Psyllid ID: psy5746

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
ENVIADQGISITNQIETEEPEAKKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHcccEEcccccccccccccccccccEEEcccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccccccEEEEcEEEEEccEEEEEEEEEcccccccccccccEEEEEEEcccccccEEEEEEEEEccccccccccEEEEEEEccccccccccccccccHHHHHHHHHcccccEEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccHHccccccccHHHHHHHHHHcccEEEEEHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcEEEEcccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccEEEEcccEEEEccEEEEEEEEcccccccccccccEEEEEEEEEccccccEEEEEEEEEccccccEEccEEEEEEEcccccccccEccccccHHHHHHHHHHccccEEEEEEEccc
Coil and Loop (DISEMBL)
enviadqgisitnqieteepeAKKRKIEKALVKADKLEQRLGGILCCavcldlprsaVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCkysmigcpwcgpqhelksheescahphksGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNelqmkpyrtdeFIHKLFYETSRFSAFNNQWVVKARINtcqrdptlssdreMTYQLILKTKTTTAMTVHFMVLrgpfgdmkvqpkihkfefneqenespyfilpfpdtsecnrhlatKTINFRLIMFLASK
Flexible Loop (DISEMBL)
enviadqgisitnqieteepeakkRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCqrdptlssdremTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Low Complexity Region (SEG)
ENVIADQGISITNQIETEEPEAKKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVtlllrkllttCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Disordered region (IsUnstruct)
******************************LVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGP**************************AIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFL***
Disordered Region (DISOPRED)
*****************************************GGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIE*******RLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARI**************MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Disordered Region (DISEMBL)
ENVIADQGISITNQIETEEPEAKKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Disordered Region (DISPRO)
*****D************************LVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ENVIADQGISITNQIETEEPEAKKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	292	2.2.26 [Sep-21-2011]
Q9VZV5	412	Cysteine and histidine-ri	yes	N/A	0.883	0.626	0.477	2e-75
Q2TAD9	365	Cysteine and histidine-ri	N/A	N/A	0.924	0.739	0.393	2e-62
Q6GNX1	365	Cysteine and histidine-ri	N/A	N/A	0.924	0.739	0.389	2e-61
Q08CH8	375	Cysteine and histidine-ri	yes	N/A	0.969	0.754	0.370	1e-60
Q6ZMK1	362	Cysteine and histidine-ri	yes	N/A	0.671	0.541	0.484	4e-57
Q7YR89	311	Cysteine and histidine-ri	yes	N/A	0.684	0.643	0.485	1e-56
Q5BK76	311	Cysteine and histidine-ri	no	N/A	0.684	0.643	0.48	2e-56
Q9QXA1	311	Cysteine and histidine-ri	yes	N/A	0.684	0.643	0.48	2e-56

>sp|Q9VZV5|CYHR1_DROME Cysteine and histidine-rich protein 1 homolog OS=Drosophila melanogaster GN=CG32486 PE=2 SV=2

 Score =  282 bits (722), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 189/312 (60%), Gaps = 54/312 (17%)

Query: 35  DKLEQRLGGILCCAVCLDLPRSAVY--QMQDFVMK--LLHVLTVG-------------LK 77
           +KL  R+   LCCAVCLDLP++A+Y  QM   +      H+L  G             ++
Sbjct: 101 EKLAHRISNALCCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVE 160

Query: 78  SARAVHHVTLLLRKLL-------------------------------TTCKYSMIGCPWC 106
            +++     L + K                                 T CKY  IGC W 
Sbjct: 161 ISKSTASRNLAVEKAASELPSECQFCNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWR 220

Query: 107 GPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQM 166
           GP HE   HE +C HP KSG EVM +L+A +     EK++++ L +LLSYEKIIFN+LQM
Sbjct: 221 GPYHETNEHERNCLHPQKSGYEVMAALEAHDDRIKEEKKMFNTLIDLLSYEKIIFNDLQM 280

Query: 167 KPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTA 226
           KPYRTDE++HKLFYET+RFSAFN QWVVKARIN  QRDP  S++R +TYQLILKTKT+T 
Sbjct: 281 KPYRTDEYVHKLFYETARFSAFNQQWVVKARINNSQRDPHQSNERTITYQLILKTKTSTP 340

Query: 227 MTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPD------TSECNRHLATKT 280
           M++HF  L+GPF DMKV  +I+K EF E   ES Y++LP PD      +SECNR LA K 
Sbjct: 341 MSIHFFALKGPFSDMKVSTQIYKHEFTETSTESEYYVLPLPDGVGGSGSSECNRMLANKG 400

Query: 281 INFRLIMFLASK 292
           INFRL+MFL +K
Sbjct: 401 INFRLLMFLLNK 412

Drosophila melanogaster (taxid: 7227)

>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis GN=cyhr1-b PE=2 SV=2

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 178/318 (55%), Gaps = 48/318 (15%)

Query: 23  KKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMK----LLHVLT----- 73
           KKR   +A   + +LE+RL  +LCCAVCLDLP+++VYQ  +  +      +H+L      
Sbjct: 48  KKRLRSEAEPGSVRLEERLYSVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLK 107

Query: 74  ---VGLKSARAVHHVTLLLRKL------------------------------------LT 94
                  + R     +L  R L                                    +T
Sbjct: 108 EEQATCPNCRCEISKSLCCRNLAVEKAISELPSDCGFCLKQFPRSLLERHKKEECQDRVT 167

Query: 95  TCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELL 154
            CKY  IGCPW GP HEL  HE  C HP K+G E+ME L  ++ T   E +LY+++F LL
Sbjct: 168 QCKYKRIGCPWQGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLL 227

Query: 155 SYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMT 214
           S+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R ++
Sbjct: 228 SFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLS 287

Query: 215 YQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNR 274
           +QLILK+K  + M   F++L+GP+ D+K+ P I++F F  + NE+ Y  LP  D+ ECN+
Sbjct: 288 FQLILKSKVNSPMECSFLLLKGPYDDVKIHPVIYQFVFTNENNETEYVPLPIIDSVECNK 347

Query: 275 HLATKTINFRLIMFLASK 292
            LA K IN RL +F   K
Sbjct: 348 LLAAKNINLRLFIFQIQK 365

Xenopus laevis (taxid: 8355)

>sp|Q6GNX1|CYR1A_XENLA Cysteine and histidine-rich protein 1-A OS=Xenopus laevis GN=cyhr1-a PE=2 SV=2

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/318 (38%), Positives = 176/318 (55%), Gaps = 48/318 (15%)

Query: 23  KKRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMK----LLHVLT----- 73
           KKR   +A   + +LE+RL  +LCC VCLDLP+++VYQ  +  +      +H+L      
Sbjct: 48  KKRLRSEAEPGSVRLEERLYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLK 107

Query: 74  ---VGLKSARAVHHVTLLLRKL------------------------------------LT 94
                  + R     +L  R L                                    +T
Sbjct: 108 EEQATCPNCRCEISKSLCCRNLAVEKAVSELPSDCGFCLKQFPRSLLERHKKEECQDRVT 167

Query: 95  TCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELL 154
            CKY  IGCPW GP HEL  HE  C HP K+G E+ME L  ++ T   E +LY+++F LL
Sbjct: 168 QCKYKRIGCPWEGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLL 227

Query: 155 SYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMT 214
           S+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R ++
Sbjct: 228 SFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLS 287

Query: 215 YQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNR 274
           +QLILK+K  + M   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ ECN+
Sbjct: 288 FQLILKSKINSPMECSFLLLKGPYDDVKIHPVIYHFVFTNENNETEYVPLPIIDSVECNK 347

Query: 275 HLATKTINFRLIMFLASK 292
            LA K IN RL +F   K
Sbjct: 348 LLAAKNINLRLFIFQIQK 365

Xenopus laevis (taxid: 8355)

>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2 SV=1

 Score =  233 bits (595), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 182/332 (54%), Gaps = 49/332 (14%)

Query: 6   DQGISITNQIETEEPEAK-KRKIEKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDF 64
           + G+     +   +P+A  K+++     +A KLE+RL  +LCC VCLDLP+++VYQ  + 
Sbjct: 40  ESGVRRDGSVGEADPDAPPKKRVRLQEGEAGKLEERLYSVLCCTVCLDLPKASVYQCTNG 99

Query: 65  VMK----LLHVLTVG-LKSARAV------------------------------------- 82
            +      +H+L    LK  +A                                      
Sbjct: 100 HLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECSYCLKQF 159

Query: 83  ------HHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAI 136
                  H T   +  +T CKY  IGCPW GP HEL +HE  C HP K+G E+M  L  +
Sbjct: 160 PRSGLDRHQTEECQDRVTQCKYKRIGCPWQGPFHELSAHEAECCHPSKTGMELMGILDEM 219

Query: 137 ETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKA 196
           + +   E +LY+++F LL +EKI F E+Q +PYRTD+FI +L+YET RF+  N  WV+KA
Sbjct: 220 DQSHRRELQLYNSIFSLLCFEKIGFTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKA 279

Query: 197 RINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQE 256
           R+N  +R+P LS  R + +QLILK+K  +A+   F++L+GP+ D+K++P I    F+   
Sbjct: 280 RVNDSERNPNLSCKRTLAFQLILKSKVNSALECSFLLLKGPYEDIKIKPVIQHHVFSNDA 339

Query: 257 NESPYFILPFPDTSECNRHLATKTINFRLIMF 288
           NE+ Y  LP  D+ ECN+ LA K IN RL +F
Sbjct: 340 NETEYAPLPICDSVECNKLLAAKNINLRLFIF 371

Danio rerio (taxid: 7955)

>sp|Q6ZMK1|CYHR1_HUMAN Cysteine and histidine-rich protein 1 OS=Homo sapiens GN=CYHR1 PE=2 SV=2

