94 | |
| KOG0652|consensus | 424 | 94.92 | ||
| PRK12608 | 380 | transcription termination factor Rho; Provisional | 94.91 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 94.91 | |
| KOG0991|consensus | 333 | 94.9 | ||
| KOG0977|consensus | 546 | 94.9 | ||
| KOG0741|consensus | 744 | 94.88 | ||
| COG0465 | 596 | HflB ATP-dependent Zn proteases [Posttranslational | 94.87 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 94.87 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 94.85 | |
| KOG0651|consensus | 388 | 94.84 | ||
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 94.82 | |
| KOG1970|consensus | 634 | 94.81 |
| >KOG3595|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-161 Score=1631.30 Aligned_cols=1233 Identities=42% Similarity=0.724 Sum_probs=1159.2
Q ss_pred hHHHHHHHHHHhhhcccCCCccchHHHHHHHhhhccccCCCCCCCeeEEEEecCCCceeecCCCCccccccccccCCcce
Q psy568 316 RYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLPATSSDIVDFEVNIKNGEWVPWSNKVPQIEVETQKVAASDV 395 (1614)
Q Consensus 316 ~~~~~~f~fa~~Ws~gg~l~~~~r~~f~~~l~~~~~~~~p~~~~~v~d~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 395 (1614)
.++...|+||++|++||.+..+.|..|..+++.... .+++||++...+.|.+|.+.++ +... .+.. ++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~--~~ 106 (1395)
T KOG3595|consen 39 SHLERLFLFALIWALGGDLDADSREKFREFLRRLIN--------IIDLYYIDEEIGDWEPWIDKVP-FELL-EDHE--DI 106 (1395)
T ss_pred HHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHh--------hhhheeeeeccccccchhhhCc-cccc-cccc--ce
Confidence 467789999999999999999999999999999765 5788889999999999999999 5433 2333 99
Q ss_pred eeeCcchhhHHHHHHHHHhcCCCEEEecCCCCchHHHHHHHHhcCCCCceEEEEcccCCCHHHHHhHhhcccceeecCCc
Q psy568 396 VVPTLDTVRHESLLYTWLAEHKPLVLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPNG 475 (1614)
Q Consensus 396 ~vpT~~t~r~~~ll~~~l~~~~~vLL~Gp~GtGKT~lv~~~~~~l~~~~~~~i~~s~~t~~~~l~~~~~~~~~~~~~~~g 475 (1614)
+|||.||+|+.+++..++..+++++++||+|+|||.++...+.......+..++||..|++..++..+++.++++.. |
T Consensus 107 ~v~t~dt~r~~~~~~~~~~~~k~~~~~g~~g~gk~~~~~~~~~~~~~~~~~~~~fs~~ts~~~~q~~~~~~~~k~~~--~ 184 (1395)
T KOG3595|consen 107 LVPTIDTVRYDRLLKLLLAHGKPVLLVGPTGTGKTVLVLSELRSLQDREVYLLNFSSVTSSELLQEIIESKLDKRRS--G 184 (1395)
T ss_pred ecCccceeeHHHHHHHHHHhCCeEEEEcCCCCCeeeehHHHHHhcccchheEEeeeeeccHHHHHHHHHHHHHHhcc--c
Confidence 99999999999999999999999999999999999999999988765554449999999999999999999988773 4
Q ss_pred cccccccCCceEEEEeccCCCCCccccCcccHHHHHHHHHHcCceeeCCCCceEeecCeEEEEeecCCCCCCCCCCcccc
Q psy568 476 VILSPIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGACNPPTDPGRKPLSHRF 555 (1614)
Q Consensus 476 ~~~~p~~~gk~~vlfiDdin~p~~d~~g~q~~lelLrqlld~~~~~~~~~~~~~~~~~~~~iaa~n~~~~~g~~~l~~r~ 555 (1614)
. ++|. .++++++|+||+|||..|.||+|++++++||+++++|||++....|..+.++++++|||||+ +||+++++||
T Consensus 185 ~-~~~~-~~~~~~~f~ddinmp~~~~yg~q~~~~~lrq~~e~~g~~~~~~~~~~~i~~i~~~~a~~~~~-~gr~~i~~r~ 261 (1395)
T KOG3595|consen 185 N-YGPP-LGKKLVLFVDDINMPALDKYGDQPPIELLRQMLEHGGFYDRKKSEWVEIENVQLVGAMNPPG-GGRNDITERF 261 (1395)
T ss_pred C-CCCC-CCceeEEEEeccCCchhhhcCCccHHHHHHHHHHhceeecccccceeEEeeeEEEeecCCCC-CccCcccHHH
Confidence 4 5554 69999999999999999999999999999999999999998889999999999999999965 8999999999
Q ss_pred cccccEEEecCCChhHHHHHHHHHHHhhhhcchhhhhhHHHHHHHHHHHHHHHHhhcCC-CCCCccccChhhHHHHhhhh
Q psy568 556 LRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTNAMVELYLASQEKFTQ-DMQPHYVYSPREMTRWVRGI 634 (1614)
Q Consensus 556 ~r~f~~i~i~~p~~~~l~~I~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~hY~F~lRdl~~v~~~i 634 (1614)
.|||.+++++.|+.+++..||+.++..+..+.+........++++++.+|......+.+ +.++||.||+||+++|++|+
T Consensus 262 ~r~f~~~~~~~~~~~sl~~if~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~hyv~~lrd~~r~~~~i 341 (1395)
T KOG3595|consen 262 LRHFLIVSLNYPSQESLTQIFNTILTGHLRFAPAFRTSIEPIVNASVDFYPKVQENFLPTPSKSHYVFNLRDLSRVVQGI 341 (1395)
T ss_pred HHHeeeEeeCCCChhhHHHHHHHHHhcccCccHHHHHhHHHHHHHHHHHHHHHHHhcCCCCCcceeeechhhhhhheeeh
Confidence 99999999999999999999999999987766777777999999999999999988875 78899999999999999999
Q ss_pred hcccCCCccCCHHHHHHHHHHhhhhhhcccCCChhHHHHHHHHHHHHHHhhcCCcchhhcccCceeccCCcCC---Cccc
Q psy568 635 CEAIRPLESLTVEGLVRLWAHEALRLFQDRLVNDVERQWTNENIDAVAMKYFSNIDKEVLARPILYSNWLSKN---YVPV 711 (1614)
Q Consensus 635 ~~~~~~~~~~~~~~l~~lw~hE~~Rvf~DRL~~~~d~~~~~~~l~~~~~~~f~~~~~~~~~~~~~~~~~~~~~---~~~v 711 (1614)
..+. +....+...++++|+||+.|||.|||++.+|+.|+.+.+...+..+|.... ...|..|+++.... |.++
T Consensus 342 ~~~~-~~~~~~~~~l~~~~~~e~~rv~~drlv~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~y~~~ 417 (1395)
T KOG3595|consen 342 LLAV-SEALLTLEDLIRLWVHEAIRVFADRLVDDEDRQWFDKKLQEVLLKLFEADS---LQMPLLYGDFRSESHKIYEEV 417 (1395)
T ss_pred cccC-cHhhccHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHhhhhh---hcCCceeeecccccccccCch
Confidence 9986 777888999999999999999999999999999999999999999997654 56678888887744 6666
Q ss_pred Ch-hHHHHHHHHHHHHHH-hhhcccchhhHHHHHHHHHHHHHHhccCCccEEEeecCCCChHHHHHHHHHHcCCeEEEEE
Q psy568 712 GT-TELREYVQARLKVFY-EEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAFMNGLSVFQIR 789 (1614)
Q Consensus 712 ~~-~~l~~~~~~~l~~~~-~~~~~~~lvlf~~~i~hi~ri~Ril~~p~gh~LLvG~~GsGKtsl~rlaA~~~~~~~~~i~ 789 (1614)
.. +.++..+...+..|+ .+...|++|+|.+++.|+.|+.|++++|+||++|+|.+|+||++++|++++++++.+++++
T Consensus 418 ~~~~~l~~~~~~~l~~~~~~~~~~~~lvlf~~~~~h~~ri~ril~~~~g~~llvgv~g~gkqsl~r~~~~~~~~~~fq~~ 497 (1395)
T KOG3595|consen 418 LSVELLRGVLEAYLKQFNIEEIRPMHLVLFRDAIEHVLRIDRILRQPRGHALLVGVGGSGKQSLTRLAAFINGLSVFQIE 497 (1395)
T ss_pred HhHHHHHHHHHHHHHHHhhhccCCCceeeeHHHhhhhhhhHHHhcCCCccEEEeecCCCCcccHHHHHHhhccccceeee
Confidence 54 667777778888888 6678899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCChhcHHHHHHHHHHHhccCCCcEEEEEcCCcccccchHHHHHHhhccCCCCCCCChhhHHHHHHHhHHHHHHcC-
Q psy568 790 AHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTLLANGEIPGLFEGDEYTTLMTQCKEGAQREG- 868 (1614)
Q Consensus 790 ~~~~~~~~df~~~lk~~l~~ag~~~~~~v~ll~d~~i~~~~~le~in~lL~~G~v~~Lf~~eE~~~i~~~~~~~~~~~~- 868 (1614)
.+++|+..+|+++++.+++.+|.++++++|+++|.++.++.|+|+||++|++|++|+||.+||++.++..........+
T Consensus 498 ~~~~y~~~~~~~dl~~~~r~~g~~~~~~~f~~~~~~i~~e~fle~ln~ll~~gevp~lf~~de~~~~~~~~~~~~~~~~~ 577 (1395)
T KOG3595|consen 498 ITRSYNIEDFREDLKAILRKAGLKNKETVFILTDSQIKDESFLEDLNNLLASGEVPNLFTGDELDEIKMELAGEMGEEAK 577 (1395)
T ss_pred ccccCcHHHHHHHHHHHHHHhccCCCceEEeechHHHHHHHHHHHHHHHHhCCCCCCccchHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999997777666665554
Q ss_pred CCCCCHHHHHHHHHHHHhhcceEEEEECCCChhhHHHhhhCccccccceecccCCCcHHHHHHHHHHhhcccCCCCCCCC
Q psy568 869 LMLDSNEELYKWFTQQVMKNLHVVFTMNPSSEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNW 948 (1614)
Q Consensus 869 ~~~~s~~~l~~~f~~rv~~nlhivl~~sp~~~~~r~~~~~~PaL~~~~~i~wf~~W~~eaL~~va~~~l~~~~~~~~~~~ 948 (1614)
...++.+++|.||+.|++.|+|+|++++|+|+.||.|.+.||+++|||+||||++||.+++.+|+..++.+.....+
T Consensus 578 ~~~~s~e~~~~~f~~~~~~~l~~vl~~~~~g~~~~~r~~~~pal~~~~~i~w~~~w~~~al~~v~~~~l~~~~~~~~--- 654 (1395)
T KOG3595|consen 578 LILDSRENLYLFFIFRVRRNLHVVLSVSPVGDAFRLRARKFPALVNRCTIDWFDSWPTEALLSVAEEFLASQDILSP--- 654 (1395)
T ss_pred ccCccHHHHHHHHHHHHHHhcceeEEeCchhhHHHHHHHhChhhhccchhhhcccCCHHHHHHHHHHHHhhhcCCCc---
Confidence 45689999999999999999999999999999999999999999999999999999999999999999987665432
Q ss_pred CCCCCCcccccccCCCcchhHHHHHHHHHHHhcHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy568 949 KAPDFFPSVCSLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLYREKCSELEEQQLH 1028 (1614)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~r~~~~tp~~yl~~l~~f~~l~~~k~~~~~~~~~~ 1028 (1614)
...+..+...+..+|.++.+.+..|+...+|++|+||++|++|+++|..++++|++++..+..|
T Consensus 655 ----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~tp~~~l~~i~~f~~ll~~k~~~~~~~~~r 718 (1395)
T KOG3595|consen 655 ----------------SEKRGAISLTMILFHETVLESFASYFDRLSRHNYVTPTSYLEFIGTFKKLLKEKRSEVRLRKLR 718 (1395)
T ss_pred ----------------ccccchhhhhhhhhhhhHHHHhHHHHHhcCceeecCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2235678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy568 1029 LNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEAEKRKVQSQDIQAEIEKQTVEIAQKRVFVME 1108 (1614)
Q Consensus 1029 l~~gL~kl~~~~~~v~~l~~~L~~~~~~l~~~~~~~~~~l~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 1108 (1614)
+..||+||.++.++|+.|+.+|..+++++..+.+++++.+.++..+.++++.++..+.+.+++.+++...+...+++|++
T Consensus 719 ~~~gl~kl~~a~~~v~~l~~~l~~~~~el~~~~~~a~~~l~~i~~~~~~~e~~k~~v~~~e~~~~~~~~~~~~~k~~v~~ 798 (1395)
T KOG3595|consen 719 LELGLDKLKEAGEQVAGLQKELAALQPELQVKSKEANDVLAKILKETQAAEAQKEAVLEDEKKAQEKAGLIQAQKAEVEE 798 (1395)
T ss_pred HHhhhHHhhHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhhhhHHHhhcCCCCcHHHHHHHHHHHHhcC-CCCCCHHHHHHHhchhh-hHHHHHhhcCCC
Q psy568 1109 DLAQVEPAVMDAQQAVKEIKKQQLVELRSMANPPSVVKLALESICLLLG-ENATDWKAIRAVVMREN-FINSIVSNFNTE 1186 (1614)
Q Consensus 1109 ~l~~a~p~l~~A~~al~~l~~~dl~Eirs~~~PP~~V~~v~eavc~Llg-~~~~~W~~~k~~l~~~~-F~~~l~~~~d~~ 1186 (1614)
++++|+|++++|.+++++|++.|+.++|+|.+||.+|+.+|+|||+|+| ...++|.++.++|.+.+ |+..+. +|+++
T Consensus 799 ~l~~a~P~leeA~aal~ti~k~~l~~lks~~~PP~~Vk~~meavciLlg~~~~~~w~~~~~~~~~~~~fl~~l~-~~~~~ 877 (1395)
T KOG3595|consen 799 DLEEAEPALEEASAALSTIKKADLSELKSMKNPPHAVKLVMEAVCILLGRLSSTDWKNISKLLLSDDFFLIILR-EFDKD 877 (1395)
T ss_pred HHhhhhHHHHHHHHHHhcCChhhHHHHHhcCCCcHHHHHHHHHHHHHhccccCCChHHHHHHhhcccHHHHHhh-cCccc
Confidence 9999999999999999999999999999999999999999999999999 44467888877777765 888887 99999
Q ss_pred CCcHHHHHHHHhhhcCCCCCCHHHHHhhhhchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy568 1187 MITDEVREKMHSRYLSNPDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEVQASENKAKGEETKDLI 1266 (1614)
Q Consensus 1187 ~i~~~~~~~l~~~~~~~~~f~~~~~~~~S~aa~~L~~Wv~Ai~~y~~v~~~v~P~~~~l~~~~~~~~~~~~~l~~~~~~l 1266 (1614)
++++.+.+.+.+.|+++|+|.|+.+.++|.||++||.||.|+..|+++++.|+|++.++++++.+.....+++++...++
T Consensus 878 ~i~~~~~k~i~~~~~~~p~f~~~~v~~~s~a~~~l~~wv~a~~~~~kv~~~v~p~~~~~~~~e~~~~~~~~~l~~~~~~l 957 (1395)
T KOG3595|consen 878 EIPEEIMKLIKKFYFQNPDFVPEKVNRASLACEGLCLWVIAIDKYSKVLKVVEPKRQELARLEAELKAAMKELEEKSAEL 957 (1395)
T ss_pred cChHHHHHHHHHhhcCCccCCHHHHHhhhhhhhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Q psy568 1267 TQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAKFYEYAQLIAQATAIKTDLDNVQAKVERSMALLKSLGIERERWEATS 1346 (1614)
Q Consensus 1267 ~~~e~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~rl~~a~~l~~~L~~e~~rW~~~~ 1346 (1614)
.+++++++.+++++++...+.+.+ +.++..++.|+.+|.+|+.+|++|+.||....
T Consensus 958 ~~~e~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~k~~~a~~Li~~Ls~e~~rW~~~~ 1013 (1395)
T KOG3595|consen 958 QDLEEKLQRLKDEYEQLIAEKQEL------------------------EEDMDACELKLLRAEELIQGLSGEKERWSETS 1013 (1395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 999999999999999887776666 77888999999999999999999999999999
Q ss_pred HHHHHhhhhchhHHHHHHHHHHhhcccCHHhHHHHHHHHHHHHHhccCCCCCCCchhcccCCHHHHHhhhhcCCCCChhh
Q psy568 1347 ETFRSQMATIIGDVLLSSAYLAYAGYFDQHYRQSLFSTWNSHLIAAGIQFRPEIALTEYLSSPDERLRWQGNALPSDHLC 1426 (1614)
Q Consensus 1347 ~~~~~~~~~l~gd~ll~aa~i~Y~G~f~~~~R~~l~~~w~~~l~~~~I~~~~~~~~~~~l~~~~~~~~w~~~gLp~d~~s 1426 (1614)
+.+..+...++||+++++++++|+|+|+..+|..++..|...+....+ +.+++++..+++++.++..|...|+|.|.++
T Consensus 1014 ~~~~~~~~~l~gd~ll~~~~~~y~g~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~w~~~~lp~~~~s 1092 (1395)
T KOG3595|consen 1014 EQFSKQYSRLVGDVLLSSAFVAYLGAFDQLYRQSLLRLWESLCTQLKI-VLSNFSLISMLVDPTEILNWNIRGLPADDLS 1092 (1395)
T ss_pred HHHHHHHhhhhHHHHhhhhhhhhccccCHHHHHHHHHHhHHhcCcccc-cccccchHhhcCchHhhcchhhccCcccccc
Confidence 999999999999999999999999999999999999999999998888 8899999999999999999999999999999
Q ss_pred HHHHHHHhhcCCcccccCCchHHHHHHHHhhccCCeEEeccCChhHHHHHHHHHHcCCcEEEeec-cccCCcchhhhhhh
Q psy568 1427 TENAIMLRRFNRYPLIIDPSGQATEFILKEFESRKITKTSFLDDAFRKNLESALRFGNPLLVQDV-ENYDTILNPVLNRE 1505 (1614)
Q Consensus 1427 ~eNaii~~~~~r~PLliDPq~qa~~wlk~~~~~~~~~v~s~~~~~~~~~le~ai~~G~~lli~dv-e~~dp~l~~vl~~~ 1505 (1614)
+||++++.++.|||++||||+|+..||+++++.++..++++++..|++.+|+|+++|.|++++|+ +.+||.|+|++.+.
