Psyllid ID: psy5717


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MSERPMSERPSDRPMSERPSERPMSERPSLRPSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPSERLMSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPMSERPLKDRLKLFSPLRAVATVKISPNKLDVRTLILGRMEDIITKTKAVYTHSQRPSTDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTDQRPSMDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGLKNELKRLERKKMLRKPCSQS
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHccccccccHHHHHHHHHHcccccEEEEEEcccccEEcEEEEEccccHHHHHHHHHHHHHHccccccc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEEEEEccccccEEEEEccccccccEEEEEEEccccEEEcccccccccccccccEccccccccccccccccccEEEEEEEEccccccEEEEHHHHHHHccccccEEEEcHccccccEEcEEEEccccHHHHHHHHHHHHHHccccccc
mserpmserpsdrpmserpserpmserpslrpserpmserpserpmserpserpmserpserpmserpmserpserpmserpmserpserpserlmserpmserpserpmserpserpmserpserpmserpmserpserpmserpmserpserpmserplkdrlklfsplravatvkispnkldVRTLILGRMEDIITKTKAVythsqrpstdevnlccrdsvdcgrfsrhQSMAVRLSVECghtlrtdqrpsmdevnlccrdsvdcgrfsrhQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGLKNELKRLERkkmlrkpcsqs
mserpmserpsdrpmserpserpmserpslrpserpmserpserpmserpserpmserpserpmserpmserpserpmserpmserpserpserlmserpmserpserpmserpserpmserpserpmserpmserpserpmserpmserpserpmserplKDRLKLFSPlravatvkispnkldvrtLILGRMEDIITKtkavythsqrpstdevnlCCRDSVDCGRFSRHQSMAVRLSVECGHTlrtdqrpsmdevNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRtewraesidqqikgndteLKFTERQRGKMEcgfaisesnglknelkrlerkkmlrkpcsqs
MSERPMSERPSDRPMSERPSERPMSERPSLRPSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPSERLMSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPMSERPLKDRLKLFSPLRAVATVKISPNKLDVRTLILGRMEDIITKTKAVYTHSQRPSTDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTDQRPSMDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGlknelkrlerkkmlrkPCSQS
********************************************************************************************************************************************************************LKLFSPLRAVATVKISPNKLDVRTLILGRMEDIITKTKAVYTHSQRPSTDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRT*****MDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESI*****************************************************
**ERP*********************************************************************************************************************************************************************************************************************************************************************************VRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGL*************R*P****
***************************************************************************************************************************************************************PLKDRLKLFSPLRAVATVKISPNKLDVRTLILGRMEDIITKTKAV***********VNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTDQRPSMDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGLKNELKRLERKK*********
**************************************************************************************************************************************************************************************KLDVRTLILGRMEDIITKTKAVYTHSQRPSTDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTDQRPSMDEVN*CCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMECGFAISESNGLKNELKRLERKKMLR******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSERPMSERPSDRPMSERPSERPMSERPSLRPSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPSERLMSERPMSERPSERPMSERPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPMSERPLKDRLKLFSPLRAVATVKISPNKLDVRTLILGRMEDIITKTKAVYTHSQRPSTDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTDQRPSMDEVNLCCRDSVDCGRFSRHQSMAVRLSVECGHTLRTEWRAESIDQQIKGNDTELKFTERQRGKMExxxxxxxxxxxxxxxxxxxxxKMLRKPCSQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
Q24UI6 971 Translation initiation fa yes N/A 0.430 0.155 0.467 5e-29
Q5XGC9535 Serum response factor-bin yes N/A 0.327 0.214 0.559 1e-16
P53353349 Sperm acrosomal protein F N/A N/A 0.418 0.421 0.369 5e-09
P04922351 Circumsporozoite protein N/A N/A 0.356 0.356 0.217 2e-07
Q06990285 Acrosomal protein SP-10 O N/A N/A 0.598 0.736 0.262 6e-06
Q6H236 2387 Paternally-expressed gene yes N/A 0.452 0.066 0.213 2e-05
>sp|Q24UI6|IF2_DESHY Translation initiation factor IF-2 OS=Desulfitobacterium hafniense (strain Y51) GN=infB PE=3 SV=1 Back     alignment and function desciption
 Score =  128 bits (322), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 110/167 (65%), Gaps = 16/167 (9%)