 Score =  221 bits (564), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 138/196 (70%)

Query: 93  LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
           +T CKY  IGCPW GP HEL  HE +CAHP K+G+E+ME L  ++ +   E +LY+++F 
Sbjct: 163 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS 222

Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
           LLS+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R 
Sbjct: 223 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 282

Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
           +++QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ EC
Sbjct: 283 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 342

Query: 273 NRHLATKTINFRLIMF 288
           N+ LA K IN RL +F
Sbjct: 343 NKLLAAKNINLRLFLF 358

Homo sapiens (taxid: 9606)

>sp|Q7YR89|CYHR1_BOVIN Cysteine and histidine-rich protein 1 OS=Bos taurus GN=CYHR1 PE=2 SV=2

 Score =  219 bits (559), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 138/200 (69%)

Query: 93  LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
           +T CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F 
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171

Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
           LLS+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R 
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231

Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
           +++QL+LK+K T  +   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVKISPVIYHFVFTNESNETDYVPLPIVDSVEC 291

Query: 273 NRHLATKTINFRLIMFLASK 292
           N+ LA K IN RL +F   K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311

Bos taurus (taxid: 9913)

>sp|Q5BK76|CYHR1_RAT Cysteine and histidine-rich protein 1 OS=Rattus norvegicus GN=Cyhr1 PE=2 SV=2

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 138/200 (69%)

Query: 93  LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
           +T CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F 
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171

Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
           LLS+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R 
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231

Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
           +++QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 291

Query: 273 NRHLATKTINFRLIMFLASK 292
           N+ LA K IN RL +F   K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311

Rattus norvegicus (taxid: 10116)

>sp|Q9QXA1|CYHR1_MOUSE Cysteine and histidine-rich protein 1 OS=Mus musculus GN=Cyhr1 PE=1 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 138/200 (69%)

Query: 93  LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFE 152
           +T CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F 
Sbjct: 112 VTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFS 171

Query: 153 LLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDRE 212
           LLS+EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R 
Sbjct: 172 LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRT 231

Query: 213 MTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSEC 272
           +++QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ EC
Sbjct: 232 LSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVEC 291

Query: 273 NRHLATKTINFRLIMFLASK 292
           N+ LA K IN RL +F   K
Sbjct: 292 NKLLAAKNINLRLFLFQIQK 311

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
322784379	421	hypothetical protein SINV_04905 [Solenop	0.938	0.650	0.563	2e-98
307214402	525	Cysteine and histidine-rich protein 1-li	0.924	0.514	0.554	2e-97
332029294	350	Cysteine and histidine-rich protein 1-li	0.938	0.782	0.556	3e-97
307173925	370	Cysteine and histidine-rich protein 1-li	0.938	0.740	0.542	3e-96
328783891	412	PREDICTED: cysteine and histidine-rich p	0.938	0.665	0.551	5e-96
383856187	407	PREDICTED: LOW QUALITY PROTEIN: cysteine	0.938	0.673	0.541	1e-94
340717207	412	PREDICTED: cysteine and histidine-rich p	0.938	0.665	0.541	6e-94
350407712	458	PREDICTED: cysteine and histidine-rich p	0.938	0.598	0.541	7e-94
156546884	386	PREDICTED: cysteine and histidine-rich p	0.934	0.707	0.522	4e-92
91083547	348	PREDICTED: similar to CG32486 CG32486-PD	0.979	0.821	0.487	7e-87

>gi|322784379|gb|EFZ11350.1| hypothetical protein SINV_04905 [Solenopsis invicta]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 183/325 (56%), Positives = 218/325 (67%), Gaps = 51/325 (15%)

Query: 19  EPEAKKRKI---EKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVG 75
           EP+ K+RK    E A     KLE RLGGILCCAVCLDLPR+AVYQ  +  +      T  
Sbjct: 97  EPDKKRRKTMRAEDAAKTEQKLEHRLGGILCCAVCLDLPRAAVYQCANGHLMCAGCFTHV 156

Query: 76  LKSAR----------------------------AV--------------------HHVTL 87
           L  AR                            AV                    HH   
Sbjct: 157 LADARLRDEMATCPNCRIEISKTTASRNLAVEKAVSELPAECQYCAKEFPRNSLEHHEEA 216

Query: 88  LLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLY 147
           +  + +++CKYS IGCPW GP HE+  HE  CAHPH++GA+VME+L+ I+     E+RLY
Sbjct: 217 MCEERISSCKYSRIGCPWRGPNHEIPEHEGHCAHPHRTGADVMEALREIDARTLEERRLY 276

Query: 148 DNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTL 207
           DN+F+LLSYEKI FN+LQMKPYRTDEFIHKLFYETSRF AFNNQWVVKARIN+ QRDPT 
Sbjct: 277 DNVFDLLSYEKITFNDLQMKPYRTDEFIHKLFYETSRFGAFNNQWVVKARINSNQRDPTQ 336

Query: 208 SSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFP 267
           SS+R++TYQLILKTKTT  + V++++L+GPFGDMKV P+IH+FEF EQENESPYF LP P
Sbjct: 337 SSERDITYQLILKTKTTYPLPVYYLILKGPFGDMKVHPRIHRFEFTEQENESPYFTLPLP 396

Query: 268 DTSECNRHLATKTINFRLIMFLASK 292
           DT+ECNR LA K I+FRLIMFLASK
Sbjct: 397 DTAECNRLLAAKAISFRLIMFLASK 421

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214402|gb|EFN89473.1| Cysteine and histidine-rich protein 1-like protein [Harpegnathos saltator]

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/328 (55%), Positives = 218/328 (66%), Gaps = 58/328 (17%)

Query: 19  EPEAKKRKIEKALVKAD------KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVL 72
           EP+ K+RK+    V+ D      KLE RLGGILCCAVCLDLPRSAVYQ  +  +      
Sbjct: 202 EPDKKRRKV----VRGDGNKTEQKLEHRLGGILCCAVCLDLPRSAVYQCTNGHLMCAGCF 257

Query: 73  TVGLKSAR----------------------------AV--------------------HH 84
           T  L  AR                            AV                    HH
Sbjct: 258 THVLADARLRDELATCPNCRIEISKTSASRNLAVEKAVSELPAECQYCAKEFPRNYVEHH 317

Query: 85  VTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEK 144
              +  + +++CK+S IGCPW GP HE   HE  C HPH++GA+VME+L  I+     E+
Sbjct: 318 EEAMCEERISSCKFSRIGCPWRGPNHERLEHEAHCVHPHRTGADVMEALLDIDARTLEER 377

Query: 145 RLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRD 204
           RLYDN+F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRFSAFNNQWVVKARIN+ QRD
Sbjct: 378 RLYDNVFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFSAFNNQWVVKARINSSQRD 437

Query: 205 PTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFIL 264
           PT SS+R+MTYQLILK+KTT  + +H+++L+GPFGDMKVQP+IH+FEF EQ+NESPY  L
Sbjct: 438 PTQSSERDMTYQLILKSKTTYPLPLHYLILKGPFGDMKVQPRIHRFEFTEQDNESPYLPL 497

Query: 265 PFPDTSECNRHLATKTINFRLIMFLASK 292
           P PDT+ECNR LA K INFRLIMFLASK
Sbjct: 498 PLPDTAECNRLLAAKAINFRLIMFLASK 525

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029294|gb|EGI69277.1| Cysteine and histidine-rich protein 1-like protein [Acromyrmex echinatior]

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 181/325 (55%), Positives = 216/325 (66%), Gaps = 51/325 (15%)

Query: 19  EPEAKKRKI---EKALVKADKLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVG 75
           EP+ K+R+    E A     KLE RLGGILCCAVCLDLPR+AVYQ  +  +      T  
Sbjct: 26  EPDKKRRRTVRAEDAAKTEQKLEHRLGGILCCAVCLDLPRAAVYQCANGHLMCAGCFTHV 85

Query: 76  LKSAR----------------------------AV--------------------HHVTL 87
           L  AR                            AV                    HH   
Sbjct: 86  LADARLRDEMATCPNCRIEISKTTASRNLAVEKAVSELPAECQYCAKEFPRNSLEHHEEA 145

Query: 88  LLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLY 147
           +  + +++CKYS IGCPW GP HE+  HE  C HPH++GA+VME+L  I+     E+RLY
Sbjct: 146 MCEERISSCKYSRIGCPWRGPNHEIPEHESHCVHPHRTGADVMEALCEIDARTLEERRLY 205

Query: 148 DNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTL 207
           DN+F+LLSYEKI FN+LQMKPYRTDEFIHKLFYETSRF AFNNQWVVKARIN+ QRDPT 
Sbjct: 206 DNVFDLLSYEKITFNDLQMKPYRTDEFIHKLFYETSRFGAFNNQWVVKARINSNQRDPTQ 265

Query: 208 SSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFP 267
           SS+R++TYQLILKTKTT  + V++++L+GPFGDMKV P+IH+FEF EQENESPYF LP P
Sbjct: 266 SSERDITYQLILKTKTTYPLPVYYLILKGPFGDMKVHPRIHRFEFTEQENESPYFTLPLP 325

Query: 268 DTSECNRHLATKTINFRLIMFLASK 292
           DT+ECNR LA K I+FRLIMFLASK
Sbjct: 326 DTAECNRLLAAKAISFRLIMFLASK 350

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173925|gb|EFN64673.1| Cysteine and histidine-rich protein 1-like protein [Camponotus floridanus]

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 178/328 (54%), Positives = 217/328 (66%), Gaps = 54/328 (16%)

Query: 19  EPEAKKRKIEKALVKAD------KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVL 72
           EP+ K+RK      ++D      KLE RLGGILCCAVCLDLPR+AVYQ  +  +      
Sbjct: 43  EPDKKRRKTTNGRPESDAAKTEQKLEHRLGGILCCAVCLDLPRAAVYQCANGHLMCAGCF 102