T Consensus 1093 ~en~~i~~~~~~~~l~id~q~q~~~~i~~~~~~~~~~~i~~~~~~~l~~le~a~~~g~~il~~~~~e~~d~~l~~ll~~~ 1172 (1395)
T KOG3595|consen 1093 IENGIIITNSNRWPLIIDPQGQANEWIKNKESENKLQVISFNEKEFLRQLENALRFGEPVLIEDVNEELDPALEPLLLKE 1172 (1395)
T ss_pred hhHHHHHhccCCCceeecchhhhhHhHhhhhhhcccceeeccchhHHHHHHhHhccCCceeccchhhhhchhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred hhccCCeEEEEeCCcccccCCCceEEEeeCCCCCCCCcccccceEEEEEeeChhhHHHHHHHHHHHhhCCCHHHHHHHHH
Q psy568 1506 LRRTGGRVLITLGDQDIDISPTFVIFLSTRDPTVEFPPDICSRVTFVNFTVTRSSLQSQCLNRVLKAERPDIDTKRSDLL 1585 (1614)
Q Consensus 1506 ~~~~~~~~~i~ig~~~i~~~~~F~l~l~T~~~~p~~~p~~~~~~tvinf~vt~~gLe~qlL~~vv~~e~p~le~~~~~l~ 1585 (1614)
..+.|+...+++||++++++++|++|++|+++||||.|+++++++++||++|..++++|+|+.++..|+|+++++|..++
T Consensus 1173 ~~~~g~~~~~~~gd~~~~~~~~f~~~~~t~~~~~~~~p~~~~~~~~v~f~~t~~~l~~qll~~v~~~e~~~~~~~~~~l~ 1252 (1395)
T KOG3595|consen 1173 TFKQGGRVLIKLGDKEIDLNPDFRLYITTKLRNPHYLPELSARVTLVNFTVTPSGLEDQLLGSVVAIERPDLEEERSDLI 1252 (1395)
T ss_pred eeeccCeEeeecCceeeecCCCeeEEEeecccCcccChhhhhceeEEEeEechhHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCCC
Q psy568 1586 KLQGEFHLRLRHLEKSLLGALNESKGKLL 1614 (1614)
Q Consensus 1586 ~~~~~~~~~l~~le~~lL~~L~~~~g~il 1614 (1614)
.+.++++.+|+++|+.+|+.|+.|+||+|
T Consensus 1253 ~~~~~~~~~lk~le~~lL~~l~~s~~~~l 1281 (1395)
T KOG3595|consen 1253 KLQAEIKRQLKELEDRLLERLSSSEGNIL 1281 (1395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCccc
Confidence 99999999999999999999999999986
|
|
| >COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PF12781 AAA_9: ATP-binding dynein motor region D5; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A | Back alignment and domain information |
|---|
| >PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A | Back alignment and domain information |
|---|
| >COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0733|consensus | Back alignment and domain information |
|---|
| >TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family | Back alignment and domain information |
|---|
| >PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >KOG1808|consensus | Back alignment and domain information |
|---|
| >TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA | Back alignment and domain information |
|---|
| >TIGR01650 PD_CobS cobaltochelatase, CobS subunit | Back alignment and domain information |
|---|
| >COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN | Back alignment and domain information |
|---|
| >PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A | Back alignment and domain information |
|---|
| >PRK10865 protein disaggregation chaperone; Provisional | Back alignment and domain information |
|---|
| >KOG1808|consensus | Back alignment and domain information |
|---|
| >CHL00095 clpC Clp protease ATP binding subunit | Back alignment and domain information |
|---|
| >KOG0730|consensus | Back alignment and domain information |
|---|
| >TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB | Back alignment and domain information |
|---|
| >PHA02244 ATPase-like protein | Back alignment and domain information |
|---|
| >KOG0736|consensus | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >KOG0735|consensus | Back alignment and domain information |
|---|
| >TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily | Back alignment and domain information |
|---|
| >TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA | Back alignment and domain information |
|---|
| >PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG0714 MoxR-like ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model | Back alignment and domain information |
|---|
| >KOG0735|consensus | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair | Back alignment and domain information |
|---|
| >CHL00095 clpC Clp protease ATP binding subunit | Back alignment and domain information |
|---|
| >PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional | Back alignment and domain information |
|---|
| >TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily | Back alignment and domain information |
|---|
| >COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional | Back alignment and domain information |
|---|
| >KOG0733|consensus | Back alignment and domain information |
|---|
| >KOG0730|consensus | Back alignment and domain information |
|---|
| >KOG1051|consensus | Back alignment and domain information |
|---|
| >COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00763 lon ATP-dependent protease La | Back alignment and domain information |
|---|
| >COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF01078 Mg_chelatase: Magnesium chelatase, subunit ChlI; InterPro: IPR000523 Magnesium-chelatase is a three-component enzyme that catalyses the insertion of Mg2+ into protoporphyrin IX | Back alignment and domain information |
|---|
| >KOG0741|consensus | Back alignment and domain information |
|---|
| >PHA02244 ATPase-like protein | Back alignment and domain information |
|---|
| >TIGR01650 PD_CobS cobaltochelatase, CobS subunit | Back alignment and domain information |
|---|
| >CHL00195 ycf46 Ycf46; Provisional | Back alignment and domain information |
|---|
| >KOG0734|consensus | Back alignment and domain information |
|---|
| >KOG0727|consensus | Back alignment and domain information |
|---|
| >KOG0738|consensus | Back alignment and domain information |
|---|
| >TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN | Back alignment and domain information |
|---|
| >PRK10787 DNA-binding ATP-dependent protease La; Provisional | Back alignment and domain information |
|---|
| >TIGR03689 pup_AAA proteasome ATPase | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional | Back alignment and domain information |
|---|
| >COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >CHL00206 ycf2 Ycf2; Provisional | Back alignment and domain information |
|---|
| >CHL00176 ftsH cell division protein; Validated | Back alignment and domain information |
|---|
| >CHL00181 cbbX CbbX; Provisional | Back alignment and domain information |
|---|
| >KOG0736|consensus | Back alignment and domain information |
|---|
| >PRK03992 proteasome-activating nucleotidase; Provisional | Back alignment and domain information |
|---|
| >COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG2028|consensus | Back alignment and domain information |
|---|
| >COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH | Back alignment and domain information |
|---|
| >PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed | Back alignment and domain information |
|---|
| >KOG0731|consensus | Back alignment and domain information |
|---|
| >PRK13407 bchI magnesium chelatase subunit I; Provisional | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family | Back alignment and domain information |
|---|
| >TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB | Back alignment and domain information |
|---|
| >KOG2004|consensus | Back alignment and domain information |
|---|
| >PRK13531 regulatory ATPase RavA; Provisional | Back alignment and domain information |
|---|
| >KOG0652|consensus | Back alignment and domain information |
|---|
| >KOG0739|consensus | Back alignment and domain information |
|---|
| >TIGR01242 26Sp45 26S proteasome subunit P45 family | Back alignment and domain information |
|---|
| >KOG0737|consensus | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit | Back alignment and domain information |
|---|
| >COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >KOG0740|consensus | Back alignment and domain information |
|---|
| >PRK10733 hflB ATP-dependent metalloprotease; Reviewed | Back alignment and domain information |
|---|
| >PRK11608 pspF phage shock protein operon transcriptional activator; Provisional | Back alignment and domain information |
|---|
| >PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed | Back alignment and domain information |
|---|
| >PRK09862 putative ATP-dependent protease; Provisional | Back alignment and domain information |
|---|
| >TIGR02974 phageshock_pspF psp operon transcriptional activator PspF | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >CHL00195 ycf46 Ycf46; Provisional | Back alignment and domain information |
|---|
| >KOG0726|consensus | Back alignment and domain information |
|---|
| >KOG0742|consensus | Back alignment and domain information |
|---|
| >PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional | Back alignment and domain information |
|---|
| >TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR | Back alignment and domain information |
|---|
| >TIGR01817 nifA Nif-specific regulatory protein | Back alignment and domain information |
|---|
| >smart00350 MCM minichromosome maintenance proteins | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00368 Mg chelatase-related protein | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0744|consensus | Back alignment and domain information |
|---|
| >PRK07003 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional | Back alignment and domain information |
|---|
| >COG1221 PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK14960 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG0743|consensus | Back alignment and domain information |
|---|
| >PRK10865 protein disaggregation chaperone; Provisional | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) | Back alignment and domain information |
|---|
| >KOG0728|consensus | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PRK08691 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK11388 DNA-binding transcriptional regulator DhaR; Provisional | Back alignment and domain information |
|---|
| >COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK12323 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >KOG0991|consensus | Back alignment and domain information |
|---|
| >PRK10923 glnG nitrogen regulation protein NR(I); Provisional | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG0996|consensus | Back alignment and domain information |
|---|
| >PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >KOG0729|consensus | Back alignment and domain information |
|---|
| >PRK14949 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR02031 BchD-ChlD magnesium chelatase ATPase subunit D | Back alignment and domain information |
|---|
| >CHL00081 chlI Mg-protoporyphyrin IX chelatase | Back alignment and domain information |
|---|
| >KOG0250|consensus | Back alignment and domain information |
|---|
| >PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK07994 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >TIGR02030 BchI-ChlI magnesium chelatase ATPase subunit I | Back alignment and domain information |
|---|
| >PRK10820 DNA-binding transcriptional regulator TyrR; Provisional | Back alignment and domain information |
|---|
| >PRK14951 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >KOG0732|consensus | Back alignment and domain information |
|---|
| >COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >TIGR02442 Cob-chelat-sub cobaltochelatase subunit | Back alignment and domain information |
|---|
| >PTZ00111 DNA replication licensing factor MCM4; Provisional | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK12422 chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0989|consensus | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau | Back alignment and domain information |
|---|
| >KOG1969|consensus | Back alignment and domain information |
|---|
| >TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator | Back alignment and domain information |
|---|
| >PRK14963 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00678 holB DNA polymerase III, delta' subunit | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF13173 AAA_14: AAA domain | Back alignment and domain information |
|---|
| >PRK14952 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK05563 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG0651|consensus | Back alignment and domain information |
|---|
| >PF00493 MCM: MCM2/3/5 family This family extends the MCM domain of Prosite | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08451 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK07764 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK07133 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG1051|consensus | Back alignment and domain information |
|---|
| >PRK15115 response regulator GlrR; Provisional | Back alignment and domain information |
|---|
| >PRK07940 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK14954 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14970 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14953 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14948 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins | Back alignment and domain information |
|---|
| >PRK14965 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >TIGR00764 lon_rel lon-related putative ATP-dependent protease | Back alignment and domain information |
|---|
| >PRK06305 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >TIGR01818 ntrC nitrogen regulation protein NR(I) | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK06647 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG0979|consensus | Back alignment and domain information |
|---|
| >PRK14971 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] | Back alignment and domain information |
|---|
| >PRK07003 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PRK13406 bchD magnesium chelatase subunit D; Provisional | Back alignment and domain information |
|---|
| >PRK04132 replication factor C small subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0480|consensus | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >smart00763 AAA_PrkA PrkA AAA domain | Back alignment and domain information |
|---|
| >PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >KOG0478|consensus | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
|---|
| >PRK10365 transcriptional regulatory protein ZraR; Provisional | Back alignment and domain information |
|---|
| >PRK14960 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional | Back alignment and domain information |
|---|
| >COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >KOG1969|consensus | Back alignment and domain information |
|---|
| >TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK08181 transposase; Validated | Back alignment and domain information |
|---|
| >KOG1514|consensus | Back alignment and domain information |
|---|
| >PRK12323 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK14963 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >CHL00181 cbbX CbbX; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PRK07471 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A | Back alignment and domain information |
|---|
| >PRK14949 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK07994 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >TIGR00602 rad24 checkpoint protein rad24 | Back alignment and domain information |
|---|
| >COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13765 ATP-dependent protease Lon; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >TIGR00763 lon ATP-dependent protease La | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF13177 DNA_pol3_delta2: DNA polymerase III, delta subunit; PDB: 1NJF_B 3GLG_G 1XXH_I 1NJG_A 3GLF_B 3GLI_G 1IQP_E 2GNO_A 1SXJ_E 1A5T_A | Back alignment and domain information |
|---|
| >PRK07764 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK08058 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK05707 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0933|consensus | Back alignment and domain information |
|---|
| >KOG0976|consensus | Back alignment and domain information |
|---|
| >KOG2227|consensus | Back alignment and domain information |
|---|
| >PRK10787 DNA-binding ATP-dependent protease La; Provisional | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit | Back alignment and domain information |
|---|
| >PRK14953 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG0995|consensus | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
|---|
| >PF07693 KAP_NTPase: KAP family P-loop domain; InterPro: IPR011646 The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals | Back alignment and domain information |
|---|
| >PRK14951 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK08691 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG0731|consensus | Back alignment and domain information |
|---|
| >KOG0482|consensus | Back alignment and domain information |
|---|
| >KOG0933|consensus | Back alignment and domain information |
|---|
| >KOG2028|consensus | Back alignment and domain information |
|---|
| >KOG0745|consensus | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK03992 proteasome-activating nucleotidase; Provisional | Back alignment and domain information |
|---|
| >PRK08699 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed | Back alignment and domain information |
|---|
| >KOG2035|consensus | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >KOG0734|consensus | Back alignment and domain information |
|---|
| >PF13177 DNA_pol3_delta2: DNA polymerase III, delta subunit; PDB: 1NJF_B 3GLG_G 1XXH_I 1NJG_A 3GLF_B 3GLI_G 1IQP_E 2GNO_A 1SXJ_E 1A5T_A | Back alignment and domain information |
|---|
| >TIGR01242 26Sp45 26S proteasome subunit P45 family | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK14952 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK14954 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >TIGR00678 holB DNA polymerase III, delta' subunit | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK05564 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP | Back alignment and domain information |
|---|
| >PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF03969 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 ATPase family gene 1 (AFG1) ATPase is a 377 amino acid putative protein with an ATPase motif typical of the protein family including SEC18p PAS1, CDC48-VCP and TBP | Back alignment and domain information |
|---|
| >COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14965 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) | Back alignment and domain information |
|---|
| >PRK07133 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK05707 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0477|consensus | Back alignment and domain information |
|---|
| >TIGR02030 BchI-ChlI magnesium chelatase ATPase subunit I | Back alignment and domain information |
|---|
| >CHL00176 ftsH cell division protein; Validated | Back alignment and domain information |
|---|
| >PRK08769 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >KOG0738|consensus | Back alignment and domain information |
|---|
| >PRK09183 transposase/IS protein; Provisional | Back alignment and domain information |
|---|
| >PRK06305 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0990|consensus | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PF14516 AAA_35: AAA-like domain | Back alignment and domain information |
|---|
| >PRK06964 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >KOG0250|consensus | Back alignment and domain information |
|---|
| >COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08451 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >PRK14948 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG0161|consensus | Back alignment and domain information |
|---|
| >PRK07940 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK06964 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK05564 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK06871 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK07399 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK13531 regulatory ATPase RavA; Provisional | Back alignment and domain information |
|---|