Query: 2   SERPMSERP-SDRPMSERP-SERPMSERPSLRPSERPMSERP-SERPMSERP-SERPMSE 57
            +RPM +RP   RPM +RP  +RPM +RP     +RPM +RP  +RPM +RP  +RPM +
Sbjct: 163 GQRPMGDRPQGQRPMGDRPQGQRPMGDRPQ---GQRPMGDRPQGQRPMGDRPQGQRPMGD 219

Query: 58  RP-SERPMSERPMSERP-SERPMSERPMSERP-SERP-SERLMSERPMSERP-SERPMSE 112
           RP  +RPM +RP  +RP  +RP  +RPM +RP  +RP  +R   +RPM +RP  +RPM +
Sbjct: 220 RPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGD 279

Query: 113 RP-SERPMSERP-SERPMSERPMSERP-SERPMSERPMSERP-SERP 155
           RP  +RPM +RP  +RPM +RP  +RP  +RP  +RPM +RP  +RP
Sbjct: 280 RPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRP 326




One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
Desulfitobacterium hafniense (strain Y51) (taxid: 138119)
>sp|Q5XGC9|SRFB1_XENTR Serum response factor-binding protein 1 OS=Xenopus tropicalis GN=srfbp1 PE=2 SV=1 Back     alignment and function description
>sp|P53353|ASPX_VULVU Sperm acrosomal protein FSA-ACR.1 (Fragment) OS=Vulpes vulpes PE=2 SV=1 Back     alignment and function description
>sp|P04922|CSP_PLAKU Circumsporozoite protein OS=Plasmodium knowlesi (strain nuri) PE=3 SV=1 Back     alignment and function description
>sp|Q06990|ASPX_PAPHA Acrosomal protein SP-10 OS=Papio hamadryas GN=ACRV1 PE=1 SV=1 Back     alignment and function description
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
89895263 971 hypothetical protein DSY2517 [Desulfitob 0.430 0.155 0.467 3e-27
392394568 981 translation initiation factor 2 (bIF-2) 0.455 0.163 0.429 6e-27
300123208 1964 unnamed protein product [Blastocystis ho 0.452 0.080 0.391 3e-20
448302616 536 hypothetical protein C495_00010 [Natrono 0.407 0.266 0.346 2e-17
296111705 878 cell surface protein precursor [Leuconos 0.433 0.173 0.584 1e-16
260824862145 hypothetical protein BRAFLDRAFT_171555 [ 0.384 0.931 0.374 2e-16
190694439 612 polymorphic mucin variant C6/1/40r2.1 [S 0.470 0.269 0.244 1e-15
190694441 612 polymorphic mucin variant C6/1/40r2.2 [S 0.470 0.269 0.244 1e-15
190694351350 polymorphic mucin truncated splice varia 0.478 0.48 0.243 1e-15
190694443 612 polymorphic mucin variant C6/1/40r2.3 [S 0.470 0.269 0.244 1e-15
>gi|89895263|ref|YP_518750.1| hypothetical protein DSY2517 [Desulfitobacterium hafniense Y51] gi|219669694|ref|YP_002460129.1| translation initiation factor IF-2 [Desulfitobacterium hafniense DCB-2] gi|122997253|sp|Q24UI6.1|IF2_DESHY RecName: Full=Translation initiation factor IF-2 gi|89334711|dbj|BAE84306.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539954|gb|ACL21693.1| translation initiation factor IF-2 [Desulfitobacterium hafniense DCB-2] Back     alignment and taxonomy information
 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 110/167 (65%), Gaps = 16/167 (9%)