Query: 73  TVGLKSAR----------------------------AV--------------------HH 84
           T  L  AR                            AV                    HH
Sbjct: 103 THVLADARLRDEMATCPNCRIEISKTSASRNLAVEKAVSELPAECQYCAKEFPRNSLEHH 162

Query: 85  VTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEK 144
                 + +++CKY+ IGCPW GP HE+  HE  C HPH++GA+VME+L+ I+     E+
Sbjct: 163 EESTCEERISSCKYNRIGCPWRGPNHEIPEHEAHCVHPHRTGADVMEALREIDARTLEER 222

Query: 145 RLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRD 204
           RLYDN+F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRF AFN+QWVVKA+IN+ QRD
Sbjct: 223 RLYDNVFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFGAFNHQWVVKAKINSSQRD 282

Query: 205 PTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFIL 264
           PT SS+R+MTYQLILKTKTT  + V++++L+GPFGDMKV P+IH+FEF EQENESPYF L
Sbjct: 283 PTQSSERDMTYQLILKTKTTYPLPVYYLILKGPFGDMKVHPRIHRFEFTEQENESPYFTL 342

Query: 265 PFPDTSECNRHLATKTINFRLIMFLASK 292
           P PDT+ECNR LA K I+FRLIMFLASK
Sbjct: 343 PLPDTAECNRLLAAKAISFRLIMFLASK 370

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783891|ref|XP_396554.3| PREDICTED: cysteine and histidine-rich protein 1 homolog [Apis mellifera] gi|380018800|ref|XP_003693309.1| PREDICTED: cysteine and histidine-rich protein 1 homolog [Apis florea]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 178/323 (55%), Positives = 216/323 (66%), Gaps = 49/323 (15%)

Query: 19  EPEAKKRKIEKALVKAD-KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLK 77
           EP+ K+RK+ +   K + KLE RLGGILCCAVCLDLP++AVYQ  +  +      T  L 
Sbjct: 90  EPDKKRRKVSRNDGKTEQKLEHRLGGILCCAVCLDLPKAAVYQCTNGHLMCAGCFTHVLA 149

Query: 78  SAR----------------------------AV--------------------HHVTLLL 89
            AR                            AV                     H   + 
Sbjct: 150 DARLRDEMATCPNCRIEISRTSPSRNLAVEKAVSELPAECQYCAKEFPRNSLERHEETMC 209

Query: 90  RKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDN 149
            + +++CKYS IGCPW GP HE   HE  C HPH+SG +VME+L+ I+     E+RLYDN
Sbjct: 210 EERISSCKYSRIGCPWRGPNHERPEHEAHCVHPHRSGLDVMEALRDIDARTLEERRLYDN 269

Query: 150 LFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSS 209
           +F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRF+AFNNQWVVKARIN  QRDPT SS
Sbjct: 270 VFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFTAFNNQWVVKARINNSQRDPTQSS 329

Query: 210 DREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDT 269
           +R+MTYQLILKTKTT  + +H+++L+GPFGDMKVQP+IHKFEF +QENESPY  LP PDT
Sbjct: 330 ERDMTYQLILKTKTTYPLPLHYLILKGPFGDMKVQPRIHKFEFTDQENESPYLPLPLPDT 389

Query: 270 SECNRHLATKTINFRLIMFLASK 292
           +ECNR LA + I+FRLIMFLASK
Sbjct: 390 AECNRLLAARAISFRLIMFLASK 412

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856187|ref|XP_003703591.1| PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich protein 1 homolog, partial [Megachile rotundata]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 175/323 (54%), Positives = 213/323 (65%), Gaps = 49/323 (15%)

Query: 19  EPEAKKRKIEKALVKAD-KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLK 77
           EP+ K+RK+ +   K + KLE RLGGILCCAVCLDLP++AVYQ  +  +      T  L 
Sbjct: 85  EPDKKRRKVSRNDGKTEQKLEHRLGGILCCAVCLDLPKAAVYQCTNGHLMCAGCFTHVLA 144

Query: 78  SAR----------------------------AV--------------------HHVTLLL 89
            AR                            AV                     H   + 
Sbjct: 145 DARLRDEMATCPNCRIEISRTSPSRNLAVEKAVSELPAECQYCAKEFPRNSLERHEETMC 204

Query: 90  RKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDN 149
            + +++CKYS IGCPW GP HE   HE  C HPH+SG +VME+L+ I+     E+RLYDN
Sbjct: 205 EERISSCKYSRIGCPWRGPNHERPEHEAHCVHPHRSGLDVMEALRDIDARTLEERRLYDN 264

Query: 150 LFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSS 209
           +F+LLSYEKI FN+LQMKPYRTDEF+HKLFYET RF+AFNN WVVKARIN  QRDPT SS
Sbjct: 265 VFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETPRFTAFNNHWVVKARINNSQRDPTQSS 324

Query: 210 DREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDT 269
           +R+MTYQLILKTKTT  + +H+ +L+GPFGDMKVQP+IH+FEF +QENESPY  LP PDT
Sbjct: 325 ERDMTYQLILKTKTTYPLPLHYFILKGPFGDMKVQPRIHRFEFTDQENESPYLPLPLPDT 384

Query: 270 SECNRHLATKTINFRLIMFLASK 292
           +ECNR LA + I+FRLIMFLASK
Sbjct: 385 AECNRLLAARAISFRLIMFLASK 407

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717207|ref|XP_003397078.1| PREDICTED: cysteine and histidine-rich protein 1 homolog [Bombus terrestris]

 Score =  350 bits (897), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 175/323 (54%), Positives = 215/323 (66%), Gaps = 49/323 (15%)

Query: 19  EPEAKKRKIEKALVKAD-KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLK 77
           EP+ K+RK+ +   K + KLE RLGGILCCAVCLDLP++AVYQ  +  +      T  L 
Sbjct: 90  EPDKKRRKLSRNDGKTEQKLEHRLGGILCCAVCLDLPKAAVYQCTNGHLMCAGCFTHVLA 149

Query: 78  SAR----------------------------AV--------------------HHVTLLL 89
            AR                            AV                     H   + 
Sbjct: 150 DARLRDEMATCPNCRIEISRTSPSRNLAVEKAVSELPAECQYCAKEFPRNSLERHEETMC 209

Query: 90  RKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDN 149
            + +++CKYS IGCPW GP HE   HE  C HPH+SG +VM++L+ I+     E+RLYDN
Sbjct: 210 EERISSCKYSRIGCPWRGPNHERPEHEAHCVHPHRSGLDVMDALRDIDARTLEERRLYDN 269

Query: 150 LFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSS 209
           +F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRF+AFNNQWVVKARIN  QRDPT SS
Sbjct: 270 VFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFTAFNNQWVVKARINNSQRDPTQSS 329

Query: 210 DREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDT 269
           +R+MTYQLILK+KTT  + +H+++L+GPFGDMKVQP+IHKFEF +QE ESPY  LP PDT
Sbjct: 330 ERDMTYQLILKSKTTYPLPLHYLILKGPFGDMKVQPRIHKFEFTDQEIESPYLPLPLPDT 389

Query: 270 SECNRHLATKTINFRLIMFLASK 292
           +ECNR LA + I+FRLIMFLASK
Sbjct: 390 AECNRLLAARAISFRLIMFLASK 412

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407712|ref|XP_003488169.1| PREDICTED: cysteine and histidine-rich protein 1 homolog [Bombus impatiens]

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 175/323 (54%), Positives = 215/323 (66%), Gaps = 49/323 (15%)

Query: 19  EPEAKKRKIEKALVKAD-KLEQRLGGILCCAVCLDLPRSAVYQMQDFVMKLLHVLTVGLK 77
           EP+ K+RK+ +   K + KLE RLGGILCCAVCLDLP++AVYQ  +  +      T  L 
Sbjct: 136 EPDKKRRKLSRNDGKTEQKLEHRLGGILCCAVCLDLPKAAVYQCTNGHLMCAGCFTHVLA 195

Query: 78  SAR----------------------------AV--------------------HHVTLLL 89
            AR                            AV                     H   + 
Sbjct: 196 DARLRDEMATCPNCRIEISRTSPSRNLAVEKAVSELPAECQYCAKEFPRNSLERHEETMC 255

Query: 90  RKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDN 149
            + +++CKYS IGCPW GP HE   HE  C HPH+SG +VM++L+ I+     E+RLYDN
Sbjct: 256 EERISSCKYSRIGCPWRGPNHERPEHEAHCVHPHRSGLDVMDALRDIDARTLEERRLYDN 315

Query: 150 LFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSS 209
           +F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRF+AFNNQWVVKARIN  QRDPT SS
Sbjct: 316 VFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFTAFNNQWVVKARINNSQRDPTQSS 375

Query: 210 DREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDT 269
           +R+MTYQLILK+KTT  + +H+++L+GPFGDMKVQP+IHKFEF +QE ESPY  LP PDT
Sbjct: 376 ERDMTYQLILKSKTTYPLPLHYLILKGPFGDMKVQPRIHKFEFTDQEIESPYLPLPLPDT 435

Query: 270 SECNRHLATKTINFRLIMFLASK 292
           +ECNR LA + I+FRLIMFLASK
Sbjct: 436 AECNRLLAARAISFRLIMFLASK 458

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156546884|ref|XP_001606747.1| PREDICTED: cysteine and histidine-rich protein 1 homolog [Nasonia vitripennis]

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 176/337 (52%), Positives = 213/337 (63%), Gaps = 64/337 (18%)

Query: 19  EPEAKKRKIEKALVKAD---------------KLEQRLGGILCCAVCLDLPRSAVYQMQD 63
           EPE KKRKI  AL  A                KLE RLGGILCC VC DLPR+AVYQ  +
Sbjct: 51  EPERKKRKI-PALQAAGALGQDGLPLPGKPEQKLEHRLGGILCCVVCFDLPRAAVYQCTN 109