| >PRK06871 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK06647 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02688 conserved hypothetical protein TIGR02688 | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG0714 MoxR-like ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08769 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2680|consensus | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK05563 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase | Back alignment and domain information |
|---|
| >KOG2004|consensus | Back alignment and domain information |
|---|
| >TIGR00602 rad24 checkpoint protein rad24 | Back alignment and domain information |
|---|
| >PRK07399 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif | Back alignment and domain information |
|---|
| >PHA02774 E1; Provisional | Back alignment and domain information |
|---|
| >PRK06090 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK07471 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >KOG2543|consensus | Back alignment and domain information |
|---|
| >COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK12422 chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK13407 bchI magnesium chelatase subunit I; Provisional | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A | Back alignment and domain information |
|---|
| >KOG0729|consensus | Back alignment and domain information |
|---|
| >PF00931 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is the NB-ARC domain, a novel signalling motif found in bacteria and eukaryotes, shared by plant resistance gene products and regulators of cell death in animals [] | Back alignment and domain information |
|---|
| >COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >KOG2228|consensus | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK05917 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK13808 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins | Back alignment and domain information |
|---|
| >PRK06921 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1970|consensus | Back alignment and domain information |
|---|
| >PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >KOG0976|consensus | Back alignment and domain information |
|---|
| >PRK10536 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK14971 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >CHL00206 ycf2 Ycf2; Provisional | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >KOG0161|consensus | Back alignment and domain information |
|---|
| >PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP | Back alignment and domain information |
|---|
| >PF01078 Mg_chelatase: Magnesium chelatase, subunit ChlI; InterPro: IPR000523 Magnesium-chelatase is a three-component enzyme that catalyses the insertion of Mg2+ into protoporphyrin IX | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >TIGR03689 pup_AAA proteasome ATPase | Back alignment and domain information |
|---|
| >PRK14970 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK06090 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >KOG0743|consensus | Back alignment and domain information |
|---|
| >TIGR01069 mutS2 MutS2 family protein | Back alignment and domain information |
|---|
| >PRK07993 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >KOG1029|consensus | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK10733 hflB ATP-dependent metalloprotease; Reviewed | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >KOG0739|consensus | Back alignment and domain information |
|---|
| >TIGR00041 DTMP_kinase thymidylate kinase | Back alignment and domain information |
|---|
| >CHL00081 chlI Mg-protoporyphyrin IX chelatase | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF13173 AAA_14: AAA domain | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function | Back alignment and domain information |
|---|
| >PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional | Back alignment and domain information |
|---|
| >KOG0980|consensus | Back alignment and domain information |
|---|
| >COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0978|consensus | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK07993 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR00767 rho transcription termination factor Rho | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK09376 rho transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit | Back alignment and domain information |
|---|
| >KOG0727|consensus | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK13948 shikimate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK07132 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08939 primosomal protein DnaI; Reviewed | Back alignment and domain information |
|---|
| >KOG3595|consensus | Back alignment and domain information |
|---|
| >KOG3347|consensus | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins | Back alignment and domain information |
|---|
| >COG3911 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08699 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR00368 Mg chelatase-related protein | Back alignment and domain information |
|---|
| >KOG0989|consensus | Back alignment and domain information |
|---|
| >PRK08181 transposase; Validated | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK05818 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0652|consensus | Back alignment and domain information |
|---|
| >PRK12608 transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0991|consensus | Back alignment and domain information |
|---|
| >KOG0977|consensus | Back alignment and domain information |
|---|
| >KOG0741|consensus | Back alignment and domain information |
|---|
| >COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0651|consensus | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >KOG1970|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1614 | ||||
| 3vkh_A | 3367 | X-Ray Structure Of A Functional Full-Length Dynein | 0.0 | ||
| 3vkg_A | 3245 | X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn | 0.0 | ||
| 3vkg_A | 3245 | X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn | 1e-125 | ||
| 4ai6_A | 2695 | Dynein Motor Domain - Adp Complex Length = 2695 | 0.0 | ||
| 4ai6_A | 2695 | Dynein Motor Domain - Adp Complex Length = 2695 | 5e-44 | ||
| 3qmz_A | 2486 | Crystal Structure Of The Cytoplasmic Dynein Heavy C | 0.0 | ||
| 3qmz_A | 2486 | Crystal Structure Of The Cytoplasmic Dynein Heavy C | 2e-44 | ||
| 3j1t_A | 164 | High Affinity Dynein Microtubule Binding Domain - T | 1e-58 | ||
| 3err_A | 536 | Microtubule Binding Domain From Mouse Cytoplasmic D | 6e-57 | ||
| 2rr7_A | 155 | Microtubule Binding Domain Of Dynein-C Length = 155 | 4e-11 |
| >pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor Domain Length = 3367 | Back alignment and structure |
|
| >pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245 | Back alignment and structure |
| >pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245 | Back alignment and structure |
| >pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695 | Back alignment and structure |
| >pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695 | Back alignment and structure |
| >pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486 | Back alignment and structure |
| >pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486 | Back alignment and structure |
| >pdb|3J1T|A Chain A, High Affinity Dynein Microtubule Binding Domain - Tubulin Complex Length = 164 | Back alignment and structure |
| >pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase Length = 536 | Back alignment and structure |
| >pdb|2RR7|A Chain A, Microtubule Binding Domain Of Dynein-C Length = 155 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
Score = 1273 bits (3295), Expect = 0.0
Identities = 674/1220 (55%), Positives = 894/1220 (73%), Gaps = 44/1220 (3%)
Query: 4 LKEKIKEVCREEFLVCGEGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAWKVL 63
L++KI+E+ ++ LV + W+EK+LQL+QI N+NHG+MMVGPSG GK+T+W+V
Sbjct: 873 LRKKIQEIAKQRHLVTKQ------EWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVY 926
Query: 64 LKALERYEGVEGVAHIIDPKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGEISK 123
L+A+E+ + ++ AH++DPKAI+K+ L+G LD TREWTDGLFT LRRIIDNVRGE +K
Sbjct: 927 LEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTK 986
Query: 124 RQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNIRIMFEVQDLKYATLATVS 183
R WIIFDGDVDPEWVENLNS+LDDNKLLTLPNGERL+LP N+R+MFEVQDLKYATLAT+S
Sbjct: 987 RHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATIS 1046
Query: 184 RCGMIWFSEDVLSTEMIFENYLSRLRNIALDDIDDD-------------------SSLLI 224
RCGM+WFSE++L+T+MIF+NYL L N D + + S +L
Sbjct: 1047 RCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENAQLQQQQQTTITSPILT 1106
Query: 225 TVDATGKA------PDDVLSPALTLQQDVASILSTHFAPDGLVVRALDYAMQQEHIMDFT 278
+ T + ++ L +Q++ A+I+S +F P GLV + L+ A Q+ HIMDFT
Sbjct: 1107 SPPTTSSSSRSTTSTTSMIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFT 1166
Query: 279 RLRALGSLFSMLNQGVRNVLQYNHSHSDFPLSQDVVERYIPRILVYSLLWSFAGDGKLKM 338
RLR L S FS++N+ + NV++YN HSDFP+S + YI L+YSL+W G L
Sbjct: 1167 RLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVE 1226
Query: 339 RSDFGNFLRSVTTITLPATSSDIVDFEVNIKNGEWVPWSNKVPQIEVETQKVAASDVVVP 398
R +F F++++ +PA + ++D+ V+I + W W NKVP +EVET KVA+ DVV+P
Sbjct: 1227 RENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVPSVEVETHKVASPDVVIP 1286
Query: 399 TLDTVRHESLLYTWLAEHKPLVLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTPEL 458
T+DT RH +L+ WL+EH+PL+LCGPPGSGKTMTL S LRA PD EVVSLNFSSATTPEL
Sbjct: 1287 TVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPEL 1346
Query: 459 LLKTFDHYCEYRKTPNG-VILSPIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQ 517
LLKTFDH+CEY++TP+G +L P QLGKWLV+FCDEINLP DKY TQRVI+F+RQ++E+
Sbjct: 1347 LLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEK 1406
Query: 518 RGFYRPADKQWVSLERIQCVGACNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYG 577
GF+R +D W+ L++IQ VGACNPPTD GR L+HRFLRH P++ VD+P +SL QIYG
Sbjct: 1407 GGFWRTSDHTWIKLDKIQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYG 1466
Query: 578 TFSRAMLRLIPPLRGYADALTNAMVELYLASQEKFTQDMQPHYVYSPREMTRWVRGICEA 637
TF+RA+++L+P LR +AD LT+AMVE Y SQ++FT D+Q HY+YSPRE++RW R + EA
Sbjct: 1467 TFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEA 1526
Query: 638 IRPLESLTVEGLVRLWAHEALRLFQDRLVNDVERQWTNENIDAVAMKYFSNIDKEVLARP 697
I+ ++ T+EGLVRLWAHEALRLFQDRLV E++WT++ ID VA+K+F +++ + L RP
Sbjct: 1527 IQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRP 1586
Query: 698 ILYSNWLSKNYVPVGTTELREYVQARLKVFYEEELDVQLVLFDEVLDHVLRIDRIFRQPQ 757
ILYSNWL+K+Y PV ++LREYV+ARLKVFYEEELDV LVLF+EVLDH+LRIDR+FRQPQ
Sbjct: 1587 ILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQ 1646
Query: 758 GHLLLIGVSGAGKTTLSRFVAFMNGLSVFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKI 817
GH LLIGVSG GK+ LSRFVA+MNGLS++ I+ +N Y +DFD+DLR +L+R+GCK EKI
Sbjct: 1647 GHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKI 1706
Query: 818 AFLLDESNVLESGFLERMNTLLANGEIPGLFEGDEYTTLMTQCKEGAQREGLMLDSNEEL 877
F+ DESNVLES FLERMNTLLA GE+PGLFEG+E+T LM CKE AQR GL+LDS EEL
Sbjct: 1707 CFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGLILDSEEEL 1766
Query: 878 YKWFTQQVMKNLHVVFTMNPSSEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFT 937
YK+FT QV +NLHVVFTMNP+S +R+ATSPALFNRCVL+WFG+WS AL+QV EFT
Sbjct: 1767 YKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSEFT 1826
Query: 938 SKIDLDGPQNWKAPDFFPSVCSLV-----STTPSHRDSVINACVYVHQTLHKANARLSKR 992
+DL+ P + AP F ++ + PSHRD+V+++ VY+HQT+ +AN RL KR
Sbjct: 1827 RNLDLENP-QYIAPPVFIQEAEIMGNNLMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKR 1885
Query: 993 GSRTMAITPRHYLDFINHFVKLYREKCSELEEQQLHLNVGLGKIAETVEQVEEMQKSLAV 1052
R +TPRHYLDFIN V L EK +LEE+QLHLN+GL K+ +T QV+++Q SLA
Sbjct: 1886 QGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQ 1945
Query: 1053 KSQELQSKNEAANLKLKEMIKDQQEAEKRKVQSQDIQAEIEKQTVEIAQKRVFVMEDLAQ 1112
K++EL KNE AN KLK+M++DQQ AE ++ ++++Q +++ + EIA ++V DL +
Sbjct: 1946 KNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEK 2005
Query: 1113 VEP------AVMDAQQAVKEIKKQQLVELRSMANPPSVVKLALESICLLLGENATDWKAI 1166
EP V + A E+K +Q + ++ + E L+ E
Sbjct: 2006 AEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTES 2065
Query: 1167 RAVVMRENFINSIVSNFNTE 1186
V + + +++ N N+E
Sbjct: 2066 SKVKNKVDRSIALLDNLNSE 2085
|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 | Back alignment and structure |
|---|
| >4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 | Back alignment and structure |
|---|
| >2rr7_A Dynein heavy chain 9; microtubule-binding, stalk head, MTBD, antiparallel coil, motor protein, DSH; NMR {Chlamydomonas reinhardtii} Length = 155 | Back alignment and structure |
|---|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} Length = 536 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 Length = 602 | Back alignment and structure |
|---|
| >1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Length = 350 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1614 | |||
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 100.0 | |
| 4akg_A | 2695 | Glutathione S-transferase class-MU 26 kDa isozyme | 100.0 | |
| 2rr7_A | 155 | Dynein heavy chain 9; microtubule-binding, stalk h | 99.98 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 99.97 | |
| 4akg_A | 2695 | Glutathione S-transferase class-MU 26 kDa isozyme | 99.95 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 99.95 | |
| 1r6b_X | 758 | CLPA protein; AAA+, N-terminal domain, CLPS, cryst | 99.74 | |
| 1qvr_A | 854 | CLPB protein; coiled coil, AAA ATPase, chaperone; | 99.72 | |
| 3pxi_A | 758 | Negative regulator of genetic competence CLPC/MEC; | 99.71 | |
| 3pxi_A | 758 | Negative regulator of genetic competence CLPC/MEC; | 99.6 | |
| 1r6b_X | 758 | CLPA protein; AAA+, N-terminal domain, CLPS, cryst | 99.58 | |
| 3cf2_A | 806 | TER ATPase, transitional endoplasmic reticulum ATP | 99.56 | |
| 1qvr_A | 854 | CLPB protein; coiled coil, AAA ATPase, chaperone; | 99.41 | |
| 3cf2_A | 806 | TER ATPase, transitional endoplasmic reticulum ATP | 99.3 | |
| 2r44_A | 331 | Uncharacterized protein; putative ATPase, structur | 99.28 | |
| 1ypw_A | 806 | Transitional endoplasmic reticulum ATPase; AAA, P9 | 99.27 | |
| 4b4t_J | 405 | 26S protease regulatory subunit 8 homolog; hydrola | 99.16 | |
| 4b4t_I | 437 | 26S protease regulatory subunit 4 homolog; hydrola | 99.13 | |
| 4fcw_A | 311 | Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 | 99.11 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 99.09 | |
| 4b4t_M | 434 | 26S protease regulatory subunit 6A; hydrolase, AAA | 99.08 | |
| 4b4t_L | 437 | 26S protease subunit RPT4; hydrolase, AAA-atpases, | 99.05 | |
| 4b4t_H | 467 | 26S protease regulatory subunit 7 homolog; hydrola | 99.04 | |
| 4b4t_K | 428 | 26S protease regulatory subunit 6B homolog; hydrol | 99.0 | |
| 3m6a_A | 543 | ATP-dependent protease LA 1; alpha, beta, ATP-bind | 99.0 | |
| 3pfi_A | 338 | Holliday junction ATP-dependent DNA helicase RUVB; | 98.99 | |
| 3t15_A | 293 | Ribulose bisphosphate carboxylase/oxygenase activ | 98.98 | |
| 1xwi_A | 322 | SKD1 protein; VPS4B, AAA ATPase, protein transport | 98.97 | |
| 1ojl_A | 304 | Transcriptional regulatory protein ZRAR; response | 98.96 | |
| 2chg_A | 226 | Replication factor C small subunit; DNA-binding pr | 98.96 | |
| 2zan_A | 444 | Vacuolar protein sorting-associating protein 4B; S | 98.93 | |
| 3nbx_X | 500 | ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu | 98.93 | |
| 1ofh_A | 310 | ATP-dependent HSL protease ATP-binding subunit HSL | 98.92 | |
| 2qp9_X | 355 | Vacuolar protein sorting-associated protein 4; ATP | 98.92 | |
| 3f9v_A | 595 | Minichromosome maintenance protein MCM; replicativ | 98.91 | |
| 1hqc_A | 324 | RUVB; extended AAA-ATPase domain, complex with nuc | 98.89 | |
| 3eie_A | 322 | Vacuolar protein sorting-associated protein 4; AAA | 98.86 | |
| 3u61_B | 324 | DNA polymerase accessory protein 44; AAA+, ATP hyd | 98.85 | |
| 3pvs_A | 447 | Replication-associated recombination protein A; ma | 98.83 | |
| 3cf0_A | 301 | Transitional endoplasmic reticulum ATPase; AAA, P9 | 98.8 | |
| 3h4m_A | 285 | Proteasome-activating nucleotidase; ATPase, PAN, A | 98.8 | |
| 3te6_A | 318 | Regulatory protein SIR3; heterochromatin, gene sil | 98.78 | |
| 1jbk_A | 195 | CLPB protein; beta barrel, chaperone; 1.80A {Esche | 98.76 | |
| 3hws_A | 363 | ATP-dependent CLP protease ATP-binding subunit CL; | 98.75 | |
| 3pxg_A | 468 | Negative regulator of genetic competence CLPC/MEC; | 98.73 | |
| 1g8p_A | 350 | Magnesium-chelatase 38 kDa subunit; parallel beta | 98.72 | |
| 2qz4_A | 262 | Paraplegin; AAA+, SPG7, protease, ADP, structural | 98.71 | |
| 3syl_A | 309 | Protein CBBX; photosynthesis, rubisco activase, AA | 98.71 | |
| 3vfd_A | 389 | Spastin; ATPase, microtubule severing, hydrolase; | 98.66 | |
| 3hu3_A | 489 | Transitional endoplasmic reticulum ATPase; VCP, tr | 98.65 | |
| 2ce7_A | 476 | Cell division protein FTSH; metalloprotease; HET: | 98.65 | |
| 3d8b_A | 357 | Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s | 98.65 | |
| 1njg_A | 250 | DNA polymerase III subunit gamma; rossman-like fol | 98.64 | |
| 1sxj_A | 516 | Activator 1 95 kDa subunit; clamp loader, processi | 98.64 | |
| 1lv7_A | 257 | FTSH; alpha/beta domain, four helix bundle, hydrol | 98.63 | |
| 2p65_A | 187 | Hypothetical protein PF08_0063; CLPB, malaria, str | 98.61 | |
| 1um8_A | 376 | ATP-dependent CLP protease ATP-binding subunit CL; | 98.6 | |
| 2chq_A | 319 | Replication factor C small subunit; DNA-binding pr | 98.58 | |
| 3uk6_A | 368 | RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding | 98.57 | |
| 3b9p_A | 297 | CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc | 98.55 | |
| 3bos_A | 242 | Putative DNA replication factor; P-loop containing | 98.55 | |
| 3co5_A | 143 | Putative two-component system transcriptional RES | 98.55 | |
| 1iqp_A | 327 | RFCS; clamp loader, extended AAA-ATPase domain, co | 98.55 | |
| 2v1u_A | 387 | Cell division control protein 6 homolog; DNA repli | 98.55 | |
| 1l8q_A | 324 | Chromosomal replication initiator protein DNAA; AA | 98.53 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 98.49 | |
| 3n70_A | 145 | Transport activator; sigma-54, ntpase, PSI, MCSG, | 98.48 | |
| 2qby_B | 384 | CDC6 homolog 3, cell division control protein 6 ho | 98.48 | |
| 1sxj_B | 323 | Activator 1 37 kDa subunit; clamp loader, processi | 98.48 | |
| 1sxj_D | 353 | Activator 1 41 kDa subunit; clamp loader, processi | 98.45 | |
| 2x8a_A | 274 | Nuclear valosin-containing protein-like; nuclear p | 98.43 | |
| 1in4_A | 334 | RUVB, holliday junction DNA helicase RUVB; AAA+-cl | 98.37 | |
| 2dhr_A | 499 | FTSH; AAA+ protein, hexameric Zn metalloprotease, | 98.36 | |
| 1d2n_A | 272 | N-ethylmaleimide-sensitive fusion protein; hexamer | 98.34 | |
| 1fnn_A | 389 | CDC6P, cell division control protein 6; ORC1, AAA | 98.32 | |
| 1sxj_C | 340 | Activator 1 40 kDa subunit; clamp loader, processi | 98.3 | |
| 1ny5_A | 387 | Transcriptional regulator (NTRC family); AAA+ ATPa | 98.3 | |
| 2z4s_A | 440 | Chromosomal replication initiator protein DNAA; AA | 98.28 | |
| 2qby_A | 386 | CDC6 homolog 1, cell division control protein 6 ho | 98.26 | |
| 1jr3_A | 373 | DNA polymerase III subunit gamma; processivity, pr | 98.25 | |
| 1a5t_A | 334 | Delta prime, HOLB; zinc finger, DNA replication; 2 | 98.21 | |
| 3k1j_A | 604 | LON protease, ATP-dependent protease LON; ATP-bind | 98.2 | |
| 3f8t_A | 506 | Predicted ATPase involved in replication control, | 98.19 | |
| 1ixz_A | 254 | ATP-dependent metalloprotease FTSH; AAA domain fol | 98.19 | |
| 3pxg_A | 468 | Negative regulator of genetic competence CLPC/MEC; | 98.15 | |
| 3syl_A | 309 | Protein CBBX; photosynthesis, rubisco activase, AA | 98.14 | |
| 1ypw_A | 806 | Transitional endoplasmic reticulum ATPase; AAA, P9 | 98.14 | |
| 1iy2_A | 278 | ATP-dependent metalloprotease FTSH; AAA domain fol | 98.12 | |
| 2gno_A | 305 | DNA polymerase III, gamma subunit-related protein; | 98.12 | |
| 3dzd_A | 368 | Transcriptional regulator (NTRC family); sigma43 a | 98.11 | |