Query: 2   SERPMSERP-SDRPMSERP-SERPMSERPSLRPSERPMSERP-SERPMSERP-SERPMSE 57
            +RPM +RP   RPM +RP  +RPM +RP     +RPM +RP  +RPM +RP  +RPM +
Sbjct: 163 GQRPMGDRPQGQRPMGDRPQGQRPMGDRPQ---GQRPMGDRPQGQRPMGDRPQGQRPMGD 219

Query: 58  RP-SERPMSERPMSERP-SERPMSERPMSERP-SERP-SERLMSERPMSERP-SERPMSE 112
           RP  +RPM +RP  +RP  +RP  +RPM +RP  +RP  +R   +RPM +RP  +RPM +
Sbjct: 220 RPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGD 279

Query: 113 RP-SERPMSERP-SERPMSERPMSERP-SERPMSERPMSERP-SERP 155
           RP  +RPM +RP  +RPM +RP  +RP  +RP  +RPM +RP  +RP
Sbjct: 280 RPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRPMGDRPQGQRP 326




Source: Desulfitobacterium hafniense Y51

Species: Desulfitobacterium hafniense

Genus: Desulfitobacterium

Family: Peptococcaceae

Order: Clostridiales

Class: Clostridia

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|392394568|ref|YP_006431170.1| translation initiation factor 2 (bIF-2) [Desulfitobacterium dehalogenans ATCC 51507] gi|390525646|gb|AFM01377.1| bacterial translation initiation factor 2 (bIF-2) [Desulfitobacterium dehalogenans ATCC 51507] Back     alignment and taxonomy information
>gi|300123208|emb|CBK24481.2| unnamed protein product [Blastocystis hominis] Back     alignment and taxonomy information
>gi|448302616|ref|ZP_21492590.1| hypothetical protein C495_00010 [Natronorubrum sulfidifaciens JCM 14089] gi|445595458|gb|ELY49565.1| hypothetical protein C495_00010 [Natronorubrum sulfidifaciens JCM 14089] Back     alignment and taxonomy information
>gi|296111705|ref|YP_003622087.1| cell surface protein precursor [Leuconostoc kimchii IMSNU 11154] gi|295833237|gb|ADG41118.1| cell surface protein precursor [Leuconostoc kimchii IMSNU 11154] Back     alignment and taxonomy information
>gi|260824862|ref|XP_002607386.1| hypothetical protein BRAFLDRAFT_171555 [Branchiostoma floridae] gi|229292733|gb|EEN63396.1| hypothetical protein BRAFLDRAFT_171555 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|190694439|gb|ACE88786.1| polymorphic mucin variant C6/1/40r2.1 [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|190694441|gb|ACE88787.1| polymorphic mucin variant C6/1/40r2.2 [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|190694351|gb|ACE88742.1| polymorphic mucin truncated splice variant IC2/2/25r2.1 [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|190694443|gb|ACE88788.1| polymorphic mucin variant C6/1/40r2.3 [Schistosoma mansoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
UNIPROTKB|J9P0X8 5671 MLL2 "Uncharacterized protein" 0.452 0.028 0.404 2.6e-18
UNIPROTKB|H9KZW6 725 H9KZW6 "Uncharacterized protei 0.421 0.204 0.358 7e-16
UNIPROTKB|F1SHC3 5080 MLL2 "Uncharacterized protein" 0.495 0.034 0.367 7.4e-16
UNIPROTKB|I3LTW9 5114 MLL2 "Uncharacterized protein" 0.424 0.029 0.387 1.4e-15
UNIPROTKB|E2RQ26 5563 MLL2 "Uncharacterized protein" 0.452 0.028 0.369 2.8e-15
UNIPROTKB|O14686 5537 MLL2 "Histone-lysine N-methylt 0.461 0.029 0.366 5e-15
TAIR|locus:2085889 956 AT3G19020 [Arabidopsis thalian 0.441 0.162 0.307 1.8e-14
ZFIN|ZDB-GENE-040426-1397 756 zgc:64189 "zgc:64189" [Danio r 0.472 0.219 0.386 2.2e-14
UNIPROTKB|G3MZF2 5420 MLL2 "Uncharacterized protein" 0.441 0.028 0.357 3.5e-14
UNIPROTKB|E1B9N8 5448 MLL2 "Uncharacterized protein" 0.441 0.028 0.357 3.5e-14
UNIPROTKB|J9P0X8 MLL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 245 (91.3 bits), Expect = 2.6e-18, P = 2.6e-18
 Identities = 70/173 (40%), Positives = 81/173 (46%)