Query: 64  FVMKLLHVLTVGLKSAR----------------------------AV------------- 82
             +      T  L  AR                            AV             
Sbjct: 110 GHLMCAGCFTHVLADARLRDELATCPNCRIEISKTSASRNLAVEKAVSELPSECQYCAKE 169

Query: 83  -------HHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQA 135
                   H   +  + +++CKYS IGCPW GP HE   HE  C HPH++GA+VME+L+ 
Sbjct: 170 FPRNSLERHEETMCEERISSCKYSRIGCPWRGPNHERPEHEAHCVHPHRTGADVMEALRD 229

Query: 136 IETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVK 195
           I+     E++L+DN+F+LLSYEKI FN+LQMKPYRTDEF+HKLFYETSRF+AFNNQWVV 
Sbjct: 230 IDAKNLEERKLFDNVFDLLSYEKITFNDLQMKPYRTDEFVHKLFYETSRFTAFNNQWVVT 289

Query: 196 ARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQ 255
           ARIN  QRDPT SS R+MTYQLILKTKTT  +++H+++L+GPFGDMKVQP+IH+F+F +Q
Sbjct: 290 ARINNSQRDPTQSSQRDMTYQLILKTKTTCPLSLHYVILKGPFGDMKVQPRIHRFDFTDQ 349

Query: 256 ENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK 292
           +NESPY  LP PD +ECNR LA K I+FRLIMFLASK
Sbjct: 350 DNESPYLPLPIPDAAECNRLLAAKAISFRLIMFLASK 386

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083547|ref|XP_966730.1| PREDICTED: similar to CG32486 CG32486-PD [Tribolium castaneum] gi|270007803|gb|EFA04251.1| hypothetical protein TcasGA2_TC014541 [Tribolium castaneum]

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 169/347 (48%), Positives = 218/347 (62%), Gaps = 61/347 (17%)

Query: 5   ADQGISITNQIETE-------EPEAKKRKIEKALVKAD----KLEQRLGGILCCAVCLDL 53
           A+   S T+  E E       EPEAK+RK   A ++ D    +LE+RLGGILCCAVCLDL
Sbjct: 4   AEATTSTTDSTEPEKITEDLLEPEAKRRKT--AAIQQDEKKYRLEERLGGILCCAVCLDL 61

Query: 54  PRSAVYQMQDFVMKLLHVLTVGLKSARAVHHV------------TLLLRKL--------- 92
           P++AVYQ  +  +      T  L  AR                 TL  R L         
Sbjct: 62  PKAAVYQCSNGHLMCAGCFTHILADARLRDETSTCPTCRVEICKTLATRNLAVENAVSEL 121

Query: 93  ---------------------------LTTCKYSMIGCPWCGPQHELKSHEESCAHPHKS 125
                                      ++ CKY  IGCPW GP HE   HE+ C HPHKS
Sbjct: 122 PSECQFCNKQFPRNSLEKHEDEECEDRISGCKYHRIGCPWRGPVHERAQHEKECGHPHKS 181

Query: 126 GAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSRF 185
           GAEVME+L+ ++     E++LY  +FELL Y+KI FN++Q+KPYRTD+F+H+LFYE+SRF
Sbjct: 182 GAEVMEALEILDQQLIEERKLYKTIFELLGYDKITFNDIQLKPYRTDDFVHRLFYESSRF 241

Query: 186 SAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQP 245
           SAFNNQWVVKA+I+  Q+DPT SS+R+MTYQLILK+KT+T +++ ++VLRGP GD+K+ P
Sbjct: 242 SAFNNQWVVKAKISDNQKDPTQSSERDMTYQLILKSKTSTPLSLSYIVLRGPVGDVKINP 301

Query: 246 KIHKFEFNEQENESPYFILPFPDTSECNRHLATKTINFRLIMFLASK 292
           +++ F+F EQE E+PY   P PDT+ECNR LA KTINFRLIMFLASK
Sbjct: 302 RVYNFDFTEQETETPYEHFPLPDTAECNRLLAAKTINFRLIMFLASK 348

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
FB|FBgn0052486	412	CG32486 [Drosophila melanogast	0.674	0.478	0.620	3.2e-75
UNIPROTKB|E2R758	406	CYHR1 "Uncharacterized protein	0.674	0.485	0.487	9.9e-62
UNIPROTKB|E9PJD7	404	CYHR1 "Cysteine and histidine-	0.674	0.487	0.482	9.9e-62
ZFIN|ZDB-GENE-060929-720	382	zgc:153061 "zgc:153061" [Danio	0.674	0.515	0.477	8.8e-61
UNIPROTKB|Q7YR89	311	CYHR1 "Cysteine and histidine-	0.674	0.633	0.487	2.1e-52
UNIPROTKB|E2RN78	362	CYHR1 "Uncharacterized protein	0.674	0.544	0.487	2.1e-52
UNIPROTKB|Q6ZMK1	362	CYHR1 "Cysteine and histidine-	0.674	0.544	0.482	2.1e-52
UNIPROTKB|F1RSP2	362	CYHR1 "Uncharacterized protein	0.674	0.544	0.487	2.7e-52
MGI|MGI:1859320	311	Cyhr1 "cysteine and histidine	0.674	0.633	0.482	5.6e-52
RGD|1561328	311	RGD1561328 "cysteine and histi	0.674	0.633	0.482	5.6e-52

FB|FBgn0052486 CG32486 [Drosophila melanogaster (taxid:7227)]

 Score = 677 (243.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
 Identities = 126/203 (62%), Positives = 153/203 (75%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGC W GP HE   HE +C HP KSG EVM +L+A +     EK++++ L +LLS
Sbjct:   210 CKYHRIGCQWRGPYHETNEHERNCLHPQKSGYEVMAALEAHDDRIKEEKKMFNTLIDLLS 269

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             YEKIIFN+LQMKPYRTDE++HKLFYET+RFSAFN QWVVKARIN  QRDP  S++R +TY
Sbjct:   270 YEKIIFNDLQMKPYRTDEYVHKLFYETARFSAFNQQWVVKARINNSQRDPHQSNERTITY 329

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPD------T 269
             QLILKTKT+T M++HF  L+GPF DMKV  +I+K EF E   ES Y++LP PD      +
Sbjct:   330 QLILKTKTSTPMSIHFFALKGPFSDMKVSTQIYKHEFTETSTESEYYVLPLPDGVGGSGS 389

Query:   270 SECNRHLATKTINFRLIMFLASK 292
             SECNR LA K INFRL+MFL +K
Sbjct:   390 SECNRMLANKGINFRLLMFLLNK 412

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

UNIPROTKB|E2R758 CYHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 543 (196.2 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
 Identities = 96/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   210 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 269

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   270 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 329

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   330 QLLLKSKVTAPLECSFLLLKGPYDDVKISPVIYHFVFTNESNETDYVPLPIVDSVECNKL 389

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   390 LAAKNINLRLFLFQIQK 406

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PJD7 CYHR1 "Cysteine and histidine-rich protein 1" [Homo sapiens (taxid:9606)]

 Score = 543 (196.2 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
 Identities = 95/197 (48%), Positives = 137/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G+E+ME L  ++ +   E +LY+++F LLS
Sbjct:   208 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLS 267

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   268 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 327

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   328 QLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVECNKL 387

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   388 LAAKNINLRLFLFQIQK 404

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-060929-720 zgc:153061 "zgc:153061" [Danio rerio (taxid:7955)]

 Score = 522 (188.8 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
 Identities = 94/197 (47%), Positives = 132/197 (67%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL +HE  C HP K+G E+M  L  ++ +   E +LY+++F LL 
Sbjct:   186 CKYKRIGCPWQGPFHELSAHEAECCHPSKTGMELMGILDEMDQSHRRELQLYNSIFSLLC 245

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI F E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R + +
Sbjct:   246 FEKIGFTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLAF 305

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QLILK+K  +A+   F++L+GP+ D+K++P I    F+   NE+ Y  LP  D+ ECN+ 
Sbjct:   306 QLILKSKVNSALECSFLLLKGPYEDIKIKPVIQHHVFSNDANETEYAPLPICDSVECNKL 365

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   366 LAAKNINLRLFIFQIQK 382

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q7YR89 CYHR1 "Cysteine and histidine-rich protein 1" [Bos taurus (taxid:9913)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 96/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   115 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 174

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   175 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 234

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   235 QLLLKSKVTAPLECSFLLLKGPYDDVKISPVIYHFVFTNESNETDYVPLPIVDSVECNKL 294

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   295 LAAKNINLRLFLFQIQK 311

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RN78 CYHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 96/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   166 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 225

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   226 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 285

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   286 QLLLKSKVTAPLECSFLLLKGPYDDVKISPVIYHFVFTNESNETDYVPLPIVDSVECNKL 345

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   346 LAAKNINLRLFLFQIQK 362

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q6ZMK1 CYHR1 "Cysteine and histidine-rich protein 1" [Homo sapiens (taxid:9606)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 95/197 (48%), Positives = 137/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G+E+ME L  ++ +   E +LY+++F LLS
Sbjct:   166 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLS 225

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   226 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 285

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   286 QLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVECNKL 345

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   346 LAAKNINLRLFLFQIQK 362

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|F1RSP2 CYHR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 96/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   166 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 225

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   226 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 285

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+K+ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   286 QLLLKSKVTAPLECSFLLLKGPYEDVKISPVIYHFVFTNESNETDYVPLPIVDSVECNKL 345

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   346 LAAKNINLRLFLFQIQK 362

GO:0005737 "cytoplasm" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1859320 Cyhr1 "cysteine and histidine rich 1" [Mus musculus (taxid:10090)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 95/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   115 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 174