| 1jbk_A | 195 | CLPB protein; beta barrel, chaperone; 1.80A {Esche | 98.03 | |
| 1sxj_E | 354 | Activator 1 40 kDa subunit; clamp loader, processi | 97.99 | |
| 1g41_A | 444 | Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep | 97.98 | |
| 4fcw_A | 311 | Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 | 97.86 | |
| 2chg_A | 226 | Replication factor C small subunit; DNA-binding pr | 97.84 | |
| 3pvs_A | 447 | Replication-associated recombination protein A; ma | 97.83 | |
| 3u61_B | 324 | DNA polymerase accessory protein 44; AAA+, ATP hyd | 97.79 | |
| 3pfi_A | 338 | Holliday junction ATP-dependent DNA helicase RUVB; | 97.76 | |
| 2c9o_A | 456 | RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- | 97.74 | |
| 3uk6_A | 368 | RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding | 97.68 | |
| 1g8p_A | 350 | Magnesium-chelatase 38 kDa subunit; parallel beta | 97.66 | |
| 2qz4_A | 262 | Paraplegin; AAA+, SPG7, protease, ADP, structural | 97.59 | |
| 4b4t_J | 405 | 26S protease regulatory subunit 8 homolog; hydrola | 97.58 | |
| 2p65_A | 187 | Hypothetical protein PF08_0063; CLPB, malaria, str | 97.55 | |
| 3vfd_A | 389 | Spastin; ATPase, microtubule severing, hydrolase; | 97.53 | |
| 4b4t_K | 428 | 26S protease regulatory subunit 6B homolog; hydrol | 97.53 | |
| 1w5s_A | 412 | Origin recognition complex subunit 2 ORC2; replica | 97.51 | |
| 4b4t_L | 437 | 26S protease subunit RPT4; hydrolase, AAA-atpases, | 97.47 | |
| 4b4t_H | 467 | 26S protease regulatory subunit 7 homolog; hydrola | 97.43 | |
| 1njg_A | 250 | DNA polymerase III subunit gamma; rossman-like fol | 97.42 | |
| 1um8_A | 376 | ATP-dependent CLP protease ATP-binding subunit CL; | 97.39 | |
| 1tue_A | 212 | Replication protein E1; helicase, replication, E1E | 97.38 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 97.37 | |
| 2v1u_A | 387 | Cell division control protein 6 homolog; DNA repli | 97.37 | |
| 3hws_A | 363 | ATP-dependent CLP protease ATP-binding subunit CL; | 97.36 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 97.36 | |
| 4b4t_M | 434 | 26S protease regulatory subunit 6A; hydrolase, AAA | 97.36 | |
| 1d2n_A | 272 | N-ethylmaleimide-sensitive fusion protein; hexamer | 97.36 | |
| 4b4t_I | 437 | 26S protease regulatory subunit 4 homolog; hydrola | 97.33 | |
| 3h4m_A | 285 | Proteasome-activating nucleotidase; ATPase, PAN, A | 97.33 | |
| 3d8b_A | 357 | Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s | 97.33 | |
| 2chq_A | 319 | Replication factor C small subunit; DNA-binding pr | 97.31 | |
| 1iqp_A | 327 | RFCS; clamp loader, extended AAA-ATPase domain, co | 97.3 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 97.3 | |
| 1sxj_D | 353 | Activator 1 41 kDa subunit; clamp loader, processi | 97.3 | |
| 1hqc_A | 324 | RUVB; extended AAA-ATPase domain, complex with nuc | 97.27 | |
| 1ofh_A | 310 | ATP-dependent HSL protease ATP-binding subunit HSL | 97.25 | |
| 1xwi_A | 322 | SKD1 protein; VPS4B, AAA ATPase, protein transport | 97.24 | |
| 2r44_A | 331 | Uncharacterized protein; putative ATPase, structur | 97.23 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 97.23 | |
| 3n70_A | 145 | Transport activator; sigma-54, ntpase, PSI, MCSG, | 97.2 | |
| 2kjq_A | 149 | DNAA-related protein; solution structure, NESG, st | 97.2 | |
| 1sxj_A | 516 | Activator 1 95 kDa subunit; clamp loader, processi | 97.18 | |
| 1sxj_B | 323 | Activator 1 37 kDa subunit; clamp loader, processi | 97.18 | |
| 3nbx_X | 500 | ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu | 97.14 | |
| 3t15_A | 293 | Ribulose bisphosphate carboxylase/oxygenase activ | 97.14 | |
| 1u0j_A | 267 | DNA replication protein; AAA+ protein, P-loop atpa | 97.14 | |
| 2qen_A | 350 | Walker-type ATPase; unknown function; HET: ADP; 2. | 97.09 | |
| 1a5t_A | 334 | Delta prime, HOLB; zinc finger, DNA replication; 2 | 97.08 | |
| 2fna_A | 357 | Conserved hypothetical protein; structural genomic | 97.07 | |
| 3b9p_A | 297 | CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc | 97.02 | |
| 3te6_A | 318 | Regulatory protein SIR3; heterochromatin, gene sil | 97.02 | |
| 1sxj_C | 340 | Activator 1 40 kDa subunit; clamp loader, processi | 96.97 | |
| 1l8q_A | 324 | Chromosomal replication initiator protein DNAA; AA | 96.95 | |
| 1fnn_A | 389 | CDC6P, cell division control protein 6; ORC1, AAA | 96.94 | |
| 1lv7_A | 257 | FTSH; alpha/beta domain, four helix bundle, hydrol | 96.91 | |
| 3f9v_A | 595 | Minichromosome maintenance protein MCM; replicativ | 96.91 | |
| 3m6a_A | 543 | ATP-dependent protease LA 1; alpha, beta, ATP-bind | 96.88 | |
| 3eie_A | 322 | Vacuolar protein sorting-associated protein 4; AAA | 96.87 | |
| 1jr3_A | 373 | DNA polymerase III subunit gamma; processivity, pr | 96.86 | |
| 3bos_A | 242 | Putative DNA replication factor; P-loop containing | 96.83 | |
| 2zan_A | 444 | Vacuolar protein sorting-associating protein 4B; S | 96.82 | |
| 2ce7_A | 476 | Cell division protein FTSH; metalloprotease; HET: | 96.77 | |
| 1sxj_E | 354 | Activator 1 40 kDa subunit; clamp loader, processi | 96.68 | |
| 2qby_A | 386 | CDC6 homolog 1, cell division control protein 6 ho | 96.66 | |
| 2z4s_A | 440 | Chromosomal replication initiator protein DNAA; AA | 96.66 | |
| 1ojl_A | 304 | Transcriptional regulatory protein ZRAR; response | 96.65 | |
| 2qp9_X | 355 | Vacuolar protein sorting-associated protein 4; ATP | 96.63 | |
| 3co5_A | 143 | Putative two-component system transcriptional RES | 96.6 | |
| 2c9o_A | 456 | RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- | 96.6 | |
| 3k1j_A | 604 | LON protease, ATP-dependent protease LON; ATP-bind | 96.57 | |
| 3hu3_A | 489 | Transitional endoplasmic reticulum ATPase; VCP, tr | 96.53 | |
| 3cf0_A | 301 | Transitional endoplasmic reticulum ATPase; AAA, P9 | 96.47 | |
| 2dhr_A | 499 | FTSH; AAA+ protein, hexameric Zn metalloprotease, | 96.46 | |
| 2x8a_A | 274 | Nuclear valosin-containing protein-like; nuclear p | 96.39 | |
| 1tue_A | 212 | Replication protein E1; helicase, replication, E1E | 96.32 | |
| 2vhj_A | 331 | Ntpase P4, P4; non- hydrolysable ATP analogue, hyd | 96.27 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 96.26 | |
| 3jvv_A | 356 | Twitching mobility protein; hexameric P-loop ATPas | 96.26 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 96.22 | |
| 2gno_A | 305 | DNA polymerase III, gamma subunit-related protein; | 96.12 | |
| 2qby_B | 384 | CDC6 homolog 3, cell division control protein 6 ho | 96.01 | |
| 1ixz_A | 254 | ATP-dependent metalloprotease FTSH; AAA domain fol | 96.01 | |
| 1in4_A | 334 | RUVB, holliday junction DNA helicase RUVB; AAA+-cl | 95.97 | |
| 3a4m_A | 260 | L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m | 95.86 | |
| 2r2a_A | 199 | Uncharacterized protein; zonular occludens toxin, | 95.86 | |
| 2kjq_A | 149 | DNAA-related protein; solution structure, NESG, st | 95.81 | |
| 1iy2_A | 278 | ATP-dependent metalloprotease FTSH; AAA domain fol | 95.8 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 95.59 | |
| 2plr_A | 213 | DTMP kinase, probable thymidylate kinase; TMP-bind | 95.57 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 95.08 | |
| 2orw_A | 184 | Thymidine kinase; TMTK, TP4A, transferase; HET: 4T | 95.05 | |
| 2eyu_A | 261 | Twitching motility protein PILT; pilus retraction | 95.02 | |
| 1ex7_A | 186 | Guanylate kinase; substrate-induced FIT, domain mo | 94.89 | |
| 1g41_A | 444 | Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep | 94.84 | |
| 3hjn_A | 197 | DTMP kinase, thymidylate kinase; ATP-binding, nucl | 94.69 | |
| 3lv8_A | 236 | DTMP kinase, thymidylate kinase; structural genomi | 94.66 | |
| 4hlc_A | 205 | DTMP kinase, thymidylate kinase; TMK, MRSA, pipiri | 94.65 | |
| 4eaq_A | 229 | DTMP kinase, thymidylate kinase; structural genomi | 94.6 | |
| 2efr_A | 155 | General control protein GCN4 and tropomyosin 1 Al; | 94.51 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 94.44 | |
| 1kgd_A | 180 | CASK, peripheral plasma membrane CASK; maguk, guan | 94.34 | |
| 1w5s_A | 412 | Origin recognition complex subunit 2 ORC2; replica | 94.32 | |
| 4tmk_A | 213 | Protein (thymidylate kinase); ATP:DTMP phosphotran | 94.3 | |
| 1lvg_A | 198 | Guanylate kinase, GMP kinase; transferase; HET: AD | 94.27 | |
| 2ewv_A | 372 | Twitching motility protein PILT; pilus retraction | 94.2 | |
| 2z0h_A | 197 | DTMP kinase, thymidylate kinase; ATP-binding, nucl | 94.17 | |
| 1ye8_A | 178 | Protein THEP1, hypothetical UPF0334 kinase-like pr | 94.04 | |
| 3v9p_A | 227 | DTMP kinase, thymidylate kinase; ssgcid, STRU geno | 94.0 | |
| 1kag_A | 173 | SKI, shikimate kinase I; transferase, structural g | 93.98 | |
| 3crm_A | 323 | TRNA delta(2)-isopentenylpyrophosphate transferase | 93.82 | |
| 3upu_A | 459 | ATP-dependent DNA helicase DDA; RECA-like domain, | 93.81 | |
| 2fna_A | 357 | Conserved hypothetical protein; structural genomic | 93.8 | |
| 2b8t_A | 223 | Thymidine kinase; deoxyribonucleoside kinase, zinc | 93.79 | |
| 1s96_A | 219 | Guanylate kinase, GMP kinase; E.coli, dimer, SAD, | 93.78 | |
| 1jr3_D | 343 | DNA polymerase III, delta subunit; processivity, p | 93.78 | |
| 2qen_A | 350 | Walker-type ATPase; unknown function; HET: ADP; 2. | 93.68 | |
| 2fxo_A | 129 | Myosin heavy chain, cardiac muscle beta isoform; c | 93.68 | |
| 3kb2_A | 173 | SPBC2 prophage-derived uncharacterized protein YOR | 93.66 | |
| 3uie_A | 200 | Adenylyl-sulfate kinase 1, chloroplastic; rossmann | 93.61 | |
| 3c8u_A | 208 | Fructokinase; YP_612366.1, putative fructose trans | 93.56 | |
| 2ze6_A | 253 | Isopentenyl transferase; crown GALL tumor, cytokin | 93.55 | |
| 3vaa_A | 199 | Shikimate kinase, SK; structural genomics, center | 93.52 | |
| 1qhx_A | 178 | CPT, protein (chloramphenicol phosphotransferase); | 93.46 | |
| 3a00_A | 186 | Guanylate kinase, GMP kinase; domain movement, dim | 93.37 | |
| 1ye8_A | 178 | Protein THEP1, hypothetical UPF0334 kinase-like pr | 93.36 | |
| 2c95_A | 196 | Adenylate kinase 1; transferase, AP4A, nucleotide | 93.34 | |
| 3trf_A | 185 | Shikimate kinase, SK; amino acid biosynthesis, tra | 93.34 | |
| 3tr0_A | 205 | Guanylate kinase, GMP kinase; purines, pyrimidines | 93.31 | |
| 3foz_A | 316 | TRNA delta(2)-isopentenylpyrophosphate transferas; | 93.31 | |
| 3sop_A | 270 | Neuronal-specific septin-3; hydrolase; HET: GDP; 2 | 93.3 | |
| 4eun_A | 200 | Thermoresistant glucokinase; putative sugar kinase | 93.23 | |
| 1zp6_A | 191 | Hypothetical protein ATU3015; alpha-beta protein., | 93.22 | |
| 3asz_A | 211 | Uridine kinase; cytidine phosphorylation, transfer | 93.21 | |
| 3upu_A | 459 | ATP-dependent DNA helicase DDA; RECA-like domain, | 93.2 | |
| 1z6g_A | 218 | Guanylate kinase; structural genomics, SGC, struct | 93.09 | |
| 1kht_A | 192 | Adenylate kinase; phosphotransferase, signaling pr | 92.97 | |
| 3ld9_A | 223 | DTMP kinase, thymidylate kinase; ssgcid, NIH, niai | 92.95 | |
| 3tau_A | 208 | Guanylate kinase, GMP kinase; structural genomics, | 92.94 | |
| 4edh_A | 213 | DTMP kinase, thymidylate kinase; structural genomi | 92.91 | |
| 3u1c_A | 101 | Tropomyosin alpha-1 chain; anti-parallel coiled co | 92.89 | |
| 3t61_A | 202 | Gluconokinase; PSI-biology, structural genomics, p | 92.89 | |
| 2r8r_A | 228 | Sensor protein; KDPD, PFAM02702, MCSG, structural | 92.89 | |
| 1ex7_A | 186 | Guanylate kinase; substrate-induced FIT, domain mo | 92.87 | |
| 1htw_A | 158 | HI0065; nucleotide-binding fold, structural genomi | 92.87 | |
| 3ney_A | 197 | 55 kDa erythrocyte membrane protein; structural ge | 92.86 | |
| 1znw_A | 207 | Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans | 92.86 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 92.85 | |
| 1knq_A | 175 | Gluconate kinase; ALFA/beta structure, transferase | 92.84 | |
| 1nks_A | 194 | Adenylate kinase; thermophilic, transferase; HET: | 92.79 | |
| 1cke_A | 227 | CK, MSSA, protein (cytidine monophosphate kinase); | 92.79 | |
| 2bbw_A | 246 | Adenylate kinase 4, AK4; nucleotide kinase, nucleo | 92.79 | |
| 2qor_A | 204 | Guanylate kinase; phosphotransferase, purine metab | 92.77 | |
| 1ly1_A | 181 | Polynucleotide kinase; PNK, phosphatase, transfera | 92.71 | |
| 1via_A | 175 | Shikimate kinase; structural genomics, transferase | 92.7 | |
| 2orw_A | 184 | Thymidine kinase; TMTK, TP4A, transferase; HET: 4T | 92.69 | |
| 1kgd_A | 180 | CASK, peripheral plasma membrane CASK; maguk, guan | 92.69 | |
| 2qor_A | 204 | Guanylate kinase; phosphotransferase, purine metab | 92.68 | |
| 1lvg_A | 198 | Guanylate kinase, GMP kinase; transferase; HET: AD | 92.63 | |
| 2bdt_A | 189 | BH3686; alpha-beta protein, structural genomics, P | 92.59 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 92.58 | |
| 3vaa_A | 199 | Shikimate kinase, SK; structural genomics, center | 92.55 | |
| 2j41_A | 207 | Guanylate kinase; GMP, GMK, transferase, ATP-bindi | 92.51 | |
| 3jvv_A | 356 | Twitching mobility protein; hexameric P-loop ATPas | 92.48 | |
| 2rhm_A | 193 | Putative kinase; P-loop containing nucleoside trip | 92.45 | |
| 1zp6_A | 191 | Hypothetical protein ATU3015; alpha-beta protein., | 92.42 | |
| 3lw7_A | 179 | Adenylate kinase related protein (ADKA-like); AMP, | 92.41 | |
| 3trf_A | 185 | Shikimate kinase, SK; amino acid biosynthesis, tra | 92.4 | |
| 3cm0_A | 186 | Adenylate kinase; ATP-binding, cytoplasm, nucleoti | 92.4 | |
| 3iij_A | 180 | Coilin-interacting nuclear ATPase protein; alpha a | 92.33 | |
| 2f1r_A | 171 | Molybdopterin-guanine dinucleotide biosynthesis pr | 92.26 | |
| 3ney_A | 197 | 55 kDa erythrocyte membrane protein; structural ge | 92.16 | |
| 3a8t_A | 339 | Adenylate isopentenyltransferase; rossmann fold pr | 92.06 | |
| 4gp7_A | 171 | Metallophosphoesterase; polynucleotide kinase phos | 92.05 | |
| 3a8t_A | 339 | Adenylate isopentenyltransferase; rossmann fold pr | 92.04 | |
| 2v54_A | 204 | DTMP kinase, thymidylate kinase; nucleotide biosyn | 91.94 | |
| 2i3b_A | 189 | HCR-ntpase, human cancer-related ntpase; AAA, ross | 91.94 | |
| 2jaq_A | 205 | Deoxyguanosine kinase; transferase, deoxyribonucle | 91.92 | |
| 1rz3_A | 201 | Hypothetical protein rbstp0775; MCSG, structural g | 91.88 | |
| 1qhx_A | 178 | CPT, protein (chloramphenicol phosphotransferase); | 91.86 | |
| 3exa_A | 322 | TRNA delta(2)-isopentenylpyrophosphate transferase | 91.85 | |
| 1e6c_A | 173 | Shikimate kinase; phosphoryl transfer, ADP, shikim | 91.85 | |
| 1y63_A | 184 | LMAJ004144AAA protein; structural genomics, protei | 91.84 | |
| 3tau_A | 208 | Guanylate kinase, GMP kinase; structural genomics, | 91.81 | |
| 1kag_A | 173 | SKI, shikimate kinase I; transferase, structural g | 91.8 | |
| 3e1s_A | 574 | Exodeoxyribonuclease V, subunit RECD; alpha and be | 91.76 | |
| 2iyv_A | 184 | Shikimate kinase, SK; transferase, aromatic amino | 91.74 | |
| 2bwj_A | 199 | Adenylate kinase 5; phosphoryl transfer reaction, | 91.7 | |
| 3fb4_A | 216 | Adenylate kinase; psychrophIle, phosphotransferase | 91.68 | |
| 2ze6_A | 253 | Isopentenyl transferase; crown GALL tumor, cytokin | 91.65 | |
| 3umf_A | 217 | Adenylate kinase; rossmann fold, transferase; 2.05 | 91.61 | |
| 2v9p_A | 305 | Replication protein E1; AAA+ molecular motor, DNA | 91.61 | |
| 2oap_1 | 511 | GSPE-2, type II secretion system protein; hexameri | 91.61 | |
| 1tev_A | 196 | UMP-CMP kinase; ploop, NMP binding region, LID reg | 91.6 | |
| 3aez_A | 312 | Pantothenate kinase; transferase, homodimer, COA b | 91.59 | |
| 3sr0_A | 206 | Adenylate kinase; phosphoryl transfer analogue, AL | 91.58 | |
| 3e1s_A | 574 | Exodeoxyribonuclease V, subunit RECD; alpha and be | 91.56 | |
| 1zak_A | 222 | Adenylate kinase; ATP:AMP-phosphotransferase, tran | 91.56 | |
| 3tif_A | 235 | Uncharacterized ABC transporter ATP-binding prote; | 91.51 | |
| 1np6_A | 174 | Molybdopterin-guanine dinucleotide biosynthesis pr | 91.5 | |
| 2cdn_A | 201 | Adenylate kinase; phosphoryl transfer, associative | 91.49 | |
| 4e22_A | 252 | Cytidylate kinase; P-loop, CMP/ATP binding, transf | 91.46 | |
| 1rj9_A | 304 | FTSY, signal recognition protein; SRP-GTPase domai | 91.44 | |
| 1p9r_A | 418 | General secretion pathway protein E; bacterial typ | 91.4 | |
| 2cvh_A | 220 | DNA repair and recombination protein RADB; filamen | 91.39 | |
| 1zuh_A | 168 | Shikimate kinase; alpha-beta protein, transferase; | 91.36 | |
| 2yvu_A | 186 | Probable adenylyl-sulfate kinase; transferase, str | 91.34 | |
| 2pt5_A | 168 | Shikimate kinase, SK; aromatic amino acid biosynth | 91.33 | |
| 3u59_A | 101 | Tropomyosin beta chain; muscle contraction, actin, | 91.33 | |
| 3kb2_A | 173 | SPBC2 prophage-derived uncharacterized protein YOR | 91.33 | |
| 1gvn_B | 287 | Zeta; postsegregational killing system, plasmid; 1 | 91.27 | |
| 1knq_A | 175 | Gluconate kinase; ALFA/beta structure, transferase | 91.26 | |
| 3lnc_A | 231 | Guanylate kinase, GMP kinase; ALS collaborative cr | 91.21 | |
| 1aky_A | 220 | Adenylate kinase; ATP:AMP phosphotransferase, myok | 91.18 | |
| 1z6g_A | 218 | Guanylate kinase; structural genomics, SGC, struct | 91.18 | |
| 3b85_A | 208 | Phosphate starvation-inducible protein; PHOH2, ATP | 91.16 | |
| 3a00_A | 186 | Guanylate kinase, GMP kinase; domain movement, dim | 91.13 | |
| 3b9q_A | 302 | Chloroplast SRP receptor homolog, alpha subunit CP | 91.13 | |
| 1xjc_A | 169 | MOBB protein homolog; structural genomics, midwest | 91.11 | |
| 3cmu_A | 2050 | Protein RECA, recombinase A; homologous recombinat | 91.07 | |
| 1qf9_A | 194 | UMP/CMP kinase, protein (uridylmonophosphate/cytid | 91.06 | |
| 3r20_A | 233 | Cytidylate kinase; structural genomics, seattle st | 91.06 | |
| 1zuh_A | 168 | Shikimate kinase; alpha-beta protein, transferase; | 91.01 | |
| 1via_A | 175 | Shikimate kinase; structural genomics, transferase | 91.01 | |
| 3d3q_A | 340 | TRNA delta(2)-isopentenylpyrophosphate transferase | 91.01 | |
| 3e70_C | 328 | DPA, signal recognition particle receptor; FTSY, S | 90.99 | |
| 3exa_A | 322 | TRNA delta(2)-isopentenylpyrophosphate transferase | 90.97 | |
| 3iij_A | 180 | Coilin-interacting nuclear ATPase protein; alpha a | 90.93 | |
| 3eph_A | 409 | TRNA isopentenyltransferase; transferase, alternat | 90.91 | |
| 2wwf_A | 212 | Thymidilate kinase, putative; transferase, malaria | 90.89 | |
| 2onk_A | 240 | Molybdate/tungstate ABC transporter, ATP-binding p | 90.88 | |
| 1nn5_A | 215 | Similar to deoxythymidylate kinase (thymidylate K; | 90.88 | |
| 3dl0_A | 216 | Adenylate kinase; phosphotransferase, zinc coordin | 90.86 | |
| 1zd8_A | 227 | GTP:AMP phosphotransferase mitochondrial; ATP:AMP | 90.86 | |
| 3nwj_A | 250 | ATSK2; P loop, shikimate, nucleoside monophosphate | 90.85 | |
| 3foz_A | 316 | TRNA delta(2)-isopentenylpyrophosphate transferas; | 90.79 | |
| 2pez_A | 179 | Bifunctional 3'-phosphoadenosine 5'- phosphosulfat | 90.74 | |
| 4eun_A | 200 | Thermoresistant glucokinase; putative sugar kinase | 90.74 | |
| 2oap_1 | 511 | GSPE-2, type II secretion system protein; hexameri | 90.73 | |
| 2ga8_A | 359 | Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn | 90.71 | |
| 2vli_A | 183 | Antibiotic resistance protein; transferase, tunica | 90.7 | |
| 3u1c_A | 101 | Tropomyosin alpha-1 chain; anti-parallel coiled co | 90.68 | |
| 2cbz_A | 237 | Multidrug resistance-associated protein 1; ABC pro | 90.68 | |
| 2pcj_A | 224 | ABC transporter, lipoprotein-releasing system ATP- | 90.67 | |
| 2b8t_A | 223 | Thymidine kinase; deoxyribonucleoside kinase, zinc | 90.63 | |
| 1gtv_A | 214 | TMK, thymidylate kinase; transferase, transferase | 90.62 | |
| 2gza_A | 361 | Type IV secretion system protein VIRB11; ATPase, h | 90.62 | |
| 1jjv_A | 206 | Dephospho-COA kinase; P-loop nucleotide-binding fo | 90.59 | |
| 2j41_A | 207 | Guanylate kinase; GMP, GMK, transferase, ATP-bindi | 90.59 | |
| 1e4v_A | 214 | Adenylate kinase; transferase(phosphotransferase); | 90.56 | |
| 2xb4_A | 223 | Adenylate kinase; ATP-binding, nucleotide-binding, | 90.52 | |
| 1m7g_A | 211 | Adenylylsulfate kinase; APS kinase, transferase, s | 90.51 | |
| 3dzd_A | 368 | Transcriptional regulator (NTRC family); sigma43 a | 90.51 | |