Query:     5 PMSERPSDRPMSERPSERPMSERPSL--RPSERPMSERPSERPMSERPSERPMSERPSER 62
             P SE P   P  E P   PM E P L  RP E P+S  P E P+S  P E  +S  P E 
Sbjct:   853 PRSEEPCLSPAPEEPRLSPMPEEPQLSPRPEEPPLSPMPEEPPLSPGPEEPRLSPGPEEP 912

Query:    63 PMSERPMSERPSERPMSER----PMSERPSERPSERLMSERPMSERPSERPMSERPSERP 118
              +S RP   RPS +P   R    P   R S RP E  +S RP   R S RP  E P E P
Sbjct:   913 RLSPRPEEPRPSPQPEEPRLSLGPEEPRLSPRPEEPCLSPRPEEPRLSPRP--EEPPEEP 970

Query:   119 -MSERPSERPMSERPMSERPSERPMSERPMSERPSERPMSERPLKDRLKLFSP 170
              +   P E P+   P  E PS  P+   P    P E P+S  PL + L L SP
Sbjct:   971 GLCPAPEELPLF-LPPGE-PSLSPLLGEPALSEPGEPPLS--PLPEELPL-SP 1018


GO:0008168 "methyltransferase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
UNIPROTKB|H9KZW6 H9KZW6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SHC3 MLL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LTW9 MLL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQ26 MLL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O14686 MLL2 "Histone-lysine N-methyltransferase MLL2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2085889 AT3G19020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1397 zgc:64189 "zgc:64189" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G3MZF2 MLL2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1B9N8 MLL2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
pfam10243506 pfam10243, MIP-T3, Microtubule-binding protein MIP 6e-05
pfam10243506 pfam10243, MIP-T3, Microtubule-binding protein MIP 5e-04
pfam10243506 pfam10243, MIP-T3, Microtubule-binding protein MIP 0.001
PRK14086 617 PRK14086, dnaA, chromosomal replication initiation 0.001
pfam11725 1771 pfam11725, AvrE, Pathogenicity factor 0.003
PTZ00449943 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry anti 0.004
>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 Back     alignment and domain information
 Score = 44.5 bits (105), Expect = 6e-05
 Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 13/178 (7%)

Query: 2   SERPMSERPSDRPMSERPSERPMSERPSLRPSERPMSERPSERPMSERPSERPMSERPSE 61
             +   +    +  ++        E+   +  E P      ++    R   RP      +
Sbjct: 123 KPKEEPKDRKPKEEAKEKRPPKEKEKEKEKKVEEPRDREEEKKRERVRAKSRPKKPPKKK 182

Query: 62  RPMSERPMSERPSERPMSERPMSERPSERPSERLMSERPMSERPSERPMSE--------- 112
            P  ++   E   +R  +   +  +P E        +     +  E   S          
Sbjct: 183 PPNKKKEPPEEEKQRQAAREAVKGKPEEPDVNEEREKEEDDGKDRETTTSPMEEDESRQS 242

Query: 113 ----RPSERPMSERPSERPMSERPMSERPSERPMSERPMSERPSERPMSERPLKDRLK 166
               R S   + +      M+     E         R     PS RP S RP   R+K
Sbjct: 243 SEISRRSSSSLKKPDPSPSMASPETRESSKRTETRPRTSLRPPSARPASARPAPPRVK 300


This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 Back     alignment and domain information
>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 Back     alignment and domain information
>gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional Back     alignment and domain information
>gnl|CDD|221188 pfam11725, AvrE, Pathogenicity factor Back     alignment and domain information
>gnl|CDD|185628 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00