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   175 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 234

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   235 QLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVECNKL 294

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   295 LAAKNINLRLFLFQIQK 311

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1561328 RGD1561328 "cysteine and histidine rich 1-like" [Rattus norvegicus (taxid:10116)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 95/197 (48%), Positives = 136/197 (69%)

Query:    96 CKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLS 155
             CKY  IGCPW GP HEL  HE +CAHP K+G E+ME L  ++ +   E +LY+++F LLS
Sbjct:   115 CKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLS 174

Query:   156 YEKIIFNELQMKPYRTDEFIHKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTY 215
             +EKI + E+Q +PYRTD+FI +L+YET RF+  N  WV+KAR+N  +R+P LS  R +++
Sbjct:   175 FEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSF 234

Query:   216 QLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFNEQENESPYFILPFPDTSECNRH 275
             QL+LK+K T  +   F++L+GP+ D+++ P I+ F F  + NE+ Y  LP  D+ ECN+ 
Sbjct:   235 QLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVECNKL 294

Query:   276 LATKTINFRLIMFLASK 292
             LA K IN RL +F   K
Sbjct:   295 LAAKNINLRLFLFQIQK 311

GO:0005635 "nuclear envelope" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7YR89	CYHR1_BOVIN	No assigned EC number	0.485	0.6849	0.6430	yes	N/A
Q9VZV5	CYHR1_DROME	No assigned EC number	0.4775	0.8835	0.6262	yes	N/A
Q9QXA1	CYHR1_MOUSE	No assigned EC number	0.48	0.6849	0.6430	yes	N/A
Q08CH8	CYHR1_DANRE	No assigned EC number	0.3704	0.9691	0.7546	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
KOG3002|consensus	299		99.86
PF03145	198	Sina: Seven in absentia protein family; InterPro:	97.72
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	97.31
PF03145	198	Sina: Seven in absentia protein family; InterPro:	95.18
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	84.75
PF07800	162	DUF1644: Protein of unknown function (DUF1644); In	82.31
smart00061	95	MATH meprin and TRAF homology.	80.7

>KOG3002|consensus

Probab=99.86  E-value=1.9e-22  Score=190.53  Aligned_cols=230  Identities=16%  Similarity=0.141  Sum_probs=171.7

Q ss_pred             hccceecceeCCCCCcchhhcch-hHhH-hhh--hh-----h-------hhhcchhhhhhhhccccCeeeecccCCCCCc
Q psy5746          41 LGGILCCAVCLDLPRSAVYQMQD-FVMK-LLH--VL-----T-------VGLKSARAVHHVTLLLRKLLTTCKYSMIGCP  104 (292)
Q Consensus        41 L~~ll~C~VC~dlp~p~i~QC~~-HL~C-~~~--ll-----a-------~~L~vEk~~sH~~~~C~~r~~~CkY~~~GC~  104 (292)
                      ...+++||||+++..|||+||+| ||.| .|+  +.     .       +.+.|||++       +.+.|+|||...||+
T Consensus        45 ~~~lleCPvC~~~l~~Pi~QC~nGHlaCssC~~~~~~~CP~Cr~~~g~~R~~amEkV~-------e~~~vpC~~~~~GC~  117 (299)
T KOG3002|consen   45 DLDLLDCPVCFNPLSPPIFQCDNGHLACSSCRTKVSNKCPTCRLPIGNIRCRAMEKVA-------EAVLVPCKNAKLGCT  117 (299)
T ss_pred             chhhccCchhhccCcccceecCCCcEehhhhhhhhcccCCccccccccHHHHHHHHHH-------HhceecccccccCCc
Confidence            45699999999999999999999 9999 554  11     1       224599998       699999999999999


Q ss_pred             cccccchhhhhhhhCCCCCCChHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCCceeeeeeeeeeecccccccceeeecc
Q psy5746         105 WCGPQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKIIFNELQMKPYRTDEFIHKLFYETSR  184 (292)
Q Consensus       105 W~Gp~~e~~~HE~~C~f~~ksG~Elme~L~~~d~~~~~~~~~~~~i~~LLS~ekI~f~dLQl~Pyrtd~f~~~lfyes~r  184 (292)
                      |.+++.++..||..|.|++-+ -....+..+.+..-.....+|+..   ...+.+++.+.++++++|+........++..
T Consensus       118 ~~~~Y~~~~~HE~~C~f~~~~-CP~p~~~C~~~G~~~~l~~H~~~~---hk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (299)
T KOG3002|consen  118 KSFPYGEKSKHEKVCEFRPCS-CPVPGAECKYTGSYKDLYAHLNDT---HKSDIITLTGFDFVFVATDENLLGAATWTLK  193 (299)
T ss_pred             eeeccccccccccccccCCcC-CCCCcccCCccCcHHHHHHHHHhh---ChhhhhhccccceecccCCccccccchhhee
Confidence            999999999999999996554 223324444444444444555555   5566788999999999999999999999999


Q ss_pred             eEEecCEEEEEEEEecCCCCCCCCCcceeEEEEEEccCCCCceEEEEEEEeCCCCCCccCceeeEEEec----CCcCCCC
Q psy5746         185 FSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTTAMTVHFMVLRGPFGDMKVQPKIHKFEFN----EQENESP  260 (292)
Q Consensus       185 F~Af~~qWvvkarin~~~~~p~~s~~r~l~~qL~Lks~~~~~l~v~y~~l~gp~~d~~i~P~l~~~~F~----~~~~esp  260 (292)
                      +.++.++|..++.++...++|   ....++++.+..+++....-...+-+.|  ++.++.=......+.    ....+++
T Consensus       194 ~~~~~~~~~~~~~~~q~~~~~---~~~y~tv~~i~~~~~e~~~fsy~L~~~~--~~~klt~~s~~~s~~~kvs~~~p~~d  268 (299)
T KOG3002|consen  194 TSVCFGREFGLLFEVQCFREP---HGVYVTVNRIAPSAPEAGEFSYSLALGG--SGRKLTWQSPPRSIIQKVSKVRPEDD  268 (299)
T ss_pred             eeecCcEEEeeeeeehhhcCC---CceEEEeehhccCCCcccccceeeecCC--CCceEeecCCcceeecccceeccCCC
Confidence            999999999999999888877   4567999999999987655555555555  555544333333332    2333455


Q ss_pred             CccccCCCHHHHHHHHhccCcceEEeee
Q psy5746         261 YFILPFPDTSECNRHLATKTINFRLIMF  288 (292)
Q Consensus       261 ~~~Lpl~~~~~c~rLLa~k~i~~RL~Mf  288 (292)
                      +..||  ...++.+-+..++|.+|..++
T Consensus       269 fm~ip--~~~~~~~~~~~~~l~i~~~~~  294 (299)
T KOG3002|consen  269 FMLIP--RSLLCLFSLLKMELKIRVTGR  294 (299)
T ss_pred             ceecc--HHHhhcccccCCceeeccchh
Confidence            55554  345566666666888888774

>PF03145 Sina: Seven in absentia protein family; InterPro: IPR018121 The seven in absentia (sina) gene was first identified in Drosophila

Probab=97.72  E-value=1e-05  Score=71.61  Aligned_cols=43  Identities=26%  Similarity=0.392  Sum_probs=23.9

Q ss_pred             hcchhhhhhhhccccCeeeecccCCCCCccccccchhhhhhhhCCCCCCC
Q psy5746          76 LKSARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKS  125 (292)
Q Consensus        76 L~vEk~~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~ks  125 (292)
                      ++||+++       +...|||+|+..||.+..+++++.+||+.|.|.+-.
T Consensus         4 ~alE~v~-------~~~~~pC~~~~~GC~~~~~~~~~~~HE~~C~~~p~~   46 (198)
T PF03145_consen    4 RALEKVA-------ESIKFPCKNAKYGCTETFPYSEKREHEEECPFRPCS   46 (198)
T ss_dssp             ------------------EE-CCGGGT---EE-GGGHHHHHHT-TTSEEE
T ss_pred             HHHHHHH-------hhceecCCCCCCCCcccccccChhhHhccCCCcCCc
Confidence            4589888       589999999999999999999999999999988543

The Drosophila Sina protein is essential for the determination of the R7 pathway in photoreceptor cell development: the loss of functional Sina results in the transformation of the R7 precursor cell to a non-neuronal cell type. The Sina protein contains an N-terminal RING finger domain C3HC4-type. Through this domain, Sina binds E2 ubiquitin-conjugating enzymes (UbcD1) Sina also interacts with Tramtrack (TTK88) via PHYL. Tramtrack is a transcriptional repressor that blocks photoreceptor determination, while PHYL down-regulates the activity of TTK88. In turn, the activity of PHYL requires the activation of the Sevenless receptor tyrosine kinase, a process essential for R7 determination. It is thought that Sina targets TTK88 for degradation, therefore promoting the R7 pathway. Murine and human homologues of Sina have also been identified. The human homologue Siah-1 [] also binds E2 enzymes (UbcH5) and through a series of physical interactions, targets beta-catenin for ubiquitin degradation. Siah-1 expression is enhanced by p53, itself promoted by DNA damage. Thus this pathway links DNA damage to beta-catenin degradation [, ]. Sina proteins, therefore, physically interact with a variety of proteins. The N-terminal RING finger domain that binds ubiquitin conjugating enzymes is a C3HC4-type, and does not form part of the alignment for this family. The remainder C-terminal part is involved in interactions with other proteins, and is included in this alignment. In addition to the Drosophila protein and mammalian homologues, whose similarity was noted previously, this family also includes putative homologues from Caenorhabditis elegans, Arabidopsis thaliana.; GO: 0006511 ubiquitin-dependent protein catabolic process, 0007275 multicellular organismal development, 0005634 nucleus; PDB: 2A25_A 1K2F_B 2AN6_C.