| 1s96_A | 219 | Guanylate kinase, GMP kinase; E.coli, dimer, SAD, | 90.48 | |
| 1sgw_A | 214 | Putative ABC transporter; structural genomics, P p | 90.42 | |
| 3tr0_A | 205 | Guanylate kinase, GMP kinase; purines, pyrimidines | 90.39 | |
| 2pbr_A | 195 | DTMP kinase, thymidylate kinase; transferase, nucl | 90.33 | |
| 2p5t_B | 253 | PEZT; postsegregational killing system, phosphoryl | 90.31 | |
| 2if2_A | 204 | Dephospho-COA kinase; alpha-beta protein, structur | 90.26 | |
| 4gkw_A | 167 | Spindle assembly abnormal protein 6; double helix, | 90.26 | |
| 1gvn_B | 287 | Zeta; postsegregational killing system, plasmid; 1 | 90.23 | |
| 3gfo_A | 275 | Cobalt import ATP-binding protein CBIO 1; structur | 90.2 | |
| 3be4_A | 217 | Adenylate kinase; malaria, cryptosporidium parvum | 90.19 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 90.19 | |
| 2a5y_B | 549 | CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis | 90.15 | |
| 1b0u_A | 262 | Histidine permease; ABC transporter, transport pro | 90.06 | |
| 2ff7_A | 247 | Alpha-hemolysin translocation ATP-binding protein | 90.06 | |
| 2jeo_A | 245 | Uridine-cytidine kinase 1; UCK, transferase, ATP-b | 90.05 | |
| 1ukz_A | 203 | Uridylate kinase; transferase; HET: ADP AMP; 1.90A | 90.05 | |
| 3kta_A | 182 | Chromosome segregation protein SMC; structural mai | 90.03 | |
| 3fvq_A | 359 | Fe(3+) IONS import ATP-binding protein FBPC; nucle | 90.02 | |
| 3llm_A | 235 | ATP-dependent RNA helicase A; alpha-beta-alpha, st | 90.0 | |
| 2og2_A | 359 | Putative signal recognition particle receptor; nuc | 89.93 | |
| 1mv5_A | 243 | LMRA, multidrug resistance ABC transporter ATP-bin | 89.93 | |
| 1g6h_A | 257 | High-affinity branched-chain amino acid transport | 89.92 | |
| 3tlx_A | 243 | Adenylate kinase 2; structural genomics, structura | 89.91 | |
| 2iyv_A | 184 | Shikimate kinase, SK; transferase, aromatic amino | 89.89 | |
| 1e6c_A | 173 | Shikimate kinase; phosphoryl transfer, ADP, shikim | 89.89 | |
| 2rhm_A | 193 | Putative kinase; P-loop containing nucleoside trip | 89.89 | |
| 3tlx_A | 243 | Adenylate kinase 2; structural genomics, structura | 89.87 | |
| 1ji0_A | 240 | ABC transporter; ATP binding protein, structural g | 89.84 | |
| 2px0_A | 296 | Flagellar biosynthesis protein FLHF; SRP GTPase, f | 89.82 | |
| 1y63_A | 184 | LMAJ004144AAA protein; structural genomics, protei | 89.8 | |
| 4g1u_C | 266 | Hemin import ATP-binding protein HMUV; membrane tr | 89.73 | |
| 2ghi_A | 260 | Transport protein; multidrug resistance protein, M | 89.68 | |
| 2d2e_A | 250 | SUFC protein; ABC-ATPase, SUF protein, 310-helix, | 89.67 | |
| 4a74_A | 231 | DNA repair and recombination protein RADA; hydrola | 89.64 | |
| 2gza_A | 361 | Type IV secretion system protein VIRB11; ATPase, h | 89.64 | |
| 3t61_A | 202 | Gluconokinase; PSI-biology, structural genomics, p | 89.63 | |
| 2iut_A | 574 | DNA translocase FTSK; nucleotide-binding, chromoso | 89.63 | |
| 2pze_A | 229 | Cystic fibrosis transmembrane conductance regulat; | 89.62 | |
| 1odf_A | 290 | YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser | 89.61 | |
| 3rlf_A | 381 | Maltose/maltodextrin import ATP-binding protein M; | 89.61 | |
| 2zu0_C | 267 | Probable ATP-dependent transporter SUFC; iron-sulf | 89.6 | |
| 3cm0_A | 186 | Adenylate kinase; ATP-binding, cytoplasm, nucleoti | 89.58 | |
| 2olj_A | 263 | Amino acid ABC transporter; ABC domain, ATPase, hy | 89.58 | |
| 1aky_A | 220 | Adenylate kinase; ATP:AMP phosphotransferase, myok | 89.57 | |
| 2pt7_A | 330 | CAG-ALFA; ATPase, protein-protein complex, type IV | 89.55 | |
| 1ak2_A | 233 | Adenylate kinase isoenzyme-2; nucleoside monophosp | 89.53 | |
| 3bas_A | 89 | Myosin heavy chain, striated muscle/general contro | 89.49 | |
| 1z47_A | 355 | CYSA, putative ABC-transporter ATP-binding protein | 89.47 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 89.47 | |
| 2eqb_B | 97 | RAB guanine nucleotide exchange factor SEC2; coile | 89.44 | |
| 2ixe_A | 271 | Antigen peptide transporter 1; ABC ATPase, hydrola | 89.44 | |
| 1vpl_A | 256 | ABC transporter, ATP-binding protein; TM0544, stru | 89.43 | |
| 3lw7_A | 179 | Adenylate kinase related protein (ADKA-like); AMP, | 89.43 | |
| 1oix_A | 191 | RAS-related protein RAB-11A; small G protein, intr | 89.4 | |
| 1xx6_A | 191 | Thymidine kinase; NESG, northeast structural genom | 89.4 | |
| 4b3f_X | 646 | DNA-binding protein smubp-2; hydrolase, helicase; | 89.38 | |
| 2qt1_A | 207 | Nicotinamide riboside kinase 1; non-protein kinase | 89.36 | |
| 2yyz_A | 359 | Sugar ABC transporter, ATP-binding protein; sugar | 89.32 | |
| 1svm_A | 377 | Large T antigen; AAA+ fold, viral protein; HET: AT | 89.32 | |
| 2it1_A | 362 | 362AA long hypothetical maltose/maltodextrin trans | 89.26 | |
| 2c95_A | 196 | Adenylate kinase 1; transferase, AP4A, nucleotide | 89.25 | |
| 1ic2_A | 81 | Tropomyosin alpha chain, skeletal muscle; alpha-he | 89.22 | |
| 2yhs_A | 503 | FTSY, cell division protein FTSY; cell cycle, prot | 89.19 | |
| 3nh6_A | 306 | ATP-binding cassette SUB-family B member 6, mitoc; | 89.18 | |
| 2f9l_A | 199 | RAB11B, member RAS oncogene family; RAB11B GTPase, | 89.18 | |
| 2qi9_C | 249 | Vitamin B12 import ATP-binding protein BTUD; inner | 89.12 | |
| 1n0w_A | 243 | DNA repair protein RAD51 homolog 1; DNA repair, ho | 89.12 | |
| 2ihy_A | 279 | ABC transporter, ATP-binding protein; ATPase, ABC | 89.09 | |
| 2ehv_A | 251 | Hypothetical protein PH0186; KAIC, RECA ATPase, un | 89.07 | |
| 1w36_D | 608 | RECD, exodeoxyribonuclease V alpha chain; recombin | 89.03 | |
| 2j9r_A | 214 | Thymidine kinase; TK1, DNK, lasso, transferase, AT | 89.01 | |
| 3io5_A | 333 | Recombination and repair protein; storage dimer, i | 89.01 | |
| 2v54_A | 204 | DTMP kinase, thymidylate kinase; nucleotide biosyn | 88.98 | |
| 1znw_A | 207 | Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans | 88.96 | |
| 1cke_A | 227 | CK, MSSA, protein (cytidine monophosphate kinase); | 88.92 | |
| 2pt5_A | 168 | Shikimate kinase, SK; aromatic amino acid biosynth | 88.91 | |
| 1v43_A | 372 | Sugar-binding transport ATP-binding protein; ATPas | 88.88 | |
| 2cdn_A | 201 | Adenylate kinase; phosphoryl transfer, associative | 88.86 | |
| 3nwj_A | 250 | ATSK2; P loop, shikimate, nucleoside monophosphate | 88.84 | |
| 1g29_1 | 372 | MALK, maltose transport protein MALK; ATPase, acti | 88.82 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 88.82 | |
| 2qag_B | 427 | Septin-6, protein NEDD5; cell cycle, cell division | 88.81 | |
| 2nq2_C | 253 | Hypothetical ABC transporter ATP-binding protein H | 88.79 | |
| 2qmh_A | 205 | HPR kinase/phosphorylase; V267F mutation, ATP-bind | 88.77 | |
| 3o0z_A | 168 | RHO-associated protein kinase 1; coiled-coil, tran | 88.77 | |
| 1tq4_A | 413 | IIGP1, interferon-inducible GTPase; interferon gam | 88.77 | |
| 2npi_A | 460 | Protein CLP1; CLP1-PCF11 complex, ATP binding, ter | 88.74 | |
| 1u0j_A | 267 | DNA replication protein; AAA+ protein, P-loop atpa | 88.74 | |
| 3dl0_A | 216 | Adenylate kinase; phosphotransferase, zinc coordin | 88.73 | |
| 3uie_A | 200 | Adenylyl-sulfate kinase 1, chloroplastic; rossmann | 88.71 | |
| 2pt7_A | 330 | CAG-ALFA; ATPase, protein-protein complex, type IV | 88.71 | |
| 3c8u_A | 208 | Fructokinase; YP_612366.1, putative fructose trans | 88.67 | |
| 3tqc_A | 321 | Pantothenate kinase; biosynthesis of cofactors, pr | 88.66 | |
| 2pez_A | 179 | Bifunctional 3'-phosphoadenosine 5'- phosphosulfat | 88.63 | |
| 2yz2_A | 266 | Putative ABC transporter ATP-binding protein TM_0; | 88.62 | |
| 1w36_D | 608 | RECD, exodeoxyribonuclease V alpha chain; recombin | 88.62 | |
| 2qmh_A | 205 | HPR kinase/phosphorylase; V267F mutation, ATP-bind | 88.62 | |
| 1sq5_A | 308 | Pantothenate kinase; P-loop, transferase; HET: PAU | 88.61 | |
| 3gd7_A | 390 | Fusion complex of cystic fibrosis transmembrane co | 88.61 | |
| 3crm_A | 323 | TRNA delta(2)-isopentenylpyrophosphate transferase | 88.57 | |
| 1odf_A | 290 | YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser | 88.53 | |
| 1tev_A | 196 | UMP-CMP kinase; ploop, NMP binding region, LID reg | 88.49 | |
| 1ly1_A | 181 | Polynucleotide kinase; PNK, phosphatase, transfera | 88.47 | |
| 1vht_A | 218 | Dephospho-COA kinase; structural genomics, transfe | 88.45 | |
| 3d31_A | 348 | Sulfate/molybdate ABC transporter, ATP-binding pro | 88.42 | |
| 2bwj_A | 199 | Adenylate kinase 5; phosphoryl transfer reaction, | 88.38 | |
| 1htw_A | 158 | HI0065; nucleotide-binding fold, structural genomi | 88.38 | |
| 1qf9_A | 194 | UMP/CMP kinase, protein (uridylmonophosphate/cytid | 88.36 | |
| 2vli_A | 183 | Antibiotic resistance protein; transferase, tunica | 88.35 | |
| 1uf9_A | 203 | TT1252 protein; P-loop, nucleotide binding domain, | 88.35 | |
| 1zd8_A | 227 | GTP:AMP phosphotransferase mitochondrial; ATP:AMP | 88.31 | |
| 3sr0_A | 206 | Adenylate kinase; phosphoryl transfer analogue, AL | 88.23 | |
| 2pjz_A | 263 | Hypothetical protein ST1066; ATP binding protein, | 88.22 | |
| 2grj_A | 192 | Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp | 88.21 | |
| 3fb4_A | 216 | Adenylate kinase; psychrophIle, phosphotransferase | 88.19 | |
| 4gp7_A | 171 | Metallophosphoesterase; polynucleotide kinase phos | 88.18 | |
| 1vma_A | 306 | Cell division protein FTSY; TM0570, structural gen | 88.11 | |
| 3dm5_A | 443 | SRP54, signal recognition 54 kDa protein; protein- | 88.08 | |
| 2vhj_A | 331 | Ntpase P4, P4; non- hydrolysable ATP analogue, hyd | 88.04 | |
| 2ius_A | 512 | DNA translocase FTSK; nucleotide-binding, chromoso | 88.0 | |
| 1zj6_A | 187 | ADP-ribosylation factor-like protein 5; ARL, GTP-b | 87.96 | |
| 1f2t_A | 149 | RAD50 ABC-ATPase; DNA double-strand break repair, | 87.89 | |
| 2jaq_A | 205 | Deoxyguanosine kinase; transferase, deoxyribonucle | 87.86 | |
| 3d3q_A | 340 | TRNA delta(2)-isopentenylpyrophosphate transferase | 87.84 | |
| 3be4_A | 217 | Adenylate kinase; malaria, cryptosporidium parvum | 87.81 | |
| 4e22_A | 252 | Cytidylate kinase; P-loop, CMP/ATP binding, transf | 87.79 | |
| 3tui_C | 366 | Methionine import ATP-binding protein METN; ABC-tr | 87.74 | |
| 1kht_A | 192 | Adenylate kinase; phosphotransferase, signaling pr | 87.72 | |
| 1e4v_A | 214 | Adenylate kinase; transferase(phosphotransferase); | 87.68 | |
| 2bbs_A | 290 | Cystic fibrosis transmembrane conductance regulato | 87.66 | |
| 1z2a_A | 168 | RAS-related protein RAB-23; RAB GTPase, vesicular | 87.64 | |
| 1lw7_A | 365 | Transcriptional regulator NADR; NMN, NMN adenylyl | 87.61 | |
| 2eyu_A | 261 | Twitching motility protein PILT; pilus retraction | 87.6 | |
| 2wji_A | 165 | Ferrous iron transport protein B homolog; membrane | 87.6 | |
| 2z43_A | 324 | DNA repair and recombination protein RADA; archaea | 87.53 | |
| 1oxx_K | 353 | GLCV, glucose, ABC transporter, ATP binding protei | 87.51 | |
| 2dyk_A | 161 | GTP-binding protein; GTPase, ribosome-binding prot | 87.47 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 87.45 | |
| 2yv5_A | 302 | YJEQ protein; hydrolase, GTPase, permutation, stru | 87.43 | |
| 2w0m_A | 235 | SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus | 87.38 | |
| 3ake_A | 208 | Cytidylate kinase; CMP kinase, CMP complex, open c | 87.35 | |
| 2zej_A | 184 | Dardarin, leucine-rich repeat kinase 2; parkinson' | 87.32 | |
| 2w0m_A | 235 | SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus | 87.24 | |
| 2if2_A | 204 | Dephospho-COA kinase; alpha-beta protein, structur | 87.21 | |
| 1ukz_A | 203 | Uridylate kinase; transferase; HET: ADP AMP; 1.90A | 87.21 | |
| 3bh0_A | 315 | DNAB-like replicative helicase; ATPase, replicatio | 87.15 | |
| 1p9r_A | 418 | General secretion pathway protein E; bacterial typ | 87.11 | |
| 4ag6_A | 392 | VIRB4 ATPase, type IV secretory pathway VIRB4 comp | 87.09 | |
| 2ce2_X | 166 | GTPase HRAS; signaling protein, guanine nucleotide | 87.08 | |
| 3r20_A | 233 | Cytidylate kinase; structural genomics, seattle st | 87.07 | |
| 3u59_A | 101 | Tropomyosin beta chain; muscle contraction, actin, | 87.02 | |
| 4a74_A | 231 | DNA repair and recombination protein RADA; hydrola | 87.01 | |
| 2plr_A | 213 | DTMP kinase, probable thymidylate kinase; TMP-bind | 87.0 | |
| 1kao_A | 167 | RAP2A; GTP-binding protein, small G protein, GDP, | 86.98 | |
| 1m2o_B | 190 | GTP-binding protein SAR1, GTP binding protein; zin | 86.88 | |
| 1qhl_A | 227 | Protein (cell division protein MUKB); SMC, chromos | 86.85 | |
| 2ga8_A | 359 | Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn | 86.83 |
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-285 Score=2953.88 Aligned_cols=1460 Identities=60% Similarity=1.041 Sum_probs=1292.8
Q ss_pred hhHHHHHHHHHHhccCccCCCCCCCchHHHHHHHHHHHHHhccEEEEecCCCCChhhHHHHHHHHHHHhhcCCceEEEeC
Q psy568 2 TGLKEKIKEVCREEFLVCGEGNEEGGPWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAWKVLLKALERYEGVEGVAHIID 81 (1614)
Q Consensus 2 ~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~K~~qL~e~~~~r~gVmlvG~~gsGKTt~~~~L~~al~~~~~~~~~~~~in 81 (1614)
+.|+++|+++|++.||+ +++.|+.||+||||++.+||||||||||||||||||++|++|++++.+.+++.++||
T Consensus 871 ~~l~~ai~~~~~~~~L~------~~~~~v~KviQLye~~~vRhGvmlVGp~gsGKTt~~~~L~~al~~l~~~~~~~~~iN 944 (3245)
T 3vkg_A 871 DQLRKKIQEIAKQRHLV------TKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMD 944 (3245)
T ss_dssp HHHHHHHHHHHHHTTCC------CCHHHHHHHHHHHHHHTTCSEEEEECSSSSSHHHHHHHHHHHHTTTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCc------cCHHHHHHHHHHHHHHHheeeEEEECCCCCCHHHHHHHHHHHHHHhhCCCceEEEEC
Confidence 46899999999999876 678999999999999999999999999999999999999999999988788899999
Q ss_pred CCCCCcCcccccccCCCCccccchHHHHHHHHHhhhcCCCCCceEEEEccCCChhhhhhhhhhhcCCCccccCCCceeeC
Q psy568 82 PKAISKEALYGVLDPNTREWTDGLFTHILRRIIDNVRGEISKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSL 161 (1614)
Q Consensus 82 Pkais~~eLyG~~d~~t~eW~DGvls~i~r~~~~~~~~~~~~~~WivfDG~vd~~WiE~lnsvLDdnk~L~L~nGeri~l 161 (1614)
|||||++||||++||+|+||+||||++++|+++++.+++..+++||||||||||.|||||||||||||+|||+|||||+|
T Consensus 945 PKait~~eLyG~~d~~T~EW~DGvls~i~R~~~~~~~~~~~~~~WIvfDGpVDa~WIEnlNsVLDDNK~LtL~nGErI~l 1024 (3245)
T 3vkg_A 945 PKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLAL 1024 (3245)
T ss_dssp TTTSCHHHHHEEECTTTCCEEECHHHHHHHHHHTTSSSGGGEEEEEEEESCCCHHHHTTTHHHHSSSCEECCTTSCCEEC
T ss_pred CCCCchhhhceeecCCCCeeeccHHHHHHHHHHhcccCCCCCceEEEECCCCCHHHHHHHHHHhcCCCeeecCCCCeeec
Confidence 99999999999999999999999999999999876556667799999999999999999999999999999999999999
Q ss_pred CCCceEEEEeccccccCccccccceeEEecCcccchHHHHHHHHHhhhccccCCcccchh-------------hhHhhcc
Q psy568 162 PPNIRIMFEVQDLKYATLATVSRCGMIWFSEDVLSTEMIFENYLSRLRNIALDDIDDDSS-------------LLITVDA 228 (1614)
Q Consensus 162 ~~~~~~iFEv~dL~~ASPAtVSRcgmv~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 228 (1614)
||+|+|||||+||++||||||||||||||+++++||+|++++|+.+++..+......+.. ..+....
T Consensus 1025 ~~~~~liFEv~dL~~ASPATVSRcGmVy~~~~~l~~~~~~~swl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1104 (3245)
T 3vkg_A 1025 PNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENAQLQQQQQTTITSPI 1104 (3245)
T ss_dssp CTTEEEEEEESCCTTCCHHHHHTSEEEECCTTSSCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHTC--------------
T ss_pred CCCCEEEEEeccccccChhhheeeeEEEEcccccCchHHHHHHHHhCccccccchhhhhhcccccchhhhcccccccccc
Confidence 999999999999999999999999999999999999999999999876543321110000 0000000
Q ss_pred ------------CCCCCCcccchhHHHHHHHHHHhhhccCCcchHHHHHHHhhhcccccccchHHHHHHHHHHHHHHhhh
Q psy568 229 ------------TGKAPDDVLSPALTLQQDVASILSTHFAPDGLVVRALDYAMQQEHIMDFTRLRALGSLFSMLNQGVRN 296 (1614)
Q Consensus 229 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 296 (1614)
..........|....+..+..++..+|..++++..+++++....++++.+..+++.++++++...+.+
T Consensus 1105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~l~~~~~~~~i~~~~~~~~v~~l~~ll~~~~~~ 1184 (3245)
T 3vkg_A 1105 LTSPPTTSSSSRSTTSTTSMIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVN 1184 (3245)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHTSCCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhHHHHHHHHHHHHHHhcccccHHHHHHHHHhcCcccCccHHHHHHHHHHHHHHHhhh
Confidence 00001122334445555666777777766788999999998888899999999999999999887766
Q ss_pred hhhcCCCCCCCCCChHHHHhHHHHHHHHHHhhhcccCCCccchHHHHHHHhhhccccCCCCCCCeeEEEEecCCCceeec
Q psy568 297 VLQYNHSHSDFPLSQDVVERYIPRILVYSLLWSFAGDGKLKMRSDFGNFLRSVTTITLPATSSDIVDFEVNIKNGEWVPW 376 (1614)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~f~fa~~Ws~gg~l~~~~r~~f~~~l~~~~~~~~p~~~~~v~d~~~~~~~~~~~~w 376 (1614)
...++..+.+.+.+.+.++.+++.+|+||++|||||+++.++|..|+.|+++...+++|+.++++||||+|++++.|.+|
T Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~~~~~f~faliWs~Gg~l~~~~R~~F~~~~~~~~~~~~p~~~~~v~Dy~~~~~~~~w~~W 1264 (3245)
T 3vkg_A 1185 VIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLW 1264 (3245)
T ss_dssp HHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHTTCSSCCCCTTSCGGGEEECTTTCSEEET
T ss_pred hcccccccccCCCCHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEECCCCeeeeh
Confidence 55444334445566778888999999999999999999999999999999999888888777899999999999999999
Q ss_pred CCCCccccccccccCCcceeeeCcchhhHHHHHHHHHhcCCCEEEecCCCCchHHHHHHHHhcCCCCceEEEEcccCCCH
Q psy568 377 SNKVPQIEVETQKVAASDVVVPTLDTVRHESLLYTWLAEHKPLVLCGPPGSGKTMTLLSALRALPDMEVVSLNFSSATTP 456 (1614)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~vpT~~t~r~~~ll~~~l~~~~~vLL~Gp~GtGKT~lv~~~~~~l~~~~~~~i~~s~~t~~ 456 (1614)
.+.+|.+.+++..+++.+++|||+||+|+.+++..++..++||||+||||||||+++.++++.+++..++.+|||++|++
T Consensus 1265 ~~~v~~~~~~~~~~~~~~ilVPT~DTvR~~~ll~~ll~~~~pvLL~GptGtGKT~li~~~L~~l~~~~~~~infS~~Tta 1344 (3245)
T 3vkg_A 1265 KNKVPSVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTP 1344 (3245)
T ss_dssp TCCC---CCCSTTTTCTTCCCCCHHHHHHHHHHHHHHHTTCCCEEESSTTSSHHHHHHHHGGGCTTEEEEEECCCTTCCH
T ss_pred hhcCCccccCCccCCcccceecchHHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHHHhCCCCceEEEEeeCCCCH
Confidence 99999998877767889999999999999999999999999999999999999999999999988888899999999999
Q ss_pred HHHHhHhhcccceeecCC-ccccccccCCceEEEEeccCCCCCccccCcccHHHHHHHHHHcCceeeCCCCceEeecCeE
Q psy568 457 ELLLKTFDHYCEYRKTPN-GVILSPIQLGKWLVLFCDEINLPDMDKYATQRVISFLRQLIEQRGFYRPADKQWVSLERIQ 535 (1614)
Q Consensus 457 ~~l~~~~~~~~~~~~~~~-g~~~~p~~~gk~~vlfiDdin~p~~d~~g~q~~lelLrqlld~~~~~~~~~~~~~~~~~~~ 535 (1614)
..+++.+++.++++.+++ |++++|++.|+++|+||||||||.+|+||+|+++|+|||++|+||||++.++.|+.+++++
T Consensus 1345 ~~l~~~~e~~~e~~~~~~~G~~~~p~~~Gk~~VlFiDDiNmp~~D~yGtQ~~ielLrqlld~~g~yd~~~~~~~~i~d~~ 1424 (3245)
T 3vkg_A 1345 ELLLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQ 1424 (3245)
T ss_dssp HHHHHHHHHHEEEEECTTSCEEEEESSTTCEEEEEETTTTCCCCCTTSCCHHHHHHHHHHHHSEEEETTTTEEEEESSEE
T ss_pred HHHHHHHhhcceEEeccCCCcccCCCcCCceEEEEecccCCCCccccccccHHHHHHHHHHcCCeEECCCCeEEEecCeE
Confidence 999999999999887666 9999998779999999999999999999999999999999999999999889999999999
Q ss_pred EEEeecCCCCCCCCCCcccccccccEEEecCCChhHHHHHHHHHHHhhhhcchhhhhhHHHHHHHHHHHHHHHHhhcCCC
Q psy568 536 CVGACNPPTDPGRKPLSHRFLRHVPVIYVDYPGETSLKQIYGTFSRAMLRLIPPLRGYADALTNAMVELYLASQEKFTQD 615 (1614)
Q Consensus 536 ~iaa~n~~~~~g~~~l~~r~~r~f~~i~i~~p~~~~l~~I~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 615 (1614)
||||||||+++||+++++||+|||.++++++|+.+++..||++++..++.+.+.+..++..++++++++|..++..|+|+
T Consensus 1425 ~vaamnPp~~gGr~~l~~Rf~r~F~vi~i~~ps~esL~~If~til~~~l~~~p~l~~~~~~lv~ati~ly~~v~~~~lp~ 1504 (3245)
T 3vkg_A 1425 FVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPD 1504 (3245)
T ss_dssp EEEEECCTTSTTCCCCCHHHHTTCCEEECCCCCHHHHHHHHHHHHHHHTTSCGGGTTSHHHHHHHHHHHHHHHHHHSCTT
T ss_pred EEEEcCCCCCCCCccCCHHHHhhceEEEeCCCCHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999878999999999999999999999999999999999999988889999999999999999999999999989
Q ss_pred CCCccccChhhHHHHhhhhhcccCCCccCCHHHHHHHHHHhhhhhhcccCCChhHHHHHHHHHHHHHHhhcCCcchhhcc
Q psy568 616 MQPHYVYSPREMTRWVRGICEAIRPLESLTVEGLVRLWAHEALRLFQDRLVNDVERQWTNENIDAVAMKYFSNIDKEVLA 695 (1614)
Q Consensus 616 ~~~hY~F~lRdl~~v~~~i~~~~~~~~~~~~~~l~~lw~hE~~Rvf~DRL~~~~d~~~~~~~l~~~~~~~f~~~~~~~~~ 695 (1614)
.++||.||||||+||++|++++..+....+.+.+++||+|||.|||+|||++++||.||.+.+.+++.++|+..+.....