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=97.31  E-value=7.6e-05  Score=53.79  Aligned_cols=35  Identities=29%  Similarity=0.417  Sum_probs=25.4

Q ss_pred             hhhhhhccccCeeeecccCCCCCccccccchhhhh
Q psy5746          81 AVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSH  115 (292)
Q Consensus        81 ~~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~H  115 (292)
                      ...|...+|+.++++|+|+..||.|.++..++.+|
T Consensus        26 l~~H~~~~C~~~~v~C~~~~~GC~~~~~~~~l~~H   60 (60)
T PF02176_consen   26 LDDHLENECPKRPVPCPYSPYGCKERVPREDLEEH   60 (60)
T ss_dssp             HHHHHHTTSTTSEEE-SS----S--EEEHHHHHHC
T ss_pred             HHHHHHccCCCCcEECCCCCCCCCCccchhHHhCC
Confidence            44599899999999999999999999999999888

>PF03145 Sina: Seven in absentia protein family; InterPro: IPR018121 The seven in absentia (sina) gene was first identified in Drosophila

Probab=95.18  E-value=0.0098  Score=52.68  Aligned_cols=38  Identities=24%  Similarity=0.387  Sum_probs=28.7

Q ss_pred             hhhhhhhccccCeeeecccCCCCCccccccchhhhhhhh
Q psy5746          80 RAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEES  118 (292)
Q Consensus        80 k~~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~  118 (292)
                      +...|| +.|+.++..|+.+..||.|+|+..++..|-..
T Consensus        32 ~~~~HE-~~C~~~p~~CP~~~~~C~~~G~~~~l~~Hl~~   69 (198)
T PF03145_consen   32 EKREHE-EECPFRPCSCPFPGSGCDWQGSYKELLDHLRD   69 (198)
T ss_dssp             GHHHHH-HT-TTSEEE-SSSSTT---EEECCCHHHHHHH
T ss_pred             ChhhHh-ccCCCcCCcCCCCCCCccccCCHHHHHHHHHH
Confidence            344585 99999999999999999999999999999765

The Drosophila Sina protein is essential for the determination of the R7 pathway in photoreceptor cell development: the loss of functional Sina results in the transformation of the R7 precursor cell to a non-neuronal cell type. The Sina protein contains an N-terminal RING finger domain C3HC4-type. Through this domain, Sina binds E2 ubiquitin-conjugating enzymes (UbcD1) Sina also interacts with Tramtrack (TTK88) via PHYL. Tramtrack is a transcriptional repressor that blocks photoreceptor determination, while PHYL down-regulates the activity of TTK88. In turn, the activity of PHYL requires the activation of the Sevenless receptor tyrosine kinase, a process essential for R7 determination. It is thought that Sina targets TTK88 for degradation, therefore promoting the R7 pathway. Murine and human homologues of Sina have also been identified. The human homologue Siah-1 [] also binds E2 enzymes (UbcH5) and through a series of physical interactions, targets beta-catenin for ubiquitin degradation. Siah-1 expression is enhanced by p53, itself promoted by DNA damage. Thus this pathway links DNA damage to beta-catenin degradation [, ]. Sina proteins, therefore, physically interact with a variety of proteins. The N-terminal RING finger domain that binds ubiquitin conjugating enzymes is a C3HC4-type, and does not form part of the alignment for this family. The remainder C-terminal part is involved in interactions with other proteins, and is included in this alignment. In addition to the Drosophila protein and mammalian homologues, whose similarity was noted previously, this family also includes putative homologues from Caenorhabditis elegans, Arabidopsis thaliana.; GO: 0006511 ubiquitin-dependent protein catabolic process, 0007275 multicellular organismal development, 0005634 nucleus; PDB: 2A25_A 1K2F_B 2AN6_C.

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=84.75  E-value=0.79  Score=32.74  Aligned_cols=37  Identities=24%  Similarity=0.278  Sum_probs=27.7

Q ss_pred             hhhccccCeeeecccCCCCCccccccchhhhhhh-hCCCCC
Q psy5746          84 HVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEE-SCAHPH  123 (292)
Q Consensus        84 H~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~-~C~f~~  123 (292)
                      |+.. |+.+++.|.+  -||.-..+..++..|.+ .|.+..
T Consensus         1 H~~~-C~~~~v~C~~--~cc~~~i~r~~l~~H~~~~C~~~~   38 (60)
T PF02176_consen    1 HEEE-CPFRPVPCPN--GCCNEMIPRKELDDHLENECPKRP   38 (60)
T ss_dssp             HHTT-STTSEEE-TT----S-BEEECCCHHHHHHTTSTTSE
T ss_pred             Cccc-CCCCEeeCCC--CCcccceeHHHHHHHHHccCCCCc
Confidence            5545 9999999998  56767789999999999 787753

>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function

Probab=82.31  E-value=1.1  Score=40.12  Aligned_cols=33  Identities=30%  Similarity=0.662  Sum_probs=26.9

Q ss_pred             eecccCCCCCccccccchhhhhhhhCCCCCCChHHH
Q psy5746          94 TTCKYSMIGCPWCGPQHELKSHEESCAHPHKSGAEV  129 (292)
Q Consensus        94 ~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~ksG~El  129 (292)
                      =.|-.  .||.+.|.+.|+-.|.. .+||.-...||
T Consensus       108 RsC~~--e~C~F~GtY~eLrKHar-~~HP~~rP~~v  140 (162)
T PF07800_consen  108 RSCSQ--ESCSFSGTYSELRKHAR-SEHPSARPSEV  140 (162)
T ss_pred             ccCcc--cccccccCHHHHHHHHH-hhCCCCCCccC
Confidence            34544  89999999999999976 58888888776

The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.

>smart00061 MATH meprin and TRAF homology

Probab=80.70  E-value=18  Score=26.51  Aligned_cols=66  Identities=14%  Similarity=0.140  Sum_probs=41.3

Q ss_pred             ccceeeecceEEecCEEEEEEEEecCCCCCCCCCcceeEEEEEEccCCCC----c--eEEEEEEEeCCCCCCccCceeeE
Q psy5746         176 HKLFYETSRFSAFNNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTTT----A--MTVHFMVLRGPFGDMKVQPKIHK  249 (292)
Q Consensus       176 ~~lfyes~rF~Af~~qWvvkarin~~~~~p~~s~~r~l~~qL~Lks~~~~----~--l~v~y~~l~gp~~d~~i~P~l~~  249 (292)
                      ....+.|+.|.+++..|.+++..+.          ..|+.-|.+......    +  ..+.+.|+...-...   ++-..
T Consensus        14 ~~~~~~S~~f~~~g~~W~i~~~p~~----------~~lsl~L~~~~~~~~~~~w~v~a~~~~~l~~~~~~~~---~~~~~   80 (95)
T smart00061       14 EGESYFSPSEEHFNIPWRLKIYRKN----------GFLSLYLHCEKEECDSRKWSIEAEFTLKLVSQNGKSL---SKKDK   80 (95)
T ss_pred             cCceEeCChhEEcCceeEEEEEEcC----------CEEEEEEEeCCCcCCCCCeEEEEEEEEEEEeCCCCEE---eeeee
Confidence            4568999999999999999999761          357777777555332    2  344555554332111   33345


Q ss_pred             EEecC
Q psy5746         250 FEFNE  254 (292)
Q Consensus       250 ~~F~~  254 (292)
                      +.|..
T Consensus        81 ~~F~~   85 (95)
T smart00061       81 HVFEK   85 (95)
T ss_pred             EEEcC
Confidence            66754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	292
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	98.18
3knv_A	141	TNF receptor-associated factor 2; cross-brace, alt	97.74
3hct_A	118	TNF receptor-associated factor 6; cross-brace, bet	97.69
1rmd_A	116	RAG1; V(D)J recombination, antibody, MAD, ring fin	97.66
2a25_A	193	Ubiquitin ligase SIAH1; protein-peptide complex, l	96.88
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	96.03
2yre_A	100	F-box only protein 30; zinc binding, E3 ubiquitin	95.04
1flk_A	228	TNF receptor associated factor 3; TNF signaling, T	94.63
2a25_A	193	Ubiquitin ligase SIAH1; protein-peptide complex, l	94.29
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.99
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	85.04
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	80.44
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	80.17

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=98.18  E-value=3.6e-07  Score=76.77  Aligned_cols=82  Identities=20%  Similarity=0.298  Sum_probs=57.4

Q ss_pred             cchhhHHHhhccceecceeCCCCCcchhhcch-hHhH-h--hhhhhh---------h-hc---------chhhhhhhhcc
Q psy5746          32 VKADKLEQRLGGILCCAVCLDLPRSAVYQMQD-FVMK-L--LHVLTV---------G-LK---------SARAVHHVTLL   88 (292)
Q Consensus        32 ~~~~~le~~L~~ll~C~VC~dlp~p~i~QC~~-HL~C-~--~~lla~---------~-L~---------vEk~~sH~~~~   88 (292)
                      |-+.++.+.+.+.+.|++|+++...| +|+.. |.+| .  ...+..         . +.         +++.+      
T Consensus         6 g~~~~~~~~~~~~~~C~IC~~~~~~p-v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i------   78 (170)
T 3hcs_A            6 GYDVEFDPPLESKYECPICLMALREA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREI------   78 (170)
T ss_dssp             CBCSEESSCCCGGGBCTTTCSBCSSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHH------
T ss_pred             CCChhhccCCCCCCCCCCCChhhcCc-EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHH------
Confidence            33444666788899999999999988 45778 9999 2  222221         1 11         45555      