T Consensus 1505 ~k~HY~FnLRDLsrv~qGll~~~~~~~~~~~~~lvrLW~HE~~RVF~DRLv~~~Dr~~f~~~l~~~~~~~F~~~~~~~~~ 1584 (3245)
T 3vkg_A 1505 IQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALK 1584 (3245)
T ss_dssp TSTTCCCCHHHHHHHHHHHHHHHHTSSCCCTTHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHHHHHCTTSCGGGGC
T ss_pred cCCCccccHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCcchhhhcc
Confidence 99999999999999999999875565666889999999999999999999999999999999999999999876655667
Q ss_pred cCceeccCCcCCCcccChhHHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHhccCCccEEEeecCCCChHHHHH
Q psy568 696 RPILYSNWLSKNYVPVGTTELREYVQARLKVFYEEELDVQLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSR 775 (1614)
Q Consensus 696 ~~~~~~~~~~~~~~~v~~~~l~~~~~~~l~~~~~~~~~~~lvlf~~~i~hi~ri~Ril~~p~gh~LLvG~~GsGKtsl~r 775 (1614)
.|++|++|+...|.+++.+++++++..++..|+++...|+||+|++|++|++||+|||++|+||+||||++||||+||+|
T Consensus 1585 ~pllf~~f~~~~Y~~v~~~~l~~~l~~~L~~yn~~~~~m~LVlF~daleHv~RI~RIL~qp~GhaLLVGvgGSGkqSLtr 1664 (3245)
T 3vkg_A 1585 RPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSR 1664 (3245)
T ss_dssp SSCCCCSSCC----CCCHHHHHHHHHHHHHTTC------CCCCCHHHHHHHHHHHHHHTSTTCCEEEEESTTSSHHHHHH
T ss_pred cCcchhhhccccCccCCHHHHHHHHHHHHHHHHhcccCceEEeHHHHHHHHHHHHHHHccCCCCeEEecCCCCcHHHHHH
Confidence 89999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEEecCCCChhcHHHHHHHHHHHhccCCCcEEEEEcCCcccccchHHHHHHhhccCCCCCCCChhhHHH
Q psy568 776 FVAFMNGLSVFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLERMNTLLANGEIPGLFEGDEYTT 855 (1614)
Q Consensus 776 laA~~~~~~~~~i~~~~~~~~~df~~~lk~~l~~ag~~~~~~v~ll~d~~i~~~~~le~in~lL~~G~v~~Lf~~eE~~~ 855 (1614)
||||++|+++|+|+++++|+..||++|||.++++||++|+++||+++|+||++++|||+||+||++|||||||+.||++.
T Consensus 1665 LAa~i~~~~vfqi~i~k~Y~~~~f~eDLk~l~~~aG~~~~~~vFL~tD~qi~~e~FLE~IN~lL~sGEVP~LF~~dE~~~ 1744 (3245)
T 3vkg_A 1665 FVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTA 1744 (3245)
T ss_dssp HHHHHTTCEEECCC----CCHHHHHHHHHHHHHHHHTSCCCEEEEEEGGGCSSTHHHHHHHHHHHHSCCTTSSCTTTHHH
T ss_pred HHHHHhCCeeEEEeeeCCCCHHHHHHHHHHHHHHHhcCCCCEEEEEeccccccHHHHHHHHHHhccCCccccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHcCCCCCCHHHHHHHHHHHHhhcceEEEEECCCChhhHHHhhhCccccccceecccCCCcHHHHHHHHHH
Q psy568 856 LMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTMNPSSEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKE 935 (1614)
Q Consensus 856 i~~~~~~~~~~~~~~~~s~~~l~~~f~~rv~~nlhivl~~sp~~~~~r~~~~~~PaL~~~~~i~wf~~W~~eaL~~va~~ 935 (1614)
|++.+|+.+++.|...+|++++|+||++|||+||||||||||+|+.||.|+|+||||+||||||||++||+|||.+||++
T Consensus 1745 i~~~~r~~a~~~g~~~dt~~~l~~~Fi~rvr~NLHvVL~mSPvg~~fR~R~r~fPaLvncctIDWf~~Wp~eAL~~Va~~ 1824 (3245)
T 3vkg_A 1745 LMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSE 1824 (3245)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHTTTCCEEEEECTTSTTTTC----CTHHHHHSEEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCEEEEEECCCCHHHHHHHHHChHHhhCceeeecCCCCHHHHHHHHHH
Confidence 99999999999997678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCCCCCCCcccc-----cccCCCcchhHHHHHHHHHHHhcHHHHHHHHHHhcCCccccCchhHHHHHHH
Q psy568 936 FTSKIDLDGPQNWKAPDFFPSVC-----SLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINH 1010 (1614)
Q Consensus 936 ~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~r~~~~tp~~yl~~l~~ 1010 (1614)
|+++++++.+. +..|...|..+ ......+..+++++++|+++|.++.+++.+|+++.+|++|+||++|++||++
T Consensus 1825 fl~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~sv~~~s~~~~~~~~R~~yvTP~syLeli~~ 1903 (3245)
T 3vkg_A 1825 FTRNLDLENPQ-YIAPPVFIQEAEIMGNNLMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQ 1903 (3245)
T ss_dssp HTTTSCCCCTT-CCCCHHHHHHHHC----CCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCHHHHHHHHHH
T ss_pred HHhhccccccc-ccccccccchhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHH
Confidence 99998775431 11111111110 0112345678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy568 1011 FVKLYREKCSELEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQSKNEAANLKLKEMIKDQQEAEKRKVQSQDIQA 1090 (1614)
Q Consensus 1011 f~~l~~~k~~~~~~~~~~l~~gL~kl~~~~~~v~~l~~~L~~~~~~l~~~~~~~~~~l~~i~~~~~~~e~~~~~~~~~~~ 1090 (1614)
|+.+|.+|+.++..+++||++||+||.+|.++|++|+.+|..++++|++++++++++|++|.+++++|++++..+++.++
T Consensus 1904 y~~ll~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~ 1983 (3245)
T 3vkg_A 1904 VVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQV 1983 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhHHHhhcCCCCcHHHHHHHHHHHHhcCCCCCCHHHHHHHh
Q psy568 1091 EIEKQTVEIAQKRVFVMEDLAQVEPAVMDAQQAVKEIKKQQLVELRSMANPPSVVKLALESICLLLGENATDWKAIRAVV 1170 (1614)
Q Consensus 1091 ~~~~~~~~~~~~k~~~~~~l~~a~p~l~~A~~al~~l~~~dl~Eirs~~~PP~~V~~v~eavc~Llg~~~~~W~~~k~~l 1170 (1614)
+++++.++++.++++|++||++|+|+
T Consensus 1984 ~~~~~~~ei~~~k~~~e~dL~~A~Pa------------------------------------------------------ 2009 (3245)
T 3vkg_A 1984 QLDVRNKEIAVQKVKAYADLEKAEPT------------------------------------------------------ 2009 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHCC------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC------------------------------------------------------
Confidence 99999999999999999999999999
Q ss_pred chhhhHHHHHhhcCCCCCcHHHHHHHHhhhcCCCCCCHHHHHhhhhchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy568 1171 MRENFINSIVSNFNTEMITDEVREKMHSRYLSNPDYSYEKANRASMACGPMVKWAIAQISYADMLKKVEPLRLELKSLEV 1250 (1614)
Q Consensus 1171 ~~~~F~~~l~~~~d~~~i~~~~~~~l~~~~~~~~~f~~~~~~~~S~aa~~L~~Wv~Ai~~y~~v~~~v~P~~~~l~~~~~ 1250 (1614)
+||+++++++++
T Consensus 2010 --------------------------------------------------------------------~Pkr~~l~~ae~ 2021 (3245)
T 3vkg_A 2010 --------------------------------------------------------------------GPLREEVEQLEN 2021 (3245)
T ss_dssp ---------------------------------------------------------------------CHHHHHHHHHH
T ss_pred --------------------------------------------------------------------ChHHHHHHHHHH
Confidence 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy568 1251 QASENKAKGEETKDLITQLEKSIASYKDEYAQLIAQATAIKTDLDNVQAKFYEYAQLIAQATAIKTDLDNVQAKVERSMA 1330 (1614)
Q Consensus 1251 ~~~~~~~~l~~~~~~l~~~e~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~rl~~a~~ 1330 (1614)
+++.++++|++++++|++++++++.|+++|++++++++++ +.+++.|+.||+||++
T Consensus 2022 ~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L------------------------~~e~~~~~~kl~rA~~ 2077 (3245)
T 3vkg_A 2022 AANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQI------------------------KTESSKVKNKVDRSIA 2077 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888877 7788899999999999
Q ss_pred HHHhhhhhhhhHHHHHHHHHHhhhhchhHHHHHHHHHHhhcccCHHhHHHHHHHHHHHHHhccCCCCCCCchhcccCCHH
Q psy568 1331 LLKSLGIERERWEATSETFRSQMATIIGDVLLSSAYLAYAGYFDQHYRQSLFSTWNSHLIAAGIQFRPEIALTEYLSSPD 1410 (1614)
Q Consensus 1331 l~~~L~~e~~rW~~~~~~~~~~~~~l~gd~ll~aa~i~Y~G~f~~~~R~~l~~~w~~~l~~~~I~~~~~~~~~~~l~~~~ 1410 (1614)
|+++|++|+.||++++++++.+.++++|||||||||++|+|||+.+||+.+++.|...|++.+||++++|++.++|+++.
T Consensus 2078 Li~gL~~Ek~RW~~~~~~l~~~~~~L~GD~LLaaafisY~G~f~~~~R~~l~~~W~~~l~~~~Ip~s~~~~l~~~L~~~~ 2157 (3245)
T 3vkg_A 2078 LLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRKWMIRLDSVGIKFKSDLSVPSFLSKPE 2157 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHTCCCCTTCCHHHHTSCHH
T ss_pred HHHhhhhccccHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCChhhHHHHHHHhhcCCcccccCCchHHHHHHHHhhccCCeEEeccCChhHHHHHHHHHHcCCcEEEee
Q psy568 1411 ERLRWQGNALPSDHLCTENAIMLRRFNRYPLIIDPSGQATEFILKEFESRKITKTSFLDDAFRKNLESALRFGNPLLVQD 1490 (1614)
Q Consensus 1411 ~~~~w~~~gLp~d~~s~eNaii~~~~~r~PLliDPq~qa~~wlk~~~~~~~~~v~s~~~~~~~~~le~ai~~G~~lli~d 1490 (1614)
++++|+.+|||+|++|+|||||++++.||||||||||||.+|||++++++++.|++++|++|+++||+||++|+||||||
T Consensus 2158 ~i~~W~~~GLP~D~lSiENaiiv~~~~R~PLlIDPq~Qa~~WIk~~~~~~~l~v~~~~d~~f~~~LE~ai~fG~pvLien 2237 (3245)
T 3vkg_A 2158 ERLNWHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFLDSSFMKNLESALRFGCPLLVQD 2237 (3245)
T ss_dssp HHHHHHHTTCCSSHHHHHHHHHTTSCSSCEEEECTTSHHHHHHHHHTGGGCCCCCCC-----HHHHHHHHHHTCCEECCC
T ss_pred HHHHHHhCCCCCCchhhhHHHHHhcCCCceEEEChHHHHHHHHHHHhccCCceEeecCchhHHHHHHHHHHcCCeEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcchhhhhhhhhccCCeEEEEeCCcccccCCCceEEEeeCCCCCCCCcccccceEEEEEeeChhhHHHHHHHHHH
Q psy568 1491 VENYDTILNPVLNRELRRTGGRVLITLGDQDIDISPTFVIFLSTRDPTVEFPPDICSRVTFVNFTVTRSSLQSQCLNRVL 1570 (1614)
Q Consensus 1491 ve~~dp~l~~vl~~~~~~~~~~~~i~ig~~~i~~~~~F~l~l~T~~~~p~~~p~~~~~~tvinf~vt~~gLe~qlL~~vv 1570 (1614)
||++||+|+|||.|++++.||+.+|++||++|+|||+|||||+||++||||+||++++||+||||||++|||+|||+.||
T Consensus 2238 vE~lDP~L~pvL~k~~~k~gg~~~I~lGdk~idy~~~FrlyltTkl~np~y~Pev~~kvtlINFtvT~~GLedQLL~~vv 2317 (3245)
T 3vkg_A 2238 VENIDPVLNPVLNKEIRKKGGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEAL 2317 (3245)
T ss_dssp CC----------------------------------CCCEEEEECCTTCCCCHHHHHTSEEEECCCCHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHhcCceEEEEECCeeEecCCCceEEEEecCCCCCCCHHHHhheEEEEEEecHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCC
Q psy568 1571 KAERPDIDTKRSDLLKLQGEFHLRLRHLEKSLLGALNESKGKLL 1614 (1614)
Q Consensus 1571 ~~e~p~le~~~~~l~~~~~~~~~~l~~le~~lL~~L~~~~g~il 1614 (1614)
.+|+||||++|++|+++.+++|++|++|||+||+.|++|+||||
T Consensus 2318 ~~ErPeLE~~r~~Li~~~~~~k~~L~~LEd~lL~~Ls~s~GniL 2361 (3245)
T 3vkg_A 2318 KTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNIL 2361 (3245)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHHHHHTTTHHHHHHHHTTSSCGG
T ss_pred HHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999997
|
| >4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A | Back alignment and structure |
|---|
| >2rr7_A Dynein heavy chain 9; microtubule-binding, stalk head, MTBD, antiparallel coil, motor protein, DSH; NMR {Chlamydomonas reinhardtii} | Back alignment and structure |
|---|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
| >4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* | Back alignment and structure |
|---|
| >1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 | Back alignment and structure |
|---|
| >3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* | Back alignment and structure |
|---|
| >3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* | Back alignment and structure |
|---|
| >1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 | Back alignment and structure |
|---|
| >3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* | Back alignment and structure |
|---|
| >2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
| >4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A | Back alignment and structure |
|---|
| >3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
| >3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A | Back alignment and structure |
|---|
| >1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} | Back alignment and structure |
|---|
| >2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A | Back alignment and structure |
|---|
| >3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} | Back alignment and structure |
|---|
| >1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* | Back alignment and structure |
|---|
| >2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* | Back alignment and structure |
|---|
| >3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* | Back alignment and structure |
|---|
| >3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C | Back alignment and structure |
|---|
| >3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* | Back alignment and structure |
|---|
| >3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} | Back alignment and structure |
|---|
| >3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A | Back alignment and structure |
|---|
| >3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G | Back alignment and structure |
|---|
| >2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} | Back alignment and structure |
|---|
| >3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* | Back alignment and structure |
|---|
| >3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* | Back alignment and structure |
|---|
| >2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* | Back alignment and structure |
|---|
| >3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* | Back alignment and structure |
|---|
| >1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A | Back alignment and structure |
|---|
| >3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* | Back alignment and structure |
|---|
| >3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A | Back alignment and structure |
|---|
| >3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
| >3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} | Back alignment and structure |
|---|
| >2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* | Back alignment and structure |
|---|
| >2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* | Back alignment and structure |
|---|
| >1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 | Back alignment and structure |
|---|
| >1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A* | Back alignment and structure |
|---|
| >2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* | Back alignment and structure |
|---|
| >2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* | Back alignment and structure |
|---|
| >1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* | Back alignment and structure |
|---|
| >3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} | Back alignment and structure |
|---|
| >3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19} | Back alignment and structure |
|---|
| >1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* | Back alignment and structure |
|---|
| >3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* | Back alignment and structure |
|---|
| >1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A | Back alignment and structure |
|---|
| >1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* | Back alignment and structure |
|---|
| >4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* | Back alignment and structure |
|---|
| >2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* | Back alignment and structure |
|---|
| >3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
| >2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* | Back alignment and structure |
|---|
| >3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* | Back alignment and structure |
|---|
| >1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G | Back alignment and structure |
|---|
| >2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} | Back alignment and structure |
|---|
| >4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* | Back alignment and structure |
|---|
| >4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* | Back alignment and structure |
|---|
| >1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* | Back alignment and structure |
|---|
| >4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A | Back alignment and structure |
|---|
| >1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
| >1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* | Back alignment and structure |
|---|
| >1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* | Back alignment and structure |
|---|
| >1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} | Back alignment and structure |
|---|
| >2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} | Back alignment and structure |
|---|
| >1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} | Back alignment and structure |
|---|
| >3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A | Back alignment and structure |
|---|
| >1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A | Back alignment and structure |
|---|
| >2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} | Back alignment and structure |
|---|
| >1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* | Back alignment and structure |
|---|
| >2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 | Back alignment and structure |
|---|
| >3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* | Back alignment and structure |
|---|
| >1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 | Back alignment and structure |
|---|
| >1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A | Back alignment and structure |
|---|
| >3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C | Back alignment and structure |
|---|
| >1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* | Back alignment and structure |
|---|
| >3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A | Back alignment and structure |
|---|
| >2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A | Back alignment and structure |
|---|
| >2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* | Back alignment and structure |
|---|
| >1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* | Back alignment and structure |
|---|
| >1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} | Back alignment and structure |
|---|
| >2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* | Back alignment and structure |
|---|
| >3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* | Back alignment and structure |
|---|
| >3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} | Back alignment and structure |
|---|
| >3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* | Back alignment and structure |
|---|
| >3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} | Back alignment and structure |
|---|
| >2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
| >2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 | Back alignment and structure |
|---|
| >2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* | Back alignment and structure |
|---|
| >1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* | Back alignment and structure |
|---|
| >3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* | Back alignment and structure |
|---|
| >2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
| >2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} | Back alignment and structure |
|---|
| >1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* | Back alignment and structure |
|---|
| >2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A | Back alignment and structure |
|---|
| >1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* | Back alignment and structure |
|---|
| >3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* | Back alignment and structure |
|---|
| >4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A* | Back alignment and structure |
|---|
| >4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* | Back alignment and structure |
|---|
| >4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* | Back alignment and structure |
|---|
| >1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* | Back alignment and structure |
|---|
| >1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 | Back alignment and structure |
|---|
| >3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 | Back alignment and structure |
|---|
| >3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A | Back alignment and structure |
|---|
| >3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4} | Back alignment and structure |
|---|
| >2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 | Back alignment and structure |
|---|
| >2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* | Back alignment and structure |
|---|
| >1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* | Back alignment and structure |
|---|
| >1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A* | Back alignment and structure |
|---|
| >2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A | Back alignment and structure |
|---|
| >3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* | Back alignment and structure |
|---|
| >3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* | Back alignment and structure |
|---|
| >3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} | Back alignment and structure |
|---|
| >2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A | Back alignment and structure |
|---|
| >3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* | Back alignment and structure |
|---|
| >1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 | Back alignment and structure |
|---|
| >2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A | Back alignment and structure |
|---|
| >3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A | Back alignment and structure |
|---|
| >3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} | Back alignment and structure |
|---|
| >4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} | Back alignment and structure |
|---|
| >1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 | Back alignment and structure |
|---|
| >3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* | Back alignment and structure |
|---|
| >3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4} | Back alignment and structure |
|---|
| >1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A | Back alignment and structure |
|---|
| >3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
| >3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A* | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A | Back alignment and structure |
|---|
| >3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A | Back alignment and structure |
|---|
| >1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A | Back alignment and structure |
|---|
| >3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* | Back alignment and structure |
|---|
| >1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* | Back alignment and structure |
|---|
| >2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A | Back alignment and structure |
|---|
| >2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} | Back alignment and structure |
|---|
| >1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 | Back alignment and structure |
|---|
| >2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* | Back alignment and structure |
|---|
| >1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} | Back alignment and structure |
|---|
| >1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* | Back alignment and structure |
|---|
| >2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
| >1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 | Back alignment and structure |
|---|
| >3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A | Back alignment and structure |
|---|
| >3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A | Back alignment and structure |
|---|
| >2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} | Back alignment and structure |
|---|
| >4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* | Back alignment and structure |
|---|
| >3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} | Back alignment and structure |
|---|
| >2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* | Back alignment and structure |
|---|
| >2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 | Back alignment and structure |
|---|
| >2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* | Back alignment and structure |
|---|
| >1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 | Back alignment and structure |
|---|
| >1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* | Back alignment and structure |
|---|
| >3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A | Back alignment and structure |
|---|
| >1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* | Back alignment and structure |
|---|
| >1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 | Back alignment and structure |
|---|
| >3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A* | Back alignment and structure |
|---|
| >2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* | Back alignment and structure |
|---|
| >2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
| >3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} | Back alignment and structure |
|---|
| >2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A | Back alignment and structure |
|---|
| >3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni} | Back alignment and structure |
|---|
| >2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* | Back alignment and structure |
|---|
| >2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 | Back alignment and structure |
|---|
| >1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* | Back alignment and structure |