Q ss_pred             ccCeeeecccCCCCCccccccchhhhhhhhCCCCC
Q psy5746          89 LRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPH  123 (292)
Q Consensus        89 C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~  123 (292)
                       .+..|.|++  .||.|.++..++..|+..|.|..
T Consensus        79 -~~l~v~C~n--~GC~~~~~~~~l~~H~~~C~~~~  110 (170)
T 3hcs_A           79 -LSLMVKCPN--EGCLHKMELRHLEDHQAHCEFAL  110 (170)
T ss_dssp             -HTSEEECCS--TTCCCEEEGGGHHHHHTTCTTSE
T ss_pred             -hhcccCCCC--CCCCceecHhHHHHHHhcCCcee
Confidence             367788886  48888888888888888888754

>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}

Probab=97.74  E-value=8e-06  Score=67.98  Aligned_cols=85  Identities=26%  Similarity=0.443  Sum_probs=57.2

Q ss_pred             chhhHHHhhccceecceeCCCCCcchhhcch-hHhH-h--hhhhh---------hh-h---------cchhhhh--hhhc
Q psy5746          33 KADKLEQRLGGILCCAVCLDLPRSAVYQMQD-FVMK-L--LHVLT---------VG-L---------KSARAVH--HVTL   87 (292)
Q Consensus        33 ~~~~le~~L~~ll~C~VC~dlp~p~i~QC~~-HL~C-~--~~lla---------~~-L---------~vEk~~s--H~~~   87 (292)
                      ..+.+.+.|...+.|++|+++...| +|... |..| .  ...+.         +. +         ...++..  ..+.
T Consensus        20 ~~~~~~~~l~~~~~C~IC~~~~~~p-v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~   98 (141)
T 3knv_A           20 SKTLLGTKLEAKYLCSACRNVLRRP-FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARR   98 (141)
T ss_dssp             CGGGTGGGCCGGGBCTTTCSBCSSE-EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHH
T ss_pred             chhhhhccCCcCcCCCCCChhhcCc-EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHH
Confidence            3455667888999999999999988 45666 8888 2  22221         11 1         0000000  1123


Q ss_pred             cccCeeeecccCCCCCccccccchhhh-hhhhCC
Q psy5746          88 LLRKLLTTCKYSMIGCPWCGPQHELKS-HEESCA  120 (292)
Q Consensus        88 ~C~~r~~~CkY~~~GC~W~Gp~~e~~~-HE~~C~  120 (292)
                      ...+..|.|+|  .||.|.|.+.+..+ |+..|.
T Consensus        99 ~i~~L~v~Cpn--~GC~~~~~l~~l~~~H~~~~~  130 (141)
T 3knv_A           99 EVESLPAVCPS--DGCTWKGTLKEYESCHEGRCP  130 (141)
T ss_dssp             HHHTSEEECCS--TTCCCEEEHHHHHHHTTTCCH
T ss_pred             HHcccccccCC--CCCCCEeEHHHHHHHHHHHhH
Confidence            34689999999  79999999999998 999884

>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A

Probab=97.69  E-value=9e-06  Score=64.76  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=55.9

Q ss_pred             hhHHHhhccceecceeCCCCCcchhhcch-hHhH---hhhhhh---------hh-hc---------chhhhhhhhccccC
Q psy5746          35 DKLEQRLGGILCCAVCLDLPRSAVYQMQD-FVMK---LLHVLT---------VG-LK---------SARAVHHVTLLLRK   91 (292)
Q Consensus        35 ~~le~~L~~ll~C~VC~dlp~p~i~QC~~-HL~C---~~~lla---------~~-L~---------vEk~~sH~~~~C~~   91 (292)
                      .++.+.+...+.|++|+++...|+. ... |..|   ....+.         +. +.         +++.+       ..
T Consensus         9 ~~~~~~~~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i-------~~   80 (118)
T 3hct_A            9 VEFDPPLESKYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREI-------LS   80 (118)
T ss_dssp             SCBSSCCCGGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHH-------HT
T ss_pred             hhhccCCCCCCCCCcCChhhcCeEE-CCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHH-------cc
Confidence            3355677788999999999988743 344 7777   212211         11 11         44555       57


Q ss_pred             eeeecccCCCCCccccccchhhhhhhhCCCCCC
Q psy5746          92 LLTTCKYSMIGCPWCGPQHELKSHEESCAHPHK  124 (292)
Q Consensus        92 r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~k  124 (292)
                      ..+.|.+  .||.|.|+..++.+|++.|.+-..
T Consensus        81 l~v~C~n--~gC~~~~~~~~l~~H~~~c~~~~~  111 (118)
T 3hct_A           81 LMVKCPN--EGCLHKMELRHLEDHQAHCEFALL  111 (118)
T ss_dssp             SEEECSS--TTCCCEEEGGGSGGGTSSSCC---
T ss_pred             ceeECCC--CCCCCEEeeHHHHHHHHHchhhhh
Confidence            8999996  799999999999999999988544

>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1

Probab=97.66  E-value=9.3e-06  Score=64.11  Aligned_cols=82  Identities=15%  Similarity=0.229  Sum_probs=53.1

Q ss_pred             HHhhccceecceeCCCCCcchh-hcchhHhH---hhhhhh---------hh-hcchh---hhhhhhccccCeeeecccCC
Q psy5746          38 EQRLGGILCCAVCLDLPRSAVY-QMQDFVMK---LLHVLT---------VG-LKSAR---AVHHVTLLLRKLLTTCKYSM  100 (292)
Q Consensus        38 e~~L~~ll~C~VC~dlp~p~i~-QC~~HL~C---~~~lla---------~~-L~vEk---~~sH~~~~C~~r~~~CkY~~  100 (292)
                      .+.+...+.|++|++....|+. .|. |..|   ....+.         +. +..+.   .............+.|.+. 
T Consensus        17 ~~~~~~~~~C~IC~~~~~~p~~~~Cg-H~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~-   94 (116)
T 1rmd_A           17 PAHFVKSISCQICEHILADPVETSCK-HLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPAQ-   94 (116)
T ss_dssp             CHHHHHHTBCTTTCSBCSSEEECTTS-CEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEEECCST-
T ss_pred             HHhccCCCCCCCCCcHhcCcEEcCCC-CcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHhcCCCCCC-
Confidence            3455567899999999988754 343 6666   222221         11 11110   0111123335789999996 


Q ss_pred             CCCccccccchhhhhhhhCCCC
Q psy5746         101 IGCPWCGPQHELKSHEESCAHP  122 (292)
Q Consensus       101 ~GC~W~Gp~~e~~~HE~~C~f~  122 (292)
                       ||.|.++..+...|+..|...
T Consensus        95 -gC~~~~~~~~~~~H~~~C~~~  115 (116)
T 1rmd_A           95 -DCNEEVSLEKYNHHVSSHKES  115 (116)
T ss_dssp             -TCCCEEEHHHHHHHHHTSCCC
T ss_pred             -CCcchhhHhHHHHHHHHhhcc
Confidence             999999999999999999874

>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A

Probab=96.88  E-value=0.00016  Score=63.08  Aligned_cols=35  Identities=34%  Similarity=0.609  Sum_probs=1.2

Q ss_pred             cCeeeecccCCCCCccccccchhhhhhhhCCCCCC
Q psy5746          90 RKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHK  124 (292)
Q Consensus        90 ~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~k  124 (292)
                      +...+||+|+..||.+..+++++..||+.|.|++-
T Consensus         3 ~s~~~pC~~~~~GC~~~~~y~~~~~He~~C~f~p~   37 (193)
T 2a25_A            3 NSVLFPCKYASSGCEITLPHTEKADHEELCEFRPY   37 (193)
T ss_dssp             ---------------------------------CE
T ss_pred             cceEecCCCCCCCCCcccccccccchhhcCCCCCc
Confidence            46788999999999999999999999998888765

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=96.03  E-value=0.0024  Score=46.79  Aligned_cols=39  Identities=21%  Similarity=0.326  Sum_probs=34.6

Q ss_pred             hhhhccccCeeeecccCCCCCccccccchhhhhhhhCCCCCCC
Q psy5746          83 HHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHPHKS  125 (292)
Q Consensus        83 sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~ks  125 (292)
                      .|...+|+.|++.|+|    |.+..+..++..|++.|......
T Consensus        34 ~H~~~~C~~r~v~C~~----C~~~~~~~~l~~H~~~Cp~~~v~   72 (76)
T 2yuc_A           34 AHLQHDCPKRRLKCEF----CGCDFSGEAYESHEGMCPQESSG   72 (76)
T ss_dssp             TTTTTSCTTSCCCCSS----SCCCCCHHHHHHTTTSCTTSSCC
T ss_pred             hhCHhhCCCcceECCC----CCCccCHHHHHHHHhHCCCCccC
Confidence            4888899999999999    99999999999999999876543

>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.04  E-value=0.0097  Score=48.00  Aligned_cols=41  Identities=29%  Similarity=0.468  Sum_probs=36.1

Q ss_pred             hhhhhhccccCeeeecccCCCCCccccccchhhhhhhhCCCC
Q psy5746          81 AVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAHP  122 (292)
Q Consensus        81 ~~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~  122 (292)
                      +-.|. ..|+...++|.|+..||+.++.-.++.+||++|.-.
T Consensus        53 L~EH~-~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas   93 (100)
T 2yre_A           53 ADEHR-LLCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPAS   93 (100)
T ss_dssp             HHHHH-HHCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGG
T ss_pred             HHHHH-hhcccccccccccCcCCceeecHHHHHHHHhhCCce
Confidence            33475 669999999999999999999999999999999643

>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A

Probab=94.63  E-value=0.088  Score=46.42  Aligned_cols=135  Identities=10%  Similarity=0.060  Sum_probs=58.1