|---|
| >3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* | Back alignment and structure |
|---|
| >3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A* | Back alignment and structure |
|---|
| >1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 | Back alignment and structure |
|---|
| >3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* | Back alignment and structure |
|---|
| >1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A | Back alignment and structure |
|---|
| >2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A | Back alignment and structure |
|---|
| >4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} | Back alignment and structure |
|---|
| >1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* | Back alignment and structure |
|---|
| >1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* | Back alignment and structure |
|---|
| >2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* | Back alignment and structure |
|---|
| >1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* | Back alignment and structure |
|---|
| >2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} | Back alignment and structure |
|---|
| >3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* | Back alignment and structure |
|---|
| >1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* | Back alignment and structure |
|---|
| >1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* | Back alignment and structure |
|---|
| >3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} | Back alignment and structure |
|---|
| >1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* | Back alignment and structure |
|---|
| >1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 | Back alignment and structure |
|---|
| >3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} | Back alignment and structure |
|---|
| >1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* | Back alignment and structure |
|---|
| >3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* | Back alignment and structure |
|---|
| >1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* | Back alignment and structure |
|---|
| >1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 | Back alignment and structure |
|---|
| >3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
| >3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* | Back alignment and structure |
|---|
| >3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A | Back alignment and structure |
|---|
| >3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A | Back alignment and structure |
|---|
| >3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* | Back alignment and structure |
|---|
| >2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* | Back alignment and structure |
|---|
| >2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* | Back alignment and structure |
|---|
| >3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* | Back alignment and structure |
|---|
| >1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* | Back alignment and structure |
|---|
| >3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A | Back alignment and structure |
|---|
| >2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* | Back alignment and structure |
|---|
| >4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} | Back alignment and structure |
|---|
| >2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 | Back alignment and structure |
|---|
| >2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* | Back alignment and structure |
|---|
| >2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A | Back alignment and structure |
|---|
| >2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} | Back alignment and structure |
|---|
| >2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A | Back alignment and structure |
|---|
| >2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* | Back alignment and structure |
|---|
| >1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* | Back alignment and structure |
|---|
| >2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} | Back alignment and structure |
|---|
| >1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* | Back alignment and structure |
|---|
| >2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* | Back alignment and structure |
|---|
| >1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* | Back alignment and structure |
|---|
| >3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A | Back alignment and structure |
|---|
| >1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* | Back alignment and structure |
|---|
| >1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} | Back alignment and structure |
|---|
| >2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* | Back alignment and structure |
|---|
| >3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} | Back alignment and structure |
|---|
| >3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A* | Back alignment and structure |
|---|
| >1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* | Back alignment and structure |
|---|
| >2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* | Back alignment and structure |
|---|
| >1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* | Back alignment and structure |
|---|
| >3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X* | Back alignment and structure |
|---|
| >3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* | Back alignment and structure |
|---|
| >3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* | Back alignment and structure |
|---|
| >1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* | Back alignment and structure |
|---|
| >2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
| >3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* | Back alignment and structure |
|---|
| >1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} | Back alignment and structure |
|---|
| >2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} | Back alignment and structure |
|---|
| >2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* | Back alignment and structure |
|---|
| >4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* | Back alignment and structure |
|---|
| >2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} | Back alignment and structure |
|---|
| >3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A* | Back alignment and structure |
|---|
| >2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A | Back alignment and structure |
|---|
| >1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 | Back alignment and structure |
|---|
| >3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A | Back alignment and structure |
|---|
| >2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A | Back alignment and structure |
|---|
| >3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* | Back alignment and structure |
|---|
| >1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* | Back alignment and structure |
|---|
| >2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A | Back alignment and structure |
|---|
| >1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A* | Back alignment and structure |
|---|
| >3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A | Back alignment and structure |
|---|
| >1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
| >2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* | Back alignment and structure |
|---|
| >1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A | Back alignment and structure |
|---|
| >1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B* | Back alignment and structure |
|---|
| >1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14 | Back alignment and structure |
|---|
| >4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A | Back alignment and structure |
|---|
| >2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* | Back alignment and structure |
|---|
| >2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A | Back alignment and structure |
|---|
| >2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A | Back alignment and structure |
|---|
| >1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1 | Back alignment and structure |
|---|
| >2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A | Back alignment and structure |
|---|
| >3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A* | Back alignment and structure |
|---|
| >2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A* | Back alignment and structure |
|---|
| >2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C | Back alignment and structure |
|---|
| >1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11 | Back alignment and structure |
|---|
| >2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D* | Back alignment and structure |
|---|
| >2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A* | Back alignment and structure |
|---|
| >3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4} | Back alignment and structure |
|---|
| >2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* | Back alignment and structure |
|---|
| >1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A | Back alignment and structure |
|---|
| >1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* | Back alignment and structure |
|---|
| >2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A* | Back alignment and structure |
|---|
| >2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A | Back alignment and structure |
|---|
| >3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} | Back alignment and structure |
|---|
| >1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A* | Back alignment and structure |
|---|
| >2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A | Back alignment and structure |
|---|
| >3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* | Back alignment and structure |
|---|
| >3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* | Back alignment and structure |
|---|
| >2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A | Back alignment and structure |
|---|
| >3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} | Back alignment and structure |
|---|
| >3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} | Back alignment and structure |
|---|
| >2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* | Back alignment and structure |
|---|
| >2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D* | Back alignment and structure |
|---|
| >2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* | Back alignment and structure |
|---|
| >1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* | Back alignment and structure |
|---|
| >3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A | Back alignment and structure |
|---|
| >1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 | Back alignment and structure |
|---|
| >1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A | Back alignment and structure |
|---|
| >3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12 | Back alignment and structure |
|---|
| >2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
| >1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A | Back alignment and structure |
|---|
| >1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* | Back alignment and structure |
|---|
| >2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 | Back alignment and structure |
|---|
| >1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* | Back alignment and structure |
|---|
| >3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* | Back alignment and structure |
|---|
| >2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} | Back alignment and structure |
|---|
| >4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* | Back alignment and structure |
|---|
| >1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 | Back alignment and structure |
|---|
| >3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* | Back alignment and structure |
|---|
| >2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A* | Back alignment and structure |
|---|
| >1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8 | Back alignment and structure |
|---|
| >1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* | Back alignment and structure |
|---|
| >2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* | Back alignment and structure |
|---|
| >3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
| >3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
| >4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} | Back alignment and structure |
|---|
| >3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C | Back alignment and structure |
|---|
| >1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A | Back alignment and structure |
|---|
| >1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* | Back alignment and structure |
|---|
| >2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* | Back alignment and structure |
|---|
| >1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A* | Back alignment and structure |
|---|
| >1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 | Back alignment and structure |
|---|
| >2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* | Back alignment and structure |
|---|
| >2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A* | Back alignment and structure |
|---|
| >1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A* | Back alignment and structure |
|---|
| >2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
| >2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
| >3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* | Back alignment and structure |
|---|
| >2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B* | Back alignment and structure |
|---|
| >2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
| >2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* | Back alignment and structure |
|---|
| >3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1} | Back alignment and structure |
|---|
| >1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* | Back alignment and structure |
|---|
| >4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A | Back alignment and structure |
|---|
| >2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ... | Back alignment and structure |
|---|
| >3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} | Back alignment and structure |
|---|
| >4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* | Back alignment and structure |
|---|
| >2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R* | Back alignment and structure |
|---|
| >1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B* | Back alignment and structure |
|---|
| >1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 | Back alignment and structure |
|---|
| >2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1614 | ||||
| d1qvra2 | 387 | c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus | 8e-04 | |
| d1a5ta2 | 207 | c.37.1.20 (A:1-207) delta prime subunit of DNA pol | 0.003 |
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpB, AAA+ modules species: Thermus thermophilus [TaxId: 274]
Score = 41.2 bits (96), Expect = 8e-04
Identities = 69/388 (17%), Positives = 140/388 (36%), Gaps = 61/388 (15%)
Query: 740 DEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVA--FMNG-------------LS 784
DE + V++I + R+ + + +LIG G GKT + +A + G L
Sbjct: 28 DEEIRRVIQI--LLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQ 85
Query: 785 VFQIRAHNKYTGADFDEDLRTVLRRSGCKNEKIAFLLDESNVLESGFLER-------MNT 837
+ + A KY G + + + E I F+ + V+ +G E +
Sbjct: 86 MGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKP 145
Query: 838 LLANGEIP--GLFEGDEYTTLMTQCKEGAQREGLMLDSNEELYKWFTQQVMKNLHVVFTM 895
LA GE+ G DEY + K+ A L + F + V T+
Sbjct: 146 ALARGELRLIGATTLDEYREIE---KDPA------------LERRFQPVYVDEPTVEETI 190
Query: 896 NPSSEGLKDRAATSPALFNRCVLNWFGDWSDTALYQVAKEFTSKIDLDGPQNWKAPDFFP 955
+ GLK+ + ++ SD+A+ A + + + KA D
Sbjct: 191 S-ILRGLKE----------KYEVHHGVRISDSAIIAAA-TLSHRYITERRLPDKAIDLID 238
Query: 956 SVCSLVSTTPSHRDSVINACVYVHQTLHKANARLSKRGSRTMAITPRHYLDFINHFVKLY 1015
+ + I+A L L K L I +
Sbjct: 239 EAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQ----ERLKAIEAEIAKL 294
Query: 1016 REKCSELEEQQLHLNVGLGKIAETVEQVEEMQKSL--AVKSQELQSKNEAANLKLKEMIK 1073
E+ ++L + L K+ E +++E+++ + A + +L E +L ++
Sbjct: 295 TEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEA 354
Query: 1074 DQQEAEKRKVQSQDIQAEIEKQTVEIAQ 1101
+ + ++ ++ ++ E+ ++ +IA+
Sbjct: 355 EVEALSEKLRGARFVRLEVTEE--DIAE 380
|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Length = 207 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1614 | |||
| d1r6bx2 | 268 | ClpA, an Hsp100 chaperone, AAA+ modules {Escherich | 99.08 | |
| d1jbka_ | 195 | ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} | 99.07 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 99.06 | |
| d1ixza_ | 247 | AAA domain of cell division protein FtsH {Thermus | 99.0 | |
| d1ofha_ | 309 | HslU {Haemophilus influenzae [TaxId: 727]} | 98.99 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 98.99 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 98.93 | |
| d1g8pa_ | 333 | ATPase subunit of magnesium chelatase, BchI {Rhodo | 98.87 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 98.87 | |
| d1in4a2 | 238 | Holliday junction helicase RuvB {Thermotoga mariti | 98.87 | |
| d1r6bx3 | 315 | ClpA, an Hsp100 chaperone, AAA+ modules {Escherich | 98.86 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 98.83 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 98.83 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 98.79 | |
| d1qvra3 | 315 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 98.78 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 98.73 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 98.66 | |
| d1ny5a2 | 247 | Transcriptional activator sigm54 (NtrC1), C-termin | 98.66 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 98.61 | |
| d1ixsb2 | 239 | Holliday junction helicase RuvB {Thermus thermophi | 98.6 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 98.59 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 98.56 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 98.54 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 98.48 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 98.26 | |
| d1w44a_ | 321 | NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} | 98.25 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 98.15 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 98.07 | |
| d1ixza_ | 247 | AAA domain of cell division protein FtsH {Thermus | 98.06 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 98.03 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 98.0 | |
| d1jbka_ | 195 | ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} | 97.99 | |
| d1r6bx3 | 315 | ClpA, an Hsp100 chaperone, AAA+ modules {Escherich | 97.91 | |
| d1r6bx2 | 268 | ClpA, an Hsp100 chaperone, AAA+ modules {Escherich | 97.86 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 97.82 | |
| d2gnoa2 | 198 | gamma subunit of DNA polymerase III, N-domain {The | 97.82 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 97.78 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 97.69 | |
| d1qvra3 | 315 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 97.68 | |
| d1in4a2 | 238 | Holliday junction helicase RuvB {Thermotoga mariti | 97.58 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 97.58 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 97.58 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 97.57 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 97.51 | |
| d1g8pa_ | 333 | ATPase subunit of magnesium chelatase, BchI {Rhodo | 97.4 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 97.39 | |
| d1ixsb2 | 239 | Holliday junction helicase RuvB {Thermus thermophi | 97.37 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 97.36 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 97.33 | |
| d1g41a_ | 443 | HslU {Haemophilus influenzae [TaxId: 727]} | 97.33 | |
| d1ofha_ | 309 | HslU {Haemophilus influenzae [TaxId: 727]} | 97.31 | |
| d2gnoa2 | 198 | gamma subunit of DNA polymerase III, N-domain {The | 97.22 | |
| d1w44a_ | 321 | NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} | 97.22 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 97.17 | |
| d2fnaa2 | 283 | Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ | 96.96 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 96.9 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 96.89 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 96.88 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 96.28 | |
| d1tuea_ | 205 | Replication protein E1 helicase domain {Human papi | 96.24 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 96.23 | |
| d1g41a_ | 443 | HslU {Haemophilus influenzae [TaxId: 727]} | 96.17 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 96.07 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 96.03 | |
| d1yj5a2 | 172 | 5' polynucleotide kinase-3' phosphatase, C-termina | 95.9 | |
| d2a5yb3 | 277 | CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI | 95.9 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 95.63 | |
| d1nn5a_ | 209 | Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 | 95.59 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 95.56 | |
| d1zp6a1 | 176 | Hypothetical protein Atu3015 {Agrobacterium tumefa | 95.23 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 95.22 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 95.21 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 95.18 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 95.17 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 95.15 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 95.07 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 95.06 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 95.03 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 95.02 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 95.01 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 94.96 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 94.94 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 94.86 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 94.85 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 94.82 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 94.82 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 94.8 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 94.74 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 94.67 | |
| d1s3ga1 | 182 | Adenylate kinase {Bacillus globisporus [TaxId: 145 | 94.64 | |
| d1zina1 | 182 | Adenylate kinase {Bacillus stearothermophilus [Tax | 94.6 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 94.5 | |
| d2iyva1 | 165 | Shikimate kinase (AroK) {Mycobacterium tuberculosi | 94.48 | |
| d1ak2a1 | 190 | Adenylate kinase {Cow (Bos taurus), mitochondrial | 94.46 | |
| d2fnaa2 | 283 | Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ | 94.43 | |
| d2iyva1 | 165 | Shikimate kinase (AroK) {Mycobacterium tuberculosi | 94.42 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 94.4 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 94.31 | |
| d1teva_ | 194 | UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] | 94.26 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 94.24 | |
| d1e4va1 | 179 | Adenylate kinase {Escherichia coli [TaxId: 562]} | 94.23 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 94.22 | |
| d1ak2a1 | 190 | Adenylate kinase {Cow (Bos taurus), mitochondrial | 94.21 | |
| d1ukza_ | 196 | Uridylate kinase {Baker's yeast (Saccharomyces cer | 94.1 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 94.09 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 94.07 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 94.06 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 94.03 | |
| d1akya1 | 180 | Adenylate kinase {Baker's yeast (Saccharomyces cer | 93.94 | |
| d1u0ja_ | 267 | Rep 40 protein helicase domain {Adeno-associated v | 93.93 | |
| d2cdna1 | 181 | Adenylate kinase {Mycobacterium tuberculosis [TaxI | 93.89 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 93.87 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 93.78 | |
| d1zp6a1 | 176 | Hypothetical protein Atu3015 {Agrobacterium tumefa | 93.77 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 93.77 | |