Q ss_pred             CeeeecccCCCCCcccc-----ccchhhhhhhhCCCCCCChHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCCc-eeeee
Q psy5746          91 KLLTTCKYSMIGCPWCG-----PQHELKSHEESCAHPHKSGAEVMESLQAIETTKDIEKRLYDNLFELLSYEKI-IFNEL  164 (292)
Q Consensus        91 ~r~~~CkY~~~GC~W~G-----p~~e~~~HE~~C~f~~ksG~Elme~L~~~d~~~~~~~~~~~~i~~LLS~ekI-~f~dL  164 (292)
                      -..+.|+|...||...+     +..++..|.+.-.      ..=++.+...=...+.+.......+..|..... .....
T Consensus         7 ~~~i~c~~~~~gc~~~~~~~~~~r~~~~~h~~~~~------~~h~~~~~~~i~~~~~~i~~~~~~l~~l~~~~~~g~~~w   80 (228)
T 1flk_A            7 ADSMKSSVESLQNRVTELESVDKSAGQVARNTGLL------ESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW   80 (228)
T ss_dssp             -----------------CTTTTTTTTTHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE
T ss_pred             hhheeccccccCceeeccccccchhHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCcEEEE
Confidence            35788999999999999     9999999987610      111222222222223333333333333333211 01112


Q ss_pred             eeeee-ec-cccccc--ceeeecceEEe--cCEEEEEEEEecCCCCCCCCCcceeEEEEEEccCCC-------CceEEEE
Q psy5746         165 QMKPY-RT-DEFIHK--LFYETSRFSAF--NNQWVVKARINTCQRDPTLSSDREMTYQLILKTKTT-------TAMTVHF  231 (292)
Q Consensus       165 Ql~Py-rt-d~f~~~--lfyes~rF~Af--~~qWvvkarin~~~~~p~~s~~r~l~~qL~Lks~~~-------~~l~v~y  231 (292)
                      .+.-| ++ ++....  .++.|+.|.+=  +..|.+++..|.+..    +....|+.-|.|-+...       -.-.+++
T Consensus        81 kI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~----~~~~~lSlyL~l~~~~~d~~l~Wp~~a~~~l  156 (228)
T 1flk_A           81 KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM----GKGTHLSLFFVIMRGEYDALLPWPFKQKVTL  156 (228)
T ss_dssp             EEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGG----GTTTEEEEEECCBCCTTTTSSCSSCCCCEEE
T ss_pred             EECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCC----CCCCEEEEEEEEecCCccccCCCcEEEEEEE
Confidence            22222 01 111111  37889999998  899999999885421    12245777777654332       1245666


Q ss_pred             EEEe
Q psy5746         232 MVLR  235 (292)
Q Consensus       232 ~~l~  235 (292)
                      .|++
T Consensus       157 ~lld  160 (228)
T 1flk_A          157 MLMD  160 (228)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            6665

>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A

Probab=94.29  E-value=0.015  Score=50.65  Aligned_cols=36  Identities=19%  Similarity=0.313  Sum_probs=22.5

Q ss_pred             hhhhhccccCeeeecccCCCCCccccccchhhhhhhh
Q psy5746          82 VHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEES  118 (292)
Q Consensus        82 ~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~  118 (292)
                      ..|| +.|..++..|.++..+|.|+|...++..|-..
T Consensus        26 ~~He-~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~   61 (193)
T 2a25_A           26 ADHE-ELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH   61 (193)
T ss_dssp             -----------CEECCCC--CCCCEECSTTHHHHHHH
T ss_pred             cchh-hcCCCCCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence            3486 68999999999987779999999999999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.99  E-value=0.15  Score=42.24  Aligned_cols=42  Identities=14%  Similarity=0.201  Sum_probs=34.4

Q ss_pred             chhhhhhhhccccCeeeecccCCCCCccccccchhhhhh-hhCCCCCC
Q psy5746          78 SARAVHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHE-ESCAHPHK  124 (292)
Q Consensus        78 vEk~~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE-~~C~f~~k  124 (292)
                      .+...+|+ ..|+.+++.|+    ||.|.++..++.+|. ..|.++..
T Consensus        96 ~~~l~~H~-~~C~~~~v~C~----~C~~~~~r~~l~~H~~~~C~~r~~  138 (170)
T 3hcs_A           96 LRHLEDHQ-AHCEFALMDCP----QCQRPFQKFHINIHILKDCPRRQV  138 (170)
T ss_dssp             GGGHHHHH-TTCTTSEEECT----TTCCEEEGGGHHHHHHHTCTTCEE
T ss_pred             HhHHHHHH-hcCCceeeECC----CCChHHHHHHHHHHhhhhCCCCCe
Confidence            45555686 89999999996    999999999999998 47887754

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=85.04  E-value=0.43  Score=34.55  Aligned_cols=39  Identities=18%  Similarity=0.343  Sum_probs=34.2

Q ss_pred             hhhhccccCeeeecccCCCCCccccccchhhhhhh-hCCCCCCC
Q psy5746          83 HHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEE-SCAHPHKS  125 (292)
Q Consensus        83 sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~-~C~f~~ks  125 (292)
                      .|+ ..|+.++|.|..   ||....+..++..|.+ .|.++..+
T Consensus         7 ~H~-~~C~~~~v~C~~---~C~~~v~r~~l~~H~~~~C~~r~v~   46 (76)
T 2yuc_A            7 GHL-NTCSFNVIPCPN---RCPMKLSRRDLPAHLQHDCPKRRLK   46 (76)
T ss_dssp             CCC-CCCCCSCCBCTT---CCSCBCCSSSSTTTTTTSCTTSCCC
T ss_pred             HHH-HHCCCcccCCCc---cccHHhhHhHHHhhCHhhCCCcceE
Confidence            376 899999999975   8999999999999999 78888655

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.44  E-value=0.47  Score=34.33  Aligned_cols=33  Identities=24%  Similarity=0.339  Sum_probs=25.1

Q ss_pred             hhhccccCeeeecccCCCCCccccccchhhhhhhhCCC
Q psy5746          84 HVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAH  121 (292)
Q Consensus        84 H~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f  121 (292)
                      |+ ..|+.+++.|.+    |.......++..|..+|.-
T Consensus        35 H~-~~c~~~~~~C~~----C~~~~~~~~l~~H~~~c~~   67 (75)
T 2d9k_A           35 HE-DYCGARTELCGN----CGRNVLVKDLKTHPEVCGR   67 (75)
T ss_dssp             HH-HHHHHCEEECSS----SCCEEETTGGGTHHHHBTT
T ss_pred             HH-hHcCCCceEccc----CCCcCcHHHHHHHHHHccC
Confidence            76 678888888876    7777777888888887754

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.17  E-value=0.53  Score=34.04  Aligned_cols=34  Identities=26%  Similarity=0.375  Sum_probs=29.5

Q ss_pred             hhhccccCeeeecccCCCCCccccccchhhhhhhhCCC
Q psy5746          84 HVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESCAH  121 (292)
Q Consensus        84 H~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f  121 (292)
                      |....|+.+++.|.|    |.......++..|+..|..
T Consensus         8 H~~~~c~~r~~~C~~----C~~~~~~~~L~~H~~~c~~   41 (75)
T 2d9k_A            8 HEETECPLRLAVCQH----CDLELSILKLKEHEDYCGA   41 (75)
T ss_dssp             CCCCCCCCCCEECSS----SCCEECHHHHHHHHHHHHH
T ss_pred             hCcccCCCcccCCcc----cChHhhHHHHHHHHhHcCC
Confidence            877899999999997    8888899999999977643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	292
d1k2fa_	190	SIAH, seven in absentia homolog {Mouse (Mus muscul	97.45
d1k2fa_	190	SIAH, seven in absentia homolog {Mouse (Mus muscul	95.66

>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: TRAF domain-like
superfamily: TRAF domain-like
family: SIAH, seven in absentia homolog
domain: SIAH, seven in absentia homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=1.7e-05  Score=67.01  Aligned_cols=32  Identities=38%  Similarity=0.680  Sum_probs=30.1

Q ss_pred             eeeecccCCCCCccccccchhhhhhhhCCCCC
Q psy5746          92 LLTTCKYSMIGCPWCGPQHELKSHEESCAHPH  123 (292)
Q Consensus        92 r~~~CkY~~~GC~W~Gp~~e~~~HE~~C~f~~  123 (292)
                      +.|||||+..||.|..|+.++.+||+.|.|.+
T Consensus         2 v~~pC~~~~~GC~~~~~~~~~~~HE~~C~~~p   33 (190)
T d1k2fa_           2 VLFPCKYASSGCEITLPHTEKAEHEELCEFRP   33 (190)
T ss_dssp             CCCCCTTGGGTCCCCCCGGGHHHHHHTCTTSC
T ss_pred             eeEecCCCCCCCCEeccccchhhHHhcCCCcc
Confidence            67999999999999999999999999999976

>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: TRAF domain-like
superfamily: TRAF domain-like
family: SIAH, seven in absentia homolog
domain: SIAH, seven in absentia homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.66  E-value=0.0018  Score=54.23  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=33.4

Q ss_pred             hhhhhccccCeeeecccCCCCCccccccchhhhhhhhC
Q psy5746          82 VHHVTLLLRKLLTTCKYSMIGCPWCGPQHELKSHEESC  119 (292)
Q Consensus        82 ~sH~~~~C~~r~~~CkY~~~GC~W~Gp~~e~~~HE~~C  119 (292)
                      ..|| ++|..+++.|.++..||.|+|...++..|-..+
T Consensus        23 ~~HE-~~C~~~p~~C~~~~~~C~~~G~~~~l~~Hl~~~   59 (190)
T d1k2fa_          23 AEHE-ELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ   59 (190)
T ss_dssp             HHHH-HTCTTSCEECCSSSTTCCCEECHHHHHHHHHHS
T ss_pred             hhHH-hcCCCcccCCCCCCCCCccCCCHhHHHHHHHhc
Confidence            3485 789999999999999999999999999998874