| d2a5yb3 | 277 | CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI | 93.75 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 93.69 | |
| d3adka_ | 194 | Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | 93.6 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 93.59 | |
| d2ak3a1 | 189 | Adenylate kinase {Cow (Bos taurus), mitochondrial | 93.56 | |
| d1okkd2 | 207 | GTPase domain of the signal recognition particle r | 93.55 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 93.48 | |
| d1kgda_ | 178 | Guanylate kinase-like domain of Cask {Human (Homo | 93.41 | |
| d1vmaa2 | 213 | GTPase domain of the signal recognition particle r | 93.38 | |
| d1zina1 | 182 | Adenylate kinase {Bacillus stearothermophilus [Tax | 93.32 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 93.31 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 93.28 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 93.27 | |
| d1teva_ | 194 | UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] | 93.24 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 93.24 | |
| d1kgda_ | 178 | Guanylate kinase-like domain of Cask {Human (Homo | 93.23 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 92.96 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 92.96 | |
| d1s3ga1 | 182 | Adenylate kinase {Bacillus globisporus [TaxId: 145 | 92.94 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 92.87 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 92.82 | |
| d1ukza_ | 196 | Uridylate kinase {Baker's yeast (Saccharomyces cer | 92.7 | |
| d2ak3a1 | 189 | Adenylate kinase {Cow (Bos taurus), mitochondrial | 92.62 | |
| d2cdna1 | 181 | Adenylate kinase {Mycobacterium tuberculosis [TaxI | 92.62 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 92.62 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 92.52 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 92.38 | |
| d1e4va1 | 179 | Adenylate kinase {Escherichia coli [TaxId: 562]} | 92.3 | |
| d1akya1 | 180 | Adenylate kinase {Baker's yeast (Saccharomyces cer | 92.21 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 92.2 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 92.12 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 92.11 | |
| d1ny5a2 | 247 | Transcriptional activator sigm54 (NtrC1), C-termin | 92.07 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 91.94 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 91.9 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 91.85 | |
| d3adka_ | 194 | Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | 91.83 | |
| d1s96a_ | 205 | Guanylate kinase {Escherichia coli [TaxId: 562]} | 91.82 | |
| d1s96a_ | 205 | Guanylate kinase {Escherichia coli [TaxId: 562]} | 91.81 | |
| d1yj5a2 | 172 | 5' polynucleotide kinase-3' phosphatase, C-termina | 91.79 | |
| d3d31a2 | 229 | Sulfate/molybdate ABC transporter, ATP-binding pro | 91.68 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 91.64 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 91.61 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 91.59 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 91.57 | |
| d1f6ba_ | 186 | SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: | 91.56 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 91.55 | |
| d2p67a1 | 327 | LAO/AO transport system kinase ArgK {Escherichia c | 91.48 | |
| d1u0ja_ | 267 | Rep 40 protein helicase domain {Adeno-associated v | 91.41 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 91.37 | |
| d1vmaa2 | 213 | GTPase domain of the signal recognition particle r | 91.35 | |
| d1r8sa_ | 160 | ADP-ribosylation factor {Human (Homo sapiens), ARF | 91.33 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 91.25 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 91.23 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 91.19 | |
| d1tf7a2 | 242 | Circadian clock protein KaiC {Synechococcus sp. st | 91.18 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 91.15 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 91.05 | |
| d1ckea_ | 225 | CMP kinase {Escherichia coli [TaxId: 562]} | 90.94 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 90.92 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 90.79 | |
| d1okkd2 | 207 | GTPase domain of the signal recognition particle r | 90.75 | |
| d1q3ta_ | 223 | CMP kinase {Streptococcus pneumoniae [TaxId: 1313] | 90.73 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 90.66 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 90.46 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 90.4 | |
| d1pzna2 | 254 | DNA repair protein Rad51, catalytic domain {Archae | 90.2 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 90.12 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 90.05 | |
| d1r8sa_ | 160 | ADP-ribosylation factor {Human (Homo sapiens), ARF | 90.01 | |
| d1ls1a2 | 207 | GTPase domain of the signal sequence recognition p | 89.94 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 89.88 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 89.61 | |
| d1yrba1 | 244 | ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss | 89.55 | |
| d1ls1a2 | 207 | GTPase domain of the signal sequence recognition p | 89.55 | |
| d1upta_ | 169 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 89.54 | |
| d1yksa1 | 140 | YFV helicase domain {Yellow fever virus [TaxId: 11 | 89.41 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 89.34 | |
| d2qm8a1 | 323 | Metallochaperone MeaB {Methylobacterium extorquens | 89.2 | |
| d1nrjb_ | 209 | Signal recognition particle receptor beta-subunit | 89.02 | |
| d1szpa2 | 251 | DNA repair protein Rad51, catalytic domain {Baker' | 89.0 | |
| d1yrba1 | 244 | ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss | 88.88 | |
| d1sq5a_ | 308 | Pantothenate kinase PanK {Escherichia coli [TaxId: | 88.86 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 88.84 | |
| d2p6ra3 | 202 | Hel308 helicase {Archaeoglobus fulgidus [TaxId: 22 | 88.75 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 88.7 | |
| d1l7vc_ | 231 | ABC transporter involved in vitamin B12 uptake, Bt | 88.6 | |
| d1b0ua_ | 258 | ATP-binding subunit of the histidine permease {Sal | 88.52 | |
| d1ksha_ | 165 | ADP-ribosylation factor {Mouse (Mus musculus), ARL | 88.42 | |
| d2qtvb1 | 166 | SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 88.36 | |
| d3raba_ | 169 | Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} | 88.35 | |
| d2a5ja1 | 173 | Rab2b {Human (Homo sapiens) [TaxId: 9606]} | 88.31 | |
| d1svia_ | 195 | Probable GTPase EngB {Bacillus subtilis [TaxId: 14 | 88.24 | |
| d2fh5b1 | 207 | Signal recognition particle receptor beta-subunit | 88.11 | |
| d2cxxa1 | 184 | GTP-binding protein engB {Pyrococcus horikoshii [T | 88.03 | |
| d1odfa_ | 286 | Hypothetical protein Ygr205W {Baker's yeast (Sacch | 87.98 | |
| d2fh5b1 | 207 | Signal recognition particle receptor beta-subunit | 87.96 | |
| d1upta_ | 169 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 87.95 | |
| d1z2aa1 | 164 | Rab23 {Mouse (Mus musculus) [TaxId: 10090]} | 87.89 | |
| d2f7sa1 | 186 | Rab27b {Human (Homo sapiens) [TaxId: 9606]} | 87.8 | |
| d1z2aa1 | 164 | Rab23 {Mouse (Mus musculus) [TaxId: 10090]} | 87.79 | |
| d2atva1 | 168 | Ras-like estrogen-regulated growth inhibitor, RERG | 87.78 | |
| d1zj6a1 | 177 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 87.73 | |
| d2a5ja1 | 173 | Rab2b {Human (Homo sapiens) [TaxId: 9606]} | 87.52 | |
| d1kaoa_ | 167 | Rap2a {Human (Homo sapiens) [TaxId: 9606]} | 87.51 | |
| d2gj8a1 | 161 | Probable tRNA modification GTPase TrmE (MnmE), G d | 87.5 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 87.44 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 87.42 | |
| d1ji0a_ | 240 | Branched chain aminoacid ABC transporter {Thermoto | 87.32 | |
| d1htwa_ | 158 | Hypothetical protein HI0065 {Haemophilus influenza | 87.26 | |
| d2qtvb1 | 166 | SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 87.2 | |
| d1mkya1 | 171 | Probable GTPase Der, N-terminal and middle domains | 87.06 | |
| d1ckea_ | 225 | CMP kinase {Escherichia coli [TaxId: 562]} | 87.01 | |
| d1z0fa1 | 166 | Rab14 {Human (Homo sapiens) [TaxId: 9606]} | 86.99 | |
| d2f9la1 | 175 | Rab11b {Human (Homo sapiens) [TaxId: 9606]} | 86.95 | |
| d1z08a1 | 167 | Rab21 {Human (Homo sapiens) [TaxId: 9606]} | 86.9 | |
| d4tmka_ | 210 | Thymidylate kinase {Escherichia coli [TaxId: 562]} | 86.84 | |
| d1h65a_ | 257 | Chloroplast protein translocon GTPase Toc34 {Garde | 86.75 | |
| d1zd9a1 | 164 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 86.75 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 86.72 | |
| d3raba_ | 169 | Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} | 86.53 | |
| d1ksha_ | 165 | ADP-ribosylation factor {Mouse (Mus musculus), ARL | 86.5 | |
| d1kmqa_ | 177 | RhoA {Human (Homo sapiens) [TaxId: 9606]} | 86.46 | |
| d1g16a_ | 166 | Rab-related protein Sec4 {Baker's yeast (Saccharom | 86.44 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 86.43 | |
| d2atva1 | 168 | Ras-like estrogen-regulated growth inhibitor, RERG | 86.43 | |
| d1r2qa_ | 170 | Rab5a {Human (Homo sapiens) [TaxId: 9606]} | 86.4 | |
| d2erya1 | 171 | r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | 86.39 | |
| d1zj6a1 | 177 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 86.35 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 86.34 | |
| d1ky3a_ | 175 | Rab-related protein ypt7p {Baker's yeast (Saccharo | 86.32 | |
| d1q3ta_ | 223 | CMP kinase {Streptococcus pneumoniae [TaxId: 1313] | 86.3 | |
| d1mo6a1 | 269 | RecA protein, ATPase-domain {Mycobacterium tubercu | 86.27 | |
| d1ctqa_ | 166 | cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 | 86.27 | |
| d1n0wa_ | 242 | DNA repair protein Rad51, catalytic domain {Human | 86.27 | |
| d1knxa2 | 177 | HPr kinase HprK C-terminal domain {Mycoplasma pneu | 86.27 | |
| d1u0la2 | 225 | Probable GTPase EngC (YjeQ), C-terminal domain {Th | 86.25 | |
| d2erxa1 | 171 | di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | 86.21 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 86.2 | |
| d2erya1 | 171 | r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | 86.2 | |
| d2fn4a1 | 173 | r-Ras {Human (Homo sapiens) [TaxId: 9606]} | 86.19 | |
| d1kaoa_ | 167 | Rap2a {Human (Homo sapiens) [TaxId: 9606]} | 86.17 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 86.07 | |
| d1z06a1 | 165 | Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} | 86.03 | |
| d2ew1a1 | 171 | Rab30 {Human (Homo sapiens) [TaxId: 9606]} | 86.02 | |
| d1xtqa1 | 167 | GTP-binding protein RheB {Human (Homo sapiens) [Ta | 85.99 | |
| d1f6ba_ | 186 | SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: | 85.92 | |
| d2gj8a1 | 161 | Probable tRNA modification GTPase TrmE (MnmE), G d | 85.83 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 85.81 | |
| d1uaaa1 | 306 | DEXX box DNA helicase {Escherichia coli, RepD [Tax | 85.78 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 85.78 | |
| d1wf3a1 | 178 | GTPase Era, N-terminal domain {Thermus thermophilu | 85.76 | |
| d2f7sa1 | 186 | Rab27b {Human (Homo sapiens) [TaxId: 9606]} | 85.74 | |
| d1vpla_ | 238 | Putative ABC transporter TM0544 {Thermotoga mariti | 85.72 | |
| d1z08a1 | 167 | Rab21 {Human (Homo sapiens) [TaxId: 9606]} | 85.71 | |
| d2ew1a1 | 171 | Rab30 {Human (Homo sapiens) [TaxId: 9606]} | 85.65 | |
| d1tuea_ | 205 | Replication protein E1 helicase domain {Human papi | 85.63 | |
| d2fn4a1 | 173 | r-Ras {Human (Homo sapiens) [TaxId: 9606]} | 85.54 | |
| d1wmsa_ | 174 | Rab9a {Human (Homo sapiens) [TaxId: 9606]} | 85.52 | |
| d1ek0a_ | 170 | Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T | 85.45 | |
| d1ctqa_ | 166 | cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 | 85.44 | |
| d1wmsa_ | 174 | Rab9a {Human (Homo sapiens) [TaxId: 9606]} | 85.42 | |
| d1z0fa1 | 166 | Rab14 {Human (Homo sapiens) [TaxId: 9606]} | 85.41 | |
| d1yzqa1 | 164 | Rab6 {Human (Homo sapiens) [TaxId: 9606]} | 85.39 | |
| d2f9la1 | 175 | Rab11b {Human (Homo sapiens) [TaxId: 9606]} | 85.38 | |
| d1g6ha_ | 254 | MJ1267 {Archaeon Methanococcus jannaschii [TaxId: | 85.37 | |
| d1c1ya_ | 167 | Rap1A {Human (Homo sapiens) [TaxId: 9606]} | 85.36 | |
| d1z06a1 | 165 | Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} | 85.32 | |
| d1yksa1 | 140 | YFV helicase domain {Yellow fever virus [TaxId: 11 | 85.32 | |
| d1xtqa1 | 167 | GTP-binding protein RheB {Human (Homo sapiens) [Ta | 85.3 | |
| d1r2qa_ | 170 | Rab5a {Human (Homo sapiens) [TaxId: 9606]} | 85.22 | |
| d2vp4a1 | 197 | Deoxyribonucleoside kinase {Fruit fly (Drosophila | 85.2 | |
| d1zd9a1 | 164 | ADP-ribosylation factor {Human (Homo sapiens), ARL | 85.18 | |
| d2erxa1 | 171 | di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | 85.16 | |
| d2bcgy1 | 194 | GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi | 85.15 | |
| d1ko7a2 | 169 | HPr kinase HprK C-terminal domain {Staphylococcus | 85.1 | |
| d1gsia_ | 208 | Thymidylate kinase {Mycobacterium tuberculosis [Ta | 85.02 | |
| d2g6ba1 | 170 | Rab26 {Human (Homo sapiens) [TaxId: 9606]} | 84.98 | |
| d1ky3a_ | 175 | Rab-related protein ypt7p {Baker's yeast (Saccharo | 84.87 | |
| d1z0ja1 | 167 | Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} | 84.85 | |
| d1kmqa_ | 177 | RhoA {Human (Homo sapiens) [TaxId: 9606]} | 84.82 | |
| d1mh1a_ | 183 | Rac {Human (Homo sapiens) [TaxId: 9606]} | 84.82 | |
| d1u0la2 | 225 | Probable GTPase EngC (YjeQ), C-terminal domain {Th | 84.8 | |
| d1nrjb_ | 209 | Signal recognition particle receptor beta-subunit | 84.78 | |
| d1tf7a2 | 242 | Circadian clock protein KaiC {Synechococcus sp. st | 84.74 | |
| d1m7ba_ | 179 | RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} | 84.7 | |
| d1fzqa_ | 176 | ADP-ribosylation factor {Mouse (Mus musculus), ARL | 84.65 | |
| d1vg8a_ | 184 | Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} | 84.63 | |
| d1vg8a_ | 184 | Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} | 84.62 | |
| d2jdia3 | 285 | Central domain of alpha subunit of F1 ATP synthase | 84.61 | |
| d1pjra1 | 318 | DEXX box DNA helicase {Bacillus stearothermophilus | 84.59 | |
| d1xp8a1 | 268 | RecA protein, ATPase-domain {Deinococcus radiodura | 84.55 | |
| d1mh1a_ | 183 | Rac {Human (Homo sapiens) [TaxId: 9606]} | 84.53 | |
| d1yzqa1 | 164 | Rab6 {Human (Homo sapiens) [TaxId: 9606]} | 84.53 | |
| d2bmea1 | 174 | Rab4a {Human (Homo sapiens) [TaxId: 9606]} | 84.52 | |
| d1uf9a_ | 191 | Dephospho-CoA kinase {Thermus thermophilus [TaxId: | 84.41 | |
| d1e9ra_ | 433 | Bacterial conjugative coupling protein TrwB {Esche | 84.37 | |
| d1g16a_ | 166 | Rab-related protein Sec4 {Baker's yeast (Saccharom | 84.35 | |
| d2bmea1 | 174 | Rab4a {Human (Homo sapiens) [TaxId: 9606]} | 84.31 | |
| d1u8za_ | 168 | Ras-related protein RalA {Cotton-top tamarin (Sagu | 84.28 | |
| g1f2t.1 | 292 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 84.21 | |
| d1pjra1 | 318 | DEXX box DNA helicase {Bacillus stearothermophilus | 84.14 | |
| d1x1ra1 | 169 | Ras-related protein M-Ras (XRas) {Mouse (Mus muscu | 84.04 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 83.92 | |
| d2gjsa1 | 168 | Rad {Human (Homo sapiens) [TaxId: 9606]} | 83.85 | |
| d2gjsa1 | 168 | Rad {Human (Homo sapiens) [TaxId: 9606]} | 83.84 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 83.78 | |
| d1u8za_ | 168 | Ras-related protein RalA {Cotton-top tamarin (Sagu | 83.76 | |
| d1v5wa_ | 258 | Meiotic recombination protein DMC1/LIM15 homolog { | 83.68 | |
| d1knxa2 | 177 | HPr kinase HprK C-terminal domain {Mycoplasma pneu | 83.68 | |
| d1mkya1 | 171 | Probable GTPase Der, N-terminal and middle domains | 83.58 | |
| d1egaa1 | 179 | GTPase Era, N-terminal domain {Escherichia coli [T | 83.56 | |
| d2fu5c1 | 173 | Rab8a {Mouse (Mus musculus) [TaxId: 10090]} | 83.47 | |
| d1xzpa2 | 160 | TrmE GTPase domain {Thermotoga maritima [TaxId: 23 | 83.45 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 83.43 | |
| d1x3sa1 | 177 | Rab18 {Human (Homo sapiens) [TaxId: 9606]} | 83.41 | |
| d1x3sa1 | 177 | Rab18 {Human (Homo sapiens) [TaxId: 9606]} | 83.39 | |
| d1lnza2 | 185 | Obg GTP-binding protein middle domain {Bacillus su | 83.3 | |
| d1htwa_ | 158 | Hypothetical protein HI0065 {Haemophilus influenza | 83.21 | |
| d2atxa1 | 185 | RhoQ {Human (Homo sapiens) [TaxId: 9606]} | 83.1 | |
| d1e0sa_ | 173 | ADP-ribosylation factor {Human (Homo sapiens), ARF | 83.08 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 83.08 | |
| d1ko7a2 | 169 | HPr kinase HprK C-terminal domain {Staphylococcus | 83.08 | |
| d2g3ya1 | 172 | GTP-binding protein GEM {Human (Homo sapiens) [Tax | 83.06 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 83.04 | |
| d1ek0a_ | 170 | Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T | 82.97 | |
| d1moza_ | 182 | ADP-ribosylation factor {Baker's yeast (Saccharomy | 82.95 | |
| d2g6ba1 | 170 | Rab26 {Human (Homo sapiens) [TaxId: 9606]} | 82.94 | |
| d1z0ja1 | 167 | Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} | 82.94 | |
| d1x1ra1 | 169 | Ras-related protein M-Ras (XRas) {Mouse (Mus muscu | 82.93 | |
| d1e0sa_ | 173 | ADP-ribosylation factor {Human (Homo sapiens), ARF | 82.92 | |
| d2atxa1 | 185 | RhoQ {Human (Homo sapiens) [TaxId: 9606]} | 82.89 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 82.87 | |
| d1fzqa_ | 176 | ADP-ribosylation factor {Mouse (Mus musculus), ARL | 82.81 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 82.73 | |
| d2ngra_ | 191 | CDC42 {Human (Homo sapiens) [TaxId: 9606]} | 82.7 | |
| d2g3ya1 | 172 | GTP-binding protein GEM {Human (Homo sapiens) [Tax | 82.69 | |
| d2cxxa1 | 184 | GTP-binding protein engB {Pyrococcus horikoshii [T | 82.53 | |
| d2bcgy1 | 194 | GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi | 82.53 | |
| d1c1ya_ | 167 | Rap1A {Human (Homo sapiens) [TaxId: 9606]} | 82.45 | |
| d1uaaa1 | 306 | DEXX box DNA helicase {Escherichia coli, RepD [Tax | 82.38 | |
| d1mkya2 | 186 | Probable GTPase Der, N-terminal and middle domains | 82.37 | |
| d1m7ba_ | 179 | RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} | 82.37 | |
| d2ngra_ | 191 | CDC42 {Human (Homo sapiens) [TaxId: 9606]} | 82.21 | |
| d1vhta_ | 208 | Dephospho-CoA kinase {Escherichia coli [TaxId: 562 | 82.21 | |
| d1wb9a2 | 234 | DNA repair protein MutS, the C-terminal domain {Es | 82.16 | |
| d2bmfa2 | 305 | Dengue virus helicase {Dengue virus type 2 [TaxId: | 82.15 | |
| d1a7ja_ | 288 | Phosphoribulokinase {Rhodobacter sphaeroides [TaxI | 81.85 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 81.67 | |
| d1u94a1 | 263 | RecA protein, ATPase-domain {Escherichia coli [Tax | 81.66 | |
| d1qhla_ | 222 | Cell division protein MukB {Escherichia coli [TaxI | 81.51 | |
| d1a1va1 | 136 | HCV helicase domain {Human hepatitis C virus (HCV) | 81.5 | |
| d1i2ma_ | 170 | Ran {Human (Homo sapiens) [TaxId: 9606]} | 81.42 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 81.37 | |
| d1wp9a1 | 200 | putative ATP-dependent RNA helicase PF2015 {Pyroco | 81.01 | |
| d1wf3a1 | 178 | GTPase Era, N-terminal domain {Thermus thermophilu | 81.0 | |
| d1udxa2 | 180 | Obg GTP-binding protein middle domain {Thermus the | 81.0 | |
| d2fu5c1 | 173 | Rab8a {Mouse (Mus musculus) [TaxId: 10090]} | 80.86 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 80.5 | |
| g1xew.1 | 329 | Smc head domain {Pyrococcus furiosus [TaxId: 2261] | 80.38 | |
| d1moza_ | 182 | ADP-ribosylation factor {Baker's yeast (Saccharomy | 80.34 |
| >d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpA, an Hsp100 chaperone, AAA+ modules species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=3.2e-11 Score=133.04 Aligned_cols=158 Identities=16% Similarity=0.160 Sum_probs=103.1
Q ss_pred HHHHHHHHHh-cCCCEEEecCCCCchHHHHHHHHhcC---------CCCceEEEEcccCCCHHHHHhHhhcccceeecCC
Q psy568 405 HESLLYTWLA-EHKPLVLCGPPGSGKTMTLLSALRAL---------PDMEVVSLNFSSATTPELLLKTFDHYCEYRKTPN 474 (1614)
Q Consensus 405 ~~~ll~~~l~-~~~~vLL~Gp~GtGKT~lv~~~~~~l---------~~~~~~~i~~s~~t~~~~l~~~~~~~~~~~~~~~ 474 (1614)
...++..+.. .+.|++|+||||+|||++++.+++.+ .+..++.++.++-.......+.++..+.
T Consensus 27 i~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~------ 100 (268)
T d1r6bx2 27 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK------ 100 (268)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHH------
T ss_pred HHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccCccchhHHHHHH------
Confidence 3345555553 45789999999999999999998643 3445666666544432222222222111
Q ss_pred ccccccccCCceEEEEeccCCCCCccc---cCcccHHHHHHHHHHcCceeeCCCCceEeecCeEEEEeecCCCCCCCCCC
Q psy568 475 GVILSPIQLGKWLVLFCDEINLPDMDK---YATQRVISFLRQLIEQRGFYRPADKQWVSLERIQCVGACNPPTDPGRKPL 551 (1614)
Q Consensus 475 g~~~~p~~~gk~~vlfiDdin~p~~d~---~g~q~~lelLrqlld~~~~~~~~~~~~~~~~~~~~iaa~n~~~~~g~~~l 551 (1614)
..+-.. .....+|+||||+|..-... -|+..+-.+|+.+++.| ++++||+++|....-..+-
T Consensus 101 ~i~~~~-~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg--------------~i~vIgatT~eey~~~~e~ 165 (268)
T d1r6bx2 101 ALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG--------------KIRVIGSTTYQEFSNIFEK 165 (268)
T ss_dssp HHHHHH-SSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSC--------------CCEEEEEECHHHHHCCCCC
T ss_pred HHHHHh-hccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhCC--------------CCeEEEeCCHHHHHHHHhh
Confidence 111111 12335899999999753221 12346777888877654 5889999998764344566
Q ss_pred cccccccccEEEecCCChhHHHHHHHHHHHhh
Q psy568 552 SHRFLRHVPVIYVDYPGETSLKQIYGTFSRAM 583 (1614)
Q Consensus 552 ~~r~~r~f~~i~i~~p~~~~l~~I~~~~~~~~ 583 (1614)
+++|.|||.+|.+++|+.++...|+..+...+
T Consensus 166 d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~ 197 (268)
T d1r6bx2 166 DRALARRFQKIDITEPSIEETVQIINGLKPKY 197 (268)
T ss_dssp TTSSGGGEEEEECCCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHhhhcccccCCCCHHHHHHHHHHhhHHH
Confidence 89999999999999999999999987765544
|
| >d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} | Back information, alignment and structure |
|---|
| >d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]} | Back information, alignment and structure |
|---|
| >d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
| >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} | Back information, alignment and structure |
|---|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
| >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
| >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} | Back information, alignment and structure |
|---|
| >d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} | Back information, alignment and structure |
|---|
| >d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} | Back information, alignment and structure |
|---|
| >d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} | Back information, alignment and structure |
|---|
| >d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} | Back information, alignment and structure |
|---|
| >d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
| >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} | Back information, alignment and structure |
|---|
| >d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} | Back information, alignment and structure |
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| >d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} | Back information, alignment and structure |
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| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
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| >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} | Back information, alignment and structure |
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| >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]} | Back information, alignment and structure |
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| >d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
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| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
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| >d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} | Back information, alignment and structure |
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| >d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
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| >d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} | Back information, alignment and structure |
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